HHsearch alignment for GI: 254780129 and conserved domain: PRK12323

>PRK12323 DNA polymerase III subunits gamma and tau; Provisional.
Probab=97.47  E-value=0.00095  Score=40.67  Aligned_cols=145  Identities=12%  Similarity=0.132  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHCC---CCEEEECC-CCCHHHHHHHHHHHHHHCCC--CCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             9999999999679---81999689-99889999999999974089--948997233101378899998515534606998
Q gi|254780129|r    8 HQIVMVNWLLSHD---RCALWASM-GSGKTVSVLFALSTIKILDP--RPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSS   81 (220)
Q Consensus         8 ~Q~~a~~~~~~~~---~~~l~~~~-G~GKT~~ai~~~~~~~~~~~--~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~   81 (220)
T Consensus        23 ~v~~~l~na~~~~r~~haylf~G~rGvGKTt~ari~Ak~lnc~~~~~~~g~~~~pcg~C~~--C~~i~~---g~~~d~~E   97 (721)
T PRK12323         23 HVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAKSLNCTGPDGEGGITAQPCGQCRA--CTEIDA---GRFVDYIE   97 (721)
T ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH--HHHHHC---CCCCCEEE
T ss_conf             9999999999719975447502799888989999999997689986678987887877654--687756---89876477


Q ss_pred             EECCCCCCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             61121011223456766278656673100000000247200002512201365433203699999998513798799831
Q gi|254780129|r   82 LIGSERQRIKALNTPAHLYIINFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELT  161 (220)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LT  161 (220)
T Consensus        98 iDaas~~~v~~~----------r~l~~-~~~y~P~~~~~KvyiiDevhmls-------~~afnalLKtlEePP~hv~Fil  159 (721)
T PRK12323         98 MDAASNRGVDEM----------AQLLD-QAVYAPTAGRFKVYMIDEVHMLT-------NHAFNAMLKTLEEPPPHVKFIL  159 (721)
T ss_pred             EECCCCCCHHHH----------HHHHH-HCCCCCCCCCEEEEEEECCCCCC-------HHHHHHHHHHHCCCCCCEEEEE
T ss_conf             436767888999----------99998-54558876644699985400058-------9999999984017975538999


Q ss_pred             CCCCCCC-HHHHHHH
Q ss_conf             6532488-8999999
Q gi|254780129|r  162 GTPSPNG-LIDLWGQ  175 (220)
Q Consensus       162 gTPi~n~-~~el~~l  175 (220)
T Consensus       160 aTT~~~Kip~TilSR  174 (721)
T PRK12323        160 ATTDPQKIPVTVLSR  174 (721)
T ss_pred             ECCCHHHCCHHHHHH
T ss_conf             438634485889877