HHsearch results for GI: 254780130 and protein with PDBid: 1z3i_X
>1z3i_X Similar to RAD54-like; recombination ATPase helicase, recombination/DNA binding complex; 3.00A {Danio rerio} SCOP: c.37.1.19 c.37.1.19
Probab=100.00 E-value=6.2e-39 Score=233.73 Aligned_cols=190 Identities=21% Similarity=0.332 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHHHC-CCCEEHHHHHHHHHHHHHHCCCCHHCCC---------------------CCCCCCCCHHHHHHH
Q ss_conf 358999999999735-7832099999999999886077000344---------------------565420572343349
Q gi|254780130|r 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDE---------------------EKHWKEVHDEKIKAL 59 (205)
Q Consensus 2 k~Y~~l~~~~~~~~~-~~~i~a~~~~~~~~kL~Ql~~g~~~~d~---------------------~~~~~~~~~~Kl~~l 59 (205)
+.|+.+.+....... .........+..+++|+|+|+++....+ ........+.|+..|
T Consensus 325 ~~y~~~~~~~~~~~~~~~~~~~~~~l~~l~~lr~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~K~~~L 404 (644)
T 1z3i_X 325 ELYKLFLKQAKPVESLQTGKISVSSLSSITSLKKLCNHPALIYEKCLTGEEGFDGALDLFPQNYSTKAVEPQLSGKMLVL 404 (644)
T ss_dssp HHHHHHHHHHCGGGSSCTTCCCHHHHHHHHHHHHHHHCTHHHHHHHHHTCTTCTTGGGTSCSSCCSSSCCGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHH
T ss_conf 99999999878887530101347789999999998449998875310111210003331310000122132331489999
Q ss_pred HHHHH---HCCCCCEEEHHHHHHHHHHHHHHH----------HCCCCHHHHHHHHHHHHCCCC--CEEEECHHHHHHHHH
Q ss_conf 99986---148997110578999999987653----------047782348999999727898--699972144323322
Q gi|254780130|r 60 EVIIE---KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLN 124 (205)
Q Consensus 60 ~~ii~---~~~~~kviVf~~f~~~l~~l~~~~----------~~~~~~~~r~~~i~~f~~~~~--~Vll~~~~a~g~Gln 124 (205)
..++. ..+++|+||||+|..+++.|...+ .|+.+..+|+.+++.|++++. .|||++++|||+|||
T Consensus 405 ~~l~~~~~~~~~~KviIFs~~~~tl~~l~~~L~~~~~~~~~i~G~~~~~~R~~~i~~F~~~~~~~~v~LiSt~agg~GlN 484 (644)
T 1z3i_X 405 DYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSKAGGCGLN 484 (644)
T ss_dssp HHHHHHHHHHCCCEEEEEESCHHHHHHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHHSTTCCCCEEEEEGGGSCTTCC
T ss_pred HHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCC
T ss_conf 99998741267873899951156899999999975995899979999999999999963999997799820205450627
Q ss_pred HHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4320675897268999888022555576665420265775399999838895899999999999999999999
Q gi|254780130|r 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 (205)
Q Consensus 125 L~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l~~K~~~~~~~l~~ 197 (205)
|| +||++|+||+||||....||+||+ ||+||+++|+||+|+++||||++|++++..|..+++.+++.
T Consensus 485 L~-~A~~vI~~D~~WNp~~~~Qa~gRi-----~RiGQ~~~V~Vyrli~~gTiEe~i~~~~~~K~~l~~~v~~~ 551 (644)
T 1z3i_X 485 LI-GANRLVMFDPDWNPANDEQAMARV-----WRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDE 551 (644)
T ss_dssp CT-TEEEEEECSCCSSHHHHHHHHTTS-----SSTTCCSCEEEEEEEETTSHHHHHHHHHHHHHHTSCCCCSC
T ss_pred HH-HCCEEEEECCCCCHHHHHHHHHCC-----CCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 65-679999959999862899998513-----04899980799999859899999999999999999988589