HHsearch results for GI: 254780130 and protein with PDBid: 1fuu_A
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=99.05 E-value=1.4e-11 Score=82.41 Aligned_cols=121 Identities=14% Similarity=0.220 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH----------HCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
Q ss_conf 34334999986148997110578999999987653----------04778234899999972789869997214432332
Q gi|254780130|r 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 (205)
Q Consensus 54 ~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~----------~~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~Gl 123 (205)
.|...+.++++..++.+++||++-+...+.+.+.+ .++.+..+|....+.|++++.+|++++ .+.+.|+
T Consensus 245 ~~~~~~~~i~~~~~~~k~lIf~~s~~~a~~l~~~l~~~~~~~~~~~~~l~~~~R~~~~~~f~~~~~~ilv~T-~~l~~Gi 323 (394)
T 1fuu_A 245 YKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILIST-DLLARGI 323 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC-CHHHCCC
T ss_conf 888899999972278838999556788999999887538764343578799999999999862354289740-2544357
Q ss_pred HHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHH
Q ss_conf 24320675897268999888022555576665420265775399999838895899999999
Q gi|254780130|r 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 (205)
Q Consensus 124 nL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l~ 185 (205)
|+. ..+++|+|++|.|...|.|..||.. |.|+...| +.|++.+ |...++.+.
T Consensus 324 Dip-~v~~VI~~~~p~s~~~yiQr~GR~g-----R~g~~g~~--~~~~~~~--d~~~~~~ie 375 (394)
T 1fuu_A 324 DVQ-QVSLVINYDLPANKENYIHRIGRGG-----RFGRKGVA--INFVTNE--DVGAMRELE 375 (394)
T ss_dssp --------------------------------------------------------------
T ss_pred CCC-CCCEEEEECCCCCHHHHHHHHCCCC-----CCCCCEEE--EEEECHH--HHHHHHHHH
T ss_conf 777-8878999699999999998844077-----59894599--9997579--999999999