HHsearch alignment for GI: 254780129 and conserved domain: PRK08506
>PRK08506 replicative DNA helicase; Provisional.
Probab=92.13 E-value=0.81 Score=23.84 Aligned_cols=139 Identities=13% Similarity=0.069 Sum_probs=63.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH-HHHHHHHCCCCCCEEEEE--ECCCCCCCCC---CCC
Q ss_conf 1999689998899999999999740899489972331013788-999985155346069986--1121011223---456
Q gi|254780129|r 22 CALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVW-KDEVERWSAFSDMTVSSL--IGSERQRIKA---LNT 95 (220)
Q Consensus 22 ~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W-~~e~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~ 95 (220)
T Consensus 196 iIIAARPsmGKTAfAlniA~~~a-~~~~~V~~FSL-EMs~~ql~~Rlls~~s~V~~~~lr~g~l~~~e~~~~~~a~~~l~ 273 (473)
T PRK08506 196 IIIAARPSMGKTTLVLNMVLKAL-NQGKGVAFFSL-EMPAEQLMLRMLSAKTSIPLQNLRTGDLDDDEWENLSDACDELS 273 (473)
T ss_pred EEEECCCCCCHHHHHHHHHHHHH-HCCCCEEEEEC-CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99950799867899999999999-65996589822-47999999999997288783100068999999999999999986
Q ss_pred CCCEEEE-----CHHHHHCCCCCCCC-CCCCCCCCCCHHHCCCCCCCCC-----HHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 7662786-----56673100000000-2472000025122013654332-----036999999985137987998316
Q gi|254780129|r 96 PAHLYII-----NFENIPWLVKMKLD-HWDFATIVVDESTKLKSFRTHQ-----GTKQTRALGKVAFSKVKRFIELTG 162 (220)
Q Consensus 96 ~~~~~i~-----~~~~l~~~~~~~~~-~~~~~~iIiDEaH~~kn~~~~~-----~~k~~k~l~~~~~~~~~~~l~LTg 162 (220)
T Consensus 274 ~~~l~IdD~~~lti~~Ira~~Rr~k~~~~~l~livIDYLQLm~~~~~~~~R~~ev~~ISr~LK~lAkEl~vPViaLSQ 351 (473)
T PRK08506 274 QKKLFVYDSGYVNIHQVRAQLRKLKSQHPEIGLAVIDYLQLMSGSKNFKDRHLQISEISRGLKLLARELDIPIIALSQ 351 (473)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 598899889999999999999999997699878996367554688875308899999999999999996997999703