HHsearch results for GI: 254780130 and protein with PDBid: 2z83_A
>2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A
Probab=97.39 E-value=3.7e-05 Score=46.87 Aligned_cols=100 Identities=11% Similarity=0.022 Sum_probs=61.4
Q ss_pred HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCC----CH--HHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCEE
Q ss_conf 9999861489971105789999999876530477----82--34899999972789869997214432332243206758
Q gi|254780130|r 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----TL--DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 (205)
Q Consensus 59 l~~ii~~~~~~kviVf~~f~~~l~~l~~~~~~~~----~~--~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~a~~~v 132 (205)
+..+.+ .+.+++||++-..+.+.+.+.|.... .. +......+.|.+|+.+|++++ ..++.|+|+. .+.|
T Consensus 183 ~~~i~~--~~gk~LVFv~s~~~ae~la~~L~~~g~~v~~lh~~l~~~~~~~~~~g~~~vlVAT-di~E~Gidi~--v~~V 257 (459)
T 2z83_A 183 YEWITE--YAGKTVWFVASVKMGNEIAMCLQRAGKKVIQLNRKSYDTEYPKCKNGDWDFVITT-DISEMGANFG--ASRV 257 (459)
T ss_dssp CHHHHH--CCSCEEEECSCHHHHHHHHHHHHHTTCCEEEESTTCCCCCGGGSSSCCCSEEEES-SCC---CCCS--CSEE
T ss_pred HHHHHH--CCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCEEEEC-HHHHHCCCCC--CEEE
T ss_conf 999996--2899999979799999999999868990999689898999965337994399982-4887179779--8499
Q ss_pred EE----------ECC----------CCCHHHHHHHHHHHHHHHHHC-CCCCCCEEEE
Q ss_conf 97----------268----------999888022555576665420-2657753999
Q gi|254780130|r 133 VF----------FSL----------WWDLEEHQQMIERIGVTRQRQ-AGFKRAVFVY 168 (205)
Q Consensus 133 I~----------~~~----------~~n~~~~~Qa~~Ri~~~r~hR-~GQ~~~v~v~ 168 (205)
|- +++ |-|++...|..||. -| .|+.-.+++|
T Consensus 258 ID~g~~~~~~~~~~~~~~~~~~~~~pis~as~~QR~GR~-----GR~~g~~~~~y~y 309 (459)
T 2z83_A 258 IDCRKSVKPTILEEGEGRVILGNPSPITSASAAQRRGRV-----GRNPNQVGDEYHY 309 (459)
T ss_dssp EECCEECCEEEECSSSCEEEECSCEECCHHHHHHHHTTS-----SCCTTCCCEEEEE
T ss_pred EECCCCEEEEEEECCCCCEEEECCEEECHHHHHHHHHCC-----CCCCCCCEEEEEE
T ss_conf 979983467873268888177031566799984124157-----8888886379997