HHsearch alignment for GI: 254780129 and conserved domain: PRK05636

>PRK05636 replicative DNA helicase; Provisional.
Probab=94.65  E-value=0.3  Score=26.31  Aligned_cols=139  Identities=14%  Similarity=0.089  Sum_probs=62.5

Q ss_pred             CEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH-HHHHHCCCCCCEEE--EEECCCCCCCC-C--CCC
Q ss_conf             199968999889999999999974089948997233101378899-99851553460699--86112101122-3--456
Q gi|254780129|r   22 CALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKD-EVERWSAFSDMTVS--SLIGSERQRIK-A--LNT   95 (220)
Q Consensus        22 ~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~-e~~~~~~~~~~~~~--~~~~~~~~~~~-~--~~~   95 (220)
T Consensus       270 iIiAARPsmGKTalAlnia~n~A~~~g~~v~~fSL-EMs~~ql~~Rlla~~s~V~~~~ir~g~l~~~~~~~l~~a~~~l~  348 (507)
T PRK05636        270 IIVAARPGVGKSTIALDFMRSASIKNNKASVIFSL-EMSKSEIVMRLLSAEAEVRLADMRGGKMDEDAWEKLVQRLGKIA  348 (507)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEC-CCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf             99973787866899999999999876993799715-69989999999998479887888558878899999999999986


Q ss_pred             CCCEEEE-----CHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCC-----CHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             7662786-----56673100000000247200002512201365433-----203699999998513798799831
Q gi|254780129|r   96 PAHLYII-----NFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTH-----QGTKQTRALGKVAFSKVKRFIELT  161 (220)
Q Consensus        96 ~~~~~i~-----~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~-----~~~k~~k~l~~~~~~~~~~~l~LT  161 (220)
T Consensus       349 ~~pl~IdD~~~lti~~Ira~aRrlk~~~~l~livVDYLQLm~~~~~~~~R~~ev~~ISr~LK~lAkel~vpVi~Ls  424 (507)
T PRK05636        349 QAPIFIDDSANLTMMEIRSKARRLKQKHDLKMIVVDYLQLMSSGKRVESRQQEVSEFSRQLKLLAKELDVPLIAIS  424 (507)
T ss_pred             HCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_conf             1988998499976999999999998617999899845884568888766899999999999999999799889971