HHsearch alignment for GI: 254780129 and conserved domain: PRK08451
>PRK08451 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.39 E-value=0.0028 Score=37.94 Aligned_cols=139 Identities=15% Similarity=0.136 Sum_probs=59.5
Q ss_pred HHHHHHHHHCC---CCEEEEC-CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 99999999679---8199968-9998899999999999740899489972331013788999985155346069986112
Q gi|254780129|r 10 IVMVNWLLSHD---RCALWAS-MGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGS 85 (220)
Q Consensus 10 ~~a~~~~~~~~---~~~l~~~-~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~~~~~ 85 (220)
T Consensus 23 v~~L~nAi~~~Rl~HAYLFsGPrGvGKTt~ArifAkaLnC~~~~~~---~PCg~C~s-C~-~i~~---g~hpDViEiDaa 94 (523)
T PRK08451 23 SKTLSLALDNNRLAHAYLFSGLRGSGKTSSARIFSRALVCEQGPSS---TPCGTCAQ-CQ-AALE---GRHIDIIEMDAA 94 (523)
T ss_pred HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC---CCCCCCHH-HH-HHHC---CCCCCEEEECCC
T ss_conf 9999999985996715875789986889999999999759999998---98887888-99-9864---899985510553
Q ss_pred CCCCCCCCCCCCCEEEECHHHHHCCCC---CCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 101122345676627865667310000---00002472000025122013654332036999999985137987998316
Q gi|254780129|r 86 ERQRIKALNTPAHLYIINFENIPWLVK---MKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTG 162 (220)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~~l~~~~~---~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LTg 162 (220)
T Consensus 95 sn~--------------gID~IReLie~~~~~P~~gryKV~IIDEah~Lt-------~~A~NALLKTLEEPP~~vvFILa 153 (523)
T PRK08451 95 SNR--------------GIDDIRNLIEQTKYKPSMARFKIFIIDEVHMLT-------KEAFNALLKTLEEPPSYVKFILA 153 (523)
T ss_pred CCC--------------CHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC-------HHHHHHHHHHCCCCCCCCEEEEE
T ss_conf 336--------------899999999972358867972799982603048-------99999999970389878379997
Q ss_pred CCCCCC-HHHHHHHHH
Q ss_conf 532488-899999999
Q gi|254780129|r 163 TPSPNG-LIDLWGQIW 177 (220)
Q Consensus 163 TPi~n~-~~el~~ll~ 177 (220)
T Consensus 154 TTep~KLp~TIlSRCQ 169 (523)
T PRK08451 154 TTDPLKLPATILSRTQ 169 (523)
T ss_pred CCCHHHCHHHHHHHHH
T ss_conf 5994768488874203