HHsearch alignment for GI: 254780129 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=93.75 E-value=0.15 Score=28.01 Aligned_cols=150 Identities=21% Similarity=0.149 Sum_probs=74.5
Q ss_pred CCCCHHHHHHHHHH----HH-C---CCCEEEECCCCCHHHHHHHHHHHHHHCCCC--CE-EEE----EC-CCCCHHHHHH
Q ss_conf 71348999999999----96-7---981999689998899999999999740899--48-997----23-3101378899
Q gi|254780129|r 3 LVLKPHQIVMVNWL----LS-H---DRCALWASMGSGKTVSVLFALSTIKILDPR--PV-LII----AP-LRVAQYVWKD 66 (220)
Q Consensus 3 ~~Lrp~Q~~a~~~~----~~-~---~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~--~~-LIi----~P-~s~~~~~W~~ 66 (220)
T Consensus 19 i~hRdeqI~~l~~~L~~~l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~NC~~~~T~-y~~~~ 97 (383)
T TIGR02928 19 IVHRDEQIEELAKALRPILRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYINCQILDTS-YQVLV 97 (383)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCH-HHHHH
T ss_conf 66867899999999887506748987258878889878899999999999986226997158999778546846-99999
Q ss_pred HHHHHC--CCCCCEEEEEECCCCCCCCCCCCCCCEEEECHHHHHCCCCCCC-CCCCCCCCCCCHHHCC--CCCCCCCHHH
Q ss_conf 998515--5346069986112101122345676627865667310000000-0247200002512201--3654332036
Q gi|254780129|r 67 EVERWS--AFSDMTVSSLIGSERQRIKALNTPAHLYIINFENIPWLVKMKL-DHWDFATIVVDESTKL--KSFRTHQGTK 141 (220)
Q Consensus 67 e~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~~-~~~~~~~iIiDEaH~~--kn~~~~~~~k 141 (220)
T Consensus 98 ~L~~~ln~~~~~~~v-P~tG----------------~s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~Lv~~~~d~---PA 157 (383)
T TIGR02928 98 ELANQLNRRGSGEEV-PTTG----------------LSTSEVFRELYKELNRERGDSLIIVLDEIDKLVRKDDDD---PA 157 (383)
T ss_pred HHHHHHCCCCCCCCC-CCCC----------------CCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCC---HH
T ss_conf 999985157788889-8877----------------878999999999983201887999862310221588888---07
Q ss_pred HHHHHHHHHHC--C-----C-CEEEEECCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 99999998513--7-----9-8799831653248889999999982888
Q gi|254780129|r 142 QTRALGKVAFS--K-----V-KRFIELTGTPSPNGLIDLWGQIWFLDKG 182 (220)
Q Consensus 142 ~~k~l~~~~~~--~-----~-~~~l~LTgTPi~n~~~el~~ll~~l~p~ 182 (220)
T Consensus 158 yS~~LY~L~Ra~~~~~~~~~~vgvIgIS-----ND~~----f~~~Ld~R 197 (383)
T TIGR02928 158 YSKLLYQLSRARENGDLENAKVGVIGIS-----NDLK----FRENLDPR 197 (383)
T ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEEEE-----CCCH----HHHHCCCC
T ss_conf 8788534331000357788534899986-----5714----36445753