HHsearch results for GI: 254780130 and protein with PDBid: 1tf5_A
>1tf5_A Preprotein translocase SECA subunit; ATPase, helicase, translocation, secretion, protein transport; 2.18A {Bacillus subtilis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1tf2_A 1m6n_A 1m74_A* 3jv2_A* 2ibm_A* 3dl8_A 1sx0_A 1sx1_A 1tm6_A
Probab=95.87 E-value=0.036 Score=30.34 Aligned_cols=114 Identities=18% Similarity=0.214 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHH--CCCCCEEEHHHHHHHHHHHHHHHHCCCC----H----HHHHHHHHHHHCCC-CCEEEECHHHHHH
Q ss_conf 2343349999861--4899711057899999998765304778----2----34899999972789-8699972144323
Q gi|254780130|r 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT----L----DKDPCTIQEWNEGK-IPLLFAHPASCGH 121 (205)
Q Consensus 53 ~~Kl~~l~~ii~~--~~~~kviVf~~f~~~l~~l~~~~~~~~~----~----~~r~~~i~~f~~~~-~~Vll~~~~a~g~ 121 (205)
..|+.++.+-+.. ..|++|+|++......+.+...+..... . ..++..+-. +.|. -.|.|++ ..||-
T Consensus 415 ~~k~~ai~~~i~~~~~~grpVLIgt~si~~se~ls~~l~~~~i~~~vLnak~~e~Ea~iIa-~AG~~G~VTIAT-nmAGR 492 (844)
T 1tf5_A 415 EGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNKGIPHQVLNAKNHEREAQIIE-EAGQKGAVTIAT-NMAGR 492 (844)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEESCHHHHHHHHHHHHTTTCCCEEECSSCHHHHHHHHT-TTTSTTCEEEEE-TTSST
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHH-HHCCCCEEEEEC-HHHCC
T ss_conf 4889999999999986588669998407867999999887275066652223575899999-637788699951-35428
Q ss_pred HHHHHH-------HCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
Q ss_conf 322432-------06758972689998880225555766654202657753999998388
Q gi|254780130|r 122 GLNLQY-------GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 (205)
Q Consensus 122 GlnL~~-------a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~ 174 (205)
|.+... +.=+||--.++-| .+++++.++|+-|=|+.-....+ +-.++
T Consensus 493 GTDIkl~~~v~~~GGLhVI~T~~~es-----~Rid~Ql~GRtgRQGdpGss~~~-lsled 546 (844)
T 1tf5_A 493 GTDIKLGEGVKELGGLAVVGTERHES-----RRIDNQLRGRSGRQGDPGITQFY-LSMED 546 (844)
T ss_dssp TCCCCCCTTSGGGTSEEEEESSCCSS-----HHHHHHHHTTSSGGGCCEEEEEE-EETTS
T ss_pred CCCCCCCCCCHHHCCCEEEEECCCCH-----HHHHHHHHCHHCCCCCCCEEEEE-EECCH
T ss_conf 88867553103424727987234721-----77898873323037998607898-51566