HHsearch alignment for GI: 254780129 and conserved domain: PRK08074

>PRK08074 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.

Probab=98.79  E-value=7.5e-08  Score=64.24  Aligned_cols=66  Identities=18%  Similarity=0.192  Sum_probs=42.9

Q ss_pred             CCCCHHHHHHHHHHH----HCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH-HHHH
Q ss_conf             713489999999999----67981999689998899999999999740899489972331013788-9999
Q gi|254780129|r    3 LVLKPHQIVMVNWLL----SHDRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVW-KDEV   68 (220)
Q Consensus         3 ~~Lrp~Q~~a~~~~~----~~~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W-~~e~   68 (220)
T Consensus       257 ye~R~~Q~~ma~~V~~al~~~~~l~iEApTGtGKTlaYLlPai~~A~~~~~~vvIST~T~~LQ~QL~~kdl  327 (932)
T PRK08074        257 YEKREGQQEMMKEVYTALRDSRHALIEAGTGTGKTLAYLLPAAYFAKKKEEPVIISTYTVQLQQQLLEKDI  327 (932)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH
T ss_conf             87587899999999999853884799868888713687999999999759909999162889999998689