HHsearch results for GI: 254780130 and protein with PDBid: 2z0m_A
>2z0m_A 337AA long hypothetical ATP-dependent RNA helicase DEAD; ATP-binding, hydrolase, nucleotide-binding, RNA binding protein, structural genomics; 1.90A {Sulfolobus tokodaii}
Probab=99.19 E-value=1e-10 Score=77.67 Aligned_cols=111 Identities=17% Similarity=0.200 Sum_probs=85.2
Q ss_pred HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH------HCCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCC
Q ss_conf 34999986148997110578999999987653------047782348999999727898699972144323322432067
Q gi|254780130|r 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAF------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 (205)
Q Consensus 57 ~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~------~~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~a~~ 130 (205)
......+....+..+++|++.....+.+...+ .++.+...|+..++.|.+|+.+|++++ .+.+.|+|+. ..+
T Consensus 209 ~~~~~~~~~~~~~~~ii~~~t~~~~~~~~~~l~~~~~lh~~~~~~~R~~~~~~f~~g~~~iLvaT-~~~~~GiDip-~v~ 286 (337)
T 2z0m_A 209 RSKVQALRENKDKGVIVFVRTRNRVAKLVRLFDNAIELRGDLPQSVRNRNIDAFREGEYDMLITT-DVASRGLDIP-LVE 286 (337)
T ss_dssp HHHHHHHHTCCCSSEEEECSCHHHHHHHHTTCTTEEEECTTSCHHHHHHHHHHHHTTSCSEEEEC-HHHHTTCCCC-CBS
T ss_pred HHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE-CHHHCCCCCC-CCC
T ss_conf 56788886257862999998513579999865044340089999999999999877986589972-2554467876-888
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCH
Q ss_conf 5897268999888022555576665420265775399999838895
Q gi|254780130|r 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 (205)
Q Consensus 131 ~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~ti 176 (205)
++|+|++|.|+..|.|..||. -|.|++..| |.|++.+..
T Consensus 287 ~VI~~~~p~s~~~~iQr~GR~-----gR~g~~g~~--~~lv~~~~~ 325 (337)
T 2z0m_A 287 KVINFDAPQDLRTYIHRIGRT-----GRMGRKGEA--ITFILNEYW 325 (337)
T ss_dssp EEEESSCCSSHHHHHHHHTTB-----CGGGCCEEE--EEEESSCHH
T ss_pred EEEEECCCCCHHHHHHHCCCC-----CCCCCCEEE--EEEECCCHH
T ss_conf 899968999989997240104-----438995699--999888589