HHsearch alignment for GI: 254780129 and conserved domain: PRK05636
>PRK05636 replicative DNA helicase; Provisional.
Probab=94.65 E-value=0.3 Score=26.31 Aligned_cols=139 Identities=14% Similarity=0.089 Sum_probs=62.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH-HHHHHCCCCCCEEE--EEECCCCCCCC-C--CCC
Q ss_conf 199968999889999999999974089948997233101378899-99851553460699--86112101122-3--456
Q gi|254780129|r 22 CALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKD-EVERWSAFSDMTVS--SLIGSERQRIK-A--LNT 95 (220)
Q Consensus 22 ~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~-e~~~~~~~~~~~~~--~~~~~~~~~~~-~--~~~ 95 (220)
T Consensus 270 iIiAARPsmGKTalAlnia~n~A~~~g~~v~~fSL-EMs~~ql~~Rlla~~s~V~~~~ir~g~l~~~~~~~l~~a~~~l~ 348 (507)
T PRK05636 270 IIVAARPGVGKSTIALDFMRSASIKNNKASVIFSL-EMSKSEIVMRLLSAEAEVRLADMRGGKMDEDAWEKLVQRLGKIA 348 (507)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEC-CCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 99973787866899999999999876993799715-69989999999998479887888558878899999999999986
Q ss_pred CCCEEEE-----CHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCC-----CHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 7662786-----56673100000000247200002512201365433-----203699999998513798799831
Q gi|254780129|r 96 PAHLYII-----NFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTH-----QGTKQTRALGKVAFSKVKRFIELT 161 (220)
Q Consensus 96 ~~~~~i~-----~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~-----~~~k~~k~l~~~~~~~~~~~l~LT 161 (220)
T Consensus 349 ~~pl~IdD~~~lti~~Ira~aRrlk~~~~l~livVDYLQLm~~~~~~~~R~~ev~~ISr~LK~lAkel~vpVi~Ls 424 (507)
T PRK05636 349 QAPIFIDDSANLTMMEIRSKARRLKQKHDLKMIVVDYLQLMSSGKRVESRQQEVSEFSRQLKLLAKELDVPLIAIS 424 (507)
T ss_pred HCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_conf 1988998499976999999999998617999899845884568888766899999999999999999799889971