HHsearch results for GI: 254780130 and protein with PDBid: 2db3_A

>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=99.20  E-value=3.4e-10  Score=74.73  Aligned_cols=100  Identities=13%  Similarity=0.211  Sum_probs=81.1

Q ss_pred             CCCCCEEEHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCEEEEE
Q ss_conf             489971105789999999876530----------4778234899999972789869997214432332243206758972
Q gi|254780130|r   66 ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF  135 (205)
Q Consensus        66 ~~~~kviVf~~f~~~l~~l~~~~~----------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~a~~~vI~~  135 (205)
                      ....+++||++-....+.+.+.|.          ++....+|..+++.|.+|+.+||+++ .+++.|+|+. ..++||+|
T Consensus       298 ~~~~~~iIF~~t~~~a~~l~~~L~~~~~~~~~~h~~~~~~~R~~~l~~F~~g~~~ILvaT-d~~~rGlDip-~V~~VI~~  375 (434)
T 2db3_A          298 EQADGTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIAT-SVASRGLDIK-NIKHVINY  375 (434)
T ss_dssp             HCCTTEEEECSSHHHHHHHHHHHHHTTCCEEEESTTSCHHHHHHHHHHHHTSSCSEEEEC-GGGTSSCCCT-TCCEEEES
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEC-CCCCCCCCCC-CCCEEEEE
T ss_conf             467349999434187999999987412453322456789999999999875998799977-8531577721-49789996


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
Q ss_conf             689998880225555766654202657753999998388
Q gi|254780130|r  136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN  174 (205)
Q Consensus       136 ~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~  174 (205)
                      ++|.|++.|.|..||.     -|.|++..  .+.|++..
T Consensus       376 d~P~s~~~yihriGR~-----GR~g~~G~--ai~f~~~~  407 (434)
T 2db3_A          376 DMPSKIDDYVHRIGRT-----GRVGNNGR--ATSFFDPE  407 (434)
T ss_dssp             SCCSSHHHHHHHHTTS-----SCTTCCEE--EEEEECTT
T ss_pred             CCCCCHHHHHHHCCCC-----CCCCCCEE--EEEEECCH
T ss_conf             9998989986432505-----47999538--99997717