HHsearch alignment for GI: 254780129 and conserved domain: PRK13849

>PRK13849 putative crown gall tumor protein VirC1; Provisional.

Probab=93.77  E-value=0.46  Score=25.23  Aligned_cols=40  Identities=23%  Similarity=0.301  Sum_probs=24.7

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCEEEE-E-CCCCCHHHHHHHHH
Q ss_conf             999889999999999974089948997-2-33101378899998
Q gi|254780129|r   28 MGSGKTVSVLFALSTIKILDPRPVLII-A-PLRVAQYVWKDEVE   69 (220)
Q Consensus        28 ~G~GKT~~ai~~~~~~~~~~~~~~LIi-~-P~s~~~~~W~~e~~   69 (220)
T Consensus        11 GG~GKtT~a~~la~~~~~~-g~~v~~iD~Dpq~s~~~-W~e~a~   52 (231)
T PRK13849         11 GGAGKTTALMGLCAALASD-GKRVALFEADENRPLTR-WKENAL   52 (231)
T ss_pred             CCCCHHHHHHHHHHHHHHC-CCEEEEEECCCCCCHHH-HHHHHH
T ss_conf             9876999999999999978-99599996899868899-998765