HHsearch alignment for GI: 254780129 and conserved domain: PRK11054
>PRK11054 helD DNA helicase IV; Provisional.
Probab=95.75 E-value=0.034 Score=31.77 Aligned_cols=51 Identities=27% Similarity=0.285 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCC---CCCEEEEECC
Q ss_conf 3489999999999679819996899988999999999997408---9948997233
Q gi|254780129|r 5 LKPHQIVMVNWLLSHDRCALWASMGSGKTVSVLFALSTIKILD---PRPVLIIAPL 57 (220)
Q Consensus 5 Lrp~Q~~a~~~~~~~~~~~l~~~~G~GKT~~ai~~~~~~~~~~---~~~~LIi~P~ 57 (220)
T Consensus 197 Ln~~Qr~Avi--~~ed~~LVLAGAGSGKT~vLt~RiayLI~~g~~~P~~ILaLTFT 250 (684)
T PRK11054 197 LNPSQARAVV--NGEDSLLVLAGAGSGKTSVLVARAGWLLARGQAQPEQILLLAFG 250 (684)
T ss_pred CCHHHHHHEE--ECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHEEEEECC
T ss_conf 9989995727--47996489833899707799999999997599986677868634