HHsearch alignment for GI: 254780130 and conserved domain: PRK10590

>PRK10590 ATP-dependent RNA helicase RhlE; Provisional.
Probab=99.37  E-value=6.5e-12  Score=85.44  Aligned_cols=124  Identities=18%  Similarity=0.243  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHH
Q ss_conf             2343349999861489971105789999999876530----------477823489999997278986999721443233
Q gi|254780130|r   53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG  122 (205)
Q Consensus        53 ~~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~~----------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~G  122 (205)
T Consensus       230 ~~k~~~L~~ll~~~~~~~~iIF~~tk~~a~~l~~~L~~~g~~~~~lHg~~sq~~R~~~l~~F~~g~~~vLVaT-DvaaRG  308 (457)
T PRK10590        230 KRKRELLSQMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVAT-DIAARG  308 (457)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEC-CCCCCC
T ss_conf             7899999999861586633588411999999999985569982323247899999999999986998299957-701155


Q ss_pred             HHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHH
Q ss_conf             22432067589726899988802255557666542026577539999983889589999999999
Q gi|254780130|r  123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK  187 (205)
Q Consensus       123 lnL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l~~K  187 (205)
T Consensus       309 iDi~-~V~~VInyD~P~~~e~YvHRiGRTG-----RaG~~G~--ait~v~~~--e~~~~~~ie~~  363 (457)
T PRK10590        309 LDIE-ELPHVVNYELPNVPEDYVHRIGRTG-----RAAATGE--ALSLVCVD--EHKLLRDIEKL  363 (457)
T ss_pred             CCCC-CCCEEEEECCCCCHHHEECCCCCCC-----CCCCCEE--EEEEECHH--HHHHHHHHHHH
T ss_conf             6635-6887999389997445002267060-----5899536--99986689--99999999999