HHsearch alignment for GI: 254780130 and conserved domain: smart00490
>smart00490 HELICc helicase superfamily c-terminal domain.
Probab=99.13 E-value=5.4e-11 Score=80.36 Aligned_cols=66 Identities=26% Similarity=0.450 Sum_probs=57.8
Q ss_pred HHCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 3047782348999999727898699972144323322432067589726899988802255557666542026
Q gi|254780130|r 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 (205)
Q Consensus 88 ~~~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~G 160 (205)
T Consensus 17 i~g~~~~~~R~~~~~~f~~~~~~ilv~t-~~~~~Gidl~~-~~~vI~~~~~~~~~~~~Q~~GR~-----~R~g 82 (82)
T smart00490 17 LHGGLSQEEREEILEKFNNGKIKVLVAT-DVAERGLDLPG-VDLVIIYDLPWSPASYIQRIGRA-----GRAG 82 (82)
T ss_pred EECCCCHHHHHHHHHHHHCCCCEEEEEE-EEEEEECCCCC-CCEEEEECCCCCHHHHHHHHCCC-----CCCC
T ss_conf 9896999999999999987997199995-02421148988-99999978996989999997258-----7899