HHsearch results for GI: 254780130 and protein with PDBid: 2jlq_A
>2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase, transferase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A
Probab=97.82 E-value=3.2e-05 Score=47.26 Aligned_cols=93 Identities=9% Similarity=0.019 Sum_probs=63.1
Q ss_pred CCCEEEHHHHHHHHHHHHHHHHCCCC----H--HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCEEEEE------
Q ss_conf 99711057899999998765304778----2--34899999972789869997214432332243206758972------
Q gi|254780130|r 68 AAPIIVAYHFNSDLARLQKAFPQGRT----L--DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF------ 135 (205)
Q Consensus 68 ~~kviVf~~f~~~l~~l~~~~~~~~~----~--~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~a~~~vI~~------ 135 (205)
+.++|||++-....+.|...|.+... . +..+...+.|.+++.++++++ .+++.|+|+- .+.||.+
T Consensus 188 ~gk~LVFv~S~~~ae~la~~L~~~g~~v~~Lh~~l~~~~~~~~~~~~~~ilVaT-di~E~Gini~--~~~VId~~~~~~p 264 (451)
T 2jlq_A 188 QGKTVWFVPSIKAGNDIANCLRKSGKRVIQLSRKTFDTEYPKTKLTDWDFVVTT-DISEMGANFR--AGRVIDPRRCLKP 264 (451)
T ss_dssp CSCEEEECSSHHHHHHHHHHHHTTTCCEEEECTTTHHHHGGGGGSSCCSEEEEC-GGGGSSCCCC--CSEEEECCEEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCEEEEEC-HHHHHCCCCC--CEEEEECCCCEEE
T ss_conf 999999959989999999999758983999089997999864348994299991-2365378649--7099989982666
Q ss_pred ----C----------CCCCHHHHHHHHHHHHHHHHHCCCCC-CCEEEE
Q ss_conf ----6----------89998880225555766654202657-753999
Q gi|254780130|r 136 ----S----------LWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVY 168 (205)
Q Consensus 136 ----~----------~~~n~~~~~Qa~~Ri~~~r~hR~GQ~-~~v~v~ 168 (205)
+ .|-|++.+.|..||+. |-|.. ...++|
T Consensus 265 ~~~~d~~~~~~~~~~~pis~~s~~QR~GRvG-----R~~~~~~~~yiy 307 (451)
T 2jlq_A 265 VILTDGPERVILAGPIPVTPASAAQRRGRIG-----RNPAQEDDQYVF 307 (451)
T ss_dssp EEECSSSCEEEEEEEEECCHHHHHHHHTTSS-----CCTTCCCEEEEE
T ss_pred EEEECCCCCEEEECCEEECHHHHHHHCCCCC-----CCCCCCCCEEEE
T ss_conf 6631677780672314418999864010779-----998788878998