HHsearch results for GI: 254780130 and protein with PDBid: 3gfp_A
>3gfp_A DEAD box protein 5; mRNA export, ATPase, RECA-fold, ATP-binding, cytoplasm, helicase, hydrolase, membrane, mRNA transport; 1.80A {Saccharomyces cerevisiae} PDB: 2kbf_A
Probab=99.58 E-value=6.7e-15 Score=100.76 Aligned_cols=112 Identities=14% Similarity=0.164 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHH
Q ss_conf 2343349999861489971105789999999876530----------477823489999997278986999721443233
Q gi|254780130|r 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 (205)
Q Consensus 53 ~~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~~----------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~G 122 (205)
..|+++|.++++..+..++||||++....+.|.+.|. +..+..+|...++.|++++.++++++ .+++.|
T Consensus 22 ~~K~~~L~~ll~~~~~~k~lIF~~s~~~~~~l~~~L~~~g~~~~~ih~~~~~~~R~~~~~~f~~~~~~ilv~T-~~~~~G 100 (189)
T 3gfp_A 22 ADKFDVLTELYGLMTIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITT-NVLARG 100 (189)
T ss_dssp THHHHHHHHHHHHCCCSCEEEEESCHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHHTSCSEEEEE-TTTTTS
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEE-ECCCCC
T ss_conf 9999999999973899979999797899999999998689989999799999999999988514885156664-012254
Q ss_pred HHHHHHCCEEEEECCCC------CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
Q ss_conf 22432067589726899------9888022555576665420265775399999838
Q gi|254780130|r 123 LNLQYGGNILVFFSLWW------DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 (205)
Q Consensus 123 lnL~~a~~~vI~~~~~~------n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~ 173 (205)
+|++. ++++|+|++|| ||..|.|+.||. .|.|++..| +.|++.
T Consensus 101 id~~~-~~~vi~~d~p~~~~~~~~~~~yiqRiGR~-----gR~g~~g~~--i~~~~~ 149 (189)
T 3gfp_A 101 IDIPT-VSMVVNYDLPTLANGQADPATYIHRIGRT-----GRFGRKGVA--ISFVHD 149 (189)
T ss_dssp TTCCC-CSEEEESSCCBCTTSCBCHHHHHHHHTTS-----SCTTCCCEE--EEEECS
T ss_pred CCCCC-EEEEEEECCCCCCCCCCCHHHHHHHHCCC-----CCCCCCCEE--EEEECC
T ss_conf 45245-51899947986333436999999872630-----558996479--999760