HHsearch alignment for GI: 254780130 and conserved domain: PRK11634

>PRK11634 ATP-dependent RNA helicase DeaD; Provisional.
Probab=99.24  E-value=7.6e-11  Score=79.56  Aligned_cols=124  Identities=16%  Similarity=0.226  Sum_probs=97.4

Q ss_pred             CHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH----------HCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHH
Q ss_conf             7234334999986148997110578999999987653----------047782348999999727898699972144323
Q gi|254780130|r   52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH  121 (205)
Q Consensus        52 ~~~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~----------~~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~  121 (205)
T Consensus       229 ~~~K~~aL~~~L~~~~~~~~IIF~~Tk~~~~~l~~~L~~~g~~~~~LHgdm~q~~R~~~l~~Fr~g~~~ILVaT-DvaAR  307 (629)
T PRK11634        229 GMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIAT-DVAAR  307 (629)
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEC-CCCCC
T ss_conf             24579999999861588848999822788999999999769965765689999999999999975999889878-62105


Q ss_pred             HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHH
Q ss_conf             32243206758972689998880225555766654202657753999998388958999999999
Q gi|254780130|r  122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT  186 (205)
Q Consensus       122 GlnL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l~~  186 (205)
T Consensus       308 GLDi~~-V~~VINyDlP~d~e~YVHRiGRT-----GRaGr~G~A--itfv~~--~e~~~l~~ier  362 (629)
T PRK11634        308 GLDVER-ISLVVNYDIPMDSESYVHRIGRT-----GRAGRAGRA--LLFVEN--RERRLLRNIER  362 (629)
T ss_pred             CCCCCC-CCEEEEECCCCCHHHCCCCCCCC-----CCCCCCEEE--EEEECH--HHHHHHHHHHH
T ss_conf             577256-88899968989743401025833-----168996469--998888--99999999999