HHsearch results for GI: 254780130 and protein with PDBid: 2fsf_A
>2fsf_A Preprotein translocase SECA subunit; ATPase, DNA-RNA helicase, protein translocation, protein transport; 2.00A {Escherichia coli} PDB: 2fsg_A* 2fsh_A* 2fsi_A* 2vda_A 3bxz_A*
Probab=96.38 E-value=0.015 Score=32.45 Aligned_cols=114 Identities=18% Similarity=0.212 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHH--CCCCCEEEHHHHHHHHHHHHHHHHCCCC--------HHHHHHHHHHHHCCC-CCEEEECHHHHHH
Q ss_conf 2343349999861--4899711057899999998765304778--------234899999972789-8699972144323
Q gi|254780130|r 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQEWNEGK-IPLLFAHPASCGH 121 (205)
Q Consensus 53 ~~Kl~~l~~ii~~--~~~~kviVf~~f~~~l~~l~~~~~~~~~--------~~~r~~~i~~f~~~~-~~Vll~~~~a~g~ 121 (205)
..|..++.+-+.. ..|+||+|.+.....-+.|.+.|..... ...++..+-. +.|. -.|.+++ ..||-
T Consensus 424 ~~k~~ai~~ei~~~~~~grpVLvgt~sv~~se~ls~~L~~~~i~h~vLnak~~~~Ea~Iia-~AG~~g~VTIAT-NMAGR 501 (853)
T 2fsf_A 424 AEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVA-QAGYPAAVTIAT-NMAGR 501 (853)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEEESSHHHHHHHHHHHHHTTCCCEECCTTCHHHHHHHHH-TTTSTTCEEEEE-SCCSS
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHH-HCCCCCCEEEEC-CCCCC
T ss_conf 7889999999999997189779984249879999999987486076763233065899998-458999779841-10147
Q ss_pred HHHHHH------------------------------------HCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf 322432------------------------------------06758972689998880225555766654202657753
Q gi|254780130|r 122 GLNLQY------------------------------------GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 (205)
Q Consensus 122 GlnL~~------------------------------------a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v 165 (205)
|.+..- +.=+||--.++-| .+++++.++|+-|-|..-..
T Consensus 502 GTDIkLg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~GGLhVi~Ter~es-----~Rid~QlrGR~gRQGdpGss 576 (853)
T 2fsf_A 502 GTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHES-----RRIDNQLRGRSGRQGDAGSS 576 (853)
T ss_dssp CSCCCTTCCHHHHHHHCSSCCSSHHHHHHHHHHHHHHHHHHTTSEEEEESSCCSS-----HHHHHHHHTTSSGGGCCEEE
T ss_pred CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC-----HHHHHHHCCCCCCCCCCCCE
T ss_conf 7575467751012210248208899999999998765566349828996576652-----26777751610026999850
Q ss_pred EEEEEEECC
Q ss_conf 999998388
Q gi|254780130|r 166 FVYYLIAQN 174 (205)
Q Consensus 166 ~v~~l~~~~ 174 (205)
..| +-.+|
T Consensus 577 ~f~-lsleD 584 (853)
T 2fsf_A 577 RFY-LSMED 584 (853)
T ss_dssp EEE-EETTS
T ss_pred EEE-EECCH
T ss_conf 577-65661