HHsearch results for GI: 254780130 and protein with PDBid: 3h1t_A
>3h1t_A Type I site-specific restriction-modification system, R (restriction) subunit; hydrolase, restriction enzyme HSDR, ATP-binding; 2.30A {Vibrio vulnificus}
Probab=97.75 E-value=9.4e-05 Score=44.62 Aligned_cols=99 Identities=11% Similarity=0.039 Sum_probs=67.2
Q ss_pred CCCCEEEHHHHHHHHHHHHHHHHC-----------------CCCHHHHHHHHHHH---HCCCCCEEEECHHHHHHHHHHH
Q ss_conf 899711057899999998765304-----------------77823489999997---2789869997214432332243
Q gi|254780130|r 67 NAAPIIVAYHFNSDLARLQKAFPQ-----------------GRTLDKDPCTIQEW---NEGKIPLLFAHPASCGHGLNLQ 126 (205)
Q Consensus 67 ~~~kviVf~~f~~~l~~l~~~~~~-----------------~~~~~~r~~~i~~f---~~~~~~Vll~~~~a~g~GlnL~ 126 (205)
...+.+||+.-....+.+...|.. +.....++..++.| .++..+|+++. ...++|++..
T Consensus 438 ~~~k~iif~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~k~~i~~f~~~~~~~~~Ilisv-~~L~tG~DvP 516 (590)
T 3h1t_A 438 RFAKTIVFCVDQEHADEMRRALNNLNSDLSRKHPDYVARVTSEEGKIGKGHLSRFQELETSTPVILTTS-QLLTTGVDAP 516 (590)
T ss_dssp TTSEEEEEESSHHHHHHHHHHHHHHTHHHHTTCTTSEEECSSTTHHHHHHHHHHHHCTTCCCCCEEEES-STTTTTCCCT
T ss_pred CCCCEEHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEC-CHHHHHHCHH
T ss_conf 444201011889999999999998526664106751899825873558999999861315995699997-9275545858
Q ss_pred HHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC---CCCCEEEEEEEE
Q ss_conf 2067589726899988802255557666542026---577539999983
Q gi|254780130|r 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG---FKRAVFVYYLIA 172 (205)
Q Consensus 127 ~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~G---Q~~~v~v~~l~~ 172 (205)
. ++++||+.+.-|+..+.|++||.. |.- .|..+.|+.++.
T Consensus 517 ~-~~~vv~~~~~~S~~~~~Q~iGR~~-----R~~~~~gK~~~~I~D~~g 559 (590)
T 3h1t_A 517 T-CKNVVLARVVNSMSEFKQIVGRGT-----RLREDYGKLWFNIIDYTG 559 (590)
T ss_dssp T-EEEEEEESCCCCHHHHHHHHTTSC-----CCBGGGTBSCEEEEECSS
T ss_pred H-HCEEEEECCCCCHHHHHHHHHCCC-----CCCCCCCCCEEEEEECCC
T ss_conf 6-298999527897889999996844-----658767988799994487