HHsearch results for GI: 254780130 and protein with PDBid: 2p6r_A
>2p6r_A Afuhel308 helicase; protein-DNA complex, SF2 helicase, archaeal helicase, DNA repair,, DNA binding protein/DNA complex; 3.00A {Archaeoglobus fulgidus} SCOP: a.4.5.43 a.289.1.2 c.37.1.19 c.37.1.19 PDB: 2p6u_A
Probab=98.53 E-value=3.1e-07 Score=58.34 Aligned_cols=81 Identities=17% Similarity=0.278 Sum_probs=62.7
Q ss_pred CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCEEEE-------ECCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 477823489999997278986999721443233224320675897-------2689998880225555766654202657
Q gi|254780130|r 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF-------FSLWWDLEEHQQMIERIGVTRQRQAGFK 162 (205)
Q Consensus 90 ~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~a~~~vI~-------~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~ 162 (205)
++.+...|..+.+.|.+|.++|++++ .+.+.|+|+. +.+++|. ++.+.++..|.|..||. -|.|..
T Consensus 304 ~~l~~~eR~~i~~~f~~g~i~VLvaT-~~l~~Gvdlp-~~~vVI~~~~~~~~~~~~~s~~~~~Q~~GRa-----GR~g~~ 376 (702)
T 2p6r_A 304 AGLLNGQRRVVEDAFRRGNIKVVVAT-PTLAAGVNLP-ARRVIVRSLYRFDGYSKRIKVSEYKQMAGRA-----GRPGMD 376 (702)
T ss_dssp TTSCHHHHHHHHHHHHTTSCCEEEEC-STTTSSSCCC-BSEEEECCSEEESSSEEECCHHHHHHHHTTB-----SCTTTC
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCEEC-HHHHCCCCCC-CCEEEEEECCCCCCCCCCCCHHHHEEHHHCC-----CCCCCC
T ss_conf 89999999999998645876642112-1132176799-8659998175347876789999973265506-----778888
Q ss_pred CCEEEEEEEECCCHH
Q ss_conf 753999998388958
Q gi|254780130|r 163 RAVFVYYLIAQNTID 177 (205)
Q Consensus 163 ~~v~v~~l~~~~tiE 177 (205)
..-.++.++.+..-+
T Consensus 377 ~~G~~iil~~~~~~~ 391 (702)
T 2p6r_A 377 ERGEAIIIVGKRDRE 391 (702)
T ss_dssp SCEEEEEECCGGGHH
T ss_pred CCEEEEEEECCCCHH
T ss_conf 760799997885349