HHsearch alignment for GI: 254780129 and conserved domain: PRK05896
>PRK05896 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.52 E-value=0.00096 Score=40.65 Aligned_cols=127 Identities=15% Similarity=0.159 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHCC---CCEEEE-CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 9999999999679---819996-899988999999999997408994899723310137889999851553460699861
Q gi|254780129|r 8 HQIVMVNWLLSHD---RCALWA-SMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLI 83 (220)
Q Consensus 8 ~Q~~a~~~~~~~~---~~~l~~-~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~ 83 (220)
T Consensus 23 ~iv~~L~nAI~~~RiaHAYLFsGPrGvGKTTlArifAkaLnC~~~~~~-dpCg~--C~-----sC~~I~~g~h~DviEId 94 (613)
T PRK05896 23 LIKKILVNAILNNKLTHAYIFSGPRGIGKTSIAKIFAKAINCLNPKDG-DCCNS--CS-----VCESINTNQSVDIVELD 94 (613)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC-CCCCC--CH-----HHHHHHCCCCCCEEEEE
T ss_conf 999999999984997622775589984889999999999669999999-98888--87-----89998569999868840
Q ss_pred CCCCCCCCCCCCCCCEEEECHHHHHCCC---CCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 1210112234567662786566731000---0000024720000251220136543320369999999851379879983
Q gi|254780129|r 84 GSERQRIKALNTPAHLYIINFENIPWLV---KMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIEL 160 (220)
Q Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~l~~~~---~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~L 160 (220)
T Consensus 95 aasn~--------------gIDeIReLie~~~~~P~~gkyKV~IIDEah~Ln-------~~AaNALLKtLEEPP~~viFI 153 (613)
T PRK05896 95 AASNN--------------GVDEIRNIIDNINYLPTTFKYKVYIIDEAHMLS-------TSAWNALLKTLEEPPKHVVFI 153 (613)
T ss_pred CCCCC--------------CHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCC-------HHHHHHHHHHCCCCCCCCEEE
T ss_conf 65557--------------889999999970858757994599981622179-------999999998534898783799
Q ss_pred CCC
Q ss_conf 165
Q gi|254780129|r 161 TGT 163 (220)
Q Consensus 161 TgT 163 (220)
T Consensus 154 L~T 156 (613)
T PRK05896 154 FAT 156 (613)
T ss_pred EEE
T ss_conf 982