HHsearch results for GI: 254780130 and protein with PDBid: 2hjv_A

>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=99.79  E-value=8.7e-19  Score=122.29  Aligned_cols=126  Identities=14%  Similarity=0.241  Sum_probs=104.5

Q ss_pred             CHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHH
Q ss_conf             72343349999861489971105789999999876530----------47782348999999727898699972144323
Q gi|254780130|r   52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH  121 (205)
Q Consensus        52 ~~~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~~----------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~  121 (205)
                      ++.|+++|.++++..++.++|||++++...+.|...+.          ++.+...|..++..|+++++++++++ .+++.
T Consensus        19 ~~~K~~~L~~ll~~~~~~k~iVF~~s~~~~~~l~~~l~~~g~~~~~~~g~~~~~~r~~~~~~f~~~~~~vlv~T-~~~~~   97 (163)
T 2hjv_A           19 EENKFSLLKDVLMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVAT-DVAAR   97 (163)
T ss_dssp             GGGHHHHHHHHHHHHCCSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEC-GGGTT
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEEH-HHHHC
T ss_conf             89999999999984798859999690999999999898669838999778329889865232347856899861-45447


Q ss_pred             HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
Q ss_conf             3224320675897268999888022555576665420265775399999838895899999999999
Q gi|254780130|r  122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS  188 (205)
Q Consensus       122 GlnL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l~~K~  188 (205)
                      |+|++. ++++|+|++|||+..|.|+.||.     .|.|+...+  +.|++.  .|+.+++.+.++.
T Consensus        98 Gid~~~-v~~Vi~~d~p~~~~~y~qr~GR~-----gR~g~~g~~--i~~~~~--~d~~~l~~ie~~~  154 (163)
T 2hjv_A           98 GIDIEN-ISLVINYDLPLEKESYVHRTGRT-----GRAGNKGKA--ISFVTA--FEKRFLADIEEYI  154 (163)
T ss_dssp             TCCCSC-CSEEEESSCCSSHHHHHHHTTTS-----SCTTCCEEE--EEEECG--GGHHHHHHHHHHH
T ss_pred             CCCCCC-CEEEEECCCCCCHHHHHHHHCCC-----CCCCCCCEE--EEEECH--HHHHHHHHHHHHH
T ss_conf             667665-50899758986899999986715-----707997579--997478--9999999999997