HHSEARCH alignment of GI: 254780130 and SCOP domain: d2p6ra4

Alignment
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=98.86  E-value=2.2e-09  Score=68.98  Aligned_cols=77  Identities=19%  Similarity=0.323  Sum_probs=60.0

Q ss_pred             CCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCEEEE-------ECCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             77823489999997278986999721443233224320675897-------26899988802255557666542026577
Q gi|254780130|r   91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF-------FSLWWDLEEHQQMIERIGVTRQRQAGFKR  163 (205)
Q Consensus        91 ~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~GlnL~~a~~~vI~-------~~~~~n~~~~~Qa~~Ri~~~r~hR~GQ~~  163 (205)
                      +.+...|..+.+.|+++.++|++++. +.+.|+|+. +.+++|.       ++.++++..+.|..||.     -|.|+..
T Consensus       103 ~l~~~~r~~ie~~f~~g~i~vlvaT~-~l~~Gin~p-~~~vvi~~~~~~d~~~~~~~~~~~~q~~GRA-----GR~g~~~  175 (201)
T d2p6ra4         103 GLLNGQRRVVEDAFRRGNIKVVVATP-TLAAGVNLP-ARRVIVRSLYRFDGYSKRIKVSEYKQMAGRA-----GRPGMDE  175 (201)
T ss_dssp             TSCHHHHHHHHHHHHTTSCCEEEECS-TTTSSSCCC-BSEEEECCSEEESSSEEECCHHHHHHHHTTB-----SCTTTCS
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEECH-HHHHHCCCC-CCEEEEECCEECCCCCCCCCHHHHHHHHCCC-----CCCCCCC
T ss_conf             76256689999998679814997041-887523799-7469995142046874779999999875446-----8999997


Q ss_pred             CEEEEEEEECC
Q ss_conf             53999998388
Q gi|254780130|r  164 AVFVYYLIAQN  174 (205)
Q Consensus       164 ~v~v~~l~~~~  174 (205)
                      .-.++.+..+.
T Consensus       176 ~G~~~l~~~~~  186 (201)
T d2p6ra4         176 RGEAIIIVGKR  186 (201)
T ss_dssp             CEEEEEECCGG
T ss_pred             EEEEEEEECCC
T ss_conf             25999996898


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Hel308 helicase
species: Archaeoglobus fulgidus [TaxId: 2234]