HHsearch alignment for GI: 254780129 and conserved domain: PRK12377
>PRK12377 putative replication protein; Provisional.
Probab=92.20 E-value=0.33 Score=26.11 Aligned_cols=54 Identities=13% Similarity=0.060 Sum_probs=33.3
Q ss_pred CHHHHHHHHHH--------HHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf 48999999999--------96798199968999889999999999974089948997233101
Q gi|254780129|r 6 KPHQIVMVNWL--------LSHDRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVA 60 (220)
Q Consensus 6 rp~Q~~a~~~~--------~~~~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~ 60 (220)
T Consensus 80 ~~~~~~a~~~a~~~~~~F~~~~~NlIf~G~pGtGKTHLA~AIg~~a~~~-G~sVlF~t~~dLv 141 (248)
T PRK12377 80 NDGQRYALSQAKSIADELMTGCTNFVFSGKPGTGKNHLAAAIGNRLLAK-GRSVIVVTVPDVM 141 (248)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHC-CCEEEEEEHHHHH
T ss_conf 8789999999999999873188608998999987889999999999987-9969998899999