RPSBLAST alignment for GI: 254780129 and conserved domain: KOG4439
>gnl|CDD|39640 KOG4439, KOG4439, KOG4439, RNA polymerase II transcription termination factor TTF2/lodestar, DEAD-box superfamily [Transcription, Replication, recombination and repair]. Length = 901
Score = 48.6 bits (115), Expect = 1e-06
Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 36/201 (17%)
Query: 5 LKPHQIVMVNWLL-----SHDRCALWASMGSGKTVSVLFALSTIKIL---------DPRP 50
L PHQ + WLL L MG GKT+S++ + K
Sbjct: 326 LMPHQKAALRWLLWRESQPPSGGILADDMGLGKTLSMISLILHQKAARKAREKKGESASK 385
Query: 51 VLIIAPLRVAQYVWKDEVERWSAFSDMTVSSLIGSERQRIKALNTPAH-LYIINFENIPW 109
LII P + + W+ EV R + ++V G ++ I A + + I + +
Sbjct: 386 TLIICPASLI-HQWEAEVARRLEQNALSVYLYHGPNKREISAKELRKYDVVITTYNLVAN 444
Query: 110 LVKMKLD-----------HWDFATIVVDESTKLKSFRTHQGTKQTRALGKVAFSKVKRFI 158
+L+ W + +++DE+ +++ T + K +
Sbjct: 445 KPDDELEEGKNSSPLARIAW--SRVILDEAHNIRNSNTQCSKAVCKLSAKSRWC------ 496
Query: 159 ELTGTPSPNGLIDLWGQIWFL 179
LTGTP N L D++ + FL
Sbjct: 497 -LTGTPIQNNLWDVYSLLRFL 516