HHsearch alignment for GI: 254780129 and conserved domain: PRK08181
>PRK08181 transposase; Validated.
Probab=90.77 E-value=0.51 Score=25.02 Aligned_cols=45 Identities=18% Similarity=0.169 Sum_probs=31.7
Q ss_pred HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf 9999679819996899988999999999997408994899723310
Q gi|254780129|r 14 NWLLSHDRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRV 59 (220)
Q Consensus 14 ~~~~~~~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~ 59 (220)
T Consensus 101 ~fi~~~~Nvil~Gp~GtGKThLA~Alg~~A~~~-G~~V~f~~~~~L 145 (269)
T PRK08181 101 SWLAKGANLLLFGPPGGGKSHLAAAIGLALIEN-GWRVLFTRTTDL 145 (269)
T ss_pred HHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHC-CCEEEEEEHHHH
T ss_conf 588648708998999987889999999999987-993999789999