HHsearch results for GI: 254780130 and protein with PDBid: 2eyq_A
>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1
Probab=97.58 E-value=9.5e-05 Score=44.62 Aligned_cols=94 Identities=11% Similarity=0.227 Sum_probs=63.2
Q ss_pred CCCCEEEHHHHHHHH----HHHHHHHH--------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCEEEE
Q ss_conf 899711057899999----99876530--------477823489999997278986999721443233224320675897
Q gi|254780130|r 67 NAAPIIVAYHFNSDL----ARLQKAFP--------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 (205)
Q Consensus 67 ~~~kviVf~~f~~~l----~~l~~~~~--------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~a~~~vI~ 134 (205)
.+..+.+++.+.... +.+.+.++ +.....+|+.++..|.+|+++||++| .+.+.|||... ++++|.
T Consensus 811 r~~q~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Hg~m~~~~r~~~~~~F~~g~~~iLVaT-~ii~~GiDip~-v~~vii 888 (1151)
T 2eyq_A 811 RGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCT-TIIETGIDIPT-ANTIII 888 (1151)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCHHHHHHHHHHHHTTSCCEEEES-STTGGGSCCTT-EEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEC-HHHHCCCCCCC-CCEEEE
T ss_conf 1897689953666568999999976887658886055789999999999974885099964-03423567788-857999
Q ss_pred ECCC-CCHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 2689-99888022555576665420265775399
Q gi|254780130|r 135 FSLW-WDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 (205)
Q Consensus 135 ~~~~-~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v 167 (205)
++.+ +..+.+-|-.||. -|-|....|+.
T Consensus 889 ~~a~~~~~~~lhQl~GR~-----GR~~~~~~a~l 917 (1151)
T 2eyq_A 889 ERADHFGLAQLHQLRGRV-----GRSHHQAYAWL 917 (1151)
T ss_dssp TTTTSSCHHHHHHHHTTC-----CBTTBCEEEEE
T ss_pred ECCCCCCHHHHHHHHHHC-----CCCCCCEEEEE
T ss_conf 357646899999885212-----54889549999