HHsearch alignment for GI: 254780129 and conserved domain: pfam04851
>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=99.87 E-value=1.5e-21 Score=142.94 Aligned_cols=103 Identities=25% Similarity=0.332 Sum_probs=81.6
Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEE
Q ss_conf 87134899999999996798199968999889999999999974089948997233101378899998515534606998
Q gi|254780129|r 2 HLVLKPHQIVMVNWLLSHDRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEVERWSAFSDMTVSS 81 (220)
Q Consensus 2 ~~~Lrp~Q~~a~~~~~~~~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~~~~~~~~~~~~~~ 81 (220)
T Consensus 1 ~~~LR~yQ~~a~~~~~~~~~~~i~~pTGsGKT~~~~~~i~~~~~-~~~~~lvlvp~~~L~~Q~~~~~------------- 66 (103)
T pfam04851 1 KLELRPYQIEAIRNLLEKKRGLIVMATGSGKTLTAAKLIARLLK-GKKKVLFLVPRKDLLEQALEEF------------- 66 (103)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHHHH-------------
T ss_conf 99872999999999996398699958999879999999999984-6992999908299999999965-------------
Q ss_pred EECCCCCCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 61121011223456766278656673100000000247200002512201365433203699999998513798799831
Q gi|254780129|r 82 LIGSERQRIKALNTPAHLYIINFENIPWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELT 161 (220)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~iIiDEaH~~kn~~~~~~~k~~k~l~~~~~~~~~~~l~LT 161 (220)
T Consensus 67 ----------------------------------------lii~DE~H~~~a~------~~~~~l~~--~~~~~~~lGlT 98 (103)
T pfam04851 67 ----------------------------------------VIIIDEAHHSSAK------TKYRKILE--YFKPAFLLGLT 98 (103)
T ss_pred ----------------------------------------HHHHHHHHHCCCH------HHHHHHHH--HCCCCEEEEEE
T ss_conf ----------------------------------------6460163523537------89999999--57726089980
Q ss_pred CCCCC
Q ss_conf 65324
Q gi|254780129|r 162 GTPSP 166 (220)
Q Consensus 162 gTPi~ 166 (220)
T Consensus 99 ATP~R 103 (103)
T pfam04851 99 ATPER 103 (103)
T ss_pred ECCCC
T ss_conf 08889