HHsearch alignment for GI: 254780129 and conserved domain: PRK09751
>PRK09751 putative ATP-dependent helicase Lhr; Provisional.
Probab=99.33 E-value=1e-11 Score=86.51 Aligned_cols=149 Identities=20% Similarity=0.288 Sum_probs=93.0
Q ss_pred EECCCCCHHHHHH-HHHHHHHHCC-----------CCCEEEEECCCCCHHHHHHHHH-----------HH-CCCCCCEEE
Q ss_conf 9689998899999-9999997408-----------9948997233101378899998-----------51-553460699
Q gi|254780129|r 25 WASMGSGKTVSVL-FALSTIKILD-----------PRPVLIIAPLRVAQYVWKDEVE-----------RW-SAFSDMTVS 80 (220)
Q Consensus 25 ~~~~G~GKT~~ai-~~~~~~~~~~-----------~~~~LIi~P~s~~~~~W~~e~~-----------~~-~~~~~~~~~ 80 (220)
T Consensus 2 vAPTGSGKTLAAFL~aLd~L~~~~~~~~~~~~~~~~~~VLYISPLKALa~Dv~rNL~~PL~gI~~~~~~~g~~~~~i~V~ 81 (1490)
T PRK09751 2 IAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 81 (1490)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf 59887439899999999999961455555567889738999592788899999999879988899998625678997586
Q ss_pred EEECCCC--CCCCCCCCCCCEEEECHHHHHCCCCCC--CCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHC--CC
Q ss_conf 8611210--112234567662786566731000000--00247200002512201365433203699999998513--79
Q gi|254780129|r 81 SLIGSER--QRIKALNTPAHLYIINFENIPWLVKMK--LDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFS--KV 154 (220)
Q Consensus 81 ~~~~~~~--~~~~~~~~~~~~~i~~~~~l~~~~~~~--~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~--~~ 154 (220)
T Consensus 82 vRtGDT~~~eR~r~~r~PPdILITTPESL~LlLtsk~r~~L~~v~~VIVDEiHalags--KRGahLaLsLeRL~~l~~~~ 159 (1490)
T PRK09751 82 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGS--KRGAHLALSLERLDALLHTS 159 (1490)
T ss_pred EECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCC--CCHHHHHHHHHHHHHHCCCC
T ss_conf 3799999999999850899839848899999873569999779989996286442058--83999999999999865899
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHC
Q ss_conf 87998316532488899999999828
Q gi|254780129|r 155 KRFIELTGTPSPNGLIDLWGQIWFLD 180 (220)
Q Consensus 155 ~~~l~LTgTPi~n~~~el~~ll~~l~ 180 (220)
T Consensus 160 ~qRIGLSATv--~p~e~v---A~fLg 180 (1490)
T PRK09751 160 AQRIGLSATV--RSASDV---AAFLG 180 (1490)
T ss_pred CCEEEEECCC--CCHHHH---HHHHC
T ss_conf 9689997766--899999---98737