RPSBLAST alignment for GI: 254780129 and conserved domain: KOG0384

>gnl|CDD|35605 KOG0384, KOG0384, KOG0384, Chromodomain-helicase DNA-binding protein [Transcription]. Length = 1373

 Score = 53.1 bits (127), Expect = 6e-08
 Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 29/196 (14%)

Query: 5   LKPHQIVMVNWLL----SHDRCALWASMGSGKTVSVLFALSTIK--ILDPRPVLIIAPLR 58
           L+ +Q+  +NWLL      + C L   MG GKTV  +  LS +   +    P L++ PL 
Sbjct: 371 LRDYQLEGLNWLLYSWYKRNNCILADEMGLGKTVQTITFLSYLFHSLQIHGPFLVVVPLS 430

Query: 59  VAQYVWKDEVERWSAFSDMTVSSLIGSERQR--------IKALNTPA---HLYIINFENI 107
                W+ E E W+   DM V    G+   R          + NT     +  +  +E +
Sbjct: 431 TIT-AWEREFETWT---DMNVIVYHGNLESRQLIRQYEFYHSSNTKKLKFNALLTTYEIV 486

Query: 108 PWLVKMKLDHWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFIELTGTPSPN 167
               K +L    +  ++VDE+ +LK+        +++    +   K+   + +TGTP  N
Sbjct: 487 -LKDKAELSKIPWRYLLVDEAHRLKN-------DESKLYESLNQFKMNHRLLITGTPLQN 538

Query: 168 GLIDLWGQIWFLDKGK 183
            L +LW  + FL  GK
Sbjct: 539 SLKELWSLLHFLMPGK 554