HHsearch results for GI: 254780130 and protein with PDBid: 2hjv_A
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=99.79 E-value=8.7e-19 Score=122.29 Aligned_cols=126 Identities=14% Similarity=0.241 Sum_probs=104.5
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHH
Q ss_conf 72343349999861489971105789999999876530----------47782348999999727898699972144323
Q gi|254780130|r 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 (205)
Q Consensus 52 ~~~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~~----------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~ 121 (205)
++.|+++|.++++..++.++|||++++...+.|...+. ++.+...|..++..|+++++++++++ .+++.
T Consensus 19 ~~~K~~~L~~ll~~~~~~k~iVF~~s~~~~~~l~~~l~~~g~~~~~~~g~~~~~~r~~~~~~f~~~~~~vlv~T-~~~~~ 97 (163)
T 2hjv_A 19 EENKFSLLKDVLMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVAT-DVAAR 97 (163)
T ss_dssp GGGHHHHHHHHHHHHCCSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEC-GGGTT
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEEH-HHHHC
T ss_conf 89999999999984798859999690999999999898669838999778329889865232347856899861-45447
Q ss_pred HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
Q ss_conf 3224320675897268999888022555576665420265775399999838895899999999999
Q gi|254780130|r 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 (205)
Q Consensus 122 GlnL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l~~K~ 188 (205)
|+|++. ++++|+|++|||+..|.|+.||. .|.|+...+ +.|++. .|+.+++.+.++.
T Consensus 98 Gid~~~-v~~Vi~~d~p~~~~~y~qr~GR~-----gR~g~~g~~--i~~~~~--~d~~~l~~ie~~~ 154 (163)
T 2hjv_A 98 GIDIEN-ISLVINYDLPLEKESYVHRTGRT-----GRAGNKGKA--ISFVTA--FEKRFLADIEEYI 154 (163)
T ss_dssp TCCCSC-CSEEEESSCCSSHHHHHHHTTTS-----SCTTCCEEE--EEEECG--GGHHHHHHHHHHH
T ss_pred CCCCCC-CEEEEECCCCCCHHHHHHHHCCC-----CCCCCCCEE--EEEECH--HHHHHHHHHHHHH
T ss_conf 667665-50899758986899999986715-----707997579--997478--9999999999997