HHsearch alignment for GI: 254780130 and conserved domain: PRK12899
>PRK12899 secA preprotein translocase subunit SecA; Reviewed.
Probab=94.97 E-value=0.25 Score=26.86 Aligned_cols=110 Identities=21% Similarity=0.214 Sum_probs=72.1
Q ss_pred CHHHHHHHHHHHHH--CCCCCEEEHHHHHHHHHHHHHHHHCCCC----H----HHHHHHHHHHHCC-CCCEEEECHHHHH
Q ss_conf 72343349999861--4899711057899999998765304778----2----3489999997278-9869997214432
Q gi|254780130|r 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----L----DKDPCTIQEWNEG-KIPLLFAHPASCG 120 (205)
Q Consensus 52 ~~~Kl~~l~~ii~~--~~~~kviVf~~f~~~l~~l~~~~~~~~~----~----~~r~~~i~~f~~~-~~~Vll~~~~a~g 120 (205)
T Consensus 550 ~~~K~~Avi~eI~~~h~~GqPVLVGT~SVe~SE~lS~~L~~~gI~H~VLNAK~h~~EAeIIA-~AG~~GaVTIAT-NMAG 627 (969)
T PRK12899 550 EREKYHAIVNEIASIHRSGNPILIGTESVEVSEKLSRILRQNRIEHTVLNAKNHAQEAEIIA-GAGKLGAVTVAT-NMAG 627 (969)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHH-HCCCCCCEEEEC-CCCC
T ss_conf 99999999999999995799889983857999999999998699645415111789999999-559999779713-2678
Q ss_pred HHHHH-------HHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 33224-------3206758972689998880225555766654202657753999
Q gi|254780130|r 121 HGLNL-------QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 (205)
Q Consensus 121 ~GlnL-------~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~ 168 (205)
T Consensus 628 RGTDIkL~~~V~~lGGLhVIGTERHES-----RRIDnQLRGRaGRQGDPGsS~F~ 677 (969)
T PRK12899 628 RGTDIKLDEEAVAVGGLHVIGTSRHQS-----RRIDRQLRGRCARLGDPGAAKFF 677 (969)
T ss_pred CCCCCCCCCCHHHCCCEEEEECCCCHH-----HHHHHHHHCCCCCCCCCCCCEEE
T ss_conf 985831381334338727852143401-----45776760331347899853267