RPSBLAST alignment for GI: 254780129 and conserved domain: KOG4439

>gnl|CDD|39640 KOG4439, KOG4439, KOG4439, RNA polymerase II transcription termination factor TTF2/lodestar, DEAD-box superfamily [Transcription, Replication, recombination and repair]. Length = 901
 Score = 48.6 bits (115), Expect = 1e-06
 Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 36/201 (17%)

Query: 5   LKPHQIVMVNWLL-----SHDRCALWASMGSGKTVSVLFALSTIKIL---------DPRP 50
           L PHQ   + WLL           L   MG GKT+S++  +   K               
Sbjct: 326 LMPHQKAALRWLLWRESQPPSGGILADDMGLGKTLSMISLILHQKAARKAREKKGESASK 385

Query: 51  VLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGSERQRIKALNTPAH-LYIINFENIPW 109
            LII P  +  + W+ EV R    + ++V    G  ++ I A     + + I  +  +  
Sbjct: 386 TLIICPASLI-HQWEAEVARRLEQNALSVYLYHGPNKREISAKELRKYDVVITTYNLVAN 444

Query: 110 LVKMKLD-----------HWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFI 158
               +L+            W  + +++DE+  +++  T       +   K  +       
Sbjct: 445 KPDDELEEGKNSSPLARIAW--SRVILDEAHNIRNSNTQCSKAVCKLSAKSRWC------ 496

Query: 159 ELTGTPSPNGLIDLWGQIWFL 179
            LTGTP  N L D++  + FL
Sbjct: 497 -LTGTPIQNNLWDVYSLLRFL 516