HHsearch results for GI: 254780130 and protein with PDBid: 1oyw_A
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=99.28 E-value=1.6e-11 Score=82.13 Aligned_cols=109 Identities=13% Similarity=0.240 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH----------HCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
Q ss_conf 34334999986148997110578999999987653----------04778234899999972789869997214432332
Q gi|254780130|r 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 (205)
Q Consensus 54 ~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~----------~~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~Gl 123 (205)
..++.+..++....+.++|||++-....+.+...+ .++.+...|..+.+.|.+++++|++++ .+.|.|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~IIf~~s~~~~e~la~~l~~~g~~~~~~h~~l~~~eR~~i~~~F~~g~i~vLVAT-~a~~~GI 300 (523)
T 1oyw_A 222 KPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVAT-VAFGMGI 300 (523)
T ss_dssp SHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEC-TTSCTTT
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEE-CHHHCCC
T ss_conf 899999887765058847999844521999999986569752420488899999999999976998789971-1432677
Q ss_pred HHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 2432067589726899988802255557666542026577539999
Q gi|254780130|r 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 (205)
Q Consensus 124 nL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~ 169 (205)
|... .+.||+|++|-|++.|.|.+||. -|.|+...|..++
T Consensus 301 D~p~-V~~VI~~~~P~s~~~Y~QriGRa-----GR~G~~g~~il~~ 340 (523)
T 1oyw_A 301 NKPN-VRFVVHFDIPRNIESYYQETGRA-----GRDGLPAEAMLFY 340 (523)
T ss_dssp CCTT-CCEEEESSCCSSHHHHHHHHTTS-----CTTSSCEEEEEEE
T ss_pred CCCC-CCEEEEECCCCCHHHHHHHHHHC-----CCCCCCEEEEEEE
T ss_conf 6003-76799948999999999884132-----4799963699996