HHsearch alignment for GI: 254780129 and conserved domain: PRK02362

>PRK02362 ski2-like helicase; Provisional.
Probab=99.78  E-value=9.1e-18  Score=121.18  Aligned_cols=166  Identities=23%  Similarity=0.174  Sum_probs=112.5

Q ss_pred             CCCHHHHHHHHH-HHHCCCCEEEECCCCCHHHHHHH-HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             134899999999-99679819996899988999999-9999974089948997233101378899998515534606998
Q gi|254780129|r    4 VLKPHQIVMVNW-LLSHDRCALWASMGSGKTVSVLF-ALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSS   81 (220)
Q Consensus         4 ~Lrp~Q~~a~~~-~~~~~~~~l~~~~G~GKT~~ai~-~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~   81 (220)
T Consensus        23 ~Lyp~Q~eal~~gl~~g~NlvvsaPTgsGKTlvAElail~~l~--~g~k~vYi~P~kALa~EK~~~~~~~~-~~gi~V~~   99 (736)
T PRK02362         23 ELYPPQAEAVEAGLLEGKNLLAAIPTASGKTLLAELAMLKAIA--EGGKALYIVPLRALASEKFEEFSEFS-ELGLRVGI   99 (736)
T ss_pred             CCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHH--HCCEEEEECCHHHHHHHHHHHHHHHH-CCCCEEEE
T ss_conf             5789999999864356981899799998589999999999998--39979998587999999999999874-57998999


Q ss_pred             EECCCCCCCCCCCCCCCEEEECHHHHHCCCCCC-CCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHC-CCCEEEE
Q ss_conf             611210112234567662786566731000000-00247200002512201365433203699999998513-7987998
Q gi|254780129|r   82 LIGSERQRIKALNTPAHLYIINFENIPWLVKMK-LDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFS-KVKRFIE  159 (220)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~-~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~-~~~~~l~  159 (220)
T Consensus       100 ~tGd~~~~~~~-l~~~dIiV~T~EK~dsl~r~~~~~l~~v~lVViDEiHli~d~--~RG~~lE~~lskl~~~~~~iqiIg  176 (736)
T PRK02362        100 STGDYDRRDEY-LGRNDIIVATSEKTDSLLRNGAPWIDDISCVVADEVHLIDSP--NRGPTLEVTLAKLRRLNPDMQVIA  176 (736)
T ss_pred             EECCCCCCHHH-CCCCCEEEECHHHHHHHHHCCCHHHHCCCEEEEECCEEECCC--CCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             80898878314-368999999979999998448167650898998176786688--724999999999973387743898


Q ss_pred             ECCCCCCCCHHHHHHHHHHHC
Q ss_conf             316532488899999999828
Q gi|254780129|r  160 LTGTPSPNGLIDLWGQIWFLD  180 (220)
Q Consensus       160 LTgTPi~n~~~el~~ll~~l~  180 (220)
T Consensus       177 LSAT-l~-N~~~l---a~WL~  192 (736)
T PRK02362        177 LSAT-IG-NADEL---AAWLD  192 (736)
T ss_pred             EECC-CC-CHHHH---HHHHC
T ss_conf             6245-58-99999---99838