HHsearch alignment for GI: 254780129 and conserved domain: cd01129
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP). It is responsible for the export the majority of Gram-negative bacterial exoenzymes and toxins. PulE is a cytoplasmic protein of the GSP, which contains an ATP binding site and a tetracysteine motif. This subgroup also includes PillB and HofB.
Probab=92.11 E-value=0.57 Score=24.72 Aligned_cols=51 Identities=27% Similarity=0.416 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHHHHHHCCCCE--EEECCCCCHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 713489999999999679819--9968999889999999999974089948997
Q gi|254780129|r 3 LVLKPHQIVMVNWLLSHDRCA--LWASMGSGKTVSVLFALSTIKILDPRPVLII 54 (220)
Q Consensus 3 ~~Lrp~Q~~a~~~~~~~~~~~--l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi 54 (220)
T Consensus 62 LG~~~~~~~~l~~~~~~~~GlilitGptGSGKtTtl~a~l~~~~~-~~~~i~ti 114 (264)
T cd01129 62 LGLKPENLEIFRKLLEKPHGIILVTGPTGSGKTTTLYSALSELNT-PEKNIITV 114 (264)
T ss_pred HCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCC-CCCEEEEE
T ss_conf 579999999999997089988999789999779999999986436-88508998