HHsearch alignment for GI: 254780129 and conserved domain: PRK05595
>PRK05595 replicative DNA helicase; Provisional.
Probab=95.70 E-value=0.13 Score=28.50 Aligned_cols=140 Identities=13% Similarity=0.066 Sum_probs=62.4
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEE--EECCCCCCCCC---CCCC
Q ss_conf 199968999889999999999974089948997233101378899998515534606998--61121011223---4567
Q gi|254780129|r 22 CALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSS--LIGSERQRIKA---LNTP 96 (220)
Q Consensus 22 ~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~ 96 (220)
T Consensus 204 iiiaaRP~mGKTa~alnia~~~a~~~g~~V~~fSlEMs~~ql~~R~ls~~s~i~~~~i~~g~l~~~~~~~~~~a~~~l~~ 283 (444)
T PRK05595 204 ILIAARPSMGKTTFALNIAEYAALREGKSVVIFSLEMSKEQLAYKLLCSEANVDMLRLRTGNLEDKDWENIARASGPLAA 283 (444)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 99985798980799999999999866993799958899999999999964698844232689799999999999999854
Q ss_pred CCEEEE-----CHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC-----HHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 662786-----566731000000002472000025122013654332-----03699999998513798799831
Q gi|254780129|r 97 AHLYII-----NFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQ-----GTKQTRALGKVAFSKVKRFIELT 161 (220)
Q Consensus 97 ~~~~i~-----~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~-----~~k~~k~l~~~~~~~~~~~l~LT 161 (220)
T Consensus 284 ~~l~i~d~~~~ti~~i~~~~r~~~~~~~~~liiiDYlqLi~~~~~~~~r~~ev~~isr~LK~lAkel~ipvi~ls 358 (444)
T PRK05595 284 AKIYIDDTAGVSVMEMRSKCRRLKIEHGIDLILIDYLQLMSGGKSSESRQQEVSEISRSIKALAKEMECPVIALS 358 (444)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_conf 897054899964899999999999873999899823763578988888999999999999999999699799970