HHsearch alignment for GI: 254780129 and conserved domain: PRK05563
>PRK05563 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.82 E-value=0.0003 Score=43.52 Aligned_cols=127 Identities=18% Similarity=0.209 Sum_probs=60.3
Q ss_pred CCCEEEE-CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 9819996-899988999999999997408994899723310137889999851553460699861121011223456766
Q gi|254780129|r 20 DRCALWA-SMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGSERQRIKALNTPAH 98 (220)
Q Consensus 20 ~~~~l~~-~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (220)
T Consensus 38 ~hayLf~GprG~GKTs~Ari~akalnc~~~~-~--~~pC~~C~~--C~~i~---~g~~~Dv~Eidaas~~g--------- 100 (541)
T PRK05563 38 AHAYLFCGTRGTGKTSTAKIFAKAVNCLNPQ-D--GEPCNECEI--CKKIN---EGLLMDVIEIDAASNNG--------- 100 (541)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCCCCC-C--CCCCCCCHH--HHHHH---CCCCCCEEEECCCCCCC---------
T ss_conf 2045303879958999999999995799988-8--985751488--99985---68988736624444478---------
Q ss_pred EEEECHHHHHC---CCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH-HHHHH
Q ss_conf 27865667310---000000024720000251220136543320369999999851379879983165324888-99999
Q gi|254780129|r 99 LYIINFENIPW---LVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGTPSPNGL-IDLWG 174 (220)
Q Consensus 99 ~~i~~~~~l~~---~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTgTPi~n~~-~el~~ 174 (220)
T Consensus 101 -----vd~iR~~~~~~~~~p~~~~~Kv~IiDEvhmls-------~~a~nallKtlEePp~~~~Filatte~~ki~~tI~S 168 (541)
T PRK05563 101 -----VDDIREIIENVKYPPQEGKYKVYIMDEVHMLS-------QGAVNAFLKTLEEPPSNVIFILATTDPQKLPITILS 168 (541)
T ss_pred -----HHHHHHHHHHCEECCCCCCEEEEEEECCCCCC-------HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHH
T ss_conf -----89999999761048767870599997723389-------999999999985487775699976984427455674
Q ss_pred H
Q ss_conf 9
Q gi|254780129|r 175 Q 175 (220)
Q Consensus 175 l 175 (220)
T Consensus 169 R 169 (541)
T PRK05563 169 R 169 (541)
T ss_pred H
T ss_conf 2