HHsearch alignment for GI: 254780129 and conserved domain: TIGR02782
>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB; InterPro: IPR014149 This entry represents TrbB, a protein, which is encoded in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer . TrbB is a homologue of the vir system VirB11 ATPase , and the Flp pilus system ATPase TadA ..
Probab=91.72 E-value=0.74 Score=24.06 Aligned_cols=51 Identities=24% Similarity=0.189 Sum_probs=32.7
Q ss_pred CCHHHHHHHHHH-HHCCCCEEEECCCCCHHHHHHHHHHHHHH-CC-CCCEEEEE
Q ss_conf 348999999999-96798199968999889999999999974-08-99489972
Q gi|254780129|r 5 LKPHQIVMVNWL-LSHDRCALWASMGSGKTVSVLFALSTIKI-LD-PRPVLIIA 55 (220)
Q Consensus 5 Lrp~Q~~a~~~~-~~~~~~~l~~~~G~GKT~~ai~~~~~~~~-~~-~~~~LIi~ 55 (220)
T Consensus 124 mtaaQ~d~l~~Av~ar~NIlv~GGTGSGKTTLaNAlla~I~~l~~P~dR~vIiE 177 (315)
T TIGR02782 124 MTAAQRDVLREAVAARKNILVVGGTGSGKTTLANALLAEIAKLNDPDDRVVIIE 177 (315)
T ss_pred CCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 557899999999971298899814588579999999998852169996189985