Probab=99.71 E-value=4.8e-17 Score=111.32 Aligned_cols=124 Identities=18% Similarity=0.201 Sum_probs=100.0
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHH
Q ss_conf 72343349999861489971105789999999876530----------47782348999999727898699972144323
Q gi|254780130|r 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 (205)
Q Consensus 52 ~~~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~~----------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~ 121 (205)
...|+++|.++++.. +.++|||++...+.+.|...|. ++....+|..++++|.+++.++++++ .+++.
T Consensus 13 ~~~K~~~L~~ll~~~-~~k~IIF~~s~~~~~~l~~~L~~~g~~~~~~~~~~~~~~r~~~~~~f~~~~~~ilv~T-~~~~~ 90 (155)
T d1hv8a2 13 ENERFEALCRLLKNK-EFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQREKVIRLFKQKKIRILIAT-DVMSR 90 (155)
T ss_dssp GGGHHHHHHHHHCST-TCCEEEECSSHHHHHHHHHHHHHTTCCEEEECSSSCHHHHHHHHHHHHTTSSSEEEEC-TTHHH
T ss_pred HHHHHHHHHHHHCCC-CCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEH-HHHHH
T ss_conf 399999999997269-9989999794489988876523343222233331001134566655412111255303-67765
Q ss_pred HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHH
Q ss_conf 322432067589726899988802255557666542026577539999983889589999999999
Q gi|254780130|r 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 (205)
Q Consensus 122 GlnL~~a~~~vI~~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l~~K 187 (205)
|+|++. ++++|+|++|||+..|.|+.||. .|.|++..+ +.++.+. |...++.+.++
T Consensus 91 Gid~~~-v~~Vi~~d~p~~~~~y~qr~GR~-----gR~g~~g~~--i~~~~~~--d~~~~~~i~~~ 146 (155)
T d1hv8a2 91 GIDVND-LNCVINYHLPQNPESYMHRIGRT-----GRAGKKGKA--ISIINRR--EYKKLRYIERA 146 (155)
T ss_dssp HCCCSC-CSEEEESSCCSCHHHHHHHSTTT-----CCSSSCCEE--EEEECTT--SHHHHHHHHHH
T ss_pred HHHHCC-CCEEEEECCCCCHHHHHHHHHHC-----CCCCCCCEE--EEEECHH--HHHHHHHHHHH
T ss_conf 432212-76799964999999999887763-----747997369--9998668--99999999999
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Putative DEAD box RNA helicase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]