HHsearch alignment for GI: 254780129 and conserved domain: PRK13342

>PRK13342 recombination factor protein RarA; Reviewed.

Probab=95.30  E-value=0.2  Score=27.36  Aligned_cols=27  Identities=22%  Similarity=0.460  Sum_probs=17.8

Q ss_pred             HHHHHHC---CCCEEEECCCCCHHHHHHHH
Q ss_conf             9999967---98199968999889999999
Q gi|254780129|r   13 VNWLLSH---DRCALWASMGSGKTVSVLFA   39 (220)
Q Consensus        13 ~~~~~~~---~~~~l~~~~G~GKT~~ai~~   39 (220)
T Consensus        28 L~~~i~~~~~~s~Il~GPPG~GKTTlA~ii   57 (417)
T PRK13342         28 LRRMIEAGRLSSMILWGPPGTGKTTLARII   57 (417)
T ss_pred             HHHHHHCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf             999997699975998896999899999999