HHSEARCH alignment of GI: 254780130 and SCOP domain: d2rb4a1

Alignment

Probab=99.59  E-value=2.7e-15  Score=101.67  Aligned_cols=124  Identities=20%  Similarity=0.290  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH----------CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHH
Q ss_conf             2343349999861489971105789999999876530----------477823489999997278986999721443233
Q gi|254780130|r   53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG  122 (205)
Q Consensus        53 ~~Kl~~l~~ii~~~~~~kviVf~~f~~~l~~l~~~~~----------~~~~~~~r~~~i~~f~~~~~~Vll~~~~a~g~G  122 (205)
                      ..|++.|.++++.....+++||+++....+.|...+.          +......|..+++.|.+++.++++++ .+++.|
T Consensus        17 ~~K~~~L~~ll~~~~~~~~lIF~~~~~~~~~l~~~l~~~~~~~~~~hg~~~~~~R~~~~~~F~~g~~~ilv~T-d~~~~G   95 (168)
T d2rb4a1          17 KDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITT-NVCARG   95 (168)
T ss_dssp             HHHHHHHHHHHTTSCCSEEEEECSCHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHTTSCSEEEEC-CSCCTT
T ss_pred             HHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHCCCCEEEEECH-HHHHHH
T ss_conf             8999999999986798857997188899999999998647762102331156777877633137960034112-454321


Q ss_pred             HHHHHHCCEEEEECCCCC------HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHH
Q ss_conf             224320675897268999------88802255557666542026577539999983889589999999999
Q gi|254780130|r  123 LNLQYGGNILVFFSLWWD------LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK  187 (205)
Q Consensus       123 lnL~~a~~~vI~~~~~~n------~~~~~Qa~~Ri~~~r~hR~GQ~~~v~v~~l~~~~tiEe~i~~~l~~K  187 (205)
                      +|++. .++||+||+||+      +..|.|+.||.     .|.|++.  .++.|++.+  |...+..+.++
T Consensus        96 id~~~-v~~Vi~yd~P~~~~~~~~~~~yihR~GR~-----gR~g~~g--~~i~~~~~~--d~~~l~~i~~~  156 (168)
T d2rb4a1          96 IDVKQ-VTIVVNFDLPVKQGEEPDYETYLHRIGRT-----GRFGKKG--LAFNMIEVD--ELPSLMKIQDH  156 (168)
T ss_dssp             TCCTT-EEEEEESSCCC--CCSCCHHHHHHHHCBC---------CCE--EEEEEECGG--GHHHHHHHHHH
T ss_pred             HCCCC-CCEEEEECCCCCCCCCCCHHHHHHHHHHC-----CCCCCCE--EEEEEECHH--HHHHHHHHHHH
T ss_conf             10466-42798525898644558999998886433-----6689944--899997689--99999999999

SCOP domain information

class:
fold:
superfamily:
family:
domain:
species: