HHsearch alignment for GI: 254780129 and conserved domain: pfam12340
>pfam12340 DUF3638 Protein of unknown function (DUF3638). This domain family is found in eukaryotes, and is approximately 230 amino acids in length. There are two conserved sequence motifs: LLE and NMG.
Probab=97.06 E-value=0.0018 Score=39.15 Aligned_cols=106 Identities=18% Similarity=0.236 Sum_probs=62.8
Q ss_pred CCCCCHHHHHHHHHHHH---CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH-HHHCCCCCC
Q ss_conf 87134899999999996---79819996899988999999999997408994899723310137889999-851553460
Q gi|254780129|r 2 HLVLKPHQIVMVNWLLS---HDRCALWASMGSGKTVSVLFALSTIKILDPRPVLIIAPLRVAQYVWKDEV-ERWSAFSDM 77 (220)
Q Consensus 2 ~~~Lrp~Q~~a~~~~~~---~~~~~l~~~~G~GKT~~ai~~~~~~~~~~~~~~LIi~P~s~~~~~W~~e~-~~~~~~~~~ 77 (220)
T Consensus 21 ~iliR~~Q~~va~~~i~~~~~~n~v~QlnMGeGKTsVI~Pmla~~LAdg~~Lvr~vvp~~Ll~q~-~~~L~~~lggll~r 99 (229)
T pfam12340 21 NILIRPVQVDVARAMISPSSGSNSVLQLNMGEGKTSVIVPMVAAVLADGSRLVRVIVPKPLLRQM-AQMLQSRLGGLLGR 99 (229)
T ss_pred CCEECHHHHHHHHHHHCCCCCCCEEEHHHCCCCCCEEEHHHHHHHHCCCCCEEEEECCHHHHHHH-HHHHHHHHHHHCCC
T ss_conf 96542899999999857557887220112069962243788999974888458998268899999-99999986421377
Q ss_pred EEEEEECCCCCC------------CCCCCCCCCEEEECHHHHH
Q ss_conf 699861121011------------2234567662786566731
Q gi|254780129|r 78 TVSSLIGSERQR------------IKALNTPAHLYIINFENIP 108 (220)
Q Consensus 78 ~~~~~~~~~~~~------------~~~~~~~~~~~i~~~~~l~ 108 (220)
T Consensus 100 ~v~~lPFsR~~~~~~~~~~~~~~~~~~~~~~~GIll~~PEhil 142 (229)
T pfam12340 100 EIYHLPFSRRTPTTESEINLYRQLHEECMKEGGVLLAQPEHIL 142 (229)
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHH
T ss_conf 0598403476889989999999999999972987996807877