HHsearch alignment for GI: 254780129 and conserved domain: PRK13767
>PRK13767 ATP-dependent helicase; Provisional.
Probab=99.73 E-value=6.9e-17 Score=116.15 Aligned_cols=167 Identities=18% Similarity=0.255 Sum_probs=109.2
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH-HHHHHHHHCC-------CCCEEEEECCCCCHH-HHH------HHH
Q ss_conf 1348999999999967981999689998899999-9999997408-------994899723310137-889------999
Q gi|254780129|r 4 VLKPHQIVMVNWLLSHDRCALWASMGSGKTVSVL-FALSTIKILD-------PRPVLIIAPLRVAQY-VWK------DEV 68 (220)
Q Consensus 4 ~Lrp~Q~~a~~~~~~~~~~~l~~~~G~GKT~~ai-~~~~~~~~~~-------~~~~LIi~P~s~~~~-~W~------~e~ 68 (220)
T Consensus 32 ~p~~~Q~~a~~~i~~G~~~Li~ApTGsGKTlAaflp~l~~l~~~~~~~~~~~~~~~LyIsPLkAL~~D~~r~L~~pl~~i 111 (878)
T PRK13767 32 TFTPPQRYAIPLIHEGKNVLISSPTGSGKTLAAFLGIIDELFRLAEEGELEDSVYCIYVSPLRALNNDIHRNLEEPLEEI 111 (878)
T ss_pred CCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH
T ss_conf 99989999999996799889989998139999999999999850003677887289996847988999999888699999
Q ss_pred HHHC-----CCCCCEEEEEECCCC--CCCCCCCCCCCEEEECHHHHHCCCCCC---CCCCCCCCCCCCHHHCCCCCCCCC
Q ss_conf 8515-----534606998611210--112234567662786566731000000---002472000025122013654332
Q gi|254780129|r 69 ERWS-----AFSDMTVSSLIGSER--QRIKALNTPAHLYIINFENIPWLVKMK---LDHWDFATIVVDESTKLKSFRTHQ 138 (220)
Q Consensus 69 ~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~l~~~~~~~---~~~~~~~~iIiDEaH~~kn~~~~~ 138 (220)
T Consensus 112 ~~~~~~~g~~~~~i~v~vr~GDT~~~er~r~~~~pp~ILiTTPEsL~lll~~~~~~~~l~~l~~VIvDE~H~l~~--~kR 189 (878)
T PRK13767 112 REIAKERGIELPEIRHAVRTGDTSSYEKQKMLRKPPHILITTPETLAILLNSPKFREKLRTVKWVIVDEIHSLAE--NKR 189 (878)
T ss_pred HHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEECCHHHHHHHHCCHHHHHHHCCCCEEEECCCHHHHC--CCC
T ss_conf 999875278877744776369999999999974899879879899999954967999855899999817167524--774
Q ss_pred HHHHHHHHHHHHHC--CCCEEEEECCCCCCCCHHHHHH
Q ss_conf 03699999998513--7987998316532488899999
Q gi|254780129|r 139 GTKQTRALGKVAFS--KVKRFIELTGTPSPNGLIDLWG 174 (220)
Q Consensus 139 ~~k~~k~l~~~~~~--~~~~~l~LTgTPi~n~~~el~~ 174 (220)
T Consensus 190 G~~l~l~L~RL~~~~~~~~~riglSATv--~~~~~~a~ 225 (878)
T PRK13767 190 GVHLSLSLERLEELVGGEFVRIGLSATI--EPLEEVAK 225 (878)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCC--CCHHHHHH
T ss_conf 5899999999998668998799996464--89999999