HHsearch results for GI: 254780130 and protein with PDBid: 2oca_A
>2oca_A DAR protein, ATP-dependent DNA helicase UVSW; ATP-dependant helicase, T4-bacteriophage, recombination, hydrolase; 2.70A {Enterobacteria phage T4}
Probab=99.08 E-value=4.3e-10 Score=74.17 Aligned_cols=103 Identities=13% Similarity=0.019 Sum_probs=84.8
Q ss_pred CCCCEEEHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCEEEEEC
Q ss_conf 89971105789999999876530----------47782348999999727898699972144323322432067589726
Q gi|254780130|r 67 NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 (205)
Q Consensus 67 ~~~kviVf~~f~~~l~~l~~~~~----------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~a~~~vI~~~ 136 (205)
++.+++||++.....+.+.+.+. ++....+|+...+.|.+++..++++|....++|+|... .+.+|+++
T Consensus 346 ~~~~~LI~~~~~~~~~~l~~~L~~~~~~~~~i~g~~~~~~r~~~~~~~~~~~~~iivaT~~vl~~GiDip~-l~~vI~~~ 424 (510)
T 2oca_A 346 KDENAFVMFKHVSHGKAIFDLIKNEYDKVYYVSGEVDTETRNIMKTLAENGKGIIIVASYGVFSTGISVKN-LHHVVLAH 424 (510)
T ss_dssp TTCEEEEEESSHHHHHHHHHHHHTTCSSEEEESSSTTHHHHHHHHHHHHHCCSCEEEEEHHHHHHSCCCCS-EEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCHHHCEECCCC-CCEEEEEC
T ss_conf 42346678877886999999998538838999578757789999999756998599998796554225454-68999977
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCC-CEEEEEEEECCC
Q ss_conf 899988802255557666542026577-539999983889
Q gi|254780130|r 137 LWWDLEEHQQMIERIGVTRQRQAGFKR-AVFVYYLIAQNT 175 (205)
Q Consensus 137 ~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~-~v~v~~l~~~~t 175 (205)
|+-|+..+.|++||+ .|.+..+ .+.+|.++-.-+
T Consensus 425 p~kS~~~~iQ~iGR~-----lR~~~~K~~~~i~D~vd~~~ 459 (510)
T 2oca_A 425 GVKSKIIVLQTIGRV-----LRKHGSKTIATVWDLIDDAG 459 (510)
T ss_dssp CCCSCCHHHHHHHHH-----HTTTCCCCCCEEEEEEEECC
T ss_pred CCCCHHHHHHHHHCC-----CCCCCCCCEEEEEEEECCHH
T ss_conf 999889999997337-----86799985699999852677