HHsearch alignment for GI: 254780130 and conserved domain: KOG0339
>KOG0339 consensus.
Probab=97.46 E-value=0.00043 Score=42.20 Aligned_cols=116 Identities=17% Similarity=0.340 Sum_probs=85.4
Q ss_pred HHHHHHHHH-HHHHCCCCCEEEHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHH
Q ss_conf 234334999-9861489971105789999999876530----------47782348999999727898699972144323
Q gi|254780130|r 53 DEKIKALEV-IIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 (205)
Q Consensus 53 ~~Kl~~l~~-ii~~~~~~kviVf~~f~~~l~~l~~~~~----------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~ 121 (205)
T Consensus 452 ~~Kl~wl~~~L~~f~S~gkvlifVTKk~~~e~i~a~Lklk~~~v~llhgdkdqa~rn~~ls~fKkk~~~Vlvat-Dvaar 530 (731)
T KOG0339 452 EKKLNWLLRHLVEFSSEGKVLIFVTKKADAEEIAANLKLKGFNVSLLHGDKDQAERNEVLSKFKKKRKPVLVAT-DVAAR 530 (731)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEE-EHHHC
T ss_conf 78889999975501367847999942278999998732056325652274566777779998762477548884-07651
Q ss_pred HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHH
Q ss_conf 32243206758972689998880225555766654202657753999998388958
Q gi|254780130|r 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 (205)
Q Consensus 122 GlnL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiE 177 (205)
T Consensus 531 gldI~~-ikTVvnyD~ardIdththrigrtg-----Rag~kG--vayTlvTeKDa~ 578 (731)
T KOG0339 531 GLDIPS-IKTVVNYDFARDIDTHTHRIGRTG-----RAGEKG--VAYTLVTEKDAE 578 (731)
T ss_pred CCCCCC-CCEEECCCCCCHHHHHHHHHHHCC-----CCCCCC--EEEEEECHHHHH
T ss_conf 787522-010234322210677887751023-----355565--136873355677