BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780130|ref|YP_003064543.1| hypothetical protein CLIBASIA_00045 [Candidatus Liberibacter asiaticus str. psy62] (205 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done >gi|323159216|gb|EFZ45206.1| DEAD box helicase [Escherichia coli E128010] Length = 435 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 233 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 292 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 293 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 352 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 353 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 412 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 413 ERRNSKRTVQDILLDAMKKRGI 434 >gi|218555139|ref|YP_002388052.1| hypothetical protein ECIAI1_2669 [Escherichia coli IAI1] gi|218361907|emb|CAQ99507.1| conserved hypothetical protein from bacteriophage origin [Escherichia coli IAI1] Length = 464 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|191174014|ref|ZP_03035531.1| dead box helicase [Escherichia coli F11] gi|190905705|gb|EDV65327.1| dead box helicase [Escherichia coli F11] gi|324014343|gb|EGB83562.1| SNF2 domain protein [Escherichia coli MS 60-1] Length = 464 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|323173123|gb|EFZ58754.1| DEAD box helicase [Escherichia coli LT-68] Length = 433 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 164/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 231 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDAGSWSELHDTKLQALDS 290 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 291 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 350 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GG ILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 351 GLNMQDGGYILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 410 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 411 ERRNSKRTVQDILLDAMKKRGI 432 >gi|194429287|ref|ZP_03061814.1| dead box helicase [Escherichia coli B171] gi|194412695|gb|EDX28990.1| dead box helicase [Escherichia coli B171] Length = 464 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|188492213|ref|ZP_02999483.1| dead box helicase [Escherichia coli 53638] gi|188487412|gb|EDU62515.1| dead box helicase [Escherichia coli 53638] gi|332088071|gb|EGI93196.1| DEAD box helicase [Shigella boydii 5216-82] Length = 464 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE+IEA N+A+KT KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGESIEAPNAAAKTQKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|291283833|ref|YP_003500651.1| Superfamily II DNA/RNA helicases, SNF2 family [Escherichia coli O55:H7 str. CB9615] gi|290763706|gb|ADD57667.1| Superfamily II DNA/RNA helicases, SNF2 family [Escherichia coli O55:H7 str. CB9615] Length = 463 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GA+Y D+ W E+HD K++AL+ Sbjct: 261 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGALYTDDTGSWSELHDTKLQALDS 320 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 321 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 380 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 381 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 440 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 441 ERRNSKRTVQDILLDAMKKRGI 462 >gi|260845245|ref|YP_003223023.1| putative phage-related DNA helicase [Escherichia coli O103:H2 str. 12009] gi|257760392|dbj|BAI31889.1| predicted phage-related DNA helicase [Escherichia coli O103:H2 str. 12009] Length = 464 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRNSKRTVQDILLDAMKKRGI 463 >gi|331654021|ref|ZP_08355022.1| putative protein p41 [Escherichia coli M718] gi|331048870|gb|EGI20946.1| putative protein p41 [Escherichia coli M718] Length = 465 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 263 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 322 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 323 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 382 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 383 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 442 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 443 ERRNSKRTVQDILLDAMKKRGI 464 >gi|238920126|ref|YP_002933641.1| hypothetical protein NT01EI_2232 [Edwardsiella ictaluri 93-146] gi|238869695|gb|ACR69406.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 433 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 121/202 (59%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KTVKCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 231 QQYREMEKEMFLELNGEGIEAPNAAAKTVKCLQIASGAVYTDDTGSWSELHDAKLQALDS 290 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 291 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNAGKIPVLFAHPASAGH 350 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 351 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 410 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QDLLL+A+KK I Sbjct: 411 ERRNSKRTVQDLLLDAMKKRGI 432 >gi|331648305|ref|ZP_08349394.1| putative protein p41 [Escherichia coli M605] gi|331042854|gb|EGI14995.1| putative protein p41 [Escherichia coli M605] Length = 464 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 164/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGSWSELHDTKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS H Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASASH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LLNA+KK I Sbjct: 442 ERRNSKRTVQDILLNAMKKRGI 463 >gi|295096884|emb|CBK85974.1| Superfamily II DNA/RNA helicases, SNF2 family [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 466 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 117/202 (57%), Positives = 163/202 (80%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + ++E++ +L G+ IEA N+A+KTVKCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 264 QHYREMEKEMFLELNGKGIEAPNAAAKTVKCLQIASGAVYTDDAGSWSELHDAKLQALDS 323 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL+KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 324 ILTEAAGAPVLVAYHWKHDLERLRKAFPKGRHLDQDPQTLRDWNAGKIPVLFAHPASAGH 383 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA T+DE+V+ Sbjct: 384 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIATGTMDEMVM 443 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K +QD+LL+A+KK I Sbjct: 444 ERRNSKRKVQDILLDAMKKRGI 465 >gi|330862108|emb|CBX72272.1| putative protein p41 [Yersinia enterocolitica W22703] Length = 432 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 159/202 (78%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + ++E++ + +IEA N+ASKT+KCLQLA+GA+Y DE +W E+HD K++ALE I Sbjct: 231 QYKEMEKEMFLQIGDHDIEAMNAASKTMKCLQLASGAIYTDEAGNWTEIHDAKLQALESI 290 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + +A+ P++VAYHF SDL RL KAFP+GR LD DP T ++WN G IP+LFAHPAS GHG Sbjct: 291 VAEASGMPVLVAYHFKSDLTRLLKAFPKGRHLDADPQTQRDWNAGLIPVLFAHPASAGHG 350 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNIL FFS WWDLE++QQ+IERIG TRQ QAG KR V++Y++IA++T+DELV + Sbjct: 351 LNLQDGGNILAFFSHWWDLEQYQQIIERIGPTRQAQAGHKRPVWIYHIIAEDTVDELVKE 410 Query: 183 RLRTKSTIQDLLLNALKKETIH 204 R +K +QD+LL A+KK + Sbjct: 411 RRDSKREVQDILLEAMKKRGLR 432 >gi|332160953|ref|YP_004297530.1| Dead box helicase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665183|gb|ADZ41827.1| Dead box helicase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 432 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 120/202 (59%), Positives = 160/202 (79%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + ++E++ + +IEA N+ASKT+KCLQLA+GA+Y DE +W E+HD K++ALE I Sbjct: 231 QYKEMEKEMFLQIGDHDIEAMNAASKTMKCLQLASGAIYTDEAGNWTEIHDAKLQALESI 290 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + +A+ P++VAYHF SDLARL KAFP+GR LD DP T ++WN G IP+LFAHPAS GHG Sbjct: 291 VAEASGMPVLVAYHFKSDLARLLKAFPKGRHLDADPQTQRDWNAGLIPVLFAHPASAGHG 350 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNIL FFS WWDLE++QQ+IERIG TRQ QAG KR V++Y++IA++T+DELV + Sbjct: 351 LNLQDGGNILAFFSHWWDLEQYQQIIERIGPTRQAQAGHKRPVWIYHIIAEDTVDELVKE 410 Query: 183 RLRTKSTIQDLLLNALKKETIH 204 R +K +QD+LL A+KK + Sbjct: 411 RRDSKREVQDILLEAMKKRGLR 432 >gi|262043428|ref|ZP_06016553.1| SNF2 domain protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039254|gb|EEW40400.1| SNF2 domain protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 464 Score = 178 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 120/202 (59%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KTVKCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 262 QQYREMEKEMFLELNGEGIEAPNAAAKTVKCLQIASGAVYTDDAGSWSELHDAKLQALDS 321 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 322 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNAGKIPVLFAHPASAGH 381 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 382 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAVDTMDEMVM 441 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 442 ERRDSKRTVQDILLDAMKKRGI 463 >gi|170023443|ref|YP_001719948.1| hypothetical protein YPK_1197 [Yersinia pseudotuberculosis YPIII] gi|169749977|gb|ACA67495.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII] Length = 463 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 121/202 (59%), Positives = 159/202 (78%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + ++E++ + IEA N+ASKT+KCLQLA+GA+Y DE +W E+HD K++ALE I Sbjct: 262 QYKEMEKEMFLQIGDHGIEAMNAASKTMKCLQLASGAIYTDEAGNWTEIHDAKLQALESI 321 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I +A+ P++VAYHF SDLARL KAFP+GR LD DP T ++WN G IP+LFAHPAS GHG Sbjct: 322 ITEASGMPVLVAYHFKSDLARLLKAFPKGRHLDADPQTQRDWNAGLIPVLFAHPASAGHG 381 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GGNIL FFS WWDLE++QQ+IERIG TRQ QAG KR V++Y++IA++T+DELV + Sbjct: 382 LNLQDGGNILAFFSHWWDLEQYQQIIERIGPTRQAQAGHKRPVWIYHIIAEDTVDELVKE 441 Query: 183 RLRTKSTIQDLLLNALKKETIH 204 R +K +QD+LL A+KK + Sbjct: 442 RRDSKREVQDILLEAMKKRGLR 463 >gi|204927042|ref|ZP_03218244.1| dead box helicase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323707|gb|EDZ08902.1| dead box helicase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 463 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 163/202 (80%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KTVKCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 261 QQYREMEKEMFLELNGEGIEAPNAAAKTVKCLQIASGAVYTDDAGSWSELHDAKLQALDS 320 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+ P T+++WN GKIP+LFAHPAS GH Sbjct: 321 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQGPQTLRDWNAGKIPVLFAHPASAGH 380 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++I +T+DE+V+ Sbjct: 381 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIITADTMDEMVM 440 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 +R +K T+QD+LL+A+KK I Sbjct: 441 ERRNSKRTVQDILLDAMKKRGI 462 >gi|212712312|ref|ZP_03320440.1| hypothetical protein PROVALCAL_03400 [Providencia alcalifaciens DSM 30120] gi|212685058|gb|EEB44586.1| hypothetical protein PROVALCAL_03400 [Providencia alcalifaciens DSM 30120] Length = 463 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 122/200 (61%), Positives = 163/200 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + ++E++ +L+ E +EA N+A+KTVKCLQ+A+GA+Y D+ K+W E+HD KI+ALE Sbjct: 264 KQYQEMEKEMFLELEHEGVEALNAAAKTVKCLQIASGAIYTDDSKNWVELHDTKIQALES 323 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II ++ PI+VAYH+ DL RL KAFP+GR LD DP T+++WN GKIP+LFAHPAS GH Sbjct: 324 IISESGGMPILVAYHWKHDLERLLKAFPKGRNLDADPQTLRDWNAGKIPILFAHPASAGH 383 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG+ R VF+++LIA T+DE+V+ Sbjct: 384 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGYNRPVFIHHLIAAGTMDEVVM 443 Query: 182 QRLRTKSTIQDLLLNALKKE 201 +R +K IQDLLL A+K++ Sbjct: 444 ERRNSKREIQDLLLEAMKRK 463 >gi|255764515|ref|YP_003065608.2| SNF2 related [Candidatus Liberibacter asiaticus str. psy62] gi|254547866|gb|ACT57668.2| SNF2 related [Candidatus Liberibacter asiaticus str. psy62] Length = 458 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 254 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 313 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 314 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 373 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 374 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 433 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 434 LQRLRTKSTIQDLLLNALKKETIHV 458 >gi|317120757|gb|ADV02578.1| SNF2 Dead box helicase [Candidatus Liberibacter asiaticus] Length = 460 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 256 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 316 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 375 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 376 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 435 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 436 LQRLRTKSTIQDLLLNALKKETIHV 460 >gi|317120700|gb|ADV02523.1| SNF2 Dead box helicase [Liberibacter phage SC1] gi|317120743|gb|ADV02565.1| SNF2 Dead box helicase [Liberibacter phage SC2] gi|317120804|gb|ADV02625.1| SNF2 Dead box helicase [Candidatus Liberibacter asiaticus] Length = 461 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 257 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 316 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 317 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 376 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 377 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 436 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 437 LQRLRTKSTIQDLLLNALKKETIHV 461 >gi|82777983|ref|YP_404332.1| hypothetical protein SDY_2798 [Shigella dysenteriae Sd197] gi|309784630|ref|ZP_07679265.1| DEAD box helicase [Shigella dysenteriae 1617] gi|81242131|gb|ABB62841.1| hypothetical bacteriophage protein [Shigella dysenteriae Sd197] gi|308927527|gb|EFP72999.1| DEAD box helicase [Shigella dysenteriae 1617] Length = 311 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 165/202 (81%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ Sbjct: 109 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDAGSWSELHDTKLQALDS 168 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A AP++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GH Sbjct: 169 ILTEAAGAPVLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGH 228 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+ Sbjct: 229 GLNMQDGGNILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVM 288 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 ++ +K T+QD+LL+A+KK I Sbjct: 289 EQRNSKRTVQDILLDAMKKRGI 310 >gi|317120844|gb|ADV02665.1| SNF2 Dead box helicase [Candidatus Liberibacter asiaticus] Length = 461 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 200/205 (97%), Positives = 203/205 (99%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y KFQREL+CD+QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 257 LKLYRKFQRELFCDIQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 316 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 317 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 376 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 377 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 436 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 437 LQRLRTKSTIQDLLLNALKKETIHV 461 >gi|48697218|ref|YP_024948.1| putative helicase protein [Burkholderia phage BcepC6B] gi|47779024|gb|AAT38387.1| gp28 [Burkholderia phage BcepC6B] Length = 459 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 117/205 (57%), Positives = 157/205 (76%), Gaps = 5/205 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHDEKI 56 + Y +R+++ ++ IEA N+ASKT+KCLQLANGAVY E+ W EVHD K+ Sbjct: 252 RLYRDMERQMFMEIDDSPIEAMNAASKTMKCLQLANGAVYKQEDDGSDTAPWHEVHDLKL 311 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 +ALE I+E+A P++VAYHF SDLARLQ+AFP+GR LD++P TI++WN GKIP++FAHP Sbjct: 312 QALEEIVEEAAGMPVLVAYHFKSDLARLQRAFPRGRQLDQNPQTIRDWNAGKIPVMFAHP 371 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS GHGLNLQ GGNIL F WW+LEE+ Q++ERIG RQ QAG +R VF+Y +IA++TI Sbjct: 372 ASAGHGLNLQDGGNILAVFGHWWNLEEYLQIVERIGPVRQLQAGHRRPVFIYPIIARDTI 431 Query: 177 DELVLQRLRTKSTIQDLLLNALKKE 201 DE V++R TK +QD+LL+A+K+ Sbjct: 432 DEDVVERRETKRAVQDILLDAMKRR 456 >gi|9633588|ref|NP_051002.1| hypothetical protein APSE-1_41 [Acyrthosiphon pisum bacteriophage APSE-1] gi|9910955|sp|Q9T1Q7|VP41_BPAPS RecName: Full=Putative protein p41 gi|6118036|gb|AAF03984.1|AF157835_41 P41 [Endosymbiont phage APSE-1] Length = 460 Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats. Identities = 115/198 (58%), Positives = 159/198 (80%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ ++W E+HD KI+ALE I+ Sbjct: 263 YHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNRNWTEIHDAKIQALESIV 322 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ +WN GKIPLLFAHPASCGHGL Sbjct: 323 NESGGTPVLVAYHWKHDLERLLKAFPKGKNLDANPRTLTDWNNGKIPLLFAHPASCGHGL 382 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V++R Sbjct: 383 NLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVMER 442 Query: 184 LRTKSTIQDLLLNALKKE 201 +K IQDLLL A+K++ Sbjct: 443 RNSKRAIQDLLLEAMKRK 460 >gi|254780130|ref|YP_003064543.1| hypothetical protein CLIBASIA_00045 [Candidatus Liberibacter asiaticus str. psy62] gi|254039807|gb|ACT56603.1| hypothetical protein CLIBASIA_00045 [Candidatus Liberibacter asiaticus str. psy62] Length = 205 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 205/205 (100%), Positives = 205/205 (100%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE Sbjct: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG Sbjct: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV Sbjct: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 LQRLRTKSTIQDLLLNALKKETIHV Sbjct: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 >gi|212499736|ref|YP_002308544.1| DEAD box helicase [Bacteriophage APSE-2] gi|238898727|ref|YP_002924408.1| APSE-2 prophage; DEAD box helicase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|75906050|gb|ABA29396.1| DEAD box helicase [Bacteriophage APSE-2] gi|211731705|gb|ACJ10193.1| DEAD box helicase [Bacteriophage APSE-2] gi|229466486|gb|ACQ68260.1| APSE-2 prophage; DEAD box helicase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 460 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 113/198 (57%), Positives = 154/198 (77%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y ++EL+ +L IEA N+A+KT+K LQ+A GA+Y D+ +W +HD KI+ALE I+ Sbjct: 263 YQAMEKELFLELGDSAIEALNAAAKTIKTLQIAAGAIYSDDNHNWTAIHDAKIQALESIV 322 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGHGL Sbjct: 323 NESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGHGL 382 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V++R Sbjct: 383 NLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVMER 442 Query: 184 LRTKSTIQDLLLNALKKE 201 +K IQDLLL A+K++ Sbjct: 443 RNSKRAIQDLLLEAMKRK 460 >gi|315121969|ref|YP_004062458.1| SNF2 related protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495371|gb|ADR51970.1| SNF2 related protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 456 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 151/200 (75%), Positives = 178/200 (89%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y KFQREL+C++QGE + AFNSASKTVKCLQLANGAVY DE WKEVH+ KI+AL+ Sbjct: 255 LKLYRKFQRELFCEIQGEPLVAFNSASKTVKCLQLANGAVYTDENHSWKEVHNAKIEALK 314 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E+A P++VAYHFNSDL RL KAFPQGR LDK+P TI++WN GKIPLLFAHPASC Sbjct: 315 AIVEEAGGCPLLVAYHFNSDLMRLFKAFPQGRHLDKNPQTIKDWNAGKIPLLFAHPASCA 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLE HQQMIERIG RQ+QAGFKRAVF++YLIA++TIDEL+ Sbjct: 375 HGLNLQYGGNILVFFSLWWDLETHQQMIERIGPLRQKQAGFKRAVFIHYLIAEHTIDELI 434 Query: 181 LQRLRTKSTIQDLLLNALKK 200 L+RL+TK+T+Q++LLNALKK Sbjct: 435 LKRLQTKATVQEILLNALKK 454 >gi|41179407|ref|NP_958716.1| Bbp47 [Bordetella phage BPP-1] gi|45569539|ref|NP_996608.1| DEAD box helicase [Bordetella phage BMP-1] gi|45580790|ref|NP_996656.1| DEAD box helicase [Bordetella phage BIP-1] gi|40950146|gb|AAR97712.1| Bbp47 [Bordetella phage BPP-1] Length = 464 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 124/202 (61%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKAL 59 + Y +RE + L+ G IEAFN+ASKT+KCLQLANGA+Y D+ W +VHD K++AL Sbjct: 261 RLYRDMEREAFLALECGIEIEAFNAASKTIKCLQLANGAIYTDDTATTWADVHDVKLQAL 320 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 E I+ +A P++VAYHF SDLARLQ+AFPQGR LD++P TI++WN GKIPLLFAHPAS Sbjct: 321 ESIVAEAAGMPVLVAYHFKSDLARLQRAFPQGRALDQNPQTIRDWNAGKIPLLFAHPASA 380 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+Y+++A +T+DEL Sbjct: 381 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHDRPVFIYHIVATDTMDEL 440 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 441 VMARRESKREVQDLLLEAMKRR 462 >gi|71898992|ref|ZP_00681158.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71731238|gb|EAO33303.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPETIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG KR VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHKRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71276270|ref|ZP_00652548.1| SNF2-related [Xylella fastidiosa Dixon] gi|71162878|gb|EAO12602.1| SNF2-related [Xylella fastidiosa Dixon] Length = 472 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 120/202 (59%), Positives = 160/202 (79%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG KR VF+++++A NT+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHKRPVFIHHIVAANTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71900964|ref|ZP_00683077.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71729269|gb|EAO31387.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 120/202 (59%), Positives = 160/202 (79%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG KR VF+++++A NT+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHKRPVFIHHIVAANTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|28199029|ref|NP_779343.1| hypothetical protein PD1137 [Xylella fastidiosa Temecula1] gi|182681751|ref|YP_001829911.1| SNF2-related protein [Xylella fastidiosa M23] gi|28057127|gb|AAO28992.1| phage-related protein [Xylella fastidiosa Temecula1] gi|182631861|gb|ACB92637.1| SNF2-related protein [Xylella fastidiosa M23] gi|307580180|gb|ADN64149.1| SNF2-related protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 472 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 157/202 (77%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71899887|ref|ZP_00682035.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71730327|gb|EAO32410.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 157/202 (77%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71902063|ref|ZP_00684103.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71728174|gb|EAO30365.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71901323|ref|ZP_00683419.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71728907|gb|EAO31042.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG KR VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHKRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71275472|ref|ZP_00651758.1| SNF2-related [Xylella fastidiosa Dixon] gi|71163772|gb|EAO13488.1| SNF2-related [Xylella fastidiosa Dixon] Length = 472 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|28198299|ref|NP_778613.1| hypothetical protein PD0382 [Xylella fastidiosa Temecula1] gi|28199082|ref|NP_779396.1| hypothetical protein PD1194 [Xylella fastidiosa Temecula1] gi|182680936|ref|YP_001829096.1| SNF2-related protein [Xylella fastidiosa M23] gi|182681808|ref|YP_001829968.1| SNF2-related protein [Xylella fastidiosa M23] gi|28056369|gb|AAO28262.1| phage-related protein [Xylella fastidiosa Temecula1] gi|28057180|gb|AAO29045.1| phage-related protein [Xylella fastidiosa Temecula1] gi|182631046|gb|ACB91822.1| SNF2-related protein [Xylella fastidiosa M23] gi|182631918|gb|ACB92694.1| SNF2-related protein [Xylella fastidiosa M23] gi|307579404|gb|ADN63373.1| SNF2-related protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 472 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 157/202 (77%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|170729638|ref|YP_001775071.1| hypothetical protein Xfasm12_0427 [Xylella fastidiosa M12] gi|167964431|gb|ACA11441.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 472 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71898924|ref|ZP_00681091.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71731336|gb|EAO33400.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNILVFF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILVFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|71274496|ref|ZP_00650784.1| SNF2-related [Xylella fastidiosa Dixon] gi|71900325|ref|ZP_00682460.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71164228|gb|EAO13942.1| SNF2-related [Xylella fastidiosa Dixon] gi|71729900|gb|EAO31996.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 472 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 119/202 (58%), Positives = 159/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A NT+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAANTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|315122937|ref|YP_004063426.1| SNF2 related protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496339|gb|ADR52938.1| SNF2 related protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 456 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 151/200 (75%), Positives = 179/200 (89%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y KFQREL+C++QGE + AFNSASKTVKCLQLANGAVY DE WKEVH+ KI+AL+ Sbjct: 255 LKLYRKFQRELFCEIQGEPLVAFNSASKTVKCLQLANGAVYTDESHSWKEVHNAKIEALK 314 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E+A +P++VAYHFNSDL RL KAFPQGR LDK+P TI++WN GKIPLLFAHPASC Sbjct: 315 AIVEEAGRSPVLVAYHFNSDLMRLFKAFPQGRHLDKNPQTIKDWNAGKIPLLFAHPASCA 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNILVFFSLWWDLE HQQMIERIG RQ+QAGFKRAVF++YLIA++TIDEL+ Sbjct: 375 HGLNLQYGGNILVFFSLWWDLETHQQMIERIGTLRQKQAGFKRAVFIHYLIAEHTIDELI 434 Query: 181 LQRLRTKSTIQDLLLNALKK 200 L+RL+TK+T+Q++LLNALKK Sbjct: 435 LKRLQTKATVQEILLNALKK 454 >gi|28199605|ref|NP_779919.1| hypothetical protein PD1730 [Xylella fastidiosa Temecula1] gi|182682346|ref|YP_001830506.1| SNF2-related protein [Xylella fastidiosa M23] gi|28057720|gb|AAO29568.1| phage-related protein [Xylella fastidiosa Temecula1] gi|182632456|gb|ACB93232.1| SNF2-related protein [Xylella fastidiosa M23] gi|307578627|gb|ADN62596.1| SNF2-related protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 472 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG +R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHQRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|273810423|ref|YP_003344894.1| helicase [Xylella phage Xfas53] gi|257097798|gb|ACV41104.1| helicase [Xylella phage Xfas53] Length = 472 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG +R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHQRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|170730331|ref|YP_001775764.1| hypothetical protein Xfasm12_1183 [Xylella fastidiosa M12] gi|167965124|gb|ACA12134.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 295 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 158/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 80 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 139 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 140 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 199 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 200 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 259 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 260 VMARRESKREVQDLLLEAVKRR 281 >gi|15837282|ref|NP_297970.1| hypothetical protein XF0680 [Xylella fastidiosa 9a5c] gi|9105562|gb|AAF83490.1|AE003912_2 phage-related protein [Xylella fastidiosa 9a5c] Length = 472 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 117/201 (58%), Positives = 157/201 (78%), Gaps = 2/201 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y ++E++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQEMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ RLQ+AFP+GR LD+ P TI++WN G IP+LFAHPAS Sbjct: 317 HEIIEEAAGMPVLVAYHFKSDVTRLQRAFPKGRVLDQHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ++ERIG TRQ QAG R VF+++++A NT+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIVERIGPTRQAQAGHDRPVFIHHIVAANTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKR 457 >gi|71901494|ref|ZP_00683581.1| SNF2-related [Xylella fastidiosa Ann-1] gi|71728750|gb|EAO30894.1| SNF2-related [Xylella fastidiosa Ann-1] Length = 464 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 118/202 (58%), Positives = 159/202 (78%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKHPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNILVFF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILVFFGHWWDLEQYQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A++++ Sbjct: 437 VMARRESKREVQDLLLEAVRRK 458 >gi|15839118|ref|NP_299806.1| hypothetical protein XF2528 [Xylella fastidiosa 9a5c] gi|9107736|gb|AAF85326.1|AE004060_1 phage-related protein [Xylella fastidiosa 9a5c] Length = 472 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 116/202 (57%), Positives = 155/202 (76%), Gaps = 2/202 (0%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y ++E+ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKTMEQEMLIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LD+ P T+++WN G IP+LF HPAS Sbjct: 317 HEIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRVLDQHPDTLRDWNAGNIPVLFVHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL FF WWDLE++QQ+IERIG TRQ QAG R VF+++++A T+DEL Sbjct: 377 GHGLNLQDGGNILAFFGHWWDLEQYQQIIERIGPTRQAQAGHDRPVFIHHIVAAGTVDEL 436 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V+ R +K +QDLLL A+K+ Sbjct: 437 VMARRESKREVQDLLLEAVKRR 458 >gi|157311154|ref|YP_001469199.1| helicase [Streptococcus phage P9] gi|119104303|gb|ABL61048.1| helicase [Streptococcus phage P9] Length = 440 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 83/202 (41%), Positives = 121/202 (59%), Gaps = 10/202 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+Y + K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKDKEISAANSAVLVNKLLQMANGAIYDAD-KTTVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + DL RL+K FPQ L + +WN G+IP+L HP S G Sbjct: 306 DIVEESQGQPILVFYQYQHDLERLKKRFPQAEELTS----VDKWNSGRIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQ-----QANARLDRQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQL 438 >gi|323693306|ref|ZP_08107524.1| SNF2 domain-containing protein [Clostridium symbiosum WAL-14673] gi|323502789|gb|EGB18633.1| SNF2 domain-containing protein [Clostridium symbiosum WAL-14673] Length = 447 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 82/197 (41%), Positives = 112/197 (56%), Gaps = 7/197 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + ++EL +L I A N+AS T K QLANGA+ Y + E HD K+ ALE II Sbjct: 256 YEELKQELVLELPDGEITAANAASLTGKLSQLANGAI-YSDTGDTIEFHDRKLDALEDII 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++VAY F DL+R++ K I +WN GKIP+ HPAS GHGL Sbjct: 315 ESANGKPVLVAYWFKHDLSRIK--KRFDVREIKSSKDITDWNAGKIPVAVIHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ L++F L W LE +QQ R+ Q V + ++I + TIDE +L+ Sbjct: 373 NLQAGGSTLIWFGLTWSLELYQQTNARLWRQGQTSG----TVVIEHIITKGTIDERILKA 428 Query: 184 LRTKSTIQDLLLNALKK 200 L K Q+ L++A+K Sbjct: 429 LSKKELTQNALIDAVKA 445 >gi|71911260|ref|YP_282810.1| phage-related DNA helicase [Streptococcus pyogenes MGAS5005] gi|94989079|ref|YP_597180.1| phage-related DNA helicase [Streptococcus pyogenes MGAS9429] gi|94992970|ref|YP_601069.1| phage-related DNA helicase [Streptococcus pyogenes MGAS2096] gi|71854042|gb|AAZ52065.1| phage-related DNA helicase [Streptococcus pyogenes MGAS5005] gi|94542587|gb|ABF32636.1| phage-related DNA helicase [Streptococcus pyogenes MGAS9429] gi|94546478|gb|ABF36525.1| phage-related DNA helicase [Streptococcus pyogenes MGAS2096] Length = 440 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 84/202 (41%), Positives = 122/202 (60%), Gaps = 10/202 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+ YD++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKDKEISAANSAVLANKLLQMANGAI-YDDDKSTVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + D RL+K FPQ L + +WN GKIP+L HP S G Sbjct: 306 DIVEESQGQPILVFYQYQHDFERLKKRFPQAEELTS----VDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQ-----QANARLDRQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQL 438 >gi|167630964|ref|YP_001681463.1| phage-associated helicase, snf2 family [Heliobacterium modesticaldum Ice1] gi|167593704|gb|ABZ85452.1| phage-associated helicase, snf2 family [Heliobacterium modesticaldum Ice1] Length = 452 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 85/199 (42%), Positives = 122/199 (61%), Gaps = 8/199 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y +REL L+G+ I+A ++AS + K LQ+ANGAV Y ++ +H K+ ALE Sbjct: 254 KVYETMKRELVLSLEGQEIDAGSAASLSNKLLQMANGAV-YADDGSVVNIHGRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+E AN P+++AY + DL R+ K FP R D I+ WN+G+IP+ HPAS GH Sbjct: 313 ILEAANGKPVLIAYWYKHDLNRILKRFPAERLDSVDS--IRRWNDGEIPVAVIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F L W LE +QQ R+ + G K V ++++I + TIDE V+ Sbjct: 371 GLNLQAGGSTLVWFGLTWSLELYQQTNARLW-----RQGQKETVVIHHIITKGTIDEQVM 425 Query: 182 QRLRTKSTIQDLLLNALKK 200 + LR K Q L++A+K Sbjct: 426 KALRLKDKTQTALIDAVKA 444 >gi|167757891|ref|ZP_02430018.1| hypothetical protein CLOSCI_00222 [Clostridium scindens ATCC 35704] gi|167664545|gb|EDS08675.1| hypothetical protein CLOSCI_00222 [Clostridium scindens ATCC 35704] Length = 454 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 77/205 (37%), Positives = 112/205 (54%), Gaps = 8/205 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +++Y F+R+L L I A N+A+ + K Q+ANGAV Y ++ +HD K+ ALE Sbjct: 253 VQRYVSFKRDLLLQLPDGEITAANAAALSGKLSQMANGAV-YTDDGETIAIHDRKLDALE 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPA 117 IIE P++VAY F DL R+ + + +I WN G++P+ HPA Sbjct: 312 DIIESMGGKPLLVAYWFRHDLERIAGRLHKLKIPFSRLDSSESIHRWNAGELPVALIHPA 371 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GHGLNLQ GG+ LV+F L W LE +QQ R+ Q V V ++I + TID Sbjct: 372 SAGHGLNLQSGGSTLVWFGLTWSLELYQQTNARLWR----QGQQSDTVVVQHIITKGTID 427 Query: 178 ELVLQRLRTKSTIQDLLLNALKKET 202 E +++ L K T Q L+ A+K + Sbjct: 428 ERIMKALSEKDTTQAALIEAVKADL 452 >gi|320182116|gb|EFW57020.1| DNA polymerase, phage-associated [Shigella boydii ATCC 9905] Length = 533 Score = 151 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 112/187 (59%), Positives = 152/187 (81%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 E IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ I+ +A AP++VAYH Sbjct: 346 DEGIEAPNAAAKTLKCLQIASGAVYTDDAGSWSELHDTKLQALDSILTEAAGAPVLVAYH 405 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GHGLN+Q GG ILVFFS Sbjct: 406 WKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGHGLNMQDGGYILVFFS 465 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+++ +K T+QD+LL+ Sbjct: 466 HWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVMEQRNSKRTVQDILLD 525 Query: 197 ALKKETI 203 A+KK I Sbjct: 526 AMKKRGI 532 >gi|306826832|ref|ZP_07460132.1| SNF2 domain protein [Streptococcus pyogenes ATCC 10782] gi|304430850|gb|EFM33859.1| SNF2 domain protein [Streptococcus pyogenes ATCC 10782] Length = 440 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 85/202 (42%), Positives = 123/202 (60%), Gaps = 10/202 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+ YD++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAI-YDDDKATVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + DL RL+K FPQ L + +WN GKIP+L HP S G Sbjct: 306 NIVEESQGQPILVFYQYQHDLERLKKRFPQAEELTS----VDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQ-----QANARLDRQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQL 438 >gi|225573262|ref|ZP_03782017.1| hypothetical protein RUMHYD_01453 [Blautia hydrogenotrophica DSM 10507] gi|225039394|gb|EEG49640.1| hypothetical protein RUMHYD_01453 [Blautia hydrogenotrophica DSM 10507] Length = 454 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 112/204 (54%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y F+R+L L I A N+A+ + K Q+ANGAVY DE +HD K+ ALE Sbjct: 254 QRYVSFKRDLLLQLPDGEITAANAAALSGKLSQMANGAVYTDE-GETIAIHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPAS 118 IIE P++VAY F DL R+ + + +I+ WN G++P+ HPAS Sbjct: 313 IIESMGGKPLLVAYWFRHDLERITGRLHKLKIPFSRLDSSKSIRRWNSGELPVALIHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+ LV+F L W LE +QQ R+ Q V + ++I + TIDE Sbjct: 373 AGHGLNLQSGGSTLVWFGLTWSLELYQQTNARLWR----QGQQSDIVVIQHIITKGTIDE 428 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 +++ L K T Q L+ A+K + Sbjct: 429 RIMKALSEKDTTQAALIEAVKADL 452 >gi|313898006|ref|ZP_07831545.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] gi|312957034|gb|EFR38663.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] Length = 447 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 81/197 (41%), Positives = 111/197 (56%), Gaps = 7/197 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + + +L +L I A N+AS T K QLANGA+ Y + E HD K+ ALE II Sbjct: 256 YEELKSDLVLELPDGEITAANAASLTGKLSQLANGAI-YSDTGEIIEFHDRKLDALEDII 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++VAY F DL+R++ K I +WN GKIP+ HPAS GHGL Sbjct: 315 ESANGKPVLVAYWFKHDLSRIK--KRFDVREIKSSKDITDWNAGKIPVAVIHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ L++F L W LE +QQ R+ Q V + ++I + TIDE +L+ Sbjct: 373 NLQAGGSTLIWFGLTWSLELYQQTNARLWRQGQTSG----TVVIEHIITKGTIDERILKA 428 Query: 184 LRTKSTIQDLLLNALKK 200 L K Q+ L++A+K Sbjct: 429 LSKKELTQNALIDAVKA 445 >gi|225871338|ref|YP_002747285.1| SNF2 family phage protein [Streptococcus equi subsp. equi 4047] gi|225700742|emb|CAW95382.1| SNF2 family phage protein [Streptococcus equi subsp. equi 4047] Length = 440 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 10/202 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+ YD++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKDKEISAANSAVLANKLLQMANGAI-YDDDKTTVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E++ PI+V Y + DL RL+K FPQ L + +WN GKIP+L HP S G Sbjct: 306 NVVEESQGQPILVFYQYQHDLERLKKRFPQAEELTS----VDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQ-----QANARLDRQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQL 438 >gi|57234142|ref|YP_181811.1| SNF2 domain-containing protein [Dehalococcoides ethenogenes 195] gi|57224590|gb|AAW39647.1| SNF2 domain protein [Dehalococcoides ethenogenes 195] Length = 448 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 110/200 (55%), Gaps = 7/200 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y ++E L + A N+AS T K QLANGA+ Y + E HD K+ ALE II Sbjct: 256 YEDLKQEFILQLPDGEVTAANAASLTGKLSQLANGAI-YADTGEIIEFHDRKLDALEDII 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++VAY F DL+R++ F I +WN GKIP+ HPAS GHGL Sbjct: 315 EAANEKPLLVAYWFRHDLSRIKNRFNVREIKTSRD--IADWNAGKIPVAVIHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ LV+F L W LE +QQ R+ Q V + ++I + TIDE +++ Sbjct: 373 NLQAGGSTLVWFGLTWSLELYQQTNARLWR----QGQESHTVVIQHIITKGTIDERIMRA 428 Query: 184 LRTKSTIQDLLLNALKKETI 203 L K Q L++A+K E + Sbjct: 429 LTKKELTQSALIDAVKAEVV 448 >gi|139473885|ref|YP_001128601.1| SNF2 family phage protein [Streptococcus pyogenes str. Manfredo] gi|134272132|emb|CAM30377.1| SNF2 family phage protein [Streptococcus pyogenes str. Manfredo] Length = 440 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 85/202 (42%), Positives = 123/202 (60%), Gaps = 10/202 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+ YD++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAI-YDDDKATVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + DL RL+K FPQ L + +WN GKIP+L HP S G Sbjct: 306 NIVEESQGQPILVFYQYQHDLERLKKRFPQAEELTS----VDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQ-----QANARLDRQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQL 438 >gi|167039884|ref|YP_001662869.1| SNF2-related protein [Thermoanaerobacter sp. X514] gi|300915304|ref|ZP_07132618.1| SNF2-related protein [Thermoanaerobacter sp. X561] gi|307724792|ref|YP_003904543.1| SNF2-like protein [Thermoanaerobacter sp. X513] gi|166854124|gb|ABY92533.1| SNF2-related protein [Thermoanaerobacter sp. X514] gi|300888580|gb|EFK83728.1| SNF2-related protein [Thermoanaerobacter sp. X561] gi|307581853|gb|ADN55252.1| SNF2-related protein [Thermoanaerobacter sp. X513] Length = 449 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 86/205 (41%), Positives = 125/205 (60%), Gaps = 8/205 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK +R+L +++GE + A N+A+ + K LQ+ANGAV YD+ +HD K+ ALE Sbjct: 253 MKTLDTMKRDLITNVKGEEVTAANAAALSGKLLQMANGAV-YDDHGTVLYIHDRKLDALE 311 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +IE AN P+++AY F DL+R+QK F D I+ WN+G+IP+ HPAS G Sbjct: 312 DLIEAANGKPVLIAYWFKHDLSRIQKRFEVEVLSTSDS--IKRWNDGEIPIAVIHPASAG 369 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ LV+F L W LE +QQ R+ + G K V +++LI++ TIDE V Sbjct: 370 HGLNLQAGGSTLVWFGLTWSLELYQQTNARLW-----RQGQKETVVIHHLISKGTIDERV 424 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 ++ L K+ Q L++A+K V Sbjct: 425 MKALNDKNNTQSALIDAVKATLKEV 449 >gi|313618477|gb|EFR90480.1| putative protein p41 [Listeria innocua FSL S4-378] Length = 450 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 86/199 (43%), Positives = 122/199 (61%), Gaps = 8/199 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y F+ ++ +L + I+A N+A + K LQ+ANGAVY E K +HD+K+ ALE Sbjct: 254 KVYSDFKEDMVANLGDDEIDAVNAAVLSGKLLQMANGAVYDSENKAHV-IHDKKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F DL R++ FP + I++WN+GKIP+ HPAS GH Sbjct: 313 LIEGANGKPVLVAYWFKHDLERIKNRFP--VRKIQSSKDIEDWNDGKIPIAVIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ L++F L W LE +QQ R+ + G + V V+++I +NTIDE VL Sbjct: 371 GLNLQSGGSTLIWFGLTWSLELYQQTNARL-----YRQGQRDTVIVHHIITKNTIDEDVL 425 Query: 182 QRLRTKSTIQDLLLNALKK 200 L K QD L++A+K Sbjct: 426 LALTKKEKTQDALIDAVKA 444 >gi|298253802|ref|ZP_06977391.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis 5-1] gi|297532138|gb|EFH71111.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis 5-1] Length = 479 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 84/201 (41%), Positives = 123/201 (61%), Gaps = 8/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + ++ L+G+ I+A N+AS + K LQ+A GAV Y+E+K +HD K+ ALE Sbjct: 254 KLYDELKADMVVSLEGKEIDAINAASLSNKLLQMAGGAV-YNEKKESVHIHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F DL R++K F K I +WN G IP+ HPAS GH Sbjct: 313 LIEAANGKPVLVAYWFKHDLERIKKRFN--VREIKTSADIADWNAGMIPVALIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ L++FSL W LE +QQ R+ + G V ++++I +NTIDE V+ Sbjct: 371 GLNLQAGGSTLIWFSLTWSLELYQQTNARL-----NRQGQTSTVVIHHIITKNTIDEDVM 425 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L K+ +QD L+ ++K Sbjct: 426 RALSMKAKVQDALIESVKARL 446 >gi|28895337|ref|NP_801687.1| hypothetical protein SPs0425 [Streptococcus pyogenes SSI-1] gi|28810583|dbj|BAC63520.1| hypothetical protein (phage associated) [Streptococcus pyogenes SSI-1] Length = 442 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 10/202 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+ YD++K +HD+K+ ALE Sbjct: 249 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAI-YDDDKATVAIHDDKLDALE 307 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E++ PI+V Y + DL RL+K FPQ L + +WN GKIP+L HP S G Sbjct: 308 NVVEESQGQPILVFYQYQHDLERLKKRFPQAEELTS----VDKWNSGKIPILLCHPQSAG 363 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G V V++++A+NT+DE V Sbjct: 364 HGLNLQKGGHIIVWFGLTWSLEYYQ-----QANARLDRQGQTEPVIVHHIVAENTVDEKV 418 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 L+ L+ K Q+ LL A+K + Sbjct: 419 LRILQGKEKNQNALLEAVKAQL 440 >gi|300853544|ref|YP_003778528.1| putative phage related DNA helicase [Clostridium ljungdahlii DSM 13528] gi|300433659|gb|ADK13426.1| predicted phage related DNA helicase [Clostridium ljungdahlii DSM 13528] Length = 453 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 83/201 (41%), Positives = 122/201 (60%), Gaps = 8/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y +++L L+GE I+A N+A+ + K Q+ANGAV Y E+K +HD+K+ ALE Sbjct: 254 KAYDGMKQDLVLSLKGEEIDAVNAAALSNKLCQMANGAV-YGEDKRVFTIHDKKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY FN DL R++K F K I+ WN G+I + HPAS GH Sbjct: 313 LIESANGKPVLVAYWFNHDLERIKKRFK--VREIKTSKDIKNWNNGEIEVAVIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ L++F L W LE +QQ R+ + G V ++++I + TIDE ++ Sbjct: 371 GLNLQAGGSTLIWFGLTWSLELYQQTNARLW-----RQGQNETVVIHHIITKGTIDEDIM 425 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + LR K +Q L+ A+K + Sbjct: 426 RALRRKEKVQSDLIAAVKAKL 446 >gi|21910976|ref|NP_665244.1| putative helicase - phage associated [Streptococcus pyogenes MGAS315] gi|28876470|ref|NP_795678.1| putative helicase [Streptococcus pyogenes phage 315.6] gi|50913383|ref|YP_059355.1| Phage-related DNA helicase [Streptococcus pyogenes MGAS10394] gi|21905184|gb|AAM80047.1| putative helicase - phage-associated [Streptococcus pyogenes MGAS315] gi|50902457|gb|AAT86172.1| Phage-related DNA helicase [Streptococcus pyogenes MGAS10394] Length = 440 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 10/202 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+ YD++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAI-YDDDKATVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E++ PI+V Y + DL RL+K FPQ L + +WN GKIP+L HP S G Sbjct: 306 NVVEESQGQPILVFYQYQHDLERLKKRFPQAEELTS----VDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQ-----QANARLDRQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNALLEAVKAQL 438 >gi|42779467|ref|NP_976714.1| phage-associated helicase [Bacillus cereus ATCC 10987] gi|42735383|gb|AAS39322.1| phage-associated helicase [Bacillus cereus ATCC 10987] Length = 453 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 115/198 (58%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F+ E+ + E I+A N+A + K LQ+ANGA+Y D++ +HD K+ ALE + Sbjct: 255 VYDRFREEMVLEFADEEIDAMNAAVLSGKLLQMANGAIYDDDKNTHI-IHDRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY +N DL R++ K I++WN G I + HPAS GHG Sbjct: 314 IEGANGKPVLIAYWYNHDLERIK--AKFNVREIKTSKDIKDWNNGDISVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++F L W LE +QQ R+ + G V ++++I + TIDE V+ Sbjct: 372 LNLQSGGSTLIWFGLTWSLELYQQTNARLW-----RQGQNETVVIHHIITKGTIDEDVMN 426 Query: 183 RLRTKSTIQDLLLNALKK 200 LR K Q L+NA+K Sbjct: 427 ALRRKEKTQSDLINAVKA 444 >gi|220930213|ref|YP_002507122.1| SNF2-related protein [Clostridium cellulolyticum H10] gi|220000541|gb|ACL77142.1| SNF2-related protein [Clostridium cellulolyticum H10] Length = 453 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 80/198 (40%), Positives = 117/198 (59%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y F+ E+ + E I+A N+A + K LQ+ANGA+Y D++K +HD K+ ALE + Sbjct: 255 VYDHFREEMVLEFGDEEIDAMNAAVLSGKLLQMANGAIYDDDKKPHI-IHDRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY +N DL R++ F K I++WN G I + HPAS GHG Sbjct: 314 IEGANGKPVLIAYWYNHDLERIKAKFN--VREIKTSKDIKDWNNGDISVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++F L W LE +QQ R+ + G K V ++++I + TIDE V+ Sbjct: 372 LNLQSGGSTLIWFGLTWSLELYQQTNARLW-----RQGQKETVVIHHIITKGTIDEDVMG 426 Query: 183 RLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 427 ALKRKEKTQTDLINAVKA 444 >gi|297242712|ref|ZP_06926650.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis AMD] gi|296888923|gb|EFH27657.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis AMD] Length = 479 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 83/201 (41%), Positives = 124/201 (61%), Gaps = 8/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + ++++ L+G+ I+A N+A + K LQ+A GAV Y+E+K +HD K+ ALE Sbjct: 254 KLYDELKQDMVVSLEGKEIDAINAAYLSNKLLQMAGGAV-YNEKKESVHIHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F DL R++K F K I +WN G IP+ HPAS GH Sbjct: 313 LIEAANGKPVLVAYWFKHDLERIKKRFN--VREIKTSADIADWNAGMIPVALIHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ L++FSL W LE +QQ R+ + G V ++++I +NTIDE V+ Sbjct: 371 GLNLQAGGSTLIWFSLTWSLELYQQTNARL-----NRQGQTGTVVIHHIITKNTIDEDVM 425 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L K+ +QD L++++K Sbjct: 426 RALSMKAKVQDALIDSVKARL 446 >gi|209559301|ref|YP_002285773.1| Putative helicase-phage associated [Streptococcus phage NZ131.2] gi|209540502|gb|ACI61078.1| Putative helicase-phage associated [Streptococcus phage NZ131.2] Length = 440 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 123/201 (61%), Gaps = 10/201 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y + + +L + + + I A NSA K LQ+ANGA+ YD++K +HD+K+ ALE Sbjct: 247 MKAYKQLEADLVLEFKNKEISAANSAVLANKLLQMANGAI-YDDDKATVAIHDDKLDALE 305 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+E++ PI+V Y + DL RL+K FPQ L + +WN GKIP+L HP S G Sbjct: 306 NIVEESQGQPILVFYQYQHDLERLKKRFPQAEELTS----VDKWNSGKIPILLCHPQSAG 361 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G V V++++A+NT+DE V Sbjct: 362 HGLNLQKGGHIIVWFGLTWSLEYYQ-----QANARLDRQGQTEPVIVHHIVAENTVDEKV 416 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 L+ L+ K Q+ LL A+K + Sbjct: 417 LRILQGKEKNQNDLLEAVKAQ 437 >gi|194432044|ref|ZP_03064333.1| Bbp42 [Shigella dysenteriae 1012] gi|194419573|gb|EDX35653.1| Bbp42 [Shigella dysenteriae 1012] gi|332089212|gb|EGI94319.1| DNA polymerase [Shigella dysenteriae 155-74] Length = 449 Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats. Identities = 111/187 (59%), Positives = 152/187 (81%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 E IEA N+A+KT+KCLQ+A+GAVY D+ W E+HD K++AL+ I+ +A AP++VAYH Sbjct: 262 DEGIEAPNAAAKTLKCLQIASGAVYTDDAGSWSELHDTKLQALDSILTEAAGAPVLVAYH 321 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GHGLN+Q GG ILVFFS Sbjct: 322 WKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGHGLNMQDGGYILVFFS 381 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V+++ +K T+Q++LL+ Sbjct: 382 HWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVMEQRNSKRTVQNILLD 441 Query: 197 ALKKETI 203 A+KK I Sbjct: 442 AMKKRGI 448 >gi|273810587|ref|YP_003344968.1| gp33 [Sodalis phage SO-1] gi|258619872|gb|ACV84125.1| gp33 [Sodalis phage SO-1] Length = 474 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 103/208 (49%), Positives = 139/208 (66%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHDEKI 56 K Y +F+ EL+ +L+ +EA N+ASKT+KCLQLA+GAVY +E W ++HD K+ Sbjct: 263 KIYDQFESELFAELESGTVEAANAASKTIKCLQLASGAVYKVDEDGERTDEWVKIHDAKL 322 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ N AP++VAY + DLARL+K FP G L K ++ WN G+IP++F Sbjct: 323 DALESIVEELNGAPLLVAYQYKHDLARLKKKFPHGVALGKGKQGNKDMEAWNRGEIPIMF 382 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 AHPAS GHGLNLQ GG+ L FS W+ E Q++ERIG RQ QAG R VFVY + A+ Sbjct: 383 AHPASAGHGLNLQDGGHHLAIFSDTWNFEHFSQIVERIGPVRQMQAGHPRPVFVYIIQAR 442 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DELV +R +K IQD L+ +K + Sbjct: 443 GTLDELVAERRDSKRDIQDDLMEYMKAK 470 >gi|134299061|ref|YP_001112557.1| SNF2-like protein [Desulfotomaculum reducens MI-1] gi|134051761|gb|ABO49732.1| SNF2-related protein [Desulfotomaculum reducens MI-1] Length = 454 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 121/201 (60%), Gaps = 7/201 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + +R+L L ++ A +A K LQ+ANGAV YDE +E H K++ALE + Sbjct: 255 QYEQLERDLLLPLADGDVVANTAAVLANKLLQMANGAV-YDENGMAQEFHKAKLEALEGV 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPASCGH 121 IE+A P++V Y + DL R+++ F Q + + K I+ WN+GK+ ++ AHPAS GH Sbjct: 314 IEEAAGKPVLVFYSYRHDLDRIKEHFKQYKPKELKTAEDIKNWNDGKVQIMLAHPASAGH 373 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGNI+ +FS W LE +Q R + G +RAV +++L+A+ TIDE V+ Sbjct: 374 GLNLQAGGNIIAWFSTPWSLELYQ-----QANARLHRQGQQRAVIIHHLVAKGTIDEDVI 428 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L K Q+ LL A+K Sbjct: 429 RVLGYKERGQNALLEAVKARI 449 >gi|225220074|ref|YP_002720041.1| helicase [Enterobacteria phage SSL-2009a] gi|224986015|gb|ACN74579.1| helicase [Enterobacteria phage SSL-2009a] Length = 474 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 102/208 (49%), Positives = 139/208 (66%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHDEKI 56 K Y +F+ EL+ +L+ +EA N+ASKT+KCLQLA+GAVY +E W ++HD K+ Sbjct: 263 KIYDQFEAELFAELESGTVEAANAASKTIKCLQLASGAVYKVDEDGERTDEWVKIHDAKL 322 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ N AP++VAY + DLARL+K FP G + K ++ WN G+IP++F Sbjct: 323 DALESIVEELNGAPLLVAYQYKHDLARLKKKFPHGVAMGKGKQGNKDMEAWNRGEIPIMF 382 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 AHPAS GHGLNLQ GG+ L FS W+ E Q++ERIG RQ QAG R VFVY + A+ Sbjct: 383 AHPASAGHGLNLQDGGHHLAIFSDTWNYEHFAQIVERIGPIRQMQAGHPRPVFVYIIQAR 442 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DELV +R +K IQD L+ +K + Sbjct: 443 GTLDELVAERRDSKRDIQDDLMEYMKAK 470 >gi|154504835|ref|ZP_02041573.1| hypothetical protein RUMGNA_02345 [Ruminococcus gnavus ATCC 29149] gi|153794718|gb|EDN77138.1| hypothetical protein RUMGNA_02345 [Ruminococcus gnavus ATCC 29149] Length = 457 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 122/201 (60%), Gaps = 9/201 (4%) Query: 3 QYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + E+ + +G++I+A N+A+ + K Q+ANGAV YDE + + +HD K+ ALE Sbjct: 251 LYDRMADEMILEYGEGQDIDAVNAAALSNKLQQMANGAV-YDESGNVRNIHDRKLDALED 309 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F D R+ K FP K I++WNEGKIP+ HPAS GH Sbjct: 310 LIESANGKPLLVAYWFKHDRERILKRFPARDINTK--KDIEDWNEGKIPVALIHPASAGH 367 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ +V+FSL W LE +QQ+ R+ + G K V + +L+ + T+DE +L Sbjct: 368 GLNLQEGGSTIVWFSLTWSLELYQQLNARL-----YRQGQKHTVIIEHLVTEGTVDEDIL 422 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + + K Q+ ++ A+K Sbjct: 423 RAIEKKDNTQNAMIEAVKARI 443 >gi|300933380|ref|ZP_07148636.1| phage-associated protein [Corynebacterium resistens DSM 45100] Length = 454 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 90/201 (44%), Positives = 125/201 (62%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + E+ DL G+ I+A N+A+ + K LQLA+GA+ YDEE + VHD K+ ALE Sbjct: 254 KAYERLRDEMVLDLDGQVIDAANAAALSGKLLQLASGAI-YDEEGNTVVVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F D R+ + PQ R L I+ WNEG IPL HPAS GH Sbjct: 313 LVEAANGQPLLVAYWFKHDRQRITERLPQARELT-TSADIEAWNEGGIPLALIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGN+LV+FSL W LE +QQ R+ + G + V + +L + +T+DE VL Sbjct: 372 GLNLQQGGNLLVWFSLTWSLELYQQTNARL-----YRQGQDQPVTITHLASADTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNALKKET 202 L +K+ IQ L++A+ E Sbjct: 427 AALESKNDIQSALIDAVTSEL 447 >gi|304389862|ref|ZP_07371821.1| SNF2 domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327038|gb|EFL94277.1| SNF2 domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 458 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 84/201 (41%), Positives = 118/201 (58%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + +L L E I+A N+A+ + K LQLA+GA+Y + W VHD K+ ALE Sbjct: 254 KVYEQLKADLVLQLGDETIDAANAAALSGKLLQLASGAIYTGD-GDWASVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E N P++VAY F D R+ FPQ R K I+ WN+G+I HPAS GH Sbjct: 313 LVEATNGNPLLVAYWFTHDRERITARFPQAR-ELKTSADIEAWNKGEITFGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG++LV+FSL W LE +QQ R+ + G V + +L+A+ T+DE VL Sbjct: 372 GLNLQAGGHLLVWFSLTWSLELYQQTNARL-----YRQGQSEPVTITHLVAEGTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L K Q L+NA+ +E Sbjct: 427 RALDVKDATQAALINAVAQEI 447 >gi|153955274|ref|YP_001396039.1| Phage-related DNA helicase [Clostridium kluyveri DSM 555] gi|146348132|gb|EDK34668.1| Predicted Phage-related DNA helicase [Clostridium kluyveri DSM 555] Length = 453 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 114/198 (57%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y F+ E+ + E I+A N+A + K LQ+ANGA+Y D++ +HD K+ ALE + Sbjct: 255 VYDHFREEMVFEFADEEIDAMNAAVLSGKLLQMANGAIYDDDKNTHI-IHDRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY +N DL R++ K I++WN G I + HPAS GHG Sbjct: 314 IEGANGKPVLIAYWYNHDLERIK--AKFNVREIKTSKDIKDWNNGDISVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++F L W LE +QQ R+ + G V ++++I + TIDE V+ Sbjct: 372 LNLQSGGSTLIWFGLTWSLELYQQTNARLW-----RQGQNETVVIHHIITKGTIDEDVMN 426 Query: 183 RLRTKSTIQDLLLNALKK 200 LR K Q L+NA+K Sbjct: 427 ALRRKEKTQSDLINAVKA 444 >gi|219855697|ref|YP_002472819.1| hypothetical protein CKR_2354 [Clostridium kluyveri NBRC 12016] gi|219569421|dbj|BAH07405.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 469 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 114/198 (57%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y F+ E+ + E I+A N+A + K LQ+ANGA+Y D++ +HD K+ ALE + Sbjct: 271 VYDHFREEMVFEFADEEIDAMNAAVLSGKLLQMANGAIYDDDKNTHI-IHDRKLDALEDL 329 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY +N DL R++ K I++WN G I + HPAS GHG Sbjct: 330 IEGANGKPVLIAYWYNHDLERIK--AKFNVREIKTSKDIKDWNNGDISVAVIHPASAGHG 387 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++F L W LE +QQ R+ + G V ++++I + TIDE V+ Sbjct: 388 LNLQSGGSTLIWFGLTWSLELYQQTNARLW-----RQGQNETVVIHHIITKGTIDEDVMN 442 Query: 183 RLRTKSTIQDLLLNALKK 200 LR K Q L+NA+K Sbjct: 443 ALRRKEKTQSDLINAVKA 460 >gi|57233543|ref|YP_180823.1| SNF2 family helicase [Dehalococcoides ethenogenes 195] gi|57223991|gb|AAW39048.1| SNF2 family helicase, putative [Dehalococcoides ethenogenes 195] Length = 513 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y + +++L L +I A N+A+ T K QLANGA+ Y ++ +HD K+ ALE Sbjct: 313 QRYDELKQDLVLQLPDGDITAANAAALTGKLCQLANGAI-YTDDGDTFTIHDRKLDALEN 371 Query: 62 IIEKANAAPIIVAYHFNSDLAR---LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IIE A+ PI+VAY F DLAR + + +I++WN G++P+ HPAS Sbjct: 372 IIEAASGKPILVAYWFKHDLARITERLQKLHIPFSKLDSADSIRKWNAGELPVALIHPAS 431 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+ +V+F L W LE +QQ R+ Q V V +++A++TIDE Sbjct: 432 AGHGLNLQSGGSCIVWFGLTWSLELYQQTNARLWR----QGQNAETVVVQHIVAKDTIDE 487 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 +L+ L K + Q L+ A+K + Sbjct: 488 RILKVLSKKDSTQAALIAAVKADL 511 >gi|211731851|gb|ACJ10150.1| DEAD box helicase [Bacteriophage APSE-4] Length = 442 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 104/180 (57%), Positives = 143/180 (79%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE I+ Sbjct: 263 YHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNHNWTAIHDAKIQALESIV 322 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GK+PLLFAHPASCGHGL Sbjct: 323 NESGGTPVLVAYHWKHDLERLLKAFPKGKMLDTNPQTLTNWNSGKVPLLFAHPASCGHGL 382 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V++R Sbjct: 383 NLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVMER 442 >gi|304406781|ref|ZP_07388436.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] gi|304344314|gb|EFM10153.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] Length = 467 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 9/207 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y K +++L ++G I A ++A T K LQL NGA+Y + + E+HD KI+A Sbjct: 265 KLYDKLEKDLLLQVEGTEITATSAAVLTGKLLQLCNGALYDGDRQVH-EIHDNKIEAFME 323 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPAS 118 +IE+ N +V Y + DLAR++ A + ++ P +WN G++ +L AHPAS Sbjct: 324 LIEQLNGKSALVFYSYQHDLARIKSALSKSGLRIRELSTPQDQLDWNAGEVDILLAHPAS 383 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 +GLNLQ GGN +V+F L W LE +Q R + G K+ V +++L+ Q DE Sbjct: 384 AAYGLNLQDGGNHVVWFGLNWSLELYQ-----QANGRLHRQGQKQKVILHHLVVQGGADE 438 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ L K+ +QD LL ALK V Sbjct: 439 DVMAALEGKAAMQDKLLEALKARIERV 465 >gi|300856809|ref|YP_003781793.1| putative phage related DNA helicase [Clostridium ljungdahlii DSM 13528] gi|300436924|gb|ADK16691.1| predicted phage related DNA helicase [Clostridium ljungdahlii DSM 13528] Length = 443 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 85/202 (42%), Positives = 120/202 (59%), Gaps = 9/202 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +++L +L E+I A N+A T K LQ++NGA+ Y E+K ++HDEK+KAL II Sbjct: 240 YKELEKDLVLELGKEDITAANAAVLTNKLLQMSNGAI-YSEDKKVVKIHDEKLKALFEII 298 Query: 64 EKANAAPIIVAYHFNSDLARLQKA---FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 E AN P++V Y F D R+ KD I+ WN+G+IP+L HPAS G Sbjct: 299 EAANGKPVLVFYSFKHDFDRIINFLSSKKLKAVGLKDSADIKRWNKGEIPILLIHPASAG 358 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNI+V+F L W LE +Q R + G K V + ++IA+ T+DE V Sbjct: 359 HGLNLQYGGNIIVWFGLTWSLELYQ-----QANARLHRQGQKETVVINHIIAKGTVDEDV 413 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 ++ L K Q++LL A+K Sbjct: 414 MKSLGNKKVNQNILLEAVKARL 435 >gi|317501093|ref|ZP_07959299.1| SNF2 domain-containing protein [Lachnospiraceae bacterium 8_1_57FAA] gi|316897480|gb|EFV19545.1| SNF2 domain-containing protein [Lachnospiraceae bacterium 8_1_57FAA] Length = 450 Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 81/199 (40%), Positives = 110/199 (55%), Gaps = 7/199 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y ++EL L + A N+AS T K QLANGA+ Y + E HD K+ ALE II Sbjct: 256 YEDLKQELILQLPDGEVTAANAASLTGKLSQLANGAI-YADTGEVIEFHDRKLDALEDII 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++VAY F DL+R++ F I +WN GKIP+ HPAS GHGL Sbjct: 315 EAANEKPLLVAYWFRHDLSRIKNRFNVREIKTSRD--IADWNAGKIPVAVIHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ LV+F L W LE +QQ R+ Q V + ++I + TIDE +++ Sbjct: 373 NLQAGGSTLVWFGLTWSLELYQQTNARLWR----QGQESGTVVIQHIITKGTIDERIVKA 428 Query: 184 LRTKSTIQDLLLNALKKET 202 L K Q L++A+K + Sbjct: 429 LSKKEMTQTALIDAVKADL 447 >gi|218133421|ref|ZP_03462225.1| hypothetical protein BACPEC_01286 [Bacteroides pectinophilus ATCC 43243] gi|217990796|gb|EEC56802.1| hypothetical protein BACPEC_01286 [Bacteroides pectinophilus ATCC 43243] Length = 457 Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 123/201 (61%), Gaps = 9/201 (4%) Query: 3 QYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + E+ + +G++I+A N+A+ + K Q+ANGAV YDE + + +HD K+ ALE Sbjct: 251 LYDRMADEMILEYGEGQDIDAVNAAALSNKLQQMANGAV-YDESGNVRNIHDRKLDALED 309 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F D R+ K FP K I++WNEGKIP+ HPAS GH Sbjct: 310 LIESANGKPLLVAYWFKHDRERILKRFPARDINTK--KDIEDWNEGKIPVALIHPASAGH 367 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ +V+FSL W LE +QQ+ R+ + G K V + +L+ + T+DE +L Sbjct: 368 GLNLQEGGSTIVWFSLTWSLELYQQLNARL-----YRQGQKHTVIIEHLVTEGTVDEDIL 422 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + + K T Q+ ++ A+K Sbjct: 423 RAIEKKDTTQNAMIEAVKARI 443 >gi|211731857|gb|ACJ10155.1| DEAD box helicase [Bacteriophage APSE-3] Length = 440 Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 105/178 (58%), Positives = 144/178 (80%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ ++W E+HD KI+ALE I+ Sbjct: 263 YHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNRNWTEIHDAKIQALESIV 322 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ +WN GKIPLLFAHPASCGHGL Sbjct: 323 NESGGTPVLVAYHWKHDLERLLKAFPKGKNLDANPRTLTDWNNGKIPLLFAHPASCGHGL 382 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 NLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V+ Sbjct: 383 NLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVM 440 >gi|330506407|ref|YP_004382835.1| SNF2 family helicase [Methanosaeta concilii GP-6] gi|328927215|gb|AEB67017.1| SNF2 family helicase [Methanosaeta concilii GP-6] Length = 1035 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 75/213 (35%), Gaps = 21/213 (9%) Query: 3 QYHKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ + K Q+ N + ++ E K+ LE Sbjct: 795 LYAAVVEDMLSRIESSEGMKRRGQILAALTKLKQICNHPALFLQDGSPLEGRSGKLSRLE 854 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWNEG 107 ++++ + ++ F A L+ + + IQ + +G Sbjct: 855 EMLDEAISVGDRALIFTQFAGMGAMLRHQLQEKLGVEVLFLHGKTSRKQREEMIQRFQQG 914 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL N + F WW+ +E R + G K+ VFV Sbjct: 915 SSPIFILSLKAGGFGLNLTA-ANHVFHFDRWWNPA-----VENQATDRAFRIGQKKNVFV 968 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + + T++E + Q + K + + ++ + Sbjct: 969 HKFVCAGTLEERIDQMIEQKKALAESVIGTGEA 1001 >gi|331007741|ref|ZP_08330867.1| hypothetical protein IMCC1989_1942 [gamma proteobacterium IMCC1989] gi|330418449|gb|EGG92989.1| hypothetical protein IMCC1989_1942 [gamma proteobacterium IMCC1989] Length = 479 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 86/188 (45%), Positives = 125/188 (66%), Gaps = 5/188 (2%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 E IE N+A+ + K LQ +NGA+Y +++ HW+ VHD K+ ALE II++A P++VAY+ Sbjct: 276 QETIEVLNAAALSNKLLQFSNGAIYTNDQGHWEAVHDLKLSALEEIIQEAAGQPVLVAYN 335 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + SDLAR+++ FPQ + +I WN GKI LL AHPAS GHGLNLQ+GGN +V+F Sbjct: 336 YKSDLARIKEHFPQAECITDSEDSIDRWNAGKISLLLAHPASAGHGLNLQHGGNTIVWFG 395 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L W LE +QQ R+ + G + V +++L+ +IDE V++ L++K T Q LLN Sbjct: 396 LNWSLELYQQFNARL-----HRQGQTKPVIIHHLVVNGSIDETVIEALKSKKTTQKALLN 450 Query: 197 ALKKETIH 204 ALKK+ + Sbjct: 451 ALKKDITN 458 >gi|239986923|ref|ZP_04707587.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 11379] Length = 914 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 78/218 (35%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++G A Q+ N Y EE K+ L Sbjct: 688 LYEAAVRETMAQIEGAEGIARRGLIMKLLTSLKQICNHPAQYLKEEPTRLTGRSGKLALL 747 Query: 60 EVIIEK--ANAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 + +++ + +++ + S A + G + + + + Sbjct: 748 DELLDTILSEDGSVLIFTQYVSMARLLSAHLASRAIPSQLLHGGTPVPERERMVDRFQSA 807 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V F WW+ +E R + G + V V Sbjct: 808 EVPVFLLSLKAAGTGLNLTRAAH-VVHFDRWWNPA-----VEEQATDRAYRIGQTQPVQV 861 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + +I + T+++ + + L +K + D +L + + + Sbjct: 862 HRIITEGTVEDRIAELLESKRALADAVLGSGESALTEL 899 >gi|239940441|ref|ZP_04692378.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] gi|291443871|ref|ZP_06583261.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] gi|291346818|gb|EFE73722.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] Length = 1006 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 78/218 (35%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++G A Q+ N Y EE K+ L Sbjct: 780 LYEAAVRETMAQIEGAEGIARRGLIMKLLTSLKQICNHPAQYLKEEPTRLTGRSGKLALL 839 Query: 60 EVIIEK--ANAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 + +++ + +++ + S A + G + + + + Sbjct: 840 DELLDTILSEDGSVLIFTQYVSMARLLSAHLASRAIPSQLLHGGTPVPERERMVDRFQSA 899 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V F WW+ +E R + G + V V Sbjct: 900 EVPVFLLSLKAAGTGLNLTRAAH-VVHFDRWWNPA-----VEEQATDRAYRIGQTQPVQV 953 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + +I + T+++ + + L +K + D +L + + + Sbjct: 954 HRIITEGTVEDRIAELLESKRALADAVLGSGESALTEL 991 >gi|302876787|ref|YP_003845420.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|307687468|ref|ZP_07629914.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|302579644|gb|ADL53656.1| SNF2-related protein [Clostridium cellulovorans 743B] Length = 456 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 119/204 (58%), Gaps = 8/204 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +++L L G I A N+AS + K Q+ANGAV Y ++K + E HD+K+ ALE II Sbjct: 258 YEEMKKDLVLSLPGGEITASNAASLSGKLSQMANGAV-YTDDKSYIEFHDKKLDALEDII 316 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPASCG 120 E AN P++VAY + DL R+++ + +I++WN G++P+ HPAS G Sbjct: 317 EAANGQPLMVAYWYKHDLIRIEERLKSLGVQYQRLDSDASIEKWNRGELPVALVHPASAG 376 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ LV+F + W LE +QQ R+ Q V + +LI++ TIDE + Sbjct: 377 HGLNLQSGGSTLVWFGITWSLELYQQTNARLYR----QGQTASCVKIIHLISKGTIDERI 432 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 ++ L K Q L++A+K + Sbjct: 433 VKALSDKDNTQAALIDAVKADLNQ 456 >gi|153814245|ref|ZP_01966913.1| hypothetical protein RUMTOR_00454 [Ruminococcus torques ATCC 27756] gi|145848641|gb|EDK25559.1| hypothetical protein RUMTOR_00454 [Ruminococcus torques ATCC 27756] Length = 457 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 80/201 (39%), Positives = 122/201 (60%), Gaps = 9/201 (4%) Query: 3 QYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + E+ + +G++I+A N+A+ + K Q+ANGAV YDE + + +HD K+ ALE Sbjct: 251 LYDRMADEMILEYGEGQDIDAVNAAALSNKLQQMANGAV-YDESGNVRNIHDRKLDALED 309 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F D R+ K FP K I++WNEGKIP+ HPAS GH Sbjct: 310 LVESANGKPLLVAYWFKHDRERILKRFPARDINTK--KDIEDWNEGKIPVALIHPASAGH 367 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ +V+FSL W LE +QQ+ R+ + G K V + +L+ + T+DE +L Sbjct: 368 GLNLQEGGSTIVWFSLTWSLELYQQLNARL-----YRQGQKHTVIIEHLVTEGTVDEDIL 422 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + + K Q+ ++ A+K Sbjct: 423 RAIEKKDNTQNAMIEAVKARI 443 >gi|257088837|ref|ZP_05583198.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|256997649|gb|EEU84169.1| conserved hypothetical protein [Enterococcus faecalis CH188] Length = 430 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 86/201 (42%), Positives = 125/201 (62%), Gaps = 6/201 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + +RE +L+G ++ A N+A+ + K LQL+NGAV YDE +E+H EK+ ALE Sbjct: 227 KQYKELEREYVLELEGTDVVASNAATLSNKLLQLSNGAV-YDENGDGREIHQEKLNALER 285 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A ++V Y + DL R+Q F Q + L+ I++WNEGKIPLL AHP S GH Sbjct: 286 VIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKIPLLLAHPQSAGH 345 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +Q R + G + V +++L+ + TIDE V+ Sbjct: 346 GLNLQKGGHIIVWFGLTWSLEFYQ-----QANARLDRQGQTQPVIIHHLVTKGTIDEQVI 400 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L+ K Q L+ A+K + Sbjct: 401 KALQAKEQGQSALMAAVKAKI 421 >gi|297585287|ref|YP_003701067.1| SNF2-like protein [Bacillus selenitireducens MLS10] gi|297143744|gb|ADI00502.1| SNF2-related protein [Bacillus selenitireducens MLS10] Length = 460 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 77/201 (38%), Positives = 120/201 (59%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + ++E + ++ A ++A K LQLANGA+ YDE +EVHDEK++AL+ Sbjct: 254 RAYTQLEKEWLLAFEDADVLAGSAAVVANKLLQLANGAI-YDETGDVQEVHDEKLEALKE 312 Query: 62 IIEKANAAPIIVAYHFNSDLARL-QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +IE AN P++V Y++ D R+ + + K I++WN+G +P+L AHPAS G Sbjct: 313 LIESANGKPVLVYYNYQHDRDRILKHLKAFKPRVLKTDQDIRDWNKGNVPVLLAHPASAG 372 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+++V+F L W LE +Q R + G V V++LI + T+DE V Sbjct: 373 HGLNLQAGGHVMVWFGLNWSLELYQ-----QANARLHRQGQTETVVVHHLITKGTMDERV 427 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 + L+ K T Q+ L+ A+K + Sbjct: 428 MAALKQKDTSQEALIAAVKAK 448 >gi|323484110|ref|ZP_08089480.1| SNF2-like protein [Clostridium symbiosum WAL-14163] gi|323402552|gb|EGA94880.1| SNF2-like protein [Clostridium symbiosum WAL-14163] Length = 455 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 122/202 (60%), Gaps = 8/202 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M YH+ ++++ + +I+A N+A + K +Q+ANGAV YDE K +HD K++ALE Sbjct: 251 MNLYHQLEKDMLVPYEDGDIDAVNAAGLSNKLMQMANGAV-YDENGAVKHIHDRKLEALE 309 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E AN P++VAY + DLAR++ G ++WN G+IP+ HPAS G Sbjct: 310 DLVEAANGKPVLVAYWYKHDLARIRDRL--GVAELDAAEDFRKWNAGEIPVAVIHPASAG 367 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ L++F L W LE +QQM R+ + G K V +++LIA++T+DE V Sbjct: 368 HGLNLQTGGSTLIWFGLTWSLELYQQMNARLW-----RQGQKETVVIHHLIAKDTLDERV 422 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L K Q L++A++ Sbjct: 423 MTALEKKDCGQSALVDAVRARI 444 >gi|167746056|ref|ZP_02418183.1| hypothetical protein ANACAC_00751 [Anaerostipes caccae DSM 14662] gi|167654571|gb|EDR98700.1| hypothetical protein ANACAC_00751 [Anaerostipes caccae DSM 14662] Length = 452 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 77/204 (37%), Positives = 120/204 (58%), Gaps = 8/204 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y + EL L I A N+AS + K Q+ANGAV Y +++ VH+ K+ ALE Sbjct: 254 KKYEDMKAELVLALPEGEITAANAASLSNKLSQMANGAV-YADDESILSVHERKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPAS 118 IIE AN P++VAY F DL R+++ + + + +++ WN+G++P+ HPAS Sbjct: 313 IIESANGKPLLVAYWFKHDLMRIEQRLNEKKIPFQKLDTDASMKRWNKGELPVALIHPAS 372 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GG+ LV+F + W LE +QQ + R+ Q R V + +++ Q T+DE Sbjct: 373 AGHGLNLQSGGSTLVWFGITWSLELYQQTVARLYR----QGQESRTVTIIHILTQGTVDE 428 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 +++ L K + Q L++A+K E Sbjct: 429 KIMKALADKDSTQSALIDAVKAEL 452 >gi|281416462|ref|YP_003347382.1| DNA helicase [Enterococcus phage phiFL4A] gi|270209638|gb|ACZ64177.1| DNA helicase [Enterococcus phage phiFL4A] gi|315160593|gb|EFU04610.1| protein, SNF2 family [Enterococcus faecalis TX0645] gi|315579439|gb|EFU91630.1| protein, SNF2 family [Enterococcus faecalis TX0630] Length = 459 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 86/201 (42%), Positives = 125/201 (62%), Gaps = 6/201 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + +RE +L+G ++ A N+A+ + K LQL+NGAV YDE +E+H EK+ ALE Sbjct: 256 KQYKELEREYVLELEGTDVVASNAATLSNKLLQLSNGAV-YDENGDGREIHQEKLNALER 314 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A ++V Y + DL R+Q F Q + L+ I++WNEGKIPLL AHP S GH Sbjct: 315 VIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKIPLLLAHPQSAGH 374 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +Q R + G + V +++L+ + TIDE V+ Sbjct: 375 GLNLQKGGHIIVWFGLTWSLEFYQ-----QANARLDRQGQTQPVIIHHLVTKGTIDEQVI 429 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L+ K Q L+ A+K + Sbjct: 430 KALQAKEQGQSALMAAVKAKI 450 >gi|153938777|ref|YP_001391667.1| SNF2 domain-containing protein [Clostridium botulinum F str. Langeland] gi|152934673|gb|ABS40171.1| SNF2 domain protein [Clostridium botulinum F str. Langeland] gi|295319699|gb|ADG00077.1| SNF2 domain protein [Clostridium botulinum F str. 230613] Length = 454 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 127/204 (62%), Gaps = 9/204 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M +Y + +++L +L ++I A N+A T K LQ++NGA+ Y E+K E+H+EK+KAL Sbjct: 252 MDKYKQLEKDLVIELGEDDITATNAAVLTNKLLQMSNGAI-YSEDKSVLEIHEEKLKALL 310 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---KDPCTIQEWNEGKIPLLFAHPA 117 IIE AN P+++ Y F D R+ + +D I++WN G+IP+L HPA Sbjct: 311 DIIEAANGKPVLIFYSFKHDFDRIVNFLKTKKLNAIGLEDSKDIKKWNNGEIPILLVHPA 370 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GHGLNLQYGGNI+V+F L W LE +Q R + G K +V +++L++++T+D Sbjct: 371 SAGHGLNLQYGGNIIVWFGLTWSLELYQ-----QANARLHRQGQKESVIIHHLVSKDTVD 425 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E V++ L +K Q++LL A+K Sbjct: 426 EDVIKALDSKEVNQNVLLEAVKAR 449 >gi|211731841|gb|ACJ10144.1| DEAD box helicase [Bacteriophage APSE-5] Length = 440 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 103/178 (57%), Positives = 140/178 (78%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE I+ Sbjct: 263 YQAMEKELFLELGDSAIEALNAAAKTIKNLQIASGAIYSDDNHNWTAIHDAKIQALESIV 322 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGHGL Sbjct: 323 NESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGHGL 382 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 NLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V+ Sbjct: 383 NLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVM 440 >gi|300784409|ref|YP_003764700.1| SNF2/RAD54 family helicase [Amycolatopsis mediterranei U32] gi|299793923|gb|ADJ44298.1| SNF2/RAD54 family helicase [Amycolatopsis mediterranei U32] Length = 933 Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 74/212 (34%), Gaps = 21/212 (9%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE +++ + Q+ N + E K+ A Sbjct: 708 LYEAVVRENLAEIRETQGIKRRGQVLQLLNELKQICNHPAQFLKEPHGALTGRSGKLAAF 767 Query: 60 EVIIEK--ANAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPCTIQEWNEG 107 E +++ ++V + D + R+ K + + G Sbjct: 768 EELLDVILDEGESVLVFSQYVQLCRLLERRLKDRGLPTELLSGERSPAKRQDMVDRFQAG 827 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +IP+ + G GLNL ++ + WW+ +E R + G R V V Sbjct: 828 EIPVFLLSLKAGGVGLNLTR-ATHVIHYDRWWNPA-----VEDQATDRAYRIGQDRPVQV 881 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + LIA+ T++E + Q L K + + ++ A + Sbjct: 882 HRLIAEGTLEERIAQVLEKKRGLAESIVGAGE 913 >gi|226949727|ref|YP_002804818.1| SNF2 domain protein [Clostridium botulinum A2 str. Kyoto] gi|226843727|gb|ACO86393.1| SNF2 domain protein [Clostridium botulinum A2 str. Kyoto] Length = 456 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 83/201 (41%), Positives = 125/201 (62%), Gaps = 9/201 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +++L +L ++I A N+A T K LQ++NGA+ Y E+K E+HDEK+KAL II Sbjct: 255 YKQLEKDLVLELGEDDITAANAAVLTNKLLQMSNGAI-YSEDKQVIEIHDEKLKALLDII 313 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---KDPCTIQEWNEGKIPLLFAHPASCG 120 E AN P+++ Y F D R+ F + D I++WN G+IP+L HPAS G Sbjct: 314 ESANGKPVLIFYSFKHDFDRIVNFFKSKKLNAIGLGDSKDIKKWNNGEIPILLVHPASAG 373 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQYGGNI+V+F L W LE +Q R + G K +V +++L++++T+DE V Sbjct: 374 HGLNLQYGGNIIVWFGLTWSLELYQ-----QANARLHRQGQKESVIIHHLVSKDTVDEDV 428 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 ++ L +K Q++LL A+K Sbjct: 429 IKTLGSKEVNQNVLLEAVKAR 449 >gi|284048430|ref|YP_003398769.1| SNF2-related protein [Acidaminococcus fermentans DSM 20731] gi|283952651|gb|ADB47454.1| SNF2-related protein [Acidaminococcus fermentans DSM 20731] Length = 449 Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y F++ L +L G + A N+AS T+K Q+ANGA+ Y ++ +HD K+ ALE Sbjct: 252 KRYQDFKKSLVMELPGGEVTAANAASLTLKLTQMANGAI-YTDDGKTIHLHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F D R+ K +WN GKIP+ HPAS GH Sbjct: 311 LVESANGRPVLVAYWFRHDKERI--CQRMEARELKSSQDFADWNAGKIPVALIHPASAGH 368 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+IL++F L W LE +QQ + R+ Q R V V +++ ++TIDE +L Sbjct: 369 GLNLQQGGSILIWFGLTWSLELYQQTVARLWR----QGQESRTVIVQHIVTKSTIDERIL 424 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L K + Q L+ A+K + Sbjct: 425 KALEKKDSSQAALIEAVKADL 445 >gi|304436366|ref|ZP_07396342.1| SNF2 domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370635|gb|EFM24284.1| SNF2 domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 447 Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 107/201 (53%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y +L ++G+ + A N+ + K Q+ANG V Y ++ +HD K+ ALE Sbjct: 252 KMYDSMCEQLVLQMKGDEVTAANAGVLSGKLAQMANGTV-YTDDGSTLHIHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 IIE N P++V Y F D R++K P I WN G+I + HPAS GH Sbjct: 311 IIESMNGKPLLVPYWFRHDAERIEKRLPC--VRLDTDDAIARWNRGEISVALIHPASAGH 368 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F + W LE +QQ + R+ Q V V ++IA+ TIDE +L Sbjct: 369 GLNLQSGGSTLVWFGITWSLELYQQTVARLYR----QGQNSNTVVVQHIIAEGTIDERIL 424 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L+ K Q L+ A+K E Sbjct: 425 RALKRKDKTQTALIEAVKAEV 445 >gi|318059790|ref|ZP_07978513.1| SNF2-like protein [Streptomyces sp. SA3_actG] gi|318075191|ref|ZP_07982523.1| SNF2-like protein [Streptomyces sp. SA3_actF] Length = 951 Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 83/214 (38%), Gaps = 21/214 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK-EVHDEKIKA 58 + Y + R +++ A + Q+ N + +E + K+ Sbjct: 724 RLYEEQVRATMAEIRSAKGIARSGLVLRLLTGLKQICNHPAQFLKEGEPELSGRSGKLAL 783 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE 106 L+ +++ ++V + + L++ G + + ++ + + Sbjct: 784 LDELLDTILAADGAVLVFTQYVAMARLLERHLRERGIAAQLLHGGTPVPRREEMVRRFQD 843 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + +V + WW+ +E R + G R V Sbjct: 844 GEVPVFLLSLKAAGTGLNLTR-ADHVVHYDRWWNPA-----VEAQATDRAHRIGQTRPVQ 897 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ LIA+ TI++ + + +K + D +L ++ Sbjct: 898 VHRLIAEGTIEDRIAALMESKRELADAVLGGGER 931 >gi|302523347|ref|ZP_07275689.1| SNF2/RAD54 family helicase [Streptomyces sp. SPB78] gi|302432242|gb|EFL04058.1| SNF2/RAD54 family helicase [Streptomyces sp. SPB78] Length = 968 Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 83/214 (38%), Gaps = 21/214 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK-EVHDEKIKA 58 + Y + R +++ A + Q+ N + +E + K+ Sbjct: 741 RLYEEQVRATMAEIRSAKGIARSGLVLRLLTGLKQICNHPAQFLKEGEPELSGRSGKLAL 800 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE 106 L+ +++ ++V + + L++ G + + ++ + + Sbjct: 801 LDELLDTILAADGAVLVFTQYVAMARLLERHLRERGIAAQLLHGGTPVPRREEMVRRFQD 860 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + +V + WW+ +E R + G R V Sbjct: 861 GEVPVFLLSLKAAGTGLNLTR-ADHVVHYDRWWNPA-----VEAQATDRAHRIGQTRPVQ 914 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ LIA+ TI++ + + +K + D +L ++ Sbjct: 915 VHRLIAEGTIEDRIAALMESKRELADAVLGGGER 948 >gi|159146252|gb|ABW90589.1| DEAD box helicase [Bacteriophage APSE-2] gi|159146254|gb|ABW90590.1| DEAD box helicase [Bacteriophage APSE-2] gi|159146256|gb|ABW90591.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 105/177 (59%), Positives = 143/177 (80%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ ++W E+HD KI+ALE I+ Sbjct: 119 YHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNRNWTEIHDAKIQALESIV 178 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ +WN GKIPLLFAHPASCGHGL Sbjct: 179 NESGGTPVLVAYHWKHDLERLLKAFPKGKNLDANPRTLTDWNNGKIPLLFAHPASCGHGL 238 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 NLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 239 NLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|150391738|ref|YP_001321787.1| phage-associated helicase [Alkaliphilus metalliredigens QYMF] gi|149951600|gb|ABR50128.1| phage-associated helicase [Alkaliphilus metalliredigens QYMF] Length = 414 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 86/200 (43%), Positives = 121/200 (60%), Gaps = 8/200 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y F+ ++ L E I+A N+A + K LQ+ANGAV YDE+ +HD K+ ALE + Sbjct: 219 IYSGFRDDMVASLGAEEIDAVNAAVLSGKLLQMANGAV-YDEKNKAHFIHDRKLDALEDL 277 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY F DL R+QK FP + I+EWNEG+IP+ HPAS GHG Sbjct: 278 IEGANGKPVLIAYWFKHDLDRIQKRFPARQLKSSRD--IEEWNEGEIPVAVIHPASAGHG 335 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ LV+F L W LE +QQ R+ + G K V ++++I ++TIDE V+ Sbjct: 336 LNLQSGGSTLVWFGLTWSLELYQQTNARL-----YRQGQKDTVVIHHIITKDTIDEDVMT 390 Query: 183 RLRTKSTIQDLLLNALKKET 202 L K Q L++A+K + Sbjct: 391 ALTKKEKTQASLIDAVKAKL 410 >gi|32475836|ref|NP_868830.1| SWF/SNF family helicase [Rhodopirellula baltica SH 1] gi|32446379|emb|CAD76207.1| probable swi/snf family helicase 2 [Rhodopirellula baltica SH 1] Length = 1386 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 20/210 (9%) Query: 3 QYHKFQRELYCDLQGENIEA---FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ +L+ + + ++ ++ + D + K E+ Sbjct: 1169 MYEAMRRKALQNLEDSDDDRPVHIKILAELMRLRRFCCHPDLVDPDAGLKAAKLERFTDT 1228 Query: 60 EVIIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + + ++V F L + K ++ + +G+ Sbjct: 1229 VTDLIE-GGHKVLVFSQFVGHLHLLRDRLDERKISYQYLDGSTPAKKRKTSVDAFQDGEG 1287 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + ++ WW+ +E R + G +R V VY Sbjct: 1288 DVFLISLKAGGVGLNLTA-ADYVIHMDPWWNPA-----VEDQASDRAHRMGQQRPVTVYR 1341 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I TI+E +LQ +K + D LL + Sbjct: 1342 FITTGTIEERILQLHESKRDLADSLLEGTE 1371 >gi|290962297|ref|YP_003493479.1| hypothetical protein SCAB_79891 [Streptomyces scabiei 87.22] gi|260651823|emb|CBG74949.1| putative helicase (fragment) [Streptomyces scabiei 87.22] Length = 953 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 76/210 (36%), Gaps = 21/210 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ Q+ N Y EE+ K + L Sbjct: 726 LYEALVRETMAEIARADGMERRGLIMKLLTGLKQICNHPAQYLKEERPRVPGRSGKTELL 785 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L++ G + + ++ + G Sbjct: 786 DELLDTILSEGAGVLVFTQYVRMARLLERHLAARGVPTLFLHGGTPVTERESMVERFQAG 845 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V + WW+ +E R + G R V V Sbjct: 846 EVPVFLLSLKAAGTGLNLTR-AEHVVHYDRWWNPA-----VEAQATDRAYRIGQTRPVQV 899 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + LIA+ TI++ + L +K + D +L Sbjct: 900 HRLIAEGTIEDRIADMLLSKRKLADAVLGG 929 >gi|159146260|gb|ABW90593.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 104/179 (58%), Positives = 141/179 (78%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ ++W E+HD KI+ LE Sbjct: 117 EHYQAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNRNWTEIHDAKIQVLES 176 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ +A P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGH Sbjct: 177 IVNEAGGMPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGH 236 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 237 GLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|227520161|ref|ZP_03950210.1| helicase [Enterococcus faecalis TX0104] gi|227072406|gb|EEI10369.1| helicase [Enterococcus faecalis TX0104] gi|315574062|gb|EFU86253.1| protein, SNF2 family [Enterococcus faecalis TX0309B] gi|315582007|gb|EFU94198.1| protein, SNF2 family [Enterococcus faecalis TX0309A] Length = 455 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 124/201 (61%), Gaps = 6/201 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + +RE +L+ ++ A N+A+ + K LQL+NGAV YDE +E+H EK+ ALE Sbjct: 256 KQYKELEREYVLELEETDVVASNAATLSNKLLQLSNGAV-YDENGDGREIHQEKLNALER 314 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A ++V Y + DL R+Q F Q + L+ I++WNEGKIPLL AHP S GH Sbjct: 315 VIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKIPLLLAHPQSAGH 374 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +Q R + G + V +++L+ + TIDE V+ Sbjct: 375 GLNLQKGGHIIVWFGLTWSLEFYQ-----QANARLDRQGQTQPVIIHHLVTKGTIDEQVI 429 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L+ K Q L+ A+K + Sbjct: 430 KALQAKEQGQSALMAAVKAKI 450 >gi|29374969|ref|NP_814122.1| SNF2 domain-containing protein [Enterococcus faecalis V583] gi|29342427|gb|AAO80193.1| SNF2 domain protein [Enterococcus faecalis V583] Length = 457 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 124/201 (61%), Gaps = 6/201 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + +RE +L+G ++ A N+A+ + K LQL+NGAV YDE +E+H EK+ ALE Sbjct: 254 KQYKELEREYVLELEGTDVVASNAATLSNKLLQLSNGAV-YDENGDGREIHQEKLNALER 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE A ++V Y + DL R+Q F Q + L+ I++WNEGKI LL AHP S GH Sbjct: 313 VIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKISLLLAHPQSAGH 372 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +Q R + G + V +++L+ + TIDE V+ Sbjct: 373 GLNLQKGGHIIVWFGLTWSLEFYQ-----QANARLDRQGQTQPVIIHHLVTKGTIDEQVI 427 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L+ K Q L+ A+K + Sbjct: 428 KALQAKEQGQSALMAAVKAKI 448 >gi|217965845|ref|YP_002351523.1| SNF2 domain protein [Listeria monocytogenes HCC23] gi|217335115|gb|ACK40909.1| SNF2 domain protein [Listeria monocytogenes HCC23] gi|307569607|emb|CAR82786.1| SNF2/RAD54 helicase family protein [Listeria monocytogenes L99] Length = 463 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 125/204 (61%), Gaps = 7/204 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + ++E + + ++ A ++A + K LQLANGA+ YDE + ++E+H++K++AL I Sbjct: 259 QYSELEKEFLLEFEHSDVVADSAAVLSNKLLQLANGAI-YDENQEYQEIHNKKLEALADI 317 Query: 63 IEKANAAPIIVAYHFNSDLARLQKA-FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 IE++ P++V Y + D R+ KD +I++WN GK +L AHPAS GH Sbjct: 318 IEESVGQPVLVFYSYKHDEKRILNHLKQYKPEKIKDSRSIRKWNAGKTRVLLAHPASAGH 377 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+I+V+F L W LE +Q R + G K++V V++++A++T+DE V+ Sbjct: 378 GLNLQDGGHIVVWFGLTWSLELYQ-----QANARLFRQGQKKSVIVHHIVAKDTLDEKVI 432 Query: 182 QRLRTKSTIQDLLLNALKKETIHV 205 + L +K QD LL A+K V Sbjct: 433 EALSSKKVGQDALLEAVKARLEKV 456 >gi|197303505|ref|ZP_03168544.1| hypothetical protein RUMLAC_02227 [Ruminococcus lactaris ATCC 29176] gi|197297503|gb|EDY32064.1| hypothetical protein RUMLAC_02227 [Ruminococcus lactaris ATCC 29176] Length = 333 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 79/205 (38%), Positives = 120/205 (58%), Gaps = 8/205 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + E++ L+ I A N+A+ + K LQ+ANGAV Y ++ ++HD+K+ ALE + Sbjct: 132 LYDDMEAEMFLPLRTGEITAANAAALSGKLLQMANGAV-YSDDGDEIQIHDQKLDALEDL 190 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPASC 119 IE AN P++VAY F DL R+++ + + + +I++WN G++P+ HPAS Sbjct: 191 IEAANGKPVMVAYWFKHDLTRIRRRLSERKISFEKLDSEESIRKWNRGELPVALIHPASA 250 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGNIL++F L W LE +QQ + R+ Q V V ++I TIDE Sbjct: 251 GHGLNLQSGGNILIWFGLTWSLELYQQTVARLWR----QGQSAETVVVQHIITAGTIDED 306 Query: 180 VLQRLRTKSTIQDLLLNALKKETIH 204 V++ L K Q+ L+ A+K H Sbjct: 307 VMKALANKDMTQNRLIAAVKARVTH 331 >gi|294628099|ref|ZP_06706659.1| SNF2/helicase domain-containing protein [Streptomyces sp. e14] gi|292831432|gb|EFF89781.1| SNF2/helicase domain-containing protein [Streptomyces sp. e14] Length = 906 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 78/218 (35%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ G A Q+ N + E++ K++ L Sbjct: 679 LYEALVRETLAEISGAGGMARRGLVVKLLTGLKQICNHPAQFLKEDRPRIAGRSGKLELL 738 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + ++ A ++V + +++ G + ++ + +G Sbjct: 739 DELLGTILAEGAGVLVFTQYVRMARLIERHLAARGVPSQFLHGGTPVAGREDMVRRFQDG 798 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GLNL +V + WW+ +E R + G R V V Sbjct: 799 EAPVFLLSLKAAGTGLNLTR-AEHVVHYDRWWNPA-----VEAQATDRAYRIGQSRPVQV 852 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ T+++ + LR K + + +L + + Sbjct: 853 HRLIAEGTVEDRIAGLLRRKQDLAETVLGTGEAALTEL 890 >gi|320006862|gb|ADW01712.1| SNF2-related protein [Streptomyces flavogriseus ATCC 33331] Length = 992 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 78/218 (35%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N Y EE+ K++ L Sbjct: 765 LYEAVVRETLDEISGADGFARRGLIVKLMTALKQICNHPAQYLKEEQPRIADRSGKVELL 824 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L++ G + + + + G Sbjct: 825 DELLDTILSEGAGVLVFTQYVQMARLLERHLAARGVPTQFLHGGTPIAEREAMVDRFQAG 884 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V WW+ +E R + G R V V Sbjct: 885 RVPVFLLSLKAAGTGLNLTR-AEHVVHVDRWWNPA-----VEAQATDRAYRIGQTRPVQV 938 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LI + TI++ + L K + D +L + + Sbjct: 939 HRLITEGTIEDRIAAMLARKQGLADAVLGGGEAALTEL 976 >gi|255306562|ref|ZP_05350733.1| SNF2-related protein [Clostridium difficile ATCC 43255] Length = 456 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 120/202 (59%), Gaps = 7/202 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y + ++E +L + I A ++A K LQLANGA+Y ++ K+ KE+H EK++AL+ Sbjct: 255 LKYYKELEKEKILELDKDIITASSAAVAANKLLQLANGAIYDND-KNVKELHREKLEALK 313 Query: 61 VIIEKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II+ +N PII+ Y++ D R +++ ++ I +WN G+I LL HPAS Sbjct: 314 EIIDVSNGKPIIIFYNYKHDYNRLMKEFKSLKPRTIENSKDIYDWNNGRIQLLLCHPAST 373 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+I+V+F L W LE +Q R + G + V +++LI + TIDE Sbjct: 374 GHGLNLQSGGSIIVWFGLTWSLELYQ-----QANARLYRQGQRETVIIHHLICKGTIDEQ 428 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V++ L K Q LL A+K + Sbjct: 429 VMEALENKDKGQSALLEAVKAK 450 >gi|320011393|gb|ADW06243.1| SNF2-related protein [Streptomyces flavogriseus ATCC 33331] Length = 964 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 80/218 (36%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ A Q+ N Y EE K+ L Sbjct: 738 LYEAAVRETMAFIEQSEGIARRGLIMKLLGSLKQICNHPAQYLKEEPTRLTGRSGKLALL 797 Query: 60 EVIIEK--ANAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 + +++ + +++ + S + + G + + + + G Sbjct: 798 DELLDTILSEDGSVLIFTQYVSMARLLSAHLASRSIPSQLLHGGTPVPERERMVDGFQSG 857 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + ++ + WW+ +E R + G + V V Sbjct: 858 EVPVFLLSLKAAGTGLNLTRAAH-VIHYDRWWNPA-----VEEQATDRAYRIGQTQPVQV 911 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ T+++ + + L++K + D +L + + + Sbjct: 912 HRLIAEGTVEDRISELLQSKRALADAVLGSGEAALTEL 949 >gi|85860994|ref|YP_463196.1| swf/snf family helicase [Syntrophus aciditrophicus SB] gi|85724085|gb|ABC79028.1| swf/snf family helicase [Syntrophus aciditrophicus SB] Length = 1407 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 79/211 (37%), Gaps = 25/211 (11%) Query: 3 QYHKFQRELYCDLQGEN----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y +R+ L+ + + ++ ++ Q + E+ K+ Sbjct: 1187 LYEAMRRQAVETLEQNDSPVGQKHLKILAEIMRLRQACCHPRLVVPD---SELTSSKLAL 1243 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNE 106 ++E+ N+ +V F S LA + G + ++ + Sbjct: 1244 FGEVVEEMLENSHKALVFSQFVSHLALIQDYLKQKGIEYRYLDGGTPPKERRREVEAFQA 1303 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK L + G GLNL + ++ WW+ +E R + G KR V Sbjct: 1304 GKGSLFLISLRAGGVGLNLTA-ADFVIHMDPWWNPA-----VEDQASDRAHRIGQKRPVT 1357 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+ +NTI+E +L+ +K + D LL+ Sbjct: 1358 VYRLVTKNTIEEKILKLHASKRDLADSLLDG 1388 >gi|227498325|ref|ZP_03928475.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226903787|gb|EEH89705.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 457 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 117/198 (59%), Gaps = 7/198 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + ++ L +L G + A N+AS T+K Q+ANGA+ Y ++K +HD K+ ALE ++ Sbjct: 254 YDELKKYLVLELPGGEVTAANAASLTLKLSQMANGAI-YTDDKDVVTIHDRKLDALEDLV 312 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN P++VAY F D R++ K+ +WNEGKIP+ HPAS GHGL Sbjct: 313 ESANGKPVLVAYWFKHDKDRIR--KRMEARELKESQDFADWNEGKIPVALIHPASAGHGL 370 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ILV+F L W +E +QQ R+ Q + V + +++A++TIDE +L+ Sbjct: 371 NLQQGGSILVWFGLTWSMELYQQTNARLWR----QGQTDKTVIIQHIVAKSTIDERILKV 426 Query: 184 LRTKSTIQDLLLNALKKE 201 L K Q L+ A+K + Sbjct: 427 LEHKDGTQSALIEAVKAD 444 >gi|295835221|ref|ZP_06822154.1| SNF2/helicase domain-containing protein [Streptomyces sp. SPB74] gi|295825374|gb|EDY45121.2| SNF2/helicase domain-containing protein [Streptomyces sp. SPB74] Length = 923 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 84/215 (39%), Gaps = 23/215 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYY---DEEKHWKEVHDEKIK 57 Y + R +++ + A + Q+ N ++ E + + K+ Sbjct: 695 LYEEQVRGTLAEIRSASGIARSGLVLRLLTGLKQICNHPAHFLKEPEPEPGRPGRSGKLA 754 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN 105 L+ ++ ++V + + L++ G + + ++ + Sbjct: 755 LLDELLGTILAADGAVLVFTQYVAMARLLERHLRERGVAAQLLHGGTPVPRREEMVRRFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G++P+ + G GLNL + +V + WW+ +E R + G R V Sbjct: 815 DGEVPVFLLSLKAAGTGLNLTR-ADHVVHYDRWWNPA-----VEAQATDRAHRIGQTRPV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ LIA+ TI++ + + +K + D +L + ++ Sbjct: 869 QVHRLIAEGTIEDRIAALMESKRELADAVLGSGER 903 >gi|317132765|ref|YP_004092079.1| SNF2-related protein [Ethanoligenens harbinense YUAN-3] gi|315470744|gb|ADU27348.1| SNF2-related protein [Ethanoligenens harbinense YUAN-3] Length = 450 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 7/199 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y + + +L +L G+ I A N+A+ T K QLANGA+ Y ++ E HD K+ ALE Sbjct: 256 KRYEELKNDLVLELHGDEITAANAATLTGKLSQLANGAI-YSDDGKIIEFHDRKLDALED 314 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 IIE AN P++VAY F DL R++ K I +WN G IP+ HPAS GH Sbjct: 315 IIEAANGKPLLVAYWFRHDLERIR--RRFDVREIKSSQDIDDWNAGNIPVAVIHPASAGH 372 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F L W LE +QQ R+ Q R V + +++ +TID +L Sbjct: 373 GLNLQSGGSTLVWFGLTWSLELYQQTNARLWR----QGQKSRTVVIQHIVTASTIDGQIL 428 Query: 182 QRLRTKSTIQDLLLNALKK 200 L+ K Q L+ A+K Sbjct: 429 NALKHKDKTQSALIAAVKA 447 >gi|220930418|ref|YP_002507327.1| SNF2-related protein [Clostridium cellulolyticum H10] gi|220000746|gb|ACL77347.1| SNF2-related protein [Clostridium cellulolyticum H10] Length = 457 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 88/205 (42%), Positives = 125/205 (60%), Gaps = 9/205 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y K +R+L L +I A +A + K LQ ANGAV Y+E + +++H+ K+ ALE I+ Sbjct: 256 YRKLERDLLLPLVDGDIVANTAAVLSNKLLQFANGAV-YNENQEIQKIHNAKLDALEDIL 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLFAHPASCG 120 E AN P+++ Y + DL+R+Q+ F Q RTL K P I +WN GKI LL HP S G Sbjct: 315 EAANGHPVLLFYSYKHDLSRIQERFTQTRTLRKGPEGSKDIADWNSGKIQLLAVHPGSAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G K++V +++L+A TIDE V Sbjct: 375 HGLNLQDGGSIIVWFGLTWSLELYQ-----QANARLHRQGQKQSVIIHHLVADGTIDEDV 429 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 ++ L K+T QD L+ A+K V Sbjct: 430 MRALEDKATGQDALMEAVKARIERV 454 >gi|328881666|emb|CCA54905.1| Helicase, SNF2 or RAD54 family [Streptomyces venezuelae ATCC 10712] Length = 948 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 79/224 (35%), Gaps = 27/224 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYDEEKHWKE-------VHD 53 Y RE ++ A Q+ N Y +E + Sbjct: 716 LYEAVVRETMAQIEEAEGMARRGLVMKLLTSLKQICNHPAQYLKEAAPRGSGTARLAGRS 775 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDPCTI 101 K+ L+ +++ ++V + S + G + + + Sbjct: 776 GKLALLDELLDTILAEDGSVLVFTQYVSMARLLADHLAARGIQAQLLHGGTPVAERERMV 835 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G++P+ + G GLNL G+ +V + WW+ +E R + G Sbjct: 836 DRFQAGEVPVFLLSLKAAGTGLNLTRAGH-VVHYDRWWNPA-----VEEQATDRAYRIGQ 889 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V V+ L+A+ T+++ + + LR K + D +L + + + Sbjct: 890 TQPVQVHRLVAEGTVEDRIAEMLRAKRALADAVLGSGEAALTEL 933 >gi|313896513|ref|ZP_07830064.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974937|gb|EFR40401.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 447 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 109/202 (53%), Gaps = 7/202 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +L ++G+ + A N+ + K Q+ANGAV Y ++ +HD K+ ALE Sbjct: 252 KIYTEMCDQLVLQMKGDEVTAANAGVLSGKLAQMANGAV-YTDDGTTLHIHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +E N P++VAY F D R++K I WN G+I + HPAS GH Sbjct: 311 FVESMNGKPLLVAYWFRHDAERIEKRVTC--VRLDTDDAIARWNRGEISVALIHPASAGH 368 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F + W LE +QQ + R+ Q + V V ++IA+ TIDE +L Sbjct: 369 GLNLQSGGSTLVWFGITWSLELYQQTVARLYR----QGQTAKTVVVQHIIAEGTIDERIL 424 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 + L+ K Q L+ A+K E Sbjct: 425 RALKRKDKTQAALIEAVKAEVT 446 >gi|302548243|ref|ZP_07300585.1| SNF2/helicase domain protein [Streptomyces hygroscopicus ATCC 53653] gi|302465861|gb|EFL28954.1| SNF2/helicase domain protein [Streptomyces himastatinicus ATCC 53653] Length = 554 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 82/218 (37%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE+ ++ G + A Q+ N + E++ K++ L Sbjct: 327 LYEAVVREILAEIAGADGLARRGLIVKLLTGLKQICNHPAQFLKEDRPVVPGRSGKLELL 386 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ A ++V + L+ G + + ++ + +G Sbjct: 387 DELLDTILAEGASVLVFTQYVQMARILEAHLTARGVPLQLLHGGTPVARREEMVRRFQDG 446 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GLNL G+ +V + WW+ +E R + G + V V Sbjct: 447 EAPVFLLSLKAAGTGLNLTRAGH-VVHYDRWWNPA-----VEAQATDRAYRIGQTQPVQV 500 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LI + T+++ + L K + D +L + + + Sbjct: 501 HRLITEGTVEDRIAAMLERKRELADAVLGSGEAALTEL 538 >gi|159146262|gb|ABW90594.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 103/177 (58%), Positives = 139/177 (78%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE I+ Sbjct: 119 YQAMEKELFLELGDSAIEALNAAAKTIKNLQIASGAIYSDDNHNWTAIHDAKIQALESIV 178 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGHGL Sbjct: 179 NESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGHGL 238 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 NLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 239 NLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|282865750|ref|ZP_06274800.1| SNF2-related protein [Streptomyces sp. ACTE] gi|282559394|gb|EFB64946.1| SNF2-related protein [Streptomyces sp. ACTE] Length = 957 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N Y EE+ K++ L Sbjct: 730 LYEAVVRETMAEISGADGFARRGLVVKLLTALKQICNHPAQYLKEEEPRIADRSGKVELL 789 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ A ++V + L++ G + + + + G Sbjct: 790 DELLDTILAEGASVLVFTQYVRMGRLLEQHLAVRGVRTQFLHGGTPVAEREAMVNRFQAG 849 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL G+ +V F WW+ +E R + G + V V Sbjct: 850 DAPVFLLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEAQATDRAYRIGQTQPVQV 903 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ TI++ + L K + D +L + + Sbjct: 904 HRLIAEGTIEDRIAGMLARKQGLADAVLGGGESALTEL 941 >gi|302549833|ref|ZP_07302175.1| SNF2/RAD54 family helicase [Streptomyces viridochromogenes DSM 40736] gi|302467451|gb|EFL30544.1| SNF2/RAD54 family helicase [Streptomyces viridochromogenes DSM 40736] Length = 948 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 81/220 (36%), Gaps = 25/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ G A Q+ N Y EE+ K++ L Sbjct: 721 LYEAVVREALAEISGAGSMARRGLIVKLLTGLKQICNHPAQYLKEERPVIAGRSGKLELL 780 Query: 60 E----VIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN 105 + I+ + ++V + L++ G + + ++ + Sbjct: 781 DELLDTILAERAG--VLVFTQYVRMARLLERHLAGRGTPSQFLHGGTPVAEREAMVRRFQ 838 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G++P+ + G GLNL +V + WW+ +E R + G R V Sbjct: 839 DGEVPVFLLSLKAAGTGLNLTR-AEHVVHYDRWWNPA-----VEAQATDRAYRIGQTRPV 892 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ ++A+ TI++ + + L K + D +L + + + Sbjct: 893 QVHRIVAEGTIEDRIAELLTRKRALADAVLGSGEAALTEL 932 >gi|325684273|gb|EGD26446.1| SNF2 domain protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 633 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 120/203 (59%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ I A N+A + QLA+GA+Y ++ +H++E+ DEKI+ Sbjct: 434 KSYQQLKKDQVLDLPGQEISAENAAVLAGRLRQLASGAIYEEDGEHYQEIFDEKIECC-F 492 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----DPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL + + + P I+ WN+GKIP++ PA Sbjct: 493 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDGSPGMIRRWNKGKIPVMLVQPA 552 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ + G K+ V +++L+ + TID Sbjct: 553 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL-----YRQGQKKPVIIHHLLTKGTID 607 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 608 RHVLDSLKKKDLSQQALLAAVRR 630 >gi|297155115|gb|ADI04827.1| SNF2/RAD54 family helicase [Streptomyces bingchenggensis BCW-1] Length = 1008 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 83/218 (38%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE+ ++ G + A Q+ N Y E++ K++ L Sbjct: 781 LYEAVVREMLAEISGADGLARRGLIVKLLTGLKQICNHPAQYLKEDRPVIAGRSGKLELL 840 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ A ++V + LQ G + + + + EG Sbjct: 841 DELLDTILAEDASVLVFTQYVQMARILQDHLAARGIGAQLLHGGTPVARRQELVDRFQEG 900 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL G+ +V + WW+ +E R + G + V V Sbjct: 901 EVPVFLLSLKAAGTGLNLTRAGH-VVHYDRWWNPA-----VEAQATDRAYRIGQTQPVQV 954 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ T+++ + L K + D +L A + + Sbjct: 955 HRLIAEGTVEDRIAAILERKRELADAVLGAGEAALTEL 992 >gi|326779993|ref|ZP_08239258.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326660326|gb|EGE45172.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 1001 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ A Q+ N Y EE K+ L Sbjct: 775 LYEAAVRETMAQIEAAEGIARRGLVMKLLTSLKQICNHPAQYLKEEPTRLTGRSGKLALL 834 Query: 60 EVIIEK--ANAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 + +++ + +++ + + A + G + + + + Sbjct: 835 DELLDTILSEDGSVLIFTQYVTMAKLLSAHLASRAIPSQLLHGGTPVAERERMVDRFQSA 894 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V F WW+ +E R + G + V V Sbjct: 895 EVPVFLLSLKAAGTGLNLTRAAH-VVHFDRWWNPA-----VEEQATDRAYRIGQTQPVQV 948 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + +IA+ T+++ + + L +K + D +L + + + Sbjct: 949 HRIIAEGTVEDRIAELLESKRVLADAVLGSGESALTEL 986 >gi|182439336|ref|YP_001827055.1| SNF2/RAD54 family helicase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467852|dbj|BAG22372.1| putative SNF2/RAD54 family helicase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 1004 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ A Q+ N Y EE K+ L Sbjct: 778 LYEAAVRETMAQIEAAEGIARRGLVMKLLTSLKQICNHPAQYLKEEPTRLTGRSGKLALL 837 Query: 60 EVIIEK--ANAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 + +++ + +++ + + A + G + + + + Sbjct: 838 DELLDTILSEDGSVLIFTQYVTMAKLLSAHLASRAIPSQLLHGGTPVAERERMVDRFQSA 897 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V F WW+ +E R + G + V V Sbjct: 898 EVPVFLLSLKAAGTGLNLTRAAH-VVHFDRWWNPA-----VEEQATDRAYRIGQTQPVQV 951 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + +IA+ T+++ + + L +K + D +L + + + Sbjct: 952 HRIIAEGTVEDRIAELLESKRVLADAVLGSGESALTEL 989 >gi|291441044|ref|ZP_06580434.1| SNF2/RAD54 family helicase [Streptomyces ghanaensis ATCC 14672] gi|291343939|gb|EFE70895.1| SNF2/RAD54 family helicase [Streptomyces ghanaensis ATCC 14672] Length = 619 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 82/218 (37%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N + EE+ K++ L Sbjct: 392 LYEAVVREALAEISGADGAARRGLIVKLLTGLKQICNHPAQFLKEERPVVAGRSGKLELL 451 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEG 107 + +++ A ++V + ++ G + + ++ + +G Sbjct: 452 DELLDTVLAERAGVLVFTQYVQMARLLQRHLAARGVPEQFLHGGTPVAEREAMVRRFQDG 511 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V + WW+ +E R + G R V V Sbjct: 512 EVPVFLLSLKAAGTGLNLTR-AEHVVHYDRWWNPA-----VEAQATDRAYRIGQTRPVQV 565 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + +IA+ T+++ + + L K + D +L + + + Sbjct: 566 HRIIAEGTVEDRIAELLVRKRELADAVLGSGEAALTEL 603 >gi|326774662|ref|ZP_08233927.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326654995|gb|EGE39841.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 1039 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 78/218 (35%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ Q+ N Y EE+ K++ L Sbjct: 812 LYEAVVRETLAEISAADGFERRGLVMKLLTALKQICNHPAQYLKEEQPRIADRSGKVELL 871 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ ++V + L++ G + + + + G Sbjct: 872 DELLDTILAERGSVLVFTQYVQMARLLEEHLAARGVATQFLHGGTPVARREEMVNRFQSG 931 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GLNL G+ +V F WW+ +E R + G + V V Sbjct: 932 EAPVFLLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEAQATDRAYRIGQTQPVQV 985 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ TI++ + + L K + D +L + + + Sbjct: 986 HRLIAEGTIEDRIAEMLTRKQGLADAVLGSGEAALTEL 1023 >gi|239932688|ref|ZP_04689641.1| helicase [Streptomyces ghanaensis ATCC 14672] Length = 624 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 82/218 (37%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N + EE+ K++ L Sbjct: 397 LYEAVVREALAEISGADGAARRGLIVKLLTGLKQICNHPAQFLKEERPVVAGRSGKLELL 456 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEG 107 + +++ A ++V + ++ G + + ++ + +G Sbjct: 457 DELLDTVLAERAGVLVFTQYVQMARLLQRHLAARGVPEQFLHGGTPVAEREAMVRRFQDG 516 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V + WW+ +E R + G R V V Sbjct: 517 EVPVFLLSLKAAGTGLNLTR-AEHVVHYDRWWNPA-----VEAQATDRAYRIGQTRPVQV 570 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + +IA+ T+++ + + L K + D +L + + + Sbjct: 571 HRIIAEGTVEDRIAELLVRKRELADAVLGSGEAALTEL 608 >gi|182434140|ref|YP_001821859.1| SNF2/RAD54 family helicase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462656|dbj|BAG17176.1| putative SNF2/RAD54 family helicase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 1006 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ Q+ N Y EE K++ L Sbjct: 779 LYEAVVRETLAEISAADGFERRGLVMKLLTALKQICNHPAQYLKEEDPRIADRSGKVELL 838 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ ++V + L++ G + + + + G Sbjct: 839 DELLDTILAEQGSVLVFTQYVQMARLLEEHLAARGVATQFLHGGTPVARREEMVNRFQSG 898 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GLNL G+ +V F WW+ +E R + G + V V Sbjct: 899 EAPVFLLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEAQATDRAYRIGQTQPVQV 952 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ TI++ + + L K + D +L + + + Sbjct: 953 HRLIAEGTIEDRIAEMLTRKQGLADAVLGSGEAALTEL 990 >gi|300786586|ref|YP_003766877.1| SNF2/RAD54 family helicase [Amycolatopsis mediterranei U32] gi|299796100|gb|ADJ46475.1| SNF2/RAD54 family helicase [Amycolatopsis mediterranei U32] Length = 838 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 79/221 (35%), Gaps = 22/221 (9%) Query: 1 MKQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKI 56 + Y RE+ ++ Q+ N Y + + E K+ Sbjct: 609 VALYEAVVREMMAEIAASDGMARRGRIVKLLTALKQICNHPAQYLKARSLDEGGGRSGKV 668 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 + L+ +++ ++V + + L+K G + + + + Sbjct: 669 ELLDELLDTILAEDGAVLVFTQYVAMARLLEKHLAGRGIATQLLHGGTPVPRREELVARF 728 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G +P+ + G GLNL + +V F WW+ +E R + G R Sbjct: 729 QAGAVPVFLLSLKAAGTGLNLTR-ADHVVHFDRWWNPA-----VEDQATDRAYRIGQTRP 782 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V+ L+A+ T+++ + LR K + + +L + + Sbjct: 783 VQVHRLVAEGTVEDRIAAMLREKRALAEAVLAGGEAALTEL 823 >gi|291556509|emb|CBL33626.1| Superfamily II DNA/RNA helicases, SNF2 family [Eubacterium siraeum V10Sc8a] Length = 454 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 110/201 (54%), Gaps = 8/201 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +++ DL I A N+A + K Q+ANGA+ YD+ + +H++K+ ALE I Sbjct: 255 AYDEMKKQFILDLPEGEISAANAAVLSGKLSQMANGAI-YDDAGNAVSIHEQKLDALEDI 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQ---KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IE AN P++VAY + DL R+ + +I+ WN G+I + HPAS Sbjct: 314 IESANGKPLLVAYWYQHDLERIMERLHERHIPFSKLDKADSIRRWNNGEISVALIHPASA 373 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GGN +V+F L W LE + Q I R+ Q + V V +++ TIDE Sbjct: 374 GHGLNLQAGGNTIVWFGLTWSLELYSQTIARLWR----QGQTEETVIVQHIVTDGTIDEQ 429 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 +L+ L+ K Q L+ A+K Sbjct: 430 ILRALKAKDKTQSALIAAVKA 450 >gi|281357099|ref|ZP_06243589.1| SNF2-related protein [Victivallis vadensis ATCC BAA-548] gi|281316657|gb|EFB00681.1| SNF2-related protein [Victivallis vadensis ATCC BAA-548] Length = 1041 Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 77/209 (36%), Gaps = 22/209 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEA---FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y K ++E L + +A + ++ Q+ + + K Sbjct: 821 LYEKVRKEGLAQLAKYKEGDARGNATVFTTLLRLRQICCHPALLPD-GKGDGIPSAKTDL 879 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEG 107 L ++ + + +++ F S LA + G T ++ N Sbjct: 880 LFELLHENIDSNHKMLLFSQFTSLLALTVKELNAEGIPFEYLDGSTRNRQERVDHFNNSP 939 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +IPL + G GLNL + ++ + WW+ +E R + G RAV Sbjct: 940 EIPLFLLSLKAGGTGLNLTS-ADTVIIYDPWWNPA-----VELQAADRTHRIGQTRAVSS 993 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+ +++I+E +L+ K I D +++ Sbjct: 994 VKLVVKDSIEEKILELQERKREIFDSVID 1022 >gi|159146258|gb|ABW90592.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 141 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 103/177 (58%), Positives = 140/177 (79%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE I+ Sbjct: 119 YHAMEKELFLELGESAIEALNAAAKTIKILQIASGAIYSDDNHNWTAIHDAKIQALESIV 178 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GK+PLLFAHPASCGHGL Sbjct: 179 NESGGTPVLVAYHWKHDLERLLKAFPKGKMLDTNPQTLTNWNSGKVPLLFAHPASCGHGL 238 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 NLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 239 NLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|282862053|ref|ZP_06271116.1| SNF2-related protein [Streptomyces sp. ACTE] gi|282563078|gb|EFB68617.1| SNF2-related protein [Streptomyces sp. ACTE] Length = 979 Score = 141 bits (354), Expect = 8e-32, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 78/218 (35%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ A Q+ N Y EE K+ L Sbjct: 753 LYEAAVRETMTFIESAEGIARRGLIMKLLGSLKQICNHPAQYLKEEPTRLAGRSGKLALL 812 Query: 60 EVIIEKA--NAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 + +++ +++ + S A + G + + + + Sbjct: 813 DELLDTILAEDGSVLIFTQYVSMARLLSAHLASRAIPSQLLHGGTPVAERERMVDRFQSA 872 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + ++ + WW+ +E R + G + V V Sbjct: 873 EVPVFLLSLKAAGTGLNLTRAAH-VIHYDRWWNPA-----VEEQATDRAYRIGQTQPVQV 926 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ T+++ + + LR+K + D +L + + + Sbjct: 927 HRLIAEGTVEDRISELLRSKRALADAVLGSGEAALTEL 964 >gi|237738632|ref|ZP_04569113.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229424115|gb|EEO39162.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 438 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 116/207 (56%), Gaps = 9/207 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ +L+ I N+A+ + K LQLANGA+ YDE + EVHD KI+ Sbjct: 227 KAYDELEKKAILELEDTEITVANAAALSNKLLQLANGAI-YDENRKVFEVHDCKIERFLE 285 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---DPCTIQEWNEGKIPLLFAHPAS 118 +IE+ N P +V Y+F D R+ +A + + P +WN+G+I +L AHPAS Sbjct: 286 LIEQLNGKPALVFYNFQHDKDRIIEALKDSKLRIRLLKTPQDQLDWNKGEIDILLAHPAS 345 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 +GLNLQ GGN +++F L W LE +Q R + G V +++L+ + T DE Sbjct: 346 AAYGLNLQAGGNHVIWFGLNWSLELYQ-----QANKRLHRQGQTEKVIIHHLVCKETRDE 400 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 V++ L+ K +Q+ L+ +LK + V Sbjct: 401 DVMEALQNKGDVQEALVESLKVRIMKV 427 >gi|29828134|ref|NP_822768.1| SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] gi|29605236|dbj|BAC69303.1| putative SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] Length = 979 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 82/218 (37%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N + EE+ K++ L Sbjct: 752 LYEAVVRETLAEISGADSMARRGLIVKLLTGLKQICNHPAQFLKEERPNIAGRSGKLELL 811 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L++ G + + + + EG Sbjct: 812 DELLDTILSEGAGVLVFTQYVRMARLLERHLAARGVPSQFLHGGTPVHEREAMVHRFQEG 871 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V + WW+ +E R + G R V V Sbjct: 872 EVPVFLLSLKAAGTGLNLTR-AEHVVHYDRWWNPA-----VEAQATDRAYRIGQTRPVQV 925 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ TI++ + L K + D +L + + + Sbjct: 926 HRLIAEGTIEDRIADMLLRKRELADAVLGSGESALTEL 963 >gi|254975145|ref|ZP_05271617.1| SNF2-related protein [Clostridium difficile QCD-66c26] gi|255092535|ref|ZP_05322013.1| SNF2-related protein [Clostridium difficile CIP 107932] gi|255314272|ref|ZP_05355855.1| SNF2-related protein [Clostridium difficile QCD-76w55] gi|255516952|ref|ZP_05384628.1| SNF2-related protein [Clostridium difficile QCD-97b34] gi|255650054|ref|ZP_05396956.1| SNF2-related protein [Clostridium difficile QCD-37x79] gi|260683194|ref|YP_003214479.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Clostridium difficile CD196] gi|260686790|ref|YP_003217923.1| snf2-related protein [Clostridium difficile R20291] gi|306519589|ref|ZP_07405936.1| snf2-related protein [Clostridium difficile QCD-32g58] gi|260209357|emb|CBA62788.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Clostridium difficile CD196] gi|260212806|emb|CBE03974.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Clostridium difficile R20291] Length = 456 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 120/202 (59%), Gaps = 7/202 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y + ++E +L + I A ++A K LQLANGA+Y ++ K+ KE+H EK++AL+ Sbjct: 255 LKYYKELEKEKILELDRDIITASSAAVAANKLLQLANGAIYDND-KNVKELHREKLEALK 313 Query: 61 VIIEKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II+ +N PIIV Y++ D R +++ ++ I +WN G+I LL HPAS Sbjct: 314 EIIDVSNGKPIIVFYNYKHDYNRLMKEFKSLKPRTIENSKDIYDWNNGRIQLLLCHPAST 373 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+I+V+F L W LE +Q R + G + V +++LI + TIDE Sbjct: 374 GHGLNLQSGGSIIVWFGLTWSLELYQ-----QANARLYRQGQRETVIIHHLICKGTIDEQ 428 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 V++ + K Q LL A+K + Sbjct: 429 VMEAIENKDKGQSALLEAVKAK 450 >gi|126659998|ref|ZP_01731121.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] gi|126618763|gb|EAZ89509.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] Length = 854 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 77/213 (36%), Gaps = 25/213 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 M Y +R+ L + + +K + ++ + K+ Sbjct: 634 MALYEALRRDSLEKLSESDDSGGQKHLQVLAALMKLRRCCCHPSLVLDDAS---LKGSKL 690 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 + + I+E+ N +V F L ++ + + ++ + Sbjct: 691 QLFQEILEELLDNRHKALVFSQFVDHLQIIKSHLDRQKISYQYLDGSTPKKERQRRVKAF 750 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + + G GLNL + ++ WW+ +E R + G +R Sbjct: 751 QSGEGDVFLISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQATDRAYRIGQQRP 804 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L+A++TI+E ++Q K + D LL+ Sbjct: 805 VTVYRLVAKDTIEEKIVQLHHRKRDLADSLLSG 837 >gi|227496460|ref|ZP_03926744.1| helicase [Actinomyces urogenitalis DSM 15434] gi|226834016|gb|EEH66399.1| helicase [Actinomyces urogenitalis DSM 15434] Length = 457 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 113/200 (56%), Gaps = 7/200 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + ++ L G ++A N+A + K LQ+A+G V YD+ EVH KI AL +I Sbjct: 256 YEALREQMVLGLDGALVDAGNAAGLSNKLLQMASGCV-YDDGGAVVEVHRAKIDALADLI 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E A+ +P++VAY + SDL RL + G + ++++WN G IP+ HPAS GHGL Sbjct: 315 EAASGSPVMVAYWYASDLERLLQ-AVPGAVELRSAESMRQWNAGCIPVGLIHPASAGHGL 373 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ LV+ + W LE +QQ R+ + G V +++LIA TID VL+ Sbjct: 374 NLQAGGHHLVWLTAPWSLELYQQTNARLA-----RQGQTHPVSIHHLIAAGTIDVDVLRA 428 Query: 184 LRTKSTIQDLLLNALKKETI 203 L K Q L++A++ + Sbjct: 429 LERKDVTQSALVDAVRAQLT 448 >gi|254384222|ref|ZP_04999566.1| SNF2/RAD54 family helicase [Streptomyces sp. Mg1] gi|194343111|gb|EDX24077.1| SNF2/RAD54 family helicase [Streptomyces sp. Mg1] Length = 936 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 80/218 (36%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKAL 59 Y E ++ Q+ N Y +E+ + H K+ L Sbjct: 710 LYQAAVDEAMAVIEASEGMERRGMIMKLLASLKQICNHPAQYLKEEQPRIAHRSGKLALL 769 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ ++V + + +++ G + + + + G Sbjct: 770 DELLDTILAEGGSVLVFTQYVTMARLIERHLAARGIANQLLHGGTPVPRREELVDRFQAG 829 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL G+ ++ F WW+ +E R + G + V V Sbjct: 830 EVPVFLLSLKAAGTGLNLTRAGH-VIHFDRWWNPA-----VEEQATDRAYRIGQTQPVQV 883 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + +IA+ T+++ + + L K + D +L + + + Sbjct: 884 HRIIAEGTVEDRIAEMLEAKRALADAVLGSGESALTEL 921 >gi|159146264|gb|ABW90595.1| DEAD box helicase [Bacteriophage APSE-2] Length = 295 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 104/177 (58%), Positives = 140/177 (79%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 YH ++EL+ +L IEA N+A+KT+K LQ+A+GA+Y D+ +W +HD KI+ALE I+ Sbjct: 119 YHAMEKELFLELSDSAIEALNAAAKTIKNLQIASGAIYSDDNHNWTAIHDAKIQALESIV 178 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 ++ P++VAYH+ DL RL KAFP+G+ LD +P T+ WN GKIPLLFAHPASCGHGL Sbjct: 179 NESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGHGL 238 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 NLQ GGNILVFFS WWDLE++QQ+IERIG TRQ QAG R VF+++++A++T+DE+V Sbjct: 239 NLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVV 295 >gi|77412062|ref|ZP_00788388.1| SNF2 domain protein [Streptococcus agalactiae CJB111] gi|77161867|gb|EAO72852.1| SNF2 domain protein [Streptococcus agalactiae CJB111] Length = 458 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 9/203 (4%) Query: 4 YHKFQREL-YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F+++ DL+ + A N+AS + K LQ+ANGAVY ++ +HD+K+ ALE I Sbjct: 256 YKQFKKDYVLADLENGEVTAANAASLSNKLLQMANGAVYSNDH-QVVSLHDQKLDALEDI 314 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ---GRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IE AN P++VAY F D+ R+++ + T+ K I+EWN+GKI + HPAS Sbjct: 315 IEAANGEPVLVAYWFKHDVQRIEERLVKLKVKGTILKTEEDIREWNKGKISVGLLHPASA 374 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+ LV+F L W LE +QQ R+ Q V + +++ Q TIDE Sbjct: 375 GHGLNLQKGGHHLVWFGLIWSLELYQQTNARLWR----QGQQADTVVIQHIVTQGTIDEE 430 Query: 180 VLQRLRTKSTIQDLLLNALKKET 202 +L+ L +K Q L+ A+K + Sbjct: 431 ILKALESKDAQQSRLIEAVKAQV 453 >gi|300812688|ref|ZP_07093097.1| SNF2 family N-terminal domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496315|gb|EFK31428.1| SNF2 family N-terminal domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 636 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 74/203 (36%), Positives = 120/203 (59%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ I A N+A + QLA+GA+Y ++ +H++E+ EKI++ Sbjct: 437 KSYQQLKKDQVLDLPGQEISADNAAVLAGRLRQLASGAIYEEDGEHYQEIFAEKIESC-F 495 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----DPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL + + + P I+ WN+GKIP++ PA Sbjct: 496 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDGSPGMIRRWNKGKIPVMLVQPA 555 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ + G K+ V +++L+ + TID Sbjct: 556 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL-----YRQGQKKPVIIHHLLTKGTID 610 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 611 RHVLDSLKKKDLSQQALLAAVRR 633 >gi|50843064|ref|YP_056291.1| phage-associated protein [Propionibacterium acnes KPA171202] gi|50840666|gb|AAT83333.1| conserved phage-associated protein [Propionibacterium acnes KPA171202] gi|315106939|gb|EFT78915.1| protein, SNF2 family [Propionibacterium acnes HL030PA1] Length = 458 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 86/203 (42%), Positives = 119/203 (58%), Gaps = 7/203 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + + +L DL G+ ++A N+A+ + K LQLA+GA+ YDE EVH K+ ALE I Sbjct: 255 VYEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAI-YDEHGDTVEVHGAKLDALEDI 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN ++VAY + D R+Q+ FPQ R K I+ WN G IPL HPAS GHG Sbjct: 314 IEAANGQTVLVAYWYRHDRERIQRRFPQAR-ELKTSADIEAWNRGDIPLGLIHPASAGHG 372 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG++LV+FSL W LE +QQ R+ + G V + +L A T+D+ VL+ Sbjct: 373 LNLQSGGHLLVWFSLTWSLELYQQTNARL-----YRQGQAEPVTITHLTATGTLDQAVLK 427 Query: 183 RLRTKSTIQDLLLNALKKETIHV 205 L K Q L++A+ E + Sbjct: 428 ALEAKDMTQAALIDAVATELTTI 450 >gi|313813466|gb|EFS51180.1| protein, SNF2 family [Propionibacterium acnes HL025PA1] Length = 458 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 86/203 (42%), Positives = 119/203 (58%), Gaps = 7/203 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + + +L DL G+ ++A N+A+ + K LQLA+GA+ YDE EVH K+ ALE I Sbjct: 255 VYEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAI-YDEHGDTVEVHGAKLDALEDI 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN ++VAY + D R+Q+ FPQ R K I+ WN G IPL HPAS GHG Sbjct: 314 IEAANGQTVLVAYWYRHDRERIQRRFPQAR-ELKTSADIEAWNRGDIPLGLIHPASAGHG 372 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG++LV+FSL W LE +QQ R+ + G V + +L A T+D+ VL+ Sbjct: 373 LNLQSGGHLLVWFSLTWSLELYQQTNARL-----YRQGQAEPVTITHLTATGTLDQAVLK 427 Query: 183 RLRTKSTIQDLLLNALKKETIHV 205 L K Q L++A+ E + Sbjct: 428 ALEAKDMTQAALIDAVATELTTI 450 >gi|104773892|ref|YP_618872.1| hypothetical protein Ldb0824 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103422973|emb|CAI97646.1| Hypothetical protein Ldb0824 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 638 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 74/203 (36%), Positives = 120/203 (59%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ I A N+A + QLA+GA+Y ++ +H++E+ EKI++ Sbjct: 439 KSYQQLKKDQVLDLPGQEISAENAAVLAGRLRQLASGAIYEEDGEHYQEIFAEKIESC-F 497 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----DPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL + + + P I+ WN+GKIP++ PA Sbjct: 498 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDSSPGMIRRWNKGKIPVMLVQPA 557 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ + G K+ V +++L+ + TID Sbjct: 558 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL-----YRQGQKKPVIIHHLLTKGTID 612 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 613 RHVLDSLKKKDLSQQALLAAVRR 635 >gi|116513899|ref|YP_812805.1| SNF2 family DNA/RNA helicase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093214|gb|ABJ58367.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125562|gb|ADY84892.1| SNF2 domain protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 638 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 74/203 (36%), Positives = 120/203 (59%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ I A N+A + QLA+GA+Y ++ +H++E+ EKI++ Sbjct: 439 KSYQQLKKDQVLDLPGQEISAENAAVLAGRLRQLASGAIYEEDGEHYQEIFAEKIESC-F 497 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----DPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL + + + P I+ WN+GKIP++ PA Sbjct: 498 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDGSPGMIRRWNKGKIPVMLVQPA 557 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ + G K+ V +++L+ + TID Sbjct: 558 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL-----YRQGQKKPVIIHHLLTKGTID 612 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 613 RHVLDSLKKKDLSQQALLAAVRR 635 >gi|160898846|ref|YP_001564428.1| helicase-like protein [Delftia acidovorans SPH-1] gi|160364430|gb|ABX36043.1| helicase-like protein [Delftia acidovorans SPH-1] Length = 477 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 90/200 (45%), Positives = 136/200 (68%), Gaps = 2/200 (1%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + REL ++ G+ IEAF++ +K+ K LQ+A+GA Y D++ W VHDEKI+AL+ Sbjct: 275 RQYDEMARELATEIDGQVIEAFSAGTKSQKLLQIASGAAYTDDQGAWALVHDEKIEALKS 334 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E+A P++V YHF SDLAR++KAFP+ RT D +++ G++ +L HPAS GH Sbjct: 335 VVEEALGMPLLVFYHFKSDLARIRKAFPKART-LDDKGAKEDFEAGRLQMLVVHPASAGH 393 Query: 122 GLN-LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G++ LQ+G VFFS W E Q IERIG TRQ Q+G+ R V V+ L+A++T++E Sbjct: 394 GVDGLQHGTCQCVFFSTNWSAENDAQAIERIGPTRQMQSGYDRPVTVHRLVARDTVEESA 453 Query: 181 LQRLRTKSTIQDLLLNALKK 200 + RLR++ ++ + L LKK Sbjct: 454 MYRLRSRVSVDEALRQGLKK 473 >gi|318064550|gb|ADV36504.1| helicase [Edwardsiella phage eiMSLS] Length = 449 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 95/208 (45%), Positives = 135/208 (64%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-----KHWKEVHDEKI 56 K Y + L+ +L+ IEA N+A+KT KCLQ+A GA Y + K W E+H K+ Sbjct: 238 KIYDDMENALFAELESGEIEASNAAAKTAKCLQIAGGACYITTDDGEASKEWTEIHKAKL 297 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLF 113 ALE IIE+ N +P++VAY + DL RL K FPQGR + K + +WN GK+P++F Sbjct: 298 DALESIIEELNGSPLLVAYQYKHDLVRLLKRFPQGRAMRKGLKGNNDMADWNAGKVPIMF 357 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG L FF+ W+ E++ Q++ERIG RQ QAG R V++Y + A+ Sbjct: 358 VHPASAGHGLNLQDGGCHLAFFNDTWNYEQYAQIVERIGPVRQHQAGHPRTVYIYIIQAR 417 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DE+V R K+ +QDLL++ +K++ Sbjct: 418 GTLDEVVALRRDDKAEVQDLLMDYMKRK 445 >gi|283851358|ref|ZP_06368640.1| SNF2-related protein [Desulfovibrio sp. FW1012B] gi|283573308|gb|EFC21286.1| SNF2-related protein [Desulfovibrio sp. FW1012B] Length = 1072 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 28/221 (12%) Query: 1 MKQY----HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVH 52 ++ Y K + ++ + + + + +K Q+ D + Sbjct: 845 LELYAALAKKLKEQVLATVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDLPGVNTNLP 904 Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTI 101 K A + +I ++V F L ++ G + D+ Sbjct: 905 SGKFDAFKDLITDCIEEGHKVLVFSQFVQMLHIIRSWMTISQMSFAYLDGSSKDRFDQVD 964 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + I + + G GLNL + ++ + WW+ +E R + G Sbjct: 965 RFNEDESIKVFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VENQATDRTHRIGQ 1018 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL---NALK 199 KR VF Y +I QNT++E +L+ K + + ++ +A K Sbjct: 1019 KRQVFSYKMICQNTVEEKILKLQEQKKDVAEAIIPGQDAFK 1059 >gi|302873665|ref|YP_003842298.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|307686611|ref|ZP_07629057.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|302576522|gb|ADL50534.1| SNF2-related protein [Clostridium cellulovorans 743B] Length = 457 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 117/200 (58%), Gaps = 7/200 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y K ++EL + ++ A +A + K LQ+ANGAV YDE KE+H+EK+KAL+ +I Sbjct: 256 YKKLEKELLLPFEEADVVANTAAVLSNKLLQMANGAV-YDENGEVKEIHNEKLKALDDVI 314 Query: 64 EKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 E AN I+V Y + DL R + + + I++WN+GKIP++ HPAS GHG Sbjct: 315 EAANGKSILVFYSYKHDLERLSKHLKNKAFKVLNTSKDIEKWNKGKIPIMLVHPASAGHG 374 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ+GGNI+V+F L W LE +Q R + G + V V ++IA+ TIDE V++ Sbjct: 375 LNLQFGGNIIVWFGLTWSLELYQ-----QANARLYRQGQTQGVIVNHIIAKGTIDEEVMK 429 Query: 183 RLRTKSTIQDLLLNALKKET 202 L K Q L+ A+K Sbjct: 430 ALENKEKGQSTLIEAVKARL 449 >gi|293401139|ref|ZP_06645283.1| SNF2 domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305265|gb|EFE46510.1| SNF2 domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 447 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 80/194 (41%), Positives = 108/194 (55%), Gaps = 7/194 (3%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 + + +L I A N+AS T K QLANGA+Y DE + E HD K+ ALE IIE A Sbjct: 259 LKADFILELPEGEITAANAASLTGKLSQLANGAIYDDE-SNIVEFHDRKLDALEDIIESA 317 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 N P++VAY F DL R++ K I +WN G IP+ HPAS GHGLNLQ Sbjct: 318 NGKPLLVAYWFKHDLQRIK--KHFDVREIKTSKDIIDWNNGDIPVAVIHPASAGHGLNLQ 375 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 GG+ L++F L W LE +QQ R+ Q V + ++I + TIDE +L+ L Sbjct: 376 AGGSTLIWFGLTWSLELYQQTNARLWRQGQSSG----TVVIEHIITKGTIDERILKALSL 431 Query: 187 KSTIQDLLLNALKK 200 K Q+ L++A+K Sbjct: 432 KEVSQNALIDAVKA 445 >gi|320530608|ref|ZP_08031660.1| protein, SNF2 family [Selenomonas artemidis F0399] gi|320137135|gb|EFW29065.1| protein, SNF2 family [Selenomonas artemidis F0399] Length = 429 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 114/202 (56%), Gaps = 7/202 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M++Y + +REL + +I A +A+ T K LQ+ANG+V YDE+ +H+ K AL+ Sbjct: 226 MRKYAEMERELVLSIGASDITAVTAAALTGKLLQMANGSV-YDEDGEAVTIHEAKADALD 284 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 II ++ Y + D A K P I++WN GKI LL HPAS G Sbjct: 285 EIIACNEGKSVMAIYSYRHDRA-TLLRRHPEARELKTPEDIRDWNAGKISLLLVHPASAG 343 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ+GG+I+V++ L W LE++Q R + G V +++LIA++T+DE V Sbjct: 344 HGLNLQHGGHIVVWYGLTWSLEQYQ-----QTNKRLHRPGQTEPVILHHLIAKDTVDEDV 398 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 ++ L KST Q+ +L A+K Sbjct: 399 MRALERKSTGQEGMLQAVKARL 420 >gi|284032554|ref|YP_003382485.1| SNF2-like protein [Kribbella flavida DSM 17836] gi|283811847|gb|ADB33686.1| SNF2-related protein [Kribbella flavida DSM 17836] Length = 979 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 73/212 (34%), Gaps = 20/212 (9%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y RE ++ S + Q+ N + E K+ AL+ Sbjct: 736 LYQAVARETLAKIEQAQGIERRGLVLSLLTQLKQVCNHPAQFLHEPGPLPRRSGKLAALD 795 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGK 108 +++ +++ + ++ G + + ++++ G+ Sbjct: 796 ELLDVILAEGESVLIFSQYVEMGRLIEAHLAARQIGALFLHGGVGVRRRQQMVEQFQAGE 855 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GL L +V + WW+ +E R + G R V V+ Sbjct: 856 SQVFLLSLKAGGVGLTLTK-ATHVVHYDRWWNPA-----VEDQATDRAYRIGQDRPVQVH 909 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 L+ ++T+++ + + K + D ++ + + Sbjct: 910 RLVTEHTLEDRIATVIAAKRELADAVIGSGEA 941 >gi|315654958|ref|ZP_07907863.1| SNF2 domain protein [Mobiluncus curtisii ATCC 51333] gi|315490919|gb|EFU80539.1| SNF2 domain protein [Mobiluncus curtisii ATCC 51333] Length = 452 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 119/199 (59%), Gaps = 7/199 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + E+ +L E I+A N+A K QLA+GA+ Y E VH K+ ALE Sbjct: 254 KVYDRLAAEMVVELGDEVIDAVNAAVLAGKLTQLASGAI-YTEAGDSIVVHGRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY + DLAR+++ FPQ + K I+ WN+G+IP+ HPAS GH Sbjct: 313 LIEAANGNPVLVAYWWQHDLARIRERFPQA-SQLKTSADIEAWNDGEIPIGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ G +IL+++SL W LE +QQ R+ + G + V + ++ +++ID+ +L Sbjct: 372 GLNLQQGSSILIWYSLTWSLELYQQTNARL-----YRQGQTKPVTITHIATKDSIDQRIL 426 Query: 182 QRLRTKSTIQDLLLNALKK 200 L +K+ Q L++A+ + Sbjct: 427 SALESKNMTQSALIDAVAQ 445 >gi|134288567|ref|YP_001110806.1| putative helicase [Salmonella phage SETP3] gi|125631932|gb|ABN47335.1| putative helicase [Salmonella phage SETP3] Length = 821 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 91/209 (43%), Positives = 137/209 (65%), Gaps = 8/209 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-----KHWKEVHDEKI 56 + Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY K W++VHD K+ Sbjct: 611 QAYIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKDWEKVHDTKL 670 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ AP++VAY F +L R+ + FPQ + K ++ WN G+I +L Sbjct: 671 DALESIVEELQGAPLLVAYQFKHELERILRRFPQAQAFAKGAKGNKQMESWNRGEIEILC 730 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A+ Sbjct: 731 VHPASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAK 790 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +T+DE+V R K ++Q+ LLN +K+ Sbjct: 791 DTLDEVVAARTDEKKSVQEELLNYMKRRG 819 >gi|318064334|gb|ADV36398.1| helicase [Edwardsiella phage eiAU] Length = 449 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 95/208 (45%), Positives = 135/208 (64%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-----KHWKEVHDEKI 56 K Y + L+ +L+ IEA N+A+KT KCLQ+A GA Y + K W E+H K+ Sbjct: 238 KIYDDMENALFAELESGEIEASNAAAKTAKCLQIAGGACYITTDDGEASKEWTEIHKAKL 297 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLF 113 ALE IIE+ N +P++VAY + DL RL K FPQGR + K + +WN GK+P++F Sbjct: 298 DALESIIEELNGSPLLVAYQYKHDLVRLLKRFPQGRAMRKGLKGNNDMADWNAGKVPIMF 357 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG L FF+ W+ E++ Q++ERIG RQ QAG R V++Y + A+ Sbjct: 358 VHPASAGHGLNLQDGGCHLAFFNDTWNYEQYAQIVERIGPVRQHQAGHPRTVYIYIIQAR 417 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DE+V R K+ +QDLL++ +K++ Sbjct: 418 GTLDEVVALRRDDKAEVQDLLMDYMKRK 445 >gi|266623803|ref|ZP_06116738.1| SNF2 domain protein [Clostridium hathewayi DSM 13479] gi|288864375|gb|EFC96673.1| SNF2 domain protein [Clostridium hathewayi DSM 13479] Length = 457 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 109/204 (53%), Gaps = 9/204 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y++ +RE+ L E I ++A+ + K LQLANGAVY ++ EVH+ KI+A Sbjct: 255 KAYYEMEREMVLALPEEEISVTSAAALSNKLLQLANGAVYDEDHSVH-EVHNCKIEAFME 313 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPAS 118 +IE P +V Y+F D AR+ KA + ++ +WN KI +L HPAS Sbjct: 314 LIESLQGKPALVFYNFQHDRARILKALEKTGLRVRELKTTQDEDDWNARKIDILLTHPAS 373 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 +GLNLQ GGN +++F L W+ E + R + G + V +++LI T DE Sbjct: 374 SAYGLNLQQGGNHVIWFGLTWNYELYT-----QANKRLHRQGQEEKVIIHHLICSGTRDE 428 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 V++ L+ K +Q ++ +LK Sbjct: 429 DVMEALKRKDDVQSWVMESLKARI 452 >gi|289450552|ref|YP_003475678.1| SNF2 family N-terminal domain-containing protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185099|gb|ADC91524.1| SNF2 family N-terminal domain protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 1107 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 78/218 (35%), Gaps = 33/218 (15%) Query: 2 KQYHKFQRELYCDL---------QGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWK 49 K Y + E L GE I + S + Q+A + E H Sbjct: 878 KIYQTYLAEARRQLQSITGPDWQNGERISTKHTMEILSLLTRLRQIACHPALFLENYH-- 935 Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKD 97 K++ LE I+ A I++ F + LA G + + Sbjct: 936 -GSSGKLELLEEILTTALAGGHRILIFSQFTALLAIIKPLLERLAITYMYIDGGVSPKER 994 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++N G+ + + G GLNL G + ++ WW+ Q R Sbjct: 995 TDLVNKFNAGEGEVFLISLKAGGTGLNLT-GADTVILMDPWWNPAVEQ-----QATDRSH 1048 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R V VY LIA+ TI+E + K + D ++ Sbjct: 1049 RLGQQRRVQVYRLIAKGTIEEKIRNLQERKQNLIDQVV 1086 >gi|258405011|ref|YP_003197753.1| SNF2-like protein [Desulfohalobium retbaense DSM 5692] gi|257797238|gb|ACV68175.1| SNF2-related protein [Desulfohalobium retbaense DSM 5692] Length = 1068 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 77/214 (35%), Gaps = 25/214 (11%) Query: 1 MKQY----HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVH 52 M+ Y K + ++ D+ + I + +K Q+ D + Sbjct: 841 MELYASLAKKLKEQVLRDVDEKGIAKSQMSILDALLKLRQICCHPRLLKLDMPGVSTNLP 900 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTI 101 K + + ++ + ++V F L ++ G + D+ Sbjct: 901 SGKFETFKDLVTGIIDDGHKVLVFSQFVQMLHIIRSWLSMNKVPFAYLDGTSKDRFEQVE 960 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N IP+ + G GLNL + ++ + WW+ +E R + G Sbjct: 961 NFNNNPDIPIFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VEDQATDRTHRIGQ 1014 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + VF Y LI +NT++E +L+ K + + ++ Sbjct: 1015 TKKVFSYKLICENTVEEKILKLQEQKKGVAEAII 1048 >gi|302561960|ref|ZP_07314302.1| SNF2/helicase domain-containing protein [Streptomyces griseoflavus Tu4000] gi|302479578|gb|EFL42671.1| SNF2/helicase domain-containing protein [Streptomyces griseoflavus Tu4000] Length = 652 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 79/212 (37%), Gaps = 21/212 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ G + Q+ N + EE+ K++ L Sbjct: 425 LYEAVVREALAEIAGADGVTRRGLIVKLLTGLKQICNHPAQFLKEERPVVAGRSGKLELL 484 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ A ++V + L++ G + ++ + +G Sbjct: 485 DELLDTVLTEGAGVLVFTQYVRMARLLERHLAARGVPAQFLHGGTPVAGREAMVRRFQDG 544 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V + WW+ +E R + G R V V Sbjct: 545 EVPVFLLSLKAAGTGLNLTR-AEHVVHYDRWWNPA-----VEAQATDRAYRIGQTRPVQV 598 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +IA+ T+++ + L K + D +L + + Sbjct: 599 HRIIAEGTVEDRIAALLERKRELADAVLGSGE 630 >gi|297587094|ref|ZP_06945739.1| SNF2 domain protein [Finegoldia magna ATCC 53516] gi|297575075|gb|EFH93794.1| SNF2 domain protein [Finegoldia magna ATCC 53516] Length = 447 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 125/198 (63%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +++L ++ ++I+A N+A+ + K LQ+A+G+V YDE+K+ +HD K+ ALE + Sbjct: 255 IYETLKKDLVVSIKDKDIDAVNAAALSNKLLQMASGSV-YDEDKNMIHIHDRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY + SDL R++ K ++EWN+G IP+ HPAS GHG Sbjct: 314 IEGANGKPVLIAYWYKSDLKRIK--DRFDVRELKASEDLKEWNQGNIPVAIIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++FSL W LE ++Q R+ + G K V +++++A+ TIDE V++ Sbjct: 372 LNLQAGGSTLIWFSLTWSLELYEQTNARL-----YRQGQKETVVIHHILAKGTIDEDVMK 426 Query: 183 RLRTKSTIQDLLLNALKK 200 L K+ Q L++A+K Sbjct: 427 ALENKNKTQAALIDAVKA 444 >gi|297190045|ref|ZP_06907443.1| helicase [Streptomyces pristinaespiralis ATCC 25486] gi|297150349|gb|EFH30576.1| helicase [Streptomyces pristinaespiralis ATCC 25486] Length = 700 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE + G Q+ N Y EE+ E K++ L Sbjct: 473 LYEAVVRETLAAISEAGGMERRGLVVKLLTALKQICNHPAQYLKEERPRVEGRSGKLELL 532 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L+ G + + + + G Sbjct: 533 DELLDTILSEDASVLVFTQYVQMARLLEGHLARRGVRTQFLHGGTPVPEREAMVNRFQNG 592 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V + WW+ +E R + G R V V Sbjct: 593 EVPVFLLSLKAAGTGLNLTR-AEHVVHYDRWWNPA-----VEAQATDRAYRIGQDRPVQV 646 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ TI++ + + L K + D +L A + + Sbjct: 647 HRLIAEGTIEDRIARMLERKKDLADSVLGAGEAALTEL 684 >gi|291449545|ref|ZP_06588935.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] gi|291352492|gb|EFE79396.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] Length = 946 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ Q+ N + EE+ K++ L Sbjct: 719 LYEAVVRETLAEISAADGFERRGLVMKLLTSLKQICNHPAQFLKEEQPRIADRSGKVELL 778 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ ++V + L++ G + + + + G Sbjct: 779 DELLDTILAERGSVLVFTQYVQMARLLEEHLAARGVDTQFLHGGTPVARREEMVARFQSG 838 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GLNL G+ +V F WW+ +E R + G + V V Sbjct: 839 EAPVFLLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEAQATDRAYRIGQTQPVQV 892 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ TI++ + L K + D +L + + + Sbjct: 893 HRLIAEGTIEDRIAGMLARKQGLADAVLGSGEAALTEL 930 >gi|239946094|ref|ZP_04698031.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 15998] gi|239992567|ref|ZP_04713231.1| SNF2/RAD54 family helicase [Streptomyces roseosporus NRRL 11379] Length = 1005 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ Q+ N + EE+ K++ L Sbjct: 778 LYEAVVRETLAEISAADGFERRGLVMKLLTSLKQICNHPAQFLKEEQPRIADRSGKVELL 837 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ ++V + L++ G + + + + G Sbjct: 838 DELLDTILAERGSVLVFTQYVQMARLLEEHLAARGVDTQFLHGGTPVARREEMVARFQSG 897 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GLNL G+ +V F WW+ +E R + G + V V Sbjct: 898 EAPVFLLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEAQATDRAYRIGQTQPVQV 951 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ TI++ + L K + D +L + + + Sbjct: 952 HRLIAEGTIEDRIAGMLARKQGLADAVLGSGEAALTEL 989 >gi|318064442|gb|ADV36452.1| helicase [Edwardsiella phage eiDWF] Length = 449 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 95/208 (45%), Positives = 135/208 (64%), Gaps = 8/208 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-----KHWKEVHDEKI 56 K Y + L+ +L+ IEA N+A+KT KCLQ+A GA Y + K W E+H K+ Sbjct: 238 KIYDDMENALFAELESGEIEASNAAAKTAKCLQIAGGACYITTDDGEASKEWTEIHKAKL 297 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLF 113 ALE IIE+ N +P++VAY + DL RL K FPQGR + K + +WN GK+P++F Sbjct: 298 DALESIIEELNGSPLLVAYQYKHDLVRLLKRFPQGRAMRKGLKGNNDMADWNAGKVPIMF 357 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG L FF+ W+ E++ Q++ERIG RQ QAG R V++Y + A+ Sbjct: 358 XHPASAGHGLNLQDGGCHLAFFNDTWNYEQYAQIVERIGPVRQHQAGHPRTVYIYIIQAR 417 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DE+V R K+ +QDLL++ +K++ Sbjct: 418 GTLDEVVALRRDDKAEVQDLLMDYMKRK 445 >gi|300933478|ref|ZP_07148734.1| phage-associated protein [Corynebacterium resistens DSM 45100] Length = 453 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 83/197 (42%), Positives = 116/197 (58%), Gaps = 7/197 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + E+ DL G+ I+A N+A+ + K LQLA+GA+ YDE+ + VHD K+ ALE Sbjct: 254 KAYERLRDEMVLDLDGQVIDAANAAALSGKLLQLASGAI-YDEDGNTVVVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F D R+ G I +WN ++PL HPAS GH Sbjct: 313 LVEAANGQPLLVAYWFKHDRERI-TTRFPGARELTTSADITQWNAREVPLALIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGN+LV+FSL W LE +QQ R+ + G + V + +L A +T+DE VL Sbjct: 372 GLNLQQGGNLLVWFSLTWSLELYQQTNARL-----YRQGQDQPVTITHLAADHTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNAL 198 L K Q L+NA+ Sbjct: 427 AALDNKDMTQAALINAV 443 >gi|325478705|gb|EGC81816.1| type III restriction enzyme, res subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 448 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 125/198 (63%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +++L ++ ++I+A N+A+ + K LQ+A+G+V YDE+K+ +HD K+ ALE + Sbjct: 255 IYETLKKDLVVSIKDKDIDAVNAAALSNKLLQMASGSV-YDEDKNMIHIHDRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY + SDL R++ K +EWN+GKIP+ HPAS GHG Sbjct: 314 IEGANGKPVLIAYWYKSDLKRIK--DRFDLRELKTSEDFKEWNQGKIPVAIIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++FSL W LE ++Q R+ + G K V +++++A+ TIDE V++ Sbjct: 372 LNLQAGGSTLIWFSLTWSLELYEQTNARL-----YRQGQKETVVIHHILAKGTIDEDVMK 426 Query: 183 RLRTKSTIQDLLLNALKK 200 L K+ Q L++A+K Sbjct: 427 ALENKNKTQAALIDAVKA 444 >gi|29826907|ref|NP_821541.1| SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] gi|29604004|dbj|BAC68076.1| putative SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] Length = 950 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 74/222 (33%), Gaps = 25/222 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEK-----HWKEVHDEK 55 Y RE + A Q+ N Y +E K Sbjct: 720 LYEAVVRETMAKIAEAEGIARRGLVLKLLTALKQICNHPAQYLKEHSLRQSTPLNGRSGK 779 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQE 103 + L+ +++ ++V + L+K G + + Sbjct: 780 LDLLDELVDTITAEGESVLVFTQYKQMATLLEKHLAERGVPTLFLHGGTPVTAREEMVDR 839 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G++P+ + G GLNL +V + WW+ +E R + G + Sbjct: 840 FQRGEVPVFLLSLKAAGTGLNLTR-ATHVVHYDRWWNPA-----VEDQATDRAYRIGQDK 893 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V+ LIA+ T+++ V + L K + D ++ + + + Sbjct: 894 PVQVHKLIAEGTVEDKVAKLLEAKRALADAVVGSGEAALTEL 935 >gi|239908234|ref|YP_002954975.1| putative helicase [Desulfovibrio magneticus RS-1] gi|239798100|dbj|BAH77089.1| putative helicase [Desulfovibrio magneticus RS-1] Length = 1075 Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 77/221 (34%), Gaps = 28/221 (12%) Query: 1 MKQY----HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVH 52 ++ Y K + ++ + + + + +K Q+ D + Sbjct: 848 LELYAALAKKLKEQVLATVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDLPGVNTNLP 907 Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTI 101 K A + +I ++V F L ++ G + D+ Sbjct: 908 SGKFDAFKDLITDCIEEGHKVLVFSQFVQMLHIIRSWMSISQMPFCYLDGSSKDRFDQVD 967 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + I + + G GLNL + ++ + WW+ +E R + G Sbjct: 968 KFNQTEDIKVFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VENQATDRTHRIGQ 1021 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL---NALK 199 R VF Y LI QNT++E +L+ K + + ++ +A K Sbjct: 1022 LRQVFSYKLICQNTVEEKILKLQEQKKDVAEAVIPGQDAFK 1062 >gi|315656930|ref|ZP_07909817.1| SNF2 domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492885|gb|EFU82489.1| SNF2 domain protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 458 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 118/201 (58%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + +L DL G I+A N+A+ + K LQLA+GA+Y W VH+ K+ LE Sbjct: 254 KVYEQLKADLVLDLDGATIDAANAAALSGKLLQLASGAIYTS-NGQWTAVHERKLDVLED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY F D R+ FPQ R K I+ WN+G+I L HPAS GH Sbjct: 313 LIEAANGNPLLVAYWFTHDRQRITARFPQAR-ELKTSADIETWNKGEITLGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG++LV+FSL W LE +QQ R+ + G V + +L+A+ T+DE VL Sbjct: 372 GLNLQAGGHLLVWFSLTWSLELYQQTNARL-----YRQGQSEPVTITHLVAEGTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L K Q L++A+ E Sbjct: 427 KALDAKDATQAALIDAVAHEI 447 >gi|32141133|ref|NP_733524.1| helicase [Streptomyces coelicolor A3(2)] gi|24413742|emb|CAD55164.1| putative helicase [Streptomyces coelicolor A3(2)] Length = 890 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 81/218 (37%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N + E++ K++ L Sbjct: 663 LYEAVVREALAEIAGADHMARRGMIVKLLTNLKQICNHPAQFLKEDRPKITGRSGKLELL 722 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L++ G ++ ++ + +G Sbjct: 723 DELLDTILSEQASVLVFTQYVQMARLLEQHLAARGVSSLFLHGGTSVTARESLVRRFQDG 782 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL +V + WW+ +E R + G R V V Sbjct: 783 DAPVFLLSLKAAGTGLNLTR-AEHVVHYDRWWNPA-----VEAQATDRAYRIGQTRPVQV 836 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ TI++ + L K + D +L + + + Sbjct: 837 HRLIAEGTIEDRIAALLNRKRELADAVLGSGEAALTEL 874 >gi|50914495|ref|YP_060467.1| Phage-related DNA helicase [Streptococcus pyogenes MGAS10394] gi|40218555|gb|AAR83209.1| phage helicase [Streptococcus pyogenes] gi|50261600|gb|AAT72368.1| helicase [Streptococcus pyogenes] gi|50903569|gb|AAT87284.1| Phage-related DNA helicase [Streptococcus pyogenes MGAS10394] Length = 458 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 76/203 (37%), Positives = 116/203 (57%), Gaps = 9/203 (4%) Query: 4 YHKFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F++E +L G + A N+AS K +QL+NGAV Y ++ +H++K+ ALE I Sbjct: 256 YIQFKKEYVLSELDGLEVTAANAASLMNKLVQLSNGAV-YSDDHTVVPLHEQKLDALEDI 314 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---DPCTIQEWNEGKIPLLFAHPASC 119 +E AN P++VAY F DLAR+ + + + I+EWN+G +P+ HPA Sbjct: 315 LESANGEPVLVAYWFKHDLARITGRLEKLKVTSRVLKTEEDIREWNKGNVPVGLIHPAGA 374 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+ LV+F L W LE +QQ R+ Q V + +++ + TIDE Sbjct: 375 GHGLNLQKGGHHLVWFGLTWSLELYQQTNARLWR----QGQEAETVVIQHIVTEGTIDEE 430 Query: 180 VLQRLRTKSTIQDLLLNALKKET 202 +L+ L K Q+ L+ A+K + Sbjct: 431 ILKALGNKDAQQERLIEAVKAQV 453 >gi|126348422|emb|CAJ90145.1| putative helicase [Streptomyces ambofaciens ATCC 23877] Length = 976 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 82/218 (37%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N + E++ K++ L Sbjct: 749 LYEAVVREALAEIAGADSMARRGMIVKLLTSLKQICNHPAQFLKEDRPRITGRSGKLELL 808 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ + ++V + L++ G ++ ++ + +G Sbjct: 809 DELLDTILAEESSVLVFTQYVQMARLLERHLTARGVSSLFLHGGTSVTARESLVRRFQDG 868 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V F WW+ +E R + G R V V Sbjct: 869 EVPVFLLSLKAAGTGLNLTR-AEHVVHFDRWWNPA-----VEAQATDRAYRIGQTRPVQV 922 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + L+A+ T+++ + L K + D +L A + + Sbjct: 923 HRLVAEGTVEDRIAALLHRKRKLADAVLGAGEAALTEL 960 >gi|328913305|gb|AEB64901.1| SWI/SNF chromatin-remodeling complex subunit snf22 SWI/SNF complex subunit snf22; ATP-dependent helicase snf22 [Bacillus amyloliquefaciens LL3] Length = 424 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 81/199 (40%), Positives = 121/199 (60%), Gaps = 7/199 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +++L ++ A +A + K LQLANGAV YDE +++HDEK+ ALE I+ Sbjct: 229 YKQLEKDLLLPFLDGDVVADTAAVLSNKLLQLANGAV-YDENGEIQKLHDEKLNALEDIV 287 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 + AN PI+V Y + DL R+Q+ F + +TLD I +WN GKI +L AHPAS GHGL Sbjct: 288 DAANGKPILVFYSYKHDLERIQQKFKKAKTLDSSRE-IADWNNGKIEMLLAHPASTGHGL 346 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+++V+F + W LE +Q R + G K +V V +L+ + T+DE V++ Sbjct: 347 NLQDGGHVIVWFGMTWSLELYQ-----QANARLDRQGQKHSVIVNHLVTEGTVDEDVMRA 401 Query: 184 LRTKSTIQDLLLNALKKET 202 L K+ Q+ L+ A+K Sbjct: 402 LEGKAVGQNALMEAVKARL 420 >gi|319757800|gb|ADV69742.1| phage related DNA helicase [Streptococcus suis JS14] Length = 458 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 78/203 (38%), Positives = 117/203 (57%), Gaps = 9/203 (4%) Query: 4 YHKFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F++E +L G + A N+AS T K +QL+NGAV Y ++ +H++K+ ALE I Sbjct: 256 YSQFKKEYVMSELDGLEVTAANAASLTNKLVQLSNGAV-YSDDHTVVALHEQKLDALEDI 314 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---DPCTIQEWNEGKIPLLFAHPASC 119 +E AN P++VAY F DLAR+ + R + I+EWN+G +P+ HPA Sbjct: 315 LESANGEPVLVAYWFKHDLARIINRIEKLRVKSRVLKTEEDIREWNKGNVPVGLLHPAGA 374 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+ LV+F L W LE +QQ R+ Q V + +++ + TIDE Sbjct: 375 GHGLNLQKGGHNLVWFGLTWSLELYQQTNARLWR----QGQESETVVIQHIVTEGTIDEE 430 Query: 180 VLQRLRTKSTIQDLLLNALKKET 202 +L+ L K Q+ L+ A+K + Sbjct: 431 ILKALENKDAQQERLIEAVKAQV 453 >gi|126660775|ref|ZP_01731871.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] gi|126617919|gb|EAZ88692.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] Length = 1400 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 77/213 (36%), Gaps = 25/213 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 M Y +R+ L + + +K + ++ + K+ Sbjct: 1180 MALYEALRRDSLEKLSESDDSGGQKHLQVLAALMKLRRCCCHPSLVLDDAS---LKGSKL 1236 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 + + I+E+ N +V F L ++ + + ++ + Sbjct: 1237 QLFQEILEELLDNRHKALVFSQFVDHLQIIKSHLDRQKISYQYLDGSTPKKERQRRVKAF 1296 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + + G GLNL + ++ WW+ +E R + G +R Sbjct: 1297 QSGEGDVFLISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQATDRAYRIGQQRP 1350 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L+A++TI+E ++Q K + D LL+ Sbjct: 1351 VTVYRLVAKDTIEEKIVQLHHRKRDLADSLLSG 1383 >gi|331085752|ref|ZP_08334835.1| hypothetical protein HMPREF0987_01138 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406675|gb|EGG86180.1| hypothetical protein HMPREF0987_01138 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 448 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 84/201 (41%), Positives = 122/201 (60%), Gaps = 7/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y F+R++ + E ++A N+A+ + K LQ+ANGAV Y E+K +HD K+ ALE Sbjct: 252 KLYQSFERDMVLSIGEEELDAANAAALSNKLLQMANGAV-YGEDKKVISIHDRKLDALED 310 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN PI+VAY + DL R+QK P+ R +D I +WN G+I + HPAS GH Sbjct: 311 LVEAANGKPILVAYWYKHDLMRIQKRLPEARVID-TSKDITDWNHGEIAIGLIHPASAGH 369 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG +V+F L W LE +QQM R+ + G K V +++LI + T DE V+ Sbjct: 370 GLNLQEGGCTIVWFGLTWSLELYQQMNARLW-----RQGQKHTVVIHHLITKGTHDEDVM 424 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L K T Q L++A++ Sbjct: 425 KALEKKETGQSALIHAVRARI 445 >gi|120555512|ref|YP_959863.1| SNF2-related protein [Marinobacter aquaeolei VT8] gi|120325361|gb|ABM19676.1| SNF2-related protein [Marinobacter aquaeolei VT8] Length = 1086 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 75/209 (35%), Gaps = 27/209 (12%) Query: 3 QYHKFQ-------RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 Y + R+L + +G +K Q+ + E+ K Sbjct: 866 LYETIRATMDKRIRKLLAE-KGAARSQIEILDALLKLRQICCHPALLNPEETA---GSAK 921 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWN 105 + +L ++E+ +I+ F S LA ++ + ++ + Sbjct: 922 LDSLMEMLEQLLDEGRKVIIFSQFTSMLALIETTLKAAGIGYEKLTGQTRDRATPVKRFQ 981 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ P+ + G GLNL + ++ + WW+ Q R + G + V Sbjct: 982 NGESPVFLISLKAGGTGLNLTA-ADCVIHYDPWWNPAAEQ-----QATDRAWRIGQDKPV 1035 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 FVY LI + T++E + KS + D L Sbjct: 1036 FVYRLITEGTVEERIQALQARKSQLADGL 1064 >gi|46449909|gb|AAS96558.1| Snf2 family protein [Desulfovibrio vulgaris str. Hildenborough] Length = 1055 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 81/222 (36%), Gaps = 27/222 (12%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKALE 60 K + ++ D+ + + + +K Q+ D + K A + Sbjct: 836 RKLKEQVLADVDEKGLAKSQMSILDALLKLRQICCHPRLLKLDMPGFSTNLPSGKFDAFK 895 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKI 109 +I ++V F L ++ + G + D+ + N I Sbjct: 896 DMITDIVEEGHKVLVFSQFVQMLHIIRSWLQISGTPFCYLDGTSKDRFEQVDKFNNSPDI 955 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +E R + G R VF Y Sbjct: 956 PIFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VESQATDRTHRIGQTRQVFSYK 1009 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL------NALKKETIHV 205 LI QNT++E +L+ K + + ++ +L +E + + Sbjct: 1010 LICQNTVEEKILKLQDMKRGVAEAIIPGQETWKSLTREDLEM 1051 >gi|313895516|ref|ZP_07829072.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975642|gb|EFR41101.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 454 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 116/198 (58%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + ++++ L G I+A ++A+ + K LQ+ANGAV Y E +HD K+ ALE + Sbjct: 255 LYDRMKQDMVVALGGTEIDAVSAAALSGKLLQMANGAV-YTENGKSVHLHDRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P++VAY + DL R+++ P + I+ WN KI + HPAS GHG Sbjct: 314 VESANGKPVLVAYWYRHDLERIKERLP--VQEIRSSADIENWNAEKISVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ+GG+ L++F L W LE +QQ RI + G K V ++++I TIDE V+Q Sbjct: 372 LNLQFGGSTLIWFGLTWSLELYQQTNARI-----YRQGQKGTVVIHHIITVGTIDENVMQ 426 Query: 183 RLRTKSTIQDLLLNALKK 200 L K+ Q L++A+K Sbjct: 427 ALGRKNKTQTALIDAVKA 444 >gi|116623003|ref|YP_825159.1| SNF2-like protein [Candidatus Solibacter usitatus Ellin6076] gi|116226165|gb|ABJ84874.1| SNF2-related protein [Candidatus Solibacter usitatus Ellin6076] Length = 1073 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 78/215 (36%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + ++ +L QG + ++ Q A D + + K Sbjct: 851 KHYDELRKHYRENLLLRVQQQGIGKNKMHVLEALLRLRQAACHPGLLDAARIQE--PSAK 908 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEW 104 + L + + +V F S LA ++ + G T D+ Sbjct: 909 LDVLLDQLAELREEGHKALVFSQFTSLLAIVRDRLDAAGVRYEYLDGSTRDRQARVDTFQ 968 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + L + G GLNL + WW+ +E V R + G R Sbjct: 969 NDPQCTLFLISLKAGGLGLNLTA-AEYVFLLDPWWNPA-----VEAQAVDRAHRIGQTRP 1022 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VF Y LIA++T++E VL+ +TK + D +L Sbjct: 1023 VFAYRLIARDTVEEKVLELQKTKRELADAILGEDN 1057 >gi|34495520|ref|NP_899735.1| SWI/SNF family helicase [Chromobacterium violaceum ATCC 12472] gi|34101375|gb|AAQ57744.1| probable SWI/SNF family helicase [Chromobacterium violaceum ATCC 12472] Length = 910 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 71/209 (33%), Gaps = 25/209 (11%) Query: 3 QYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y ++E + + A + ++ + + + + K+ A Sbjct: 688 VYEAMRQEALARVAEADPAAGGQTMQALAELTRLRRFCCHPKLTQPDSA---LPASKLAA 744 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNE 106 I E+ N +V F LA G + ++ + Sbjct: 745 FAEICEELLDNGHKALVFSQFVDHLALVAEHLRQRGVRFHYLDGGTPSRQRKASMDAFQA 804 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G L + G GLNL + ++ WW+ +E R + G +R V Sbjct: 805 GDGDLFLISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQASDRAYRMGQQRPVT 858 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+A TI+E +++ R K + D LL Sbjct: 859 VYRLVAAGTIEEKIVELHRDKRALADSLL 887 >gi|313123514|ref|YP_004033773.1| superfamily ii DNA/RNA helicase, snf2 family [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280077|gb|ADQ60796.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 626 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 120/203 (59%), Gaps = 10/203 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +++ DL G+ + A N+A + QLA+GA+Y ++ +H++E+ EKI++ Sbjct: 427 KSYQQLKKDQVLDLPGQELSADNAAVLAGRLRQLASGAIYEEDGEHYQEIFAEKIESC-F 485 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----DPCTIQEWNEGKIPLLFAHPA 117 + A P +VAY+F SD +RL + + + P I+ WN+GKIP++ PA Sbjct: 486 YLTSNTATPSLVAYYFKSDASRLLAFYRKNGVKAELFDGSPGMIRRWNKGKIPVMLVQPA 545 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ GG+ L++F+L W LE++QQM R+ + G K+ V +++L+ + TID Sbjct: 546 SAGAGLNLQEGGHTLIWFTLPWSLEQYQQMNGRL-----YRQGQKKPVIIHHLLTKGTID 600 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 VL L+ K Q LL A+++ Sbjct: 601 RHVLDSLKKKDLSQQALLAAVRR 623 >gi|120602191|ref|YP_966591.1| SNF2-related protein [Desulfovibrio vulgaris DP4] gi|304569715|ref|YP_011298.2| Snf2 family protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562420|gb|ABM28164.1| SNF2-related protein [Desulfovibrio vulgaris DP4] gi|311234232|gb|ADP87086.1| SNF2-related protein [Desulfovibrio vulgaris RCH1] Length = 1071 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 81/222 (36%), Gaps = 27/222 (12%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKALE 60 K + ++ D+ + + + +K Q+ D + K A + Sbjct: 852 RKLKEQVLADVDEKGLAKSQMSILDALLKLRQICCHPRLLKLDMPGFSTNLPSGKFDAFK 911 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKI 109 +I ++V F L ++ + G + D+ + N I Sbjct: 912 DMITDIVEEGHKVLVFSQFVQMLHIIRSWLQISGTPFCYLDGTSKDRFEQVDKFNNSPDI 971 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +E R + G R VF Y Sbjct: 972 PIFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VESQATDRTHRIGQTRQVFSYK 1025 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL------NALKKETIHV 205 LI QNT++E +L+ K + + ++ +L +E + + Sbjct: 1026 LICQNTVEEKILKLQDMKRGVAEAIIPGQETWKSLTREDLEM 1067 >gi|304439204|ref|ZP_07399122.1| SNF2 domain protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372336|gb|EFM25924.1| SNF2 domain protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 448 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 76/198 (38%), Positives = 123/198 (62%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +++L +++ ++I+A N+A+ + K LQ+A+G+V YDE K+ +H+ K+ ALE + Sbjct: 255 IYETLKKDLVVNIKDKDIDAVNAAALSNKLLQMASGSV-YDEYKNMIHIHNRKLDALEDL 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P+++AY + SDL R++ K +EWN+ KIP+ HPAS GHG Sbjct: 314 IEGANGKPVLIAYWYKSDLKRIK--DRFDVRELKTSEDFKEWNQSKIPVAVIHPASAGHG 371 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L++FSL W LE ++Q R+ + G K V +++++A+ TIDE V++ Sbjct: 372 LNLQAGGSTLIWFSLTWSLELYEQTNARL-----YRQGQKETVVIHHILAKGTIDEDVMK 426 Query: 183 RLRTKSTIQDLLLNALKK 200 L K+ Q L+ A+K Sbjct: 427 ALENKNKTQAALIEAVKA 444 >gi|302525636|ref|ZP_07277978.1| LOW QUALITY PROTEIN: SNF2/RAD54 family helicase [Streptomyces sp. AA4] gi|302434531|gb|EFL06347.1| LOW QUALITY PROTEIN: SNF2/RAD54 family helicase [Streptomyces sp. AA4] Length = 713 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 72/212 (33%), Gaps = 21/212 (9%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ + Q+ N +Y E K+ A Sbjct: 488 LYEAVVRENLAQIREAQGVQRRGQVLKLLTELKQICNHPAHYLKESAGVLSGRSGKLAAF 547 Query: 60 EVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 E +++ ++V + ++ + + + G Sbjct: 548 EELLDVILDEGESVLVFSQYVRLCRLLERRLAERGLPTALLSGEVGPKQRDEMVAAFQSG 607 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL ++ + WW+ +E R + G R V V Sbjct: 608 EVPVFLLSLKAGGVGLNLTQ-ATHVIHYDRWWNPA-----VEDQATDRAYRIGQDRPVQV 661 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + LIA+ T++E + L TK + D ++ A + Sbjct: 662 HRLIAEGTLEERIAAVLETKRGLADAVVGAGE 693 >gi|260579063|ref|ZP_05846962.1| SNF2 domain protein [Corynebacterium jeikeium ATCC 43734] gi|258602814|gb|EEW16092.1| SNF2 domain protein [Corynebacterium jeikeium ATCC 43734] Length = 453 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 89/197 (45%), Positives = 121/197 (61%), Gaps = 7/197 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + E+ DL G+ I+A N+A+ + K LQLA+GA+ YDE+ + VHD K+ ALE Sbjct: 254 KAYERLRDEMVLDLDGQVIDAANAAALSGKLLQLASGAI-YDEDGNTVVVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E AN P++VAY F DL R+ + FPQ R L I WN +IPL HPAS GH Sbjct: 313 LVEAANGQPLLVAYWFKHDLQRITERFPQARELT-TSTDIAAWNAREIPLALIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GGN+LV+FSL W LE +QQ R+ + G + V + +L A +T+DE VL Sbjct: 372 GLNLQQGGNLLVWFSLTWSLELYQQTNARL-----YRQGQDQPVTITHLAADHTLDEAVL 426 Query: 182 QRLRTKSTIQDLLLNAL 198 L K Q L+NA+ Sbjct: 427 AALDNKDMTQAALINAV 443 >gi|126660084|ref|ZP_01731204.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] gi|126618604|gb|EAZ89353.1| SWI/SNF family helicase [Cyanothece sp. CCY0110] Length = 1400 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 76/213 (35%), Gaps = 25/213 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 M Y +R+ L + + +K + + + + K+ Sbjct: 1180 MALYEALRRDSLEKLSESDDSGGQKHLQVLAALMKLRRCCCHPSLILD---YSSLKGSKL 1236 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEW 104 + + I+E+ N +V F L + + + ++ + Sbjct: 1237 QLFQEILEELLDNRHKALVFSQFVDHLQIVKSHLERQKISYQYLDGSTPKKERQRRVKAF 1296 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + + G GLNL + ++ WW+ +E R + G +R Sbjct: 1297 QSGEGDVFLISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQATDRAYRIGQQRP 1350 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L+A++TI+E ++Q K + D LL+ Sbjct: 1351 VTVYRLVAKDTIEEKIVQLHHRKRDLADSLLSG 1383 >gi|254452793|ref|ZP_05066230.1| helicase, Snf2 family [Octadecabacter antarcticus 238] gi|198267199|gb|EDY91469.1| helicase, Snf2 family [Octadecabacter antarcticus 238] Length = 970 Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 64/203 (31%), Gaps = 17/203 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 RE +G +K Q+ + K K L I+E Sbjct: 754 DARVREALAK-KGLAGSRITVLDALLKLRQVCCDPRLVKLDAAAKVKESAKFSRLMEIME 812 Query: 65 K--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 + + +++ F L ++ I ++ G + Sbjct: 813 ELMSEGRKVLIFSQFVEMLRLIESEVQSRGWSYAMLHGQTRDRSSEIDKFQSGDAQVFLI 872 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + ++ + WW+ +ER + R + G + VFVY L + Sbjct: 873 SLKAGGTGLNLTA-ADTVILYDPWWNPA-----VERQAMDRAHRIGQDKPVFVYRLYTEG 926 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 T++ + K + D L Sbjct: 927 TVESAIQNMQARKQALADALFEG 949 >gi|282534217|gb|ADA82325.1| putative helicase [Escherichia phage K1H] Length = 477 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 137/209 (65%), Gaps = 8/209 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-----KHWKEVHDEKI 56 + Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY K W++VHD K+ Sbjct: 267 QAYIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKDWEKVHDTKL 326 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ AP++VAY F +L R+ K FPQ + K ++ WN G+I +L Sbjct: 327 DALESIVEELQGAPLLVAYQFKHELERILKRFPQAQAFAKGAKGNKQMEAWNRGEIEILC 386 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A+ Sbjct: 387 VHPASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAK 446 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +T+DE+V R K ++Q+ LLN +K+ Sbjct: 447 DTLDEVVAARTDEKKSVQEELLNYMKRRG 475 >gi|168703233|ref|ZP_02735510.1| SNF2-related protein [Gemmata obscuriglobus UQM 2246] Length = 1098 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 80/228 (35%), Gaps = 32/228 (14%) Query: 2 KQYHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + + L G + ++ Q A D K K Sbjct: 876 QVYDELRDHYRASLLAHVDSVGLKRSQIQVLAALMRLRQAACHPGLID--KKRTGDASAK 933 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEW 104 + L +++ + +V F S L ++ + GRT D+D + Sbjct: 934 LDYLLPQLQELAESGQKALVFSQFTSLLDIVRKRLTAEGIQFEYLDGRTRDRDKRVERFQ 993 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + L + G GLNL + WW+ E + R + G + Sbjct: 994 TDPACKLFLVSLKAGGVGLNLTA-AEYVFLLDPWWNPAA-----EAQAIDRSYRIGQTKP 1047 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-------ALKKETIHV 205 VF Y LIA+ T++E VL+ ++K + D +L LK+E + + Sbjct: 1048 VFAYRLIARGTVEEKVLELQQSKRELADAILGGDGKGVTDLKREDLEL 1095 >gi|303248715|ref|ZP_07334968.1| SNF2-related protein [Desulfovibrio fructosovorans JJ] gi|302489880|gb|EFL49808.1| SNF2-related protein [Desulfovibrio fructosovorans JJ] Length = 1072 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 77/213 (36%), Gaps = 24/213 (11%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKALE 60 K + ++ + + + + +K Q+ D + K A + Sbjct: 853 KKLKEQVLATVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDLPGVNTNLPSGKFDAFK 912 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKI 109 +I ++V F L ++ + G + D+ + + I Sbjct: 913 DLITDCIEEGHKVLVFSQFVQMLHIIRSWVTISQIPFAYLDGSSKDRFDQVDRFNEDENI 972 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + ++ + WW+ +E R + G +R VF Y Sbjct: 973 KVFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VENQATDRTHRIGQQRQVFSYK 1026 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL---NALK 199 +I QNT++E +L+ K + + ++ +A K Sbjct: 1027 MICQNTVEEKILKLQEQKKDVAEAIIPGQDAFK 1059 >gi|227015822|gb|ACP17919.1| putative non-specific serine/threonine protein kinase [Pseudomonas nitroreducens] Length = 1093 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 82/219 (37%), Gaps = 24/219 (10%) Query: 3 QYH----KFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y R++ ++ + + + +K Q+ + H K+ Sbjct: 868 LYETVRLAMDRKVREEILQKGLASSQFVVLDALLKLRQVCCDPRLLQPDLPAT--HSGKL 925 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNE 106 AL ++++ A +++ F S LA +Q + ++ + Sbjct: 926 SALLEMLDELLAEGRRVLLFSQFTSMLALIQAQLQARNIPYALLTGETRDRRQPVDDFQQ 985 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++PL + G GLNL + ++ + WW+ Q R + G + VF Sbjct: 986 GRVPLFLISLKAGGTGLNLTT-ADTVIHYDPWWNPAVEQ-----QATDRAYRIGQDKPVF 1039 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VY LIA+ T++E + Q K+ + +L K + + Sbjct: 1040 VYKLIARGTLEEKIQQLQARKAALAAGVLEDGKNTGLQL 1078 >gi|326329299|ref|ZP_08195624.1| SNF2/helicase domain protein [Nocardioidaceae bacterium Broad-1] gi|325952874|gb|EGD44889.1| SNF2/helicase domain protein [Nocardioidaceae bacterium Broad-1] Length = 907 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 83/220 (37%), Gaps = 23/220 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIK 57 Y F R ++ + + S Q+ N + +E +KI+ Sbjct: 670 LYEAFVRNAMERIERLDADDPQRRGLVLSLLTGLKQICNHPAQFLKQEAGRITGRSQKIE 729 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN 105 L+ ++ + ++V + + L+ + G + + ++ + Sbjct: 730 LLDELVSTVLAESGAVLVFTQYVAMARLLEAHWAASGVAHQFLHGGTPVAERSRMVERFQ 789 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG++P+ + G GLNL + ++ WW+ +E R + G R V Sbjct: 790 EGEVPVFLLSLKAGGVGLNLTR-ADHVIHVDRWWNPA-----VEDQATDRAHRIGQTRTV 843 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ LI Q T++E V + L+ K + D +L A + + Sbjct: 844 QVHRLITQGTVEERVAELLQRKRVLADAVLGAGEAAFTEL 883 >gi|284031541|ref|YP_003381472.1| SNF2-like protein [Kribbella flavida DSM 17836] gi|283810834|gb|ADB32673.1| SNF2-related protein [Kribbella flavida DSM 17836] Length = 961 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 79/219 (36%), Gaps = 22/219 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKA 58 Y REL ++ + A Q+ N V Y + K++ Sbjct: 733 LYEATVRELMDAVRASDAMARRGLIVKLLTGLKQICNHPVQYLKEPAGAKLTGRSGKLEL 792 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE 106 L+ ++ ++V + L++ G + K ++ + Sbjct: 793 LDELLGTILAEDGAVLVFTQYVEMARLLERHLADRGVPTQLLHGGTPVRKREEMVERFQA 852 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+IP+ + G GLNL + +V + WW+ +E R + G R V Sbjct: 853 GEIPVFLLSLKAAGTGLNLTR-ADHVVHYDRWWNPA-----VEDQATDRAYRIGQIRPVQ 906 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ LIA+ TI++ + L K + D +L A + + Sbjct: 907 VHRLIAEGTIEDRIAAMLAGKRALADSVLTAGEAALTEL 945 >gi|282535269|gb|ADA82475.1| putative helicase [Escherichia phage K1ind3] gi|282547318|gb|ADA82375.1| putative helicase [Escherichia phage K1ind1] gi|282547370|gb|ADA82426.1| putative helicase [Escherichia phage K1ind2] Length = 474 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 137/209 (65%), Gaps = 8/209 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-----KHWKEVHDEKI 56 + Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY K W++VHD K+ Sbjct: 264 QAYIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKDWEKVHDTKL 323 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ AP++VAY F +L R+ K FPQ + K ++ WN G+I +L Sbjct: 324 DALESIVEELQGAPLLVAYQFKHELERILKRFPQAQAFAKGAKGNKQMEAWNRGEIEILC 383 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A+ Sbjct: 384 VHPASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAK 443 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +T+DE+V R K ++Q+ LLN +K+ Sbjct: 444 DTLDEVVAARTDEKKSVQEELLNYMKRRG 472 >gi|297569291|ref|YP_003690635.1| SNF2-related protein [Desulfurivibrio alkaliphilus AHT2] gi|296925206|gb|ADH86016.1| SNF2-related protein [Desulfurivibrio alkaliphilus AHT2] Length = 1309 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 22/212 (10%) Query: 3 QYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y +R+ L+ ++ +K + + E + Sbjct: 1089 LYEALRRQARATLKNGANRDRPGAPLQVLAEIMKLRRACCHPRLVLPDSTMPGAKLELLT 1148 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEG 107 + + + N I+V F LA +++ + + + ++++ G Sbjct: 1149 KVVAELLE-NRHRILVFSQFVDHLAIVRQYLDEQQISYQYFDGATPARVRQQRVRDFQAG 1207 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + L + G GLNL + ++ WW+ +E R + G + V + Sbjct: 1208 RGKLFLISLRAGGLGLNLTA-ADYVIHLDPWWNPA-----VEEQASDRAHRIGQDKPVTI 1261 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y LI TI+E +L + K + LL+A + Sbjct: 1262 YRLITTGTIEEKILAMHQQKRHLAAELLDATR 1293 >gi|227875061|ref|ZP_03993206.1| helicase [Mobiluncus mulieris ATCC 35243] gi|304390304|ref|ZP_07372257.1| SNF2 domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|306817348|ref|ZP_07451093.1| SNF2 domain protein [Mobiluncus mulieris ATCC 35239] gi|227844339|gb|EEJ54503.1| helicase [Mobiluncus mulieris ATCC 35243] gi|304326060|gb|EFL93305.1| SNF2 domain protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304649789|gb|EFM47069.1| SNF2 domain protein [Mobiluncus mulieris ATCC 35239] Length = 457 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 86/202 (42%), Positives = 118/202 (58%), Gaps = 7/202 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + +L DL G I+A N+A+ + K LQLA+GA+Y + W VHD K+ ALE Sbjct: 254 KIYEQLKADLVLDLDGATIDAANAAALSGKLLQLASGAIYTGD-GQWAPVHDRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + E AN +P++VAY F D R+ FPQ R K I+ WN G+I L HPAS GH Sbjct: 313 LYEAANGSPLLVAYWFTHDRKRITARFPQAR-ELKTSADIEAWNRGEIALGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG++LV+FSL W LE +QQ R+ + G V + L+A+ T+DE VL Sbjct: 372 GLNLQAGGHLLVWFSLTWSLELYQQTNARL-----YRQGQSEPVTITNLVAEGTLDETVL 426 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 + L K Q L++A+ E Sbjct: 427 KALDAKDATQAALIDAVAAEIT 448 >gi|256828244|ref|YP_003156972.1| Non-specific serine/threonine protein kinase [Desulfomicrobium baculatum DSM 4028] gi|256577420|gb|ACU88556.1| Non-specific serine/threonine protein kinase [Desulfomicrobium baculatum DSM 4028] Length = 1068 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 78/206 (37%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKALE 60 K + ++ D+ + I + +K Q+ D + K +A + Sbjct: 849 KKLKEQVLQDVDEKGIGQSQISILDALLKLRQICCHPRLLKLDMPGFNANLSSGKFEAFK 908 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKI 109 ++ + ++V F L ++ G + D+ + N +I Sbjct: 909 DLVTTIIDDGHKVLVFSQFVQMLHIIRNWLHMVEIPFCYLDGTSKDRFEQVDKFNNTPEI 968 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +E R + G R VF Y Sbjct: 969 PIFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VEDQATDRTHRIGQTRQVFAYK 1022 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 +I +NT++E +L+ +K I D ++ Sbjct: 1023 MICENTVEEKILKLQESKKGIADSII 1048 >gi|218885893|ref|YP_002435214.1| DEAD/DEAH box helicase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756847|gb|ACL07746.1| Non-specific serine/threonine protein kinase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 1069 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 82/222 (36%), Gaps = 27/222 (12%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKALE 60 K + ++ D+ + I + +K Q+ D + K A + Sbjct: 850 RKLKEQVMADVDEKGIAKSQMSILDALLKLRQICCHPRLLKLDMPGLTTNLPSGKFDAFK 909 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKI 109 +I ++V F L ++ + G + D+ + N +I Sbjct: 910 DMITDIVEEGHKVLVFSQFVQMLHIIRSWLQINAIPFCYLDGTSKDRFDQVDRFNNTPEI 969 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +E R + G R VF Y Sbjct: 970 PIFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VESQATDRTHRIGQTRQVFSYK 1023 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL------NALKKETIHV 205 LI +NT++E +L+ K + + ++ +L +E + + Sbjct: 1024 LICENTVEEKILKLQDMKRGVAEAIIPGQEAWKSLTREDLEM 1065 >gi|198283188|ref|YP_002219509.1| Non-specific serine/threonine protein kinase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667367|ref|YP_002425417.1| DNA helicase, SNF2/RAD54 family [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247709|gb|ACH83302.1| Non-specific serine/threonine protein kinase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519580|gb|ACK80166.1| DNA helicase, SNF2/RAD54 family [Acidithiobacillus ferrooxidans ATCC 23270] Length = 1113 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 74/210 (35%), Gaps = 18/210 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + ++E+ +G +K Q+ EK K K+ L +I Sbjct: 894 ERIRQEIAA--KGFQRSQIVILDAMLKLRQVCCDPRLLKSEKARKVQDSAKLALLMEMIP 951 Query: 65 K--ANAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 + A I++ F L + I + G++PL Sbjct: 952 ELLAEGRQILLFSQFTEMLALISARLDKMHIPYVLLTGSTQDRKTPIDRFQRGEVPLFLI 1011 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + ++ + WW+ E R + G KR VFVY LI Sbjct: 1012 SLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAHRIGQKRQVFVYKLIVAG 1065 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +I+E +L K+ + +L +KE + Sbjct: 1066 SIEEKILALQEKKAILAAGVLEKTQKEKLR 1095 >gi|291455081|ref|ZP_06594471.1| LOW QUALITY PROTEIN: SNF2/RAD54 family helicase [Streptomyces albus J1074] gi|291358030|gb|EFE84932.1| LOW QUALITY PROTEIN: SNF2/RAD54 family helicase [Streptomyces albus J1074] Length = 690 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 72/218 (33%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ A Q+ N + E E K+ L Sbjct: 464 LYEAVVRESMAAIERSEGIARRGLVLKLLTSLKQICNHPAQFLKESPARLEGRSGKLALL 523 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ +V + + + + + + EG Sbjct: 524 DELLDTLLAEDCSALVFTQYVGMAKLIGAHLAARAVPAELLHGATPVAERERMVDRFQEG 583 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+L + G GLNL + + + WW+ +E R + G R V V Sbjct: 584 RTPVLVLSLKAAGTGLNLTR-ASHVFHYDRWWNPA-----VEEQATDRAYRIGQTRPVQV 637 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LI + T+++ + + L K + D +L + + + Sbjct: 638 HRLITEGTVEDRIAELLTAKRALADAVLGSGEGALTEL 675 >gi|239983251|ref|ZP_04705775.1| SNF2/RAD54 family helicase [Streptomyces albus J1074] Length = 616 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 72/218 (33%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ A Q+ N + E E K+ L Sbjct: 390 LYEAVVRESMAAIERSEGIARRGLVLKLLTSLKQICNHPAQFLKESPARLEGRSGKLALL 449 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ +V + + + + + + EG Sbjct: 450 DELLDTLLAEDCSALVFTQYVGMAKLIGAHLAARAVPAELLHGATPVAERERMVDRFQEG 509 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+L + G GLNL + + + WW+ +E R + G R V V Sbjct: 510 RTPVLVLSLKAAGTGLNLTR-ASHVFHYDRWWNPA-----VEEQATDRAYRIGQTRPVQV 563 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LI + T+++ + + L K + D +L + + + Sbjct: 564 HRLITEGTVEDRIAELLTAKRALADAVLGSGEGALTEL 601 >gi|159028978|emb|CAO87439.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1390 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 25/213 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R L + A ++ +K + + ++ K+ Sbjct: 1171 YEALRRRALEKLSESDSTAGAKHLQVLAEIMKLRRACCHPQLVAPD---LDLAGSKLSRF 1227 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEG 107 I+++ N +V F L + ++ + G Sbjct: 1228 AEILDELLDNQHKALVFSQFVDHLAIVRSYLDQRQIKYQYLDGSTPASDRQKQVKAFQAG 1287 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL + ++ WW+ +E R + G KR V + Sbjct: 1288 EGDVFLISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQASDRAHRIGQKRPVTI 1341 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Y L+A++TI+E ++ K + D LL Sbjct: 1342 YRLVAKDTIEEKIVDLHHHKRDLADSLLEGTDA 1374 >gi|220904807|ref|YP_002480119.1| Non-specific serine/threonine protein kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869106|gb|ACL49441.1| Non-specific serine/threonine protein kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 1091 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 83/222 (37%), Gaps = 27/222 (12%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKALE 60 K + ++ D+ + + + +K Q+ D + K A + Sbjct: 872 RKLRAQVLADVDQKGLAKSQMSILDALLKLRQICCHPRLLKIDIPGFTTNLPSGKFDAFK 931 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKI 109 +I + ++V F L +++ + G + D+ + N I Sbjct: 932 DMIMEIVEGGHKVLVFSQFVQMLQIIKQWLEFSQVPFCYLDGASKDRFDQVDRFNNSPDI 991 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +E R + G R VF Y Sbjct: 992 PIFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VESQATDRTHRIGQTRQVFSYK 1045 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL------NALKKETIHV 205 LI QNT++E +L+ K + + ++ +L +E + + Sbjct: 1046 LICQNTVEEKILKLQEAKRGVAEAIIPGQDTWKSLTREDLEM 1087 >gi|308174984|ref|YP_003921689.1| SWI/SNF chromatin-remodeling complex subunit snf22 [Bacillus amyloliquefaciens DSM 7] gi|307607848|emb|CBI44219.1| SWI/SNF chromatin-remodeling complex subunit snf22 SWI/SNF complex subunit snf22; ATP-dependent helicase snf22 [Bacillus amyloliquefaciens DSM 7] Length = 451 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 80/198 (40%), Positives = 120/198 (60%), Gaps = 7/198 (3%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +++L ++ A +A + K LQLANGAV YDE +++HDEK+ ALE I+ Sbjct: 256 YKQLEKDLLLPFLDGDVVADTAAVLSNKLLQLANGAV-YDENGEIQKLHDEKLNALEDIV 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 + AN PI+V Y + DL R+Q+ F + + LD I +WN GKI +L AHPAS GHGL Sbjct: 315 DAANGKPILVFYSYKHDLERIQQKFKKAKPLDSSRE-IADWNNGKIEMLLAHPASTGHGL 373 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+++V+F + W LE +Q R + G K +V V +L+ + T+DE V++ Sbjct: 374 NLQDGGHVIVWFGMTWSLELYQ-----QANARLDRQGQKHSVIVNHLVTEGTVDEDVMRA 428 Query: 184 LRTKSTIQDLLLNALKKE 201 L K+ Q+ L+ A+K Sbjct: 429 LEGKAVGQNALMEAVKAR 446 >gi|212702386|ref|ZP_03310514.1| hypothetical protein DESPIG_00400 [Desulfovibrio piger ATCC 29098] gi|212674185|gb|EEB34668.1| hypothetical protein DESPIG_00400 [Desulfovibrio piger ATCC 29098] Length = 1085 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 82/222 (36%), Gaps = 27/222 (12%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDE--EKHWKEVHDEKIKALE 60 K + ++ D+ + + + +K Q+ + K A + Sbjct: 866 RKLRAQVLADVDEKGLAKSQMSILDALLKLRQICCHPRLLKIDLPGFSNNLPSGKFDAFK 925 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKI 109 ++ + ++V F L +++ + G + D+ + N I Sbjct: 926 DMVMEIVEGGHKVLVFSQFVQMLQIIRQWLEFSQIPFCYLDGASKDRFEQVDRFNNSPDI 985 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +E R + G R VF Y Sbjct: 986 PIFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VESQATDRTHRIGQTRQVFSYK 1039 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL------NALKKETIHV 205 LI QNT++E +L+ K + + ++ +L +E + + Sbjct: 1040 LICQNTVEEKILKLQEAKRGVAEAIIPGQDTWKSLTREDLEM 1081 >gi|62327356|ref|YP_224069.1| hypothetical protein BPKS7gp47 [Salmonella phage SS3e] gi|57472390|gb|AAW51252.1| hypothetical protein [Salmonella phage SS3e] Length = 474 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 137/209 (65%), Gaps = 8/209 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-----KHWKEVHDEKI 56 + Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY K W++VHD K+ Sbjct: 264 QAYIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKEWEKVHDTKL 323 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ AP++VAY F +L R+ K FPQ + K ++ WN G+I +L Sbjct: 324 DALESIVEELQGAPLLVAYQFKHELERILKRFPQAQAFSKGAKGNKQMESWNRGEIEILC 383 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A+ Sbjct: 384 VHPASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAK 443 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +T+DE+V R K ++Q+ LLN +K+ Sbjct: 444 DTLDEVVAARTDEKKSVQEELLNYMKRRG 472 >gi|262193501|ref|YP_003264710.1| SNF2-related protein [Haliangium ochraceum DSM 14365] gi|262076848|gb|ACY12817.1| SNF2-related protein [Haliangium ochraceum DSM 14365] Length = 777 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 68/211 (32%), Gaps = 22/211 (10%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + + D+ +G A +K Q+ + K Sbjct: 551 ELYESIRMSAHADVRSIIRKKGLAGSAIAILDALMKLRQVCCDPRLVTVPSARRVKESAK 610 Query: 56 IKALEVII--EKANAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWN 105 ++ ++ I+V F S L R + E+ Sbjct: 611 YALFFDLLSTQREQGRRILVFSQFTSMLALLSQGLEERGVAHSVLTGATANRQRAVDEFQ 670 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL + +V + WW+ R + G R V Sbjct: 671 EGRTEVFLISLKAGGTGLNLTR-ADTVVHYDPWWNPAAQ-----AQATDRAYRIGQTRPV 724 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY LI +++E +L + K + D +L Sbjct: 725 FVYNLITAGSVEERMLALQQRKRHLADTILG 755 >gi|220910355|ref|YP_002485666.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 7425] gi|219866966|gb|ACL47305.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 7425] Length = 1403 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 25/213 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 M Y +++ L + A ++ +K + A + + K+ Sbjct: 1179 MAFYEALRQQAITKLSESDATAGAKHLQVLAEIMKLRRACCNARLVMPDT---PLPSAKL 1235 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEW 104 + ++E+ AN +V F L + + + + Sbjct: 1236 QLFGEVLEELLANQHKALVFSQFVDHLQLIRAYLEEQKITYQYLDGSTPAAERKKRVDAF 1295 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + + G GLNL + ++ WW+ +E R + G R Sbjct: 1296 QAGQGDVFLISLKAGGTGLNLTA-ADYVIHMDPWWNPA-----VEDQASDRAHRIGQHRP 1349 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y L+A++TI+E ++ + K + D LL+ Sbjct: 1350 VTIYRLVAKHTIEEKIVDLHQHKRDLADSLLDG 1382 >gi|226360588|ref|YP_002778366.1| helicase [Rhodococcus opacus B4] gi|226239073|dbj|BAH49421.1| putative helicase [Rhodococcus opacus B4] Length = 934 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 21/209 (10%) Query: 3 QYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-KEVHDEKIKAL 59 Y RE + + S Q+ N Y ++H +KI L Sbjct: 702 LYEALVREAMERIATSEGIGRRGSIVSLLTGLKQICNHPAQYLGQEHAALTGRSQKIGLL 761 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +I+ +V HF + L++ G ++ ++ + G Sbjct: 762 DELIDTNLAEGGRSLVFTHFATMGRLLRRHLTTRGVTCEFLHGGTSVAAREELVERFQSG 821 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +P+L + G GLNL + +V F WW+ +E R + G V V Sbjct: 822 DVPVLILSLKAAGTGLNLTR-ADHVVHFDRWWNPA-----VEDQATDRAYRIGQTHPVVV 875 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + L+ TI+E + L +K + D +L+ Sbjct: 876 HRLVTAGTIEEHIAAMLASKRQLADSVLS 904 >gi|291455433|ref|ZP_06594823.1| SNF2/RAD54 family helicase [Streptomyces albus J1074] gi|291358382|gb|EFE85284.1| SNF2/RAD54 family helicase [Streptomyces albus J1074] Length = 958 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 74/218 (33%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE + Q+ N Y E++ K++ L Sbjct: 731 LYEAVVRETLAAVAAADGMERRGLIVQLLTSLKQICNHPAQYLKEDRPRVGGRSGKVELL 790 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ A +++ + L++ + ++ + +G Sbjct: 791 DELLDTILAEGAGVLLFTQYVRMGRLLERHLAARGVATQFLHGQTPIPAREEMVRRFQDG 850 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V WW+ +E R + G R V V Sbjct: 851 EVPVFLLSLKAAGTGLNLTR-AEHVVHVDRWWNPA-----VEAQATDRAYRIGQTRPVQV 904 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + ++ + TI++ + + L K + D +L + + Sbjct: 905 HRIVTEGTIEDRIAELLVRKQALADAVLTGGEAALTEL 942 >gi|239983620|ref|ZP_04706144.1| SNF2/RAD54 family helicase [Streptomyces albus J1074] Length = 956 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 74/218 (33%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE + Q+ N Y E++ K++ L Sbjct: 729 LYEAVVRETLAAVAAADGMERRGLIVQLLTSLKQICNHPAQYLKEDRPRVGGRSGKVELL 788 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ A +++ + L++ + ++ + +G Sbjct: 789 DELLDTILAEGAGVLLFTQYVRMGRLLERHLAARGVATQFLHGQTPIPAREEMVRRFQDG 848 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V WW+ +E R + G R V V Sbjct: 849 EVPVFLLSLKAAGTGLNLTR-AEHVVHVDRWWNPA-----VEAQATDRAYRIGQTRPVQV 902 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + ++ + TI++ + + L K + D +L + + Sbjct: 903 HRIVTEGTIEDRIAELLVRKQALADAVLTGGEAALTEL 940 >gi|78356607|ref|YP_388056.1| DEAD/DEAH box helicase-like [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219012|gb|ABB38361.1| DEAD/DEAH box helicase-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 1068 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 73/206 (35%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKALE 60 K + ++ D+ + I + +K Q+ D + K A + Sbjct: 849 KKLKDQVMADVDEKGIAKSQMSILDALLKLRQICCHPRLLKLDMPGLTTNLPSGKFDAFK 908 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTIQEWNE-GKI 109 +I ++V F L ++ T + +N+ I Sbjct: 909 DMITDIVEEGHKVLVFSQFVQMLHIIRSWLQINDMPFCYLDGTSKDRFDQVDRFNDSPDI 968 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +E R + G K VF Y Sbjct: 969 PIFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VENQATDRAHRIGQKNQVFAYK 1022 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 +I QNT++E +L+ K + D ++ Sbjct: 1023 MICQNTVEEKILKLQDMKRGVADAII 1048 >gi|238854134|ref|ZP_04644481.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] gi|238833210|gb|EEQ25500.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] Length = 450 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 119/198 (60%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +L QG+ I+A N+AS + K Q+ANG V YD+++ ++H K+ A+E + Sbjct: 253 IYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCV-YDDQQQVVQIHQRKLDAIEDL 311 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P+++AY F DLA++++ F K I +WN GKIPL HPAS GHG Sbjct: 312 VEAANGKPVLIAYWFKHDLAQIKQRFQ--VREIKTTQDINDWNAGKIPLALIHPASAGHG 369 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L+++ L W LE +QQ R+ + G ++ V +Y+LI + TIDE ++ Sbjct: 370 LNLQAGGSTLIWYGLTWSLELYQQTNARLW-----RQGQQQPVVIYHLITEGTIDENIMT 424 Query: 183 RLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 425 ALKQKDKTQLALINAVKA 442 >gi|298490375|ref|YP_003720552.1| SNF2-like protein ['Nostoc azollae' 0708] gi|298232293|gb|ADI63429.1| SNF2-related protein ['Nostoc azollae' 0708] Length = 1072 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 23/216 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + E +++ + +K Q+ N Y +E + + K++ L Sbjct: 836 QLYQQLVDESLVEIESAEGLQRRGMILALLIKLKQICNHPAQYLKESSLAKHNSAKLQRL 895 Query: 60 EVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNE 106 E ++E+ A ++ F L R + ++ I + Sbjct: 896 EEMLEEVLAEENRALIFTQFAEWGKLLKPYLEKQLGREILFLYGSTSKNQREEIIDRFQN 955 Query: 107 GK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++ + G GLNL N + F WW+ +E R + G + Sbjct: 956 DPQGPRIMILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATDRVFRIGQTKN 1009 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ + T++E + + +K + ++ A ++ Sbjct: 1010 VQVHKFVCTGTVEEKINDMIESKKQLAQQVVGAGEE 1045 >gi|253581729|ref|ZP_04858953.1| SNF2 domain-containing protein [Fusobacterium varium ATCC 27725] gi|251836078|gb|EES64615.1| SNF2 domain-containing protein [Fusobacterium varium ATCC 27725] Length = 459 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 78/205 (38%), Positives = 124/205 (60%), Gaps = 9/205 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK+Y + ++++ +L+ + I+ ++A+ + K +QLANGA+ YDE + EVH+ KI+A Sbjct: 255 MKEYEELEKKMILELEDKTIDVTSAAALSNKLMQLANGAI-YDENRGIHEVHNCKIEAFM 313 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE---WNEGKIPLLFAHPA 117 +IEK N +V Y+F DLARLQ+A + + T+++ WN+ +I +L HPA Sbjct: 314 ELIEKLNGKAALVFYNFQHDLARLQEALKKTGLKVRILKTVEDQDAWNKKEIDILLTHPA 373 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S +GLNLQ GGN +++F L W LE +Q R + G K V V++L+ Q+T D Sbjct: 374 SSAYGLNLQEGGNHVIWFGLNWSLELYQ-----QANKRLHRQGQKEKVIVHHLVVQDTRD 428 Query: 178 ELVLQRLRTKSTIQDLLLNALKKET 202 E V++ L TK +Q+ LL +LK Sbjct: 429 EDVIKALNTKGDVQEALLESLKVRI 453 >gi|116630100|ref|YP_815272.1| SNF2 family DNA/RNA helicase [Lactobacillus gasseri ATCC 33323] gi|116095682|gb|ABJ60834.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri ATCC 33323] Length = 450 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 119/198 (60%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +L QG+ I+A N+AS + K Q+ANG V YD+++ ++H K+ ALE + Sbjct: 253 IYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCV-YDDQQQVVQIHQRKLDALEDL 311 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P+++AY F DLA++++ F K I +WN GKIPL HPAS GHG Sbjct: 312 VEAANGKPVLIAYWFKHDLAQIKQRFQ--VREIKTTQDINDWNAGKIPLALIHPASAGHG 369 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ L+++ L W LE +QQ R+ + G ++ V +Y+LI + TIDE ++ Sbjct: 370 LNLQAGGSTLIWYGLTWSLELYQQTNARLW-----RQGQQQPVVIYHLITEGTIDENIMT 424 Query: 183 RLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 425 ALKQKDKTQLALINAVKA 442 >gi|309790429|ref|ZP_07684991.1| SNF2-related helicase [Oscillochloris trichoides DG6] gi|308227542|gb|EFO81208.1| SNF2-related helicase [Oscillochloris trichoides DG6] Length = 1032 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 71/218 (32%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN------SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y RE ++ E + K Q+ N ++ ++ K+ Sbjct: 800 LYEATVREALSEIADAESEEEQTRRRGLVLAMLTKLKQICNHPAHFLKDGSQLAERSGKL 859 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 L+ ++E+ ++ F L + G ++ Sbjct: 860 ARLDEMLEEVVAAEDRALIFTQFAEMGTLLQAHLSQRLGQEILFLHGGTPTRSRDGMVRR 919 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + P+ + G GLNL + + F WW+ +E R + G Sbjct: 920 FQAPEGPPIFILSLKAGGVGLNLTR-ASHVFHFDRWWNPA-----VEDQATDRSFRIGQT 973 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V V+ ++ T++E + + + K + +L A + Sbjct: 974 RNVQVHKFVSSGTLEEKIDEMIEGKRALAAQVLGAGEA 1011 >gi|293397496|ref|ZP_06641747.1| SNF2 family DNA helicase [Serratia odorifera DSM 4582] gi|291419984|gb|EFE93262.1| SNF2 family DNA helicase [Serratia odorifera DSM 4582] Length = 1224 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 72/206 (34%), Gaps = 23/206 (11%) Query: 4 YHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y +++ L G +I+ ++ + + + + K+ A Sbjct: 1005 YEALRQQAVERLDSGGGDIKPLQVLTEITRLRRFCCHPSLVLDN---LPLAGSKLAACLD 1061 Query: 62 IIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKI 109 II++ N +V F L + + + + + G+ Sbjct: 1062 IIDELRENHHKALVFSQFVDHLTLLRTALDERGIRYQYLDGSTSPTEREKRVAAFQSGEG 1121 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L + G GLNL + ++ WW+ +E R + G +R V VY Sbjct: 1122 ELFLISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQASDRAYRIGQERPVTVYR 1175 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 L+ ++TI+E ++ K + + LL Sbjct: 1176 LVMEDTIEEQMVALHGRKRQLAEDLL 1201 >gi|282533166|gb|ADA82275.1| putative helicase [Escherichia phage K1G] Length = 474 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 92/209 (44%), Positives = 137/209 (65%), Gaps = 8/209 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-----KHWKEVHDEKI 56 + Y + +L+ +L+ +EA N+A+KT KCLQ+A+GAVY K W++VHD K+ Sbjct: 264 QAYIDMEEKLFAELESGEVEAANAAAKTSKCLQIASGAVYVSGPDGEATKDWEKVHDMKL 323 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC---TIQEWNEGKIPLLF 113 ALE I+E+ AP++VAY F +L R+ K FPQ + K ++ WN G+I +L Sbjct: 324 DALESIVEELQGAPLLVAYQFKHELERILKRFPQAQAFAKGAKGNKQMEAWNRGEIEILC 383 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HPAS GHGLNLQ GG+ L F S W+LE + Q++ERIG RQ+QAG +R VF+Y+++A+ Sbjct: 384 VHPASAGHGLNLQDGGHHLAFISQGWNLEHYLQVVERIGPVRQKQAGHERPVFLYHIVAK 443 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +T+DE+V R K ++Q+ LLN +K+ Sbjct: 444 DTLDEVVAARTDEKKSVQEELLNYMKRRG 472 >gi|288799809|ref|ZP_06405268.1| SNF2 domain protein [Prevotella sp. oral taxon 299 str. F0039] gi|288333057|gb|EFC71536.1| SNF2 domain protein [Prevotella sp. oral taxon 299 str. F0039] Length = 458 Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 120/205 (58%), Gaps = 10/205 (4%) Query: 2 KQYHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y+KF+R+ +L + E I A ++A+ + K LQ + GA+Y ++ +H +K++A Sbjct: 256 KDYNKFERDCVLELFTEEDETITAASAAALSNKLLQFSGGAIYDEDHNTHV-IHTKKLEA 314 Query: 59 LEVIIEKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 LE ++E AN PI++ Y F + +R ++ P TI+ WN+G+I + AHPA Sbjct: 315 LEDVVEAANGQPILLFYAFKHEESRIIEHFKNLRVVKLDTPETIKAWNKGEIDIAIAHPA 374 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S GHGLNLQ+GGNI+V++ L W LE +Q R + G + V +Y+LI++ TID Sbjct: 375 SVGHGLNLQHGGNIIVWYGLTWSLELYQ-----QANARLHRQGQSKPVKIYHLISEGTID 429 Query: 178 ELVLQRLRTKSTIQDLLLNALKKET 202 E +++ L K Q+ L+ A+K Sbjct: 430 EEIVKALSNKDKTQNGLMQAVKARI 454 >gi|298528668|ref|ZP_07016072.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512320|gb|EFI36222.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] Length = 1387 Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 78/211 (36%), Gaps = 25/211 (11%) Query: 3 QYHKFQRELYCDLQG--ENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + +L+ E A N ++ + Q E V K+ Sbjct: 1165 MYEAMRMQALENLEQVSEQGGARNLRILTELTRLRQFCCHPRMVVPE---SRVPGSKLDL 1221 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNE 106 L+ II + AN +V F LA +++ + IQ + E Sbjct: 1222 LQEIITELLANKHKALVFSQFVKHLALVRERLEAMGIEYRYLDGSTPGHVREQEIQAFQE 1281 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ L + G GLNL + ++ WW+ +E R + G + V Sbjct: 1282 GRGDLFLISLKAGGLGLNLTA-ADYVIHLDPWWNPA-----VEDQATDRSHRIGQENPVT 1335 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+A+NTI+E +++ K + D LL Sbjct: 1336 VYRLVAENTIEEKIVRLHAEKRDLADSLLEG 1366 >gi|71279360|ref|YP_270079.1| Snf2 family protein [Colwellia psychrerythraea 34H] gi|71145100|gb|AAZ25573.1| Snf2 family protein [Colwellia psychrerythraea 34H] Length = 1134 Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 81/217 (37%), Gaps = 24/217 (11%) Query: 2 KQYHKFQ-------RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 + Y + +++ D +G +K Q+ N E K Sbjct: 907 ELYESVRLAMDSRLKDIIAD-KGLKRSQIEVLDALLKLRQVCNHPKLLKLEGAKKVNQSA 965 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEW 104 K+ L + + I++ F S L+ ++ + K + ++ Sbjct: 966 KLDYLMETLPEQIDEGRKILIFSQFTSMLSLIEDELIDAGIGYVKLTGSTTKRQEVVDKF 1025 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G++P+ + G GLNL + ++ F WW+ +E R + G + Sbjct: 1026 QRGEVPVFLISLRAGGVGLNLTA-ADTVIHFDPWWNPA-----VENQATDRAYRIGQNKP 1079 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VFVY LI +N+I+E + + + K+ + LL+ + Sbjct: 1080 VFVYKLIIENSIEEKIQKIQQNKAELAKALLSEEVSD 1116 >gi|300764700|ref|ZP_07074691.1| phage-associated helicase [Listeria monocytogenes FSL N1-017] gi|300514586|gb|EFK41642.1| phage-associated helicase [Listeria monocytogenes FSL N1-017] Length = 451 Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 119/200 (59%), Gaps = 8/200 (4%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y +F+ +L L+ I+A N+A + K LQ+ANGA+ YDE +HD+K+ ALE Sbjct: 255 QKYDEFKADLVLQLKEATIDAANTAVLSNKLLQMANGAI-YDEFNVSHHIHDQKLDALED 313 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE N PI++AY F DL R+++ F K I +WNEG IP+ HPAS GH Sbjct: 314 LIEGTNGKPILIAYWFQHDLERIKERFN--VRQIKTSQDIIDWNEGSIPIAVIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ LV+F L W LE + Q R+ + G V ++++IA++TIDE V+ Sbjct: 372 GLNLQAGGSTLVWFGLTWSLELYLQTNARLW-----RQGQSDTVVIHHIIAKDTIDEDVM 426 Query: 182 QRLRTKSTIQDLLLNALKKE 201 L+ K Q L++A+K Sbjct: 427 LALKRKDKTQSCLIDAVKAR 446 >gi|303327511|ref|ZP_07357952.1| Snf2 family protein [Desulfovibrio sp. 3_1_syn3] gi|302862451|gb|EFL85384.1| Snf2 family protein [Desulfovibrio sp. 3_1_syn3] Length = 1085 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 82/222 (36%), Gaps = 27/222 (12%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDE--EKHWKEVHDEKIKALE 60 K + ++ D+ + + + +K Q+ + K A + Sbjct: 866 RKLRAQVLADVDQKGLAKSQMSILDALLKLRQICCHPRLLKMDLPGFSNNLPSGKFDAFK 925 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKI 109 ++ + ++V F L +++ + G + D+ + N I Sbjct: 926 DMVLEIVEGGHKVLVFSQFVQMLQIIKQWLEFSQVPFCYLDGASKDRFDQVDRFNNSPDI 985 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +E R + G R VF Y Sbjct: 986 PIFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VESQATDRTHRIGQTRQVFSYK 1039 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL------NALKKETIHV 205 LI QNT++E +L+ K + + ++ +L +E + + Sbjct: 1040 LICQNTVEEKILKLQEAKRGVAEAIIPGQDTWKSLTREDLEM 1081 >gi|119510052|ref|ZP_01629192.1| SNF2-related helicase [Nodularia spumigena CCY9414] gi|119465239|gb|EAW46136.1| SNF2-related helicase [Nodularia spumigena CCY9414] Length = 1087 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 72/215 (33%), Gaps = 23/215 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + +++ + VK Q+ N Y + +E K++ L+ Sbjct: 852 LYQQVVEASLVEIESAEGLQRRGMILALLVKLKQICNHPAQYLKAATLQEHSSAKLQRLD 911 Query: 61 VIIEK--ANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 ++ ++ F L + G + + I + Sbjct: 912 EMLTVALEEGDRALIFTQFAEWGKLLKAHLQQTLGKEIFFLYGGSSKKQREEMIDRFQHD 971 Query: 108 K--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 P++ + G GLNL N + F WW+ +E R + G R V Sbjct: 972 PQGPPIMILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATDRVFRIGQTRNV 1025 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ + T++E + + +K + + ++ A ++ Sbjct: 1026 QVHKFVCTGTLEEKIHDMIESKKQLAEQVVGAGEE 1060 >gi|76788487|ref|YP_329361.1| prophage LambdaSa04, SNF2 family helicase [Streptococcus agalactiae A909] gi|76563544|gb|ABA46128.1| prophage LambdaSa04, helicase, SNF2 family [Streptococcus agalactiae A909] Length = 458 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 79/203 (38%), Positives = 118/203 (58%), Gaps = 9/203 (4%) Query: 4 YHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F+++ DL+ + A N+AS + K +Q+ANGAV Y +++ +HD+K+ ALE I Sbjct: 256 YSQFKKDYIMADLEDTEVTAANAASLSNKLVQMANGAV-YSDDQQVVSLHDQKLDALEDI 314 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAF---PQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IE AN P++VAY F DL R+++ T+ K I+EWN+G + + HPAS Sbjct: 315 IEAANGEPVLVAYWFKHDLKRIEERLAKLKVKGTVLKTEEDIREWNKGNVSVGLLHPASS 374 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+ LV+F L W LE +QQ R+ Q V + +++ + TIDE Sbjct: 375 GHGLNLQKGGHHLVWFGLTWSLELYQQTNARLWR----QGQQAETVVIQHIVTECTIDEE 430 Query: 180 VLQRLRTKSTIQDLLLNALKKET 202 +L+ L K Q LL A+K + Sbjct: 431 ILKVLENKDAQQARLLEAVKAQV 453 >gi|325687762|gb|EGD29783.1| SNF2 domain protein [Streptococcus sanguinis SK72] Length = 450 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 87/201 (43%), Positives = 130/201 (64%), Gaps = 7/201 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +F+ E+ L+G+ ++A NSAS + K LQ+ANG + YDE + +HD+K+ ALE Sbjct: 249 LAVYKEFKAEMVVSLKGQVLDAVNSASLSNKLLQMANG-MIYDENRDTVLLHDQKLVALE 307 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E N P++VAY F DL R+++ FP+ R + I+EWN+GKIPL HPAS G Sbjct: 308 EMVESMNGRPLLVAYWFQHDLKRIKERFPEARV-IQSNQDIEEWNKGKIPLGLIHPASSG 366 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ + +F L W LE +QQ+ R+ + G K V V+++I +NTIDE V Sbjct: 367 HGLNLQAGGHTICWFGLTWSLELYQQLNARLW-----RQGQKETVVVHHIITKNTIDEQV 421 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 ++RL+ K Q L++A+K E Sbjct: 422 MKRLKEKDISQQSLIDAVKYE 442 >gi|158341292|ref|YP_001522344.1| SNF2 family helicase [Acaryochloris marina MBIC11017] gi|158311533|gb|ABW33144.1| helicase, SNF2 family [Acaryochloris marina MBIC11017] Length = 1406 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 74/210 (35%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +++ L + + ++ ++ + E + K++ Sbjct: 1187 YEALRQDALAKLNESDAASGPKHIQVLAELMRLRRACCNPRLVLPETD---LPSAKLQLF 1243 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEG 107 ++ + N +V F L +++ + + + + + G Sbjct: 1244 AEVLNELLDNKHKALVFSQFVDHLEIIRRYLDEQQIQYQYLDGSTPAKNRHKRVDAFQAG 1303 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL + ++ WW+ +E R + G +R V + Sbjct: 1304 EGEIFLISLKAGGTGLNLTA-ADYVIHMDPWWNPA-----VEDQASDRAHRIGQQRPVTI 1357 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A+ TI+E +++ K + D LL Sbjct: 1358 YRLVAKGTIEEKIVELHNQKRDLADSLLEG 1387 >gi|289768102|ref|ZP_06527480.1| helicase [Streptomyces lividans TK24] gi|289698301|gb|EFD65730.1| helicase [Streptomyces lividans TK24] Length = 974 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 77/223 (34%), Gaps = 26/223 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV------HDE 54 Y RE ++ Q+ + + +E+H Sbjct: 743 LYEAVVRESMLAIEEAEGIGRRGLVLKLLTSLKQICDHPALFLKEEHPPGGTDRMTARSG 802 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 K+ L+ +++ ++V + + G + + + Sbjct: 803 KLALLDELLDTVLAEDGSVLVFTQYVGMARLITSHLAARAVPVDLLHGGTPVPERERMVD 862 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G P+L + G GLNL G+ +V F WW+ +E R + G Sbjct: 863 RFQSGATPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEEQATDRAYRIGQT 916 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V V+ LI + T+++ + + L++K + D +L + + + Sbjct: 917 QPVQVHRLITEGTVEDRIAEMLQSKRALADAILGSGESALTEL 959 >gi|256784218|ref|ZP_05522649.1| helicase [Streptomyces lividans TK24] Length = 979 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 77/223 (34%), Gaps = 26/223 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV------HDE 54 Y RE ++ Q+ + + +E+H Sbjct: 748 LYEAVVRESMLAIEEAEGIGRRGLVLKLLTSLKQICDHPALFLKEEHPPGGTDRMTARSG 807 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 K+ L+ +++ ++V + + G + + + Sbjct: 808 KLALLDELLDTVLAEDGSVLVFTQYVGMARLITSHLAARAVPVDLLHGGTPVPERERMVD 867 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G P+L + G GLNL G+ +V F WW+ +E R + G Sbjct: 868 RFQSGATPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEEQATDRAYRIGQT 921 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V V+ LI + T+++ + + L++K + D +L + + + Sbjct: 922 QPVQVHRLITEGTVEDRIAEMLQSKRALADAILGSGESALTEL 964 >gi|139438973|ref|ZP_01772433.1| Hypothetical protein COLAER_01439 [Collinsella aerofaciens ATCC 25986] gi|133775684|gb|EBA39504.1| Hypothetical protein COLAER_01439 [Collinsella aerofaciens ATCC 25986] Length = 1173 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 78/216 (36%), Gaps = 32/216 (14%) Query: 2 KQY--------HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD 53 K Y + Q + + + ++ K Q+ + E+ Sbjct: 948 KLYLANQDRIAQQVQHREVSEFKK---DKLKVLAELTKLRQICCDPHLHYEDYKA---GS 1001 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K+ A ++ I++ F L + K + + + + Sbjct: 1002 AKLDACMELVHGALDGGHHILLFSQFTGMLDIIGKRLAKEDIGFLKLTGASSKESRAKMV 1061 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ G++P+ + G GLNL ++++ + WW++ R + G Sbjct: 1062 AQFQAGEVPVFLISLKAGGVGLNLTA-ADVVIHYDPWWNVAAQD-----QATDRAHRIGQ 1115 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LIA++TI+E +++ +K + + +L Sbjct: 1116 QHTVTVYKLIAKDTIEERIMRMQESKRDLVNSVLGG 1151 >gi|21224583|ref|NP_630362.1| helicase [Streptomyces coelicolor A3(2)] gi|6273667|emb|CAB60181.1| putative helicase [Streptomyces coelicolor A3(2)] Length = 977 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 77/223 (34%), Gaps = 26/223 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV------HDE 54 Y RE ++ Q+ + + +E+H Sbjct: 746 LYEAVVRESMLAIEEAEGIGRRGLVLKLLTSLKQICDHPALFLKEEHPPGGTDRMTARSG 805 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 K+ L+ +++ ++V + + G + + + Sbjct: 806 KLALLDELLDTVLAEDGSVLVFTQYVGMARLITSHLAARAVPVDLLHGGTPVPERERMVD 865 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G P+L + G GLNL G+ +V F WW+ +E R + G Sbjct: 866 RFQSGATPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEEQATDRAYRIGQT 919 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V V+ LI + T+++ + + L++K + D +L + + + Sbjct: 920 QPVQVHRLITEGTVEDRIAEMLQSKRALADAILGSGESALTEL 962 >gi|260161780|emb|CAZ39324.1| phage related DNA helicase [Streptococcus suis] gi|313575362|emb|CBR26891.1| hypothetical protein [Streptococcus phage phi-SsUD.1] Length = 458 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 79/203 (38%), Positives = 117/203 (57%), Gaps = 9/203 (4%) Query: 4 YHKFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F++E +L G + A N+AS T K +QL+NGAV Y ++ +H++K+ ALE I Sbjct: 256 YIQFKKEYVLSELDGLEVTAANAASLTNKLVQLSNGAV-YSDDHTVVSLHEQKLDALEDI 314 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ---GRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +E AN PI+VAY F DLAR+ + + K I+EWN+G +P+ HPA Sbjct: 315 LESANGEPILVAYWFKHDLARIMSRLEKLKLKSQVLKTEEDIREWNKGNVPVGLLHPAGA 374 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+ LV+F L W LE +QQ R+ Q V + +++ + TIDE Sbjct: 375 GHGLNLQKGGHHLVWFGLTWSLELYQQTNARLWR----QGQESETVVIQHIVTEGTIDEE 430 Query: 180 VLQRLRTKSTIQDLLLNALKKET 202 +L+ L K Q+ L+ A+K + Sbjct: 431 ILKALENKDAQQERLIAAVKAQI 453 >gi|307323253|ref|ZP_07602463.1| SNF2-related protein [Streptomyces violaceusniger Tu 4113] gi|306890742|gb|EFN21718.1| SNF2-related protein [Streptomyces violaceusniger Tu 4113] Length = 978 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 83/218 (38%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE+ ++ G + Q+ N Y E++ K++ L Sbjct: 751 LYEAVVREILAEISGTGGLVRRGLIVKLLTGLKQICNHPAQYLKEDRPVIPGRSGKLELL 810 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ A ++V + L+ G + + ++ + +G Sbjct: 811 DELLDTILAEGASVLVFTQYVQMARILEGHLAARGVPTQLLHGGTPVARREEMVRSFQDG 870 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL G+ +V + WW+ +E R + G + V V Sbjct: 871 EVPVFLLSLKAAGTGLNLTRAGH-VVHYDRWWNPA-----VEAQATDRAYRIGQTQPVQV 924 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + +IA+ T+++ + L K + D +L + + + Sbjct: 925 HRIIAEGTVEDRIAAMLTRKQELADAVLGSGEGALTEL 962 >gi|146292471|ref|YP_001182895.1| SNF2-like protein [Shewanella putrefaciens CN-32] gi|145564161|gb|ABP75096.1| SNF2-related protein [Shewanella putrefaciens CN-32] Length = 1073 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 76/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +++L + + + + +K Q E+ K ++ K+ Sbjct: 851 LYESIRLVMEKKLRDLFANQGVNSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAKL 910 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNE 106 L+ + + +++ F S L ++ I + + Sbjct: 911 DWLKQNLPEMVQEGRKVLIFSQFTSMLTLIEAELQSLNIDYSKLTGQTRWRQAQIDRFQD 970 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ E+ R + G + VF Sbjct: 971 GDTPVFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----EKQATDRAHRIGQDKPVF 1024 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA+ T++E + + + K + D +L Sbjct: 1025 VYKLIAEGTVEEKIQEMQQHKQNLADSILEG 1055 >gi|320353039|ref|YP_004194378.1| SNF2-like protein [Desulfobulbus propionicus DSM 2032] gi|320121541|gb|ADW17087.1| SNF2-related protein [Desulfobulbus propionicus DSM 2032] Length = 1447 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 70/210 (33%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +++ + E ++ + Q + K+ Sbjct: 1228 YEALRQQALERIDAEQGTNGQKPMRILAEITRLRQACCHPRLLQ---ADSTIAGAKLALF 1284 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 ++ + N +V F LA + + ++ + G Sbjct: 1285 GEVVAELLDNGHKALVFSQFVGHLALIREYLDARAIPYRYLDGSTPPKERQREVEAFQAG 1344 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + L + G GLNL + ++ WW+ +E R + G +R V V Sbjct: 1345 QGDLFLISLKAGGLGLNLTA-ADYVIHMDPWWNPA-----VEDQASDRAHRIGQQRPVTV 1398 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+AQ TI+E +++ K + D LL+A Sbjct: 1399 YRLVAQQTIEEKIVRLHAEKRDLADSLLDA 1428 >gi|319425773|gb|ADV53847.1| SNF2-related protein [Shewanella putrefaciens 200] Length = 1073 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 76/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +++L + + + + +K Q E+ K ++ K+ Sbjct: 851 LYESIRLVMEKKLRDLFANQGVNSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAKL 910 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNE 106 L+ + + +++ F S L ++ I + + Sbjct: 911 DWLKQNLPEMVQEGRKVLIFSQFTSMLTLIEAELQSLNIDYSKLTGQTRWRQAQIDRFQD 970 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ E+ R + G + VF Sbjct: 971 GDTPVFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----EKQATDRAHRIGQDKPVF 1024 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA+ T++E + + + K + D +L Sbjct: 1025 VYKLIAEGTVEEKIQEMQQHKQNLADSILEG 1055 >gi|83591548|ref|YP_425300.1| SNF2 helicase-like protein [Rhodospirillum rubrum ATCC 11170] gi|83574462|gb|ABC21013.1| SNF2 helicase-related protein [Rhodospirillum rubrum ATCC 11170] Length = 1209 Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 70/212 (33%), Gaps = 25/212 (11%) Query: 3 QYHKFQ-------RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 Y + RE+ + +G + + + Q+ K K Sbjct: 985 LYEAVRLAAHKAIREVLAE-KGLARGRIHILAALTRLRQVCCDPRLVK-GGPRKPPPSAK 1042 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWN 105 + LE ++ +V F S LA ++ + + Sbjct: 1043 LDRLEEMLRDLVDEGRRTLVFSAFPSMLALVEERLAAASIPWVSLTGETRDRDTPVTRFQ 1102 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G +P+ + G GL L + ++ + WW+ +E R + G + V Sbjct: 1103 SGAVPVFLISLKAGGTGLTLTA-ADTVIHYDPWWNPA-----VEAQATDRAHRIGQDKPV 1156 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 FV+ L+A T++E +L K + D L + Sbjct: 1157 FVHKLVAAGTVEERILALQDRKRGLLDGLFDG 1188 >gi|298346380|ref|YP_003719067.1| helicase [Mobiluncus curtisii ATCC 43063] gi|298236441|gb|ADI67573.1| helicase [Mobiluncus curtisii ATCC 43063] Length = 452 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 7/199 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + E+ +L E I+A N+A K QLA+GA+ Y E VH K+ ALE Sbjct: 254 KVYDRLAAEMVVELGDEVIDAANAAVLAGKLTQLASGAI-YTEAGDSIVVHGRKLDALED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY + DLAR+++ FPQ R K I+ WN G+IPL HPAS GH Sbjct: 313 LIEAANGNPVLVAYWWQHDLARIRERFPQAR-QLKTSADIEAWNGGEIPLGLIHPASAGH 371 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+IL+++SL W LE HQQ R+ + G + V + ++ +++ID+ +L Sbjct: 372 GLNLQQGGSILIWYSLTWSLELHQQTNARL-----YRQGQTKPVTITHIATKDSIDQQIL 426 Query: 182 QRLRTKSTIQDLLLNALKK 200 + L +K+ Q L++A+ + Sbjct: 427 RALESKNMTQSALIDAVAQ 445 >gi|328887305|emb|CCA60544.1| Helicase, SNF2 or RAD54 family [Streptomyces venezuelae ATCC 10712] Length = 1036 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 73/209 (34%), Gaps = 21/209 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE + A Q+ N Y EE+ E K++ L Sbjct: 806 LYEAVVRETLAAIADAEGMARRGLVVKLLTGLKQICNHPAQYLKEERPRIEGRSGKLELL 865 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ A +V + L+ G + + + + G Sbjct: 866 DELLDTILAEGACTLVFTQYVGMARLLKTHLAARGVRTQFLHGGTPVAEREAMVARFQSG 925 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V + WW+ +E R + G R V V Sbjct: 926 EVPVFLLSLKAAGTGLNLTR-AEHVVHYDRWWNPA-----VEAQATDRAYRIGQDRPVQV 979 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + LIA+ TI++ + L K + D +L Sbjct: 980 HRLIAEGTIEDRIATMLDRKRELADTVLG 1008 >gi|296122550|ref|YP_003630328.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] gi|296014890|gb|ADG68129.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] Length = 1112 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 78/221 (35%), Gaps = 25/221 (11%) Query: 2 KQYHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + + L G + ++ Q + + + K Sbjct: 890 RLYDELRDHFRDSLLGLIESQGLAKTKMHVLEALLRLRQASCHPALLHKSSDEEG--SAK 947 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEW 104 + L +E+ +V F S LA ++K + G+T D+ C + Sbjct: 948 LDVLIPHLEELVGEGHKTLVFSQFTSMLAIVRKHLDRAGITYEYLDGQTRDRKECVERFQ 1007 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + + G GLNL + + WW+ +E + R + G R Sbjct: 1008 NDKDCGVFLISLKAGGLGLNLTA-ADYVFILDPWWNPA-----VETQAIDRAHRVGQTRQ 1061 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF Y LI +NT++E + + + K + D +L ++ Sbjct: 1062 VFAYRLICKNTVEEKIAELQKQKRELADAILEQDNSVMTNL 1102 >gi|256789242|ref|ZP_05527673.1| helicase [Streptomyces lividans TK24] Length = 887 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 81/218 (37%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N + E++ K++ L Sbjct: 660 LYEAVVREALAEIAGADHMARRGMIVKLLTNLKQICNHPAQFLKEDRPKITGRSGKLELL 719 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L++ G ++ ++ + +G Sbjct: 720 DELLDTILSEQASVLVFTQYVQMARLLEQHLAARGVSSLFLHGGTSVTARESLVRRFQDG 779 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL +V + WW+ +E R + G R V V Sbjct: 780 DAPVFLLSLKAAGTGLNLTR-AEHVVHYDRWWNPA-----VEAQATDRAYRIGQTRPVQV 833 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ TI++ + L K + D +L + + + Sbjct: 834 HRLIAEGTIEDRIAALLNCKRELADAVLGSGEAALTEL 871 >gi|289773131|ref|ZP_06532509.1| helicase [Streptomyces lividans TK24] gi|289703330|gb|EFD70759.1| helicase [Streptomyces lividans TK24] Length = 988 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 81/218 (37%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE ++ G + A Q+ N + E++ K++ L Sbjct: 761 LYEAVVREALAEIAGADHMARRGMIVKLLTNLKQICNHPAQFLKEDRPKITGRSGKLELL 820 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ + A ++V + L++ G ++ ++ + +G Sbjct: 821 DELLDTILSEQASVLVFTQYVQMARLLEQHLAARGVSSLFLHGGTSVTARESLVRRFQDG 880 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL +V + WW+ +E R + G R V V Sbjct: 881 DAPVFLLSLKAAGTGLNLTR-AEHVVHYDRWWNPA-----VEAQATDRAYRIGQTRPVQV 934 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ TI++ + L K + D +L + + + Sbjct: 935 HRLIAEGTIEDRIAALLNCKRELADAVLGSGEAALTEL 972 >gi|17232392|ref|NP_488940.1| SWI/SNF family helicase [Nostoc sp. PCC 7120] gi|17134038|dbj|BAB76599.1| SWI/SNF family helicase [Nostoc sp. PCC 7120] Length = 869 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 77/210 (36%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L N EA N ++ +K + + E+ K++ Sbjct: 650 YEALRRQAISKLSDSNAEAGNKHLQVLAEIMKLRRACCNPSLVMPDT---ELSSSKLQLF 706 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 ++ + N +V F L ++ + ++ + + + G Sbjct: 707 GEVLGELLENRHKALVFSQFVDHLHIIRNYLDKQGINYQYLDGSTSVSERKKRVDAFQAG 766 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + ++ WW+ +E R + G +R V + Sbjct: 767 NGDVFLISLKAGGTGLNLTA-ADYVIHTDPWWNPA-----VEDQASDRAHRIGQQRPVTI 820 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI+E +++ K + D LL Sbjct: 821 YRLVAKDTIEEKIVELHHHKRDLADSLLEG 850 >gi|302533833|ref|ZP_07286175.1| SNF2/RAD54 family helicase [Streptomyces sp. C] gi|302442728|gb|EFL14544.1| SNF2/RAD54 family helicase [Streptomyces sp. C] Length = 645 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 79/229 (34%), Gaps = 32/229 (13%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVH------- 52 Y E ++G Q+ N + E + V Sbjct: 408 LYQAAVDEAMAVIEGSEGMERRGMIMKLLASLKQICNHPAQFLKEYGLREGVPAGAAAPR 467 Query: 53 ----DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDK 96 K+ L+ +++ ++V + + L++ G + + Sbjct: 468 LAHRSGKLALLDELLDTILAEDGSVLVFTQYVTMARILERHLASRGIPSQLLHGGTPVPR 527 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + G++P+ + G GLNL G+ ++ + WW+ +E R Sbjct: 528 REELVDRFQSGEVPVFLLSLKAAGTGLNLTRAGH-VIHYDRWWNPA-----VEEQATDRA 581 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G + V V+ +IA+ T+++ + + L K + D +L + + + Sbjct: 582 YRIGQTQPVQVHRIIAEGTVEDRIAELLEAKRALADAVLGSGEAALTEL 630 >gi|317122409|ref|YP_004102412.1| SNF2-related protein [Thermaerobacter marianensis DSM 12885] gi|315592389|gb|ADU51685.1| SNF2-related protein [Thermaerobacter marianensis DSM 12885] Length = 1191 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 23/210 (10%) Query: 2 KQYHKF----QRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + + ++ I ++ Q + ++ K Sbjct: 967 KLYRELLAAYRARVLAEVDRAGIARSRMTILEALLRLRQACCHPALL-DLPGYRNAGSAK 1025 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------PCTIQEWN 105 ++A ++ ++V F S L LQ+ + + ++ + Sbjct: 1026 LEAFRELVHHVAGGGGKVLVFSQFTSMLDILQRELDRLGLGWERLDGRVRNREERVRRFQ 1085 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG +P+ + G GLNL + ++ + WW+ +E R + G R V Sbjct: 1086 EGDVPVFLISLKAGGTGLNLTA-ASYVIHYDPWWNPA-----VEEQATGRAHRIGQDRPV 1139 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 F Y LI + T++E +LQ K + LL Sbjct: 1140 FSYKLITRGTVEEKILQLQEQKRALAGALL 1169 >gi|120599532|ref|YP_964106.1| SNF2-like protein [Shewanella sp. W3-18-1] gi|120559625|gb|ABM25552.1| SNF2-related protein [Shewanella sp. W3-18-1] Length = 1073 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 76/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +++L + + + + +K Q E+ K ++ K+ Sbjct: 851 LYESIRLVMEKKLRDLFANQGVNSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAKL 910 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNE 106 L+ + + +++ F S L ++ I + + Sbjct: 911 DWLKQNLPEMVQEGRKVLIFSQFTSMLTLIEAELQSLNIDYSKLTGQTRWRQAQIDRFQD 970 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ E+ R + G + VF Sbjct: 971 GDTPVFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----EKQATDRAHRIGQDKPVF 1024 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA+ T++E + + + K + D +L Sbjct: 1025 VYKLIAEGTVEEKIQEMQQHKQNLADSILEG 1055 >gi|162451262|ref|YP_001613629.1| hypothetical protein sce2990 [Sorangium cellulosum 'So ce 56'] gi|161161844|emb|CAN93149.1| hypothetical protein sce2990 [Sorangium cellulosum 'So ce 56'] Length = 1141 Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + RE+ + GE + + Q A + + + K+ Sbjct: 916 LYLQVAREVRAQVLGEVERVGLAKSQLQILAGLTRLRQAACDPRLLGLPREFGDDDSGKL 975 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWN 105 A+ +I ++V F L ++ + G T D+ + N Sbjct: 976 VAVRELIANAVEGGHKVLVFSQFVMMLRLIEKAMKEDGVAYEYLDGSTKDRAERVERFQN 1035 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +P+ + G GLNL + ++ F WW+ Q R + G + V Sbjct: 1036 DPSVPVFLISLKAGGTGLNLTA-ADTVIHFDPWWNPAVEQ-----QATDRAHRIGQTKVV 1089 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LIA+ TI+E +L K + +L+ Sbjct: 1090 TAYRLIAEGTIEEKILLLKDKKRQLVASVLSE 1121 >gi|317484825|ref|ZP_07943719.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316923919|gb|EFV45111.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 1073 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 83/223 (37%), Gaps = 28/223 (12%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVY---YDEEKHWKEVHDEKIKAL 59 K + ++ D++ + + + +K Q+ + K +A Sbjct: 853 RKLRDQVLADVESKGMAKSQMSILDALLKLRQICCHPRLLKVDMPGFSTGSLPSGKFEAF 912 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGK 108 + +I ++V F L ++ + G + D+ + N + Sbjct: 913 KDMIFDVVEGGHKVLVFSQFVQMLQIIRGWLQLTDIPFCYLDGTSKDRLDQVDRFNNSPE 972 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IP+ + G G+NL + ++ + WW+ +E R + G R VF Y Sbjct: 973 IPIFLISLKAGGTGINLTS-ADYVIHYDPWWNPA-----VESQATDRTHRIGQTRQVFSY 1026 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL------NALKKETIHV 205 LI QNT++E +L+ K + + ++ +L KE + + Sbjct: 1027 KLICQNTVEEKILKLQEMKRGVAEAVIPGQDTWKSLTKEDLEM 1069 >gi|300909415|ref|ZP_07126876.1| SNF2 domain protein [Lactobacillus reuteri SD2112] gi|300893280|gb|EFK86639.1| SNF2 domain protein [Lactobacillus reuteri SD2112] Length = 451 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 117/198 (59%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +L QG+ I+A N+AS + K Q+ANG V YD+++ ++H K+ ALE + Sbjct: 254 IYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCV-YDDQQQIVQIHQRKLDALEDL 312 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P++VAY F DL +++ K P IQ+WN GKIPL HPAS GHG Sbjct: 313 VEAANGKPVLVAYWFKHDLIQIK--SRFKVREIKTPRDIQDWNAGKIPLALIHPASAGHG 370 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L Sbjct: 371 LNLQAGGATLIWYGLTWSLELYQQTNARLW-----RQGQRQPVVIHHIITEGTIDENILA 425 Query: 183 RLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 426 ALKRKDKTQLALINAVKA 443 >gi|226943915|ref|YP_002798988.1| DEAD box and SNF-like helicase domain-containing protein [Azotobacter vinelandii DJ] gi|226718842|gb|ACO78013.1| DEAD box and SNF-like helicase domain-containing protein [Azotobacter vinelandii DJ] Length = 1357 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 76/212 (35%), Gaps = 24/212 (11%) Query: 3 QYHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +++ + E ++ ++ + + + + K+ A Sbjct: 1138 LYEAMRQQALESISQSGEEGSQSLRVLTEITRLRRFCCHPSLVLPDSD---LPGSKLAAF 1194 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 I+E+ + +V F L+ ++K + + ++ + G Sbjct: 1195 AEIVEELLDSRHKALVFSQFVDHLSIVRKWLEERGIRYQYLDGATPAKERMARVEAFQGG 1254 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + ++ WW+ +E R + G +R V + Sbjct: 1255 DGDIFLISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQASDRAHRMGQQRPVTI 1308 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y L+A+NTI+E +L K + D LL + Sbjct: 1309 YRLVAENTIEERILALHGQKRDLADSLLEGGE 1340 >gi|298528450|ref|ZP_07015854.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512102|gb|EFI36004.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] Length = 1068 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 74/206 (35%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKALE 60 K + ++ + + I A + +K Q+ + + K +A + Sbjct: 849 KKLKEQVLQRVDEKGISASQMSILDALLKLRQICCHPRLLRLNMPGLNNNIPSGKFEAFK 908 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKI 109 + + ++V F L ++ G + D+ N I Sbjct: 909 DLTTNIIEDGHKVLVFSQFVQMLHIIRSWLNMNEIPHAYLDGSSKDRLEQVDLFNNNPDI 968 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +E R + G + VF Y Sbjct: 969 PVFLISLKAGGTGLNLTA-ADYVIHYDPWWNPA-----VENQATDRTHRIGQTKQVFSYK 1022 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 +I +NT++E +L+ K + + ++ Sbjct: 1023 MICENTVEEKILKLQEQKKGVAEAVI 1048 >gi|308535304|ref|YP_002139277.2| helicase [Geobacter bemidjiensis Bem] gi|308052649|gb|ACH39481.2| helicase, putative [Geobacter bemidjiensis Bem] Length = 1386 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 27/213 (12%) Query: 3 QYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++ +L +G+ ++ ++ + + + K+ Sbjct: 1165 LYEAIRKSALDNLAGVGKVEGKGELHLKILAEIMRLRRACCNPRLVLPDT---PIPSTKL 1221 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEW 104 A I+E+ N +V F L + + + + Sbjct: 1222 AAFGEIVEELRENRHKALVFSQFVGHLELIRQYVEKNGIPYQYLDGSTPPQERKKRVDAF 1281 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G L + G GLNL + ++ WW+ +E R + G +R Sbjct: 1282 QSGSGDLFLISLKAGGVGLNLTA-ADYVIHMDPWWNPA-----VEDQASDRAHRIGQQRP 1335 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y L+ + TI+E ++ + K + D LL+ Sbjct: 1336 VTIYRLVTRGTIEEKIVGLHQQKRGLADSLLDE 1368 >gi|94271432|ref|ZP_01291955.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93450447|gb|EAT01631.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 940 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 70/208 (33%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELY--CDLQGENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y +R+ + Q E S +K + E H+ K + Sbjct: 724 LYEALRRQALRNLEQQDEQRAPLKILSAIMKLRRACCHPRLVLPESDLPCAKHELFSKVV 783 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEGKI 109 ++ N I+V F L +++ + ++++ G Sbjct: 784 SELL--ENGHRILVFSQFVDHLTLIRQLLDNQGIGYQYLDGSTPPAVRQRRVEDFQRGGK 841 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L + G GLNL G + ++ WW+ Q R + G R V VY Sbjct: 842 DLFLISLRAGGLGLNLT-GADYVIHLDPWWNPAVEQ-----QASDRAHRIGQDRPVTVYR 895 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI NTI+E +L + K + LL+ Sbjct: 896 LITSNTIEEKILSLHQRKRNLAGDLLDG 923 >gi|302879469|ref|YP_003848033.1| SNF2-related protein [Gallionella capsiferriformans ES-2] gi|302582258|gb|ADL56269.1| SNF2-related protein [Gallionella capsiferriformans ES-2] Length = 1100 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 73/203 (35%), Gaps = 17/203 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + RE + +G +K Q+ K K+ L ++ Sbjct: 879 DQRVREEIAE-KGFARSHIIILDALLKLRQVCCDPRLLKLTSAKKVKEHAKLDLLMEMLP 937 Query: 65 K--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 + + I+V F S L ++ ++++ +G++P+ Sbjct: 938 ELVSEGRRILVFSQFTSMLELIEGELTKEKLTYVKLTGDTQNREEVVRQFQDGEVPIFLI 997 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + ++ + WW+ +E R + G + VFVY L+ Sbjct: 998 SLKAGGVGLNLTS-ADTVIHYDPWWNPA-----VENQATDRAHRLGQTKNVFVYKLVVAG 1051 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 +I+E +L K+ + +L+ Sbjct: 1052 SIEEKILALQEKKAELAAGILSE 1074 >gi|94264348|ref|ZP_01288140.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93455242|gb|EAT05455.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 1285 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 70/208 (33%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELY--CDLQGENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y +R+ + Q E S +K + E H+ K + Sbjct: 1069 LYEALRRQALRNLEQQDEQRAPLKILSAIMKLRRACCHPRLVLPESNLPCAKHELFSKVV 1128 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEGKI 109 ++ N I+V F L +++ + ++++ G Sbjct: 1129 SELL--ENGHRILVFSQFVDHLTLIRQLLDNQGIGYQYLDGSTPPAVRQRRVEDFQRGGK 1186 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L + G GLNL G + ++ WW+ Q R + G R V VY Sbjct: 1187 DLFLISLRAGGLGLNLT-GADYVIHLDPWWNPAVEQ-----QASDRAHRIGQDRPVTVYR 1240 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI NTI+E +L + K + LL+ Sbjct: 1241 LITSNTIEEKILSLHQRKRNLAGDLLDG 1268 >gi|304310231|ref|YP_003809829.1| predicted helicase [gamma proteobacterium HdN1] gi|301795964|emb|CBL44165.1| predicted helicase [gamma proteobacterium HdN1] Length = 990 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 72/212 (33%), Gaps = 23/212 (10%) Query: 4 YHKF----QREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y QRE+ G + ++ QL + K + K+ Sbjct: 751 YDALHALTQREITDLLLADGHETTRISILDALLRLRQLCCDPRLL-PLEDAKSLPSAKLD 809 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEG 107 L V++E+ I+V F S L R ++ + Sbjct: 810 HLLVMLEELVEEGRRILVFSQFTSMLALIREALQQRKIPHLLLTGATQNRQALVERFQAE 869 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + ++ F WW+ E R + G + VFV Sbjct: 870 NEPIFLISLKAGGVGLNLTA-ADTVIHFDPWWNPAA-----EEQATDRAYRIGQDKPVFV 923 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y LI + TI+E ++ K +QD + A + Sbjct: 924 YKLICEGTIEEKIVLLQERKRALQDAITGAAE 955 >gi|294812014|ref|ZP_06770657.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|326440261|ref|ZP_08214995.1| helicase [Streptomyces clavuligerus ATCC 27064] gi|294324613|gb|EFG06256.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 986 Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 74/227 (32%), Gaps = 36/227 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY----------------DE 44 Y RE ++G A Q+ N + Sbjct: 745 LYEAAVREAMAAIEGAEGMARRGMVMKLLTDLKQICNHPAQFLKEPGRTGPGHRGSPGRG 804 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGR 92 K+ L+ ++E +++ + + L + G Sbjct: 805 PGTRLAGRSGKLALLDELLETILAEEGAVLIFTQYVTMARLLLEHLSARSVPAQLLHGGT 864 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + + G+IP+ + G GLNL G+ ++ + WW+ +E Sbjct: 865 PVAERQRMVDRFQSGEIPVFVLSLKAAGTGLNLTRAGH-VIHYDRWWNPA-----VEEQA 918 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G R V V+ LI + T+++ + L K + D +L + + Sbjct: 919 TDRAYRIGQTRPVQVHRLITEGTVEDRIAGMLAAKRALADAVLGSGE 965 >gi|254391562|ref|ZP_05006762.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|197705249|gb|EDY51061.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 754 Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 74/227 (32%), Gaps = 36/227 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY----------------DE 44 Y RE ++G A Q+ N + Sbjct: 513 LYEAAVREAMAAIEGAEGMARRGMVMKLLTDLKQICNHPAQFLKEPGRTGPGHRGSPGRG 572 Query: 45 EKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGR 92 K+ L+ ++E +++ + + L + G Sbjct: 573 PGTRLAGRSGKLALLDELLETILAEEGAVLIFTQYVTMARLLLEHLSARSVPAQLLHGGT 632 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + + G+IP+ + G GLNL G+ ++ + WW+ +E Sbjct: 633 PVAERQRMVDRFQSGEIPVFVLSLKAAGTGLNLTRAGH-VIHYDRWWNPA-----VEEQA 686 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G R V V+ LI + T+++ + L K + D +L + + Sbjct: 687 TDRAYRIGQTRPVQVHRLITEGTVEDRIAGMLAAKRALADAVLGSGE 733 >gi|225593133|gb|ACN96051.1| SNF2-related helicase [Fischerella sp. MV11] Length = 828 Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 76/217 (35%), Gaps = 24/217 (11%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKA 58 + Y K E +++ + VK Q+ N Y ++ E H K+ Sbjct: 591 ELYQKVVEESLAEIETAEGMQRRGMILALLVKLKQVCNHPAQYLKKTTLSEPHLSGKLLR 650 Query: 59 LEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 L+ ++E+ + ++ F L R + + I + Sbjct: 651 LQEMLEEVLSEGDRALIFTQFAEWGKLLKPYLEQKLGREIFFLYGSTSKKQREEMIDRFQ 710 Query: 106 EGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 P++ + G GLNL N + F WW+ +E R + G R Sbjct: 711 HDPQGPPIMILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATDRVFRIGQTR 764 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ + T++E + + +K + + ++ A ++ Sbjct: 765 NVQVHKFVCTGTLEEKIHDMIESKKQLAEQVVGAGEE 801 >gi|253700367|ref|YP_003021556.1| SNF2-related protein [Geobacter sp. M21] gi|251775217|gb|ACT17798.1| SNF2-related protein [Geobacter sp. M21] Length = 1386 Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 71/213 (33%), Gaps = 27/213 (12%) Query: 3 QYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++ +L +G+ ++ ++ + + + K+ Sbjct: 1165 LYEAIRKSALDNLAGVGKVEGKGELHLKILAEIMRLRRACCNPRLVLPDT---PIPSTKL 1221 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEW 104 A I+E+ N +V F L + + + + Sbjct: 1222 AAFGEIVEELRENRHKALVFSQFVGHLELIRQYVEKNGIPYQYLDGSTPPQERKRRVDAF 1281 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G L + G GLNL + ++ WW+ +E R + G KR Sbjct: 1282 QSGSGDLFLISLKAGGVGLNLTA-ADYVIHMDPWWNPA-----VEDQASDRAHRIGQKRP 1335 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y L+ + TI+E ++ + K + D LL+ Sbjct: 1336 VTIYRLVTRGTIEEKIVGLHQQKRGLADSLLDE 1368 >gi|259502599|ref|ZP_05745501.1| SNF2 domain protein [Lactobacillus antri DSM 16041] gi|259169414|gb|EEW53909.1| SNF2 domain protein [Lactobacillus antri DSM 16041] Length = 451 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 116/198 (58%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +L QG+ I+A N+AS + K Q+ANG V YD+++ ++H K+ ALE + Sbjct: 254 IYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCV-YDDQQQIVQIHQRKLDALEDL 312 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 IE AN P++VAY F DL++++ K IQ+WN G IPL HPAS GHG Sbjct: 313 IEAANGKPVLVAYWFKHDLSQIK--QRFTAREIKTVKDIQDWNAGNIPLALIHPASAGHG 370 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L Sbjct: 371 LNLQAGGATLIWYGLTWSLELYQQTNARLW-----RQGQRQTVVIHHIITEGTIDENILA 425 Query: 183 RLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 426 ALKRKDKTQLALINAVKA 443 >gi|262199410|ref|YP_003270619.1| SNF2-related protein [Haliangium ochraceum DSM 14365] gi|262082757|gb|ACY18726.1| SNF2-related protein [Haliangium ochraceum DSM 14365] Length = 1019 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 69/215 (32%), Gaps = 23/215 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y E ++ S + Q+ N Y E K++ + Sbjct: 750 LYQAVVTEALRRIESLDGIERRGRVLSLLMGLKQICNHPAQYLGEAGPLRRRSGKLERVT 809 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNEG 107 ++E+A + +V F RL F G ++ + E Sbjct: 810 EMLEEALAGSDKALVFTQFREMGERLVAHFEDRLGVEVAFLHGGTRRSARDEMVRRFQEQ 869 Query: 108 K--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL + + F WW+ +E R + G V Sbjct: 870 PNGPRVFVLSVKAGGVGLNLTA-ASHVFHFDRWWNPA-----VEDQATDRAYRIGQTHIV 923 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 VY + T++E + + L K + +++A ++ Sbjct: 924 QVYKFLCAGTLEEKIDRMLTKKRELASQVVSAGEQ 958 >gi|238018846|ref|ZP_04599272.1| hypothetical protein VEIDISOL_00706 [Veillonella dispar ATCC 17748] gi|237864612|gb|EEP65902.1| hypothetical protein VEIDISOL_00706 [Veillonella dispar ATCC 17748] Length = 428 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 113/199 (56%), Gaps = 8/199 (4%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + +RE L +++ A N+A+ K LQLANG Y+++ VH+EKI+ L+ Sbjct: 229 ELYKQMEREHVLSLASDDDVSALNAAALAGKLLQLANG-SIYNDDGEIVVVHNEKIERLK 287 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E P++V Y+F DL + K K + +WN+G I +L AHPAS G Sbjct: 288 ELVETNEGKPMLVFYNFKHDL-QSIKEAFPKAVELKTDDDVAKWNKGNIQMLLAHPASAG 346 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 +GLNLQ GGNI+V++ L W LE++Q R + G + V +++L+ + T+DE V Sbjct: 347 YGLNLQAGGNIIVWYGLTWSLEQYQ-----QANARLHRQGQTQPVIIHHLVTKGTMDEQV 401 Query: 181 LQRLRTKSTIQDLLLNALK 199 ++ L K QD LL A+K Sbjct: 402 MKALERKEAGQDALLEAIK 420 >gi|297583090|ref|YP_003698870.1| SNF2-like protein [Bacillus selenitireducens MLS10] gi|297141547|gb|ADH98304.1| SNF2-related protein [Bacillus selenitireducens MLS10] Length = 458 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 123/197 (62%), Gaps = 8/197 (4%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +R+L ++GE+I A N+A+ + K LQ+ANGAV YD++ +H+ K+ ALE ++E Sbjct: 257 EAIKRDLIITVEGEDITASNAAALSGKLLQMANGAV-YDDQGQPIAIHERKLDALEDMVE 315 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 AN P+++AY F DL R+Q T+ + +IQ+WNEG+I + HPAS GHGLN Sbjct: 316 AANGKPVLIAYWFKHDLDRIQ--AWIEATVLSNAASIQQWNEGRIQVGLIHPASAGHGLN 373 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ+GG+ L++F L W LE +QQ R+ + G +V +++LI + T+DE V++ L Sbjct: 374 LQFGGSTLIWFGLTWSLELYQQTNARL-----YRQGQTESVAIHHLIGKGTLDERVMKAL 428 Query: 185 RTKSTIQDLLLNALKKE 201 + K Q ++A+K E Sbjct: 429 KKKDVSQTAFIDAVKAE 445 >gi|104781117|ref|YP_607615.1| SNF2 family DNA helicase [Pseudomonas entomophila L48] gi|95110104|emb|CAK14811.1| putative DNA helicases, SNF2 family [Pseudomonas entomophila L48] Length = 946 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 70/211 (33%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-VHDEKIKA 58 Y +++ ++ +F ++ + + Sbjct: 725 LYEALRQQAVSNVSDLAPGAGRSFQILTEITRLRRFCCHPALVTPGSTLPGSKFQAVTAI 784 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK 108 +E ++ N ++ + L+ ++ F + + + + G Sbjct: 785 VEELL--DNGHKALIFSQYVDHLSIVRTWFDEKGIAYQYLDGSVPAKERESRVNAFQAGA 842 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL + ++ WW+ +E R + G +R V +Y Sbjct: 843 GEVFLISLKAGGSGLNLTA-ADYVIHLDPWWNPA-----VEDQASDRAYRIGQQRPVTIY 896 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 L+A+NTI+E ++ K + D LL + Sbjct: 897 RLVAENTIEEQIVALHARKRDLADSLLEGGE 927 >gi|227530256|ref|ZP_03960305.1| helicase [Lactobacillus vaginalis ATCC 49540] gi|227349829|gb|EEJ40120.1| helicase [Lactobacillus vaginalis ATCC 49540] Length = 451 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 116/198 (58%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +L QG+ I+A N+AS + K Q+ANG V YD+++ ++H K+ ALE + Sbjct: 254 IYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCV-YDDQQQIVQIHQRKLDALEDL 312 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P++VAY F DL +++ F IQ+WN GKIPL HPAS GHG Sbjct: 313 VEAANGKPVLVAYWFKHDLIQIKSRFKVREIKTPRD--IQDWNAGKIPLALIHPASAGHG 370 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L Sbjct: 371 LNLQAGGATLIWYGLTWSLELYQQTNARLW-----RQGQRQPVVIHHIITEGTIDENILA 425 Query: 183 RLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 426 ALKRKDKTQLALINAVKA 443 >gi|262113725|emb|CAR95392.1| hypothetical protein [Streptococcus phage phi-m46.1] Length = 458 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 115/203 (56%), Gaps = 9/203 (4%) Query: 4 YHKFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F++E +L G + A N+AS T K +QL+NGAV Y ++ +H++K+ ALE I Sbjct: 256 YIQFKKEYVLSELDGLEVTAANAASLTSKLVQLSNGAV-YSDDHSVVALHEQKLDALEDI 314 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---DPCTIQEWNEGKIPLLFAHPASC 119 +E AN P++ AY F DLAR+ + + + I+EWN+G + + HPA Sbjct: 315 LESANGEPVLGAYWFKHDLARILGRLEKLKVKSRVLKTEEDIREWNKGNVSVGLLHPAGA 374 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ GG+ LV+F L W LE +QQ R+ Q V + +++ + TIDE Sbjct: 375 GHGLNLQKGGHHLVWFGLTWSLELYQQTNARLWR----QGQESETVIIQHIVTEGTIDEE 430 Query: 180 VLQRLRTKSTIQDLLLNALKKET 202 +L+ L K Q+ L+ A+K + Sbjct: 431 ILKALENKDAQQERLIAAVKAQV 453 >gi|257094640|ref|YP_003168281.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047164|gb|ACV36352.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1003 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 70/214 (32%), Gaps = 22/214 (10%) Query: 3 QYH----KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++ ++ + +K Q+ K K+ Sbjct: 777 LYETVRVAMDEKVREEIANKGFNRSQIVILDALLKLRQVCCDPRLVKARSAQKVKERAKL 836 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNE 106 L ++ + I++ F S LA ++ ++ + Sbjct: 837 DLLMTMLPEQVEEGRRILLFSQFTSMLALIEKELKLAGIDYVILTGDTRDREAQVRRFQA 896 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++P+ + G GLNL + ++ + WW+ E R + G + VF Sbjct: 897 CEVPVFLISLKTGGVGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAHRLGQDKPVF 950 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 VY LI +I+E +L K+ + +L+ + Sbjct: 951 VYKLIVAGSIEEKILALQERKAELAAHILSEDRG 984 >gi|317153779|ref|YP_004121827.1| SNF2-like protein [Desulfovibrio aespoeensis Aspo-2] gi|316944030|gb|ADU63081.1| SNF2-related protein [Desulfovibrio aespoeensis Aspo-2] Length = 1069 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 77/206 (37%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKALE 60 K + ++ D++ + + + +K Q+ D + K A + Sbjct: 850 KKLKDQVLRDVEEKGMAKSQMSILDALLKLRQICCHPRLLKLDMPGVSTNLPSGKFDAFK 909 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKI 109 ++ ++V F L ++ + G + D+ + + I Sbjct: 910 DLVIDIIEGGHKVLVFSQFVRMLHVIRSWLQIREIPFAYLDGSSKDRFEQVDRFNDNPDI 969 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +E R + G KR VF Y Sbjct: 970 PIFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VENQATDRTHRIGQKRQVFAYK 1023 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 +I QNT++E +L+ K + + ++ Sbjct: 1024 MICQNTVEERILKLQEQKKDVAESII 1049 >gi|320354706|ref|YP_004196045.1| SNF2-like protein [Desulfobulbus propionicus DSM 2032] gi|320123208|gb|ADW18754.1| SNF2-related protein [Desulfobulbus propionicus DSM 2032] Length = 1363 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 78/212 (36%), Gaps = 24/212 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA---FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 ++ Y +++ +++G + + ++ ++ + +++ ++ K++ Sbjct: 1142 LQFYEALRQQAIENIEGSSEKTGRHLRILAEIMRLRRACCNPRLINDQ---VDIPSTKLQ 1198 Query: 58 ALEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWN 105 +E+ ++ F D K + ++ + Sbjct: 1199 VFAETVEELLGGGHKALIFSQFTGHLALIRDFLDDRGISYKYLDGTTPAKERQQQVERFQ 1258 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ L + G GLNL + ++ WW+ +E R + G KR V Sbjct: 1259 AGEGDLFLISLKAGGLGLNLTA-ADYVIHMDPWWNPA-----VEDQAADRAYRIGQKRPV 1312 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+ NTI+E +++ + K + + LL Sbjct: 1313 TVYRLVTANTIEEKIVRLHQEKRDLANSLLEG 1344 >gi|325110937|ref|YP_004272005.1| SNF2-related protein [Planctomyces brasiliensis DSM 5305] gi|324971205|gb|ADY61983.1| SNF2-related protein [Planctomyces brasiliensis DSM 5305] Length = 1120 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 78/213 (36%), Gaps = 25/213 (11%) Query: 2 KQYHKFQREL------YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + D QG + ++ Q A D K + K Sbjct: 898 KLYDELKEYYRNSIFTLMDEQGLGKTKMHVLEALLRLRQAACHPGLLDSAKTGE--SSTK 955 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEW 104 + L +E+ A +V F S LA ++ + G T D+D Sbjct: 956 LDVLTEHLEELIAENHKTLVFSQFTSLLAIVKNHLDKANIPYVYLDGSTKDRDAVVQTFQ 1015 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ IP+ + G GLNL + + WW+ +E + R + G R Sbjct: 1016 NDKDIPVFLISLKAGGLGLNLTA-ADYVFLLDPWWNPA-----VEAQAIDRAHRVGQTRN 1069 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V Y LIA+ TI+E + + + K + D +L+ Sbjct: 1070 VIAYRLIARGTIEEKIAELQQNKRKLADAILSE 1102 >gi|75909484|ref|YP_323780.1| SNF2-like helicase [Anabaena variabilis ATCC 29413] gi|75703209|gb|ABA22885.1| SNF2-related helicase [Anabaena variabilis ATCC 29413] Length = 1078 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 74/223 (33%), Gaps = 31/223 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K +++ + +K Q+ N Y + ++ K++ LE Sbjct: 835 LYQKVVETSLAEIESAEGLQRRGMILALLIKLKQICNHPAQYLKTNTLEQYSSGKLQRLE 894 Query: 61 VIIEKA----------NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPC 99 ++E+ A ++ F L R + + Sbjct: 895 EMLEEVLAESNTYGVAGAGRALIFTQFAEWGKLLKPHLEKQLGREVFFLYGSTSKKQREE 954 Query: 100 TIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + P++ + G GLNL N + F WW+ +E R Sbjct: 955 MIDRFQHDPQGPPIMILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATDRVF 1008 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V V+ + T++E + + +K + + ++ A ++ Sbjct: 1009 RIGQTRNVQVHKFVCNGTLEEKIHDMIESKKQLAEQVVGAGEE 1051 >gi|320103193|ref|YP_004178784.1| SNF2-like protein [Isosphaera pallida ATCC 43644] gi|319750475|gb|ADV62235.1| SNF2-related protein [Isosphaera pallida ATCC 43644] Length = 1912 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 75/209 (35%), Gaps = 21/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + + L G+ + ++ Q + ++ + K+ L Sbjct: 1694 KDYEELRTHYRRALLGKTKGGSHLEVLEALLRLRQASCHPGLIHPDRVDQ--PSAKLDVL 1751 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGK 108 + + ++ F L ++ + G+T ++ + N+ Sbjct: 1752 LPHLAEVIEEGHKALIFSQFTRFLNIVKDRLDKEGIVYEYLDGKTHNRAERVERFQNDPN 1811 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +P+ + G GLNL + WW+ +E + R + G VF Y Sbjct: 1812 VPVFLISLKAGGLGLNLTA-AEYVYLLDPWWNPA-----VEAQAIDRSHRIGQTSHVFAY 1865 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI ++T+++ +++ +TK + D +L Sbjct: 1866 RLICRDTVEQKIIELQKTKRALADAILGG 1894 >gi|330840007|ref|YP_004414587.1| SNF2-related protein [Selenomonas sputigena ATCC 35185] gi|329747771|gb|AEC01128.1| SNF2-related protein [Selenomonas sputigena ATCC 35185] Length = 1091 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 80/213 (37%), Gaps = 27/213 (12%) Query: 2 KQYH----KFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K YH + ++E +L+ G + + Q+A + E+ K Sbjct: 869 KVYHAWFVQAKKEFAAELKAHGFGESRIKILAILTRLRQIACDPALFLEDYT---GGSGK 925 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQE 103 + LE ++ A I++ F + L+ + + +++ Sbjct: 926 LDMLEEVVADAVAAGHRILIFSQFTTMLSHIAARLDVMNLSYAYLDGSTPALERMRRVRD 985 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G PL + G GLNL G ++++ + WW+ +E R + G K Sbjct: 986 FNAGAEPLFLISLKAGGTGLNLT-GADMVIHYDPWWNPA-----VEDQATDRAYRIGQKN 1039 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V I ++TI+E + + K + D ++ Sbjct: 1040 NVQVLKFITKDTIEEKIYELQEKKKALIDQMIQ 1072 >gi|323697573|ref|ZP_08109485.1| SNF2-related protein [Desulfovibrio sp. ND132] gi|323457505|gb|EGB13370.1| SNF2-related protein [Desulfovibrio desulfuricans ND132] Length = 1069 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 75/206 (36%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKALE 60 K + ++ D+ + + + +K Q+ D + K A + Sbjct: 850 KKLKDQVLKDVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDMPGVSTNLPSGKFDAFK 909 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKI 109 ++ ++V F L ++ + G + D+ + I Sbjct: 910 DLVVDIIEGGHKVLVFSQFVQMLHVIRNWLQIREIPFAYLDGSSKDRFEQVDRFNENPDI 969 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +E R + G KR VF Y Sbjct: 970 PIFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VENQATDRTHRIGQKRQVFAYK 1023 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 +I QNT++E +L+ K + + ++ Sbjct: 1024 MIRQNTVEERILKLQEQKKDVAEAII 1049 >gi|260888136|ref|ZP_05899399.1| helicase, Snf2 family [Selenomonas sputigena ATCC 35185] gi|260862165|gb|EEX76665.1| helicase, Snf2 family [Selenomonas sputigena ATCC 35185] Length = 1098 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 80/213 (37%), Gaps = 27/213 (12%) Query: 2 KQYH----KFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K YH + ++E +L+ G + + Q+A + E+ K Sbjct: 876 KVYHAWFVQAKKEFAAELKAHGFGESRIKILAILTRLRQIACDPALFLEDYT---GGSGK 932 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQE 103 + LE ++ A I++ F + L+ + + +++ Sbjct: 933 LDMLEEVVADAVAAGHRILIFSQFTTMLSHIAARLDVMNLSYAYLDGSTPALERMRRVRD 992 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G PL + G GLNL G ++++ + WW+ +E R + G K Sbjct: 993 FNAGAEPLFLISLKAGGTGLNLT-GADMVIHYDPWWNPA-----VEDQATDRAYRIGQKN 1046 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V I ++TI+E + + K + D ++ Sbjct: 1047 NVQVLKFITKDTIEEKIYELQEKKKALIDQMIQ 1079 >gi|313902711|ref|ZP_07836109.1| SNF2-related protein [Thermaerobacter subterraneus DSM 13965] gi|313467008|gb|EFR62524.1| SNF2-related protein [Thermaerobacter subterraneus DSM 13965] Length = 1191 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 74/210 (35%), Gaps = 23/210 (10%) Query: 2 KQYHKF----QRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + + ++ I ++ Q + ++ K Sbjct: 967 KLYRELLAAYRARVLAEVDRAGIARSRMTILEALLRLRQACCHPALL-DLPGYRNAGSAK 1025 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------PCTIQEWN 105 ++A ++ ++V F S L LQ+ + + ++ + Sbjct: 1026 LEAFRDLVHHVAGGGGKVLVFSQFTSMLDILQRELDRLGLGWERLDGRVRNREERVRRFQ 1085 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG +P+ + G GLNL + ++ + WW+ E R + G R V Sbjct: 1086 EGDVPVFLISLKAGGTGLNLTA-ASYVIHYDPWWNPAA-----EEQATGRAHRIGQDRPV 1139 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 F Y LI + T++E +LQ K + LL Sbjct: 1140 FSYKLITRGTVEEKILQLQEQKRALAGALL 1169 >gi|108756872|ref|YP_635387.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108460752|gb|ABF85937.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622] Length = 1093 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 68/214 (31%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y E ++ + + Q+AN Y E K+ + Sbjct: 834 LYKAVVDEELRRIEEADGMERRGRVLALLLYTKQIANHPAQYLGESGPLPGRSGKLARVV 893 Query: 61 VIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 ++E++ +V F L G ++ + E Sbjct: 894 EMLEESLAAGDKALVFTQFREMGDKLVAHLSEYLGHEVLFLHGGTPRKARDEMVRRFQED 953 Query: 108 K--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL + + + WW+ +E R + G RAV Sbjct: 954 VHGPRVFVLSVKAGGTGLNLTA-ASHVFHYDRWWNPA-----VEDQATDRAYRIGQTRAV 1007 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V+ L+ T++E V + L K + + ++ A + Sbjct: 1008 QVHKLVCAGTVEEKVDRLLEQKRQLAEKVVGAGE 1041 >gi|260201211|ref|ZP_05768702.1| helicase helZ [Mycobacterium tuberculosis T46] gi|289443605|ref|ZP_06433349.1| helicase helZ [Mycobacterium tuberculosis T46] gi|289416524|gb|EFD13764.1| helicase helZ [Mycobacterium tuberculosis T46] Length = 1009 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKANAAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEWNE 106 I+ + ++ F R G + + + Sbjct: 840 EILAE--GDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARFQS 897 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G P+ + G GLNL N +V WW+ +E R + G +R V Sbjct: 898 GDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRRTV 951 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V I T++E + + + K + DL++ Sbjct: 952 QVRKFICTGTLEEKIDEMIEEKKALADLVV 981 >gi|254416145|ref|ZP_05029900.1| SNF2 family N-terminal domain protein [Microcoleus chthonoplastes PCC 7420] gi|196177078|gb|EDX72087.1| SNF2 family N-terminal domain protein [Microcoleus chthonoplastes PCC 7420] Length = 1059 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 71/215 (33%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKE-VHDEKIKAL 59 Y K E +++ + ++ Q+ N +EK K+ K+ L Sbjct: 826 LYQKLVDESLVEIEAAEGIKRKGLILTLLMRLKQVCNHPAQLLKEKSLKDAKRSGKLLRL 885 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNE 106 + ++++ + ++ F L+ + I + Sbjct: 886 QEMLDEAISEGDRALIFTQFAEWGKLLKPYLAKQFDQEILFLYGATRKKQREEMIDRFQN 945 Query: 107 GK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P+L + G GLNL N + WW+ +E R + G R Sbjct: 946 DPEGPPILILSLKAGGTGLNLTR-ANHVFHIDRWWNPA-----VENQATDRAFRIGQTRN 999 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ + T++E + + +K + + + A + Sbjct: 1000 VQVHKFVCTGTLEERINDMIESKKQLAEQTVEAGE 1034 >gi|190572706|ref|YP_001970551.1| putative helicase [Stenotrophomonas maltophilia K279a] gi|190010628|emb|CAQ44237.1| putative helicase [Stenotrophomonas maltophilia K279a] Length = 1105 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 73/211 (34%), Gaps = 22/211 (10%) Query: 3 QYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++++ + G + + +K Q+ + K+ Sbjct: 863 LYETVRAAMEKQVREAISGSGLARSHIVVLDALLKLRQVCCDPRLLPGNAPARAAGSAKL 922 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNE 106 L ++ I+V F L+ + + +Q + + Sbjct: 923 DLLREMLPPMVEEGRRILVFSQFTGMLSLIAQALDDLGLAYVTLTGDTQDRATPVQRFMQ 982 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+IP+ + G GLNL + ++ F WW+ E R + G ++ VF Sbjct: 983 GEIPVFLISLKAGGVGLNLTA-ADTVIHFDPWWNPAA-----ENQASDRAHRIGQQQPVF 1036 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI +I+E + + K+ + + +L Sbjct: 1037 VYRLITAGSIEERIAELQERKALLAESILEG 1067 >gi|71909481|ref|YP_287068.1| SNF2-related:helicase, C-terminal:SWIM Zn-finger [Dechloromonas aromatica RCB] gi|71849102|gb|AAZ48598.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Dechloromonas aromatica RCB] Length = 1091 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 72/211 (34%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + ++ E +K Q+ K K+ Sbjct: 865 LYETVRAAMDAKVRDEIASKGFARSQIVILDALLKLRQVCCDPRLVKASSARKVTERAKL 924 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNE 106 L ++ + ++V F S LA ++ + I+ + + Sbjct: 925 DLLMAMLPELVDEGRRVLVFSQFTSMLALIEHELDKAGITYVTLTGDTVDREVPIRRFQD 984 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++P+ + G GLNL + ++ + WW+ +E R + G + VF Sbjct: 985 CEVPIFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQATDRAHRLGQDKPVF 1038 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI +I+E +L K+ + +L+ Sbjct: 1039 VYKLIVSGSIEEKILALQERKAELAAGILSE 1069 >gi|22299156|ref|NP_682403.1| putative helicase [Thermosynechococcus elongatus BP-1] gi|22295338|dbj|BAC09165.1| tlr1613 [Thermosynechococcus elongatus BP-1] Length = 999 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 29/216 (13%), Positives = 72/216 (33%), Gaps = 23/216 (10%) Query: 1 MKQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 M+ Y + ++ N + K Q+ N Y +++ + K++ Sbjct: 765 MQLYTAVVEDSLAAIENSQGIQRRGNILATLTKLKQICNHPAQYLKQEDYAPDRSGKLQR 824 Query: 59 LEVIIEKAN--AAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 L +++ +V F L + + ++ + Sbjct: 825 LIEMLQALQEVGDRALVFTQFAEFGTHLKTYLEKALQQEVFFLSGRTPKAQRELMVERFQ 884 Query: 106 EGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL N + + WW+ +E R + G R Sbjct: 885 HDPEAPRVFILSLKAGGVGLNLTR-ANHVFHYDRWWNPA-----VENQASDRVFRIGQAR 938 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V ++ I T++E + +++ K + ++++ + + Sbjct: 939 NVQIHKFICTGTLEEKIHEQIEQKKALAEMIVGSGE 974 >gi|83649604|ref|YP_438039.1| SNF2 family DNA/RNA helicase [Hahella chejuensis KCTC 2396] gi|83637647|gb|ABC33614.1| Superfamily II DNA/RNA helicase, SNF2 family [Hahella chejuensis KCTC 2396] Length = 1106 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 77/215 (35%), Gaps = 23/215 (10%) Query: 3 QYH----KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +++ + + ++ + +K Q+ + K K+ Sbjct: 882 LYESIRVAMDKKIRDAIAKKGVKRSHIEILDALLKLRQVCCDPSLLKLDSARKVKSSAKL 941 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNE 106 L ++ I++ F S L ++ + + + Sbjct: 942 DTLMSMLPSLLEEGRKILLFSQFTSMLGLIEAQLDKAGIEYVKLTGATKDRDTPVNRFQN 1001 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++ L + G GLNL + ++ + WW+ +E R + G + VF Sbjct: 1002 GEVSLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQATDRAYRIGQDKPVF 1055 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY LI + T++E +++ + K + D LL A K E Sbjct: 1056 VYKLITEGTVEEKIVELQKQKQALADNLL-ADKAE 1089 >gi|307947430|ref|ZP_07662764.1| helicase superfamily protein II [Roseibium sp. TrichSKD4] gi|307769572|gb|EFO28799.1| helicase superfamily protein II [Roseibium sp. TrichSKD4] Length = 906 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 78/214 (36%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + +L L+ + ++ Q+ N + ++ W E K+ L Sbjct: 674 LYAQTVDDLAKKLEHLDGIQRRGLVLATLMRLKQICNHPSQWLDDDDWNEADSGKLARLR 733 Query: 61 VI--IEKANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWN-E 106 I + + ++V F + L+ G + K + + + Sbjct: 734 EISEVVASRQEKMLVFTQFQEVIEPLRTFLGSVFGKDGLVLHGGTAVAKRKKLVSAFQED 793 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 IP + G GL L + +V F WW+ +E R + G K+ V Sbjct: 794 ETIPFFILSLKAGGSGLTLTA-ASHVVHFDRWWNPA-----VENQATDRAYRIGQKKNVL 847 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ L+ + T++E + + TK + D LL+ K+ Sbjct: 848 VHKLLCRGTMEEKIDAMINTKQELADALLSKTKE 881 >gi|237654129|ref|YP_002890443.1| SNF2-related protein [Thauera sp. MZ1T] gi|237625376|gb|ACR02066.1| SNF2-related protein [Thauera sp. MZ1T] Length = 1100 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 22/211 (10%) Query: 3 QYH----KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++ ++ G+ +K Q+ + K+ Sbjct: 871 LYETVRAAMDEKVRAEIAGKGFARSQIVILDALLKLRQVCCDPRLLKSPAALRVKERAKL 930 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNE 106 L ++ + I+V F + L + ++++ + Sbjct: 931 DLLMDMLPELIDEGRRILVFSQFTTMLGLIAAELDKAKIGWVALTGDTRDRRVPVEDFQK 990 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + ++ + WW+ E R + G + VF Sbjct: 991 GRVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAHRIGQDKPVF 1044 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ L+ +I+E +L K+ + + +L+ Sbjct: 1045 VFKLVCAGSIEEKILALQERKAALAESVLSE 1075 >gi|89902690|ref|YP_525161.1| SNF2-like protein [Rhodoferax ferrireducens T118] gi|89347427|gb|ABD71630.1| SNF2-related [Rhodoferax ferrireducens T118] Length = 1178 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 75/209 (35%), Gaps = 24/209 (11%) Query: 3 QYHKFQ-------RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 Y + RE D +G +K Q+ K + K Sbjct: 951 LYETIRLGMEKSVREAL-DTKGMAKSQITILDALLKLRQVCCDPHLVTLAAAKKVSNSAK 1009 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWN 105 ++ L ++ + I++ F S L ++ K I+++ Sbjct: 1010 LERLMEMLPEMLAEGRRILLFSQFTSMLKLIEAELQKRNIPWIKLTGQSQKRDALIEQFT 1069 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G +PL + G GLNL + ++ + WW+ +E R + G ++V Sbjct: 1070 SGAVPLFLISLKAGGVGLNLPQ-ADTVIHYDPWWNPA-----VENQATDRAHRIGQTQSV 1123 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +V L+AQ TI+E +L K+ + + + Sbjct: 1124 WVVKLVAQGTIEERILGLQERKAALAESM 1152 >gi|219558075|ref|ZP_03537151.1| Snf2/Rad54 family helicase [Mycobacterium tuberculosis T17] Length = 527 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 298 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 357 Query: 61 VIIEKANAAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEWNE 106 I+ + ++ F R G + + + Sbjct: 358 EILAE--GDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARFQS 415 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G P+ + G GLNL N +V WW+ +E R + G +R V Sbjct: 416 GDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRRTV 469 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V I T++E + + + K + DL++ Sbjct: 470 QVRKFICTGTLEEKIDEMIEEKKALADLVV 499 >gi|312878818|ref|ZP_07738618.1| SNF2-related protein [Aminomonas paucivorans DSM 12260] gi|310782109|gb|EFQ22507.1| SNF2-related protein [Aminomonas paucivorans DSM 12260] Length = 1027 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 72/215 (33%), Gaps = 24/215 (11%) Query: 3 QYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y E + + + Q+ N ++ + E K+ L Sbjct: 797 LYRAVLDRGEERVAE-SQGMTRRGEVLALLTRLKQVCNHPAHFLGDGSPLEGRSGKLARL 855 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWN- 105 ++ + +V F L+ G + ++ + Sbjct: 856 VELLAQVREQGECALVFSQFAEMGGLLRDYLQRRLGEEVLFLHGGVPRVRRDEMVERFQG 915 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG + + G GL L N +V + WW+ +E R + G ++ V Sbjct: 916 EGGPGVFVLSLKAGGTGLTL-SRANHVVHYDRWWNPA-----VEDQATDRAYRIGQRKNV 969 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 FV+ LI T++E + L +K+ + D ++ A ++ Sbjct: 970 FVHPLIVAGTLEERIDALLESKADLADRVVGAGER 1004 >gi|37521987|ref|NP_925364.1| helicase [Gloeobacter violaceus PCC 7421] gi|35212986|dbj|BAC90359.1| gll2418 [Gloeobacter violaceus PCC 7421] Length = 1054 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 74/216 (34%), Gaps = 24/216 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 Y +E+ ++ A + + Q+ N + + ++ + K+ L Sbjct: 822 LYAAVLKEVEAQIEQVEGIARKGLILATLTRLKQICNHPMQFLQDGSAFSPERSHKLCRL 881 Query: 60 EVIIEKA--NAAPIIVAY-----------HFNSDLARLQKAFPQGRTLDKDPCTIQEWNE 106 + + E+ ++V HF G + +K I ++ + Sbjct: 882 DEMAEEVLAEGESLLVFTQFHEIGAALERHFRQVRRWGTYYIHGGVSREKREKLIADFQD 941 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G G+ L N + F WW+ +E R + G + Sbjct: 942 PDSEPAVFILSLKAGGVGITLTR-ANHVFHFDRWWNPA-----VEDQATDRAFRIGQTKN 995 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 VFV+ +A T++E + + L K + ++ + + Sbjct: 996 VFVHKFVALGTLEERIDRMLEEKKRLASAIVGSDEG 1031 >gi|312897717|ref|ZP_07757133.1| protein, SNF2 family [Megasphaera micronuciformis F0359] gi|310621101|gb|EFQ04645.1| protein, SNF2 family [Megasphaera micronuciformis F0359] Length = 463 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 77/204 (37%), Positives = 120/204 (58%), Gaps = 11/204 (5%) Query: 4 YHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + + + +L GE I A ++A+ + K QLANGAV YDE ++ E+HD KI+A + Sbjct: 256 YDEMETRMVLELVESGEEITAVSAAALSTKLQQLANGAV-YDELRNVHEIHDCKIEAFKE 314 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPAS 118 +IE+ + P +V Y+F DL RL+ A + + + K+ +EWNEGKI +L AHPAS Sbjct: 315 LIEQLSGKPALVFYNFKHDLERLKAALDKSKLIVKELKGATEEREWNEGKIDVLLAHPAS 374 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 +GLNLQ GGN +++F L W LE +Q R + G + V +++LI+ T DE Sbjct: 375 TAYGLNLQDGGNHVIWFGLNWSLELYQ-----QANKRLHRQGQREKVIIHHLISIGTRDE 429 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 +++ L K+ Q+ +L +LK Sbjct: 430 DMMEALNRKADAQEYVLQSLKARI 453 >gi|160935260|ref|ZP_02082643.1| hypothetical protein CLOBOL_00156 [Clostridium bolteae ATCC BAA-613] gi|158441991|gb|EDP19688.1| hypothetical protein CLOBOL_00156 [Clostridium bolteae ATCC BAA-613] Length = 456 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 7/206 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M++Y + ++E +L G+ I A ++A+ K LQLANGA Y E + +HD K+ AL Sbjct: 253 MRKYRELEKEKLLELDGKEITALSAAAVWGKLLQLANGAAYDGE-GNVIPLHDRKLDALA 311 Query: 61 VIIEKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 I+E + P++V Y+F D R + + K I++WNEG+IPLL A PAS Sbjct: 312 EILEASGGHPVLVFYNFRHDYDRLMGRFKGYNPRTLKSQQDIRDWNEGRIPLLLAQPASM 371 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLN+Q GG+I+V+F L LE + R + G AV ++ LI + T+DE Sbjct: 372 GHGLNIQAGGHIIVWFGLNPSLELYL-----QANARLHRQGQTEAVIIHRLITKGTVDED 426 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 V+++L K QD L+ +LK + Sbjct: 427 VVKKLWVKDETQDGLMESLKARIRRI 452 >gi|224826766|ref|ZP_03699866.1| Non-specific serine/threonine protein kinase [Lutiella nitroferrum 2002] gi|224600986|gb|EEG07169.1| Non-specific serine/threonine protein kinase [Lutiella nitroferrum 2002] Length = 1370 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 77/214 (35%), Gaps = 24/214 (11%) Query: 1 MKQYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y +++ L ++ + ++ + + + E+ K+K Sbjct: 1149 LHLYEALRQQAVDKLDALGEQDNKPLKVLAEITRLRRFCCHPRLALPD---SELAGSKLK 1205 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 A I ++ N +V F LA ++ + + + + Sbjct: 1206 AFAEIADELLENRHKALVFSQFVDHLAIVRAWLDERGIAYQYLDGSTPARERKARVDAFQ 1265 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ L + G GLNL + ++ WW+ +E R + G +R V Sbjct: 1266 AGQGDLFLISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQASDRAHRMGQQRPV 1319 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L+A++TI+E ++ K + D LL + Sbjct: 1320 TVYRLVAEHTIEEQIVALHAAKRDLADSLLEGGE 1353 >gi|256847828|ref|ZP_05553273.1| superfamily II DNA/RNA helicase [Lactobacillus coleohominis 101-4-CHN] gi|256715517|gb|EEU30493.1| superfamily II DNA/RNA helicase [Lactobacillus coleohominis 101-4-CHN] Length = 451 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 76/198 (38%), Positives = 114/198 (57%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +L QG+ I+ N+ S + K Q+ANG V YD+++ ++H K+ ALE + Sbjct: 254 IYDELNAQLVVSTQGKQIDVLNATSLSNKLCQMANGCV-YDDQQQIVQIHQRKLDALEDL 312 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P++VAY F DL +++ K P IQ+WN G IPL HPAS GHG Sbjct: 313 VEAANGKPVLVAYWFKHDLIQIK--SRFKVREIKTPRDIQDWNAGNIPLALIHPASAGHG 370 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L Sbjct: 371 LNLQAGGATLIWYGLTWSLELYQQTNARLW-----RQGQRQPVVIHHIITEGTIDENILA 425 Query: 183 RLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 426 ALKRKDKTQLALINAVKA 443 >gi|159898290|ref|YP_001544537.1| non-specific serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC 23779] gi|159891329|gb|ABX04409.1| Non-specific serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC 23779] Length = 1055 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDL----QGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y +++ + L + I ++ Q+ N + H K Sbjct: 834 KLYQRYRDQYRAMLLSLIDDQGINDSRIKVLEGLLRLRQICNHPQLV---EATFRGHSAK 890 Query: 56 IKALEVIIE--KANAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWN 105 L +E A ++ F L R + + + Sbjct: 891 FDQLLETLEVLHAEGHKALIFSQFVQMLTLLWKELDRRNLSYAYLDGKTNNRAAVVDRFQ 950 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +I + G GLNL + ++ WW+ Q R + G + Sbjct: 951 TDPQIHFFLISLKAGGVGLNLTA-ADYVIHIDPWWNPAVEQ-----QATDRTHRIGQDKP 1004 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VF+Y LI +N+++E +LQ K + + ++ + Sbjct: 1005 VFIYKLIVRNSVEEKILQLQERKRALANNIITS 1037 >gi|186686080|ref|YP_001869276.1| SNF2-related protein [Nostoc punctiforme PCC 73102] gi|186468532|gb|ACC84333.1| SNF2-related protein [Nostoc punctiforme PCC 73102] Length = 1403 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 76/212 (35%), Gaps = 25/212 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + EA ++ +K + E+ K++ Sbjct: 1184 YEALRRQAISKLTESDAEAGKKHLQVLAEIMKLRRACCNPSLVMPGT---ELPSSKLQLF 1240 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 ++ + N +V F L ++ Q ++ + + + G Sbjct: 1241 GEVLGELLENRHKALVFSQFVDHLHIIRDYLEQQGINYQYLDGSTSVAERKKRVDAFQAG 1300 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + ++ WW+ +E R + G +R V + Sbjct: 1301 SGDVFLISLKAGGTGLNLTA-ADYVIHTDPWWNPA-----VEDQASDRAHRIGQQRPVTI 1354 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y L+A++TI+E +++ K + D LL + Sbjct: 1355 YRLVAKDTIEEKIVELHHHKRDLADSLLEGTE 1386 >gi|253580974|ref|ZP_04858236.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847816|gb|EES75784.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 1114 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 71/213 (33%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + + L + ++ K Q+ + K+ Sbjct: 891 KLYDAHVKRMMLMLDKQSEEEFKTSKITILAELTKLRQICCDPSLIFADYKA---DSAKV 947 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 +I + I++ F + L + +K ++ + Sbjct: 948 DMCLNMISNAVESGHKILLFSQFTTMLDHLAKRLEEEKISYYMLTGSTSKEKRAQMVENF 1007 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + + G GLNL +I++ F WW+L ++ R + G K Sbjct: 1008 NTDDTQVFCISLKAGGTGLNLTA-ADIVIHFDPWWNLA-----VQNQATDRAHRIGQKNV 1061 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY LI ++TI+E +L+ K + D +L Sbjct: 1062 VNVYKLIVKDTIEENILKLQEKKRELADQILEG 1094 >gi|296132117|ref|YP_003639364.1| SNF2-related protein [Thermincola sp. JR] gi|296030695|gb|ADG81463.1| SNF2-related protein [Thermincola potens JR] Length = 1084 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 77/213 (36%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + Q E+ ++ G + + Q+ + E K Sbjct: 861 KIYLAYLKQAQGEIMREIGTVGFEKSRMKILAALTRLRQICCHPGLFIENYT---GDSGK 917 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 ++ L+ +IE A I++ F S L ++ ++ Sbjct: 918 MQLLQEVIEDALAGGHRILLFSQFTSMLGIIREYLVSQNIEYHYLDGNTRAEQRQEMVRA 977 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G + + G GLNL G +++V F WW+ +E R + G ++ Sbjct: 978 FNAGDGQVFLISLKAGGTGLNLT-GADMVVHFDPWWNPA-----VEDQATDRAYRIGQQQ 1031 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V+ L+ + TI+E + + K + D ++ Sbjct: 1032 VVQVFKLVTRGTIEEKIFTLQQKKKELIDSVIQ 1064 >gi|289570215|ref|ZP_06450442.1| predicted protein [Mycobacterium tuberculosis T17] gi|289543969|gb|EFD47617.1| predicted protein [Mycobacterium tuberculosis T17] Length = 517 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 288 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 347 Query: 61 VIIEKANAAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEWNE 106 I+ + ++ F R G + + + Sbjct: 348 EILAE--GDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARFQS 405 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G P+ + G GLNL N +V WW+ +E R + G +R V Sbjct: 406 GDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRRTV 459 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V I T++E + + + K + DL++ Sbjct: 460 QVRKFICTGTLEEKIDEMIEEKKALADLVV 489 >gi|225405817|ref|ZP_03761006.1| hypothetical protein CLOSTASPAR_05038 [Clostridium asparagiforme DSM 15981] gi|225042657|gb|EEG52903.1| hypothetical protein CLOSTASPAR_05038 [Clostridium asparagiforme DSM 15981] Length = 459 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 11/207 (5%) Query: 1 MKQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y + +R++ +L +I ++A+ + K LQLANGAV YDE++ E+H KI+A Sbjct: 254 LNAYTELERKMILELPEDESDISVTSAAALSNKLLQLANGAV-YDEDRTVHEIHGCKIEA 312 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---DPCTIQEWNEGKIPLLFAH 115 +IE P +V Y++ D R+ KA + + P +WN KI +L H Sbjct: 313 FLELIESLQGKPALVFYNYQHDRERILKALAGSKLRIRELKKPQDEDDWNARKIDILLTH 372 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 PAS +GLNLQ GGN +++F L W+ E + R + G V +++L+ T Sbjct: 373 PASSAYGLNLQQGGNHVIWFGLTWNYELYT-----QANKRLHRQGQTEKVIIHHLVCSGT 427 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKET 202 DE V+Q L+ K +Q+ ++ +LK Sbjct: 428 RDEDVMQALQRKDDVQNWVMESLKARI 454 >gi|29840686|ref|NP_829792.1| Snf2/Rad54 family helicase [Chlamydophila caviae GPIC] gi|29835036|gb|AAP05670.1| helicase, Snf2/Rad54 family [Chlamydophila caviae GPIC] Length = 1205 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 85/222 (38%), Gaps = 24/222 (10%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DE 54 K Y + + + + + + + Q+ N + + H Sbjct: 956 KLYQSTLKREKAQIQQLESPEEQTVNYLHVFALLNHLKQICNHPAIFFKNPDKYREHESG 1015 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQE 103 K A ++ ++ + ++V + + + + A QG++L++ Sbjct: 1016 KWNAFVRLLHESLSSGYKVVVFSQYIHMIRIIMLYLEEIGVKYASIQGKSLNRKEEIEYF 1075 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1076 TTDPECRVFVGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQKN 1129 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + D +++ +H+ Sbjct: 1130 TVFIYKLMTEDTLEERIHYLIEKKIRLLDKVISTQNSNILHM 1171 >gi|78186764|ref|YP_374807.1| DEAD/DEAH box helicase-like [Chlorobium luteolum DSM 273] gi|78166666|gb|ABB23764.1| DEAD/DEAH box helicase-like protein [Chlorobium luteolum DSM 273] Length = 1006 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 72/215 (33%), Gaps = 23/215 (10%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y EL ++ + VK Q+ N V + + K++ L Sbjct: 775 LYKAVVDELQEKIESSEGIERRGMVLALLVKLKQVCNHPVQFLGDNSSVADRSGKLQRLL 834 Query: 61 VIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 ++ + ++ +V F L + K I+ + G Sbjct: 835 ELLAEIRESSERTLVFTQFREMGSLLQAHLQERLGEEVFFLHGSLSRKKRDEMIEAFQNG 894 Query: 108 K--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL + ++ + WW+ +E R + G K V Sbjct: 895 DDAPRIFILSLKAGGSGLNLTK-ASHVIHYDRWWNPA-----VENQATDRAFRIGQKHNV 948 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ I T++E + + + K+T+ +L ++ Sbjct: 949 EVHKFITAGTLEERIDEMIEKKTTVSGTVLGNGEQ 983 >gi|303239099|ref|ZP_07325629.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] gi|302593437|gb|EFL63155.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] Length = 452 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 77/201 (38%), Positives = 111/201 (55%), Gaps = 8/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y K +RE +++A N+A K LQ++NGAV YDE + +H K++ LE Sbjct: 254 ELYRKLEREALLPFVDGDVDAVNAAVLAGKLLQMSNGAV-YDENGGVRSIHRRKLEMLED 312 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++V Y + D R+ KAF P I +WN+G+I + AHPAS GH Sbjct: 313 LIESANGKPVLVYYAYKHDRERILKAFKARDIDT--PKDISDWNDGRIGIAIAHPASAGH 370 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ GG+ +++F L W LE +QQ RI + G V V ++I T+DE V+ Sbjct: 371 GLNLQAGGSTIIWFGLTWSLELYQQANGRI-----HRQGQTETVIVNHIITAGTMDEQVM 425 Query: 182 QRLRTKSTIQDLLLNALKKET 202 L K T Q L+NA++ Sbjct: 426 AALNRKETGQTALINAVRARM 446 >gi|298242061|ref|ZP_06965868.1| SNF2-related protein [Ktedonobacter racemifer DSM 44963] gi|297555115|gb|EFH88979.1| SNF2-related protein [Ktedonobacter racemifer DSM 44963] Length = 1068 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 70/214 (32%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +E+ + S ++ Q+ N ++ ++ K+ LE Sbjct: 837 LYDAVVKEMLEKIDDAKGIERKGMILSALLRLKQVCNHPAHFMGDESALGKRSGKVLRLE 896 Query: 61 VIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNE- 106 ++E+ ++ F L R G + + + Sbjct: 897 EMLEEVLAEGDKALIFTQFAEMGQLLRRHLQEQLGREVLFLHGGTPKKVRDQLVTRFQDE 956 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 PL + G GLNL N + F WW+ +E R + G R V Sbjct: 957 RDDAPLFLLSLKAGGVGLNLTA-ANHVFHFDRWWNPA-----VENQATDRAFRIGQHRNV 1010 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V+ + T++E + + +K + + ++ + + Sbjct: 1011 QVHKFVCVGTLEERIDAMIESKKALAENIIGSGE 1044 >gi|322419843|ref|YP_004199066.1| SNF2-like protein [Geobacter sp. M18] gi|320126230|gb|ADW13790.1| SNF2-related protein [Geobacter sp. M18] Length = 1385 Score = 131 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 74/213 (34%), Gaps = 27/213 (12%) Query: 3 QYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++ +L +G+ ++ ++ + + + K+ Sbjct: 1162 LYQAIRKSALDNLAGIGKVEGKGELHLKILAEIMRLRRACCNPRLVLPDSA---IASAKL 1218 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 A I+E+ N +V F L +++ + + + + Sbjct: 1219 AAFAEIVEELRENRHKALVFSQFVGHLEIIREHVERAGIPYQYLDGSTPAVERKRRVDAF 1278 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ L + G GLNL + ++ WW+ +E R + G +R Sbjct: 1279 QSGEGDLFLISLKAGGVGLNLTA-ADYVIHMDPWWNPA-----VEDQASDRAHRIGQQRP 1332 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y L+ + TI+E ++ + K + D LL Sbjct: 1333 VTIYRLVTKGTIEEKIVGLHQQKRGLADSLLEE 1365 >gi|327461127|gb|EGF07460.1| SNF2 domain protein [Streptococcus sanguinis SK1057] Length = 450 Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 128/199 (64%), Gaps = 7/199 (3%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F+ E+ L+G+ ++A NSAS + K LQ+ANG V YD+ + +HD+K+ ALE + Sbjct: 251 VYKEFKAEMVVSLKGQVLDAVNSASLSNKLLQMANGMV-YDDNRKTVLLHDQKLVALEEM 309 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E N P+++AY F DL R+++ +P+ R + I++WN+GKI L HPAS GHG Sbjct: 310 VESMNGRPLLIAYCFQHDLRRIKERYPEARV-IQSNQDIEDWNKGKIVLGLIHPASSGHG 368 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG+ + +F L W LE +QQ+ R+ + G K V V+++I +N+IDE V++ Sbjct: 369 LNLQAGGHTICWFGLTWSLELYQQLNARLW-----RQGQKETVVVHHIITKNSIDEQVMK 423 Query: 183 RLRTKSTIQDLLLNALKKE 201 RL+ K Q L++A+K E Sbjct: 424 RLKEKDISQQSLIDAVKYE 442 >gi|17231890|ref|NP_488438.1| hypothetical protein alr4398 [Nostoc sp. PCC 7120] gi|17133534|dbj|BAB76097.1| alr4398 [Nostoc sp. PCC 7120] Length = 1075 Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 75/223 (33%), Gaps = 31/223 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K +++ + +K Q+ N Y + ++ K++ LE Sbjct: 832 LYQKAVETSLAEIESAEGLQRRGMILALLIKLKQICNHPAQYLKINTLEQHSSGKLQRLE 891 Query: 61 VIIEKA----------NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPC 99 ++E+ A ++ F L R G + + Sbjct: 892 EMLEEVLAESNTYGVAGAGRALIFTQFAEWGKLLKPHLEKQLGREIFFLYGGTSKKQREE 951 Query: 100 TIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + P++ + G GLNL N + F WW+ +E R Sbjct: 952 MIDRFQHDPQGPPIMILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATDRVF 1005 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V V+ + T++E + + +K + + ++ A ++ Sbjct: 1006 RIGQTRNVQVHKFVCNGTLEEKIHDMIESKKQLAEQVVGAGEE 1048 >gi|271968044|ref|YP_003342240.1| SNF2/helicase domain-containing protein [Streptosporangium roseum DSM 43021] gi|270511219|gb|ACZ89497.1| SNF2/helicase domain protein [Streptosporangium roseum DSM 43021] Length = 1040 Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 22/214 (10%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y ++ + G N + + Q+ N + ++ K+ L Sbjct: 810 ELYKAVVNDMLDRIDGSRGIERRGNVLATMTRLKQICNHPAHLLKDGSRLAGRSGKLARL 869 Query: 60 EVIIEKAN--AAPIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTIQEWN- 105 E + E+ +V + L R G ++ ++ + Sbjct: 870 EELAEEIVEEGDKALVFTQYTEFGSLLQPYLAAHLDRPVLWLHGGLPKNRREELVERFQR 929 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + L + G GLNL N ++ WW+ +E R + G R V Sbjct: 930 DDEPMLFLLSLKAAGTGLNLTA-ANHVIHVDRWWNPA-----VENQATDRAFRIGQTRNV 983 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V I +T++E + + + K + + ++ A + Sbjct: 984 QVRKFICVDTLEERIDEMIERKKALAESVVGAGE 1017 >gi|258545090|ref|ZP_05705324.1| Snf2 family protein [Cardiobacterium hominis ATCC 15826] gi|258519667|gb|EEV88526.1| Snf2 family protein [Cardiobacterium hominis ATCC 15826] Length = 1017 Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 76/217 (35%), Gaps = 25/217 (11%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++ L G + +K Q+ N + + + K Sbjct: 796 KLYDATKKRYREQLLHQIAADGIEKSQLHILDGLLKLRQICNSPALLADREDY-GDDSAK 854 Query: 56 IKALEVIIEKANA-APIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWN 105 + L I++ I+V F L +Q + G+T D+ Sbjct: 855 LDLLLENIKEKTGAHKILVFSSFVKMLGLIQARLDAENIPYEYLDGQTRDRKAKVENFQT 914 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNL + + WW+ +E + R + G ++ V Sbjct: 915 NDAVRVFLISTKAGGTGLNLTE-ADYVFIVDPWWNPA-----VENQAIDRSHRIGQEKHV 968 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL--NALKK 200 Y +I +N+I+E +L K I + ++ ++ KK Sbjct: 969 MAYRIICKNSIEEKILALQDKKRRIAESIISVDSDKK 1005 >gi|225376574|ref|ZP_03753795.1| hypothetical protein ROSEINA2194_02216 [Roseburia inulinivorans DSM 16841] gi|225211611|gb|EEG93965.1| hypothetical protein ROSEINA2194_02216 [Roseburia inulinivorans DSM 16841] Length = 1098 Score = 131 bits (328), Expect = 8e-29, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 34/230 (14%) Query: 1 MKQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y +++ L G+ ++ K QL E+ + K Sbjct: 876 LALYDAHVQQMKQMLDGKSEAEFKSNKIQILAELTKLRQLCCDPALLFEDYKGE---SAK 932 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 ++ +I +++ F + L R +K + Sbjct: 933 VQMCMDLIGNAVHGGHKVLLFSQFTTMLDRLAEQLTKLGIDYYMLTGSVNKEKRMQMVDS 992 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+ +P+ + G GL+L +I++ + WW++ ++ R + G K Sbjct: 993 FNKDDVPVFCISLKAGGTGLSLTA-ADIVIHYDPWWNVA-----VQNQATDRAHRIGQKN 1046 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--------LKKETIHV 205 V VY L++Q TI+E ++ K + + +L K+E + + Sbjct: 1047 VVTVYKLVSQGTIEEKIIDIQEKKKKLAEQVLEGEGMDSVVFTKEEIMEL 1096 >gi|37521835|ref|NP_925212.1| helicase [Gloeobacter violaceus PCC 7421] gi|35212834|dbj|BAC90207.1| glr2266 [Gloeobacter violaceus PCC 7421] Length = 1008 Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 70/214 (32%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + E ++ + VK Q+ N +Y + K+ L Sbjct: 772 LYERVVNESLAKIEQSTGIQRRGTVLATLVKLKQICNHPSHYLGDDGPLANRSGKLSRLG 831 Query: 61 VIIEKA--NAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEG 107 ++E+ + ++ F G + ++ I+ + Sbjct: 832 EMLEEVLADEERALIFTQFAEWGHLLQAHLSRQLGSEVFFLYGGTSKNQREAMIERFQSD 891 Query: 108 K--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL N + F WW+ +E R + G + V Sbjct: 892 PQGPRIFILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATDRVFRIGQTKNV 945 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY + T++E + + +K + + +++A + Sbjct: 946 QVYKYVCTGTLEERINALIESKKALAEQVVSAGE 979 >gi|158334343|ref|YP_001515515.1| SNF2 family helicase putative [Acaryochloris marina MBIC11017] gi|158304584|gb|ABW26201.1| helicase, SNF2 family, putative [Acaryochloris marina MBIC11017] Length = 1407 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 81/215 (37%), Gaps = 25/215 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 M Y +R+ +L + +A ++ +K + A E K+ Sbjct: 1185 MALYEALRRQAIANLADSDAQAGAKHLQVLAEIMKLRRTCCNAQLVMPESPPA---SAKL 1241 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEW 104 + ++E+ AN +V F L LQ + + + ++ + Sbjct: 1242 QLFGEVLEELLANHHKALVFSQFVDHLKILQDYLEKKQIAYQYLDGSTPAKIRQLRVKAF 1301 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + + G GLNL + ++ WW+ +E R + G +R Sbjct: 1302 QSGEGEVFLISLKAGGTGLNLTA-ADYVIHMDPWWNPA-----VEDQASDRAHRIGQRRP 1355 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V +Y L+A+NTI+E ++ R K + D LL + Sbjct: 1356 VTIYRLVAKNTIEEKIVDLHRHKRDLADSLLEGTE 1390 >gi|254425442|ref|ZP_05039160.1| SNF2 family N-terminal domain protein [Synechococcus sp. PCC 7335] gi|196192931|gb|EDX87895.1| SNF2 family N-terminal domain protein [Synechococcus sp. PCC 7335] Length = 1081 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 71/217 (32%), Gaps = 24/217 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKA 58 + Y K ++ VK Q+ N + ++ K K++ Sbjct: 846 RLYQKLVDSTLGEIDEATGLQRRGMILGLLVKLKQICNHPAQFLQQDSLGKSRRSGKLQR 905 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 L+ ++E+ ++ F L + +K + + Sbjct: 906 LDEMLEEVVAEGDRALIFTQFAEWGKLLSSHLEHRLGTESLFLYGSTSKNKREEMVDRFQ 965 Query: 106 EGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL N + F WW+ +E R + G + Sbjct: 966 LDPNGPKIFILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATDRAFRIGQTK 1019 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ + T++E + + + +K + + ++ A ++ Sbjct: 1020 NVQVHKFVCTGTLEERINEMINSKKALAEQVVGAGEQ 1056 >gi|186687055|ref|YP_001870198.1| SNF2-related protein [Nostoc punctiforme PCC 73102] gi|186469358|gb|ACC85157.1| SNF2-related protein [Nostoc punctiforme PCC 73102] Length = 1403 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 75/210 (35%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + +A ++ +K + + + K++ Sbjct: 1184 YEALRRQAISKLTESDADAGKKHLQVLAEIMKLRRACCNPSLVMPDTV---LPSSKLQLF 1240 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 ++ + N +V F L ++ Q ++ + + + G Sbjct: 1241 GEVLGELLENRHKALVFSQFVDHLHIIRDYLEQQGINYQYLDGSTSVAERKKRVDAFQAG 1300 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + ++ WW+ +E R + G +R V + Sbjct: 1301 SGDVFLISLKAGGTGLNLTA-ADYVIHTDPWWNPA-----VEDQASDRAHRIGQQRPVTI 1354 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI+E ++Q K + D LL Sbjct: 1355 YRLVAKDTIEEKIVQLHHQKRDLADSLLEG 1384 >gi|159901735|ref|YP_001547981.1| non-specific serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC 23779] gi|159894774|gb|ABX07853.1| Non-specific serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC 23779] Length = 1021 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 72/211 (34%), Gaps = 22/211 (10%) Query: 2 KQYHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y +++ + L G N ++ Q+ N + + E+ Sbjct: 800 KLYQRYRDQYRAQLLSLIDDHGMNDSRMKVLEGLLRLRQICNHPRLVESTFRGRSAKFEQ 859 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWN-E 106 + I+ +A ++ F L L++ Q + + + Sbjct: 860 LLETLAIL-QAEGHKALIFSQFVQMLTILREHLDQQNVSYTYLDGKTQNRAAVVDRFQTD 918 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL + ++ WW+ Q R + G ++ VF Sbjct: 919 PHVHFFLISLKAGGVGLNLTA-ADYVIHIDPWWNPAVEQ-----QATDRTHRIGQEKPVF 972 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y LI + +++E ++ K + D ++ + Sbjct: 973 IYKLIVRESVEEKMVHLQERKRALADSIITS 1003 >gi|240145145|ref|ZP_04743746.1| superfamily II DNA/RNA helicase, SNF2 family [Roseburia intestinalis L1-82] gi|257202823|gb|EEV01108.1| superfamily II DNA/RNA helicase, SNF2 family [Roseburia intestinalis L1-82] gi|291537657|emb|CBL10769.1| Superfamily II DNA/RNA helicases, SNF2 family [Roseburia intestinalis M50/1] gi|291537792|emb|CBL10903.1| Superfamily II DNA/RNA helicases, SNF2 family [Roseburia intestinalis XB6B4] Length = 1099 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 81/230 (35%), Gaps = 34/230 (14%) Query: 1 MKQYHKF---QRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 M+ Y + +E+ + S+ K QL E+ H + K Sbjct: 877 MQLYDAYATRMKEMLSQQNEKEFHKGRMQILSELTKLRQLCCDPGLLLEDYHGE---SAK 933 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 +I A I++ F S L R +K ++ Sbjct: 934 TDMCMELIVNAVGAGHKILLFSQFTSMLDRLTERLKKEGIDYYLLTGSVNKEKRMQMVES 993 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N +P+ + G GLNL +I++ + WW++ ++ R + G K Sbjct: 994 FNNDDVPVFCISLKAGGTGLNLTS-ADIVIHYDPWWNVA-----VQNQATDRAHRIGQKH 1047 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--------LKKETIHV 205 V VY L+A+ TI+E ++ K + + +L K+E + + Sbjct: 1048 VVTVYKLVAEGTIEEKIIDIQERKKKLAEQVLEGEGMDSASFTKEEILEL 1097 >gi|303238661|ref|ZP_07325194.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] gi|302593780|gb|EFL63495.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] Length = 1088 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 73/213 (34%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F ++ ++ +G + + Q+ + E K Sbjct: 865 KLYAAFLKQAQGEVAAEIREKGIERSKIKILALLTRLRQICCHPAMFVENYK---GGSGK 921 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQE 103 + L II + +++ F S + + + Sbjct: 922 LDTLLEIIGDSIDSGHRLLLFSQFTSMHDIIGKALKESGKSYFYIDGSTKAKERIDMVNR 981 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ L + G GLNL G ++++ + WW+ +E R + G + Sbjct: 982 FNNGENDLFLISLKAGGTGLNLT-GADMVIHYDPWWNPA-----VEDQATDRAYRIGQTK 1035 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 AV V+ +I + TI+E + + K + + ++ Sbjct: 1036 AVQVFKIITKGTIEEKIYELQEKKRGLINNVIQ 1068 >gi|121604005|ref|YP_981334.1| SNF2-like protein [Polaromonas naphthalenivorans CJ2] gi|120592974|gb|ABM36413.1| SNF2-related protein [Polaromonas naphthalenivorans CJ2] Length = 899 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 69/211 (32%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y L L+ ++ Q+ N + + WK K L Sbjct: 667 LYQDAVHNLAAALEDAEGIGRKGLVLSFLMRFKQICNHPSQWLGDGAWKAQDSGKFARLR 726 Query: 61 VII--EKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 ++ A ++V F R G + + ++ + + Sbjct: 727 ELVEVIAAKQEKVLVFTQFRETTEPLAAFLGSIFGREGLVLHGGTPVARRRELVRRFQED 786 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + P + G GLNL + ++ F WW+ +E R + G +R V Sbjct: 787 EQTPFFVLSLKAGGAGLNLTA-ASHVIHFDRWWNPA-----VENQATDRAFRIGQQRNVL 840 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + T+++ + Q + +K + +L Sbjct: 841 VHKFICRGTVEDRIDQLIESKQQLVQDVLEG 871 >gi|162451641|ref|YP_001614008.1| SWF/SNF family helicase [Sorangium cellulosum 'So ce 56'] gi|161162223|emb|CAN93528.1| SWF/SNF family helicase [Sorangium cellulosum 'So ce 56'] Length = 1011 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 67/220 (30%), Gaps = 23/220 (10%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y E ++ S Q+ N E K+ L Sbjct: 769 LYQAALDEAMRRIEEAEGIERRGLVLSLLTVLKQICNHPAQCLGEAGPLAGRSGKLARLT 828 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNEG 107 ++E+A +V F RL + G ++ + + Sbjct: 829 EMLEEALAAGDRALVFTQFREMGDRLVRHLAPSLDAEVLFLHGGTPRLARDEMVRRFQDD 888 Query: 108 K--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL + + F WW+ +E R + G +RAV Sbjct: 889 PRGPHVFVLSLKAGGAGLNLTA-ASHVFHFDRWWNPA-----VEDQATDRAHRIGQRRAV 942 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ L+ T++E V + L K + ++ + + Sbjct: 943 QVHKLVCAGTVEEKVDRMLEQKRDLAAQVVGQGEAWITEL 982 >gi|120611497|ref|YP_971175.1| SNF2-like protein [Acidovorax citrulli AAC00-1] gi|120589961|gb|ABM33401.1| SNF2-related protein [Acidovorax citrulli AAC00-1] Length = 991 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 74/217 (34%), Gaps = 28/217 (12%) Query: 2 KQYHKFQREL------YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + + QG +K Q+ + K Sbjct: 731 ELYEAVRTGADKQVRRVLERQGFEGGLITILDALLKLRQVCCDPRLVKGLPDASGMESAK 790 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDK-DPCTIQE 103 + L ++ A ++V F L RL G T + ++ Sbjct: 791 LDRLAELLPPLVAEGRRVLVFSQFTGMLDLAGQRLDALRLPWLALTGATAPRQRASVVRR 850 Query: 104 WNE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + G P+L A + G GLNL + ++ WW+ + R + Sbjct: 851 FQDPSAEGSAPILLASLKAGGTGLNLTA-ADTVIHLDPWWNPAVME-----QASARAHRI 904 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R VF+++L+A+ +I+E +L+ K + D +L Sbjct: 905 GQDRPVFIHHLVAEGSIEERMLELQARKQALADGVLG 941 >gi|94986612|ref|YP_594545.1| SNF2 family DNA/RNA helicase [Lawsonia intracellularis PHE/MN1-00] gi|94730861|emb|CAJ54224.1| Superfamily II DNA/RNA helicases, SNF2 family [Lawsonia intracellularis PHE/MN1-00] Length = 1073 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 77/207 (37%), Gaps = 22/207 (10%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVY---YDEEKHWKEVHDEKIKAL 59 K + ++ D++ + I + +K Q+ + K +A Sbjct: 853 KKLRSQVLADIETKGIAKSQMSILDALLKLRQICCHPRLLKVDMPGFSIGSLASGKFEAF 912 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGK 108 + +I ++V F L ++ + G + D+ + N + Sbjct: 913 KDMIFDIVEGGHKVLVFSQFVQMLQLIKSWLQITDIPFCYLDGTSKDRLEQVDKFNNTPE 972 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IP+ + G GLNL + ++ + WW+ +E R + G R VF Y Sbjct: 973 IPVFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VESQATDRTHRIGQTRQVFSY 1026 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 LI QNT++E +L+ K + + ++ Sbjct: 1027 KLICQNTVEEKILKLQEMKRGVAEAII 1053 >gi|124515406|gb|EAY56916.1| DNA/RNA helicase, SNF2 family [Leptospirillum rubarum] Length = 882 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 71/209 (33%), Gaps = 22/209 (10%) Query: 4 YHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y K +EL L + A ++ Q+ N + + W K L Sbjct: 650 YRKTVKELESALDKTDGIARKGLVLAFLMRFKQICNHPSQWLGDGGWNPKDSGKFHRLAE 709 Query: 62 I--IEKANAAPIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTIQEWN-EG 107 I A +++ F R G + K ++ + + Sbjct: 710 IAETVAAKQEKMLIFTQFQEATLPLAAFLGGIFGRDGLVLHGGTPVGKRRELVRRFQEDE 769 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P + G GLNL + +V F WW+ +E R + G + V V Sbjct: 770 DTPFFVLSLKAGGTGLNLTA-ASHVVHFDRWWNPA-----VENQATDRAWRIGQHKNVLV 823 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + + T++E + + +R+K+ + +L Sbjct: 824 HKFLCRGTVEERIDKLIRSKTELVREVLE 852 >gi|302555175|ref|ZP_07307517.1| helicase [Streptomyces viridochromogenes DSM 40736] gi|302472793|gb|EFL35886.1| helicase [Streptomyces viridochromogenes DSM 40736] Length = 284 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 76/222 (34%), Gaps = 25/222 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH-----DEK 55 Y RE ++ A Q+ + + +E+H + K Sbjct: 54 LYEAVVRESMLAIETAEGIARRGMVLKLLTSLKQICDHPALFLKEEHAQSGDRLAARSGK 113 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQE 103 + L+ +++ +V + + G + + + Sbjct: 114 LALLDELLDTLLAEDGSALVFTQYVGMARLITSHLATRAVPVDLLHGGTPVPERERMVDR 173 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G P+L + G GLNL G+ +V F WW+ +E R + G + Sbjct: 174 FQAGSTPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEEQATDRAYRIGQTQ 227 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V+ LI + T+++ + + L K + D +L + + + Sbjct: 228 PVQVHRLITEGTVEDRIAEMLEAKRALADAILGSGESALTEL 269 >gi|317484163|ref|ZP_07943092.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924512|gb|EFV45669.1| SNF2 family domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 1343 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 74/212 (34%), Gaps = 27/212 (12%) Query: 4 YHKFQRELYCDLQGENIE------AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y +R L+ E F+ ++ +K + V D + K+ Sbjct: 1125 YEALRRNALASLEAAKQEDAEGSQKFSILTELMKLRRACCAPVLIDPGTS---LTGAKLS 1181 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWN 105 A ++E+ +V F L+ + + + + Sbjct: 1182 AFMELVEELVRGGHKALVFSQFVGCLSEARRLLDAAGYGYQYLDGSTPDRERQAAVAAFQ 1241 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 GK L + G GLNL + ++ WW+ +E R + G +R V Sbjct: 1242 SGKGDLFLISLKAGGQGLNLTA-ADYVIHLDPWWNPA-----VEDQASDRAYRLGQQRPV 1295 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+A+ T++E +L+ R+K + +L Sbjct: 1296 TVYRLVARGTVEESILKLHRSKRALAADVLEG 1327 >gi|303257421|ref|ZP_07343434.1| SNF2/helicase domain protein [Burkholderiales bacterium 1_1_47] gi|302859778|gb|EFL82856.1| SNF2/helicase domain protein [Burkholderiales bacterium 1_1_47] Length = 1361 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 77/209 (36%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + LQ E I + K Q A D + KI+ Sbjct: 1143 LAIYENIRTRTLSGLQSEKINPIEALMALTKLRQAACSPELVD---KHLTIPSSKIRVFL 1199 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK 108 ++ + N +V F S LA +++ + ++ + G Sbjct: 1200 ELVRELKENKHRALVFSQFTSFLALVRQALDKAGIEYLYLDGSVPAAQRKKLVETFQNGD 1259 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +PL + G GLNL + ++ WW+ +E R + G KR V +Y Sbjct: 1260 MPLFLISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQASDRAYRIGQKRPVTIY 1313 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI++ T+++ +L+ +TK + D LL Sbjct: 1314 KLISEKTVEQKILELHKTKKNLADALLEG 1342 >gi|331090252|ref|ZP_08339139.1| hypothetical protein HMPREF1025_02722 [Lachnospiraceae bacterium 3_1_46FAA] gi|330401871|gb|EGG81446.1| hypothetical protein HMPREF1025_02722 [Lachnospiraceae bacterium 3_1_46FAA] Length = 453 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 118/201 (58%), Gaps = 8/201 (3%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + ++++ + +++A N+A+ + K LQ+ANGAV YDE + +HD+K+ ALE Sbjct: 250 KLYRQKEKDMLLPFEDGDVDAVNAAALSGKLLQMANGAV-YDENHKVRHIHDKKLDALED 308 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE AN P++VAY + DL R+ K I++W EGKIP+ HPAS GH Sbjct: 309 LIEAANGKPVLVAYWYQHDLDRIV--ERFKAVPLKAAGDIRKWKEGKIPVAAIHPASAGH 366 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GG+IL++F L W LE + Q R+ + G + V +Y++I + T+DE + Sbjct: 367 GLNIQDGGHILIWFGLTWSLELYMQCNARLW-----RQGQRETVMIYHIINKGTLDEDAM 421 Query: 182 QRLRTKSTIQDLLLNALKKET 202 + L K Q +++A+K Sbjct: 422 RSLEQKDCGQSAIIDAVKARI 442 >gi|255524582|ref|ZP_05391536.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|296185768|ref|ZP_06854175.1| SNF2 family [Clostridium carboxidivorans P7] gi|255511735|gb|EET88021.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|296049596|gb|EFG89023.1| SNF2 family [Clostridium carboxidivorans P7] Length = 929 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 27/220 (12%) Query: 2 KQY----HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + E+ +++ + I S + Q+ + E E + K Sbjct: 704 KVYAAYLQQAKEEVNNEIRDKGINKSKIKILSIITRLRQICCDPSTFIENY---EGDNGK 760 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 ++AL+ I++ + I++ F S L + ++E Sbjct: 761 MEALKDIVQNNVNDGHKILLFSQFTSVLKNIGEMFKSENIKYMYLDGSVKAEDRGEIVRE 820 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+IP+ + G GLNL +I++ + WW+ +E R + G K+ Sbjct: 821 FNEGEIPIFLISLKAGGTGLNLTS-ADIVIHYDPWWNPA-----VENQASDRAHRIGQKK 874 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V V LIA+ TI+E + + K I + ++ E I Sbjct: 875 TVEVIRLIAKGTIEEKIHKIQEKKKEIINDVIEENAGEEI 914 >gi|257064183|ref|YP_003143855.1| DNA/RNA helicase, superfamily II, SNF2 family [Slackia heliotrinireducens DSM 20476] gi|256791836|gb|ACV22506.1| DNA/RNA helicase, superfamily II, SNF2 family [Slackia heliotrinireducens DSM 20476] Length = 1082 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 78/222 (35%), Gaps = 28/222 (12%) Query: 1 MKQY---HKFQRELYCDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHD 53 ++ Y + R+ E+++ ++ + Q+ Sbjct: 857 LELYRAHEQMLRQKIASQTDEDMKDGTQKIEVLAELMHLRQICCDPHLM---TSRYNGPA 913 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLD-KDPCTI 101 K+ AL +I ++V F S L R+ G T K + Sbjct: 914 AKLDALSDLIGSCMDAGQKMLVFSQFKSFLDIIADRLDEQRIAHFAITGDTPSAKRLELV 973 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +N P+ + G GLNL G ++++ WW+ R + G Sbjct: 974 ERFNADDTPVFLISLKAGGTGLNLT-GASVVIHADPWWNAAAQ-----NQATDRAHRIGQ 1027 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V V+ +IA++TI+E ++ K + + ++ A + ++ Sbjct: 1028 THVVSVHKIIAKDTIEERIMALQDAKRDLAEQIIGATEGSSL 1069 >gi|196233486|ref|ZP_03132329.1| Non-specific serine/threonine protein kinase [Chthoniobacter flavus Ellin428] gi|196222482|gb|EDY17009.1| Non-specific serine/threonine protein kinase [Chthoniobacter flavus Ellin428] Length = 815 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 22/211 (10%) Query: 3 QYHKFQR---ELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + DL G + ++ Q ++ E KI Sbjct: 593 VYAELVKATRRTLSDLAGGKDQGKARIAMLTALLRLRQACCDLRLLGQDDIESEQASAKI 652 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNE 106 + L ++ + +++ F S L L+ + + + Sbjct: 653 ELLRELLAEAVDGGHRVLIFSQFVSMLTLLREALTEDEIPYCYLDGSTKDRAAEVDRFQA 712 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ P + G GLNL + ++ F WW+ +E R + G ++ V Sbjct: 713 GETPAFLISLKAGGVGLNLTA-ADTVIHFDPWWNPA-----VEAQATDRAHRIGQQKVVT 766 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LIA++T++E +L + K + D + + Sbjct: 767 AYKLIARDTVEEKILALQQKKRALVDATIES 797 >gi|171915800|ref|ZP_02931270.1| probable helicase [Verrucomicrobium spinosum DSM 4136] Length = 896 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 76/202 (37%), Gaps = 18/202 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-VII 63 K RE D QG +K Q+ E K K + L ++ Sbjct: 681 DKRVREAIAD-QGIEKSQLIVLDALLKLRQVCCHPSLLKTESAKKVETSAKTEYLMDEML 739 Query: 64 EK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNEGKIPLLF 113 + I++ F S L L++ + ++++ G +P+ Sbjct: 740 PELIEEGRRILIFSQFTSMLDILERMLKERGIRYVKLTGSTEDRMKPVEQFQNGDMPVFL 799 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+ L + ++ + WW+ IE R + G K+ VFV+ LI Q Sbjct: 800 ISLKAGGVGITLTA-ADTVIHYDPWWNPA-----IEAQATDRAYRIGQKKPVFVHKLICQ 853 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 TI+E +++ R KS + + LL Sbjct: 854 GTIEERIVEMQRRKSALINGLL 875 >gi|209696433|ref|YP_002264364.1| putative helicase [Aliivibrio salmonicida LFI1238] gi|208010387|emb|CAQ80731.1| putative helicase [Aliivibrio salmonicida LFI1238] Length = 1284 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 73/208 (35%), Gaps = 21/208 (10%) Query: 3 QYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y ++E +L+ + + K Q+ + + K+ + Sbjct: 1067 AYEAVRKESLANLKSASSRGVVEVFAALTKLRQICCDVSLVFD--SMQGEASTKLSEAQS 1124 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKI 109 +IE+ ++V F L R + + I + +G Sbjct: 1125 LIEEALDGDHKVLVFSQFVGVLKRFSAQLTESNISFSYLDGKLSTKQRQAAIDSFKDGTN 1184 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + ++ WW+ +E R + G ++ V VY Sbjct: 1185 SVFLISLKAGGTGLNLTE-ADTVIHIDPWWNPA-----VEDQASDRAYRMGQQKPVTVYR 1238 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ ++TI+E ++ K + D +L+A Sbjct: 1239 LVTKDTIEEKIIALHHDKRDLADQVLSA 1266 >gi|194364294|ref|YP_002026904.1| Non-specific serine/threonine protein kinase [Stenotrophomonas maltophilia R551-3] gi|194347098|gb|ACF50221.1| Non-specific serine/threonine protein kinase [Stenotrophomonas maltophilia R551-3] Length = 1104 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 75/211 (35%), Gaps = 22/211 (10%) Query: 3 QYH----KFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++++ + + + +K Q+ E + K+ Sbjct: 863 LYETVRAAMEKQVREAISDSGLARSHIRVLDALLKLRQVCCDPRLLPGETPARNAGSAKL 922 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNE 106 + L ++ I++ F LA + + +Q + + Sbjct: 923 ELLREMLPSMVEEGRRILLFSQFTGMLALIAQALDGLGLAYVTLTGDTQDRVTPVQRFMQ 982 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++PL + G GLNL + ++ F WW+ E R + G ++ VF Sbjct: 983 GEVPLFLISLKAGGVGLNLTA-ADTVIHFDPWWNPAA-----ENQASDRAHRIGQQQPVF 1036 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA +I+E + + K+ + + +L Sbjct: 1037 VYRLIAAGSIEERIAELQERKAMLAESILEG 1067 >gi|256375189|ref|YP_003098849.1| Non-specific serine/threonine protein kinase [Actinosynnema mirum DSM 43827] gi|255919492|gb|ACU35003.1| Non-specific serine/threonine protein kinase [Actinosynnema mirum DSM 43827] Length = 1028 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 65/210 (30%), Gaps = 22/210 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ + G + K Q+ N + K+ LE Sbjct: 798 LYQAVLDDMLAKVDGSEGQERRGLVLASLSKLKQVCNHPAQLLGDGSRVAGRSGKVNRLE 857 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWN-E 106 ++E+ + + F + L G ++ + E Sbjct: 858 EVLEEVLADGDKALCFTQFTEFGSLLAPHLSARFDTDVLFLHGGTPKRARDAMVERFQGE 917 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + + G GLNL N ++ WW+ +E R + G +R V Sbjct: 918 GGPSVFLLSLKAGGTGLNLTA-ANHVIHLDRWWNPA-----VEDQATDRAFRIGQRRHVQ 971 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V + T++E + + + K + +++ Sbjct: 972 VRKFVCAGTVEERIDRMVEQKRGLARMVVG 1001 >gi|300909460|ref|ZP_07126921.1| SNF2 domain protein [Lactobacillus reuteri SD2112] gi|300893325|gb|EFK86684.1| SNF2 domain protein [Lactobacillus reuteri SD2112] Length = 451 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 117/198 (59%), Gaps = 8/198 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +L QG+ I+A N+AS + K Q+ANG V YD+++ ++H K+ ALE + Sbjct: 254 IYDELNAQLVVSAQGKQIDALNAASLSNKLCQMANGCV-YDDQQQIIQIHQRKLDALEDL 312 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P++VAY F DL +++ K P IQ+WN GKIPL HPAS GHG Sbjct: 313 VEAANGKPVLVAYWFKHDLIQIK--SRFKVREIKTPRDIQDWNAGKIPLALIHPASAGHG 370 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ GG L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L Sbjct: 371 LNLQAGGATLIWYGLTWSLELYQQTNARLW-----RQGQRQPVVIHHIITEGTIDENILA 425 Query: 183 RLRTKSTIQDLLLNALKK 200 L+ K Q L+NA+K Sbjct: 426 ALKRKDKTQLALINAVKA 443 >gi|331697415|ref|YP_004333654.1| SNF2-like protein [Pseudonocardia dioxanivorans CB1190] gi|326952104|gb|AEA25801.1| SNF2-related protein [Pseudonocardia dioxanivorans CB1190] Length = 1053 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 67/213 (31%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++G + A N + K Q+ N + K+ LE Sbjct: 806 LYRTVVDDMLDRIEGTDGIARRGNVLAAMAKLKQVCNHPAQLLHDGSPIGRRSGKVTRLE 865 Query: 61 VIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 I+E ++ + + G + ++ + Sbjct: 866 EILESILAEGDKVLCFTQYAEFASMLVPHLSGRFDQEVLYLHGGTPKKRRDEMVERFQSP 925 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + + G GL L + +V WW+ +E R + G +R V Sbjct: 926 DGPAIFLLSLKAGGTGLTLTA-ASHVVHLDRWWNPA-----VENQATDRAFRIGQRRNVQ 979 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V L+ T++E + + +K + ++ + Sbjct: 980 VRTLVCPGTVEERIDDLITSKKALSGKVIGDGE 1012 >gi|323487763|ref|ZP_08093021.1| non-specific serine/threonine protein kinase [Planococcus donghaensis MPA1U2] gi|323398497|gb|EGA91285.1| non-specific serine/threonine protein kinase [Planococcus donghaensis MPA1U2] Length = 1047 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 27/212 (12%) Query: 2 KQYH----KFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + +++ + L + + + QL + E K Sbjct: 824 KLYAAYLAELKQDAFKHLNKDSFQKNRIRILAGLTRLRQLCCHPALFVEGYD---GGSAK 880 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 L ++ + ++V F L + + Sbjct: 881 FDQLMELLTECRATGRRVLVFSQFTQMLGIIGNQLAKEGVPYFYLDGQTPPQERVELCRR 940 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + +V + LWW+ Q R + G ++ Sbjct: 941 FNEGQGELFLISLKAGGTGLNLT-GADTVVLYDLWWNPAVEQ-----QAADRAHRMGQEK 994 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V LIA+ TI+E + + K + D ++ Sbjct: 995 EVQVVRLIAKGTIEEKINELQMKKKNLIDDVI 1026 >gi|229824793|ref|ZP_04450862.1| hypothetical protein GCWU000182_00142 [Abiotrophia defectiva ATCC 49176] gi|229791122|gb|EEP27236.1| hypothetical protein GCWU000182_00142 [Abiotrophia defectiva ATCC 49176] Length = 1073 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 74/209 (35%), Gaps = 23/209 (11%) Query: 5 HKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 ++++ ++ + + Q+ + E E K+ L + Sbjct: 857 EDMKKKINNEINKNGFEKSRMMILASLTRLRQICCHPSTFLENY---EGGSGKLSLLLQL 913 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 ++ + I+V F S L + + ++ +N G Sbjct: 914 VQNAVESGHRILVFSQFTSMLNLVEEEFKKLKISYYYLDGSTPIAQRSEDVKAFNNGSRE 973 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL G ++++ + WW+ +E R + G K +V V L Sbjct: 974 VYLISLKAGGTGLNL-VGADMVIHYDPWWNPA-----VEDQATDRVYRIGQKNSVNVVKL 1027 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I + TI+E + + K + D ++ A + Sbjct: 1028 ITKGTIEEKIYKLQEKKKNLADSVIKAGE 1056 >gi|318081201|ref|ZP_07988533.1| helicase [Streptomyces sp. SA3_actF] Length = 770 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 71/211 (33%), Gaps = 23/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYY---DEEKHWKEVHDEKIK 57 Y RE ++ + Q+ N Y + K+ Sbjct: 541 LYEAVVRESLAAIESAEGMSRRGLVLRLITSLKQICNHPAQYLKEHPDTARLPGRSGKLD 600 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN 105 AL+ ++ ++V + L G +D + + Sbjct: 601 ALDELLGTILAEDGSVLVFTQYVRMARLLTAHLAAQAVPAGLLHGGTPVDARDQLVDRFQ 660 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G +P+L + G GLNL G+ +V + WW+ +E R + G R V Sbjct: 661 SGALPVLVLSLKAAGTGLNLTRAGH-VVHYDRWWNPA-----VEDQATDRAHRIGQTRHV 714 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ L+A+ T+++ + + K + D +L Sbjct: 715 QVHRLLAEGTVEDRIADLVAGKQALADAVLG 745 >gi|318057744|ref|ZP_07976467.1| helicase [Streptomyces sp. SA3_actG] Length = 939 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 71/211 (33%), Gaps = 23/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYY---DEEKHWKEVHDEKIK 57 Y RE ++ + Q+ N Y + K+ Sbjct: 710 LYEAVVRESLAAIESAEGMSRRGLVLRLITSLKQICNHPAQYLKEHPDTARLPGRSGKLD 769 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN 105 AL+ ++ ++V + L G +D + + Sbjct: 770 ALDELLGTILAEDGSVLVFTQYVRMARLLTAHLAAQAVPAGLLHGGTPVDARDQLVDRFQ 829 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G +P+L + G GLNL G+ +V + WW+ +E R + G R V Sbjct: 830 SGALPVLVLSLKAAGTGLNLTRAGH-VVHYDRWWNPA-----VEDQATDRAHRIGQTRHV 883 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ L+A+ T+++ + + K + D +L Sbjct: 884 QVHRLLAEGTVEDRIADLVAGKQALADAVLG 914 >gi|284053180|ref|ZP_06383390.1| SNF2-related helicase [Arthrospira platensis str. Paraca] Length = 1068 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 73/221 (33%), Gaps = 30/221 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-------DEEKHWKEVHD 53 Y K E +++ VK Q+ N + E + Sbjct: 825 LYQKLVDESLSEIESSTGIQRRGMILGLLVKLKQVCNHPLLLGAKTKAKKEMPTLNPGYS 884 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCT 100 K++ L ++E+ + ++ F L R G + Sbjct: 885 GKLQRLNEMLEELISEGDRALIFTQFAEWGKLLKPYLEAKLNREVLFLYGGSRKLQREQM 944 Query: 101 IQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + P++ + G GLNL N + F WW+ +E R + Sbjct: 945 VDRFQQDPQGPPVMILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATDRVFR 998 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G R V V+ + T++E + + +K + + ++++ + Sbjct: 999 IGQTRNVQVHKFVCTGTLEEKIHDLIESKQALAEQVVSSGE 1039 >gi|296163436|ref|ZP_06846189.1| SNF2-related protein [Burkholderia sp. Ch1-1] gi|295886324|gb|EFG66189.1| SNF2-related protein [Burkholderia sp. Ch1-1] Length = 1117 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 72/214 (33%), Gaps = 22/214 (10%) Query: 3 QYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++ + + + + +K Q+ + + K+ Sbjct: 873 LYETVRAAMHEKVRAAVTAKGLARSHIVVLEALLKLRQVCCDPRLVKISQAARIKESAKL 932 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNE 106 L ++ + I++ F L + A + I+ + + Sbjct: 933 ALLLEMLPELIEEGRRILLFSQFTGMLELIAAALNEAGIPYVVLTGDTTDRRTPIRRFQQ 992 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +PL + G GLNL + ++ + WW+ +E R + G + VF Sbjct: 993 RAVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQATDRAHRLGQDKPVF 1046 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 VY LI +++E ++ K+ + D +L+ Sbjct: 1047 VYKLITAGSVEEKIVAMQEQKAALADAILSEDAA 1080 >gi|119943907|ref|YP_941587.1| SNF2-related protein [Psychromonas ingrahamii 37] gi|119862511|gb|ABM01988.1| SNF2-related protein [Psychromonas ingrahamii 37] Length = 1080 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 22/215 (10%) Query: 3 QYHKFQ---RELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + E DL E A + +K Q E K+ Sbjct: 855 LYESIRVTMEEKVRDLLKEKGLARSRIEFLDALLKLRQACCDPRLVKLEHAKNIKSSAKL 914 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNE 106 L ++ + I++ F L ++++ I ++ Sbjct: 915 DYLMGVLPEMIEEGRRILIFSQFAQMLGLIEQSLLASDIDFVKLTGQTRNRSEVIDKFQN 974 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G +P+ + G GLNL + ++ + WW+ +E R + G + VF Sbjct: 975 GNVPIFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQATDRAYRIGQDKPVF 1028 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY LI ++T++E VL K + D + + ++E Sbjct: 1029 VYKLICEHTVEERVLALQTRKQKLADSVYGSEQEE 1063 >gi|227872572|ref|ZP_03990908.1| helicase [Oribacterium sinus F0268] gi|227841573|gb|EEJ51867.1| helicase [Oribacterium sinus F0268] Length = 449 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 9/205 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y + ++ + L+ I A ++ T K Q ANGA+ YDE+K +HD K++ Sbjct: 248 LKAYQELEKNMVLSLEESEITAVSAGVLTNKLSQCANGAI-YDEDKVVNHIHDCKLERFT 306 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPA 117 ++E+ N +V Y+F D R+ KA + ++ P ++WN+GKI +L AHPA Sbjct: 307 ELVEELNGESALVFYNFKHDKDRILKALEKSGLEVREFKSPKDEEDWNKGKIDILLAHPA 366 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S +G+NLQYGG +++FSL W E + R + G ++ V V+ L+ +T+D Sbjct: 367 STAYGINLQYGGRNIIWFSLPWSYELY-----AQANARLFRQGQEKPVIVHELLCTDTVD 421 Query: 178 ELVLQRLRTKSTIQDLLLNALKKET 202 + + L K Q+ +L ALK Sbjct: 422 HDIKKSLSEKGQNQEDVLRALKARL 446 >gi|296445439|ref|ZP_06887396.1| SNF2-related protein [Methylosinus trichosporium OB3b] gi|296257005|gb|EFH04075.1| SNF2-related protein [Methylosinus trichosporium OB3b] Length = 890 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 74/215 (34%), Gaps = 23/215 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y EL L+ + + + ++ Q+ N + + ++ K L Sbjct: 656 LYEVAVDELEQRLKQADDDIARRGLVLAMLMRLKQICNHPSQWLSDGAYEPAQSGKFARL 715 Query: 60 EVI--IEKANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWN- 105 I + ++V F +A R + K ++++ Sbjct: 716 AEIAETVASRQEKLLVFTQFKEIIAPLERLLASVFGRSGLVLHGDTPVAKRKDLVKKFQE 775 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + IP + G GL L + + F WW+ +E R + G KR V Sbjct: 776 DETIPFFVLSLKAGGSGLTLTA-ASHVAHFDRWWNPS-----VENQATDRAFRIGQKRNV 829 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ + + TI+E + Q + +K + +L ++ Sbjct: 830 LVHKFVCRGTIEERIDQLIESKRQLAQDVLGGGQE 864 >gi|209525614|ref|ZP_03274152.1| Non-specific serine/threonine protein kinase [Arthrospira maxima CS-328] gi|209493947|gb|EDZ94264.1| Non-specific serine/threonine protein kinase [Arthrospira maxima CS-328] Length = 1058 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 73/221 (33%), Gaps = 30/221 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-------DEEKHWKEVHD 53 Y K E +++ VK Q+ N + E + Sbjct: 815 LYQKLVDESLSEIESSTGIQRRGMILGLLVKLKQVCNHPLLLGAKTKAKKESPTLNPSYS 874 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCT 100 K++ L ++E+ + ++ F L R G + Sbjct: 875 GKLQRLNEMLEELISEGDRALIFTQFAEWGKLLKPYLEAKLNREILFLYGGTRKLQREQM 934 Query: 101 IQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + P++ + G GLNL N + F WW+ +E R + Sbjct: 935 VDRFQQDPQGPPVMILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATDRVFR 988 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G R V V+ + T++E + + +K + + ++++ + Sbjct: 989 IGQTRNVQVHKFVCTGTLEEKIHDLIESKQALAEQVVSSGE 1029 >gi|158339003|ref|YP_001520180.1| SNF2 family helicase [Acaryochloris marina MBIC11017] gi|158309244|gb|ABW30861.1| SNF2 family helicase [Acaryochloris marina MBIC11017] Length = 1091 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 72/217 (33%), Gaps = 25/217 (11%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIK 57 K Y +E + + VK Q+ N Y +E K+K Sbjct: 853 KLYQTTVQESLDAVDAAKGIQRRGIILATLVKLKQICNHPAQYLHEETLDLDLQRSGKLK 912 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEW 104 L+ ++E+ ++ F L R G + + I + Sbjct: 913 RLQEMLEELLDEGDRALIFTQFAELGKLLQQYLQTKLQRETLLLYGGSSKKQRESMIDRF 972 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL N + F WW+ +E R + G Sbjct: 973 QHDPQGPRIFILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATDRVFRIGQT 1026 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R V V+ + T++E + ++L +K + + ++ A + Sbjct: 1027 RNVQVHKFVCTGTLEERIHEQLESKKALAEQVVGAGE 1063 >gi|168701069|ref|ZP_02733346.1| Non-specific serine/threonine protein kinase [Gemmata obscuriglobus UQM 2246] Length = 894 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 73/211 (34%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +L L+G + ++ ++ Q+ N + K + L Sbjct: 660 LYQHAVDDLARQLEGTDGIQRRGIVLAQLMRLKQICNHPAQVAGTGDYAADRSGKFRRLA 719 Query: 61 VIIEKANAA--PIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 I E+ + ++V F R G ++ K + ++ E Sbjct: 720 EIAEEIASRQEKVLVFTQFREIADPLAEFLATLFGRSGLVLHGGTSVKKRKEFVDQFQRE 779 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + G GLNL + +V F WW+ IE R + G K+ V Sbjct: 780 DGPPFFVLSLKAGGTGLNLTAAAH-VVHFDRWWNPA-----IENQATDRAFRIGQKKNVL 833 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + T++E + + + KS + D + Sbjct: 834 VHKFICRGTVEERIDEMIARKSRVADEAIGG 864 >gi|304406180|ref|ZP_07387837.1| SNF2 helicase associated domain protein [Paenibacillus curdlanolyticus YK9] gi|304344764|gb|EFM10601.1| SNF2 helicase associated domain protein [Paenibacillus curdlanolyticus YK9] Length = 1110 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 75/213 (35%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K ++E L ++ + + + Q+ + E+ K Sbjct: 887 KLYTAYLAKLRQETLKHLDEDDFGRQRIKILAGITRLRQICCHPGLFVEDYR---GGSAK 943 Query: 56 IKALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQE 103 ++ L I+ + +++ F L ++ ++ Q Sbjct: 944 LEQLLDIVEDCRGAGKRMLLFSQFTGMLGIIREELGVRGVPLFYLDGSTPPEERAELCQR 1003 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLNL G + ++ + +WW+ Q R + G K Sbjct: 1004 FNAGEKEVFLISLKAGGTGLNLT-GADTVIMYDMWWNPAVEQ-----QAADRAHRIGQKN 1057 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+AQ T+++ + K + D ++ Sbjct: 1058 VVQVIRLVAQGTVEDKMHALQERKKQLIDEVIQ 1090 >gi|257869721|ref|ZP_05649374.1| Snf2 family protein [Enterococcus gallinarum EG2] gi|257803885|gb|EEV32707.1| Snf2 family protein [Enterococcus gallinarum EG2] Length = 1074 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 87/221 (39%), Gaps = 26/221 (11%) Query: 2 KQYHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + R++ ++ + A + + + Q+ + E+ E K+ Sbjct: 849 KIYLAYLRQMREEIAQMDTAAFRKNRISILAGLTRLRQICCDPRLFVEDY---EGTSGKL 905 Query: 57 KALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW 104 + ++ +I+ K N +++ F S L+ ++ + + + Sbjct: 906 EQVKDLIQAAKENGRRVLLFSQFTSMLSIIEEELAQEGIETFYLRGSTPPQERLSMVDAF 965 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G+ + + G GLNL G + ++ + LWW+ +E R + G K+ Sbjct: 966 NNGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRIGQKKV 1019 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V+ +IA+ TI+E + + K + ++ + + + Sbjct: 1020 VEVWRMIAEGTIEERMDALQQEKRELFQKVIQGNEAQLNQM 1060 >gi|91793580|ref|YP_563231.1| SNF2-related [Shewanella denitrificans OS217] gi|91715582|gb|ABE55508.1| SNF2-related [Shewanella denitrificans OS217] Length = 1088 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 78/206 (37%), Gaps = 18/206 (8%) Query: 7 FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +++L + + + + +K Q E+ + K+ L + Sbjct: 874 MEKKLRELFAQKGVSSSHIEFLDALLKLRQACCDPRLVKLEQAQNVKSNAKLTWLTENLT 933 Query: 65 KA--NAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPLLFA 114 + I++ F L+ +++ + I ++ EG+ P+ Sbjct: 934 EMVEEGRKILIFSQFTGMLSLIEEELQRLNIDYSLLTGKTRSRQTQIDDFQEGRKPVFLI 993 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + ++ F WW+ ER R + G VFVY LIAQ Sbjct: 994 SLKAGGTGLNLTT-ADTVIHFDPWWNPAA-----ERQATDRAHRIGQLNPVFVYKLIAQG 1047 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKK 200 T++E + + + K + D +L+ ++ Sbjct: 1048 TVEEKIHEMQQHKQGLADSILSDKEQ 1073 >gi|269120031|ref|YP_003308208.1| SNF2-related protein [Sebaldella termitidis ATCC 33386] gi|268613909|gb|ACZ08277.1| SNF2-related protein [Sebaldella termitidis ATCC 33386] Length = 458 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 11/206 (5%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + ++E+ +L GE I+ ++A+ T K LQL+NGAVY ++ K EVH+ KI+A Sbjct: 254 KAYDELEKEMILELIETGETIDVTSAAALTNKLLQLSNGAVYDEDRKVH-EVHNCKIEAF 312 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHP 116 ++E N P +V Y F D R++KA + + ++ + +WN +I +L +HP Sbjct: 313 MELVEALNGQPALVFYSFQHDKDRIKKALSKLKLRVRELKTDQDVTDWNNREIDILLSHP 372 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 AS +GLNLQ GGN +++F L W LE +Q R + G VF+++LI + T Sbjct: 373 ASSAYGLNLQRGGNHIIWFGLNWSLELYQ-----QANKRLHRQGQTEKVFIHHLITEGTR 427 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 D V+ L K IQ+ LLN+LK Sbjct: 428 DTDVMAALGDKGDIQESLLNSLKARI 453 >gi|38637850|ref|NP_942824.1| helicase superfamily protein II [Ralstonia eutropha H16] gi|32527188|gb|AAP85938.1| putative helicase, superfamily II [Ralstonia eutropha H16] Length = 1106 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 75/214 (35%), Gaps = 22/214 (10%) Query: 3 QYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y Q ++ + + + + +K Q+ ++ + K+ Sbjct: 862 LYETVRAAMQEKVRAAVAAKGLARSHIIVLEALLKLRQVCCDPRLVKIKEAARIKESAKL 921 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNE 106 L ++ + I++ F S L + ++ + + Sbjct: 922 DLLLHMLPELIEEGRRILLFSQFTSMLDLIAAALRNAGIPYVMLTGDTTDRITPVERFQQ 981 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++PL + G GLNL + ++ + WW+ +E R + G + VF Sbjct: 982 GEVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQATDRAHRLGQDKPVF 1035 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 VY LI +++E ++ K+ + + +L+ Sbjct: 1036 VYKLITGGSVEEKIVAMQAQKAALAEAILSEDAA 1069 >gi|242280237|ref|YP_002992366.1| SNF2-related protein [Desulfovibrio salexigens DSM 2638] gi|242123131|gb|ACS80827.1| SNF2-related protein [Desulfovibrio salexigens DSM 2638] Length = 1069 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 21/206 (10%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKALE 60 + + ++ D+ + + + +K Q+ D + K A + Sbjct: 850 KRLKDQVLRDVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDMPGLSTNLPSGKFDAFK 909 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKI 109 +I ++V F L ++ + G + D+ + + I Sbjct: 910 DLIFDIVEGGHKVLVFSQFVQMLHVIRSWLTIKDIPFAYLDGSSKDRFEQVDRFNDSPDI 969 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL + ++ + WW+ +E R + G KR VF Y Sbjct: 970 PIFLISLKAGGTGLNLTS-ADYVIHYDPWWNPA-----VENQATDRTHRIGQKRQVFAYK 1023 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 +I QNT++E +L K ++ D ++ Sbjct: 1024 MICQNTVEEKILGLQEMKKSVADAII 1049 >gi|108763874|ref|YP_633501.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108467754|gb|ABF92939.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622] Length = 1083 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 71/217 (32%), Gaps = 23/217 (10%) Query: 3 QYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + E + + + ++ Q+ K+ Sbjct: 857 LYREVLEESRRKVHESIEKVGFKRSRVSILAALMRLRQVCCDPRLLKMPPGTLMPPSAKV 916 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWN 105 + ++E A +V F L L + + GRT D+ + N Sbjct: 917 ERFLQLVEDLVAEGHRALVFSQFTEMLELLKQEADKKGLRYLYLDGRTKDRMGKVDEYNN 976 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 PL F + G GLNL + ++ F WW+ +E R + G RAV Sbjct: 977 PDGPPLFFISLKAGGTGLNLTA-ADYVIHFDPWWNPA-----VEDQATDRTHRIGQTRAV 1030 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Y LI + T++E +L R K + +L E Sbjct: 1031 ISYKLITRGTVEEKILALQRRKRELAAGVLGGDGDEM 1067 >gi|24373219|ref|NP_717262.1| Snf2 family protein [Shewanella oneidensis MR-1] gi|24347445|gb|AAN54706.1|AE015611_4 Snf2 family protein [Shewanella oneidensis MR-1] Length = 1070 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++++ + + + +K Q E+ K ++ K+ Sbjct: 848 LYESIRLSMEKKIRELFATQGVAGSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAKL 907 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNE 106 L + + I++ F S L +++ I ++ E Sbjct: 908 NWLSQNLPEMVQEGRKILIFSQFTSMLILIEELLQSLEIDYSKLTGQTRLRQVQIDKFQE 967 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ ER R + G + VF Sbjct: 968 GDTPVFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ERQATDRAHRIGQENPVF 1021 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA+ T++E + + + K + D +L Sbjct: 1022 VYKLIAEGTVEEKIQEMQQHKQGLADSILEG 1052 >gi|217974039|ref|YP_002358790.1| Non-specific serine/threonine protein kinase [Shewanella baltica OS223] gi|217499174|gb|ACK47367.1| Non-specific serine/threonine protein kinase [Shewanella baltica OS223] Length = 1073 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +++L + + + + +K Q E+ K + K+ Sbjct: 851 LYESIRLVMEKKLRDLFATQGVGSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKSNAKL 910 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNE 106 L+ + + I++ F S L+ ++ I ++ E Sbjct: 911 DWLKQNLPEMVQEGRKILIFSQFTSMLSLIEAELVDLGLDYSKLTGQTRLRQAQIDKFQE 970 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ E+ R + G + VF Sbjct: 971 GDTPVFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----EKQATDRAHRIGQDKPVF 1024 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA+ T++E + + + K ++ D +L Sbjct: 1025 VYKLIAEGTVEEKIQEMQQHKQSLADSILEG 1055 >gi|152999998|ref|YP_001365679.1| non-specific serine/threonine protein kinase [Shewanella baltica OS185] gi|151364616|gb|ABS07616.1| Non-specific serine/threonine protein kinase [Shewanella baltica OS185] Length = 1073 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +++L + + + + +K Q E+ K + K+ Sbjct: 851 LYESIRLVMEKKLRDLFATQGVGSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKSNAKL 910 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNE 106 L+ + + I++ F S L+ ++ I ++ E Sbjct: 911 DWLKQNLPEMVQEGRKILIFSQFTSMLSLIEAELVDLGLDYSKLTGQTRLRQAQIDKFQE 970 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ E+ R + G + VF Sbjct: 971 GDTPVFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----EKQATDRAHRIGQDKPVF 1024 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA+ T++E + + + K ++ D +L Sbjct: 1025 VYKLIAEGTVEEKIQEMQQHKQSLADSILEG 1055 >gi|302607772|emb|CBW45684.1| putative helicase [Streptomyces pristinaespiralis] Length = 936 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 86/218 (39%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHW-KEVHDEKIKAL 59 Y K +E+ ++ A + Q+ N ++ ++ K++ L Sbjct: 710 LYRKHAQEVMDRIRASQGIARSGLVLKLLTGLKQICNHPAHFLKQDDTALSGRSGKLELL 769 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ ++V + + L++ G + + +Q + +G Sbjct: 770 DELLDTITAEGGAVLVFTQYVAMAKLLERHLRERGIGAQLLHGGTPVPRREELVQRFQDG 829 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V + WW+ +E R + G R+V V Sbjct: 830 EVPVFLLSLKAAGTGLNLTR-ADHVVHYDRWWNPA-----VEAQATDRAYRIGQTRSVQV 883 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + +IA+ TI++ + L +K + D +L + + + Sbjct: 884 HKMIAEGTIEDRIAALLESKKDLADAVLGSGEGALTEL 921 >gi|297196538|ref|ZP_06913936.1| SNF2/RAD54 family helicase [Streptomyces pristinaespiralis ATCC 25486] gi|297153265|gb|EFH32249.1| SNF2/RAD54 family helicase [Streptomyces pristinaespiralis ATCC 25486] Length = 923 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 86/218 (39%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHW-KEVHDEKIKAL 59 Y K +E+ ++ A + Q+ N ++ ++ K++ L Sbjct: 697 LYRKHAQEVMDRIRASQGIARSGLVLKLLTGLKQICNHPAHFLKQDDTALSGRSGKLELL 756 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ ++V + + L++ G + + +Q + +G Sbjct: 757 DELLDTITAEGGAVLVFTQYVAMAKLLERHLRERGIGAQLLHGGTPVPRREELVQRFQDG 816 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL + +V + WW+ +E R + G R+V V Sbjct: 817 EVPVFLLSLKAAGTGLNLTR-ADHVVHYDRWWNPA-----VEAQATDRAYRIGQTRSVQV 870 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + +IA+ TI++ + L +K + D +L + + + Sbjct: 871 HKMIAEGTIEDRIAALLESKKDLADAVLGSGEGALTEL 908 >gi|119512991|ref|ZP_01632051.1| SWI/SNF family helicase [Nodularia spumigena CCY9414] gi|119462365|gb|EAW43342.1| SWI/SNF family helicase [Nodularia spumigena CCY9414] Length = 1404 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 25/213 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 M Y +R+ L + EA ++ +K + + E+ K+ Sbjct: 1182 MAFYEALRRQAISKLTESDAEAGKKHLQVLAEIMKLRRACCNPSLVMPDT---ELPSSKL 1238 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 + ++ + N +V F L ++ Q + + + + Sbjct: 1239 QLFGEVLGELLENRHKALVFSQFVDHLHIIRDYLEQQGINYQYLDGSTPVAERKKRVDAF 1298 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G + + G GLNL + ++ WW+ +E R + G +R Sbjct: 1299 QAGTGDVFLISLKAGGTGLNLTA-ADYVIHTDPWWNPA-----VEDQASDRAHRIGQQRP 1352 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y L+A++TI++ ++ K + D LL Sbjct: 1353 VTIYRLVAKDTIEDKIVALHHHKRDLADTLLEG 1385 >gi|225166221|ref|ZP_03727929.1| Non-specific serine/threonine protein kinase [Opitutaceae bacterium TAV2] gi|224799535|gb|EEG18056.1| Non-specific serine/threonine protein kinase [Opitutaceae bacterium TAV2] Length = 552 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 75/216 (34%), Gaps = 27/216 (12%) Query: 2 KQY----HKFQRELY-CDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 + Y + +REL + G + A + ++ ++ Q+ + Sbjct: 326 RLYRDWQERSERELLDLETGGASESALRLATLTQLLRLRQICCDPRLVAPDSAA-PADSA 384 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPCTIQ 102 K++A ++ + + ++V F S + T + + Sbjct: 385 KLEAFRELLAEAIDDGHRLLVFSQFTSLLALLRAEFDEQQLPYCYLDGTMTPRQRQAEVD 444 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N IPL + G GLNL G + +V F WW+ E R + G Sbjct: 445 RFNTNDDIPLFLISLKAGGTGLNLT-GADTVVHFDPWWNPAA-----EAQATDRAHRIGQ 498 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V Y LI T++E VLQ K + + A Sbjct: 499 TRVVTSYKLICTGTVEEKVLQLQEQKRALLANVFEA 534 >gi|126173709|ref|YP_001049858.1| non-specific serine/threonine protein kinase [Shewanella baltica OS155] gi|125996914|gb|ABN60989.1| SNF2-related protein [Shewanella baltica OS155] Length = 1073 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +++L + + + + +K Q E+ K + K+ Sbjct: 851 LYESIRLVMEKKLRDLFATQGVGSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKSNAKL 910 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNE 106 L+ + + I++ F S L+ ++ I ++ E Sbjct: 911 DWLKQNLPEMVQEGRKILIFSQFTSMLSLIEAELVDLGLEYSKLTGQTRLRQAQIDKFQE 970 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ E+ R + G + VF Sbjct: 971 GDTPVFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----EKQATDRAHRIGQDKPVF 1024 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA+ T++E + + + K ++ D +L Sbjct: 1025 VYKLIAEGTVEEKIQEMQQHKQSLADSILEG 1055 >gi|209363583|ref|YP_002268001.1| phage helicase [Staphylococcus phage phi2958PVL] gi|208973084|dbj|BAG74400.1| phage helicase [Staphylococcus phage phi2958PVL] Length = 423 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAVY DE + + +HD+K+ LE Sbjct: 225 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDE-EDVRLIHDKKLDKLE 283 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 284 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 342 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 343 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 397 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 398 YKALQNKELTQEELMKAIKARI 419 >gi|291569923|dbj|BAI92195.1| SNF2 helicase homolog [Arthrospira platensis NIES-39] Length = 1068 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 73/221 (33%), Gaps = 30/221 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-------DEEKHWKEVHD 53 Y K E +++ VK Q+ N + E + Sbjct: 825 LYQKLVDESLSEIESSTGIQRRGMILGLLVKLKQVCNHPLLLGAKTKAKKEMPTLNSAYS 884 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCT 100 K++ L ++E+ + ++ F L R G + Sbjct: 885 GKLQRLNEMLEELISEGDRALIFTQFAEWGKLLKPYLEAKLNREVLFLYGGSRKLQREQM 944 Query: 101 IQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + P++ + G GLNL N + F WW+ +E R + Sbjct: 945 VDRFQQDPQGPPVMILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATDRVFR 998 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G R V V+ + T++E + + +K + + ++++ + Sbjct: 999 IGQTRNVQVHKFVCTGTLEEKIHDLIESKQALAEQVVSSGE 1039 >gi|296125777|ref|YP_003633029.1| SNF2-related protein [Brachyspira murdochii DSM 12563] gi|296017593|gb|ADG70830.1| SNF2-related protein [Brachyspira murdochii DSM 12563] Length = 1031 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 73/215 (33%), Gaps = 22/215 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ + +R+ + S + Q+ ++ + K Sbjct: 819 IEIFETVKRKGFAQ------SHIEIFSALTRLRQVCCHPRLMHDDLRGESHTSGKFNMFI 872 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGKIP 110 +I + + ++V F L ++ F + +N G+ P Sbjct: 873 EMIREAISGGHSVLVFSSFTRMLNLMRSAFKKLGIDYFYLDGATKDRMDLVHRFNAGEAP 932 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GL L + ++ + LWW+ +E R + G KR V Y L Sbjct: 933 VFLLSLKAAGTGLTLTQ-ADTVMHYDLWWNPA-----VEDQATDRAYRIGQKRVVTNYKL 986 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I + TI+E +L+ K + D ++ + + Sbjct: 987 ITRGTIEEKILELQNKKRVLIDTVVGDSMGDINKL 1021 >gi|160874619|ref|YP_001553935.1| non-specific serine/threonine protein kinase [Shewanella baltica OS195] gi|160860141|gb|ABX48675.1| Non-specific serine/threonine protein kinase [Shewanella baltica OS195] gi|315266860|gb|ADT93713.1| SNF2-related protein [Shewanella baltica OS678] Length = 1073 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +++L + + + + +K Q E+ K + K+ Sbjct: 851 LYESIRLVMEKKLRDLFATQGVGSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKSNAKL 910 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNE 106 L+ + + I++ F S L+ ++ I ++ E Sbjct: 911 DWLKQNLPEMVQEGRKILIFSQFTSMLSLIEAELVDLGLDYSKLTGQTRLRQAQIDKFQE 970 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ E+ R + G + VF Sbjct: 971 GDTPVFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----EKQATDRAHRIGQDKPVF 1024 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA+ T++E + + + K ++ D +L Sbjct: 1025 VYKLIAEGTVEEKIQEMQQHKQSLADSILEG 1055 >gi|21227581|ref|NP_633503.1| SWF/SNF family helicase [Methanosarcina mazei Go1] gi|20905965|gb|AAM31175.1| SWF/SNF family helicase [Methanosarcina mazei Go1] Length = 1089 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 73/212 (34%), Gaps = 24/212 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ ++G S + Q+ N + ++ K+ L Sbjct: 857 LYAAVLEDIREAIEGAEEGIQRKGIILSALSRLKQVCNHPAQFLKDNSTIPGRSGKLARL 916 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNE 106 +++ N +V F +++ G + ++ + E Sbjct: 917 TEMLDVVLENGEKALVFTQFAEMGKMVKEHLQASFGCEVLFLHGGVPRKQRDRMLERFQE 976 Query: 107 G--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G +P+ + G GLNL G N + F WW+ +E R + G K+ Sbjct: 977 GKEYLPIFVLSLKAGGTGLNLT-GANHVFHFDRWWNPA-----VENQATDRAFRIGQKKN 1030 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V+ I T++E + + + K + + ++ Sbjct: 1031 VEVHKFICAGTLEEKIDEIIERKVQVAENVVG 1062 >gi|261854732|ref|YP_003262015.1| SNF2-related protein [Halothiobacillus neapolitanus c2] gi|261835201|gb|ACX94968.1| SNF2-related protein [Halothiobacillus neapolitanus c2] Length = 1086 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 72/215 (33%), Gaps = 26/215 (12%) Query: 3 QYH----KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y ++ + + + +K Q+ K + Sbjct: 855 LYETVRSAMDEKVRQSIDSMGLARSHIVILDALLKLRQVCCDPRLLPSSKTGQSAKRPTQ 914 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQ 102 K+ L ++ + I+V F S LA + + ++ Sbjct: 915 SAKLDLLLTMLPELVDEGRRILVFSQFTSMLALISEALTKAKLAHSMLTGETRDRETVVR 974 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ G P+ + G GLNL + ++ + WW+ E R + G Sbjct: 975 QFQNGDTPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----EDQATDRAHRIGQT 1028 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R VFVY L+ + +I+E +L K+ + + +L+ Sbjct: 1029 RQVFVYKLVTEGSIEEKILALQDKKAKLAEGVLSG 1063 >gi|223986447|ref|ZP_03636451.1| hypothetical protein HOLDEFILI_03763 [Holdemania filiformis DSM 12042] gi|223961599|gb|EEF66107.1| hypothetical protein HOLDEFILI_03763 [Holdemania filiformis DSM 12042] Length = 471 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y E + +L + A N ++ ++ QL G + D+ ++V + K+ LE Sbjct: 261 MKLYKNLVDESFAELSDGEVTATNVLTRLLRLNQLTGGFICSDDSSKAEQVSNAKMSVLE 320 Query: 61 VIIEK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTIQEWNEGKI 109 I++ +++ F +L ++ + G ++D Q N+ ++ Sbjct: 321 DIVDASLQEGKKLVIIARFIPELHAICKMLGKKGIRHSLIMGGVNNRDEQVAQFQNDPEV 380 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G+ L + +VF+SL + + +Q RI +AG K Y Sbjct: 381 SVFVGQIATAGMGITLTA-ASTMVFYSLDYSMSNFEQTKARI-----HRAGQKFPCTYLY 434 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 L A+ TID VL+ L++K+++ L++ + Sbjct: 435 LTAEGTIDTKVLKALKSKASLAKTLVDDYR 464 >gi|257432448|ref|ZP_05608811.1| SNF2 family protein [Staphylococcus aureus subsp. aureus E1410] gi|257283327|gb|EEV13459.1| SNF2 family protein [Staphylococcus aureus subsp. aureus E1410] Length = 455 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y +++ + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDDEDVRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARI 451 >gi|317131242|ref|YP_004090556.1| SNF2-related protein [Ethanoligenens harbinense YUAN-3] gi|315469221|gb|ADU25825.1| SNF2-related protein [Ethanoligenens harbinense YUAN-3] Length = 1081 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 77/210 (36%), Gaps = 23/210 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + +L G + + + QL Y E+ K++ Sbjct: 855 KLYMANLASIRQELTGSLQNSNKLIVLAMLTRLRQLCCDPSLYYEDYT---GGSAKLELC 911 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEG 107 ++ + +++ F S L+ + + ++ +N Sbjct: 912 MELLRSVTESGHKVLLFSQFTSMLSIIADRLTGDGIGYYVLKGSTSKEERARLTTRFNND 971 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL +I++ + WW++ R + G K +V V Sbjct: 972 DTPVFLISLKAGGTGLNLTA-ADIVIHYDPWWNVSAQ-----NQATDRAHRIGQKSSVQV 1025 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LIA++TI+E +L+ + K + D +++ Sbjct: 1026 YKLIAKDTIEEKILKLQQDKLKLADSVISE 1055 >gi|288553478|ref|YP_003425413.1| SNF2 helicase [Bacillus pseudofirmus OF4] gi|288544638|gb|ADC48521.1| SNF2 helicase [Bacillus pseudofirmus OF4] Length = 998 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 73/219 (33%), Gaps = 22/219 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ L + + K Q+ N + + K L Sbjct: 767 LYQAVVDDILSRLNQVSQLERRALILKSLTKLKQICNHPAQFLKTDEVSRHDSRKWDELF 826 Query: 61 VIIEKANAA--PIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 +IE + +++ + + T K I+ + + Sbjct: 827 ALIEDIHNRNEKVLIFSQYKEMGRLIAEELERRYQKDVPFLHGSLTRPKRQEAIERFQED 886 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ + G GLNL N ++ + WW+ +E R + G + V Sbjct: 887 PEVTAFVLSLKAGGVGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAFRIGQTKDVT 940 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ L+ T++E + + L K ++ D +L A +++ + Sbjct: 941 VHKLMTSGTLEERIDKMLTQKQSLADQVLQAGEQQVTEL 979 >gi|304311942|ref|YP_003811540.1| Predicted helicase [gamma proteobacterium HdN1] gi|301797675|emb|CBL45896.1| Predicted helicase [gamma proteobacterium HdN1] Length = 883 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 69/211 (32%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + EL L+ + ++ Q+ N + + WK K L Sbjct: 652 LYQRTVEELASALEKSDGVERKGLVLAFLMRFKQICNHPSQWLGDGTWKPADSGKFARLA 711 Query: 61 VIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 I E ++V F R G + K ++ + + Sbjct: 712 EITETIAAKQEKVLVFTQFRETTAPLAAFLGNVFGREGLVLHGGTAVGKRRELVKRFQED 771 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 IP + G GLNL + ++ F WW+ +E R + G R V Sbjct: 772 EAIPFFVLSLKAGGTGLNLTA-ASHVIHFDRWWNPA-----VENQATDRAWRIGQHRNVL 825 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + TI+E + +R+K + +L Sbjct: 826 AHKFVCRGTIEERIDALIRSKQQLVQDVLEG 856 >gi|288962950|ref|YP_003453244.1| SNF2 family DNA/RNA helicase [Azospirillum sp. B510] gi|288915216|dbj|BAI76700.1| SNF2 family DNA/RNA helicase [Azospirillum sp. B510] Length = 1172 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 21/209 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALE 60 + RE +G +K Q+ E K V K+ L Sbjct: 951 DQRVREEVAR-KGLARSHITILDALLKLRQVCCDPRLVKLESARKRVAKGAASAKLDRLL 1009 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIP 110 ++ + A+ I++ F S ++ + + G++P Sbjct: 1010 EMLPELLADGRRILLFSQFTSMFDLMRPELERLAIPFVELTGDTRDRETPVNRFQAGEVP 1069 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL + ++ + WW+ +E R + G + VFVY L Sbjct: 1070 LFLISLKAGGTGLNLTA-ADTVIHYDPWWNPA-----VEDQATDRAHRIGQDKPVFVYKL 1123 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + T++E ++Q K + + + + + Sbjct: 1124 VTTGTVEERMVQLQERKRRLGEAVYDQDR 1152 >gi|114048179|ref|YP_738729.1| SNF2-like protein [Shewanella sp. MR-7] gi|113889621|gb|ABI43672.1| SNF2-related protein [Shewanella sp. MR-7] Length = 1082 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++++ + + + +K Q E+ K ++ K+ Sbjct: 860 LYESIRLSMEKKIRELFASQGVAGSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAKL 919 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNE 106 L + + I++ F S L +++ I ++ E Sbjct: 920 NWLSQNLPEMVQEGRKILIFSQFTSMLILIEELLQSLDIDYSKLTGQTRLRQGQIDKFQE 979 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ E+ R + G + VF Sbjct: 980 GDTPVFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----EKQATDRAHRIGQENPVF 1033 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA+ T++E + + + K + D +L Sbjct: 1034 VYKLIAEGTVEEKIQEMQQHKQGLADSILEG 1064 >gi|66395458|ref|YP_239852.1| ORF008 [Staphylococcus phage 2638A] gi|62635885|gb|AAX90996.1| ORF008 [Staphylococcus phage 2638A] Length = 452 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 108/202 (53%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + I A + AS + K LQL+NGAV Y +++ + +HD K+ LE Sbjct: 254 KLYDELEKHYILESEEDGTIVAQSGASLSQKLLQLSNGAV-YTDDESVRHLHDRKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ P++V Y+F D R+ D W +GK+ +L AHPAS G Sbjct: 313 EIIEESQGQPLLVFYNFKHDKERI-MERFDEVVTLGDESYKDRWIKGKVKILLAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 372 HGLNLQKGGHIIVWFGLTWSLELYQ-----QANARLYRQGQTHTTIIHHIMTDNTIDQKV 426 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 Q L+ K Q+ L+ A+K Sbjct: 427 YQALQNKELTQEDLMQAIKARI 448 >gi|113970955|ref|YP_734748.1| SNF2-like protein [Shewanella sp. MR-4] gi|113885639|gb|ABI39691.1| SNF2-related protein [Shewanella sp. MR-4] Length = 1082 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++++ + + + +K Q E+ K ++ K+ Sbjct: 860 LYESIRLSMEKKIRELFASQGVAGSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAKL 919 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNE 106 L + + I++ F S L +++ I ++ E Sbjct: 920 NWLSQNLPEMVQEGRKILIFSQFTSMLILIEELLQSLDIDYSKLTGQTRLRQGQIDKFQE 979 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ E+ R + G + VF Sbjct: 980 GDTPVFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----EKQATDRAHRIGQENPVF 1033 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA+ T++E + + + K + D +L Sbjct: 1034 VYKLIAEGTVEEKIQEMQQHKQGLADSILEG 1064 >gi|66395597|ref|YP_239997.1| ORF009 [Staphylococcus phage 3A] gi|62635943|gb|AAX91054.1| ORF009 [Staphylococcus phage 3A] Length = 455 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y +++ + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDDEDVRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARI 451 >gi|304409583|ref|ZP_07391203.1| SNF2-related protein [Shewanella baltica OS183] gi|307303941|ref|ZP_07583694.1| SNF2-related protein [Shewanella baltica BA175] gi|304352101|gb|EFM16499.1| SNF2-related protein [Shewanella baltica OS183] gi|306912839|gb|EFN43262.1| SNF2-related protein [Shewanella baltica BA175] Length = 1073 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +++L + + + + +K Q E+ K + K+ Sbjct: 851 LYESIRLVMEKKLRDLFATQGVGSSHIEFLDALLKLRQACCDPRLVKLEQAQKVKSNAKL 910 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNE 106 L+ + + I++ F S L+ ++ I ++ E Sbjct: 911 DWLKQNLPEMVQEGRKILIFSQFTSMLSLIEAELVDLGLDYSKLTGQTRLRQAQIDKFQE 970 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ E+ R + G + VF Sbjct: 971 GDTPVFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----EKQATDRAHRIGQDKPVF 1024 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA+ T++E + + + K ++ D +L Sbjct: 1025 VYKLIAEGTVEEKIQEMQQHKQSLADSILEG 1055 >gi|237749385|ref|ZP_04579865.1| helicase [Oxalobacter formigenes OXCC13] gi|229380747|gb|EEO30838.1| helicase [Oxalobacter formigenes OXCC13] Length = 1125 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 80/221 (36%), Gaps = 24/221 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 + Y REL E I +K Q+ Sbjct: 892 QTYES-VRELMDKKVQEEIAKLGIAHCQIIILEALLKLRQVCCDPRLLRGSAKKANTSSA 950 Query: 55 KIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEW 104 K+ L ++++ +V F S L+ ++ + I+ + Sbjct: 951 KLNELMEMLDELLLEKRHILVFSQFTSMLSLIETELKNRSIPYEILTGDTTDRASAIRNF 1010 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +GK+ + + G GLNL + ++ + WW+ +E R + G + Sbjct: 1011 QDGKVSVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQATDRAWRIGQDKP 1064 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VFVY LIA+ T++E + + + K+ + +L++ + + + + Sbjct: 1065 VFVYKLIAKGTLEEKIQELQQRKADLATAMLSSGQAQHVQI 1105 >gi|21283134|ref|NP_646222.1| hypothetical protein MW1405 [Staphylococcus aureus subsp. aureus MW2] gi|49483700|ref|YP_040924.1| hypothetical protein SAR1523 [Staphylococcus aureus subsp. aureus MRSA252] gi|148267489|ref|YP_001246432.1| SNF2-related protein [Staphylococcus aureus subsp. aureus JH9] gi|150393543|ref|YP_001316218.1| SNF2-related protein [Staphylococcus aureus subsp. aureus JH1] gi|282905864|ref|ZP_06313719.1| hypothetical protein SDAG_01488 [Staphylococcus aureus subsp. aureus Btn1260] gi|282919229|ref|ZP_06326964.1| hypothetical protein SASG_00535 [Staphylococcus aureus subsp. aureus C427] gi|282921765|ref|ZP_06329482.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|282927343|ref|ZP_06334961.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|21204574|dbj|BAB95270.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49241829|emb|CAG40521.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus MRSA252] gi|147740558|gb|ABQ48856.1| SNF2-related protein [Staphylococcus aureus subsp. aureus JH9] gi|149945995|gb|ABR51931.1| SNF2-related protein [Staphylococcus aureus subsp. aureus JH1] gi|282317039|gb|EFB47413.1| hypothetical protein SASG_00535 [Staphylococcus aureus subsp. aureus C427] gi|282331156|gb|EFB60670.1| hypothetical protein SDAG_01488 [Staphylococcus aureus subsp. aureus Btn1260] gi|282590667|gb|EFB95743.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|282594027|gb|EFB99016.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|283470735|emb|CAQ49946.1| SNF2 family N-domain protein [Staphylococcus aureus subsp. aureus ST398] Length = 452 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAVY DE + + +HD+K+ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDE-EDVRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARI 448 >gi|302333125|gb|ADL23318.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 452 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAVY DE + + +HD+K+ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDE-EDVRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARI 448 >gi|223936025|ref|ZP_03627939.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] gi|223895247|gb|EEF61694.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] Length = 1046 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 78/216 (36%), Gaps = 24/216 (11%) Query: 3 QYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-VHDEK 55 Y + ++ G N + ++ Q+ + + K K Sbjct: 821 LYQQVLEASRKEIVNAVDANGLNKSRMVVLTALLRLRQICCDLRLLESKLEAKPSEPSGK 880 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEW 104 ++ ++E+ ++V F + L L+ + G T D+ + Sbjct: 881 VELFGELLEEVVDGGHRVLVFSQFTTMLGLLRERLAAENIEFCYLDGATKDRAQVVERFQ 940 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +IP+ + G GLNL G + ++ F WW+ +E R + G KR Sbjct: 941 RDSRIPVFLISLKAGGTGLNLT-GADTVIHFDPWWNPA-----VEAQATDRAHRIGQKRV 994 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V Y LI + T++E +L K + +L ++ Sbjct: 995 VTSYKLITRGTVEEKILNLQTRKRALFQGMLGGEEQ 1030 >gi|326445095|ref|ZP_08219829.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 932 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 69/212 (32%), Gaps = 22/212 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y RE +Q A Q+ N Y +E + K+ Sbjct: 705 LYETVVRETMVQIQAAEGIARRGLVLKLLTSLRQICNHPAQYLKETASPRLAGRSGKLDL 764 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNE 106 + ++ A ++V + + Q + P + + Sbjct: 765 FDDLLGVMLAEQQSVLVFTQYVEMAHLVSARLEQQNVNHRLLHGGTPVAARPALVDAFQR 824 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GL L ++F WW+ + R + G + V Sbjct: 825 GDFPVFLLSLRAAGTGLTLTR-AQHVIFLDQWWNPA-----VMDQAADRAYRIGTRHPVQ 878 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V+ LI++ T++E + + L K + D +L+ + Sbjct: 879 VHTLISEGTVEERIAELLAAKKDLADTVLSDV 910 >gi|254393510|ref|ZP_05008646.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|197707133|gb|EDY52945.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 480 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 69/212 (32%), Gaps = 22/212 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y RE +Q A Q+ N Y +E + K+ Sbjct: 253 LYETVVRETMVQIQAAEGIARRGLVLKLLTSLRQICNHPAQYLKETASPRLAGRSGKLDL 312 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNE 106 + ++ A ++V + + Q + P + + Sbjct: 313 FDDLLGVMLAEQQSVLVFTQYVEMAHLVSARLEQQNVNHRLLHGGTPVAARPALVDAFQR 372 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GL L ++F WW+ + R + G + V Sbjct: 373 GDFPVFLLSLRAAGTGLTLTR-AQHVIFLDQWWNPA-----VMDQAADRAYRIGTRHPVQ 426 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V+ LI++ T++E + + L K + D +L+ + Sbjct: 427 VHTLISEGTVEERIAELLAAKKDLADTVLSDV 458 >gi|160942559|ref|ZP_02089806.1| hypothetical protein FAEPRAM212_00034 [Faecalibacterium prausnitzii M21/2] gi|158446143|gb|EDP23146.1| hypothetical protein FAEPRAM212_00034 [Faecalibacterium prausnitzii M21/2] Length = 1098 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 22/206 (10%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + ++ ++ + K+ A Sbjct: 878 KLYLAAVVDAREKLRAAKPEDKMTVFAVLMRLREICCDPRLVADN---WTGSSAKLDACL 934 Query: 61 VIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ +A I++ F S L ++ +N+G+ Sbjct: 935 ELVTEAVAGGHRILLFSQFTSMLELLAKRLDEAGVSHFTLQGSTPKPVRAEQVRRFNQGE 994 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL +I++ + WW+L R + G + V VY Sbjct: 995 ADVFLISLRAGGTGLNLTA-ADIVIHYDPWWNLAAQ-----NQATDRAYRIGQRNPVQVY 1048 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLL 194 LIAQ+TI+E +++ + K ++ D + Sbjct: 1049 RLIAQDTIEEKIVELQQAKQSLADTV 1074 >gi|295103966|emb|CBL01510.1| Superfamily II DNA/RNA helicases, SNF2 family [Faecalibacterium prausnitzii SL3/3] Length = 1098 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 74/206 (35%), Gaps = 22/206 (10%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + ++ ++ + K++A Sbjct: 878 KLYLAAVVDAREKLRAAKPEDKMTVFAVLMRLREICCDPRLVADN---WTGSSAKLEACL 934 Query: 61 VIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ +A I++ F S L ++ +N+G+ Sbjct: 935 ELVTEAVAGGHRILLFSQFTSMLELLAKRLDEAGVSHFTLQGSTPKPVRAEQVRRFNQGE 994 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL +I++ + WW+L R + G + V VY Sbjct: 995 ADVFLISLRAGGTGLNLTA-ADIVIHYDPWWNLAAQ-----NQATDRAYRIGQRNPVQVY 1048 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLL 194 LIAQ+TI+E +++ + K ++ D + Sbjct: 1049 RLIAQDTIEEKIVELQQAKQSLADTV 1074 >gi|326203945|ref|ZP_08193807.1| SNF2 helicase associated domain protein [Clostridium papyrosolvens DSM 2782] gi|325986043|gb|EGD46877.1| SNF2 helicase associated domain protein [Clostridium papyrosolvens DSM 2782] Length = 1077 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 81/216 (37%), Gaps = 27/216 (12%) Query: 2 KQY----HKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + +++ ++ S + QL + + E K Sbjct: 854 KLYIAYLEQAKGDIFKEINQNGYERSQIKILSVLTRLRQLCCHPALFVDNY---EGDSGK 910 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + L+ I+ + I++ F S LA +++ + ++ ++ Sbjct: 911 LLLLKEIVVDSLTSGHRILLFSQFTSMLAIIRQWLQEDGVDYLYLDGSTPAEERMKMVKN 970 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + S G GLNL G + ++ + WW+ +E R + G + Sbjct: 971 FNNGQGQIFLLSLKSGGTGLNLT-GADTVIHYDPWWNPA-----VEDQATDRAYRIGQLK 1024 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V L+ TI+E +L+ K + D ++ + + Sbjct: 1025 TVHVMKLVTHGTIEEKILRLKDRKKQLVDAVIQSGE 1060 >gi|307822478|ref|ZP_07652709.1| SNF2-related protein [Methylobacter tundripaludum SV96] gi|307736082|gb|EFO06928.1| SNF2-related protein [Methylobacter tundripaludum SV96] Length = 1083 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 72/216 (33%), Gaps = 24/216 (11%) Query: 3 QYHKFQ-------RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 Y + R+ +G + +K Q ++ K K Sbjct: 858 LYESIRLTMEKKVRDAIAQ-KGLSRSHITILDALLKLRQTCCDPRTLSLKEAQKVQESAK 916 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWN 105 + L ++ + I+V F + ++ + I+ + Sbjct: 917 LDLLMELLPEQLEEGRRILVFSQFTRMIGLIENELNDMKIGYAKLTGQTRNRDEAIERFK 976 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G++ + + G GLNL + ++ + WW+ E R + G + V Sbjct: 977 SGEVNVFLISLKAGGVGLNLTE-ADTVIIYDPWWNPAA-----ESQAADRAHRIGQDKPV 1030 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 FVY LI +NT++E ++ K + + + KE Sbjct: 1031 FVYKLITENTVEEKIIAMQDKKRALAEGIYKGGAKE 1066 >gi|257428238|ref|ZP_05604636.1| SNF2 family protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257275079|gb|EEV06566.1| SNF2 family protein [Staphylococcus aureus subsp. aureus 65-1322] Length = 455 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y +++ + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDDEDVRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARI 451 >gi|186474348|ref|YP_001863319.1| non-specific serine/threonine protein kinase [Burkholderia phymatum STM815] gi|184198307|gb|ACC76269.1| Non-specific serine/threonine protein kinase [Burkholderia phymatum STM815] Length = 892 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + ++L L+G + S ++ Q+ N + + W K L Sbjct: 660 LYERAVKDLAAALEGADGIERKGIVLSYLMRFKQICNHPSQWLGDAAWSPEASGKFGRLR 719 Query: 61 VII--EKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 ++ A ++V F R G + K ++++ + Sbjct: 720 ELVDVMAAKQEKVLVFTQFRETTEPLAAFLGSLFGREGLILHGGTAVGKRRELVRQFQED 779 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + G GLNL + ++ F WW+ +E R + G ++ V Sbjct: 780 ESTPFFVLSLKAGGSGLNLTA-ASHVIHFDRWWNPA-----VENQATDRAFRIGQRKNVL 833 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ + Q T+++ + Q + +K + + +L Sbjct: 834 VHKFVCQGTVEDRIDQLIESKQQLVNDMLEG 864 >gi|326444829|ref|ZP_08219563.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 980 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 74/218 (33%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE + Q+ N Y EE+ K++ L Sbjct: 751 LYEAVVRETLDAVAAAQGMERRGLVVRLLTSLKQICNHPAQYLKEEEPVLGGRSGKLELL 810 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ A ++V + L+ G + + + G Sbjct: 811 DELLDTIVAEGAGVLVFTQYVRMARLLESHLAARGIAAQLLHGGTPVPVRDEMVTRFQNG 870 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V WW+ +E R + G R V V Sbjct: 871 EVPVFLLSLKAAGTGLNLTR-AEHVVHLDRWWNPA-----VEAQATDRAYRIGQTRPVQV 924 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ T+++ + + L K + D +L + + + Sbjct: 925 HRLIAEGTVEDRIAELLARKRELADAVLGSGEGALTEL 962 >gi|294816509|ref|ZP_06775152.1| Putative SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|294329108|gb|EFG10751.1| Putative SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 1040 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 74/218 (33%), Gaps = 21/218 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y RE + Q+ N Y EE+ K++ L Sbjct: 811 LYEAVVRETLDAVAAAQGMERRGLVVRLLTSLKQICNHPAQYLKEEEPVLGGRSGKLELL 870 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEG 107 + +++ A ++V + L+ G + + + G Sbjct: 871 DELLDTIVAEGAGVLVFTQYVRMARLLESHLAARGIAAQLLHGGTPVPVRDEMVTRFQNG 930 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P+ + G GLNL +V WW+ +E R + G R V V Sbjct: 931 EVPVFLLSLKAAGTGLNLTR-AEHVVHLDRWWNPA-----VEAQATDRAYRIGQTRPVQV 984 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + LIA+ T+++ + + L K + D +L + + + Sbjct: 985 HRLIAEGTVEDRIAELLARKRELADAVLGSGEGALTEL 1022 >gi|258420304|ref|ZP_05683251.1| helicase [Staphylococcus aureus A9719] gi|258448843|ref|ZP_05696953.1| phage helicase [Staphylococcus aureus A6224] gi|257843729|gb|EEV68131.1| helicase [Staphylococcus aureus A9719] gi|257857880|gb|EEV80771.1| phage helicase [Staphylococcus aureus A6224] gi|329730625|gb|EGG67010.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 452 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAVY DE + + +HD+K+ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDE-EDVRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARI 448 >gi|295835764|ref|ZP_06822697.1| SNF2/helicase domain-containing protein [Streptomyces sp. SPB74] gi|295825680|gb|EFG64393.1| SNF2/helicase domain-containing protein [Streptomyces sp. SPB74] Length = 788 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 23/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYY---DEEKHWKEVHDEKIK 57 Y RE + + Q+ N Y + K+ Sbjct: 559 LYEAVVRESLAAIGSAEGMSRRGLVLRLITSLKQICNHPAQYLKEHPDTARLPGRSGKLD 618 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN 105 AL+ ++ ++V + L G ++ + + Sbjct: 619 ALDELLGTILAEDGSVLVFTQYVRMARLLTAHLAAQAVPAGLLHGGTPVEARDALVDRFQ 678 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G +P+L + G GLNL G+ +V + WW+ +E R + G R V Sbjct: 679 SGALPVLVLSLKAAGTGLNLTRAGH-VVHYDRWWNPA-----VEDQATDRAHRIGQTRHV 732 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ L+A+ T+++ + + K + D +L Sbjct: 733 QVHRLLAEGTVEDRIADLVAGKQALADAVLG 763 >gi|301056711|ref|YP_003794922.1| SNF2 family helicase [Bacillus anthracis CI] gi|300378880|gb|ADK07784.1| SNF2 family helicase [Bacillus cereus biovar anthracis str. CI] Length = 918 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|292492078|ref|YP_003527517.1| SNF2-related protein [Nitrosococcus halophilus Nc4] gi|291580673|gb|ADE15130.1| SNF2-related protein [Nitrosococcus halophilus Nc4] Length = 1042 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 71/213 (33%), Gaps = 26/213 (12%) Query: 3 QYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-HWKEVHDEKI-- 56 Y ++ + +G + S ++ Q+ N + ++ + E K+ Sbjct: 810 LYEAVIQKVKDSLAETEGIQRKGL-ILSTLMRLKQICNHPAQFLQDGSEFSEGRSHKLER 868 Query: 57 --KALEVIIEKANAAPIIVAY---------HFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + +E ++ + + + F G + I E+ Sbjct: 869 VAQMVEEVMAEGEGLLLFTQFTEIGQALEKRFQHHYHYPTYYLHGGTARRRRERMIAEFQ 928 Query: 106 EGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G G+NL N + F WW+ +E R + G + Sbjct: 929 DPDTGPAVFILSLKAGGVGINLTR-ANHVFHFDRWWNPA-----VENQATDRAYRIGQTK 982 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFV+ ++ T++E + Q L K + ++ Sbjct: 983 QVFVHKMVTLGTLEERIDQMLEEKQRLAGSIVG 1015 >gi|145298464|ref|YP_001141305.1| SWI/SNF family helicase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851236|gb|ABO89557.1| SWI/SNF family helicase [Aeromonas salmonicida subsp. salmonicida A449] Length = 1280 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 73/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +RE+ +Q + A + S + +L E K+ Sbjct: 1063 QLYEATRREVVQQVQSADGRALMHVLSGLTRLRRLCCSPELVMPEWSQT---SSKLDEAM 1119 Query: 61 VIIEKA--NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++++A N ++V F L G + +I + Sbjct: 1120 ALLDEAIGNGHRVLVFSQFVDLLSLLRARIEQKKWDYCYLDGGCSAKSRQDSILRFRHEP 1179 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +PL + G GLNL + ++ WW+ +E R + G + V VY Sbjct: 1180 VPLFLISLKAGGTGLNLTQ-ADTVLHLDPWWNPA-----VEDQASDRAHRMGQTQPVTVY 1233 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + T++E ++ K + D LL+ Sbjct: 1234 RLVCEQTVEEKIVALHDEKRALADGLLSG 1262 >gi|148658072|ref|YP_001278277.1| non-specific serine/threonine protein kinase [Roseiflexus sp. RS-1] gi|148570182|gb|ABQ92327.1| Non-specific serine/threonine protein kinase [Roseiflexus sp. RS-1] Length = 1068 Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 72/211 (34%), Gaps = 22/211 (10%) Query: 2 KQYHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y K + L G A ++ Q+ N + + E Sbjct: 847 RLYIKQRDYYRALLLGLIDNAGIDNARMQVLEGLLRLRQICNHPRLIEPDFRGSSGKFEL 906 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 + + A +V F L R+ A+ G+T + + ++ Sbjct: 907 LIETLETL-AAEGRKALVFSQFVQMLTLIREALDARRIPYAYLDGQTRQRQQEVDRFQSD 965 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +P + G GLNL + ++ WW+ R + G ++ VF Sbjct: 966 ETLPFFLISLKAGGVGLNLTA-ADYVIHVDPWWNPAVEM-----QATDRTHRIGQEKPVF 1019 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY L+ +++++E +L K + + L+ A Sbjct: 1020 VYKLVTRDSVEEKILHLQNRKRELVEQLITA 1050 >gi|88857230|ref|ZP_01131873.1| putative DNA helicase with SNF2 domain [Pseudoalteromonas tunicata D2] gi|88820427|gb|EAR30239.1| putative DNA helicase with SNF2 domain [Pseudoalteromonas tunicata D2] Length = 1060 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 79/217 (36%), Gaps = 23/217 (10%) Query: 2 KQYHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEEK-HWKEVHDE 54 K Y + ++++ L+ G + +K Q+ +E + Sbjct: 836 KCYGEIRQKMEFKLKDLFAEIGIDKSRLAFLEALLKLRQICCSPQLLSDEGLQFSFADST 895 Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEW 104 K+ L + +I+ F S L+ +++ + + Sbjct: 896 KLDWLAKHLPAMLQQGRKVIIFSQFTSMLSLIEQQLQALNLGYAILTGQTRDRQSAVDSF 955 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +G + + G GLNL + ++ F WW+ Q R + G K+ Sbjct: 956 QQGDKSIFLISLKAGGTGLNLTA-ADTVIHFDPWWNPAVEQ-----QATDRAYRIGQKKP 1009 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VFVY LI Q+TI+E V + + K+ + + +A K+ Sbjct: 1010 VFVYKLICQDTIEERVYEMQQNKAALAESFFDAASKQ 1046 >gi|254497098|ref|ZP_05109919.1| DNA helicase [Legionella drancourtii LLAP12] gi|254353678|gb|EET12392.1| DNA helicase [Legionella drancourtii LLAP12] Length = 1091 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 75/220 (34%), Gaps = 23/220 (10%) Query: 3 QYHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYD-EEKHWKEVHDEK 55 Y + + ++ + +K Q+ E K Sbjct: 865 LYEAIRMSMEKKVRDAIVRQGLGKSHIIILDALLKLRQICCDPRLLSLPEATMAHGTSGK 924 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLA--------RLQKAFPQGRTLDKDPCTIQEWN 105 ++ L +++ ++V F S L R ++++ Sbjct: 925 LETLMELLDNLVGEGRRVLVFSQFTSMLQLIENELQARHYDYLKLTGQTQNRQAMVEKFQ 984 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EGK P+ + G GLNL + ++ + WW+ +E R + G + V Sbjct: 985 EGKTPVFLISLKAGGTGLNLTR-ADTVIHYDPWWNPA-----VEDQATDRTHRIGQENPV 1038 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 FVY LI T++E +L K + D +L+A + I + Sbjct: 1039 FVYKLITAGTVEEAILGMQERKRQLVDGILSADPAKAITL 1078 >gi|295428024|ref|ZP_06820656.1| helicase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591005|ref|ZP_06949643.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus MN8] gi|300911909|ref|ZP_07129352.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus TCH70] gi|295128382|gb|EFG58016.1| helicase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575891|gb|EFH94607.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus MN8] gi|300886155|gb|EFK81357.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus TCH70] Length = 455 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAVY DE + + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDE-EDVRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARI 451 >gi|117619195|ref|YP_857375.1| SNF2 family helicase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560602|gb|ABK37550.1| SNF2 family helicase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 1280 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 73/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +RE+ +Q + A + S + +L E K+ Sbjct: 1063 QLYEATRREVVQQVQSADGRALMHVLSGLTRLRRLCCSPQLVMPEWSQA---SSKLDEAM 1119 Query: 61 VIIEKA--NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++E+A N ++V F L G + +I + Sbjct: 1120 ALLEEAIGNGHRVLVFSQFVDLLSLLRARIEQQQWDYCYLDGGCSAKSRQESILRFRHEA 1179 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +PL + G GLNL + ++ WW+ +E R + G + V VY Sbjct: 1180 VPLFLISLKAGGTGLNLTQ-ADTVLHLDPWWNPA-----VEDQASDRAHRMGQTQPVTVY 1233 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + T++E ++ K + D LL+ Sbjct: 1234 RLVCEQTVEEKIVALHDEKRALADGLLSG 1262 >gi|317126523|ref|YP_004100635.1| SNF2-related protein [Intrasporangium calvum DSM 43043] gi|315590611|gb|ADU49908.1| SNF2-related protein [Intrasporangium calvum DSM 43043] Length = 1043 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++G N + K Q+ N ++ K+ LE Sbjct: 813 LYQTIVDDMMARIEGSEGIERRGNVLAAMAKLKQVCNHPAQVLHDRSAIGSRSGKVIRLE 872 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWN-E 106 ++E+ ++ + L G + + ++ + Sbjct: 873 ELLEEILAEGDRVLCFTQYTEFAEMLVPHLSARFDTDVAYLHGGTPKKRRDELVTQFQGD 932 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL N ++ WW+ +E R + G +R V Sbjct: 933 GGAPIFLLSLKAGGTGLNLTA-ANHVIHLDRWWNPA-----VENQATDRAYRIGQQRRVQ 986 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V + T++E + Q + K + +L++ ++ Sbjct: 987 VRKFVCTGTLEEKIDQMIEEKLALANLVVGDGER 1020 >gi|42784409|ref|NP_981656.1| helicase, putative [Bacillus cereus ATCC 10987] gi|42740341|gb|AAS44264.1| helicase, putative [Bacillus cereus ATCC 10987] Length = 918 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|47569742|ref|ZP_00240415.1| helicase, SNF2/RAD54 family [Bacillus cereus G9241] gi|47553593|gb|EAL11971.1| helicase, SNF2/RAD54 family [Bacillus cereus G9241] Length = 918 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|284024515|ref|ZP_06378913.1| SNF2-related protein [Staphylococcus aureus subsp. aureus 132] Length = 452 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAVY DE + + +HD+K+ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDE-EDVRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARI 448 >gi|251773065|gb|EES53621.1| DNA/RNA helicase, SNF2 family [Leptospirillum ferrodiazotrophum] Length = 1381 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 73/213 (34%), Gaps = 26/213 (12%) Query: 4 YHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y +R+ L+ + + ++ K + + + K+ A Sbjct: 1162 YEALRRKALETLEKLSGREKGSSRIHILAEITKLRRALCHPALVEPLT---LLPGAKLDA 1218 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNE 106 +++ + +N +V F L R + + + + Sbjct: 1219 FHLLVNELLSNRHKALVFSQFTGFLDRVAKSLDAKKIPYQYLDGSTPPKEREKRVAAFQA 1278 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ L + G GLNL + ++ WW+ +E R + G +R V Sbjct: 1279 GQGDLFLISLRAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQASDRAHRIGQQRPVT 1332 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +Y LI + +++E +L+ + K + LL + Sbjct: 1333 IYRLIVRESLEEKILELHKKKRDLATDLLEGGE 1365 >gi|87160506|ref|YP_494105.1| phage helicase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87126480|gb|ABD20994.1| phage helicase [Staphylococcus aureus subsp. aureus USA300_FPR3757] Length = 423 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAVY DE + + +HD+K+ LE Sbjct: 225 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDE-EDVRLIHDKKLDKLE 283 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T D + WN G I LL AHPAS G Sbjct: 284 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LDDSNYKERWNSGDIKLLIAHPASAG 342 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 343 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 397 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 398 YKALQNKELTQEELMKAIKARI 419 >gi|52140319|ref|YP_086511.1| SNF2 family helicase [Bacillus cereus E33L] gi|51973788|gb|AAU15338.1| SNF2 family helicase [Bacillus cereus E33L] Length = 918 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|295407565|ref|ZP_06817358.1| helicase [Staphylococcus aureus A8819] gi|297246595|ref|ZP_06930428.1| helicase [Staphylococcus aureus A8796] gi|294967584|gb|EFG43620.1| helicase [Staphylococcus aureus A8819] gi|297176553|gb|EFH35818.1| helicase [Staphylococcus aureus A8796] Length = 455 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAVY DE + + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDE-EDVRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARI 451 >gi|330819988|ref|YP_004348850.1| SNF2-related protein [Burkholderia gladioli BSR3] gi|327371983|gb|AEA63338.1| SNF2-related protein [Burkholderia gladioli BSR3] Length = 1119 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 18/206 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K ++ + +G +K Q+ E+ + K+ L ++ Sbjct: 885 EKMRK-AVAE-KGLARSHIVVLEALLKLRQVCCDPRLVKLERAARVEESAKLALLMEMLP 942 Query: 65 K--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 + +++ F L + + +Q + +G++PL Sbjct: 943 ELIEEGRRVLLFSQFTGMLELIAEALDAAGIAHVMLTGDTTDRVTPVQRFQQGEVPLFLI 1002 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + ++ + WW+ +E R + G + VFVY LI Sbjct: 1003 SLKAGGVGLNLTA-ADTVIHYDPWWNPS-----VENQATDRAHRLGQDKPVFVYKLIVAG 1056 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKK 200 +++E +L K+ + +L+ Sbjct: 1057 SVEEKILVLQEQKAALASAILSEDAA 1082 >gi|261404584|ref|YP_003240825.1| SNF2-like protein [Paenibacillus sp. Y412MC10] gi|261281047|gb|ACX63018.1| SNF2-related protein [Paenibacillus sp. Y412MC10] Length = 1033 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 73/215 (33%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYD--EEKHWKEVHDEKIKA 58 Y E+ ++ A K Q+ + + + + K++ Sbjct: 802 MYQAVVDEMMGQIESRTGMARKGLVLSSLTKLKQICDHPQLLRRDDGRAVRPESSGKMER 861 Query: 59 LEVIIEKAN--AAPIIVAYHFN-------SDLARLQ----KAFPQGRTLDKDPCTIQEWN 105 + I++ ++ + S L R G + ++ + Sbjct: 862 MLEILDSIADVGESALIFTQYVGMGELLVSMLGRKYGKQPYFLHGGVQKRERDEMVRAFQ 921 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + G GLNL N ++ + WW+ +E R + G R Sbjct: 922 AGEGTEFFVLSLKAGGVGLNLTR-ANHVLHYDRWWNPA-----VENQATDRVFRIGQNRN 975 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ LI+Q T++E + + + K + + ++ + + Sbjct: 976 VQVHKLISQGTLEERIDELIEQKKALSEQVVGSGE 1010 >gi|298693629|gb|ADI96851.1| putative DNA helicase [Staphylococcus aureus subsp. aureus ED133] Length = 455 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y K ++ + + + A N AS + K LQL+NGAV Y +++ + +HD+K+ LE Sbjct: 257 KVYEKLEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDDEDVRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARI 451 >gi|225619641|ref|YP_002720898.1| superfamily II D/R helicase [Brachyspira hyodysenteriae WA1] gi|225214460|gb|ACN83194.1| HepA, Superfamily II D/R helicase, SNF2 family [Brachyspira hyodysenteriae WA1] Length = 1033 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 22/215 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ + +R+ + S + Q+ ++ + K Sbjct: 821 IEIFETVKRKGFAQ------SHIEIFSALTRLRQVCCHPRLMHDDLRGESHTSGKFHMFI 874 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGKIP 110 +I++ + ++V F L ++ F + +N G+ P Sbjct: 875 EMIKEAISGGHSVLVFSSFTRMLNLMRSAFKKLGIDYFYLDGATKDRMDLVHRFNAGEAP 934 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GL L + ++ + LWW+ +E R + G KR V Y L Sbjct: 935 IFLLSLKAAGTGLTLTQ-ADTVMHYDLWWNPA-----VEDQATDRAYRIGQKRVVTNYKL 988 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I + TI+E +L+ K + D ++ + + Sbjct: 989 ITRGTIEEKILELQNKKRLLIDTVVGDSMGDINKL 1023 >gi|302527381|ref|ZP_07279723.1| SNF2/RAD54 family helicase [Streptomyces sp. AA4] gi|302436276|gb|EFL08092.1| SNF2/RAD54 family helicase [Streptomyces sp. AA4] Length = 873 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 76/219 (34%), Gaps = 22/219 (10%) Query: 3 QYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y REL D+ Q+ N + E + K++ Sbjct: 646 LYEATVRELMADIAASDGMARRGRVVKLLAALKQICNHPAQFLGEPADSTLAGRSGKLEL 705 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE 106 L+ +++ ++V + L++ G + + + + Sbjct: 706 LDELLDTILAEDGAVLVFTQYVVMARLLERHLAARGVPSRLLHGGTPVARREELVCGFQN 765 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G +P+ + G GL L + +V + WW+ +E R + G R V Sbjct: 766 GDVPVFLLSLKAAGTGLTLTR-ADHVVHYDRWWNPA-----VEDQATDRAYRIGQTRPVQ 819 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ L+A+ T+++ + LR K + D +L + + + Sbjct: 820 VHRLVAEGTVEDRIAAMLREKRALADAVLASGEAALTEL 858 >gi|118480284|ref|YP_897435.1| SNF2 family helicase [Bacillus thuringiensis str. Al Hakam] gi|196045586|ref|ZP_03112816.1| putative helicase [Bacillus cereus 03BB108] gi|118419509|gb|ABK87928.1| SNF2 family helicase [Bacillus thuringiensis str. Al Hakam] gi|196023417|gb|EDX62094.1| putative helicase [Bacillus cereus 03BB108] Length = 918 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|325270384|ref|ZP_08136989.1| helicase [Prevotella multiformis DSM 16608] gi|324987328|gb|EGC19306.1| helicase [Prevotella multiformis DSM 16608] Length = 1326 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M Y +RE ++ + ++ ++ + Q+A D ++ K+ A Sbjct: 1107 MAMYEVRRRETEEKVRANAADKVSTLAEITRLRQMACSCSLVD---RKWKLPSSKVLAFI 1163 Query: 61 VIIEKAN--AAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + E N +V F S L + + +Q++ G+ Sbjct: 1164 DLAESLNDSGNRALVFSQFTSFLDEVRRAMDKARLPYLYLDGSTPMAQREKLVQDFQTGR 1223 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N ++ WW+ Q R + G K+ V VY Sbjct: 1224 CPFFLISLKAGGLGLNLT-GANYVIHLDPWWNPAIEQ-----QATDRAYRIGQKQEVTVY 1277 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +LI+Q+TI+E +L+ RTK + D LL Sbjct: 1278 HLISQHTIEEKILRLHRTKRNLSDSLLEG 1306 >gi|253699069|ref|YP_003020258.1| SNF2-related protein [Geobacter sp. M21] gi|251773919|gb|ACT16500.1| SNF2-related protein [Geobacter sp. M21] Length = 901 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + ++L L+ + + + Q+ N + + + K L Sbjct: 670 LYRQGVQDLARSLKEKAGMERRGLVLAALTRFKQICNHPSQALGDGEYGAGNSGKYDRLR 729 Query: 61 VIIEKAN--AAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 I E+ ++V F R G + + + + E Sbjct: 730 EICEEIESRGEKVLVFSQFKEMALQLTSFLGTVFGRSGLVLHGGTPVAERQRIVDRFQHE 789 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P L + G GLNL + ++ F WW+ +E R + G KR V Sbjct: 790 DGPPFLVLSLKAGGTGLNLTA-ASQVIHFDRWWNPA-----VENQATDRAFRIGQKRNVL 843 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ + + T++E + + K+ + +L Sbjct: 844 VHKFVCRGTVEEKIDALIAEKTRLAVDILEG 874 >gi|254443939|ref|ZP_05057415.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] gi|198258247|gb|EDY82555.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] Length = 799 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 81/218 (37%), Gaps = 22/218 (10%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K+Y E L+ G++ AFN ++ Q+ D ++V K+ Sbjct: 577 KRYDLELDEARAMLKSAKEGGQSTGAFNVLQALLRLRQICCDPELLDTSGDREDVESAKM 636 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNE 106 +AL ++E A ++V F S L ++ + ++ + + Sbjct: 637 QALLDLLEPLVAEGHKVLVFSQFVSLLEIAERELHAIGIGSLKLTGKTKRRGELVEHFQK 696 Query: 107 GKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GL L + +V WW+ +E + R + G K V Sbjct: 697 GNEEQVFLLSLKAAGSGLTLTA-ASYVVLLDPWWNPA-----VEAQAIDRAHRIGQKDQV 750 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 Y ++A++T++E + + KS + L E+ Sbjct: 751 IAYRILAKDTVEEKIRKIQAEKSELAAALFGEGGGEST 788 >gi|217962731|ref|YP_002341307.1| SNF2 family helicase [Bacillus cereus AH187] gi|222098706|ref|YP_002532764.1| helicase, putative [Bacillus cereus Q1] gi|217063978|gb|ACJ78228.1| SNF2 family helicase [Bacillus cereus AH187] gi|221242765|gb|ACM15475.1| helicase, putative [Bacillus cereus Q1] Length = 918 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEKHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|225867216|ref|YP_002752594.1| putative helicase [Bacillus cereus 03BB102] gi|225786779|gb|ACO26996.1| putative helicase [Bacillus cereus 03BB102] Length = 918 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|196036261|ref|ZP_03103659.1| putative helicase [Bacillus cereus W] gi|218906422|ref|YP_002454256.1| putative helicase [Bacillus cereus AH820] gi|195991053|gb|EDX55023.1| putative helicase [Bacillus cereus W] gi|218539910|gb|ACK92308.1| putative helicase [Bacillus cereus AH820] Length = 918 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|206976890|ref|ZP_03237792.1| SNF2 family helicase [Bacillus cereus H3081.97] gi|206744856|gb|EDZ56261.1| SNF2 family helicase [Bacillus cereus H3081.97] Length = 918 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEKHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|297203431|ref|ZP_06920828.1| SNF2/RAD54 family helicase [Streptomyces sviceus ATCC 29083] gi|297148407|gb|EFH28976.1| SNF2/RAD54 family helicase [Streptomyces sviceus ATCC 29083] Length = 297 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 75/223 (33%), Gaps = 26/223 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEE------KHWKEVHDE 54 Y RE ++ A Q+ + Y +E Sbjct: 66 LYEAVVRESLLAIETAQGIARRGLVLKLLGALKQICDHPALYLKEEVPPTAGERLVARSG 125 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 K+ L+ +++ +V + + G + + + Sbjct: 126 KLALLDELLDTLLAEDGSALVFTQYVGMARLITAHLAARAVPVDLLHGGTPVPERERMVD 185 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G IP+L + G GLNL G+ +V F WW+ +E R + G Sbjct: 186 RFQSGAIPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEEQATDRAYRIGQT 239 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V V+ LI + T+++ + + L +K + D +L + + + Sbjct: 240 QPVQVHRLITEGTVEDRIAEMLESKRALADAILGSGESALTEL 282 >gi|254724328|ref|ZP_05186112.1| putative helicase [Bacillus anthracis str. A1055] Length = 918 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|315197730|gb|EFU28064.1| possible helicase [Staphylococcus aureus subsp. aureus CGS01] Length = 452 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAVY DE + + +HD+K+ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDE-EDVRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LDDSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARI 448 >gi|38637840|ref|NP_942814.1| helicase superfamily protein II [Ralstonia eutropha H16] gi|32527178|gb|AAP85928.1| putative helicase, superfamily II [Ralstonia eutropha H16] Length = 892 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 72/211 (34%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + ++L L+ + S ++ Q+ N + + WK K L Sbjct: 660 LYQRAVKDLAAALEDADGIGRKGVVLSYLMRFKQICNHPSQWLGDAAWKAEDSGKFARLR 719 Query: 61 VI--IEKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 + + A ++V F R G + K ++ + + Sbjct: 720 QLAEVIAAKQEKVLVFTQFRETTEPLAAFLGSIFGREGLVLHGGTPVAKRRELVKRFQED 779 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + G GLNL + ++ + WW+ +E R + G +R V Sbjct: 780 ELTPFFVLSLKAGGAGLNLTA-ASHVIHYDRWWNPA-----VENQATDRAFRIGQRRNVL 833 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + T+++ + Q + K + +L Sbjct: 834 VHKFICRGTVEDRIDQLIEAKQQLVKDVLEG 864 >gi|196039505|ref|ZP_03106810.1| putative helicase [Bacillus cereus NVH0597-99] gi|196029665|gb|EDX68267.1| putative helicase [Bacillus cereus NVH0597-99] Length = 918 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|117921236|ref|YP_870428.1| SNF2-like protein [Shewanella sp. ANA-3] gi|117613568|gb|ABK49022.1| SNF2-related protein [Shewanella sp. ANA-3] Length = 1082 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++++ + + + +K Q E+ K ++ K+ Sbjct: 860 LYESIRLSMEKKIRELFATQGVAGSHIEFLDALLKLRQACCDPRLVKLEQAQKVKNNAKL 919 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNE 106 L + + I++ F S L +++ I ++ E Sbjct: 920 NWLNQNLPEMVQEGRKILIFSQFTSMLLLIEELLQSLNIDYSKLTGQTRLRQGQIDKFQE 979 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ E+ R + G + VF Sbjct: 980 GDTPVFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----EKQATDRAHRIGQENPVF 1033 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA+ T++E + + + K + D +L Sbjct: 1034 VYKLIAEGTVEEKIQEMQQHKQGLADSILEG 1064 >gi|258646424|ref|ZP_05733893.1| SNF2 domain protein [Dialister invisus DSM 15470] gi|260403827|gb|EEW97374.1| SNF2 domain protein [Dialister invisus DSM 15470] Length = 459 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 114/203 (56%), Gaps = 10/203 (4%) Query: 4 YHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y++ ++++ DL +++ + ++A+ + K QLANGAV Y ++ W+E+H++KI+A + Sbjct: 256 YNELEKKMVLDLGDDHVLDVTSAAALSNKLQQLANGAV-YTDDGGWQEIHNDKIEAFMEL 314 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPASC 119 IE+ N IV Y+F DL RL+ A + + +WN GK+ +L AHPAS Sbjct: 315 IEQLNGKHAIVFYNFRHDLDRLRAALQKTNLHIRQLQTSADELDWNAGKVDILLAHPAST 374 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GLNLQ GGN +V+F L W LE +Q R + G K V V+ LI + T DE Sbjct: 375 AYGLNLQDGGNHVVWFGLNWSLELYQ-----QANKRLHRQGQKNRVIVHQLICEGTRDED 429 Query: 180 VLQRLRTKSTIQDLLLNALKKET 202 + + L K Q ++++LK Sbjct: 430 LARALLMKDAAQQYVMDSLKARV 452 >gi|107100261|ref|ZP_01364179.1| hypothetical protein PaerPA_01001285 [Pseudomonas aeruginosa PACS2] Length = 773 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 26/221 (11%) Query: 2 KQYHKFQ----RELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHW----KEV 51 + Y + R++ ++ G +K Q+ ++ + + Sbjct: 540 ELYETVRLALDRKVREEIARRGLARSRIVILEALLKLRQVCCDTRLLQRQEDGARSGRAL 599 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTI 101 K+ L ++++ A +++ F S LA ++ A Q + Sbjct: 600 SSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRRAPV 659 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q + GK+P+ + G GLNL + ++ + WW+ +E R + G Sbjct: 660 QRFQSGKVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQASDRAYRIGQ 713 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + K+ + D L + + Sbjct: 714 DKPVFVYRLIARGTVEEKIQHLQQEKAALADGLFSEGNGDG 754 >gi|329927070|ref|ZP_08281440.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] gi|328938698|gb|EGG35076.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] Length = 1030 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 73/215 (33%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYD--EEKHWKEVHDEKIKA 58 Y E+ ++ A K Q+ + + + + K++ Sbjct: 802 MYQAVVDEMMGQIESRTGMARKGLVLSSLTKLKQICDHPQLLRRDDGRAVRPESSGKMER 861 Query: 59 LEVIIEKAN--AAPIIVAYHFN-------SDLARLQ----KAFPQGRTLDKDPCTIQEWN 105 + I++ ++ + S L R G + ++ + Sbjct: 862 MLEILDSIADVGESALIFTQYVGMGELLVSMLGRKYGKQPYFLHGGVQKRERDEMVRAFQ 921 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ + G GLNL N ++ + WW+ +E R + G R Sbjct: 922 AGEGTEFFVLSLKAGGVGLNLTR-ANHVLHYDRWWNPA-----VENQATDRVFRIGQNRN 975 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ LI+Q T++E + + + K + + ++ + + Sbjct: 976 VQVHKLISQGTLEERIDELIEQKKALSEQVVGSGE 1010 >gi|324329191|gb|ADY24451.1| helicase, putative [Bacillus thuringiensis serovar finitimus YBT-020] Length = 918 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 73/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K + K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKNIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEKHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|30265272|ref|NP_847649.1| helicase, putative [Bacillus anthracis str. Ames] gi|47530804|ref|YP_022153.1| helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49188082|ref|YP_031335.1| helicase [Bacillus anthracis str. Sterne] gi|65317216|ref|ZP_00390175.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Bacillus anthracis str. A2012] gi|165870042|ref|ZP_02214699.1| putative helicase [Bacillus anthracis str. A0488] gi|167636534|ref|ZP_02394830.1| putative helicase [Bacillus anthracis str. A0442] gi|167641825|ref|ZP_02400066.1| putative helicase [Bacillus anthracis str. A0193] gi|170689422|ref|ZP_02880614.1| putative helicase [Bacillus anthracis str. A0465] gi|170708948|ref|ZP_02899380.1| putative helicase [Bacillus anthracis str. A0389] gi|177654075|ref|ZP_02936085.1| putative helicase [Bacillus anthracis str. A0174] gi|190567743|ref|ZP_03020655.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|227818007|ref|YP_002818016.1| putative helicase [Bacillus anthracis str. CDC 684] gi|229602583|ref|YP_002869461.1| putative helicase [Bacillus anthracis str. A0248] gi|254686332|ref|ZP_05150191.1| putative helicase [Bacillus anthracis str. CNEVA-9066] gi|254735172|ref|ZP_05192881.1| putative helicase [Bacillus anthracis str. Western North America USA6153] gi|254737051|ref|ZP_05194756.1| putative helicase [Bacillus anthracis str. Western North America USA6153] gi|254744378|ref|ZP_05202058.1| putative helicase [Bacillus anthracis str. Kruger B] gi|254755680|ref|ZP_05207713.1| putative helicase [Bacillus anthracis str. Vollum] gi|254759588|ref|ZP_05211613.1| putative helicase [Bacillus anthracis str. Australia 94] gi|30259950|gb|AAP29135.1| putative helicase [Bacillus anthracis str. Ames] gi|47505952|gb|AAT34628.1| putative helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49182009|gb|AAT57385.1| helicase, putative [Bacillus anthracis str. Sterne] gi|164714365|gb|EDR19885.1| putative helicase [Bacillus anthracis str. A0488] gi|167510237|gb|EDR85642.1| putative helicase [Bacillus anthracis str. A0193] gi|167528066|gb|EDR90866.1| putative helicase [Bacillus anthracis str. A0442] gi|170126113|gb|EDS95008.1| putative helicase [Bacillus anthracis str. A0389] gi|170666649|gb|EDT17420.1| putative helicase [Bacillus anthracis str. A0465] gi|172080958|gb|EDT66037.1| putative helicase [Bacillus anthracis str. A0174] gi|190561159|gb|EDV15132.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|227003185|gb|ACP12928.1| putative helicase [Bacillus anthracis str. CDC 684] gi|229266991|gb|ACQ48628.1| putative helicase [Bacillus anthracis str. A0248] Length = 918 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|225174512|ref|ZP_03728511.1| Non-specific serine/threonine protein kinase [Dethiobacter alkaliphilus AHT 1] gi|225170297|gb|EEG79092.1| Non-specific serine/threonine protein kinase [Dethiobacter alkaliphilus AHT 1] Length = 1185 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + + + Q+ N V++ + + K + Sbjct: 959 LYQQIVEREMSAVSESSGMERRGRILALMTSLKQICNHPVHFSKNGAPYPQNSGKAQLAF 1018 Query: 61 VIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEW-NE 106 ++ + + ++ + L + F T + I+E+ N Sbjct: 1019 QLLRQILQDGEKALIFTQYKQMGDILIRMLEAELNQPLPFFHGSLTPKQREQRIEEFQNN 1078 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 PL+ + G GLNL ++ + LWW+ +E R + G + V Sbjct: 1079 PHTPLMVVSLKAGGTGLNLTA-ATHVLHYDLWWNPA-----VEDQATDRAYRIGQTKNVT 1132 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V+ I T++E + L K + DL ++A + Sbjct: 1133 VHRFITLGTLEEKIDTILTAKKDLADLTISAGE 1165 >gi|254443232|ref|ZP_05056708.1| Type III restriction enzyme, res subunit family [Verrucomicrobiae bacterium DG1235] gi|198257540|gb|EDY81848.1| Type III restriction enzyme, res subunit family [Verrucomicrobiae bacterium DG1235] Length = 824 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 77/217 (35%), Gaps = 26/217 (11%) Query: 2 KQYHKFQRELYCDLQGENIE-------AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y ++ ++ + ++ ++ Q D+ Sbjct: 602 KTYEAARQNAEAEISQLEKSGASEGALRMKTLTQLLRLRQTCCDPRLLDKSLDATA--SS 659 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQE 103 K+ + ++E+ I+V F S L+ L+ + G T ++ + Sbjct: 660 KLNSFLELLEESIDGGHRILVFSQFVSLLSILKEQLDSENIPYCYIDGSTRNRMAEVDRF 719 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + IP+ + G GLNL + +V F WW+ E R + G + Sbjct: 720 NDSDDIPIFLISLKAGGTGLNLTA-ADTVVHFDPWWNPAA-----EAQATDRAHRIGQTK 773 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V Y LI ++++E VLQ + K + + + A + Sbjct: 774 VVTSYKLIVSDSVEEKVLQLQQQKRKLLEDVFEASEA 810 >gi|49481223|ref|YP_039235.1| SNF2 family helicase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332779|gb|AAT63425.1| SNF2 family helicase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 918 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEKHFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|296390849|ref|ZP_06880324.1| helicase [Pseudomonas aeruginosa PAb1] Length = 773 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 26/221 (11%) Query: 2 KQYHKFQ----RELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHW----KEV 51 + Y + R++ ++ G +K Q+ ++ + + Sbjct: 540 ELYETVRLALDRKVREEIARRGLARSRIVILEALLKLRQVCCDTRLLQRQEDGARSGRAL 599 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTI 101 K+ L ++++ A +++ F S LA ++ A Q + Sbjct: 600 SSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRRAPV 659 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q + GK+P+ + G GLNL + ++ + WW+ +E R + G Sbjct: 660 QRFQSGKVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQASDRAYRIGQ 713 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + K+ + D L + + Sbjct: 714 DKPVFVYRLIARGTVEEKIQHLQQEKAALADGLFSEGNGDG 754 >gi|313105624|ref|ZP_07791890.1| putative helicase [Pseudomonas aeruginosa 39016] gi|310878392|gb|EFQ36986.1| putative helicase [Pseudomonas aeruginosa 39016] Length = 773 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 26/221 (11%) Query: 2 KQYHKFQ----RELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHW----KEV 51 + Y + R++ ++ G +K Q+ ++ + + Sbjct: 540 ELYETVRLALDRKVREEIARRGLARSRIVILEALLKLRQVCCDTRLLQRQEDGARSGRAL 599 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTI 101 K+ L ++++ A +++ F S LA ++ A Q + Sbjct: 600 SSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRRAPV 659 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q + GK+P+ + G GLNL + ++ + WW+ +E R + G Sbjct: 660 QRFQSGKVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQASDRAYRIGQ 713 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + K+ + D L + + Sbjct: 714 DKPVFVYRLIARGTVEEKIQHLQQEKAALADGLFSEGNGDG 754 >gi|317482426|ref|ZP_07941443.1| SNF2 family domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|316916086|gb|EFV37491.1| SNF2 family domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] Length = 1394 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L+ ++ K Q+ + + K+ Sbjct: 1157 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ---SAKL 1213 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 A+ ++ ++ F S L K + ++ Sbjct: 1214 AAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQF 1273 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P + GLNL G ++++ WW+ R + G Sbjct: 1274 NADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQD-----QATDRAHRIGQTED 1327 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1328 VNVYQVVAKDTIEERILELQHTKSELARQFTDA 1360 >gi|312134029|ref|YP_004001368.1| superfamily ii DNA/RNA helicase [Bifidobacterium longum subsp. longum BBMN68] gi|311773336|gb|ADQ02824.1| Superfamily II DNA/RNA helicase [Bifidobacterium longum subsp. longum BBMN68] Length = 1286 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L+ ++ K Q+ + + K+ Sbjct: 1049 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ---SAKL 1105 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 A+ ++ ++ F S L K + ++ Sbjct: 1106 AAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQF 1165 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P + GLNL G ++++ WW+ R + G Sbjct: 1166 NADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQD-----QATDRAHRIGQTED 1219 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1220 VNVYQVVAKDTIEERILELQHTKSELARQFTDA 1252 >gi|296454690|ref|YP_003661833.1| SNF2-like protein [Bifidobacterium longum subsp. longum JDM301] gi|296184121|gb|ADH01003.1| SNF2-related protein [Bifidobacterium longum subsp. longum JDM301] Length = 1420 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L+ ++ K Q+ + + K+ Sbjct: 1183 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ---SAKL 1239 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 A+ ++ ++ F S L K + ++ Sbjct: 1240 AAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQF 1299 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P + GLNL G ++++ WW+ R + G Sbjct: 1300 NADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQD-----QATDRAHRIGQTED 1353 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1354 VNVYQVVAKDTIEERILELQHTKSELARQFTDA 1386 >gi|239621668|ref|ZP_04664699.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515543|gb|EEQ55410.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 1388 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L+ ++ K Q+ + + K+ Sbjct: 1151 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ---SAKL 1207 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 A+ ++ ++ F S L K + ++ Sbjct: 1208 AAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQF 1267 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P + GLNL G ++++ WW+ R + G Sbjct: 1268 NADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQD-----QATDRAHRIGQTED 1321 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1322 VNVYQVVAKDTIEERILELQHTKSELARQFTDA 1354 >gi|213691499|ref|YP_002322085.1| SNF2-related protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522960|gb|ACJ51707.1| SNF2-related protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457574|dbj|BAJ68195.1| putative helicase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 1423 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L+ ++ K Q+ + + K+ Sbjct: 1186 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ---SAKL 1242 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 A+ ++ ++ F S L K + ++ Sbjct: 1243 AAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQF 1302 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P + GLNL G ++++ WW+ R + G Sbjct: 1303 NADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQD-----QATDRAHRIGQTED 1356 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1357 VNVYQVVAKDTIEERILELQHTKSELARQFTDA 1389 >gi|189440776|ref|YP_001955857.1| superfamily II DNA/RNA helicase [Bifidobacterium longum DJO10A] gi|189429211|gb|ACD99359.1| Superfamily II DNA/RNA helicase [Bifidobacterium longum DJO10A] Length = 1394 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L+ ++ K Q+ + + K+ Sbjct: 1157 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ---SAKL 1213 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 A+ ++ ++ F S L K + ++ Sbjct: 1214 AAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQF 1273 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P + GLNL G ++++ WW+ R + G Sbjct: 1274 NADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQD-----QATDRAHRIGQTED 1327 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1328 VNVYQVVAKDTIEERILELQHTKSELARQFTDA 1360 >gi|171909776|ref|ZP_02925246.1| SNF2-related protein [Verrucomicrobium spinosum DSM 4136] Length = 916 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 71/213 (33%), Gaps = 23/213 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y + L +L + + +K Q+ N + + + K + Sbjct: 681 QLYQRVVTALARELGDTEDQIQRQGVILAALMKLKQICNHPSQWSGDSRYLPADSGKFQR 740 Query: 59 LEVIIEKANAA--PIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 LE + +IV F R G + K ++E+ Sbjct: 741 LEELCSGIADRQEKVIVFTQFKEMTLPVADYLATVFGRPGLVLHGGTAVGKRGQLVEEFQ 800 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G P + G GL L + ++ F WW+ +E R + G +A Sbjct: 801 SPGGPPFFVISVKAGGTGLTLTA-ASHVIHFDRWWNPA-----VEDQATDRAYRIGQTKA 854 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + Q T++E + +R K + + +L Sbjct: 855 VMVHKFVCQGTLEEKIDGIIREKRALANEILGG 887 >gi|23466281|ref|NP_696884.1| helicase [Bifidobacterium longum NCC2705] gi|322689764|ref|YP_004209498.1| helicase [Bifidobacterium longum subsp. infantis 157F] gi|322691713|ref|YP_004221283.1| helicase [Bifidobacterium longum subsp. longum JCM 1217] gi|23327031|gb|AAN25520.1| possible helicase [Bifidobacterium longum NCC2705] gi|320456569|dbj|BAJ67191.1| putative helicase [Bifidobacterium longum subsp. longum JCM 1217] gi|320461100|dbj|BAJ71720.1| putative helicase [Bifidobacterium longum subsp. infantis 157F] Length = 1394 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L+ ++ K Q+ + + K+ Sbjct: 1157 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ---SAKL 1213 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 A+ ++ ++ F S L K + ++ Sbjct: 1214 AAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQF 1273 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P + GLNL G ++++ WW+ R + G Sbjct: 1274 NADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQD-----QATDRAHRIGQTED 1327 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1328 VNVYQVVAKDTIEERILELQHTKSELARQFTDA 1360 >gi|46190976|ref|ZP_00120784.2| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Bifidobacterium longum DJO10A] Length = 1062 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L+ ++ K Q+ + + K+ Sbjct: 825 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ---SAKL 881 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 A+ ++ ++ F S L K + ++ Sbjct: 882 AAITELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQF 941 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P + GLNL G ++++ WW+ R + G Sbjct: 942 NADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQD-----QATDRAHRIGQTED 995 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 996 VNVYQVVAKDTIEERILELQHTKSELARQFTDA 1028 >gi|330829013|ref|YP_004391965.1| SWI/SNF family helicase [Aeromonas veronii B565] gi|328804149|gb|AEB49348.1| SWI/SNF family helicase [Aeromonas veronii B565] Length = 1291 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +RE+ +Q + A + S + +L E K+ Sbjct: 1074 QLYEATRREVVQQVQSADGRALMHVLSGLTRLRRLCCSPELVMPEWSQT---SSKLDEAM 1130 Query: 61 VIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++E+ ++V F L+ G + +I + + Sbjct: 1131 ALLEEAIDGGHRVLVFSQFVDLLSLLRARIEQKSWDYCYLDGGCSAKSRQDSILRFRHEE 1190 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +PL + G GLNL + ++ WW+ +E R + G + V VY Sbjct: 1191 VPLFLISLKAGGTGLNLTQ-ADTVLHLDPWWNPA-----VEDQASDRAHRMGQTQPVTVY 1244 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + T++E ++ K + D LL+ Sbjct: 1245 RLVCEQTVEEKIVALHDEKRALADGLLSG 1273 >gi|329943269|ref|ZP_08292043.1| helicase conserved C-terminal domain protein [Chlamydophila psittaci Cal10] gi|313848419|emb|CBY17423.1| putative DNA helicase-related protein [Chlamydophila psittaci RD1] gi|325506669|gb|ADZ18307.1| putative DNA helicase [Chlamydophila psittaci 6BC] gi|328814816|gb|EGF84806.1| helicase conserved C-terminal domain protein [Chlamydophila psittaci Cal10] gi|328915108|gb|AEB55941.1| helicase, Snf2/Rad54 family [Chlamydophila psittaci 6BC] Length = 1205 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 85/222 (38%), Gaps = 24/222 (10%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DE 54 K Y + + + + + + + Q+ N + + H Sbjct: 956 KLYLSTLKREKAQIQQLESPEEQTVNYLHVFALLNHLKQICNHPAIFFKNPDKYREHESG 1015 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQE 103 K +A ++ + + ++V + + + + A QG++L++ Sbjct: 1016 KWEAFVRLLHDSLSSGYKVVVFSQYIHMIRIIMLYLEEIGVKYASIQGKSLNRKEEIEYF 1075 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1076 TTDPECRVFVGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQKN 1129 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + D +++ +H+ Sbjct: 1130 TVFIYKLMTEDTLEERIHYLIEKKIRLLDKVISTQDSNILHM 1171 >gi|15615476|ref|NP_243779.1| SNF2 helicase [Bacillus halodurans C-125] gi|10175535|dbj|BAB06632.1| SNF2 helicase [Bacillus halodurans C-125] Length = 995 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 77/219 (35%), Gaps = 22/219 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + L K Q+ N ++ ++K+ EK + L Sbjct: 772 LYQAVVDNMVHQLGDVTHMERRALILKTLTKLKQICNHPAHFLKDKNVDAHQSEKWELLL 831 Query: 61 VIIEKANAA--PIIVAYHFNSDLARLQKAFPQG------------RTLDKDPCTIQEWNE 106 + E+ +++ F +Q AF + + N+ Sbjct: 832 TLSEQIMDRQEKMLIFTQFKEMGHLMQDAFQSQIGTPIPFLHGSLSRQQRQEAVERFQND 891 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++P+ + G GLNL N ++ + WW+ +E R + G V Sbjct: 892 RELPIFILSLKAGGVGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQTADVT 945 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ L+ + T++E + Q L +K + + +L A + + + Sbjct: 946 VHKLMTEGTLEERIHQMLESKQALAEQILTAGENQLTEL 984 >gi|29028643|ref|NP_803332.1| helicase [Staphylococcus phage phi 12] gi|18920567|gb|AAL82307.1| phage helicase [Staphylococcus phage phi 12] Length = 423 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y +++ + +HD+K+ LE Sbjct: 225 KVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDDEDVRLIHDKKLDKLE 283 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 284 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 342 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 343 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 397 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 398 YKALQNKELTQEELMKAIKARI 419 >gi|161509685|ref|YP_001575344.1| helicase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|294848484|ref|ZP_06789230.1| helicase [Staphylococcus aureus A9754] gi|160368494|gb|ABX29465.1| possible helicase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|294824510|gb|EFG40933.1| helicase [Staphylococcus aureus A9754] gi|320140665|gb|EFW32519.1| protein, SNF2 family [Staphylococcus aureus subsp. aureus MRSA131] gi|320142763|gb|EFW34566.1| protein, SNF2 family [Staphylococcus aureus subsp. aureus MRSA177] Length = 455 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAVY DE + + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDE-EDVRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LDDSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARI 451 >gi|114562478|ref|YP_749991.1| SNF2-related protein [Shewanella frigidimarina NCIMB 400] gi|114333771|gb|ABI71153.1| SNF2-related protein [Shewanella frigidimarina NCIMB 400] Length = 1070 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 73/211 (34%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +++L + + + + +K Q E+ + + K+ Sbjct: 848 LYESIRLVMEKKLRELFAKKGVSSSHIEFLDALLKLRQACCDPRLVKLEQAQQVKDNAKM 907 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNE 106 L + + I++ F LA ++ I + E Sbjct: 908 TWLIQNLPEMIEEGRKILIFSQFTGMLALIEDELKRLTISYSKLTGQTRDRQTQIDAFQE 967 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + + G GLNL + ++ F WW+ ER R + G VF Sbjct: 968 GDNSVFLISLKAGGTGLNLTA-ADTVIHFDPWWNPAA-----ERQATDRAHRIGQLNPVF 1021 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIAQ T++E + + + K + D +L+ Sbjct: 1022 VYKLIAQGTVEEKIQEMQQHKQGLADSILSD 1052 >gi|253573733|ref|ZP_04851076.1| non-specific serine/threonine protein kinase [Paenibacillus sp. oral taxon 786 str. D14] gi|251847261|gb|EES75266.1| non-specific serine/threonine protein kinase [Paenibacillus sp. oral taxon 786 str. D14] Length = 1111 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 70/212 (33%), Gaps = 27/212 (12%) Query: 2 KQY----HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K Q+E L + + + QL + + K Sbjct: 888 KLYLAYLAKLQQETLKHLDADTFGQNRIRILAGLTRLRQLCCHPALFVDGYD---GGSAK 944 Query: 56 IKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 L +IE+ +++ F L + Sbjct: 945 FDQLMEMIEECQSAGKRVLIFSQFTEMLGLIGRELGYRGLPFFYLDGKTPAAERVELCSR 1004 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G+ L + G GLNL G + ++ + LWW+ Q R + G K Sbjct: 1005 FNDGERDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRIGQKN 1058 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V ++AQ T+++ + + + K + + +L Sbjct: 1059 IVHVIRMVAQGTVEDKMYELQQKKKHLVEEVL 1090 >gi|227546637|ref|ZP_03976686.1| helicase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212954|gb|EEI80833.1| helicase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 1394 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L+ ++ K Q+ + + K+ Sbjct: 1157 KLYAAHEQRLRMQLEHSEEADFNTSKIRILAELTKLRQICCDPRLLYADAKDQ---SAKL 1213 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 A+ ++ ++ F S L K + ++ Sbjct: 1214 AAITDLVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQF 1273 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P + GLNL G ++++ WW+ R + G Sbjct: 1274 NADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQD-----QATDRAHRIGQTED 1327 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1328 VNVYQVVAKDTIEERILELQHTKSELARQFTDA 1360 >gi|62185500|ref|YP_220285.1| putative DNA helicase-related protein [Chlamydophila abortus S26/3] gi|62148567|emb|CAH64339.1| putative DNA helicase-related protein [Chlamydophila abortus S26/3] Length = 1206 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 85/222 (38%), Gaps = 24/222 (10%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DE 54 K Y + + + + + + + Q+ N + + H Sbjct: 956 KLYLSTLKREKAQIQQLESPEEQTVNYLHVFALLNHLKQICNHPAIFFKNPDKYREHESG 1015 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQE 103 K +A ++ + + ++V + + + + A QG++L++ Sbjct: 1016 KWEAFVRLLHDSLSSGYKVVVFSQYIHMIRIIMLYLEEIGVKYASIQGKSLNRKEEIEYF 1075 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1076 TTDPECRVFVGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQKN 1129 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + D +++ +H+ Sbjct: 1130 TVFIYKLMTEDTLEERIHYLIEKKIRLLDKVISTQDSNILHM 1171 >gi|218233440|ref|YP_002370024.1| putative helicase [Bacillus cereus B4264] gi|218161397|gb|ACK61389.1| putative helicase [Bacillus cereus B4264] Length = 918 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|218900369|ref|YP_002448780.1| putative helicase [Bacillus cereus G9842] gi|218544351|gb|ACK96745.1| putative helicase [Bacillus cereus G9842] Length = 918 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEQFGQRVLFLNGSVPKKDRDKMIEEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|312794614|ref|YP_004027537.1| SNF2-like protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181754|gb|ADQ41924.1| SNF2-related protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 1108 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 77/209 (36%), Gaps = 23/209 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K + E + +G S + Q+ + E E K++ E Sbjct: 892 LKAREDIKNE--IEQKGFEKSKIKIFSILTRLRQICCHPKLFLENY---EGSSGKLELFE 946 Query: 61 VIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGK 108 I+E + IV + L ++ +N G+ Sbjct: 947 EILEDVLESGHRAIVFSQWTEMLRILEERIKDRGFEYFYLDGSTKSEERIDMANSFNSGQ 1006 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G ++++ + LWW+ +E + R + G + +V V+ Sbjct: 1007 KQVFLISLKAGGFGLNLT-GADVVILYDLWWNPA-----VENQAMDRAHRIGQENSVQVF 1060 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI +NTI+E + + + K + D ++ + Sbjct: 1061 RLITKNTIEERIFELQQKKKDLFDSIVQS 1089 >gi|229175913|ref|ZP_04303410.1| Helicase, SNF2/RAD54 [Bacillus cereus MM3] gi|228607507|gb|EEK64832.1| Helicase, SNF2/RAD54 [Bacillus cereus MM3] Length = 855 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 73/210 (34%), Gaps = 23/210 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ LI T++E + + L K ++ + ++ Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVI 835 >gi|239623482|ref|ZP_04666513.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521513|gb|EEQ61379.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 1088 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 84/225 (37%), Gaps = 32/225 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK K + + + ++ ++ QL E + K++ Sbjct: 869 MKLKEKLESGGFSESGDG---RLQILAELMRLRQLCCDPRLCYENYKHE---SAKLETCM 922 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK 108 ++ + + I++ F S L ++ + ++ + E+ Sbjct: 923 DLVRRGISGEHKILLFSQFTSMLELIEKRLSKEGMASHKLTGATSKEERIRMVGEFQRDD 982 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +P+ + G GLNL +I++ + WW++ R + G ++ V VY Sbjct: 983 VPVFLISLKAGGTGLNLTA-ADIVIHYDPWWNVAAQ-----NQATDRTHRIGQEKQVTVY 1036 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA--------LKKETIHV 205 LI +NTI+E +L+ +K + D ++ K++ +++ Sbjct: 1037 KLITRNTIEENILKLQESKQYLADQIVTEGTVSFGSLTKEDILNI 1081 >gi|254412572|ref|ZP_05026346.1| SNF2 family N-terminal domain protein [Microcoleus chthonoplastes PCC 7420] gi|196180882|gb|EDX75872.1| SNF2 family N-terminal domain protein [Microcoleus chthonoplastes PCC 7420] Length = 1061 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 72/215 (33%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y +++ L+ S +K Q+ N + + + K++ L Sbjct: 830 LYEAVVKDVEAKLEDAEGINRKGLILSTLLKLKQVCNHPAQFLQDNSEFSPTRSHKLERL 889 Query: 60 EVIIEKAN--AAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 +IE+ N +++ F L G + K I + + Sbjct: 890 LEMIEEVNAEGESLLIFTQFTDIGSALTNYLKQTLHYNTYYIHGGISRAKREQMITAFQD 949 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + G G+ L N + F WW+ +E R + G K+ Sbjct: 950 PDTEPSAFILSLKAGGVGITLTK-ANHVFHFDRWWNPA-----VEDQATDRAFRIGQKKN 1003 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VFV+ +A T++E + Q + K + ++ A + Sbjct: 1004 VFVHKFVALGTLEERIDQMIEEKKKLSGAIVGADE 1038 >gi|254239157|ref|ZP_04932480.1| hypothetical protein PACG_05345 [Pseudomonas aeruginosa C3719] gi|126171088|gb|EAZ56599.1| hypothetical protein PACG_05345 [Pseudomonas aeruginosa C3719] Length = 663 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 83/221 (37%), Gaps = 26/221 (11%) Query: 2 KQYHKFQ----RELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----V 51 + Y + R++ ++ G +K Q+ ++ + Sbjct: 430 ELYETVRLALDRKVREEIARRGLARSRIVILEALLKLRQVCCDTRLLQRQEDGTRSGRAL 489 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTI 101 K+ L ++++ A +++ F S LA ++ A Q + Sbjct: 490 SSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRRAPV 549 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q + GK+P+ + G GLNL + ++ + WW+ +E R + G Sbjct: 550 QRFQSGKVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQASDRAYRIGQ 603 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + K+ + D L + + Sbjct: 604 DKPVFVYRLIARGTVEEKIQHLQQEKAALADGLFSEGNGDG 644 >gi|206970363|ref|ZP_03231316.1| putative helicase [Bacillus cereus AH1134] gi|206734940|gb|EDZ52109.1| putative helicase [Bacillus cereus AH1134] Length = 918 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|313112827|ref|ZP_07798474.1| protein, SNF2 family [Faecalibacterium cf. prausnitzii KLE1255] gi|310624897|gb|EFQ08205.1| protein, SNF2 family [Faecalibacterium cf. prausnitzii KLE1255] Length = 1100 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 73/217 (33%), Gaps = 22/217 (10%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + ++ ++ + + K+ A Sbjct: 881 KLYLAAVVDAREKLRAAKPEDKMAVFAVLMRLREICCDPRLVADN---WDGGSAKLDACM 937 Query: 61 VIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ I++ F S L ++ +N G+ Sbjct: 938 ELVTAAVEGGHRILLFSQFTSMLELLAKRLDEAGVSHFTLQGSTPKPVRAELVRRFNSGE 997 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL +I++ + WW++ R + G + V VY Sbjct: 998 ADVFLISLRAGGTGLNLTA-ADIVIHYDPWWNVAAQ-----NQATDRAYRIGQRNPVQVY 1051 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 LIAQ+TI+E +++ + K + + + + + + Sbjct: 1052 KLIAQDTIEEKIVELQQAKQDLAETVTGSADGAILSM 1088 >gi|312877116|ref|ZP_07737087.1| SNF2-related protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796090|gb|EFR12448.1| SNF2-related protein [Caldicellulosiruptor lactoaceticus 6A] Length = 1126 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 77/209 (36%), Gaps = 23/209 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K + E + +G S + Q+ + E E K++ E Sbjct: 910 LKAREDIKNE--IEQKGFEKSKIKIFSILTRLRQICCHPKLFLENY---EGSSGKLELFE 964 Query: 61 VIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGK 108 I+E + IV + L ++ +N G+ Sbjct: 965 EILEDVLESGHRAIVFSQWTEMLRILEERIKDRGFEYFYLDGSTKPEERIDMANSFNSGQ 1024 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G ++++ + LWW+ +E + R + G + +V V+ Sbjct: 1025 KQVFLISLKAGGFGLNLT-GADVVILYDLWWNPA-----VENQAMDRAHRIGQENSVQVF 1078 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI +NTI+E + + + K + D ++ + Sbjct: 1079 RLITKNTIEERIFELQQKKKDLFDTIIQS 1107 >gi|254444760|ref|ZP_05058236.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] gi|198259068|gb|EDY83376.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] Length = 831 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 25/217 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 ++Y + E + A + S + Q++ + E K+ Sbjct: 600 REYKRICEEGLARFGDDLGSALRTNRFATLSLLTRLRQVSCDPNLLPWMESSIE-DSGKL 658 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQE 103 L + + +++ F L R + G T D++ + Sbjct: 659 MVLLEKLIEVLGTGHKVVIFSQFVRFLKRARIMVEESFPELPIFELTGSTHDREAPVREF 718 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N + + + G+ L + + WW+ Q I+R+ + G Sbjct: 719 QNTDQTAAMLVSLKAASVGITLHT-ADYVFLLDPWWNPAVESQAIDRV-----HRIGQTN 772 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 VFVY L+AQ TI+E + + K + D ++N K Sbjct: 773 NVFVYRLLAQGTIEEKIHHLQKEKRDLFDSIVNDSKA 809 >gi|326317215|ref|YP_004234887.1| SNF2-like protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374051|gb|ADX46320.1| SNF2-related protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 947 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 28/217 (12%) Query: 2 KQYHKFQREL------YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + + +G +K Q+ + K Sbjct: 687 ELYEAVRTGADKQVRRVLERRGFEGGLITILDALLKLRQVCCDPRLVKGLPDAHGMESAK 746 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQE 103 + L ++ A ++V F L + + ++ Sbjct: 747 LDRLAELLPALVAEGRRVLVFSQFTGMLELAGQRLDALGLTWLALTGATAPRQRASVVRC 806 Query: 104 WNE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + G P+L A + G GLNL + +V WW+ + R + Sbjct: 807 FQDPSAEGSAPILLASLKAGGTGLNLTA-ADTVVHLDPWWNPAVME-----QASARAHRI 860 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VFV++L+A+ +I+E +L+ K + D +L Sbjct: 861 GQDKPVFVHHLVAEGSIEERMLELQARKQALADGVLG 897 >gi|296505669|ref|YP_003667369.1| SWF/SNF family helicase [Bacillus thuringiensis BMB171] gi|296326721|gb|ADH09649.1| SWF/SNF family helicase [Bacillus thuringiensis BMB171] Length = 918 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|163942929|ref|YP_001647813.1| non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] gi|163865126|gb|ABY46185.1| Non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] Length = 918 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + + K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNIVERSMKTKT 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWN 105 + +I K ++ + L+ + I+++ Sbjct: 755 VMELIENIKDQNESCLIFTQYIGMGNMLKSMLEETFGQRVLFLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|260906271|ref|ZP_05914593.1| putative helicase [Brevibacterium linens BL2] Length = 1041 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 66/213 (30%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y E+ ++ + K Q+ N + + K++ E Sbjct: 811 LYQSVVAEMMGRIEESSGIERRGLVLAAMTKLKQVCNHPAHLLHDGSAIGQRSGKLERFE 870 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEG 107 I+ + ++ F L + + ++++ E Sbjct: 871 EIMSETLAEGDRVLCFTQFTDFGEMLVPHLAAKFDTDVAYLAGSTSKQRRTQIVKDFQEP 930 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL N +V WW+ +E R + G KR V Sbjct: 931 DGPKIFVLSLKAGGTGLNLTA-ANQVVHLDRWWNPA-----VENQATDRAFRIGQKRRVQ 984 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V I T++E + L K + D+++ + Sbjct: 985 VRKFIGIGTLEERIDAILEEKKELADMVVGEGE 1017 >gi|49485834|ref|YP_043055.1| hypothetical protein SAS0928 [Staphylococcus aureus subsp. aureus MSSA476] gi|49244277|emb|CAG42704.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus MSSA476] Length = 455 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 114/200 (57%), Gaps = 8/200 (4%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAVY DE + + +HD+K+ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAVYTDE-EDVRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKK 200 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKA 446 >gi|302335213|ref|YP_003800420.1| SNF2-related protein [Olsenella uli DSM 7084] gi|301319053|gb|ADK67540.1| SNF2-related protein [Olsenella uli DSM 7084] Length = 1079 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 34/227 (14%) Query: 2 KQYHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y ++ L L + EA ++ ++ QL ++ E K+ Sbjct: 856 RLYQAHEQALRVSLSRQTDEAFGRGKIQVLAELMRLRQLCCDPRLLYDDY---EGGSAKL 912 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 + ++ ++ +++ F S L+ + + Sbjct: 913 ATVMDLVGSVVDSSHKMLLFSQFTSYLSLIASELDARGVRYYTITGATPKHRRLELADAF 972 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + P+ + G GLNL G +++V WW+ R + G R Sbjct: 973 NADETPVFLISLKAGGTGLNL-VGASVVVHADPWWNAAAQD-----QATDRAHRIGQTRD 1026 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL--------NALKKETI 203 V VY +IA++TI++ +L KS + + ++ +AL+KE + Sbjct: 1027 VSVYKVIAKDTIEDRILALQEVKSDLAEQVIGVGGGAGLSALRKEDL 1073 >gi|229094348|ref|ZP_04225422.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-42] gi|228689026|gb|EEL42851.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-42] Length = 855 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|229158809|ref|ZP_04286867.1| Helicase, SNF2/RAD54 [Bacillus cereus ATCC 4342] gi|228624793|gb|EEK81562.1| Helicase, SNF2/RAD54 [Bacillus cereus ATCC 4342] Length = 855 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|300785422|ref|YP_003765713.1| helicase [Amycolatopsis mediterranei U32] gi|299794936|gb|ADJ45311.1| putative helicase [Amycolatopsis mediterranei U32] Length = 1005 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 63/211 (29%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y E+ ++ + + K Q+ N + + K+ LE Sbjct: 775 LYCAIVDEMMKKIENSQGIKRRGHILAAITKLKQVCNHPAHLLHDGSPIGQRSGKVTRLE 834 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNEG 107 I+ + + ++ + L G ++ + G Sbjct: 835 EILAEILASGDRVLCFTQYTEFGHLLVPHLSDRLGAEVAFLHGGLAKGARDAIVERFQAG 894 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GL L ++ WW+ +E R + G +R V Sbjct: 895 DGPRILVLSLKAGGSGLTLTA-AGQVLHLDRWWNPA-----VENQATDRAFRIGQRRNVQ 948 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V + TI+E + + K + +++ Sbjct: 949 VRKFVCPGTIEERIDSLITRKRALAGMVVGE 979 >gi|315128428|gb|EFT84436.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus CGS03] gi|329729408|gb|EGG65813.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus 21189] Length = 452 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y +++ + +HD+K+ LE Sbjct: 254 KVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDDEDVRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARI 448 >gi|229099671|ref|ZP_04230598.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-29] gi|228683741|gb|EEL37692.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-29] Length = 855 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIVERSMKTKT 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 + +I K ++ + S L+ + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYISMGNMLKSILEETFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|196045190|ref|ZP_03112423.1| putative helicase [Bacillus cereus 03BB108] gi|229184042|ref|ZP_04311255.1| Helicase, SWF/SNF [Bacillus cereus BGSC 6E1] gi|196024192|gb|EDX62866.1| putative helicase [Bacillus cereus 03BB108] gi|228599425|gb|EEK57032.1| Helicase, SWF/SNF [Bacillus cereus BGSC 6E1] Length = 1064 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 23/214 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 A TI+E + + +K + ++ +++ + + Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEKLLSI 1053 >gi|118477275|ref|YP_894426.1| SWF/SNF family helicase [Bacillus thuringiensis str. Al Hakam] gi|118416500|gb|ABK84919.1| helicase, SWF/SNF family [Bacillus thuringiensis str. Al Hakam] Length = 1064 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 23/214 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 A TI+E + + +K + ++ +++ + + Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEKLLSI 1053 >gi|229178258|ref|ZP_04305628.1| Helicase, SWF/SNF [Bacillus cereus 172560W] gi|228605137|gb|EEK62588.1| Helicase, SWF/SNF [Bacillus cereus 172560W] Length = 1064 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 75/214 (35%), Gaps = 23/214 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPVQERVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 AQ TI+E + + +K + ++ +++ + Sbjct: 1020 AQGTIEEKMHELQESKKNLIAEVIEPGEEKLASI 1053 >gi|310640172|ref|YP_003944930.1| helicase, swf/snf [Paenibacillus polymyxa SC2] gi|309245122|gb|ADO54689.1| Helicase, SWF/SNF [Paenibacillus polymyxa SC2] Length = 1121 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 73/213 (34%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K Q E L E + + QL + E K Sbjct: 898 KLYTAYLAKLQHETLKHLNEEGFQKNRIKILAGLTRLRQLCCHPGLFIEGYT---GSSAK 954 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 + L II + + +++ F + L + Sbjct: 955 FEQLLEIITECLGSGKRMLIFSQFTTMLQMVGRELSREGVPYFYLDGQTPAPERVELCSR 1014 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ +E R + G K+ Sbjct: 1015 FNEGERELFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQATNRAHRMGQKK 1068 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+AQ T+++ + + + K + D ++ Sbjct: 1069 VVQVIRLVAQGTVEDKMYELQQKKKNLIDQVIQ 1101 >gi|326943035|gb|AEA18931.1| SWF/SNF family helicase [Bacillus thuringiensis serovar chinensis CT-43] Length = 918 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKI 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|253574567|ref|ZP_04851908.1| non-specific serine/threonine protein kinase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846272|gb|EES74279.1| non-specific serine/threonine protein kinase [Paenibacillus sp. oral taxon 786 str. D14] Length = 1053 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 79/218 (36%), Gaps = 25/218 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK---EVHDEKI 56 + Y EL + ++ A + Q+ + + K K+ Sbjct: 814 RLYQSVTAELLDQIGSQSGIARKGLVLSSLTRLKQICDHPELVVGSRPAKTAAFGRSGKM 873 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQE 103 + L +++ N ++ + LQ G + ++ Sbjct: 874 ERLGELLDMIMDNGEGALIFTQYVRMGELLQERLTERYGVRPFFLHGGVPKAERDQMVRA 933 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + EG+ P+ + G GLNL N +V + WW+ +E R + G + Sbjct: 934 FQEGEGSPIFVLSLKAGGVGLNLTR-ANHVVHYDRWWNPA-----VENQATDRVFRIGQQ 987 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V V+ LI Q T++E + + + K T+ + ++ + ++ Sbjct: 988 KNVEVHKLICQGTLEERIDELIERKKTLSEQVVGSGEQ 1025 >gi|228936530|ref|ZP_04099326.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823118|gb|EEM68954.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 855 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|15595996|ref|NP_249490.1| helicase [Pseudomonas aeruginosa PAO1] gi|218893257|ref|YP_002442126.1| putative helicase [Pseudomonas aeruginosa LESB58] gi|9946691|gb|AAG04188.1|AE004515_4 probable helicase [Pseudomonas aeruginosa PAO1] gi|218773485|emb|CAW29297.1| probable helicase [Pseudomonas aeruginosa LESB58] Length = 663 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 26/221 (11%) Query: 2 KQYHKFQ----RELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHW----KEV 51 + Y + R++ ++ G +K Q+ ++ + + Sbjct: 430 ELYETVRLALDRKVREEIARRGLARSRIVILEALLKLRQVCCDTRLLQRQEDGARSGRAL 489 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTI 101 K+ L ++++ A +++ F S LA ++ A Q + Sbjct: 490 SSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRRAPV 549 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q + GK+P+ + G GLNL + ++ + WW+ +E R + G Sbjct: 550 QRFQSGKVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQASDRAYRIGQ 603 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + K+ + D L + + Sbjct: 604 DKPVFVYRLIARGTVEEKIQHLQQEKAALADGLFSEGNGDG 644 >gi|51244847|ref|YP_064731.1| helicase [Desulfotalea psychrophila LSv54] gi|50875884|emb|CAG35724.1| probable helicase [Desulfotalea psychrophila LSv54] Length = 1399 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 24/209 (11%) Query: 4 YHKFQRELYCDLQGENIEA---FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ L+G ++ +K Q + K+K Sbjct: 1180 YEALRQNALDILEGNKDRKGRHLQILTEIMKLRQACCNPRL---IDKNTSISSSKMKVFG 1236 Query: 61 VIIEKANA--APIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEGK 108 ++E+ +V F L +++ + + + ++ GK Sbjct: 1237 DVVEELLGGNHKALVFSQFIGHLHIIREYLDERGISYQYLDGSTSSKMREKGVNDFQAGK 1296 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L + G GLNL + ++ WW+ IE R + G R V VY Sbjct: 1297 GDLFLISLKAGGLGLNLTA-ADYVLHMDPWWNPA-----IEDQASDRAHRIGQTRPVTVY 1350 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+++N+I+E +++ + K + LL Sbjct: 1351 RLVSKNSIEEKIVKLHQEKRDLAGSLLEG 1379 >gi|125974159|ref|YP_001038069.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] gi|125714384|gb|ABN52876.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] Length = 452 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 17/211 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K+Y + ++ Y +L + A N ++ ++ QL G + D+ ++V D K+KALE Sbjct: 233 LKKYKELVKQSYTELSAGEVTATNILTRLLRLSQLTGGFIGSDDGGKIEQVSDAKLKALE 292 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKI 109 I+E ++V F ++ + A G T D+ + + Sbjct: 293 DILESSIQEGHKLVVIARFIPEIHAICRLLEKKNIGYACIYGATKDRQEQVNRFQYDPDC 352 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G+ L + +VF+SL + + +Q RI + G K Y Sbjct: 353 MVFVGQIATAGLGITLTA-ASTMVFYSLDYSMSNFEQTKARI-----HRVGQKNGCTYIY 406 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LIA+ T+D +L LR K+ + +L++ +K Sbjct: 407 LIAKGTVDSKILTALRNKADLAKMLIDDYRK 437 >gi|308178507|ref|YP_003917913.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] gi|307745970|emb|CBT76942.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] Length = 1049 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 71/214 (33%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDL-QGENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y E+ + E IE + K Q+ N + K+ LE Sbjct: 819 LYQSVVGEMMDKIANSEGIERRGLVLAAMAKLKQVCNHPAQLLHDGSTVAGRSGKVARLE 878 Query: 61 VIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 ++E+ ++ + L G + K +Q + Sbjct: 879 ELLEQIVAEGDKVLCFTQYTEFAQMLLPHLASRLDAEVFYLHGGTSRAKRTELVQRFQAT 938 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + + G GLNL N ++ WW+ +E R + G KR V Sbjct: 939 DRPAIFLLSLKAGGTGLNLTA-ANHVLHLDRWWNPA-----VENQATDRAFRIGQKRNVQ 992 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V I + T++E + + ++ K + DL++ + Sbjct: 993 VRKFICRGTLEERIDEMIKDKQALADLVVGDGEG 1026 >gi|87300749|ref|ZP_01083591.1| SNF2 related domain:DEAD/DEAH box helicase:Helicase C-terminal [Synechococcus sp. WH 5701] gi|87284620|gb|EAQ76572.1| SNF2 related domain:DEAD/DEAH box helicase:Helicase C-terminal [Synechococcus sp. WH 5701] Length = 1037 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 69/220 (31%), Gaps = 26/220 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY---DEEKHWKEVHDEK 55 +K Y + + + + + K Q+ N E K Sbjct: 806 VKLYRRTVEDTLDAIARAPVGQKHGQVLGLLTKLKQVCNHPALMLKEGEVGAGFSARSAK 865 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQ 102 ++ LE I+E+ ++ F + + + + Sbjct: 866 LQRLEEIVEEVIAAGDRALLFTQFAEWGHLLQTHLQQRFHQEVPFLYGSTSKGERQAMVD 925 Query: 103 EWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + L + G GLNL + + WW+ +E R + G Sbjct: 926 RFQDDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDRAYRIG 979 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ I +++E + + +R K+ + + ++ + ++ Sbjct: 980 QTNRVMVHKFITSGSVEEKIDRMIREKARLAEDIVGSGEE 1019 >gi|229542960|ref|ZP_04432020.1| SNF2 helicase associated domain protein [Bacillus coagulans 36D1] gi|229327380|gb|EEN93055.1| SNF2 helicase associated domain protein [Bacillus coagulans 36D1] Length = 1081 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 72/206 (34%), Gaps = 23/206 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + E L + + + QL + E + K++ L + Sbjct: 865 DRIRHETAQTLAEGDFNRNRIKILAGLTRLRQLCCHPALFVENYRGE---SGKLEQLVEL 921 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP 110 N +++ F+S L ++ + +N G+ Sbjct: 922 AHTAIENGKRLLIFSQFSSMLQLIRTRLSDEGIDSFYLDGQTPSRERVEMADRFNSGEKN 981 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL G + +V + LWW+ +E R + G K V V L Sbjct: 982 VFLISLKAGGTGLNLT-GADTVVLYDLWWNPA-----VEEQAAGRAHRIGQKNVVQVIRL 1035 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 IA+ TI+E + + + K + + ++ Sbjct: 1036 IARGTIEEKIYELQQKKKELIEKVIQ 1061 >gi|229828003|ref|ZP_04454072.1| hypothetical protein GCWU000342_00052 [Shuttleworthia satelles DSM 14600] gi|229792597|gb|EEP28711.1| hypothetical protein GCWU000342_00052 [Shuttleworthia satelles DSM 14600] Length = 1314 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 77/212 (36%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENI----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + + G ++ K Q+ + E K K Sbjct: 1094 RLYDAQVARMRAMIAGAGEAYNRNKIQVLAELTKIRQICCDPSIFVEGYR---GKSAKRK 1150 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN 105 A +I ++V F S LA L++ + + + + +N Sbjct: 1151 ACLDLIGSAIDGGHKMLVFSQFTSMLALLEEDLSRAKIPFYKITGATGKEERLRLVHAFN 1210 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + P+ + G GLNL G ++++ + WW+L R + G + V Sbjct: 1211 DDETPVFLISLKAGGTGLNLT-GADLVIHYDPWWNLAAQ-----NQATDRAHRIGQTKDV 1264 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LIA+ TI++ +L+ K + D +L+ Sbjct: 1265 SVFRLIAKGTIEDRILEMQEKKKDLADAILSG 1296 >gi|229118736|ref|ZP_04248087.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock1-3] gi|228664704|gb|EEL20195.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock1-3] Length = 855 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIVERSMKTKT 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 + +I K ++ + S L+ + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYISMGNMLKSILEETFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|229187464|ref|ZP_04314606.1| Helicase, SNF2/RAD54 [Bacillus cereus BGSC 6E1] gi|228595985|gb|EEK53663.1| Helicase, SNF2/RAD54 [Bacillus cereus BGSC 6E1] Length = 855 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 692 LMELIENIKNQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|23100530|ref|NP_693997.1| helicase [Oceanobacillus iheyensis HTE831] gi|22778763|dbj|BAC15031.1| helicase (swi/snf family) [Oceanobacillus iheyensis HTE831] Length = 1056 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 23/206 (11%) Query: 5 HKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q+E + + + Q+ + E E K++ L Sbjct: 840 RQVQQEAVQSFKENGFQQNRMKILAGLTRLRQICCHPSMFIENY---EGASGKLEQLMET 896 Query: 63 IEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKIP 110 I+ N +++ F S + + + + +N G+ Sbjct: 897 IKTALDNGKRMLIFSQFTSMHEIIQERLKKEGYGYFYLHGQTSSKERVEMSERFNHGEND 956 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL G + ++ F LWW+ +E R + G K+ V V L Sbjct: 957 IFLISLKAGGTGLNLT-GADTVILFDLWWNPA-----VEDQATGRAHRFGQKKVVQVIRL 1010 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 + + TI+E + + K + D ++ Sbjct: 1011 VTEGTIEEKIYDLQQRKRELIDQVIQ 1036 >gi|258427143|ref|ZP_05688065.1| SNF2 family protein [Staphylococcus aureus A9299] gi|257849921|gb|EEV73880.1| SNF2 family protein [Staphylococcus aureus A9299] Length = 455 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y +++ + +HD+K+ LE Sbjct: 257 KVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDDEDVRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARI 451 >gi|229124753|ref|ZP_04253933.1| Helicase, SNF2/RAD54 [Bacillus cereus 95/8201] gi|228658730|gb|EEL14390.1| Helicase, SNF2/RAD54 [Bacillus cereus 95/8201] Length = 855 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|116048717|ref|YP_792483.1| helicase [Pseudomonas aeruginosa UCBPP-PA14] gi|115583938|gb|ABJ09953.1| probable helicase [Pseudomonas aeruginosa UCBPP-PA14] Length = 663 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 26/221 (11%) Query: 2 KQYHKFQ----RELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHW----KEV 51 + Y + R++ ++ G +K Q+ ++ + + Sbjct: 430 ELYETVRLALDRKVREEIARRGLARSRIVILEALLKLRQVCCDTRLLQRQEDGARSGRAL 489 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTI 101 K+ L ++++ A +++ F S LA ++ A Q + Sbjct: 490 SSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRRAPV 549 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q + GK+P+ + G GLNL + ++ + WW+ +E R + G Sbjct: 550 QRFQSGKVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQASDRAYRIGQ 603 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + K+ + D L + + Sbjct: 604 DKPVFVYRLIARGTVEEKIQHLQQEKAALADGLFSEGNGDG 644 >gi|66395664|ref|YP_240070.1| ORF008 [Staphylococcus phage 47] gi|88195255|ref|YP_500058.1| SNF2 family protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|258445562|ref|ZP_05693744.1| phage helicase [Staphylococcus aureus A6300] gi|258455568|ref|ZP_05703525.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|297207823|ref|ZP_06924257.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|62636088|gb|AAX91199.1| ORF008 [Staphylococcus phage 47] gi|87202813|gb|ABD30623.1| SNF2 family N-terminal domain protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|257855609|gb|EEV78542.1| phage helicase [Staphylococcus aureus A6300] gi|257862256|gb|EEV85027.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|296887539|gb|EFH26438.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus ATCC 51811] Length = 455 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y +++ + +HD+K+ LE Sbjct: 257 KVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDDEDVRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARI 451 >gi|229032866|ref|ZP_04188821.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1271] gi|228728411|gb|EEL79432.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1271] Length = 855 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 73/210 (34%), Gaps = 23/210 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ LI T++E + + L K ++ + ++ Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVI 835 >gi|254245052|ref|ZP_04938374.1| hypothetical protein PA2G_05937 [Pseudomonas aeruginosa 2192] gi|126198430|gb|EAZ62493.1| hypothetical protein PA2G_05937 [Pseudomonas aeruginosa 2192] Length = 663 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 84/221 (38%), Gaps = 26/221 (11%) Query: 2 KQYHKFQ----RELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHW----KEV 51 + Y + R++ ++ G +K Q+ ++ + + Sbjct: 430 ELYETVRLALDRKVREEIARRGLARSRIVILEALLKLRQVCCDTRLLQRQEDGARSGRAL 489 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTI 101 K+ L ++++ A +++ F S LA ++ A Q + Sbjct: 490 SSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLALIEDALRQRGVDYVLLTGETRDRRAPV 549 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q + GK+P+ + G GLNL + ++ + WW+ +E R + G Sbjct: 550 QRFQSGKVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQASDRAYRIGQ 603 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + K+ + D L + + Sbjct: 604 DKPVFVYRLIARGTVEEKIQHLQQEKAALADGLFSEGNGDG 644 >gi|146282998|ref|YP_001173151.1| helicase/SNF2 domain-containing protein [Pseudomonas stutzeri A1501] gi|145571203|gb|ABP80309.1| helicase/SNF2 family domain protein [Pseudomonas stutzeri A1501] Length = 773 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 80/212 (37%), Gaps = 24/212 (11%) Query: 4 YHKFQ----RELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEK--HWKEVHDEK 55 Y + R++ +++ + + +K Q+ + + K Sbjct: 547 YETLRLAMDRKVREEIERKGLARSQMVILEALLKLRQVCCDLRLLKGDAVATSRGSSSGK 606 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWN 105 + +L ++++ + +++ F S LA +++ D ++ + Sbjct: 607 LDSLLDMLDELMSEGRRVLLFSQFTSMLALIEQALLKRGITYVKLTGETDDRRTPVERFQ 666 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G++PL + G GLNL + ++ + WW+ E R + G + V Sbjct: 667 AGEVPLFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPV 720 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 FVY LI + T++E + + K+ + +L Sbjct: 721 FVYRLITRGTVEERIRELQARKAELAAGVLEG 752 >gi|228917853|ref|ZP_04081390.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228841789|gb|EEM86899.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 855 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|33239499|ref|NP_874441.1| SNF2 family DNA/RNA helicase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237024|gb|AAP99093.1| Superfamily II DNA/RNA helicases, SNF2 family [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 1062 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKE---VHDEKIK 57 Y + + +L I + Q+ N +E ++ + K++ Sbjct: 829 LYKQTVEKSLDELASLPIGQRQGKTLGLLTRLKQICNHPAIALKETQVEKNFLLRSSKLQ 888 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEW 104 LE I+++ + ++ F G K I + Sbjct: 889 RLEEILQEVKESHDRALLFTQFAEWGHLLQAYLQTKWESEVPFLHGGTPKGKRQEMIDRF 948 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + G GLNL N + WW+ +E R + G K Sbjct: 949 QDDPRGPNIFLLSLKAGGVGLNLTR-ANHVFHIDRWWNPA-----VENQATDRAYRIGQK 1002 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++V V+ I TI+E + Q + K+ + + ++ + + Sbjct: 1003 KSVIVHKFITTGTIEEKINQMILEKTELAENIVGSGE 1039 >gi|229076456|ref|ZP_04209418.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock4-18] gi|228706642|gb|EEL58853.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock4-18] Length = 855 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIVERSMKTKT 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 + +I K ++ + S L+ + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYISMGNMLKSILEETFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|260221226|emb|CBA29577.1| hypothetical protein Csp_A12850 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 784 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 18/186 (9%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 + +K Q+ ++ K+ AL ++ ++V F Sbjct: 557 ISILDALLKLRQVCCDPYLVKGSDIAPDMERAKLHALTDLLVPLVDEGRRVLVFSQFTEL 616 Query: 81 LARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 L + + + +Q + ++P+L + G GLNL + Sbjct: 617 LELIADALSALRLPFLSLTGNTCPAQRGDIVQRFQNQEVPVLLVSLKTGGVGLNLTA-AD 675 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ WW+ +E R + G + VFVY L+ + +I+E +L+ K + Sbjct: 676 TVIHMDPWWNPA-----VEEQATARAHRIGQDQPVFVYKLVVEGSIEERMLELQARKLAL 730 Query: 191 QDLLLN 196 D +L Sbjct: 731 SDSVLG 736 >gi|229105848|ref|ZP_04236475.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-28] gi|228677569|gb|EEL31819.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-28] Length = 855 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIVERSMKTKT 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 + +I K ++ + S L+ + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYISMGNMLKSILEETFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|218960404|ref|YP_001740179.1| hypothetical protein CLOAM0057 [Candidatus Cloacamonas acidaminovorans] gi|167729061|emb|CAO79972.1| hypothetical protein CLOAM0057 [Candidatus Cloacamonas acidaminovorans] Length = 1065 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 77/210 (36%), Gaps = 20/210 (9%) Query: 2 KQYHK---FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + + E + + K Q+ N + + + K++ Sbjct: 841 KLYLQILDMVHKKLLPEGKEMPSYIHILAALTKLRQVCNHPHLANGDILPELEASSKLEQ 900 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEG 107 L ++ + +++ F L+ ++ + G+T D+ Sbjct: 901 LLELVTEATNAGHKVLIFSQFVQMLSIIRKVLEANSLPYCYLDGQTKDRVTPIKSFETNP 960 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +I L + G GLNL + ++ + WW+ M+E + R + G V V Sbjct: 961 EIKLFLISLKAGGTGLNLTA-ADTVILYDPWWNP-----MVENQAIDRTHRIGQTHKVQV 1014 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + LI + T++E +LQ + K + + ++ Sbjct: 1015 FRLITKGTVEEKILQLQQNKRELFETVIEG 1044 >gi|152986052|ref|YP_001350061.1| helicase [Pseudomonas aeruginosa PA7] gi|150961210|gb|ABR83235.1| probable helicase [Pseudomonas aeruginosa PA7] Length = 773 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 82/221 (37%), Gaps = 26/221 (11%) Query: 2 KQYHKFQ----RELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---- 51 + Y + R++ ++ G +K Q+ ++ Sbjct: 540 ELYETVRLALDRKVREEIARRGLARSRIVILEALLKLRQVCCDTRLLQRQEDSARGGRAA 599 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTI 101 K+ L ++++ A +++ F S LA ++ A Q + Sbjct: 600 SSGKLAYLLDMLDELIAEGRRVLLFSQFTSMLALVEDALRQRGVDYVLLTGETRDRRAPV 659 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q + G++P+ + G GLNL + ++ + WW+ +E R + G Sbjct: 660 QRFQGGQVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQASDRAYRIGQ 713 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFVY LIA+ T++E + + K+ + D L + + Sbjct: 714 DKPVFVYRLIARGTVEEKIQHLQQEKAALADGLFSEGNGDG 754 >gi|152975221|ref|YP_001374738.1| non-specific serine/threonine protein kinase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023973|gb|ABS21743.1| Non-specific serine/threonine protein kinase [Bacillus cytotoxicus NVH 391-98] Length = 1066 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 23/214 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 851 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 907 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 908 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 967 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 968 FLISLKAGGTGLNLT-GADTVILYDLWWNPSVEQ-----QAADRAYRMGQKNTVQVIKLV 1021 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 A+ TI+E + + +K + ++ +++ + Sbjct: 1022 ARGTIEEKIHELQESKKNLIAEVIEPGEEKLFSI 1055 >gi|228930248|ref|ZP_04093256.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228829389|gb|EEM75018.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 855 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|229141981|ref|ZP_04270506.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST26] gi|228641270|gb|EEK97576.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST26] Length = 855 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEKHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|149279882|ref|ZP_01886009.1| superfamily II DNA/RNA helicase, SNF2 family protein [Pedobacter sp. BAL39] gi|149229472|gb|EDM34864.1| superfamily II DNA/RNA helicase, SNF2 family protein [Pedobacter sp. BAL39] Length = 1139 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 73/208 (35%), Gaps = 20/208 (9%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++RE+ L + + N +K Q+ N +++++ + Sbjct: 913 KVYDAYEREIRDYLTNQTDAEIASDTMNVLKGIMKLRQICNSPSLLSDDEYYGASSAKME 972 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLA--------RLQKAFPQGRTLDKDPCTIQEWNEGK 108 LE I+ K+ I+V F L R + + + + Sbjct: 973 VLLEQILSKSPQHKILVFSQFVGMLNLIRAELEKRQVSFAMLTGQTRNRQAVVDRFQDDE 1032 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I + + G GLNL + + WW+ +E + R + G + V Sbjct: 1033 SIRVFLISLKAGGVGLNLTQ-ADYVYIVDPWWNPA-----VENQAIDRTYRIGQHKNVVA 1086 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 LI +T++E +++ K + L+ Sbjct: 1087 VRLICPDTVEEKIMEMQEHKRDLVTDLV 1114 >gi|325000735|ref|ZP_08121847.1| putative ATP-dependent helicase [Pseudonocardia sp. P1] Length = 571 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 71/214 (33%), Gaps = 27/214 (12%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKE-----VHDEK 55 Y ++ ++G + N + K Q+ N + K Sbjct: 329 LYRTVVDDMMEKIEGSDGIERRGNVLAAMSKLKQVCNHPAQLLHDGSPIHRAGGAHRSGK 388 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQ 102 + LE I+E +++ + A L+ G + + Sbjct: 389 VARLEEILESVLAAGDKVLLFTQYTEFAAMLRPHLSARFDTEVLYLHGGTPKKRRDEMVA 448 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +G + + G GL L N ++ WW+ +E R + G Sbjct: 449 RFQGDGGPSVFLLSLKAGGTGLTLTA-ANHVIHLDRWWNPA-----VEDQATDRAFRIGQ 502 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR+V V + T++E + + +K ++ DL++ Sbjct: 503 KRSVQVRKFVCPGTVEERIDTLVASKRSLSDLVV 536 >gi|229020462|ref|ZP_04177215.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1273] gi|229026691|ref|ZP_04183032.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1272] gi|228734643|gb|EEL85296.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1272] gi|228740838|gb|EEL91083.1| Helicase, SNF2/RAD54 [Bacillus cereus AH1273] Length = 855 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 77/212 (36%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ +++ K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQDIIERSMKTKT 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWN 105 + +I K ++ + L++ + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYIGMGNMLKRMLEEKFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|229164183|ref|ZP_04292118.1| Helicase, SNF2/RAD54 [Bacillus cereus R309803] gi|228619300|gb|EEK76191.1| Helicase, SNF2/RAD54 [Bacillus cereus R309803] Length = 840 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 617 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 676 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ + I+++ Sbjct: 677 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEENFGQRVLFLNGSVPKKERDKMIEQFQ 736 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 737 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 790 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 791 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 822 >gi|163798351|ref|ZP_02192275.1| swf/snf family helicase [alpha proteobacterium BAL199] gi|159176371|gb|EDP60962.1| swf/snf family helicase [alpha proteobacterium BAL199] Length = 1048 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 25/212 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + A ++ + + D++ V K+ A Sbjct: 830 YEALRRQSLDRLAAVDAPAGQRKIQILAEITRLRRACCNPALIDQDA---GVPSGKLAAF 886 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 +++ N +V F + LA + + + G Sbjct: 887 LDLVDDLVRNRHRALVFSQFVAHLALVRAALDARGIRYEYLDGSTPAADRERRVAAFQAG 946 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + +V WW+ +E R + G +R V + Sbjct: 947 TADVFLISLRAGGTGLNLTA-ADYVVHLDPWWNPA-----VEDQASDRAHRIGQERPVTI 1000 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y LI Q++I+E +L+ R K + +L + Sbjct: 1001 YRLIMQDSIEEQILRLHRDKRDLAADILEGGE 1032 >gi|228948966|ref|ZP_04111239.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810722|gb|EEM57070.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 855 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKNVLEEHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|229199361|ref|ZP_04326026.1| Helicase, SNF2/RAD54 [Bacillus cereus m1293] gi|228584075|gb|EEK42228.1| Helicase, SNF2/RAD54 [Bacillus cereus m1293] Length = 855 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E K++ K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKETEPKDIIERSMKTST 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L+ + I+++ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKDVLEKHFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|327481349|gb|AEA84659.1| helicase/SNF2 domain-containing protein [Pseudomonas stutzeri DSM 4166] Length = 773 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 80/212 (37%), Gaps = 24/212 (11%) Query: 4 YHKFQ----RELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEK--HWKEVHDEK 55 Y + R++ +++ + + +K Q+ + + K Sbjct: 547 YETLRLAMDRKVRDEIERKGLARSQMVILEALLKLRQVCCDLRLLKGDAVATSRGSSSGK 606 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWN 105 + +L ++++ + +++ F S LA +++ D ++ + Sbjct: 607 LDSLLDMLDELMSEGRRVLLFSQFTSMLALIEQALLKRGITYVKLTGETDDRRTPVERFQ 666 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G++PL + G GLNL + ++ + WW+ E R + G + V Sbjct: 667 AGEVPLFLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPV 720 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 FVY LI + T++E + + K+ + +L Sbjct: 721 FVYRLITRGTVEERIRELQARKAELAAGVLEG 752 >gi|310823284|ref|YP_003955642.1| snf2/helicase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309396356|gb|ADO73815.1| SNF2/helicase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1081 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 69/211 (32%), Gaps = 23/211 (10%) Query: 3 QYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + E + + + ++ Q+ + K+ Sbjct: 856 LYREVLEESRRKVSESIEKVGFKRSRVSILAALMRLRQVCCDPRLLKLPPNTLLPSSAKL 915 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWN 105 + +++ A +V F L L+ + GRT D+ Sbjct: 916 ERFGQLVDDLVAEGHRALVFSQFTEMLELLKTEADKRGLNYLYLDGRTKDRMAKVDDFNR 975 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 PL F + G GLNL + ++ + WW+ +E R + G RAV Sbjct: 976 PEGPPLFFISLKAGGTGLNLTA-ADYVIHYDPWWNPA-----VEDQATDRTHRIGQTRAV 1029 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + +L Sbjct: 1030 ISYKLITRGTVEEKILSLQRRKKELAAGVLG 1060 >gi|115378604|ref|ZP_01465757.1| Snf2 family protein [Stigmatella aurantiaca DW4/3-1] gi|115364391|gb|EAU63473.1| Snf2 family protein [Stigmatella aurantiaca DW4/3-1] Length = 1130 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 69/211 (32%), Gaps = 23/211 (10%) Query: 3 QYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + E + + + ++ Q+ + K+ Sbjct: 905 LYREVLEESRRKVSESIEKVGFKRSRVSILAALMRLRQVCCDPRLLKLPPNTLLPSSAKL 964 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWN 105 + +++ A +V F L L+ + GRT D+ Sbjct: 965 ERFGQLVDDLVAEGHRALVFSQFTEMLELLKTEADKRGLNYLYLDGRTKDRMAKVDDFNR 1024 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 PL F + G GLNL + ++ + WW+ +E R + G RAV Sbjct: 1025 PEGPPLFFISLKAGGTGLNLTA-ADYVIHYDPWWNPA-----VEDQATDRTHRIGQTRAV 1078 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI + T++E +L R K + +L Sbjct: 1079 ISYKLITRGTVEEKILSLQRRKKELAAGVLG 1109 >gi|282898570|ref|ZP_06306558.1| SNF2-related helicase [Cylindrospermopsis raciborskii CS-505] gi|281196438|gb|EFA71347.1| SNF2-related helicase [Cylindrospermopsis raciborskii CS-505] Length = 1427 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + + ++ ++ + + K++ L Sbjct: 1208 YEALRRQAISKLNESDADPGKKHLQVLAEIMRLRRACCNPSLVMPNTD---LSSSKLQLL 1264 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEG 107 ++ + N +V F L + + + ++ + G Sbjct: 1265 GEVLAELLENHHKALVFSQFVDHLHIIRNYLESKSIKYQYLDGSTPMAERKRSVDSFQAG 1324 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + ++ WW+ +E R + G +R V + Sbjct: 1325 DGDIFLISLKAGGTGLNLTA-ADYVIHTDPWWNPA-----VEDQASDRAHRIGQQRPVTI 1378 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI++ +++ K + D LL Sbjct: 1379 YRLVAKDTIEDKIVELHHHKRDLADTLLEG 1408 >gi|229017133|ref|ZP_04174048.1| Helicase, SWF/SNF [Bacillus cereus AH1273] gi|229023310|ref|ZP_04179819.1| Helicase, SWF/SNF [Bacillus cereus AH1272] gi|228738015|gb|EEL88502.1| Helicase, SWF/SNF [Bacillus cereus AH1272] gi|228744153|gb|EEL94240.1| Helicase, SWF/SNF [Bacillus cereus AH1273] Length = 1064 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 71/210 (33%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRVLAGLTRLRQICCHPALFVDDYK---GSSAKFDQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGSTPAQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ K++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEIIEPGKEK 1049 >gi|70729334|ref|YP_259071.1| helicase/SNF2 domain-containing protein [Pseudomonas fluorescens Pf-5] gi|68343633|gb|AAY91239.1| helicase/SNF2 family domain protein [Pseudomonas fluorescens Pf-5] Length = 875 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 77/214 (35%), Gaps = 22/214 (10%) Query: 3 QYHKFQ----RELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + +++ ++ + + +K Q+ ++ + K+ Sbjct: 644 VYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDSPPTRGSSSGKL 703 Query: 57 K--ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNE 106 + I++ F S L+ ++ + ++++ Sbjct: 704 DSLMEMLEELFEEGRRILLFSQFTSMLSLIEAELKRRNIAYALLTGQTRDRRTPVRDFQS 763 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK+ + + G GLNL + ++ + WW+ E R + G ++ VF Sbjct: 764 GKLQIFLISLKAGGVGLNLTE-ADTVIHYDPWWNPAT-----ESQATDRAYRIGQEKPVF 817 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 VY LIA+ T++E + + KS + +L+ K Sbjct: 818 VYKLIARGTVEEKIQHLQQEKSDLAAGVLDGRKA 851 >gi|291436286|ref|ZP_06575676.1| SNF2/RAD54 family helicase [Streptomyces ghanaensis ATCC 14672] gi|291339181|gb|EFE66137.1| SNF2/RAD54 family helicase [Streptomyces ghanaensis ATCC 14672] Length = 692 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 76/217 (35%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HDE 54 Y RE ++ Q+ + Y +E+H + Sbjct: 461 LYEAVVRESLLAIESAQGMGRRGLVLKLLTSLKQICDHPALYLKEEHARAGGGRLAARSG 520 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 K+ L+ +++ +V + + G + + + Sbjct: 521 KLALLDELLDTLLAEDGSALVFTQYVGMARLITAHLAERAVPVDLLHGGTPVPERERMVD 580 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G P+L + G GLNL G+ +V F WW+ +E R + G Sbjct: 581 RFQSGATPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEEQATDRAYRIGQT 634 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V V+ LI + T+++ + + L++K + D +L + + Sbjct: 635 QPVQVHRLITEGTVEDRIAEMLQSKRALADAILGSGE 671 >gi|229169956|ref|ZP_04297649.1| Helicase, SNF2/RAD54 [Bacillus cereus AH621] gi|228613474|gb|EEK70606.1| Helicase, SNF2/RAD54 [Bacillus cereus AH621] Length = 855 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + + K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNIVERSMKTKT 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWN 105 + +I K ++ + L+ + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYIGMGNMLKSMLEETFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|239927952|ref|ZP_04684905.1| helicase [Streptomyces ghanaensis ATCC 14672] Length = 701 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 76/217 (35%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HDE 54 Y RE ++ Q+ + Y +E+H + Sbjct: 470 LYEAVVRESLLAIESAQGMGRRGLVLKLLTSLKQICDHPALYLKEEHARAGGGRLAARSG 529 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 K+ L+ +++ +V + + G + + + Sbjct: 530 KLALLDELLDTLLAEDGSALVFTQYVGMARLITAHLAERAVPVDLLHGGTPVPERERMVD 589 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G P+L + G GLNL G+ +V F WW+ +E R + G Sbjct: 590 RFQSGATPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEEQATDRAYRIGQT 643 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V V+ LI + T+++ + + L++K + D +L + + Sbjct: 644 QPVQVHRLITEGTVEDRIAEMLQSKRALADAILGSGE 680 >gi|228964841|ref|ZP_04125946.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar sotto str. T04001] gi|228794779|gb|EEM42280.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar sotto str. T04001] Length = 1064 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 73/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 AQ TI+E + + +K + ++ +++ Sbjct: 1020 AQGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|229069404|ref|ZP_04202693.1| Helicase, SWF/SNF [Bacillus cereus F65185] gi|228713543|gb|EEL65429.1| Helicase, SWF/SNF [Bacillus cereus F65185] Length = 1064 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 AQ TI+E + + +K + ++ + + Sbjct: 1020 AQGTIEEKMHELQESKKNLIAEVIEPGEGK 1049 >gi|308275178|emb|CBX31775.1| hypothetical protein N47_N26000 [uncultured Desulfobacterium sp.] Length = 889 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 76/223 (34%), Gaps = 33/223 (14%) Query: 1 MKQYHKFQRELYC-------DLQGENIEAFN------SASKTVKCLQLANGAVYYDEEKH 47 MK Y R+ +L+ +E S +K QL N Y+ Sbjct: 650 MKTYSDLSRKQVLLYNKVVEELKRAIVETEGIQRKGLVLSSIIKFKQLCNHPDQYNGTTE 709 Query: 48 WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTL 94 ++E K L I ++V F R G + Sbjct: 710 YEEKDSGKFARLREICETIYEKREKVLVFTQFKEMTEPLSVFLESIFFRKGLILHGGVPV 769 Query: 95 DKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++E+ IP + + G GLNL N ++ F WW+ +E Sbjct: 770 SRRKKIVEEFQSQSYIPFMVLSLKAGGVGLNLTE-ANHVIHFDRWWNPA-----VEDQAT 823 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V V+ I + T++E + L K + + +++ Sbjct: 824 DRAFRIGQKKNVIVHKFITKGTVEEKIDNMLEEKKKLSNDVIS 866 >gi|196041238|ref|ZP_03108533.1| putative helicase [Bacillus cereus NVH0597-99] gi|196027946|gb|EDX66558.1| putative helicase [Bacillus cereus NVH0597-99] Length = 1064 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMYELQESKKNLIAEVIEPGEEK 1049 >gi|114777053|ref|ZP_01452073.1| Superfamily II DNA/RNA helicase, SNF2 family protein [Mariprofundus ferrooxydans PV-1] gi|114552574|gb|EAU55034.1| Superfamily II DNA/RNA helicase, SNF2 family protein [Mariprofundus ferrooxydans PV-1] Length = 1095 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 23/209 (11%) Query: 2 KQYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y Q+ + + + +K Q+ + K Sbjct: 870 ELYESVRLAMQKRVRDAVASMGVAQSQIVVLDALMKMRQVCCDPRLVSGLQGALPA-SAK 928 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWN 105 + L ++ + +++ F S L ++ ++ + Sbjct: 929 LTMLMEMLPEMIEEGRRVLLFSQFTSMLKLIEAEVTAAGIDYVKLTGQTRDRETPVERFQ 988 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G++PL + G GLNL + ++ + WW+ +E R + G +AV Sbjct: 989 NGEVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VEAQATDRAHRIGQDKAV 1042 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 FVY L+ + T++E +L+ K + D + Sbjct: 1043 FVYKLLTEGTVEERILEMQDRKRELADSI 1071 >gi|325113188|ref|YP_004277134.1| putative helicase [Acidiphilium multivorum AIU301] gi|325052655|dbj|BAJ82992.1| putative helicase [Acidiphilium multivorum AIU301] Length = 918 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 74/214 (34%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + +L L+ A V+ Q+ N ++ + +W E K + L Sbjct: 686 LYSEAVGDLARSLEEAEGMARRGLVLASLVRLKQICNHPAHWLNDGNWDEAGSGKFRRLR 745 Query: 61 VIIEKAN--AAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 I E ++V F R G + + +Q + + Sbjct: 746 EIAEAVAARQDKMLVFTQFREMVAPLAALLASVFGRDGLELHGGTPVRQRRTLVQRFQED 805 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++P + G GL L + +V F WW+ +E R + G K V Sbjct: 806 EEVPFFVLSLKAGGTGLTLTA-ASHVVHFDRWWNPA-----VEAQATDRAFRIGQKSNVL 859 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ I + T++E + + K ++ LL+ + Sbjct: 860 VHKFICRGTVEERIDAMIEAKQSLSTELLSGENE 893 >gi|119489573|ref|ZP_01622333.1| SNF2-related helicase [Lyngbya sp. PCC 8106] gi|119454485|gb|EAW35633.1| SNF2-related helicase [Lyngbya sp. PCC 8106] Length = 1061 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 72/225 (32%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYD-----------EEKHWK 49 Y K + D+ + VK Q+ N + + E + Sbjct: 816 LYQKIVDQSLADIDSAAGIQRRGMILALLVKLKQVCNHPILLNGKATKTGKKKVETQGLS 875 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDK 96 K++ + ++E+ + IV F L R +K Sbjct: 876 LQSSGKLQRFKEMLEELLSEGDRAIVFTQFAEWGKVLQPYLEQQLNREVLFLYGATRKNK 935 Query: 97 DPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I + + P+ + G GLNL N + F WW+ +E Sbjct: 936 REEMIDRFQQDPQGPPIFILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATD 989 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G R V V+ + T++E + + +K + + ++ + + Sbjct: 990 RVFRIGQTRNVQVHKFVCTGTLEEKIHDLIESKKVLAEQVVGSGE 1034 >gi|88857070|ref|ZP_01131713.1| helicase [Pseudoalteromonas tunicata D2] gi|88820267|gb|EAR30079.1| helicase [Pseudoalteromonas tunicata D2] Length = 1402 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 69/210 (32%), Gaps = 27/210 (12%) Query: 4 YHKFQRELYCDLQGEN------IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y ++ L + + ++ K Q + + K+ Sbjct: 1180 YEALRQTAITKLTEASNHSNAAEQRIRMLAELTKLRQACCHPALIMPDTT---LTSSKLA 1236 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN 105 AL ++ + N ++ F L + + + + Sbjct: 1237 ALNTLLIELQQNNHKALIFSQFVGHLALIKQHLDAQDISYQYLDGSTPTKERQQRVNAFQ 1296 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL + ++ WW+ +E R + G +R V Sbjct: 1297 RGEGDVFLISLKAGGSGLNLTA-ADYVIHMDPWWNPA-----VEEQASDRAHRMGQQRPV 1350 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY LIA+ TI+E ++ + K + D LL Sbjct: 1351 TVYRLIAKGTIEEQIVAMHQHKRDLADTLL 1380 >gi|229063904|ref|ZP_04200205.1| Helicase, SNF2/RAD54 [Bacillus cereus AH603] gi|229136057|ref|ZP_04264813.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST196] gi|228647378|gb|EEL03457.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST196] gi|228716374|gb|EEL68082.1| Helicase, SNF2/RAD54 [Bacillus cereus AH603] Length = 855 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + + K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNIVERSMKTKT 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWN 105 + +I K ++ + L+ + I+++ Sbjct: 692 VMELIENIKDQNESCLIFTQYIGMGNMLKSMLEETFGQRVLFLNGSVPKKERDKMIEQFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|163795414|ref|ZP_02189381.1| swf/snf family helicase [alpha proteobacterium BAL199] gi|159179400|gb|EDP63931.1| swf/snf family helicase [alpha proteobacterium BAL199] Length = 1385 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 25/212 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + A ++ + + D++ V K+ A Sbjct: 1167 YEALRRQSLDRLAAVDAPAGQRKIQILAEITRLRRACCNPALIDQDA---GVPSGKLAAF 1223 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 +++ N +V F + LA + + + G Sbjct: 1224 LDLVDDLVRNRHRALVFSQFVAHLALVRAALDARGIRYEYLDGSTPAADRERRVAAFQAG 1283 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + +V WW+ +E R + G +R V + Sbjct: 1284 TADVFLISLRAGGTGLNLTA-ADYVVHLDPWWNPA-----VEDQASDRVHRIGQERPVTI 1337 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y LI Q++I+E +L+ R K + +L + Sbjct: 1338 YRLIMQDSIEEQILRLHRDKRDLAADILEGGE 1369 >gi|163796791|ref|ZP_02190749.1| swf/snf family helicase [alpha proteobacterium BAL199] gi|159178045|gb|EDP62592.1| swf/snf family helicase [alpha proteobacterium BAL199] Length = 1385 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 25/212 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + A ++ + + D++ V K+ A Sbjct: 1167 YEALRRQSLDRLAAVDAPAGQRKIQILAEITRLRRACCNPALIDQDA---GVPSGKLAAF 1223 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 +++ N +V F + LA + + + G Sbjct: 1224 LDLVDDLVRNRHRALVFSQFVAHLALVRAALDARGIRYEYLDGSTPAADRERRVAAFQAG 1283 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + +V WW+ +E R + G +R V + Sbjct: 1284 TADVFLISLRAGGTGLNLTA-ADYVVHLDPWWNPA-----VEDQASDRVHRIGQERPVTI 1337 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y LI Q++I+E +L+ R K + +L + Sbjct: 1338 YRLIMQDSIEEQILRLHRDKRDLAADILEGGE 1369 >gi|290956330|ref|YP_003487512.1| helicase [Streptomyces scabiei 87.22] gi|260645856|emb|CBG68947.1| putative helicase [Streptomyces scabiei 87.22] Length = 968 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 75/223 (33%), Gaps = 26/223 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEE------KHWKEVHDE 54 Y RE ++ + A Q+ + Y +E Sbjct: 737 LYEAVVRESLLAIETADGMARRGLVLKLLGALKQICDHPALYLKEEPATATGERFVGRSG 796 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 K+ L+ +++ +V + + G + + + Sbjct: 797 KLALLDELLDTLLSEDGSALVFTQYVGMARLITAHLAARAVPVELLHGGTPVTEREHMVD 856 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G P+L + G GLNL G+ +V F WW+ +E R + G Sbjct: 857 RFQSGATPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEEQATDRAYRIGQT 910 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V V+ LI + T+++ + + L +K + D +L + + + Sbjct: 911 QPVQVHRLITEGTVEDRIAEMLESKRALSDAVLGSGEAALTEL 953 >gi|222528088|ref|YP_002571970.1| non-specific serine/threonine protein kinase [Caldicellulosiruptor bescii DSM 6725] gi|222454935|gb|ACM59197.1| Non-specific serine/threonine protein kinase [Caldicellulosiruptor bescii DSM 6725] Length = 1112 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 83/209 (39%), Gaps = 23/209 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K ++E DL+G S + Q+ + + E KI+ E Sbjct: 896 LKAREDIKKE--IDLKGFEKSKIKIFSIFTRLRQICCHPKLFLQNY---EGSSGKIELFE 950 Query: 61 VIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGK 108 I+E + ++V + L ++ + ++N G+ Sbjct: 951 EILEDVIESGHRVVVFSQWVEMLKILEERIKEKGFEYFYLDGSTKSEERIDMVNKFNSGQ 1010 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G ++++ + LWW+ +E + R + G + +V V+ Sbjct: 1011 KQVFLVSLKAGGFGLNLT-GADVVILYDLWWNPA-----VENQAMDRAHRIGQENSVQVF 1064 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI +NTI+E + + + K + D ++++ Sbjct: 1065 RLITRNTIEERIFELQQKKKDLFDSIVSS 1093 >gi|315648297|ref|ZP_07901398.1| SNF2-related protein [Paenibacillus vortex V453] gi|315276943|gb|EFU40286.1| SNF2-related protein [Paenibacillus vortex V453] Length = 1109 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 73/213 (34%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K ++E L G + + Q+ + E E K Sbjct: 884 KLYTAYLAKLRQETLKHLAQDGFQKSRIRILAGITRLRQICCHPALFVEGY---EGSSAK 940 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQE 103 + L IE+ ++V F L + + Sbjct: 941 FEQLLETIEECRLAGRRMLVFSQFTGMLKLIAGELGYRGIPSFYLDGQTPSAERVELCER 1000 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ + + G GLNL G + ++ + LWW+ Q R + G K+ Sbjct: 1001 FNEGEREVFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QATDRAHRIGQKK 1054 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+AQ+TI++ + + K + + L+ Sbjct: 1055 VVQVIRLVAQDTIEDKMYALQQKKKNLIEELVQ 1087 >gi|309791592|ref|ZP_07686086.1| non-specific serine/threonine protein kinase [Oscillochloris trichoides DG6] gi|308226372|gb|EFO80106.1| non-specific serine/threonine protein kinase [Oscillochloris trichoides DG6] Length = 1064 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 71/209 (33%), Gaps = 22/209 (10%) Query: 2 KQYHKFQREL------YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y+K + + +G + ++ Q+ N DE+ E Sbjct: 843 KLYNKTRDHYRSLLLGMIEQEGIDDARMKILEGLLRLRQICNHPRLMDEKFRGTSGKFE- 901 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNE 106 + + +A ++ F L ++ A+ G T + N+ Sbjct: 902 LLLETLETLQAEGHKALIFSQFVQMLTIIREALDARKIPYAYLDGSTRKRQEVVDTFQND 961 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +P + G GLNL + ++ WW+ R + G R VF Sbjct: 962 PDLPFFLISLKAGGVGLNLTA-ADYVIHVDPWWNPAIEM-----QATDRTHRIGQTRPVF 1015 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY LI + T++E +L K + + L+ Sbjct: 1016 VYKLITRETVEEKILLLQEQKRALVEQLI 1044 >gi|229153405|ref|ZP_04281583.1| Helicase, SNF2/RAD54 [Bacillus cereus m1550] gi|228630009|gb|EEK86660.1| Helicase, SNF2/RAD54 [Bacillus cereus m1550] Length = 856 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 L +I K ++ + + I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVPFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|20089087|ref|NP_615162.1| SNF2 family helicase [Methanosarcina acetivorans C2A] gi|19913949|gb|AAM03642.1| helicase (SNF2 family) [Methanosarcina acetivorans C2A] Length = 1078 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 73/225 (32%), Gaps = 35/225 (15%) Query: 1 MKQYHKFQRE----LYCDLQG----------ENIEAFNSASKTVKCLQLANGAVYYDEEK 46 MK Y +E L+ S + Q+ N + ++ Sbjct: 833 MKTYCTLTKEQASLYAAVLEDIEETMEEAEEGIQRKGIILSALTRLKQVCNHPAQFLKDN 892 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRT 93 K+ L +++ N +V F L++ G Sbjct: 893 SAVPGRSGKLARLTEMLDVILENGEKALVFTQFAEMGKMLKEHLQASFGCEVLFLHGGVP 952 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ + EG +P+ + G GLNL G N + F WW+ +E Sbjct: 953 RKQRDRMLERFQEGKEYLPIFVLSLKAGGTGLNLT-GANHVFHFDRWWNPA-----VENQ 1006 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + V V+ I T++E + + + K + + ++ Sbjct: 1007 ATDRAFRIGQTKNVEVHKFICAGTLEEKIDEIIERKVQVAENVVG 1051 >gi|89897890|ref|YP_515000.1| SWF/SNF family helicase [Chlamydophila felis Fe/C-56] gi|89331262|dbj|BAE80855.1| swi/snf family helicase 2 [Chlamydophila felis Fe/C-56] Length = 1206 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 81/202 (40%), Gaps = 18/202 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVIIEKA--NAAPII 72 + + + + + Q+ N + + H K +A ++ + + ++ Sbjct: 976 EEQTVNYLHVFALLNHLKQICNHPAIFFKNPDKYREHESGKWEAFVRLLHDSLASGCKVV 1035 Query: 73 VAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 V + + + + A QG++L++ + + + + G G+ Sbjct: 1036 VFSQYIHMIRIIMLYLEEIGVKYASIQGKSLNRKEEIEYFTTDPECRVFVGSLLAAGTGI 1095 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL GN+++ + WW+ + E + R + G K VF+Y L+ ++T++E + Sbjct: 1096 NLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQKNTVFIYKLMTEDTLEERIHYL 1149 Query: 184 LRTKSTIQDLLLNALKKETIHV 205 + K + D +++ +H+ Sbjct: 1150 IEKKIRLLDKVISTQDSNILHM 1171 >gi|229189952|ref|ZP_04316960.1| Helicase, SWF/SNF [Bacillus cereus ATCC 10876] gi|228593444|gb|EEK51255.1| Helicase, SWF/SNF [Bacillus cereus ATCC 10876] Length = 1064 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 23/214 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNHQAIPYFYLDGSTPAQERVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 A TI+E + + +K + ++ +++ + Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEKLASI 1053 >gi|228907542|ref|ZP_04071399.1| Helicase, SWF/SNF [Bacillus thuringiensis IBL 200] gi|228852034|gb|EEM96831.1| Helicase, SWF/SNF [Bacillus thuringiensis IBL 200] Length = 1064 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 73/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 AQ TI+E + + +K + ++ +++ Sbjct: 1020 AQGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|77361962|ref|YP_341536.1| helicase domain-containing protein [Pseudoalteromonas haloplanktis TAC125] gi|76876873|emb|CAI89090.1| putative protein with helicase domain [Pseudoalteromonas haloplanktis TAC125] Length = 1351 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 70/207 (33%), Gaps = 21/207 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + E+ + + K + E + K+ E I Sbjct: 1135 LYEATRLNALEQASQEDSQYITILASLTKLRRACIAPQLLIENSK---LPSSKLDTAEAI 1191 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 IE+ N ++ F L + +K + ++ G+ P Sbjct: 1192 IEELLENDHQALIFSQFVDVLKLVEQRLKKRGIAYCYLDGSMSSNKRKQQVDKFQAGEAP 1251 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL + ++ WW+ Q R + G R V VY L Sbjct: 1252 LFLISLKAGGTGLNLTA-ADYVLHLDPWWNPAVEQ-----QASDRAHRLGQTRPVTVYRL 1305 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 IAQNTI+E +LQ K + D +L+ Sbjct: 1306 IAQNTIEEKILQLHEHKQALADKVLSG 1332 >gi|229147777|ref|ZP_04276120.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST24] gi|228635790|gb|EEK92277.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-ST24] Length = 856 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|149924028|ref|ZP_01912411.1| SNF2/helicase domain protein [Plesiocystis pacifica SIR-1] gi|149815111|gb|EDM74664.1| SNF2/helicase domain protein [Plesiocystis pacifica SIR-1] Length = 1158 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 70/222 (31%), Gaps = 24/222 (10%) Query: 2 KQYHKFQRELYCDLQGENIE------AFNSASKTVKCLQLANGAVYYDEEKHWKEV-HDE 54 + Y + + + G + + + Q + V Sbjct: 869 ELYERVRHTYRATVLGAVDDRGVRGATLHILEALTRLRQACCHPALLPFPEAQAMVARSA 928 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLA--------RLQKAFPQGRTLDKDPCTIQEW 104 KI+ L +++ +A +V + S L + + + W Sbjct: 929 KIELLVLLLREAIAGGHRSLVFSQWPSFLDHVSAALDEQTVAHLRLDGSTRDRGAVLDRW 988 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + P+ + G GL+L + + WW+ E R + G R Sbjct: 989 QDPAGPPVFLISTKAGGVGLDLTA-ADHVFHLDPWWNPAA-----EDQATDRAHRIGQDR 1042 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V VY L+A +T+++ +L+ K + ++ + E + Sbjct: 1043 PVMVYKLVAADTVEDKILELQARKRKLFQATVDTDRLEVAEL 1084 >gi|315926199|ref|ZP_07922399.1| snf2 family helicase [Pseudoramibacter alactolyticus ATCC 23263] gi|315620643|gb|EFV00624.1| snf2 family helicase [Pseudoramibacter alactolyticus ATCC 23263] Length = 478 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 94/211 (44%), Gaps = 17/211 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y+ + + +L+ + + N +K ++ QL G + DE ++V K+ LE Sbjct: 268 LKLYYSLVEDSFAELEEDEVTTTNILTKLLRLSQLTGGFISGDESDVPEQVSTAKLSVLE 327 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKI 109 II+ +++ F +L + + G +++ Q N+ + Sbjct: 328 DIIDSAADEGRKLVIIARFVPELHAICSLLDKKGINHSLIMGGVKNREEQISQFQNDPDV 387 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G+ L ++ F+SL + + ++Q RI +AG K + Sbjct: 388 TVFVGQIATAGLGITLTASSTMV-FYSLDYSMSTYEQTKARI-----HRAGQKYPCTYIH 441 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LIA T+D+ VL+ LR+K+ + L++ ++ Sbjct: 442 LIADGTVDQKVLRALRSKANLAKTLVDDYRR 472 >gi|206970802|ref|ZP_03231754.1| putative helicase [Bacillus cereus AH1134] gi|206734438|gb|EDZ51608.1| putative helicase [Bacillus cereus AH1134] Length = 1064 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 23/214 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNHQAIPYFYLDGSTPAQERVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 A TI+E + + +K + ++ +++ + Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEKLASI 1053 >gi|229050914|ref|ZP_04194465.1| Helicase, SNF2/RAD54 [Bacillus cereus AH676] gi|228722459|gb|EEL73853.1| Helicase, SNF2/RAD54 [Bacillus cereus AH676] Length = 856 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|229112656|ref|ZP_04242192.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock1-15] gi|228670788|gb|EEL26096.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock1-15] Length = 856 Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQLVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|92118340|ref|YP_578069.1| SNF2-related [Nitrobacter hamburgensis X14] gi|91801234|gb|ABE63609.1| SNF2-related protein [Nitrobacter hamburgensis X14] Length = 902 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 77/225 (34%), Gaps = 30/225 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + EL L+ + + ++ Q+ N + + W E K+ L Sbjct: 667 LYQQAVAELAGHLEEVDGIKRRGIVLAFLMRLKQICNHPSQWLGDGAWNEEDSGKLGRLR 726 Query: 61 VI--IEKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 I + A +V F R + K ++++ + Sbjct: 727 DIAEVVAARQEKALVFTQFKETTAPLLAFLGSVFGRPGLVLHGETEVKKRKDLVRQFQED 786 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +P + G GLNL + ++ F WW+ +E R + G + V Sbjct: 787 EDVPFFVLSVKAGGTGLNLTA-ASHVIHFDRWWNPA-----VENQATDRAFRVGQTKNVL 840 Query: 167 VYYLIAQNTIDELVLQRLRTKSTI--------QDLLLNALKKETI 203 V+ + + T++E + + +K + D+LL +K E + Sbjct: 841 VHKFLCRGTVEEKIDHMIESKKQLAGDFLSGGADILLTEMKGEEL 885 >gi|312959636|ref|ZP_07774153.1| SNF2-like protein [Pseudomonas fluorescens WH6] gi|311286353|gb|EFQ64917.1| SNF2-like protein [Pseudomonas fluorescens WH6] Length = 896 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 82/212 (38%), Gaps = 23/212 (10%) Query: 3 QYHKFQ----RELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHW-KEVHDEK 55 Y + +++ ++ + + +K Q+ ++ + K Sbjct: 664 VYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDATPPARGSSSGK 723 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWN 105 + +L ++++ A I++ F S L+ ++ + ++++ Sbjct: 724 LDSLLEMLDELFAEGRRILLFSQFTSMLSLIEAELKKRGIAYALLTGQTRDRRTPVKDFQ 783 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 GK+ + + G GLNL + ++ + WW+ E R + G ++ V Sbjct: 784 SGKLQIFLISLKAGGVGLNLTE-ADTVIHYDPWWNPAT-----ENQATDRAYRIGQEKPV 837 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 FVY +IA+ T++E + + KS + +L+ Sbjct: 838 FVYKMIARGTVEEKIQHLQKEKSDLAAGVLDG 869 >gi|228900434|ref|ZP_04064661.1| Helicase, SWF/SNF [Bacillus thuringiensis IBL 4222] gi|228859174|gb|EEN03607.1| Helicase, SWF/SNF [Bacillus thuringiensis IBL 4222] Length = 1064 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 73/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGEL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 AQ TI+E + + +K + ++ +++ Sbjct: 1020 AQGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|134288423|ref|YP_001110586.1| SNF2-related protein [Burkholderia vietnamiensis G4] gi|134133073|gb|ABO59783.1| SNF2-related protein [Burkholderia vietnamiensis G4] Length = 948 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 77/216 (35%), Gaps = 24/216 (11%) Query: 3 QYHKFQ-------RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 Y + RE D +G S+ +K Q+ E+ ++ K Sbjct: 709 LYETVRASAQFVVREAVAD-RGLGRSTITVLSQILKLRQVCCDPRLLRLEQSEQKKPSAK 767 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWN 105 ++ L ++ + + ++V F + + + + + + + Sbjct: 768 LEYLMNMLRELLGDGRRVVVFSAFLTMVDIIADRLRDDQVEFEVITGETQNTDRAKERFQ 827 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 ++PLL G G NL + ++ + WW+ E + R + G +A+ Sbjct: 828 NQEVPLLLCTLKVGGVGHNLTA-ADTVILYDPWWNPAA-----ENQAMDRAHRIGQTKAL 881 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 FVY LI +I+E ++ K + +L+ E Sbjct: 882 FVYKLIMAGSIEERIVAMQERKDALMKAILDDDFGE 917 >gi|237747228|ref|ZP_04577708.1| helicase [Oxalobacter formigenes HOxBLS] gi|229378579|gb|EEO28670.1| helicase [Oxalobacter formigenes HOxBLS] Length = 1126 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 88/222 (39%), Gaps = 25/222 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDEEKHWKEVH-D 53 + Y REL + I + +K Q+ + K ++ Sbjct: 892 QIYES-VRELMDKKVQDEIAKYGIAHCQIIILEALLKLRQVCCDPRLLRGSAYKKTLNAS 950 Query: 54 EKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQE 103 K+ L ++E+ +V F S L+ ++K R I+ Sbjct: 951 AKLSELMEMLEELLLEKRHILVFSQFTSMLSLIEKELNSRRIPYALLTGDTADRASAIRH 1010 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +GK+P+ + G GLNL + ++ + WW+ +E R + G + Sbjct: 1011 FQDGKVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQATDRAWRIGQDK 1064 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VFVY LIA+ T++E + + + K+ + + +L++ + + + + Sbjct: 1065 PVFVYKLIAKGTLEEQIQELQQRKADLANAMLSSGQAQHVQI 1106 >gi|257867846|ref|ZP_05647499.1| Snf2 family protein [Enterococcus casseliflavus EC30] gi|257874174|ref|ZP_05653827.1| Snf2 family protein [Enterococcus casseliflavus EC10] gi|257801929|gb|EEV30832.1| Snf2 family protein [Enterococcus casseliflavus EC30] gi|257808338|gb|EEV37160.1| Snf2 family protein [Enterococcus casseliflavus EC10] Length = 1054 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 84/221 (38%), Gaps = 26/221 (11%) Query: 2 KQYHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + R++ ++ + + + + + Q+ + E+ E K+ Sbjct: 828 KIYLAYLRQMREEIAQMDSTSFRKNRISILAGLTRLRQICCDPRLFVEDY---EGSSGKL 884 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW 104 + ++ ++ K N +++ F S L+ ++ + + Sbjct: 885 EQVKDLLLAAKENGRRVLLFSQFTSMLSIIEEELAQEGFESFYLRGSTPPQDRLTMVDAF 944 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G+ + + G GLNL G + ++ + LWW+ +E R + G K Sbjct: 945 NSGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRIGQKNV 998 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V+ +IA+ TI+E + + K + ++ + + + Sbjct: 999 VEVWRMIAEGTIEERMDALQQEKRELFQKVIQGNETQLQQM 1039 >gi|228952232|ref|ZP_04114322.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807447|gb|EEM53976.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 1064 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 23/214 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNHQAIPYFYLDGSTPAQERVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 A TI+E + + +K + ++ +++ + Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEKLASI 1053 >gi|229079035|ref|ZP_04211586.1| Helicase, SWF/SNF [Bacillus cereus Rock4-2] gi|228704209|gb|EEL56644.1| Helicase, SWF/SNF [Bacillus cereus Rock4-2] Length = 1064 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 23/214 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNHQAIPYFYLDGSTPAQERVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 A TI+E + + +K + ++ +++ + Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEKLASI 1053 >gi|229193493|ref|ZP_04320440.1| Helicase, SNF2/RAD54 [Bacillus cereus ATCC 10876] gi|228590025|gb|EEK47897.1| Helicase, SNF2/RAD54 [Bacillus cereus ATCC 10876] Length = 856 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|296502447|ref|YP_003664147.1| SWF/SNF family helicase [Bacillus thuringiensis BMB171] gi|296323499|gb|ADH06427.1| SWF/SNF family helicase [Bacillus thuringiensis BMB171] Length = 1064 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 23/214 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 A TI+E + + +K + ++ +++ + Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEKLASI 1053 >gi|228968365|ref|ZP_04129360.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar sotto str. T04001] gi|228791331|gb|EEM38938.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar sotto str. T04001] Length = 856 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEQFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|81299683|ref|YP_399891.1| DEAD/DEAH box helicase-like [Synechococcus elongatus PCC 7942] gi|81168564|gb|ABB56904.1| DEAD/DEAH box helicase-like [Synechococcus elongatus PCC 7942] Length = 1019 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 64/216 (29%), Gaps = 26/216 (12%) Query: 4 YHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKH---WKEVHDEKIKA 58 Y E +++ + + QL N E+ K++ Sbjct: 782 YQVLVNEALANIEASEGIQRRGQILALLTRLKQLCNHPSLLLEKPKLDPNFGDRSAKLQR 841 Query: 59 LEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 L ++ + +V F L R + + Sbjct: 842 LLEMLAELTDAGDRALVFTQFAGWGSLLQQFLQEQLGREVLFLSGSTKKGDRQQMVDRFQ 901 Query: 106 EGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL N + + WW+ +E R + G +R Sbjct: 902 NDPQAPAIFILSLKAGGVGLNLTK-ANHVFHYDRWWNPA-----VENQATDRAFRIGQRR 955 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ + T++E + Q + +K + ++ + + Sbjct: 956 NVQVHKFVCAGTLEEKIDQMIASKQALAQQIVGSGE 991 >gi|56750675|ref|YP_171376.1| putative SNF2 helicase [Synechococcus elongatus PCC 6301] gi|56685634|dbj|BAD78856.1| putative SNF2 helicase [Synechococcus elongatus PCC 6301] Length = 1019 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 64/216 (29%), Gaps = 26/216 (12%) Query: 4 YHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKH---WKEVHDEKIKA 58 Y E +++ + + QL N E+ K++ Sbjct: 782 YQVLVNEALANIEASEGIQRRGQILALLTRLKQLCNHPSLLLEKPKLDPNFGDRSAKLQR 841 Query: 59 LEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 L ++ + +V F L R + + Sbjct: 842 LLEMLAELTDAGDRALVFTQFAGWGSLLQQFLQEQLGREVLFLSGSTKKGDRQQMVDRFQ 901 Query: 106 EGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL N + + WW+ +E R + G +R Sbjct: 902 NDPQAPAIFILSLKAGGVGLNLTK-ANHVFHYDRWWNPA-----VENQATDRAFRIGQRR 955 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ + T++E + Q + +K + ++ + + Sbjct: 956 NVQVHKFVCAGTLEEKIDQMIASKQALAQQIVGSGE 991 >gi|228923978|ref|ZP_04087255.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835777|gb|EEM81141.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 856 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEQFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|229072708|ref|ZP_04205910.1| Helicase, SNF2/RAD54 [Bacillus cereus F65185] gi|229181505|ref|ZP_04308833.1| Helicase, SNF2/RAD54 [Bacillus cereus 172560W] gi|228602080|gb|EEK59573.1| Helicase, SNF2/RAD54 [Bacillus cereus 172560W] gi|228710684|gb|EEL62657.1| Helicase, SNF2/RAD54 [Bacillus cereus F65185] Length = 856 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|228911082|ref|ZP_04074889.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis IBL 200] gi|228848586|gb|EEM93433.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis IBL 200] Length = 856 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEQFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|291009114|ref|ZP_06567087.1| Snf2/Rad54 family helicase [Saccharopolyspora erythraea NRRL 2338] Length = 994 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 66/213 (30%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ + + K Q+ N + + K+ LE Sbjct: 764 LYQAVVDDMLRRIDESDGMERRGLVLATMSKLKQVCNHPAQFLGDGSPLAGRSGKLARLE 823 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNEG 107 I+E+ + + F L G + ++ + Sbjct: 824 EILEEVLADGDKALCFTQFAGFGGMLVPHLSARFDTEVLYLHGGTPKKQRDAMVERFQSA 883 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + + G GL L G N ++ WW+ +E R + G +R V Sbjct: 884 DGPAVFMLSLKAGGTGLTLT-GANHVIHLDRWWNPA-----VEDQATDRAFRIGQRRDVQ 937 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V L T++E + + L K + L++ A + Sbjct: 938 VRKLTCIGTLEEKIDRMLEDKKALAQLVVGAGE 970 >gi|134098193|ref|YP_001103854.1| Snf2/Rad54 family helicase [Saccharopolyspora erythraea NRRL 2338] gi|133910816|emb|CAM00929.1| probable helicase, Snf2/Rad54 family [Saccharopolyspora erythraea NRRL 2338] Length = 988 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 66/213 (30%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ + + K Q+ N + + K+ LE Sbjct: 758 LYQAVVDDMLRRIDESDGMERRGLVLATMSKLKQVCNHPAQFLGDGSPLAGRSGKLARLE 817 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNEG 107 I+E+ + + F L G + ++ + Sbjct: 818 EILEEVLADGDKALCFTQFAGFGGMLVPHLSARFDTEVLYLHGGTPKKQRDAMVERFQSA 877 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + + G GL L G N ++ WW+ +E R + G +R V Sbjct: 878 DGPAVFMLSLKAGGTGLTLT-GANHVIHLDRWWNPA-----VEDQATDRAFRIGQRRDVQ 931 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V L T++E + + L K + L++ A + Sbjct: 932 VRKLTCIGTLEEKIDRMLEDKKALAQLVVGAGE 964 >gi|220930817|ref|YP_002507726.1| SNF2-related protein [Clostridium cellulolyticum H10] gi|220001145|gb|ACL77746.1| SNF2-related protein [Clostridium cellulolyticum H10] Length = 1077 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 78/216 (36%), Gaps = 27/216 (12%) Query: 2 KQY----HKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + ++ ++ S + QL + + E K Sbjct: 854 KLYVAYLEKAKGDILKEINENGYERSQIKILSVLTRLRQLCCHPSLFVDNY---EGDSGK 910 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + L+ I+ + I++ F S LA +++ + D+ + Sbjct: 911 LLLLKEIVGDSLTSGHRILLFSQFTSMLAIIRQWLQEDGIDYLYLDGSTPADERMKMVTN 970 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + S G GLNL G + ++ + WW+ +E R + G + Sbjct: 971 FNNGQGQIFLLSLKSGGTGLNLT-GADTVIHYDPWWNPA-----VEDQATDRAYRIGQLK 1024 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V L+ TI+E +L K + D ++ + + Sbjct: 1025 TVHVMKLVTHGTIEEKILHLKDRKKQLVDAVIQSGE 1060 >gi|218896786|ref|YP_002445197.1| putative helicase [Bacillus cereus G9842] gi|218540700|gb|ACK93094.1| putative helicase [Bacillus cereus G9842] Length = 1064 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 73/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGEL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 AQ TI+E + + +K + ++ +++ Sbjct: 1020 AQGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|29828520|ref|NP_823154.1| SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] gi|29605624|dbj|BAC69689.1| putative SNF2/RAD54 family helicase [Streptomyces avermitilis MA-4680] Length = 962 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 72/221 (32%), Gaps = 24/221 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEE----KHWKEVHDEKI 56 Y RE ++ Q+ + Y +E K+ Sbjct: 733 LYEAVVRESMLAIETAEGIGRRGLVLKLLTSLKQICDHPALYLKEDAGGTAGLAARSGKL 792 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 L+ +++ +V + + G + + + + Sbjct: 793 ALLDELLDTLLSEDGSALVFTQYVGMARLITAHLASRAVPVELLHGGTPVPERERMVDRF 852 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G P+L + G GLNL G+ +V F WW+ +E R + G + Sbjct: 853 QSGTTPVLVLSLKAAGTGLNLTRAGH-VVHFDRWWNPA-----VEEQATDRAYRIGQTQP 906 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V+ LI + T+++ + + L K + D +L + + + Sbjct: 907 VQVHRLITEGTVEDRIAEMLEAKRALADAILGSGESSLTEL 947 >gi|256003807|ref|ZP_05428794.1| SNF2-related protein [Clostridium thermocellum DSM 2360] gi|255992145|gb|EEU02240.1| SNF2-related protein [Clostridium thermocellum DSM 2360] gi|316939145|gb|ADU73179.1| SNF2 helicase associated domain protein [Clostridium thermocellum DSM 1313] Length = 1087 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 79/213 (37%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + ++ ++ G S + Q+ + E + K Sbjct: 864 KIYLAYLKKAKAEVAMELQTNGFEKSQIKILSLLTRLRQICCHPSLFIENYSGE---SGK 920 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 I+ALE I+ + I++ F S L +++ Q ++ Sbjct: 921 IQALEEIMTDAFDSGHRILLFSQFTSMLEIIKQFLDQKSVEYFYLDGSTKAQDRVEMVKA 980 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G L + G GLNL G ++++ F WW+ +E R + G K Sbjct: 981 FNQGTGKLFLISLKAGGTGLNLT-GADMVIHFDPWWNPA-----VEDQASDRAHRIGQKN 1034 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LI Q TI++ + + + K + D ++ Sbjct: 1035 VVQVMKLITQGTIEDKIFELQQKKKEMIDSVIQ 1067 >gi|257876739|ref|ZP_05656392.1| Snf2 family protein [Enterococcus casseliflavus EC20] gi|257810905|gb|EEV39725.1| Snf2 family protein [Enterococcus casseliflavus EC20] Length = 1054 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 84/221 (38%), Gaps = 26/221 (11%) Query: 2 KQYHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + R++ ++ + + + + + Q+ + E+ E K+ Sbjct: 828 KIYLAYLRQMREEIAQMDSTSFRKNRISILAGLTRLRQICCDPRLFVEDY---EGSSGKL 884 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW 104 + ++ ++ K N +++ F S L+ ++ + + Sbjct: 885 EQVKDLLLAAKENGRRVLLFSQFTSMLSIIEEELAQEGFESFYLRGSTPPQDRLTMVDAF 944 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G+ + + G GLNL G + ++ + LWW+ +E R + G K Sbjct: 945 NSGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRIGQKNV 998 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V+ +IA+ TI+E + + K + ++ + + + Sbjct: 999 VEVWRMIAEGTIEERMDALQQEKRELFQKVIQGNETQLQQM 1039 >gi|149918387|ref|ZP_01906877.1| swf/snf family helicase [Plesiocystis pacifica SIR-1] gi|149820687|gb|EDM80097.1| swf/snf family helicase [Plesiocystis pacifica SIR-1] Length = 1385 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 72/204 (35%), Gaps = 20/204 (9%) Query: 4 YHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y +R L+G + ++ + Q A DE D + L Sbjct: 1170 YEALRRRALESLEGGEQHTQRVRILAELTRLRQAAVDPRLLDERGPAGAKIDALTRQLLS 1229 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPL 111 + + +V F +A +++AF + + + G+ + Sbjct: 1230 L--REEGHRALVFTQFLGAMALMRQAFEAAGIEYLELDGATPAAERARRVDAFQAGEGDV 1287 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+NL G + ++ WW+ +E R + G R V VY L+ Sbjct: 1288 FMLSLRAGGVGMNLT-GADYVLHLDPWWNPA-----VEDQATDRAHRLGQSRPVTVYRLV 1341 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 ++ TI+E +L K + D LL Sbjct: 1342 SKGTIEEKILALHAEKRELTDDLL 1365 >gi|311896870|dbj|BAJ29278.1| putative truncated ATP-dependent helicase [Kitasatospora setae KM-6054] Length = 441 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 65/209 (31%), Gaps = 22/209 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +L L G + + Q+ N ++ K++ L Sbjct: 211 LYQAVVADLLDRLGGVRGVERKGAVLAALGRLKQVCNHPAQLLRDRSPLGGRSGKVERLV 270 Query: 61 VIIEKA--NAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 ++ +A ++V + L G + + + + Sbjct: 271 ALLREALAEGDRVLVFTQYAEFGALLQPHLRRRLDTPVLYLHGGLSAPRRQELVDSFQSP 330 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL N +V WW+ E R + G R V Sbjct: 331 DGPRVFLLSLKAGGTGLNLTA-ANQVVHLDRWWNPAT-----EDQATDRAHRIGQHRDVQ 384 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V L+ TI+E + + + TK + D ++ Sbjct: 385 VRKLVCTGTIEERIAELIDTKRELADSVV 413 >gi|229082458|ref|ZP_04214921.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock4-2] gi|228700890|gb|EEL53413.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock4-2] Length = 856 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|149196784|ref|ZP_01873837.1| SNF2-related protein [Lentisphaera araneosa HTCC2155] gi|149139894|gb|EDM28294.1| SNF2-related protein [Lentisphaera araneosa HTCC2155] Length = 880 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 70/203 (34%), Gaps = 21/203 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKA 66 RE D +G + S +K Q+ N + +K K + L I K Sbjct: 659 REAIADSEGIQRKGL-VLSSLMKFKQICNHPDQFLGGGPYKTTESGKFQRLMEICETIKE 717 Query: 67 NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 ++V F ++ K + + + +P Sbjct: 718 KREKVLVFTQFKEITEELAKFMESYFGHSGLVLHGSISVKKRKEMVARFQSDEYVPFFIL 777 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL N +V F WW+ +E R + G K+ V V+ + + Sbjct: 778 SIKAGGTGLNLTA-ANHVVHFDRWWNPA-----VENQATDRAFRIGQKKNVMVHKFVCKG 831 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 TI+E + L K I D +L++ Sbjct: 832 TIEEKISTMLEDKQKISDEVLSS 854 >gi|171913352|ref|ZP_02928822.1| Non-specific serine/threonine protein kinase [Verrucomicrobium spinosum DSM 4136] Length = 1140 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 74/213 (34%), Gaps = 25/213 (11%) Query: 2 KQY-HKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + + L E N + Q+ +E K Sbjct: 910 KLYREQLAQAQHMILTSTGAEMLNKRRFAILQAITRLRQICCHPALVQPGADDEE--SAK 967 Query: 56 IKALEVIIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEW 104 + AL ++++ + ++V F + L ++ + G + ++ Sbjct: 968 LNALMELLDQLHDEGHKVLVFSQFVAMLKIIRDKLTGLNRPFHWLTGASQNRADIVKSFQ 1027 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G GLNL + ++ + WW+ +E + R + G + Sbjct: 1028 ETPDPSVFLLSLKAGGSGLNLTA-ASYVILYDPWWNPA-----VENQAIDRAHRIGQTQP 1081 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V Y L+A+N+I+E + + KS + +L Sbjct: 1082 VMAYRLLAKNSIEEKIRHLQQQKSLLSSDVLGE 1114 >gi|228961502|ref|ZP_04123113.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798216|gb|EEM45218.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 856 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|228975316|ref|ZP_04135873.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981952|ref|ZP_04142247.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis Bt407] gi|228778064|gb|EEM26336.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis Bt407] gi|228784449|gb|EEM32471.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar thuringiensis str. T01001] Length = 855 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 632 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKI 691 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 692 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 751 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 752 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 805 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 806 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 837 >gi|281418599|ref|ZP_06249618.1| SNF2-related protein [Clostridium thermocellum JW20] gi|281407683|gb|EFB37942.1| SNF2-related protein [Clostridium thermocellum JW20] Length = 1087 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 79/213 (37%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + ++ ++ G S + Q+ + E + K Sbjct: 864 KIYLAYLKKAKAEVAMELQTNGFEKSQIKILSLLTRLRQICCHPSLFIENYSGE---SGK 920 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 I+ALE I+ + I++ F S L +++ Q ++ Sbjct: 921 IQALEEIMTDAFDSGHRILLFSQFTSMLEIIKQFLDQKSVEYFYLDGSTKAQDRVEMVKA 980 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G L + G GLNL G ++++ F WW+ +E R + G K Sbjct: 981 FNQGTGKLFLISLKAGGTGLNLT-GADMVIHFDPWWNPA-----VEDQASDRAHRIGQKN 1034 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LI Q TI++ + + + K + D ++ Sbjct: 1035 VVQVMKLITQGTIEDKIFELQQKKKEMIDSVIQ 1067 >gi|149919778|ref|ZP_01908255.1| SNF2/helicase domain protein [Plesiocystis pacifica SIR-1] gi|149819385|gb|EDM78816.1| SNF2/helicase domain protein [Plesiocystis pacifica SIR-1] Length = 1047 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 75/213 (35%), Gaps = 23/213 (10%) Query: 1 MKQYHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 + Y++ + ++ G + + Q+ + + Sbjct: 810 LALYNRILKAAKSEITTRVGEVGIEKSQMTILAALTRLRQVCTDPKLLNLPEGTTVPKST 869 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQE 103 K++A +I +A + +V F S + + G T ++D + Sbjct: 870 KLEAFRALIGEAVGSGRKALVFSQFVSMQKILAGTLEELEIDYLWLHGGTTNRDELVQRF 929 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + P+ + G GL L + ++ + WW+ +E R + G ++ Sbjct: 930 QQKSGPPVFLISLKAGGAGLTLTE-ADTVIHYDPWWNPA-----VEDQATDRAHRIGQEK 983 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY L+ ++T+++ +++ K I + L Sbjct: 984 PVMVYRLVVEHTVEQKMVELGAEKRKIAESALG 1016 >gi|125974936|ref|YP_001038846.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] gi|125715161|gb|ABN53653.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] Length = 1087 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 79/213 (37%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + ++ ++ G S + Q+ + E + K Sbjct: 864 KIYLAYLKKAKAEVAMELQTNGFEKSQIKILSLLTRLRQICCHPSLFIENYSGE---SGK 920 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 I+ALE I+ + I++ F S L +++ Q ++ Sbjct: 921 IQALEEIMTDAFDSGHRILLFSQFTSMLEIIKQFLDQKSVEYFYLDGSTKAQDRVEMVKA 980 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G L + G GLNL G ++++ F WW+ +E R + G K Sbjct: 981 FNQGTGKLFLISLKAGGTGLNLT-GADMVIHFDPWWNPA-----VEDQASDRAHRIGQKN 1034 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LI Q TI++ + + + K + D ++ Sbjct: 1035 VVQVMKLITQGTIEDKIFELQQKKKEMIDSVIQ 1067 >gi|300854652|ref|YP_003779636.1| putative helicase [Clostridium ljungdahlii DSM 13528] gi|300434767|gb|ADK14534.1| predicted helicase [Clostridium ljungdahlii DSM 13528] Length = 1088 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + + EL +++ + I S + Q+ + E E + K++AL I+ Sbjct: 871 QAKEELNNEIRDKGINKSKIKILSIITRLRQICCDPSTFIENY---ESDNGKMEALMGIV 927 Query: 64 EK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 + + I++ F S L +K ++E+NEG+IP+ Sbjct: 928 QNSVNDGHKILLFSQFTSVLKNIGDMFKNENIKYMYLDGSVKAEKRGEMVREFNEGQIPI 987 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL +I++ + WW+ +E R + G K+ V V LI Sbjct: 988 FLISLKAGGTGLNLTS-ADIVIHYDPWWNPA-----VENQASDRAHRIGQKKTVEVIRLI 1041 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 A+ TI+E + + K I + ++ E I Sbjct: 1042 AKGTIEEKIHKIQDKKKEIINNVIEENTGEEI 1073 >gi|295695581|ref|YP_003588819.1| SNF2-related protein [Bacillus tusciae DSM 2912] gi|295411183|gb|ADG05675.1| SNF2-related protein [Bacillus tusciae DSM 2912] Length = 1189 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 65/204 (31%), Gaps = 17/204 (8%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + + + G + + Q+ E E + L + Sbjct: 966 QLRAQQLMQKGGLTENRIAILALITRLRQVCADPALVVPEYDGSSAKLEALLELLRD-YR 1024 Query: 66 ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 +V F L R++ +N G+ + Sbjct: 1025 VAGRRALVFSQFTQMLERIRGRLAQEGIEAFYLDGRTPPKDRLAMADAFNAGERGVFLIS 1084 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL G + ++ + LWW+ ++ + R + G K V V +IA+ T Sbjct: 1085 LRAGGTGLNLT-GADTVILYDLWWNPA-----VDAQAIGRAHRIGQKNPVLVLRVIAKGT 1138 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E + K + D ++ + K Sbjct: 1139 IEERMYALQMKKQALFDRVIESEK 1162 >gi|30023277|ref|NP_834908.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] gi|29898838|gb|AAP12109.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] Length = 918 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 755 LIELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 900 >gi|228955491|ref|ZP_04117496.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804283|gb|EEM50897.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 856 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|291298955|ref|YP_003510233.1| SNF2-like protein [Stackebrandtia nassauensis DSM 44728] gi|290568175|gb|ADD41140.1| SNF2-related protein [Stackebrandtia nassauensis DSM 44728] Length = 621 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 23/212 (10%) Query: 2 KQYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y D G E + Q+ N + ++H K+ Sbjct: 389 KLYSAAVERAMNDGLGSGFERHGRVLKLLTELKQICNHPAQFLRQEHPLTGRSGKLARAT 448 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAF------------PQGRTLDKDPCTIQEWN- 105 ++ +A A +V + L G + + E+ Sbjct: 449 EMLAEAVAEGAQSLVFTQYRVMGELLATHLAAELGLEKVPFLHGGVSQPGRDAMVAEFQS 508 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P+L + G GLNL ++ + WW+ +E R + G + Sbjct: 509 GDDPPPILIVSLKAGGTGLNLTA-ATHVLHYDRWWNPA-----VEDQATDRAHRIGQTKP 562 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY L+ T++E + L K ++ + ++ Sbjct: 563 VTVYKLVTGGTLEERISDLLERKRSLAESIVG 594 >gi|171912733|ref|ZP_02928203.1| hypothetical protein VspiD_16175 [Verrucomicrobium spinosum DSM 4136] Length = 803 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 78/213 (36%), Gaps = 23/213 (10%) Query: 2 KQYHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + E +++ G+ + ++ Q+ N H+K K Sbjct: 577 EVYQRLLEEGREEIRSARKRTGQGSARMTMFTVLLRLRQVCNDLRLLKLGDHFKGQPGGK 636 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEW 104 LE ++++ ++ F L ++ ++ G T D+ Sbjct: 637 WPMLEELLQEIIDGGGKALIFSQFVGMLRLVRDKVQSLEIAHSYLDGGTQDRGGQVSAFQ 696 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++ + L + G+GLNL + ++ WW+ +E + R + G R Sbjct: 697 SDPERKLFLISLKAGGYGLNLTA-ADHVLLVDPWWNPA-----VEAQAIDRAHRIGQGRP 750 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V Y L + T++E +L+ K +I D+ L Sbjct: 751 VTAYRLATRGTVEEKILKLQEKKRSIMDMTLED 783 >gi|296276324|ref|ZP_06858831.1| SNF2 family protein [Staphylococcus aureus subsp. aureus MR1] Length = 455 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 114/200 (57%), Gaps = 8/200 (4%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y +++ + +HD+K+ LE Sbjct: 254 KVYAELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDDEDVRLIHDKKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKK 200 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKA 446 >gi|258404421|ref|YP_003197163.1| SNF2-like protein [Desulfohalobium retbaense DSM 5692] gi|257796648|gb|ACV67585.1| SNF2-related protein [Desulfohalobium retbaense DSM 5692] Length = 1062 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 67/218 (30%), Gaps = 28/218 (12%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + + +G + ++ Q+A ++ K Sbjct: 839 KLYSEIRDHYRAQVLSRVEEKGLAQSKMHVLEGLLRLRQVACHPKLVGGNGQYE---SGK 895 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQE 103 ++ L I + +V F L + + + + Sbjct: 896 LQELRERITAVVGSGHKALVFSQFTRFLRLIKDMLESEGIAYCSLDGRTPAKRRQERVAR 955 Query: 104 WNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + P+ + G GLNL + + WW+ Q ++R + G Sbjct: 956 FQDVDGPPVFTISLKAGGTGLNLTA-ADYVFIADPWWNPAVEMQAVDR-----THRIGQD 1009 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + VF Y + + T++E + K + +L+ K Sbjct: 1010 KTVFTYRFVTEGTVEEKIRTLQNQKQELVQSVLSGSKG 1047 >gi|70726780|ref|YP_253694.1| hypothetical protein SH1779 [Staphylococcus haemolyticus JCSC1435] gi|68447504|dbj|BAE05088.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 452 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 111/202 (54%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + I A + AS + K LQL+NGAV Y +++ + +HD K+ LE Sbjct: 254 KLYDELEKYYILEDETDGTIVAQSGASLSQKILQLSNGAV-YTDDEDVRHIHDRKLDKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 II++A PI++ Y+F D R+ + F T D +WN GK +L AHPAS G Sbjct: 313 EIIDEAQGQPILLFYNFKHDRDRILERFDDVLT-LDDKGYKDKWNSGKAKILLAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQTHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 Q L+ K QD L+ A+K Sbjct: 427 YQALQNKELTQDELMKAIKARI 448 >gi|228938966|ref|ZP_04101566.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971848|ref|ZP_04132469.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978456|ref|ZP_04138833.1| Helicase, SWF/SNF [Bacillus thuringiensis Bt407] gi|228781473|gb|EEM29674.1| Helicase, SWF/SNF [Bacillus thuringiensis Bt407] gi|228787938|gb|EEM35896.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820815|gb|EEM66840.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939468|gb|AEA15364.1| SWF/SNF family helicase [Bacillus thuringiensis serovar chinensis CT-43] Length = 1064 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 AQ TI+E + + +K + ++ +++ Sbjct: 1020 AQGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|229043607|ref|ZP_04191314.1| Helicase, SWF/SNF [Bacillus cereus AH676] gi|228725682|gb|EEL76932.1| Helicase, SWF/SNF [Bacillus cereus AH676] Length = 1064 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 AQ TI+E + + +K + ++ +++ Sbjct: 1020 AQGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|288802766|ref|ZP_06408204.1| SNF2/helicase domain protein [Prevotella melaninogenica D18] gi|288334916|gb|EFC73353.1| SNF2/helicase domain protein [Prevotella melaninogenica D18] Length = 1343 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 76/209 (36%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M Y +RE + + ++ ++ Q+A D ++ K+ A Sbjct: 1124 MAMYEVKRRETEAKILENKADKVSTLAEITHLRQMACSCSLVD---KRWKLPSSKVLAFI 1180 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGK 108 + E N +V F S + ++E+ GK Sbjct: 1181 DLAESLNDSGNRALVFSQFTSFFEEIKKAMETAKLPYLYLDGSTPMSMREKLVKEFQSGK 1240 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N ++ WW+ Q R + G K+ V VY Sbjct: 1241 CPFFLISLKAGGLGLNLT-GANYVIHLDPWWNPAIEQ-----QATDRAYRIGQKQDVTVY 1294 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI+Q+TI+E +L+ +TK + D LL Sbjct: 1295 RLISQHTIEEKILRLHKTKRNLSDSLLEG 1323 >gi|238063663|ref|ZP_04608372.1| SNF2/RAD54 family helicase [Micromonospora sp. ATCC 39149] gi|237885474|gb|EEP74302.1| SNF2/RAD54 family helicase [Micromonospora sp. ATCC 39149] Length = 929 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 77/209 (36%), Gaps = 22/209 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKA 58 Y + ++ +++ V Q+ N +Y E EK+ Sbjct: 702 LYQRVVDDVLAEIRASTTSMARRGLVLKLLVGLKQVCNHPAHYLKEPHGRLTGRSEKLHL 761 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE 106 L+ ++E +V + L++ G + + ++ + Sbjct: 762 LDDLLETILAEEGGALVFTQYVQMARLLKRHLAERGVPAQLLHGGTPVPQREEMVRRFQA 821 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + ++ F WW+ +E R + G + V Sbjct: 822 GEVPVFLLSLKAAGTGLNLTR-ADHVIHFDRWWNPA-----VEEQATDRAYRIGQTKPVQ 875 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ LIAQ T+++ + L +K + D +L Sbjct: 876 VHRLIAQGTLEDRIAALLESKRELADAVL 904 >gi|221124460|ref|XP_002165434.1| PREDICTED: similar to TATA-binding protein-associated factor 172 [Hydra magnipapillata] Length = 562 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 18/186 (9%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 + +K Q+ ++ K+ AL ++ ++V F Sbjct: 335 ISILDALLKLRQVCCDPYLVKGSDIAPDMERAKLHALTDLLVPLVDEGRRVLVFSQFTEL 394 Query: 81 LARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 L + + + +Q + ++P+L + G GLNL + Sbjct: 395 LELIADALSALRLPFLSLTGNTCPAQRGDIVQRFQNQEVPVLLVSLKTGGVGLNLTA-AD 453 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ WW+ +E R + G + VFVY L+ + +I+E +L+ K + Sbjct: 454 TVIHMDPWWNPA-----VEEQATARAHRIGQDQPVFVYKLVVEGSIEERMLELQARKLAL 508 Query: 191 QDLLLN 196 D +L Sbjct: 509 SDSVLG 514 >gi|229011148|ref|ZP_04168341.1| Helicase, SWF/SNF [Bacillus mycoides DSM 2048] gi|228750031|gb|EEL99863.1| Helicase, SWF/SNF [Bacillus mycoides DSM 2048] Length = 1064 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 23/211 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRVLAGLTRLRQICCHPALFVDDYK---GSSAKFDQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGSTPAQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEIIEPGEEKL 1050 >gi|218780869|ref|YP_002432187.1| serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01] gi|218762253|gb|ACL04719.1| Non-specific serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01] Length = 896 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K +EL ++ S ++ Q+ N Y + + K L+ Sbjct: 665 LYAKSVQELAKSIETAEGIERRGIVLSFLMRFKQICNHPSQYIGDGEYSPNKSGKFLRLK 724 Query: 61 VIIEKANAA--PIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 I E+ + ++ F R G + K + + + Sbjct: 725 EICEEIASRQEKALIFTQFREMTDPLAAYLGEIFGREGLILHGGTPVKKRKNLVDVFQRD 784 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + G GLNL + ++ F WW+ +E R + G + V Sbjct: 785 DGPPFFVLSLKAGGTGLNLTN-ASHVIHFDRWWNPA-----VENQATDRAFRIGQHKNVL 838 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ + + T++E + + K + + +L A Sbjct: 839 VHKFVCRGTLEEKIDALIEEKIGLAEGVLKA 869 >gi|311742706|ref|ZP_07716515.1| SNF2/RAD54 family helicase [Aeromicrobium marinum DSM 15272] gi|311314334|gb|EFQ84242.1| SNF2/RAD54 family helicase [Aeromicrobium marinum DSM 15272] Length = 867 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 80/212 (37%), Gaps = 21/212 (9%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y R ++ + + Q+ N + E + K+ L Sbjct: 643 LYEATVRATMAQIESASGIHRRGLIIKLLTQLKQICNHPGQFLRETEGRLTGRSGKLLLL 702 Query: 60 E----VIIEKANAAPIIVAY--------HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 + I+ + AA + Y +D G + + +Q+++ G Sbjct: 703 DDLLPEIVAEDGAALVFTQYARMGHLLSRHLADRGIDHFYLHGGTPIPRRERMVQQFSAG 762 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GLNL + ++ + WW+ +E R + G ++V V Sbjct: 763 EAPVFVLSLKAAGTGLNLTR-ADHVIHYDRWWNPA-----VEDQATDRAHRIGQTKSVQV 816 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + L+++ TI+E + + + +K + D ++NA + Sbjct: 817 HRLMSEGTIEESIAELIASKRALADAVVNAGE 848 >gi|229132678|ref|ZP_04261525.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST196] gi|228650805|gb|EEL06793.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST196] Length = 1068 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 23/211 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K L I+ Sbjct: 853 KLREETLKHLDKDTLRKNKIRVLAGLTRLRQICCHPALFVDDYK---GSSAKFDQLLEIL 909 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 910 EECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGSTPAQERVELCNRFNEGEGDL 969 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 970 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1023 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 A TI+E + + +K + ++ +++ Sbjct: 1024 AHGTIEEKMHELQESKKNLIAEIIEPGEEKL 1054 >gi|229166704|ref|ZP_04294454.1| Helicase, SWF/SNF [Bacillus cereus AH621] gi|228616701|gb|EEK73776.1| Helicase, SWF/SNF [Bacillus cereus AH621] Length = 1064 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 23/211 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRVLAGLTRLRQICCHPALFVDDYK---GSSAKFDQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGSTPAQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEIIEPGEEKL 1050 >gi|163939654|ref|YP_001644538.1| non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] gi|163861851|gb|ABY42910.1| Non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] Length = 1068 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 23/211 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K L I+ Sbjct: 853 KLREETLKHLDKDTLRKNKIRVLAGLTRLRQICCHPALFVDDYK---GSSAKFDQLLEIL 909 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 910 EECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGSTPAQERVELCNRFNEGEGDL 969 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 970 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1023 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 A TI+E + + +K + ++ +++ Sbjct: 1024 AHGTIEEKMHELQESKKNLIAEIIEPGEEKL 1054 >gi|229059502|ref|ZP_04196884.1| Helicase, SWF/SNF [Bacillus cereus AH603] gi|228719785|gb|EEL71379.1| Helicase, SWF/SNF [Bacillus cereus AH603] Length = 1068 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 23/211 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K L I+ Sbjct: 853 KLREETLKHLDKDTLRKNKIRVLAGLTRLRQICCHPALFVDDYK---GSSAKFDQLLEIL 909 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 910 EECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGSTPAQERVELCNRFNEGEGDL 969 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 970 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1023 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 A TI+E + + +K + ++ +++ Sbjct: 1024 AHGTIEEKMHELQESKKNLIAEIIEPGEEKL 1054 >gi|326381641|ref|ZP_08203335.1| SNF2-like protein [Gordonia neofelifaecis NRRL B-59395] gi|326199888|gb|EGD57068.1| SNF2-like protein [Gordonia neofelifaecis NRRL B-59395] Length = 1154 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 72/212 (33%), Gaps = 24/212 (11%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +++L L+ + + QL+ V D V+ KI+ Sbjct: 933 KVYDTYLARDRQQLLGLLENFDGNRIQVLRALTRLRQLSLHPVLVD--GEHANVNSAKIE 990 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN 105 L + +V F L + K I+++ Sbjct: 991 YLSEQLPMLIDEGHSALVFSSFTGFLKLIAGRLDAEDIPYSYLDGSTAITKRAKQIEQFT 1050 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G+ + + G GLNL + WW+ E V R + G RAV Sbjct: 1051 DGRTRVFLISLKAGGFGLNLTA-ADYCFMTDPWWNPAA-----EAQAVDRAHRIGQHRAV 1104 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY +++ TI+E V+ K + D LL+ Sbjct: 1105 TVYRMVSTGTIEEKVIDLQTRKRELFDALLDE 1136 >gi|312139122|ref|YP_004006458.1| ATP-dependent DNA helicase [Rhodococcus equi 103S] gi|311888461|emb|CBH47773.1| putative ATP-dependent DNA helicase [Rhodococcus equi 103S] Length = 945 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 70/218 (32%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y ++ ++ S + Q+ N ++ + K+ Sbjct: 711 LYRAVVDDMLKKIKDTEGMQRKGAVLSALTRLKQVCNHPAHFLGDGSGVLRRGRHRSGKL 770 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQE 103 +E I++ + ++ F + G + ++ Sbjct: 771 ALVEDILDSVTADGERALLFTQFREFGDLVVPYLEERFGTDVPFLHGGVPKARRDRMVER 830 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + P++ + G GLNL N +V WW+ +E R + G + Sbjct: 831 FQGDDGPPVMLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQR 884 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V V L+ T++E + + K + DL + +K Sbjct: 885 RDVQVRKLVCVGTLEERIDAMISNKQELADLAIGTGEK 922 >gi|325673577|ref|ZP_08153268.1| SNF2 family superfamily II DNA/RNA helicase [Rhodococcus equi ATCC 33707] gi|325555598|gb|EGD25269.1| SNF2 family superfamily II DNA/RNA helicase [Rhodococcus equi ATCC 33707] Length = 945 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 70/218 (32%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y ++ ++ S + Q+ N ++ + K+ Sbjct: 711 LYRAVVDDMLKKIKDTEGMQRKGAVLSALTRLKQVCNHPAHFLGDGSGVLRRGRHRSGKL 770 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQE 103 +E I++ + ++ F + G + ++ Sbjct: 771 ALVEDILDSVTADGERALLFTQFREFGDLVVPYLEERFGTDVPFLHGGVPKARRDRMVER 830 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + P++ + G GLNL N +V WW+ +E R + G + Sbjct: 831 FQGDDGPPVMLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQR 884 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V V L+ T++E + + K + DL + +K Sbjct: 885 RDVQVRKLVCVGTLEERIDAMISNKQELADLAIGTGEK 922 >gi|330808509|ref|YP_004352971.1| Putative non-specific serine/threonine protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376617|gb|AEA67967.1| Putative non-specific serine/threonine protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 1096 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 77/206 (37%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDE--KIKALEV 61 R++ ++ + +K Q+ + + K + K+ +L Sbjct: 874 AMDRKVRDEIARSGVARSQIIILDALLKLRQVCCDLRLLNTVQTAKALRSGSGKLISLME 933 Query: 62 IIEK--ANAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 ++E+ + I++ F S L R + ++E+ GK+ L Sbjct: 934 MLEELLSEGRKILLFSQFTSMLSLIEEELQKRSLTYSLLTGSTTDRRTPVREFQSGKVSL 993 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ F WW+ +E R + G + VFVY LI Sbjct: 994 FLISLKAGGTGLNLTA-ADTVIHFDPWWNPA-----VENQATDRAYRIGQNKPVFVYKLI 1047 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + K+ + LL+ Sbjct: 1048 ARGTVEEKIQALQEDKAALAGSLLDG 1073 >gi|218233639|ref|YP_002366534.1| putative helicase [Bacillus cereus B4264] gi|218161596|gb|ACK61588.1| putative helicase [Bacillus cereus B4264] Length = 1064 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 AQ TI+E + + +K + ++ +++ Sbjct: 1020 AQGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|228903720|ref|ZP_04067840.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis IBL 4222] gi|228855988|gb|EEN00528.1| Helicase, SNF2/RAD54 [Bacillus thuringiensis IBL 4222] Length = 856 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEQFGQRVLFLNGSVPKKNRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|229109309|ref|ZP_04238907.1| Helicase, SWF/SNF [Bacillus cereus Rock1-15] gi|228674146|gb|EEL29392.1| Helicase, SWF/SNF [Bacillus cereus Rock1-15] Length = 1064 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 AQ TI+E + + +K + ++ +++ Sbjct: 1020 AQGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|229144464|ref|ZP_04272868.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST24] gi|228638999|gb|EEK95425.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST24] Length = 1064 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 AQ TI+E + + +K + ++ +++ Sbjct: 1020 AQGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|229150056|ref|ZP_04278279.1| Helicase, SWF/SNF [Bacillus cereus m1550] gi|228633355|gb|EEK89961.1| Helicase, SWF/SNF [Bacillus cereus m1550] Length = 1064 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 AQ TI+E + + +K + ++ +++ Sbjct: 1020 AQGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|51891795|ref|YP_074486.1| SNF2 family helicase [Symbiobacterium thermophilum IAM 14863] gi|51855484|dbj|BAD39642.1| SNF2 family helicase [Symbiobacterium thermophilum IAM 14863] Length = 989 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 60/208 (28%), Gaps = 22/208 (10%) Query: 3 QYHKFQRELY--CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +E + + Q+ N + KI L Sbjct: 764 LYEAIVQETLERAAQADGIQRQAAVLAGLTRLKQVCNHPAAATGDGPLVG-RSGKIDRLV 822 Query: 61 VIIEKA--NAAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 ++++ ++ F L G + + + G Sbjct: 823 QLLQEVLAAGEQALLFTQFARFGGRLQAYLAETLGCEVLFLHGGTPQPERDRLVARFQAG 882 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + PL + G GLNL + WW+ +E R + G R V V Sbjct: 883 EAPLFILSLKAGGLGLNLTA-ATHVFHVDRWWNPA-----VEDQATDRAYRIGQTRRVLV 936 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + LI T++E + + L K + ++ Sbjct: 937 HRLITAGTLEERIDRLLAEKRALAGQVI 964 >gi|94309439|ref|YP_582649.1| SNF2-like protein [Cupriavidus metallidurans CH34] gi|93353291|gb|ABF07380.1| Superfamily II DNA/RNA helicase, SNF2 family [Cupriavidus metallidurans CH34] Length = 1025 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 77/228 (33%), Gaps = 37/228 (16%) Query: 4 YHKFQRELYCDLQG----------------ENIEAFNSASKTVKCLQLANGAVYYDEEKH 47 Y +R+ + + E + ++ ++ + A + Sbjct: 789 YEALRRQALSEAERALLRPRKDKKAPAAMTEPEARIHVLAQLMRMRRAACDPRLVTPD-- 846 Query: 48 WKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLD 95 K++A + AN +V F L L++ Sbjct: 847 -VGQPGAKVRAFAELAATLAANGHKTLVFSQFVDFLQMLRQALVDAGLAWQYLDGATPAG 905 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + G+ + + G GLNL + +V WW+ E + R Sbjct: 906 ERTRRVAAFQAGEGDVFLISLKAGGFGLNLTA-ADYIVIADPWWNPAA-----EDQAMGR 959 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G +R V VY LIA TI+E ++ + K + D +L+A+ E I Sbjct: 960 AHRIGQQRPVTVYRLIAAGTIEERIVDLHQGKRALADGVLDAMDGEAI 1007 >gi|213964455|ref|ZP_03392655.1| SNF2/RAD54 family protein [Corynebacterium amycolatum SK46] gi|213952648|gb|EEB64030.1| SNF2/RAD54 family protein [Corynebacterium amycolatum SK46] Length = 1079 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 81/228 (35%), Gaps = 31/228 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFN-------SASKTVKCLQLANGAVYYDEEKHWKEVH--- 52 Y + +++ L+ +K Q+ N +Y + H Sbjct: 789 LYQEAVKDIEDKLKRSKRNRSGNFGRKSIILGGIMKLKQICNHPAHYQHDGSGLLNHGQH 848 Query: 53 -DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDP 98 K+ LE ++++ N +V F L F T + Sbjct: 849 RSGKVARLEELVDEIVQNGERALVFTQFVEFGKMLAPHFSKRLGVDIPFIQGAMTPAQRE 908 Query: 99 CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N P++ + G G+NL N ++ WW+ +E R Sbjct: 909 KVVAEFNAPDGPPIILLSTLAAGVGINLVA-ANHVIHIDRWWNPA-----VENQATDRSY 962 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G ++ V V+ L++ T++E + + + K+ + D ++ A + + + Sbjct: 963 RIGQRKDVHVHKLVSVGTLEERIDELIFEKAELADAVVRAGETKLTEM 1010 >gi|220907028|ref|YP_002482339.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 7425] gi|219863639|gb|ACL43978.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 7425] Length = 1112 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 29/216 (13%), Positives = 65/216 (30%), Gaps = 25/216 (11%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----KI 56 Y ++ + + K Q+ N + +++ K Sbjct: 876 LYEATVQDSLAAISAAAGIQRRGLILATLTKLKQICNHPAQLLRQTSLQDLPHRSGKLKR 935 Query: 57 KALEVIIEKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 + A ++ F L + + + Sbjct: 936 LEEMLEEALAEGDRALIFSQFAEMGKLLQLYLREQLGWETLFLSGSTPKPQREAMVDRFQ 995 Query: 106 EGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL N + F WW+ +E R + G KR Sbjct: 996 QDPQGPRIFILSLKAGGVGLNLTR-ANHVFHFDRWWNPA-----VENQATDRVFRIGQKR 1049 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ ++ T++E + ++L +K + + ++ A + Sbjct: 1050 NVQVHKFVSTGTLEEKIHEQLESKKALAEQVVGAGE 1085 >gi|88812636|ref|ZP_01127883.1| helicase, SNF2 family protein [Nitrococcus mobilis Nb-231] gi|88790052|gb|EAR21172.1| helicase, SNF2 family protein [Nitrococcus mobilis Nb-231] Length = 1171 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 76/215 (35%), Gaps = 23/215 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y RE +QGE+ + Q+ N Y + +H K + L Sbjct: 945 VYESVVREGLEVIQGESDTFQRQGLVLQMILALKQICNHPRQYLNDGATTPMHSGKAQRL 1004 Query: 60 EVIIEKAN--AAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 ++ + + ++V F R G + + ++ + Sbjct: 1005 LELLTETHRLHEKVLVFTQFRKAGELLQGWIAEAFGRTPAFLHGGLSRKQRDALVERFQG 1064 Query: 107 GKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNL + +V F LWW+ +E R + G + V Sbjct: 1065 ERTERVFILSLKAAGTGLNLTA-ASQVVHFDLWWNPA-----VEAQATDRAYRIGQSQTV 1118 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ LI + T +E + +R+K + +L + ++ Sbjct: 1119 QVHRLITRATFEERINAMIRSKRALSELTVGTGEQ 1153 >gi|118722509|gb|ABL09965.1| helicase [Streptomyces echinatus] Length = 1011 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 74/221 (33%), Gaps = 29/221 (13%) Query: 2 KQYHKFQRELYCD---LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DE 54 + Y E + L N + Q+ N + E+ Sbjct: 773 RLYRAALDEAFDTDDGLGSGIQRQGNVLRLLTRLKQICNHPAQFLGEEDTDAGRLAGRSG 832 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF------------PQGRTLDKDPCT 100 K++ ++ + + +V + L + G + Sbjct: 833 KLERATEMLGEVVASGERALVFTQYRVMGDLLARHLSGELGLARVPFLHGGTPTEHRDRM 892 Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + + PLL + G GLNL + ++ + WW+ +E R + Sbjct: 893 VRAFQEDDDAPPLLLISLKAGGFGLNLTR-ASHVMHYDRWWNPA-----VEDQATDRAHR 946 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V V+ L+ +T +E + L++K ++ D ++ A + Sbjct: 947 IGQTKTVLVHKLVTADTFEERIDALLQSKRSLADAVVGAGE 987 >gi|260434360|ref|ZP_05788330.1| superfamily II DNA/RNA helicase, SNF2 family [Synechococcus sp. WH 8109] gi|260412234|gb|EEX05530.1| superfamily II DNA/RNA helicase, SNF2 family [Synechococcus sp. WH 8109] Length = 1065 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 68/217 (31%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIK 57 Y K + + + + + Q+ N E + K++ Sbjct: 835 LYSKTVEDTLDAIARAPRGQRHGQVLALLTRLKQICNHPALAMSEGAVDDGFLGRSAKLQ 894 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEW 104 LE I+++ ++ F LQ G + + + Sbjct: 895 RLEEILDEVIEAGDRALLFTQFAEWGHLLQAWMQQRWKSEVPFLHGGTRKSERQAMVDRF 954 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E L + G GLNL + + WW+ +E R + G Sbjct: 955 QEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDRAYRIGQT 1008 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ I +++E + + +R KS + + ++ + + Sbjct: 1009 NRVMVHKFITSGSVEEKIDRMIREKSRLAEDVIGSGE 1045 >gi|163798146|ref|ZP_02192082.1| swf/snf family helicase [alpha proteobacterium BAL199] gi|159176589|gb|EDP61167.1| swf/snf family helicase [alpha proteobacterium BAL199] Length = 1381 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 25/212 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + A ++ + + D++ V K+ A Sbjct: 1163 YEALRRQSLDRLAAVDAPAGQRKIQILAEITRLRRACCNPALIDQDA---GVPSGKLAAF 1219 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 +++ N +V F + LA + + + G Sbjct: 1220 LDLVDDLVRNRHRALVFSQFVAHLALVRAALDARGIRYEYLDGSTPAADRERRVAAFQAG 1279 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + +V WW+ +E R + G +R V + Sbjct: 1280 TADVFLISLRAGGTGLNLTA-ADYVVHLDPWWNPA-----VEDQASDRAHRIGQERPVTI 1333 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y LI Q++I+E +L R K + +L + Sbjct: 1334 YRLIMQDSIEEQILHLHRDKRDLAAGILEGGE 1365 >gi|329904224|ref|ZP_08273705.1| DNA helicase, SNF2/RAD54 family [Oxalobacteraceae bacterium IMCC9480] gi|327548098|gb|EGF32821.1| DNA helicase, SNF2/RAD54 family [Oxalobacteraceae bacterium IMCC9480] Length = 1101 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 75/211 (35%), Gaps = 22/211 (10%) Query: 3 QYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y ++ + + + +K Q+ ++ K+ Sbjct: 872 LYEIVRTAMHDKVRAVIAEMGLARSHIVVLDALLKLRQVCCDPRLVKLDQATNVKESAKL 931 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNE 106 + L ++ +++ F LA + KA + ++ + E Sbjct: 932 ELLLSMLPDMIEEGRKVLLFSQFTGMLALVAKAVEKAGIPYVLLTGDTTDRATPVRRFQE 991 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++PL + G GLNL + ++ + WW+ E R + G ++ VF Sbjct: 992 GEVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAHRLGQEKPVF 1045 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI +I+E ++ K+ + + +L+ Sbjct: 1046 VYKLIVAGSIEEKIVALQDKKAALAEGILSE 1076 >gi|147676745|ref|YP_001210960.1| hypothetical protein PTH_0410 [Pelotomaculum thermopropionicum SI] gi|146272842|dbj|BAF58591.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 1256 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + ++ +++ Q+ N V+Y ++ + H K + Sbjct: 1030 LYRQVVEQVMEEIEHSEGITRKGLVFKLITSLKQICNHPVHYSKKGKPAKEHSGKAEKAL 1089 Query: 61 VIIEKAN--AAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNE- 106 ++ + ++ + L F G K ++++ E Sbjct: 1090 DLLAQIAAAGEKALIFTQYREMGELLVEMIREELQEEALFFHGGLPRQKRDEMVKKFQED 1149 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G P + + G GLNL ++ + LWW+ +E R + G R V Sbjct: 1150 KGAAPFMVVSLKAGGTGLNLTA-ATHVIHYDLWWNPA-----VEDQATDRTYRIGQTRTV 1203 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V+ LI+ T +E + + +K + L + A + Sbjct: 1204 MVHRLISLGTFEEKINTMMASKRELAGLTVAAGE 1237 >gi|78214026|ref|YP_382805.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9605] gi|78198485|gb|ABB36250.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9605] Length = 1065 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 69/217 (31%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIK 57 Y K + + + + + Q+ N E + K++ Sbjct: 835 LYSKTVEDTLDAIARAPRGQRHGQVLALLTRLKQICNHPALALSEGAVDDGFLGRSAKLQ 894 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEW 104 LE I+++ ++ F L+ G ++ + + Sbjct: 895 RLEEILDEVIEAGDRALLFTQFAEWGHLLRAWMQQRWKSEVPFLHGGTRKNERQAMVDRF 954 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E L + G GLNL + + WW+ +E R + G Sbjct: 955 QEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDRAYRIGQT 1008 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ I +++E + + +R KS + + ++ + + Sbjct: 1009 NRVMVHKFITSGSVEEKIDRMIREKSRLAEDVIGSGE 1045 >gi|329940611|ref|ZP_08289892.1| helicase [Streptomyces griseoaurantiacus M045] gi|329300672|gb|EGG44569.1| helicase [Streptomyces griseoaurantiacus M045] Length = 940 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 73/221 (33%), Gaps = 24/221 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y RE ++ A Q+ + Y +E K+ Sbjct: 710 LYEAVVRESMLAIETAEGMARRGMVLKLLTSLKQICDHPALYLKEDPATARALGERSGKL 769 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 L+ +++ +V + + G + + + + Sbjct: 770 ALLDELLDTLLSEDGSALVFTQYVGMARLITAHLAARAVPVDLLHGGTPVPERERMVDRF 829 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 EG P+L + G GLNL G+ +V WW+ +E R + G + Sbjct: 830 QEGATPVLVLSLKAAGTGLNLTRAGH-VVHVDRWWNPA-----VEEQATDRAYRIGQTQP 883 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V+ LI + T+++ + LR K + D +L + + + Sbjct: 884 VQVHRLITEGTVEDRIDDMLRAKRALADAILGSGETSLTEL 924 >gi|228920559|ref|ZP_04083904.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839189|gb|EEM84485.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 1064 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGNL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|284038229|ref|YP_003388159.1| SNF2-related protein [Spirosoma linguale DSM 74] gi|283817522|gb|ADB39360.1| SNF2-related protein [Spirosoma linguale DSM 74] Length = 1127 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 70/205 (34%), Gaps = 19/205 (9%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + R + +I + K Q+ N V ++ + + KI L Sbjct: 910 AYEQEFRNYLLSTKEGDIPRAKLHILQGLTKLRQICNAPVLLND-EEFYGNSSAKIDVLM 968 Query: 61 V-IIEKANAAPIIVAYHFNSDLA--------RLQKAFPQGRTLDKDPCTIQEWN-EGKIP 110 I K+ I+V F + L R + + + + + Sbjct: 969 EQIENKSPNHKILVFSQFVTMLDLIKKELEARQIGFEYLTGQTNDRQAIVNRFQTDASVR 1028 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + WW+ +E + R + G K+ V L Sbjct: 1029 VFLISLKAGGTGLNLTQ-ADYVYLVDPWWNPA-----VENQAIDRSYRIGQKKNVVAVRL 1082 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I NTI+E +L TK + D L+ Sbjct: 1083 ICPNTIEEKILLLQETKQELADKLV 1107 >gi|259907055|ref|YP_002647411.1| Putative helicase [Erwinia pyrifoliae Ep1/96] gi|224962677|emb|CAX54132.1| Putative helicase [Erwinia pyrifoliae Ep1/96] Length = 883 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 22/212 (10%) Query: 2 KQYHKFQR------ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + ++ +L QG +K Q+ + + K H K Sbjct: 659 ELYDQVRKAMQDRVQLAVQQQGAGRSHLLVLDALLKLRQICCDPRLLADARAEKVRHSAK 718 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWN 105 + L ++ A I++ F + L + + R ++ + Sbjct: 719 LALLREMLHDLLAEDRRILIFSQFTTMLTIIAGELQKARIPFVTLTGATRDRNEPVRSFQ 778 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G++P+ + G GLNL + ++ + WW+ E R + G + V Sbjct: 779 QGEVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAWRLGQDKPV 832 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 FVY LIA TI+E ++ + K+ + +L+ Sbjct: 833 FVYKLIAAGTIEEKIVALQQQKAELAGEILDD 864 >gi|148262677|ref|YP_001229383.1| non-specific serine/threonine protein kinase [Geobacter uraniireducens Rf4] gi|146396177|gb|ABQ24810.1| Non-specific serine/threonine protein kinase [Geobacter uraniireducens Rf4] Length = 898 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 72/215 (33%), Gaps = 23/215 (10%) Query: 2 KQYHKFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y + +E + Q S ++ Q+ N + + E K Sbjct: 666 RLYGQSVKELAEALREQQEGMKRRGLILSSLMRFKQICNHPGQALGDGDYAEERSGKFVR 725 Query: 59 LEVIIEKANAA--PIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 L + E+ + +++ F R G + + + + Sbjct: 726 LRELAEEIASRQEKVLIFTQFREMTAPIATFLATLFGRPGLVLHGGTPVAERKKLVDRFQ 785 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E P + G GLNL + ++ F WW+ +E R + G K+ Sbjct: 786 HEDGPPFFVLSLKAGGSGLNLTA-ASHVIHFDRWWNPA-----VENQATDRAFRIGQKKN 839 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ + + T++E + + KS + LL+ + Sbjct: 840 VMVHKFVCKGTVEEKIDALIAAKSGMATELLDGGE 874 >gi|308067420|ref|YP_003869025.1| Superfamily II DNA/RNA helicase, SNF2 family [Paenibacillus polymyxa E681] gi|305856699|gb|ADM68487.1| Superfamily II DNA/RNA helicase, SNF2 family [Paenibacillus polymyxa E681] Length = 1121 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 74/213 (34%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K Q E L E + + QL + E K Sbjct: 898 KLYTAYLAKLQHETLKHLNEEGFQKNRIKILAGLTRLRQLCCHPGLFIEGYT---GSSAK 954 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQE 103 + L II + + I++ F + L + + Sbjct: 955 FEQLLEIITECLSSGKRILIFSQFTTMLQMIGRELAREGVSYFYLDGQTPAPERVELCSR 1014 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ +E R + G K+ Sbjct: 1015 FNEGERELFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQATNRAHRMGQKK 1068 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+AQ T+++ + + + K + D ++ Sbjct: 1069 VVQVIRLVAQGTVEDKMYELQQKKKNMIDQVIQ 1101 >gi|309388673|gb|ADO76553.1| SNF2-related protein [Halanaerobium praevalens DSM 2228] Length = 1082 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 24/211 (11%) Query: 4 YHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y +L +L +G N N + K Q+ N EK + K++ Sbjct: 855 YQTVLADLRGELSQTVSDKGFNRSRINILAALTKLRQICNHPALILGEKA-STYNSGKLE 913 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNE 106 AL+ ++ + IIV F L ++ + G T + + N Sbjct: 914 ALKELLADALSGGHKIIVFSQFVKMLKLIRSELDQQGLNYLYLDGSTRKRMQKVKEFNNN 973 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ + + G GLNL +++V WW+ M+ER R + G + V Sbjct: 974 CEVKIFLISLKAGGVGLNLTA-ADMVVHVDPWWNP-----MVERQATDRAHRLGQQNRVM 1027 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + T++E +L+ K + + ++ Sbjct: 1028 VYKLITRGTVEEKMLKLQERKQDLFNNVIED 1058 >gi|291005462|ref|ZP_06563435.1| SNF2/RAD54 family helicase [Saccharopolyspora erythraea NRRL 2338] Length = 959 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 68/216 (31%), Gaps = 24/216 (11%) Query: 2 KQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y R + + + Q+ N ++ + K++ Sbjct: 728 ELYRATVRGMLDEQGMGEGIARRGRILKLLTALKQICNHPAHFLRQPGPLHGRSGKLERT 787 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKDPCTIQEWN 105 ++ + +V + G + + ++E+ Sbjct: 788 AEMLSEVVAAGDRALVFTQYRVMGELLAGHLAAELELPAVPFLHGGVSAARRSRMVEEFQ 847 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + P+L + G GLNL +V + WW+ +E R + G R Sbjct: 848 HSDDAAPVLVVSLKAGGTGLNLTR-ATHVVHYDRWWNPA-----VEDQATDRAHRIGQTR 901 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ L+ T++E + L K + D ++ + + Sbjct: 902 GVHVHKLVTHGTLEERIADLLDCKRGLADAVVGSGE 937 >gi|134099632|ref|YP_001105293.1| SNF2/RAD54 family helicase [Saccharopolyspora erythraea NRRL 2338] gi|133912255|emb|CAM02368.1| SNF2/RAD54 family helicase [Saccharopolyspora erythraea NRRL 2338] Length = 956 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 68/216 (31%), Gaps = 24/216 (11%) Query: 2 KQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y R + + + Q+ N ++ + K++ Sbjct: 725 ELYRATVRGMLDEQGMGEGIARRGRILKLLTALKQICNHPAHFLRQPGPLHGRSGKLERT 784 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKDPCTIQEWN 105 ++ + +V + G + + ++E+ Sbjct: 785 AEMLSEVVAAGDRALVFTQYRVMGELLAGHLAAELELPAVPFLHGGVSAARRSRMVEEFQ 844 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + P+L + G GLNL +V + WW+ +E R + G R Sbjct: 845 HSDDAAPVLVVSLKAGGTGLNLTR-ATHVVHYDRWWNPA-----VEDQATDRAHRIGQTR 898 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ L+ T++E + L K + D ++ + + Sbjct: 899 GVHVHKLVTHGTLEERIADLLDCKRGLADAVVGSGE 934 >gi|158333854|ref|YP_001515026.1| SNF2 family helicase putative [Acaryochloris marina MBIC11017] gi|158304095|gb|ABW25712.1| helicase, SNF2 family, putative [Acaryochloris marina MBIC11017] Length = 1060 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 72/215 (33%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y +E+ D+ S +K Q+ N + +E + K+ L Sbjct: 828 LYEAVVKEISKDIDEVDGIQRKGMILSTLLKLKQICNHPRQFLQDESDFTPERSHKLSRL 887 Query: 60 EVIIEK--ANAAPIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTIQEWNE 106 +I + ++V F G +K I E+ + Sbjct: 888 TEMITEVMEEGESLLVFTQFTELGDALEKYLRQTHHYTTYYIHGGTNRNKREQMITEFQD 947 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+ L N + F WW+ +E R + G K+ Sbjct: 948 PETGPSVFILSLKAGGVGITLTK-ANHVFHFDRWWNPA-----VEDQATDRAFRIGQKKN 1001 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VFV+ +A T++E + + + K + ++ + + Sbjct: 1002 VFVHKFVAIGTLEERIDEMIEDKKKLAGAIVGSDE 1036 >gi|310766267|gb|ADP11217.1| SWI/SNF-like matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia sp. Ejp617] Length = 852 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 22/212 (10%) Query: 2 KQYHKFQR------ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + ++ +L QG +K Q+ + + K H K Sbjct: 628 ELYDQVRKAMQDRVQLAVQQQGAGRSHLLVLDALLKLRQICCDPRLLADARAEKVRHSAK 687 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWN 105 + L ++ A I++ F + L + + R ++ + Sbjct: 688 LALLREMLHDLLAEDRRILIFSQFTTMLTIIAGELQKARIPFVTLTGATRDRNEPVRSFQ 747 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G++P+ + G GLNL + ++ + WW+ E R + G + V Sbjct: 748 QGEVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAWRLGQDKPV 801 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 FVY LIA TI+E ++ + K+ + +L+ Sbjct: 802 FVYKLIAAGTIEEKIVALQQQKAELAGEILDD 833 >gi|297195014|ref|ZP_06912412.1| helicase [Streptomyces pristinaespiralis ATCC 25486] gi|297152588|gb|EDY65843.2| helicase [Streptomyces pristinaespiralis ATCC 25486] Length = 969 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 46/243 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYDEE-------KHWKEVH- 52 Y RE ++ A Q+ N + +E W E Sbjct: 718 LYEAVVRETMAAIEAAEGIARRGLVMKLLTALKQICNHPAQFLKESGGGRGAGAWSEGDS 777 Query: 53 ------------------DEKIKALEVIIEK--ANAAPIIVAYHFNSD----------LA 82 K+ L+ ++E + ++V + S A Sbjct: 778 RSGARSGSGGASVRLAGRSGKLALLDELLETILSEDGSVLVFTQYVSMARLLSAHLTSRA 837 Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + G + + + + G++P+ + G GLNL G+ ++ + WW+ Sbjct: 838 IPSQLLHGGTPITERERMVDRFQSGEVPVFILSLKAAGTGLNLTRAGH-VIHYDRWWNPA 896 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +E R + G + V V+ L+ + T+++ + + L +K + D +L + + Sbjct: 897 -----VEEQATDRAYRIGQTQPVQVHRLVTEGTVEDRIAEMLASKRALADAVLGSGEAAL 951 Query: 203 IHV 205 + Sbjct: 952 TEL 954 >gi|256617084|ref|ZP_05473930.1| phage-associated helicase [Enterococcus faecalis ATCC 4200] gi|257088353|ref|ZP_05582714.1| phage-associated helicase [Enterococcus faecalis D6] gi|256596611|gb|EEU15787.1| phage-associated helicase [Enterococcus faecalis ATCC 4200] gi|256996383|gb|EEU83685.1| phage-associated helicase [Enterococcus faecalis D6] Length = 451 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 83/198 (41%), Positives = 120/198 (60%), Gaps = 8/198 (4%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y KF+ +L L+ +I+A N+A + K LQ+ANGA+ YDE +HD+K+ ALE +I Sbjct: 256 YDKFKADLVLQLKDADIDAANAAVLSNKLLQMANGAI-YDEFNVSHHIHDQKLDALEDLI 314 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 E AN I++AY F DL R+++ F K I+EWN+G IP+ HPAS GHGL Sbjct: 315 EGANGKSILIAYWFQHDLERIKERFK--VRQIKTAKDIEEWNKGNIPIGVIHPASAGHGL 372 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ GG+ LV+F L W LE +QQ R+ + G V ++++IA++TIDE V+ Sbjct: 373 NLQAGGSTLVWFGLTWSLELYQQTNARLW-----RQGQNETVVIHHIIAKDTIDEDVMLA 427 Query: 184 LRTKSTIQDLLLNALKKE 201 L+ K Q L++A+K Sbjct: 428 LKLKDKTQASLIDAVKAR 445 >gi|224367136|ref|YP_002601299.1| SWI/SNF helicase family protein [Desulfobacterium autotrophicum HRM2] gi|223689852|gb|ACN13135.1| SWI/SNF helicase family protein [Desulfobacterium autotrophicum HRM2] Length = 1392 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 66/209 (31%), Gaps = 25/209 (11%) Query: 3 QYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + +++ ++ K QL + K+K Sbjct: 1171 LYEAHRLKAVENIEAAEDTPGQKHLRILAELTKLRQLCCNPSLVLPGTK---ITSSKLKV 1227 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNE 106 ++++ N +V F L + + I + Sbjct: 1228 FGDMVDELLENNHKALVFSQFVGHLAILKKFLDAKKISYQYLDGSTRAGQRRERINAFQS 1287 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G L + G GLNL + ++ WW+ +E R + G R V Sbjct: 1288 GVGELFLISLKAGGFGLNLTA-ADYVIHMDPWWNPA-----VEDQASDRAYRIGQTRPVT 1341 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+ + +I+E +L R K + + LL Sbjct: 1342 VYRLVVKGSIEERILDLHREKRDLAESLL 1370 >gi|308067308|ref|YP_003868913.1| Superfamily II DNA/RNA helicase, SNF2 family [Paenibacillus polymyxa E681] gi|305856587|gb|ADM68375.1| Superfamily II DNA/RNA helicase, SNF2 family [Paenibacillus polymyxa E681] Length = 1041 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 74/215 (34%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y +L L G+ A K Q+ + + + K++ Sbjct: 809 LYRGVVDQLLGTLDGQIGMARKGLVLSSLTKLKQICDHPGLIIPGRADSGKTENSGKMER 868 Query: 59 LEVII--EKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 L ++ + N ++ + S G + + + Sbjct: 869 LLELVETIRENGESALIFTQYVSMGELLVSRLAKIFGEEPYFLHGGLAKTRRDEMVHNFQ 928 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +G+ P + + G GLNL + ++ + WW+ +E R + G R Sbjct: 929 QGEGPNIFVLSLRAGGVGLNLTR-ASHVIHYDRWWNPA-----VENQATDRVFRIGQSRN 982 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ LI Q T++E + + + +K + + ++ + + Sbjct: 983 VQVHKLICQGTLEERIDELIESKKALSEQVVGSGE 1017 >gi|262374572|ref|ZP_06067846.1| predicted protein [Acinetobacter junii SH205] gi|262310568|gb|EEY91658.1| predicted protein [Acinetobacter junii SH205] Length = 1115 Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 2 KQYHKFQ---RELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYD-EEKHWKEVHDE 54 K Y + +E + +G +K Q+ + + H Sbjct: 889 KLYEAVRATMQENIQKIVAEKGFKRSQIQILDALLKLRQVCCHPSLLKLDSVKTGQAHSA 948 Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEW 104 K++ L ++ I++ F S L +++ K I + Sbjct: 949 KLEQLMDMVVPMVEEGRKILIFSQFTSMLELIEQQLHHAEIGYVKLTGKTKKRDEVITAF 1008 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G++P+ + G GLNL + ++ + WW+ E R + G + Sbjct: 1009 QSGQVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----EDQASDRAWRIGQDKP 1062 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFVY LI +I+E +L + K+ + +L+ Sbjct: 1063 VFVYKLITNKSIEEKILALQQNKAELAQSILS 1094 >gi|283476853|emb|CAY72692.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia pyrifoliae DSM 12163] Length = 852 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 22/212 (10%) Query: 2 KQYHKFQR------ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + ++ +L QG +K Q+ + + K H K Sbjct: 628 ELYDQVRKAMQDRVQLAVQQQGAGRSHLLVLDALLKLRQICCDPRLLADARAEKVRHSAK 687 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWN 105 + L ++ A I++ F + L + + R ++ + Sbjct: 688 LALLREMLHDLLAEDRRILIFSQFTTMLTIIAGELQKARIPFVTLTGATRDRNEPVRSFQ 747 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G++P+ + G GLNL + ++ + WW+ E R + G + V Sbjct: 748 QGEVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAWRLGQDKPV 801 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 FVY LIA TI+E ++ + K+ + +L+ Sbjct: 802 FVYKLIAAGTIEEKIVALQQQKAELAGEILDD 833 >gi|253798840|ref|YP_003031841.1| helicase helZ [Mycobacterium tuberculosis KZN 1435] gi|297634684|ref|ZP_06952464.1| helicase helZ [Mycobacterium tuberculosis KZN 4207] gi|297731672|ref|ZP_06960790.1| helicase helZ [Mycobacterium tuberculosis KZN R506] gi|313659007|ref|ZP_07815887.1| helicase helZ [Mycobacterium tuberculosis KZN V2475] gi|253320343|gb|ACT24946.1| helicase helZ [Mycobacterium tuberculosis KZN 1435] gi|328458599|gb|AEB04022.1| helicase helZ [Mycobacterium tuberculosis KZN 4207] Length = 849 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 616 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 675 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 676 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 735 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 736 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 789 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 790 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 821 >gi|215446324|ref|ZP_03433076.1| Snf2/Rad54 family helicase [Mycobacterium tuberculosis T85] Length = 547 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 314 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 373 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 374 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 433 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 434 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 487 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 488 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 519 >gi|329922954|ref|ZP_08278470.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] gi|328941727|gb|EGG38012.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] Length = 1111 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K ++E L G + + Q+ + + E K Sbjct: 886 KLYTAYLAKLRQETLKHLAQDGFQKNRIRILAGITRLRQICCHPALFVDGY---EGGSAK 942 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQE 103 ++ L IE+ ++V F L + + Sbjct: 943 LEQLLETIEECRLAGRRMLVFSQFTGMLNLIAGELGYRGIPFFYLDGQTPGSERVELCER 1002 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ + + G GLNL G + ++ + LWW+ Q + R + G K+ Sbjct: 1003 FNEGEREVFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAMDRAHRIGQKK 1056 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V +AQ+TI++ ++ + K + + L+ Sbjct: 1057 VVQVIRFVAQDTIEDKMVALQQKKKDLIEELVQ 1089 >gi|215431026|ref|ZP_03428945.1| helicase helZ [Mycobacterium tuberculosis EAS054] gi|289754211|ref|ZP_06513589.1| helicase helZ [Mycobacterium tuberculosis EAS054] gi|289694798|gb|EFD62227.1| helicase helZ [Mycobacterium tuberculosis EAS054] Length = 1013 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 840 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 899 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 900 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 953 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 954 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 985 >gi|306780129|ref|ZP_07418466.1| helicase helZ [Mycobacterium tuberculosis SUMu002] gi|306789239|ref|ZP_07427561.1| helicase helZ [Mycobacterium tuberculosis SUMu004] gi|306793568|ref|ZP_07431870.1| helicase helZ [Mycobacterium tuberculosis SUMu005] gi|308326957|gb|EFP15808.1| helicase helZ [Mycobacterium tuberculosis SUMu002] gi|308334225|gb|EFP23076.1| helicase helZ [Mycobacterium tuberculosis SUMu004] gi|308338024|gb|EFP26875.1| helicase helZ [Mycobacterium tuberculosis SUMu005] Length = 1013 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 840 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 899 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 900 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 953 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 954 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 985 >gi|289554116|ref|ZP_06443326.1| LOW QUALITY PROTEIN: helicase helZ [Mycobacterium tuberculosis KZN 605] gi|289438748|gb|EFD21241.1| LOW QUALITY PROTEIN: helicase helZ [Mycobacterium tuberculosis KZN 605] Length = 911 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 678 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 737 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 738 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 797 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 798 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 851 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 852 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 883 >gi|237804906|ref|YP_002889060.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis B/TZ1A828/OT] gi|231273206|emb|CAX10119.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis B/TZ1A828/OT] Length = 1199 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 89/223 (39%), Gaps = 25/223 (11%) Query: 2 KQYH-KFQREL--YCDLQGEN----IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHD 53 + Y ++E L+ E + + + + Q+ N VY+ + + +K Sbjct: 954 QLYSSTLKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICNHPAVYFKDPESYKNHSS 1013 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQ 102 K A ++ + + ++V + + + + A +G++ ++ + Sbjct: 1014 GKWAAFVKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVRGKSQNRKEEIDR 1073 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1074 FSNDPNCRVFIGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQK 1127 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + + + +HV Sbjct: 1128 NTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|15609238|ref|NP_216617.1| helicase HelZ [Mycobacterium tuberculosis H37Rv] gi|2909552|emb|CAA17284.1| PROBABLE HELICASE HELZ [Mycobacterium tuberculosis H37Rv] Length = 1013 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 840 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 899 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 900 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 953 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 954 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 985 >gi|76789292|ref|YP_328378.1| SWF/SNF family helicase [Chlamydia trachomatis A/HAR-13] gi|237802984|ref|YP_002888178.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis B/Jali20/OT] gi|76167822|gb|AAX50830.1| SWF/SNF family helicase [Chlamydia trachomatis A/HAR-13] gi|231274218|emb|CAX11012.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis B/Jali20/OT] Length = 1199 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 89/223 (39%), Gaps = 25/223 (11%) Query: 2 KQYH-KFQREL--YCDLQGEN----IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHD 53 + Y ++E L+ E + + + + Q+ N VY+ + + +K Sbjct: 954 QLYSSTLKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICNHPAVYFKDPESYKNHSS 1013 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQ 102 K A ++ + + ++V + + + + A +G++ ++ + Sbjct: 1014 GKWAAFVKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVRGKSQNRKEEIDR 1073 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1074 FSNDPNCRVFIGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQK 1127 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + + + +HV Sbjct: 1128 NTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|15841592|ref|NP_336629.1| Snf2/Rad54 family helicase [Mycobacterium tuberculosis CDC1551] gi|13881841|gb|AAK46443.1| helicase, SNF2/RAD54 family [Mycobacterium tuberculosis CDC1551] Length = 954 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 721 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 780 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 781 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 840 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 841 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 894 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 895 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 926 >gi|31793283|ref|NP_855776.1| helicase HelZ [Mycobacterium bovis AF2122/97] gi|121637985|ref|YP_978209.1| putative helicase helZ [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990479|ref|YP_002645166.1| putative helicase [Mycobacterium bovis BCG str. Tokyo 172] gi|31618875|emb|CAD96980.1| PROBABLE HELICASE HELZ [Mycobacterium bovis AF2122/97] gi|121493633|emb|CAL72108.1| Probable helicase helZ [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773592|dbj|BAH26398.1| putative helicase [Mycobacterium bovis BCG str. Tokyo 172] Length = 1013 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 840 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 899 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 900 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 953 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 954 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 985 >gi|148823314|ref|YP_001288068.1| helicase helZ [Mycobacterium tuberculosis F11] gi|215403485|ref|ZP_03415666.1| putative helicase helZ [Mycobacterium tuberculosis 02_1987] gi|215411805|ref|ZP_03420597.1| putative helicase helZ [Mycobacterium tuberculosis 94_M4241A] gi|254232263|ref|ZP_04925590.1| helicase helZ [Mycobacterium tuberculosis C] gi|254551134|ref|ZP_05141581.1| putative helicase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260205390|ref|ZP_05772881.1| putative helicase [Mycobacterium tuberculosis K85] gi|289574781|ref|ZP_06455008.1| helicase helZ [Mycobacterium tuberculosis K85] gi|289745376|ref|ZP_06504754.1| helicase helZ [Mycobacterium tuberculosis 02_1987] gi|294997044|ref|ZP_06802735.1| putative helicase [Mycobacterium tuberculosis 210] gi|298525599|ref|ZP_07013008.1| helicase helZ [Mycobacterium tuberculosis 94_M4241A] gi|306784872|ref|ZP_07423194.1| helicase helZ [Mycobacterium tuberculosis SUMu003] gi|306797957|ref|ZP_07436259.1| helicase helZ [Mycobacterium tuberculosis SUMu006] gi|306803836|ref|ZP_07440504.1| helicase helZ [Mycobacterium tuberculosis SUMu008] gi|306808409|ref|ZP_07445077.1| helicase helZ [Mycobacterium tuberculosis SUMu007] gi|306968232|ref|ZP_07480893.1| helicase helZ [Mycobacterium tuberculosis SUMu009] gi|124601322|gb|EAY60332.1| helicase helZ [Mycobacterium tuberculosis C] gi|148721841|gb|ABR06466.1| helicase helZ [Mycobacterium tuberculosis F11] gi|289539212|gb|EFD43790.1| helicase helZ [Mycobacterium tuberculosis K85] gi|289685904|gb|EFD53392.1| helicase helZ [Mycobacterium tuberculosis 02_1987] gi|298495393|gb|EFI30687.1| helicase helZ [Mycobacterium tuberculosis 94_M4241A] gi|308330390|gb|EFP19241.1| helicase helZ [Mycobacterium tuberculosis SUMu003] gi|308341711|gb|EFP30562.1| helicase helZ [Mycobacterium tuberculosis SUMu006] gi|308345201|gb|EFP34052.1| helicase helZ [Mycobacterium tuberculosis SUMu007] gi|308349504|gb|EFP38355.1| helicase helZ [Mycobacterium tuberculosis SUMu008] gi|308354134|gb|EFP42985.1| helicase helZ [Mycobacterium tuberculosis SUMu009] gi|323719315|gb|EGB28456.1| helicase helZ [Mycobacterium tuberculosis CDC1551A] gi|326903713|gb|EGE50646.1| helicase helZ [Mycobacterium tuberculosis W-148] Length = 1013 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 840 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 899 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 900 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 953 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 954 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 985 >gi|311742708|ref|ZP_07716517.1| helicase [Aeromicrobium marinum DSM 15272] gi|311314336|gb|EFQ84244.1| helicase [Aeromicrobium marinum DSM 15272] Length = 717 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 69/209 (33%), Gaps = 25/209 (11%) Query: 2 KQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + ++ + +C Q+ + + K+ L Sbjct: 498 RLYEQTVAAGMQRVRESTSMQRRGQVLALITRCKQVCDHPALVEHRGA-----SAKLDVL 552 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEG 107 + +++ +V + L + + + + E+ G Sbjct: 553 DDLVDTIVAEDGRALVFTQYVRMGELLVDHWTEREVSHRFLHGSLPVGQRQRMVDEFQAG 612 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +P+L + G GLNL + ++ + WW+ +E R + G + V V Sbjct: 613 DLPVLLLSLRAGGTGLNLTA-ADHVIHYDRWWNPA-----VEDQATDRAHRIGQTKPVQV 666 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + L T+++ + + K + D ++N Sbjct: 667 HRLTVGGTVEDGIADLIERKRALADAVIN 695 >gi|260187090|ref|ZP_05764564.1| putative helicase [Mycobacterium tuberculosis CPHL_A] gi|289447722|ref|ZP_06437466.1| helicase helZ [Mycobacterium tuberculosis CPHL_A] gi|289420680|gb|EFD17881.1| helicase helZ [Mycobacterium tuberculosis CPHL_A] Length = 1014 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 781 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 840 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 841 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 900 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 901 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 954 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 955 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 986 >gi|148661915|ref|YP_001283438.1| putative helicase HelZ [Mycobacterium tuberculosis H37Ra] gi|306776343|ref|ZP_07414680.1| helicase helZ [Mycobacterium tuberculosis SUMu001] gi|306972457|ref|ZP_07485118.1| helicase helZ [Mycobacterium tuberculosis SUMu010] gi|307080168|ref|ZP_07489338.1| helicase helZ [Mycobacterium tuberculosis SUMu011] gi|307084748|ref|ZP_07493861.1| helicase helZ [Mycobacterium tuberculosis SUMu012] gi|148506067|gb|ABQ73876.1| putative helicase HelZ [Mycobacterium tuberculosis H37Ra] gi|308215227|gb|EFO74626.1| helicase helZ [Mycobacterium tuberculosis SUMu001] gi|308358097|gb|EFP46948.1| helicase helZ [Mycobacterium tuberculosis SUMu010] gi|308362031|gb|EFP50882.1| helicase helZ [Mycobacterium tuberculosis SUMu011] gi|308365678|gb|EFP54529.1| helicase helZ [Mycobacterium tuberculosis SUMu012] Length = 1013 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 840 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 899 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 900 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 953 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 954 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 985 >gi|303240851|ref|ZP_07327363.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] gi|302591579|gb|EFL61315.1| SNF2-related protein [Acetivibrio cellulolyticus CD2] Length = 969 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 73/206 (35%), Gaps = 23/206 (11%) Query: 4 YHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y F+ EL ++ IE + + + Q+ + ++ K++ Sbjct: 753 YKSFKEELIPKIEEFGIEKNHIEILAALTRLRQICAHPATFLDDYT---GGSGKLELAMD 809 Query: 62 IIEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKI 109 II + + I+V F L + ++ I +N + Sbjct: 810 IIIQSIDSGHSILVFSQFTKMLKIIRNELENSGINYYYLDGSMKPEERMMEIDNFNSDRE 869 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL ++++ F WW+ +E R + G K V VY Sbjct: 870 AVFLISLKAGGTGLNLTK-ADVIIHFDPWWNPA-----VEDQASDRAHRMGQKNVVQVYK 923 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 L+ + TI+E + K + + ++ Sbjct: 924 LLTEGTIEEKIANLQDRKRDLIESII 949 >gi|291520743|emb|CBK79036.1| Superfamily II DNA/RNA helicases, SNF2 family [Coprococcus catus GD/7] Length = 1096 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 79/221 (35%), Gaps = 30/221 (13%) Query: 6 KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + Q+EL ++ K QL + H K+ +I+ Sbjct: 883 QLQKELESQNDSMFKASKIQILAELTKLRQLCCDPALIYKNYH---GGSAKLDTCIQLIQ 939 Query: 65 --KANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 +A I++ F S L L ++ + +NE IP+ Sbjct: 940 NARAGGHKILLFSQFTSMLDIIEHRLKLEHILYYRLDGSTKSEQRTRLVNAFNENAIPVF 999 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G +I++ + WW+ R + G V VY LIA Sbjct: 1000 LISLKAGGTGLNLT-GADIVIHYDPWWNAAAQ-----NQATDRAHRIGQTHTVTVYKLIA 1053 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA--------LKKETIHV 205 ++TI+E +L+ K + D +L+ K+E + + Sbjct: 1054 RHTIEEKILELQENKKALSDQILSEEGVTASQLTKEELLQI 1094 >gi|229087719|ref|ZP_04219842.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-44] gi|228695554|gb|EEL48416.1| Helicase, SNF2/RAD54 [Bacillus cereus Rock3-44] Length = 858 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ ++ K + Sbjct: 635 LYEQLVQDTLQNIEGLTGIERRGFILLMLNKLKQICNHPALYLKEETPIDIVQRSMKTQT 694 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + LQK + I+++ Sbjct: 695 LMDLIENIKDQNESCLIFTQYIGMGNMLQKILEEKFGQRVLFLNGSVPKAERDKMIEQFQ 754 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 755 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 808 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ ++ + Sbjct: 809 HVHKLITTGTLEEKIDEMLERKQSLSSAIITS 840 >gi|159027170|emb|CAO86802.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1020 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 70/216 (32%), Gaps = 24/216 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKA 58 + Y + ++ + + ++ Q+ N ++ E K+ Sbjct: 782 QLYQQLVETTLQKIEETQGIQRHGLILTLLMQLKQICNHPAHFLKENSLETSQRSGKLLR 841 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 LE ++E+ ++ F LQ + I+ + Sbjct: 842 LEAMVEEVIAEGDRALIFTQFAEWGKLLQTHLQKKLAEEILFLSGSTKTKDRVEMIERFQ 901 Query: 106 EGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL N + WW+ +E R + G KR Sbjct: 902 NDPQGPKIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPA-----VENQATDRAFRIGQKR 955 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ I T++E + + + +K + + ++A + Sbjct: 956 NVQVHKFICTGTLEERINEMIESKKQLAEQTVDAGE 991 >gi|228999987|ref|ZP_04159559.1| Helicase, SNF2/RAD54 [Bacillus mycoides Rock3-17] gi|228759929|gb|EEM08903.1| Helicase, SNF2/RAD54 [Bacillus mycoides Rock3-17] Length = 867 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 76/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ K++ K + Sbjct: 644 LYEQLVQDTLQNIEGLTGIERRGFILMMLSKLKQICNHPALYLKEEAPKDIVQRSMKTQT 703 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + LQK + I+++ Sbjct: 704 LMDLIENIKDQNESCLIFTQYIGMGNMLQKILEEKFGQRVLFLNGSVPKIERDKMIEQFQ 763 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 764 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 817 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ ++ + Sbjct: 818 HVHKLITTGTLEEKIDEMLERKQSLSSAIITS 849 >gi|300869843|ref|YP_003784714.1| HepA Superfamily II D R helicase [Brachyspira pilosicoli 95/1000] gi|300687542|gb|ADK30213.1| HepA Superfamily II D R helicases SNF2 family [Brachyspira pilosicoli 95/1000] Length = 1005 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 72/215 (33%), Gaps = 22/215 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ + +R+ + S + Q+ ++ K Sbjct: 793 IEIFETVKRKGFAQ------SHIEIFSALTRLRQVCCHPRLMHQDLRGDSHTSGKFNMFI 846 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGKIP 110 +I + + ++V F L ++ T + +N G+ P Sbjct: 847 EMIREAISGGHSVLVFSSFTRMLNIMRDAFNKLNINYLYLDGTTKNRMDLVHRFNAGEAP 906 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GL L + ++ + LWW+ +E R + G KR V Y L Sbjct: 907 IFLLSLKAAGTGLTLTQ-ADTVIHYDLWWNPA-----VEDQATDRAYRIGQKRVVTNYKL 960 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + + TI+E +L+ K + D ++ + + Sbjct: 961 VTRGTIEEKILELQNKKRVLIDTVVGDSMGDINKL 995 >gi|296436088|gb|ADH18262.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis G/9768] gi|296437949|gb|ADH20110.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis G/11074] gi|297140449|gb|ADH97207.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis G/9301] Length = 1199 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 89/223 (39%), Gaps = 25/223 (11%) Query: 2 KQYH-KFQREL--YCDLQGEN----IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHD 53 + Y ++E L+ E + + + + Q+ N VY+ + + +K Sbjct: 954 QLYSSTLKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICNHPAVYFKDPESYKNHSS 1013 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQ 102 K A ++ + + ++V + + + + A +G++ ++ + Sbjct: 1014 GKWAAFVKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVRGKSQNRKEEIDR 1073 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1074 FSNDPNCRVFIGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQK 1127 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + + + +HV Sbjct: 1128 NTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|196033339|ref|ZP_03100751.1| putative helicase [Bacillus cereus W] gi|195993773|gb|EDX57729.1| putative helicase [Bacillus cereus W] Length = 1064 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|289758218|ref|ZP_06517596.1| superfamily II DNA/RNA helicase [Mycobacterium tuberculosis T85] gi|289713782|gb|EFD77794.1| superfamily II DNA/RNA helicase [Mycobacterium tuberculosis T85] Length = 545 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 312 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 371 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 372 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 431 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 432 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 485 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 486 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 517 >gi|282899415|ref|ZP_06307382.1| SNF2-related helicase [Cylindrospermopsis raciborskii CS-505] gi|281195679|gb|EFA70609.1| SNF2-related helicase [Cylindrospermopsis raciborskii CS-505] Length = 1081 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 78/216 (36%), Gaps = 23/216 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + ++Q + S VK Q+ N Y E ++ K++ L Sbjct: 845 ELYQNAVDKSLSEIQSASGLQRRGMILSLLVKLKQICNHPAQYLHESSLEKYSSAKLQRL 904 Query: 60 EVIIEK--ANAAPIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTIQEWNE 106 + ++E+ A + ++ F L R + + + + Sbjct: 905 QEMLEEVIAEKSRALIFTQFAELGKLLQPYLAKHLDREIFFLYGTTGKKQREEMVDRFQQ 964 Query: 107 GK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P++ + G GLNL N + F WW+ +E R + G + Sbjct: 965 DPQGPPIMILSLKAGGVGLNLTR-ANYVFHFDRWWNPA-----VENQATDRAFRIGQTQN 1018 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ + + T++E + + +K + ++++ ++ Sbjct: 1019 VQVHKFVCRGTLEEKIHDMIESKKQLAQQVISSGEE 1054 >gi|255311373|ref|ZP_05353943.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis 6276] gi|255317674|ref|ZP_05358920.1| putative helicase (SWF/SNF family) protein [Chlamydia trachomatis 6276s] Length = 1199 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 89/223 (39%), Gaps = 25/223 (11%) Query: 2 KQYH-KFQREL--YCDLQGEN----IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHD 53 + Y ++E L+ E + + + + Q+ N VY+ + + +K Sbjct: 954 QLYSSTLKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICNHPAVYFKDPESYKNHSS 1013 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQ 102 K A ++ + + ++V + + + + A +G++ ++ + Sbjct: 1014 GKWAAFVKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVRGKSQNRKEEIDR 1073 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1074 FSNDPNCRVFIGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQK 1127 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + + + +HV Sbjct: 1128 NTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|228933137|ref|ZP_04095994.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826494|gb|EEM72270.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 1064 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|229090820|ref|ZP_04222049.1| Helicase, SWF/SNF [Bacillus cereus Rock3-42] gi|228692523|gb|EEL46253.1| Helicase, SWF/SNF [Bacillus cereus Rock3-42] Length = 1064 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|229130493|ref|ZP_04259449.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-Cer4] gi|228652832|gb|EEL08714.1| Helicase, SNF2/RAD54 [Bacillus cereus BDRD-Cer4] Length = 856 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 633 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 692 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 693 LIELIENIKDQNESCLIFTQYIGMGNMLKRVLEEKFGQRVLFLNGSVPKKDRDKMIEEFQ 752 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 753 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 806 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ + ++ + Sbjct: 807 HVHKLITTGTLEEKIDEMLERKQSLNNAVITS 838 >gi|49481102|ref|YP_035985.1| SWF/SNF family helicase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49332658|gb|AAT63304.1| helicase, SWF/SNF family [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 1064 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|295102130|emb|CBK99675.1| Superfamily II DNA/RNA helicases, SNF2 family [Faecalibacterium prausnitzii L2-6] Length = 1109 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 22/206 (10%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + LQ + + + ++ ++ + E K+ A Sbjct: 888 KLYLAAVVDAREKLQAAKPEDKMAVFAVLMRLREICCDPRLIADN---WEGGSAKLDACA 944 Query: 61 VIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ I++ F S L ++ +N G+ Sbjct: 945 ELVSSAVEGGHRILLFSQFTSMLELLAKRLDAEGISHFTLQGSTPKPVRAELVRRFNGGE 1004 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL +I++ + WW++ R + G + V VY Sbjct: 1005 VSVFLISLRAGGTGLNLTA-ADIVIHYDPWWNVAAQ-----NQATDRAYRIGQQNPVQVY 1058 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLL 194 LIAQ+TI+E +++ + K ++ D + Sbjct: 1059 KLIAQDTIEEKIVELQQAKQSLADTV 1084 >gi|229008128|ref|ZP_04165659.1| Helicase, SNF2/RAD54 [Bacillus mycoides Rock1-4] gi|228753134|gb|EEM02641.1| Helicase, SNF2/RAD54 [Bacillus mycoides Rock1-4] Length = 867 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 76/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ K++ K + Sbjct: 644 LYEQLVQDTLQNIEGLTGIERRGFILMMLSKLKQICNHPALYLKEEAPKDIVQRSMKTQT 703 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + LQK + I+++ Sbjct: 704 LMDLIENIKDQNESCLIFTQYIGMGNMLQKILEEKFGQRVLFLNGSVPKIERDKMIEQFQ 763 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 764 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 817 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ ++ + Sbjct: 818 HVHKLITTGTLEEKIDEMLERKQSLSSAIITS 849 >gi|156743267|ref|YP_001433396.1| non-specific serine/threonine protein kinase [Roseiflexus castenholzii DSM 13941] gi|156234595|gb|ABU59378.1| Non-specific serine/threonine protein kinase [Roseiflexus castenholzii DSM 13941] Length = 1066 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 71/207 (34%), Gaps = 25/207 (12%) Query: 4 YHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y L + E I ++ Q+ N D K + L Sbjct: 854 YRAL---LLGLIDNEGINKARIKVLEGLLRLRQICNHPRLVD---ASFRGSSGKFELLLE 907 Query: 62 IIEKAN--AAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIP 110 +E N ++ F L ++ A+ G+T + + N+ +P Sbjct: 908 TLETLNAEGHKALIFSQFVQMLHLIREALDTRSIRYAYLDGQTHQRQQEVDRFQNDETLP 967 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL + ++ WW+ R + G ++ +FVY L Sbjct: 968 FFLISLKAGGVGLNLTA-ADYVIHVDPWWNPAVEM-----QATDRTHRIGQEKPIFVYKL 1021 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I +N+++E +L + K + L+ A Sbjct: 1022 ITRNSVEEKILSLQQRKRELVAQLITA 1048 >gi|94272618|ref|ZP_01292159.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93450064|gb|EAT01427.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 596 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 72/210 (34%), Gaps = 26/210 (12%) Query: 5 HKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 +R LQ + EA ++ ++ + A E + K+ Sbjct: 374 ETIRRRAVEVLQEDEGEAAGSRHLKVLAELMRLRRAACHPRLVLGEGA---LMAGKLPLF 430 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEG 107 ++ +N +V F + LA + + + + + G Sbjct: 431 AEVLHDIISNRHKALVFSQFVAHLAIVREYLDGQGIGYQYLDGSTPARERKRAVAAFQAG 490 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL + ++ WW+ +E R + G +R V + Sbjct: 491 EGEVFCISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQASDRAHRIGQERPVTI 544 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+ + +I+E +L K + + LL+ Sbjct: 545 YRLVTKGSIEEKILALHGRKRDLAENLLSG 574 >gi|30019888|ref|NP_831519.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] gi|229127175|ref|ZP_04256172.1| Helicase, SWF/SNF [Bacillus cereus BDRD-Cer4] gi|29895433|gb|AAP08720.1| SWF/SNF family helicase [Bacillus cereus ATCC 14579] gi|228656291|gb|EEL12132.1| Helicase, SWF/SNF [Bacillus cereus BDRD-Cer4] Length = 1064 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 71/210 (33%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQDRVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|228945457|ref|ZP_04107809.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814210|gb|EEM60479.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 1064 Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|163797448|ref|ZP_02191399.1| SWI/SNF family helicase [alpha proteobacterium BAL199] gi|159177197|gb|EDP61756.1| SWI/SNF family helicase [alpha proteobacterium BAL199] Length = 421 Score = 124 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 25/212 (11%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + A ++ + + D++ V K+ A Sbjct: 203 YEALRRQSLDRLAAVDAPAGQRKIQILAEITRLRRACCNPALIDQDA---GVPSGKLAAF 259 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 +++ N +V F + LA + + + G Sbjct: 260 LDLVDDLVRNRHRALVFSQFVAHLALVRAALDARGIRYEYLDGSTPAADRERRVAAFQAG 319 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + +V WW+ +E R + G +R V + Sbjct: 320 TADVFLISLRAGGTGLNLTA-ADYVVHLDPWWNPA-----VEDQASDRVHRIGQERPVTI 373 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y LI Q++I+E +L+ R K + +L + Sbjct: 374 YRLIMQDSIEEQILRLHRDKRDLAADILEGGE 405 >gi|282857036|ref|ZP_06266287.1| helicase, SNF2/RAD54 family [Pyramidobacter piscolens W5455] gi|282585197|gb|EFB90514.1| helicase, SNF2/RAD54 family [Pyramidobacter piscolens W5455] Length = 1419 Score = 124 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 74/209 (35%), Gaps = 24/209 (11%) Query: 4 YHKFQRELYCDLQG-----ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y ++ + E + F ++ +K + + + K++A Sbjct: 1196 YEALRQSAVEAIDAAGNSPEEDKRFAVFAQLMKLRRCCCAVSLVSD-GVGAAIPSSKLEA 1254 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE 106 L ++++ + +V F L +++ K + + Sbjct: 1255 LLELVDELRESGHRALVFSQFTDHLRLIERALAERGVPCLYLDGSTPPGKRAELVSSFQS 1314 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + G GLNL G + +V WW+ +E R + G R V Sbjct: 1315 GRGDCFLISLRAGGTGLNLT-GADFVVHMDPWWNPA-----VEDQASDRAYRIGQTRPVT 1368 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY +A +T++E +++ R K + + LL Sbjct: 1369 VYRFVAAHTVEEKIVELHRRKRGLAESLL 1397 >gi|228994365|ref|ZP_04154249.1| Helicase, SNF2/RAD54 [Bacillus pseudomycoides DSM 12442] gi|228765382|gb|EEM14052.1| Helicase, SNF2/RAD54 [Bacillus pseudomycoides DSM 12442] Length = 867 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 76/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ K++ K + Sbjct: 644 LYEQLVQDTLQNIEGLTGIERRGFILMMLSKLKQICNHPALYLKEEAPKDIVQRSMKTQT 703 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + LQK + I+++ Sbjct: 704 LMDLIENIKDQNESCLIFTQYIGMGNMLQKILEEKFGQRVLFLNGSVPKIERDKMIEQFQ 763 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 764 NGTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 817 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + + L K ++ ++ + Sbjct: 818 HVHKLITTGTLEEKIDEMLERKQSLSSAIITS 849 >gi|218902968|ref|YP_002450802.1| putative helicase [Bacillus cereus AH820] gi|228930936|ref|ZP_04093897.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121402|ref|ZP_04250630.1| Helicase, SWF/SNF [Bacillus cereus 95/8201] gi|218535984|gb|ACK88382.1| putative helicase [Bacillus cereus AH820] gi|228662045|gb|EEL17657.1| Helicase, SWF/SNF [Bacillus cereus 95/8201] gi|228828715|gb|EEM74390.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 1064 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|217959332|ref|YP_002337880.1| putative helicase [Bacillus cereus AH187] gi|229138547|ref|ZP_04267132.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST26] gi|217067719|gb|ACJ81969.1| putative helicase [Bacillus cereus AH187] gi|228644907|gb|EEL01154.1| Helicase, SWF/SNF [Bacillus cereus BDRD-ST26] Length = 1064 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|149177854|ref|ZP_01856453.1| Snf2 family protein [Planctomyces maris DSM 8797] gi|148843344|gb|EDL57708.1| Snf2 family protein [Planctomyces maris DSM 8797] Length = 1110 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 25/212 (11%) Query: 3 QYHKFQREL------YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK--HWKEVHDE 54 Y + ++ + +G + ++ Q A D + D Sbjct: 889 LYDELRQHYRDSILGMVESKGLGKTKIHVLEALLRLRQAACHPALLDRGRALDASAKMDV 948 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWN 105 I LE +IE+ +V F S L+ +Q+ + G+T D+ + Sbjct: 949 LIPHLEELIEE--GHKALVFSQFTSMLSIVQEHLDQKNIVYEYLDGQTRDRKERVDRFQT 1006 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNL + + WW+ +E + R + G + V Sbjct: 1007 DKDCGVFLISLKAGGLGLNLTA-ADYVFILDPWWNPA-----VETQAIDRAHRVGQTKRV 1060 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F Y LI +NT++E + + + K + D +L Sbjct: 1061 FAYKLICRNTVEEKITELQQQKRELADAILEE 1092 >gi|327538183|gb|EGF24865.1| SWF/SNF family helicase [Rhodopirellula baltica WH47] Length = 966 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 71/218 (32%), Gaps = 28/218 (12%) Query: 2 KQYHKFQRELYCDL-------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y + +L E + S + QLA + + Sbjct: 740 KLYEDARLAALAELTAGGGAPSHEGRRRIQTLSWLTRLRQLACHPSLVEPS---WKGTSS 796 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQ 102 K++ ++E+ +V F + + + + Sbjct: 797 KLQLFLSLVEELREGDHRALVFSQFVKHLSVVRAALDERGISYQYLDGATPSHERQRRVD 856 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+ L + G GLNL + ++ WW+ +E R + G + Sbjct: 857 AFQNGEGDLFLISLKAGGTGLNLTA-ADYVLHLDPWWNPA-----VEDQATDRAHRIGQE 910 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RAV VY L+A+ TI+E +LQ K + +L+ Sbjct: 911 RAVTVYRLVAERTIEEQILQLHADKRELVAGILDGTDA 948 >gi|30261851|ref|NP_844228.1| helicase, putative [Bacillus anthracis str. Ames] gi|47527092|ref|YP_018441.1| helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184685|ref|YP_027937.1| helicase [Bacillus anthracis str. Sterne] gi|165869343|ref|ZP_02214002.1| putative helicase [Bacillus anthracis str. A0488] gi|167633415|ref|ZP_02391740.1| putative helicase [Bacillus anthracis str. A0442] gi|167638796|ref|ZP_02397071.1| putative helicase [Bacillus anthracis str. A0193] gi|170686032|ref|ZP_02877254.1| putative helicase [Bacillus anthracis str. A0465] gi|170707256|ref|ZP_02897711.1| putative helicase [Bacillus anthracis str. A0389] gi|177650600|ref|ZP_02933567.1| putative helicase [Bacillus anthracis str. A0174] gi|190566481|ref|ZP_03019399.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|227815374|ref|YP_002815383.1| putative helicase [Bacillus anthracis str. CDC 684] gi|229599991|ref|YP_002866233.1| putative helicase [Bacillus anthracis str. A0248] gi|254683351|ref|ZP_05147212.1| putative helicase [Bacillus anthracis str. CNEVA-9066] gi|254734706|ref|ZP_05192418.1| putative helicase [Bacillus anthracis str. Western North America USA6153] gi|254741114|ref|ZP_05198802.1| putative helicase [Bacillus anthracis str. Kruger B] gi|254755357|ref|ZP_05207391.1| putative helicase [Bacillus anthracis str. Vollum] gi|254759895|ref|ZP_05211919.1| putative helicase [Bacillus anthracis str. Australia 94] gi|30256079|gb|AAP25714.1| putative helicase [Bacillus anthracis str. Ames] gi|47502240|gb|AAT30916.1| putative helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178612|gb|AAT53988.1| helicase, putative [Bacillus anthracis str. Sterne] gi|164714783|gb|EDR20301.1| putative helicase [Bacillus anthracis str. A0488] gi|167513260|gb|EDR88631.1| putative helicase [Bacillus anthracis str. A0193] gi|167531453|gb|EDR94131.1| putative helicase [Bacillus anthracis str. A0442] gi|170127755|gb|EDS96627.1| putative helicase [Bacillus anthracis str. A0389] gi|170669729|gb|EDT20470.1| putative helicase [Bacillus anthracis str. A0465] gi|172083744|gb|EDT68804.1| putative helicase [Bacillus anthracis str. A0174] gi|190562616|gb|EDV16583.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|227003172|gb|ACP12915.1| putative helicase [Bacillus anthracis str. CDC 684] gi|229264399|gb|ACQ46036.1| putative helicase [Bacillus anthracis str. A0248] Length = 1064 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|32470671|ref|NP_863664.1| helicase [Rhodopirellula baltica SH 1] gi|32442816|emb|CAD71334.1| helicase [Rhodopirellula baltica SH 1] Length = 1176 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 71/218 (32%), Gaps = 28/218 (12%) Query: 2 KQYHKFQRELYCDL-------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y + +L E + S + QLA + + Sbjct: 950 KLYEDARLAALAELTAGGGAPSHEGRRRIQTLSWLTRLRQLACHPSLVEPS---WKGTSS 1006 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQ 102 K++ ++E+ +V F + + + + Sbjct: 1007 KLQLFLSLVEELREGDHRALVFSQFVKHLSVVRAALDERGISYQYLDGATPSHERQRRVD 1066 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+ L + G GLNL + ++ WW+ +E R + G + Sbjct: 1067 AFQNGEGDLFLISLKAGGTGLNLTA-ADYVLHLDPWWNPA-----VEDQATDRAHRIGQE 1120 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RAV VY L+A+ TI+E +LQ K + +L+ Sbjct: 1121 RAVTVYRLVAERTIEEQILQLHADKRELVAGILDGTDA 1158 >gi|228958135|ref|ZP_04119868.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801518|gb|EEM48402.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pakistani str. T13001] Length = 1064 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|224282308|ref|ZP_03645630.1| helicase [Bifidobacterium bifidum NCIMB 41171] gi|313139453|ref|ZP_07801646.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|313131963|gb|EFR49580.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 1339 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 34/243 (13%), Positives = 73/243 (30%), Gaps = 53/243 (21%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANGAVYYDEEKH--------- 47 K Y +++L + + ++ + Q+ E Sbjct: 1081 KLYAALEQQLRSVILSQRPADFNTGKIQILAQLTRLRQVCCDPRLIYENADGHASALSAG 1140 Query: 48 ---------------------WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR- 83 K V K+ A+ ++ + +++ F S L Sbjct: 1141 VQSAAKDPQQSVKQPVKQSKARKTVSSAKLDAIIELVDSCRDAGRKMLIFSQFTSYLDLI 1200 Query: 84 ---------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + +N P+ + GLNL G ++V Sbjct: 1201 AQRLRADGVEYDMITGATPKKRRLELVDRFNADATPVFLISLKAGNTGLNLT-GACVVVH 1259 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ R + G + V VY ++A++TI+E +L R+K+ + Sbjct: 1260 ADPWWNAAAQD-----QATDRAHRIGQTQDVNVYQIVAKDTIEERILNLQRSKTDLAQRF 1314 Query: 195 LNA 197 +++ Sbjct: 1315 VDS 1317 >gi|228984941|ref|ZP_04145110.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774764|gb|EEM23161.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 1064 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|229155427|ref|ZP_04283536.1| Helicase, SWF/SNF [Bacillus cereus ATCC 4342] gi|228627988|gb|EEK84706.1| Helicase, SWF/SNF [Bacillus cereus ATCC 4342] Length = 1064 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|229589086|ref|YP_002871205.1| putative helicase [Pseudomonas fluorescens SBW25] gi|229360952|emb|CAY47812.1| putative helicase [Pseudomonas fluorescens SBW25] Length = 897 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 81/212 (38%), Gaps = 23/212 (10%) Query: 3 QYHKFQ----RELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK-HWKEVHDEK 55 Y + +++ ++ + + +K Q+ ++ + K Sbjct: 665 VYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDATLPARGSSSGK 724 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWN 105 + +L ++E+ I++ F S L+ ++ + ++++ Sbjct: 725 LDSLMTMLEELFEEGRRILLFSQFTSMLSLIEVELKKRGVAYALLTGQTRDRRTPVKDFQ 784 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 GK+ + + G GLNL + ++ + WW+ E R + G ++ V Sbjct: 785 SGKLQIFLISLKAGGVGLNLTE-ADTVIHYDPWWNPAT-----ENQATDRAYRIGQEKPV 838 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 FVY +IA+ T++E + + KS + +L+ Sbjct: 839 FVYKMIARGTVEEKIQHLQKEKSDLAAGVLDG 870 >gi|119714405|ref|YP_921370.1| SNF2-related protein [Nocardioides sp. JS614] gi|119535066|gb|ABL79683.1| SNF2-related protein [Nocardioides sp. JS614] Length = 903 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 76/221 (34%), Gaps = 24/221 (10%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKI 56 Y F R+ ++ + + Q+ N ++ + EK+ Sbjct: 674 LYESFVRDTMARIERADPSDPVARRGLVLTLLTGLKQICNHPDHFLKRSGARLSGRSEKV 733 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 L+ ++ ++V + + L+ G + + + + Sbjct: 734 DLLDELVGTVLAEDGAVLVFTQYVAMARLLEGHLARAGVPHQLLHGGTPVREREAMVARF 793 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ P+ + G GLNL + +V WW+ +E R + G + Sbjct: 794 QAGETPVFLLSLKAGGTGLNLTR-ADHVVHVDRWWNPA-----VEEQATDRAYRIGQTKP 847 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V+ +I + T++E V + L K + D +L+ + + Sbjct: 848 VQVHRMITRGTVEEKVAELLTRKRALADAVLSRGEAALTEL 888 >gi|325570841|ref|ZP_08146524.1| Snf2 family protein [Enterococcus casseliflavus ATCC 12755] gi|325156351|gb|EGC68533.1| Snf2 family protein [Enterococcus casseliflavus ATCC 12755] Length = 1054 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 84/221 (38%), Gaps = 26/221 (11%) Query: 2 KQYHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + R++ ++ + + + + + Q+ + E+ E K+ Sbjct: 828 KIYLAYLRQMREEIAQMDSTSFRKNRISILAGLTRLRQICCDPRLFVEDY---EGSSGKL 884 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW 104 + ++ ++ K N +++ F S L+ ++ + + Sbjct: 885 EQVKDLLLAAKENGRRVLLFSQFTSMLSIIEEELAQEGFESFYLRGSTPPQDRLTMVNAF 944 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G+ + + G GLNL G + ++ + LWW+ +E R + G K Sbjct: 945 NSGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRIGQKNV 998 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V+ +IA+ TI+E + + K + ++ + + + Sbjct: 999 VEVWRMIAEGTIEERMDALQQEKRELFQKVIQGNETQLQQM 1039 >gi|311063653|ref|YP_003970378.1| helicase [Bifidobacterium bifidum PRL2010] gi|310865972|gb|ADP35341.1| Helicase [Bifidobacterium bifidum PRL2010] Length = 1339 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 35/243 (14%), Positives = 73/243 (30%), Gaps = 53/243 (21%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKH--------- 47 K Y +++L + N ++ + Q+ E Sbjct: 1081 KLYAALEQQLRSVILRQRPADFNTGKIQILAQLTRLRQVCCDPRLIYENADGHASALSAG 1140 Query: 48 ---------------------WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR- 83 K V K+ A+ ++ + +++ F S L Sbjct: 1141 VQSAAKDPQQSVKQPVKQSKARKTVSSAKLDAIIELVDSCRDAGRKMLIFSQFTSYLDLI 1200 Query: 84 ---------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + +N P+ + GLNL G ++V Sbjct: 1201 AQRLRADGVEYDMITGATPKKRRLELVDRFNADATPVFLISLKAGNTGLNLT-GACVVVH 1259 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ R + G + V VY ++A++TI+E +L R+K+ + Sbjct: 1260 ADPWWNAAAQD-----QATDRAHRIGQTQDVNVYQIVAKDTIEERILNLQRSKTDLAQRF 1314 Query: 195 LNA 197 +++ Sbjct: 1315 VDS 1317 >gi|310286756|ref|YP_003938014.1| helicase [Bifidobacterium bifidum S17] gi|309250692|gb|ADO52440.1| helicase [Bifidobacterium bifidum S17] Length = 1339 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 35/243 (14%), Positives = 73/243 (30%), Gaps = 53/243 (21%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKH--------- 47 K Y +++L + N ++ + Q+ E Sbjct: 1081 KLYAALEQQLRSVILRQRPADFNTGKIQILAQLTRLRQVCCDPRLIYENADGHASALSAG 1140 Query: 48 ---------------------WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR- 83 K V K+ A+ ++ + +++ F S L Sbjct: 1141 VQSAAKDPQQSVKQPVKQSKARKTVSSAKLDAIIELVDSCRDAGRKMLIFSQFTSYLDLI 1200 Query: 84 ---------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + +N P+ + GLNL G ++V Sbjct: 1201 AQRLRADGVEYDMITGATPKKRRLELVDRFNADATPVFLISLKAGNTGLNLT-GACVVVH 1259 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ R + G + V VY ++A++TI+E +L R+K+ + Sbjct: 1260 ADPWWNAAAQD-----QATDRAHRIGQTQDVNVYQIVAKDTIEERILNLQRSKTDLAQRF 1314 Query: 195 LNA 197 +++ Sbjct: 1315 VDS 1317 >gi|257438160|ref|ZP_05613915.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] gi|257199491|gb|EEU97775.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] Length = 1119 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 72/217 (33%), Gaps = 22/217 (10%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + ++ ++ + K+ A Sbjct: 899 KLYLAAVVDAREKLRAAKPEDKMAVFAVLMRLREICCDPRLIADN---WTGGSAKLDACI 955 Query: 61 VIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ + I++ F S L ++ +N G+ Sbjct: 956 ELVTSAVESGHRILLFSQFTSMLELLAKRLDAEGVSHFTLQGSTPKPVRAELVRRFNGGE 1015 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL +I++ + WW++ R + G + V VY Sbjct: 1016 ASVFLISLRAGGTGLNLTA-ADIVIHYDPWWNVAAQ-----NQATDRAYRIGQQNPVQVY 1069 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 LI Q+TI+E +++ + K + + + + + + Sbjct: 1070 KLITQDTIEEKIVELQQAKQDLAETVTGSADGAILRM 1106 >gi|229160810|ref|ZP_04288801.1| Helicase, SWF/SNF [Bacillus cereus R309803] gi|228622658|gb|EEK79493.1| Helicase, SWF/SNF [Bacillus cereus R309803] Length = 1068 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 73/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ N + ++ K + L I+ Sbjct: 853 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK---GSSAKFEQLLEIL 909 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 910 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDRFNEGEGDL 969 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 970 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1023 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1024 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1053 >gi|54309827|ref|YP_130847.1| hypothetical protein PBPRA2667 [Photobacterium profundum SS9] gi|46914265|emb|CAG21045.1| hypothetical protein PBPRA2667 [Photobacterium profundum SS9] Length = 1298 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 22/207 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++E + + + Q+ + E K+ + Sbjct: 1083 AYEAIRKESVAVAKSGKGM-VEVLACLTRLRQVCCDSRLVFSEMDQ---PSSKLNEALQL 1138 Query: 63 IEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKIP 110 +++ I+V F + L + + I + GK Sbjct: 1139 VKEAREGQHRILVFSQFVTLLKMFADQLEGDGINYSYLDGKSSSRQRKQAIDAFTSGKKE 1198 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + ++ WW+ +E R + G + V VY L Sbjct: 1199 VFLISLKAGGTGLNLTE-ADTVIHLDPWWNPA-----VEDQASDRAYRMGQTKPVTVYRL 1252 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 +A NTI+E ++ ++K + D +L+ Sbjct: 1253 VATNTIEEKIVLLHQSKRDLADKVLSG 1279 >gi|324325873|gb|ADY21133.1| helicase, putative [Bacillus thuringiensis serovar finitimus YBT-020] Length = 1064 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|229196057|ref|ZP_04322809.1| Helicase, SWF/SNF [Bacillus cereus m1293] gi|228587439|gb|EEK45505.1| Helicase, SWF/SNF [Bacillus cereus m1293] Length = 1064 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|134301077|ref|YP_001114573.1| SNF2 helicase associated domain-containing protein [Desulfotomaculum reducens MI-1] gi|134053777|gb|ABO51748.1| SNF2 helicase associated domain protein [Desulfotomaculum reducens MI-1] Length = 1084 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 73/205 (35%), Gaps = 23/205 (11%) Query: 5 HKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 K ++E ++G + + QL + E + K++ L I Sbjct: 868 EKIRQETKDALQIEGFEKSRIKILAGLTRLRQLCCHPSLFLENYSGQ---SGKLEQLMEI 924 Query: 63 IEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKIP 110 IE N ++V F S L + Q +N G+ Sbjct: 925 IENTLENKRRLLVFSQFASMLGIICEELDRLNKSYFYLDGQTPAKDRVEMTQRFNNGEKD 984 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G GLNL G + ++ + LWW+ IE R + G K V V L Sbjct: 985 LFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRMGQKNCVQVIKL 1038 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I + TI+E + + + K + + ++ Sbjct: 1039 ITKGTIEEKIYEMQQQKKELIEQVI 1063 >gi|225863710|ref|YP_002749088.1| putative helicase [Bacillus cereus 03BB102] gi|225786052|gb|ACO26269.1| putative helicase [Bacillus cereus 03BB102] Length = 1064 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|218753823|ref|ZP_03532619.1| helicase helZ [Mycobacterium tuberculosis GM 1503] gi|289762264|ref|ZP_06521642.1| helicase [Mycobacterium tuberculosis GM 1503] gi|289709770|gb|EFD73786.1| helicase [Mycobacterium tuberculosis GM 1503] Length = 559 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 25/212 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 326 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 385 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F R G + + + Sbjct: 386 EILEEILAEGDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEMVARF 445 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G P+ + G GLNL N +V WW+ +E R + G +R Sbjct: 446 QSGDGPPIFLLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQRR 499 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V I T++E + + + K + DL++ Sbjct: 500 TVQVRKFICTGTLEEKIDEMIEEKKALADLVV 531 >gi|52143616|ref|YP_083212.1| SWF/SNF family helicase [Bacillus cereus E33L] gi|51977085|gb|AAU18635.1| helicase, SWF/SNF family [Bacillus cereus E33L] Length = 1064 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|301053386|ref|YP_003791597.1| helicase, SWF/SNF family [Bacillus anthracis CI] gi|300375555|gb|ADK04459.1| helicase, SWF/SNF family [Bacillus cereus biovar anthracis str. CI] Length = 1064 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|261408135|ref|YP_003244376.1| SNF2-like protein [Paenibacillus sp. Y412MC10] gi|261284598|gb|ACX66569.1| SNF2-related protein [Paenibacillus sp. Y412MC10] Length = 1111 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K ++E L G + + Q+ + E E K Sbjct: 886 KLYTAYLAKLRQETLKHLAQDGFQKNRIRILAGITRLRQICCHPALFVEGY---EGGSAK 942 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQE 103 ++ L IE+ ++V F L + + Sbjct: 943 LEQLLETIEECRLAGRRMLVFSQFTGMLNLIAGELGYRGIPFFYLDGQTPGSERVELCER 1002 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ + + G GLNL G + ++ + LWW+ Q + R + G K+ Sbjct: 1003 FNEGEREVFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAMDRAHRIGQKK 1056 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V ++Q+TI++ ++ + K + + L+ Sbjct: 1057 VVQVIRFVSQDTIEDKMVALQQKKKDLIEELVQ 1089 >gi|149200479|ref|ZP_01877493.1| hypothetical protein LNTAR_13447 [Lentisphaera araneosa HTCC2155] gi|149136441|gb|EDM24880.1| hypothetical protein LNTAR_13447 [Lentisphaera araneosa HTCC2155] Length = 1021 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 80/211 (37%), Gaps = 21/211 (9%) Query: 2 KQYHKFQRELYCDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y D+ + + S + Q + EE KE+ K + Sbjct: 799 ELYKNIAENFLQDILQDQTAFSKRRLDILSLITRLRQTCSHPALLPEEFKAKEIESSKFQ 858 Query: 58 ALEVIIEKANA--APIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTIQEWN-E 106 + ++E+ +V F S L+ +++ + K + ++N + Sbjct: 859 LFQELVEEIRDSSHRALVFSQFTSMLSLMREWLDEQGIKYCYLDGSTKKRQDLVDQFNED 918 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I + G GLNL G + ++ + WW+ M+ R + G R V Sbjct: 919 DSIQFFLLSLKAGGTGLNLT-GADTVIHYDNWWNP-----MVVNQASDRAHRIGQTRNVN 972 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + L+AQNTI++ ++Q +TK + D L+ Sbjct: 973 IIKLVAQNTIEDKIIQLQKTKEKLFDQLVEG 1003 >gi|158320075|ref|YP_001512582.1| non-specific serine/threonine protein kinase [Alkaliphilus oremlandii OhILAs] gi|158140274|gb|ABW18586.1| Non-specific serine/threonine protein kinase [Alkaliphilus oremlandii OhILAs] Length = 1085 Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 76/212 (35%), Gaps = 27/212 (12%) Query: 2 KQYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + +E+ L+ E + + Q+ + E K Sbjct: 861 KIYVGYLKEIQGSLEEEIREYGFERSQIKILAALTRLRQICCHPAMFIENYTGT---SGK 917 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 + L+ IIE I++ F S L +++ + + Sbjct: 918 FELLQEIIENAIEGKHRILLFSQFTSMLSIIREMLESLNISYYYLDGSTPMEERGKLVSD 977 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G + + G GLNL G ++++ F WW+ +E R + G + Sbjct: 978 FNKGNSDVFLISLKAGGTGLNLT-GADMVIHFDPWWNPA-----VEEQATDRAYRIGQQN 1031 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +V V LI + TI+E + + K + D ++ Sbjct: 1032 SVHVMKLITKGTIEEKIAKLQERKRELIDAVI 1063 >gi|17233188|ref|NP_490278.1| hypothetical protein all7172 [Nostoc sp. PCC 7120] gi|17135710|dbj|BAB78256.1| all7172 [Nostoc sp. PCC 7120] Length = 1055 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 73/215 (33%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y R++ LQ S +K Q+ N + + + K+ L Sbjct: 823 LYEVVVRDVEEKLQEAEGIQRKGLILSTLMKLKQICNHPRQFLQDNSEFLPERSHKLSRL 882 Query: 60 EVIIEK--ANAAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 ++++ + +++ F +L G + + I ++ Sbjct: 883 VEMVDEAISEGESLLIFSQFTEVCEQIEKYLKHNLHCNTYYLHGGTSRQRREQMISDFQN 942 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G G+ L N + F WW+ +E R + G K+ Sbjct: 943 PDTEASVFVLSLKAGGVGITLTK-ANHVFHFDRWWNPA-----VEDQATDRAFRIGQKKN 996 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VFV+ +A T++E + Q + K + ++ + + Sbjct: 997 VFVHKFVALGTLEERIDQMIEDKKKLSSAVVGSDE 1031 >gi|307149654|ref|YP_003891024.1| SNF2-like protein [Cyanothece sp. PCC 7822] gi|306986783|gb|ADN18659.1| SNF2-related protein [Cyanothece sp. PCC 7822] Length = 1048 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 71/215 (33%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y +++ ++ S +K Q+ N + + + K++ L Sbjct: 817 LYEAVVKDVMEQIEETEGIQRKGLILSTLMKLKQICNHPRQFLQDNSEFTPERSHKLERL 876 Query: 60 EVIIEKA--NAAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 ++E+ +++ F G +K I + + Sbjct: 877 GEMVEEVIAEGESLLIFSQFTEIGEALQHYIKHTRHYNTYYLHGGTPRNKREQMIASFQD 936 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+ L N + F WW+ +E R + G ++ Sbjct: 937 PETDPSVFILSLKAGGVGITLTK-ANHVFHFDRWWNPA-----VEDQATDRAFRIGQQKN 990 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VFV+ + T++E + Q + K + ++ + + Sbjct: 991 VFVHKFVTLGTLEERIDQMIEDKKKVASSIVGSDE 1025 >gi|254723933|ref|ZP_05185719.1| putative helicase [Bacillus anthracis str. A1055] Length = 1064 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 23/205 (11%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 A TI+E + + +K + ++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIE 1044 >gi|150391520|ref|YP_001321569.1| non-specific serine/threonine protein kinase [Alkaliphilus metalliredigens QYMF] gi|149951382|gb|ABR49910.1| Non-specific serine/threonine protein kinase [Alkaliphilus metalliredigens QYMF] Length = 883 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 79/217 (36%), Gaps = 22/217 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + ++ L+ S +K Q+ N Y + +K H K + L Sbjct: 655 LYKQLIEQISEKLKVAEGIERKGLVLSSIMKFKQICNHPDQYMGREDYKSEHSGKFEQLR 714 Query: 61 VI--IEKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 I I +++ F ++ G + K ++++N E Sbjct: 715 EICQIIHEKRERVLIFTQFREMTEPLSDFLSGIFSKEGFVLHGGTPVKKRNEMVEQFNGE 774 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 IP + + G GLNL N ++ F WW+ +E R + G + V Sbjct: 775 HYIPYMVLSLKAGGVGLNLTA-ANHVIHFDRWWNPA-----VENQATDRAFRIGQTKNVM 828 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V+ + + TI+E + + K + +L+A ++ I Sbjct: 829 VHKFVTKGTIEEKIDAIIEEKQKLSGDILSAGGEQWI 865 >gi|317473515|ref|ZP_07932807.1| SNF2 family domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316899026|gb|EFV21048.1| SNF2 family domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 1116 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 22/211 (10%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + + L + S+ + QL ++ K V + + Sbjct: 895 KLYDAHVKRMQLMLDKQSEEEFKSSKIQILSELTRLRQLCCSPELVFDQYTGKSVKSD-L 953 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE 106 + + I++ F S ++ L+ +K ++++N Sbjct: 954 CIDLIKNAVSGGHKILLFSQFTSMISILEERLQAEKISFYTLIGSVNKEKRARMVEDFNN 1013 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL +I++ + WW+L ++ R + G + V Sbjct: 1014 DDTSVFCISLKAGGTGLNLTS-ADIVIHYDPWWNLA-----VQNQATDRAHRIGQENVVM 1067 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + TI++ +++ K + D +L Sbjct: 1068 VYRLIVEGTIEDNIVKLQEKKKELADQILGG 1098 >gi|222095476|ref|YP_002529536.1| helicase, putative [Bacillus cereus Q1] gi|221239534|gb|ACM12244.1| helicase, putative [Bacillus cereus Q1] Length = 1064 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|310640034|ref|YP_003944792.1| snf2-like protein [Paenibacillus polymyxa SC2] gi|309244984|gb|ADO54551.1| SNF2-like protein [Paenibacillus polymyxa SC2] Length = 1041 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y +L L G+ A K Q+ + + + K++ Sbjct: 809 LYRGVVDQLLGTLDGQVGMARKGLVLSSLTKLKQICDHPGLIIPGRADSSKTENSGKMER 868 Query: 59 LEVII--EKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 L ++ + N ++ + S L G + + + Sbjct: 869 LLELVETIRENNESALIFTQYVSMGELLVSRLAKILGEEPYFLHGGLAKTRRDEMVHNFQ 928 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +GK P + + G GLNL + ++ + WW+ +E R + G R Sbjct: 929 QGKGPNIFVLSLRAGGVGLNLTR-ASHVIHYDRWWNPA-----VENQATDRVFRIGQSRN 982 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ LI Q T++E + + + +K + + ++ + + Sbjct: 983 VQVHKLICQGTLEERIDELIESKKALSEQVVGSGE 1017 >gi|56964329|ref|YP_176060.1| DNA/RNA helicase [Bacillus clausii KSM-K16] gi|56910572|dbj|BAD65099.1| SNF2 family DNA/RNA helicase [Bacillus clausii KSM-K16] Length = 997 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 65/211 (30%), Gaps = 24/211 (11%) Query: 3 QYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y E + +A + Q+ N + ++ K A Sbjct: 767 LYQAVVEDVSERLATVAHLERKAM-ILRAITRMKQICNHPAQFYKDGDIAGHQSGKWDAF 825 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN- 105 I+ + +++ + + G + + I+++ Sbjct: 826 LDIVASIFSKGESVLIFTQYKEMGKLISHELQARYEVPVPFLHGGLSRSQRRMAIEQFQH 885 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL ++ + WW+ +E R + G + V Sbjct: 886 DPHAAAFVLSLKAGGVGLNLTK-ATNVIHYDRWWNPA-----VENQATDRAYRIGQTKPV 939 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY L+ T++E + Q + K + + +L Sbjct: 940 QVYKLLTAGTVEERIDQLINGKKALAEGVLQ 970 >gi|325690428|gb|EGD32431.1| SNF2 domain protein [Streptococcus sanguinis SK115] Length = 450 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 128/201 (63%), Gaps = 7/201 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +F+ E+ ++G+ ++A NSAS + K LQ++NG V YDE + +HD+K+ ALE Sbjct: 249 LAVYKEFKTEMMVSIKGQVLDAVNSASLSNKLLQMSNGMV-YDENRKAVLLHDQKLVALE 307 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E N P++VAY F DL R+++ F + R + I++WN+GKI L HPAS G Sbjct: 308 EMVESMNNRPLLVAYWFQHDLKRIKERFSEARV-IQSNQDIEDWNKGKIVLGLVHPASSG 366 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+ + +F L W LE +QQ+ R+ + G K V V+++I ++T+DE V Sbjct: 367 HGLNLQAGGHTICWFGLTWSLELYQQLNARLW-----RQGQKETVVVHHIITKSTMDEQV 421 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 ++RL+ K Q L++A+K E Sbjct: 422 MKRLKEKDISQQSLIDAVKYE 442 >gi|160944098|ref|ZP_02091328.1| hypothetical protein FAEPRAM212_01600 [Faecalibacterium prausnitzii M21/2] gi|158444774|gb|EDP21778.1| hypothetical protein FAEPRAM212_01600 [Faecalibacterium prausnitzii M21/2] Length = 562 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 88/211 (41%), Gaps = 21/211 (9%) Query: 2 KQYHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + +R + +L + I A +K ++ +QL G D+ ++V+ K+ ALE Sbjct: 353 KLYEQLRRSSFAELDSGDSITATTVLTKMLRLMQLTGGFTQTDDGTRPQQVNTAKLDALE 412 Query: 61 VIIEKA---NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-E 106 I++ + +++ F +++A + + + ++ Sbjct: 413 DILDDYVLETGSKLVIFARFRAEIAAIENALRKKGIPYGSIYGDVPQAERGKIVDDFQQN 472 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + A + G G+ L ++ VF+S+ ++ + + R + G V Sbjct: 473 PEAKVFVAQIQTAGLGITLHA-ASMAVFYSIDYNYANY-----AQALARIHRIGQHNPVT 526 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +L+ +++ID+ VL L K I ++++ Sbjct: 527 YIHLLVEDSIDDKVLAALENKEDIAKSIVDS 557 >gi|206975015|ref|ZP_03235930.1| putative helicase [Bacillus cereus H3081.97] gi|206747034|gb|EDZ58426.1| putative helicase [Bacillus cereus H3081.97] Length = 1064 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|262199842|ref|YP_003271051.1| SNF2-related protein [Haliangium ochraceum DSM 14365] gi|262083189|gb|ACY19158.1| SNF2-related protein [Haliangium ochraceum DSM 14365] Length = 1121 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 73/214 (34%), Gaps = 24/214 (11%) Query: 1 MKQYHKFQ----RELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-HD 53 +K Y REL L+ + + + Q+ Sbjct: 893 VKLYRDAVESRGRELLAALRDPEQPVPYMHVFALLTLLKQICCHPALVAGTPAAYGDYRS 952 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQ 102 +K + + ++ + + ++V F L ++ GRT + + Sbjct: 953 DKWELAKELVRESLDSGQKVVVYSQFLGMLEIFERHLRALGIGYAKLTGRTRKRGEVVAR 1012 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + + A + G G++L ++++ + WW+ E R + G Sbjct: 1013 FQDDPECRVFLASLTAGGVGIDLVA-ASVVLHYDRWWNAAR-----EDQATDRVHRMGQT 1066 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V L+ + T++E + + K + + ++ Sbjct: 1067 RGVQVIKLVTEGTLEEKIAALIAKKRQLMERVVQ 1100 >gi|228914427|ref|ZP_04078038.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845210|gb|EEM90250.1| Helicase, SWF/SNF [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 1064 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ + K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDDY---QGSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQEGKKNLIAEVIEPGEEK 1049 >gi|319650819|ref|ZP_08004956.1| hypothetical protein HMPREF1013_01562 [Bacillus sp. 2_A_57_CT2] gi|317397417|gb|EFV78118.1| hypothetical protein HMPREF1013_01562 [Bacillus sp. 2_A_57_CT2] Length = 939 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 70/212 (33%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKA 58 Y + ++ + ++ + QL N Y +E+ K++ Sbjct: 715 LYEQLVQDTFAQIEKLSGFERKGLILQLLSRLKQLCNHPALYLKEEKPKHVLERSVKLEK 774 Query: 59 LEVII--EKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWN 105 L ++ ++ + + I + Sbjct: 775 LSELVSAVHEQGESCLIFTQYIEMGNMIARLLKKQFGFDVPFLNGSVPKQERDNMISRFQ 834 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + P+ + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 835 DHEFPVFLLSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 888 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +IA T++E + L K ++ D ++ + Sbjct: 889 HVHKMIATGTLEEKIDAMLEKKQSLNDQIITS 920 >gi|323340857|ref|ZP_08081108.1| SWF/SNF family helicase [Lactobacillus ruminis ATCC 25644] gi|323091708|gb|EFZ34329.1| SWF/SNF family helicase [Lactobacillus ruminis ATCC 25644] Length = 975 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 80/212 (37%), Gaps = 26/212 (12%) Query: 3 QYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y EL +L + +K K Q+ + + K Sbjct: 756 LYQAMVNELRTELSQKSADEFKQSKIEILAKLTKIRQICCDPSLVYSDYDGE---SGKTD 812 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 +IE + IIV F S L+ L+ ++ ++E+N Sbjct: 813 NCMELIESALSGGHRIIVFSQFVSMLSILEKKLKQRKIEFYKIVGETPKEERFKMVEEFN 872 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +P+ + G GLNL G ++++ + WW+ + + R + G + V Sbjct: 873 QNDVPIFLISLKAGGTGLNL-VGADVIIHYDPWWN-----EAAQNQATDRAHRIGQTKNV 926 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI ++TI+E +L+ KS + D +L+ Sbjct: 927 LVYKLIVKDTIEEKILKMQEQKSKLADDILSG 958 >gi|229029537|ref|ZP_04185617.1| Helicase, SWF/SNF [Bacillus cereus AH1271] gi|228731736|gb|EEL82638.1| Helicase, SWF/SNF [Bacillus cereus AH1271] Length = 1064 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 73/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ N + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCDRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|329903743|ref|ZP_08273604.1| DNA helicase, SNF2/RAD54 family [Oxalobacteraceae bacterium IMCC9480] gi|327548223|gb|EGF32923.1| DNA helicase, SNF2/RAD54 family [Oxalobacteraceae bacterium IMCC9480] Length = 824 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 72/208 (34%), Gaps = 20/208 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + +R +G +K Q+ + K++ L ++ Sbjct: 607 EQVRR--VLARKGFRSGQITILDALLKLRQVCCDPYLLKGPAMVPAMERAKLELLRDLLP 664 Query: 65 --KANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL 112 A ++V F LA +Q + + + + E ++P+L Sbjct: 665 GLVAEGRRMLVFSQFTELLALVQTELDALDLPWLALTGATPVGQRAAIVAAFQERQVPIL 724 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ WW+ +E R + G + V VY LI Sbjct: 725 LISLKAGGVGLNLTA-ADTVIHLDPWWNPA-----VEEQATARAHRIGQTQTVLVYKLIV 778 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKK 200 + +I+E +L K+ + D ++ + Sbjct: 779 EGSIEERILALQARKAALADGVIGSDAA 806 >gi|323705524|ref|ZP_08117098.1| SNF2-related protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323535001|gb|EGB24778.1| SNF2-related protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 1065 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 76/213 (35%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + +++ E + + Q+ + E K Sbjct: 842 ELYMAYLENAKTEIEEEIRNKGFERSQIKIITALTRLRQICCHPSMFVENYKGT---SGK 898 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 ++ L +I++ + ++ F + L ++ + + + ++ Sbjct: 899 MELLMELIQELKESGHRALIFSQFTTALKLIEDNLKKEKISYLYLDGDTKTKERGELVKA 958 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G + + G GLNL G + ++ F WW+ IE R + G Sbjct: 959 FNKGDSDVFLISLKAGGTGLNL-IGADTVIHFDPWWNPA-----IEDQATDRAHRIGQVN 1012 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LI Q TI+E +++ K + + ++N Sbjct: 1013 TVQVIKLITQGTIEEKIVKLQEKKKEMINSVIN 1045 >gi|294499255|ref|YP_003562955.1| SNF2 helicase family protein [Bacillus megaterium QM B1551] gi|294349192|gb|ADE69521.1| SNF2 helicase family protein [Bacillus megaterium QM B1551] Length = 1068 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 75/209 (35%), Gaps = 23/209 (11%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + +L L GE+ + + Q+ + E E + K++ L Sbjct: 849 ELYVGYLEQLKSSLAGEDFNKNRMKILAGLTRLRQICCHPSLFVENY---EGYSSKLEQL 905 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEG 107 I A N +++ F S L + + +N G Sbjct: 906 LEITRSAVANGKRLLIFSQFTSMLHIIREELQKDNLSYFYLDGQTPSKERVEMADRFNNG 965 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL G + ++ + LWW+ IE R + G K V V Sbjct: 966 EQDIFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVVQV 1019 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI+Q TI+E + + K + + ++ Sbjct: 1020 IKLISQGTIEEKIYGLQQKKKELIEQVIQ 1048 >gi|262371025|ref|ZP_06064348.1| helicase superfamily protein II [Acinetobacter johnsonii SH046] gi|262314101|gb|EEY95145.1| helicase superfamily protein II [Acinetobacter johnsonii SH046] Length = 1115 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYD-EEKHWKEVHDE 54 K Y + + + +G +K Q+ + + + Sbjct: 889 KLYEAVRATMQASIQKIVAEKGFKRSQIQILDALLKLRQVCCHPSLLKLDSVKIGQANSA 948 Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEW 104 K++ L ++ I++ F S L +++ K I + Sbjct: 949 KLEQLMDMVVPMVEEGRKILIFSQFTSMLELIEQHLHYAEIGYVKLTGKTKKRDEVITAF 1008 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G++P+ + G GLNL + ++ + WW+ E R + G + Sbjct: 1009 QSGQVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----EDQASDRAWRIGQNKP 1062 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFVY LI +I+E ++ + K+ + +L+ Sbjct: 1063 VFVYKLITNKSIEEKIIALQQNKAELAHSILS 1094 >gi|91204322|emb|CAJ71975.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 1383 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 74/210 (35%), Gaps = 25/210 (11%) Query: 4 YHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +++ +++ G+ ++ +K + + + KI+ Sbjct: 1164 YEALRQKAIDNIESFDFGKGEGYLRVLAEIMKLRRACCHSRLVVPGHS---LESSKIRLF 1220 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEG 107 ++++ N +V F L + + + ++ + G Sbjct: 1221 GEVVQELMENNHKALVFSQFVDYLAIIREYVEGLNISYQYLDGSTPMKERKRSVDAFQSG 1280 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + L + G GLNL + ++ WW+ +E R + G KR V + Sbjct: 1281 EGELFLISLKAGGLGLNLTA-ADYVIHMDPWWNPA-----VEDQASDRAHRIGQKRPVTI 1334 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+ + TI+E ++ + K + D LL Sbjct: 1335 YRLVTKGTIEEKIVNLHQHKRELADSLLEG 1364 >gi|188532517|ref|YP_001906314.1| Putative helicase [Erwinia tasmaniensis Et1/99] gi|188027559|emb|CAO95406.1| Putative helicase [Erwinia tasmaniensis Et1/99] Length = 890 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 69/175 (39%), Gaps = 16/175 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ + + K H K+ L ++ A I++ F + L + + Sbjct: 703 RQICCDPRLLSDPRAEKVRHSAKLALLREMLRDLLAEDRRILIFSQFTTMLTIIAGELQK 762 Query: 91 GRTLD--------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 ++ + +G++P+ + G GLNL + ++ + WW+ Sbjct: 763 AHIPFVTLTGSTRDRNEPVRRFQQGEVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA 821 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E R + G + VFVY LIA +TI+E ++ + K+ + + +L+ Sbjct: 822 A-----ENQATDRAYRLGQDKPVFVYKLIAADTIEEKIVALQQQKADLAEEILSD 871 >gi|166363078|ref|YP_001655351.1| putative SNF2 helicase [Microcystis aeruginosa NIES-843] gi|166085451|dbj|BAG00159.1| putative SNF2 helicase [Microcystis aeruginosa NIES-843] Length = 1040 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 72/212 (33%), Gaps = 24/212 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y +E+ L+ S ++ Q+ N + + + K++ L Sbjct: 809 LYEVVIKEVEKQLEEAEGIKRKGLILSTLMRLKQICNHPRQFLQDNSAFTPERSHKLERL 868 Query: 60 EVIIEKA--NAAPIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTIQEWNE 106 ++E+ +++ F G + K I+E+ Sbjct: 869 GEMLEEVILEGDSLLIFTQFTEIGDSLQKYLKQTFRYNTYYLHGGTSQPKREQMIEEFQH 928 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+ L N + F WW+ +E R + G ++ Sbjct: 929 PETEPSVFILSLKAGGVGITLTK-ANHVFHFDRWWNPA-----VENQATDRAFRIGQQKN 982 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFV+ + T++E + + + K + + +++ Sbjct: 983 VFVHKFVTLGTLEERIDEMIEEKKKVANAIVS 1014 >gi|251797236|ref|YP_003011967.1| SNF2-related protein [Paenibacillus sp. JDR-2] gi|247544862|gb|ACT01881.1| SNF2-related protein [Paenibacillus sp. JDR-2] Length = 1026 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 78/238 (32%), Gaps = 41/238 (17%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 Y + +EL +++ S + QL N V +E Sbjct: 778 LYEQTVKELMDEVKKLEGIQRKGAILSALTRLKQLCNHPVLLTKEVVPVPEDEREEAAES 837 Query: 53 ------DEKIKALEVIIEK--ANAAPIIVAYHFN-----------SDLARLQKAFPQGRT 93 K++ L ++++ ++ + +L G + Sbjct: 838 AMLISRSAKLERLLDLVKELREEGERCLIFTQYIGMGEMLQRVLGRELGEPVLYLHGGSS 897 Query: 94 LDKDPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I+++ ++P + + G GLNL N + F WW+ Sbjct: 898 KTARDRMIEQFQSRELPPAEQPNVFILSIKAGGVGLNLTA-ANHVFHFDRWWNPA----- 951 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +E R + G R V V+ I+ T++E + + L +K + D ++ + + + Sbjct: 952 VENQATDRAYRMGQTRDVQVHKFISLGTLEERIDEMLESKQQLSDDVITSSEGWITEL 1009 >gi|148243480|ref|YP_001228637.1| SNF2 family DNA/RNA helicase [Synechococcus sp. RCC307] gi|147851790|emb|CAK29284.1| Superfamily II DNA/RNA helicases, SNF2 family [Synechococcus sp. RCC307] Length = 1016 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 74/219 (33%), Gaps = 26/219 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY---DEEKHWKEVHDEKI 56 K Y K +Q + + K Q+ N +E K+ Sbjct: 784 KLYRKTVDNTLEAIQRAPLGQRHGQVLGLLTKLKQICNHPALLLGEEEVGTDFASRSAKL 843 Query: 57 KALEVIIEK--ANAAPIIVAYHF--------NSDLARLQK---AFPQGRTLDKDPCTIQE 103 + LE I+E+ ++ F R ++ G + ++ + Sbjct: 844 QRLEEILEEVMEAGDRALLFTQFASWGHLLKTHLQQRWRQEVPFLHGGSSKNERQAMVDR 903 Query: 104 WNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + L + G GLNL + + WW+ +E R + G Sbjct: 904 FQQDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDRAYRIGQ 957 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V V+ I +++E + + ++ K+++ ++ + ++ Sbjct: 958 TQRVLVHKFITTGSLEEKIDRMIQEKASLAADIVGSGEE 996 >gi|315639730|ref|ZP_07894869.1| Snf2 family protein [Enterococcus italicus DSM 15952] gi|315484507|gb|EFU74964.1| Snf2 family protein [Enterococcus italicus DSM 15952] Length = 1055 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 78/215 (36%), Gaps = 24/215 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q E + + + + Q+ + +E + K++ ++ + Sbjct: 837 RQMQEE-ISQMDSSTFKKNRISILAGLTRLRQICCDPRLFVDEY---QGGSGKLEQVKDL 892 Query: 63 I--EKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKIP 110 + K N +++ F S L+ + + +NEG+ Sbjct: 893 LLAAKENKRRVLLFSQFTSMLSLIADELDEMGLSHFYLRGSTPPKDRIEMVDAFNEGEAD 952 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL G N ++ + LWW+ +E R + G K+ V ++ + Sbjct: 953 VFLISLKAGGTGLNLT-GANTVILYDLWWNPA-----VEEQAAGRAHRMGQKQVVEIWRM 1006 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I++ TI+E + K + ++ + + + Sbjct: 1007 ISEGTIEERMDDLQNEKRELFQKVIQGNEAQLQQM 1041 >gi|304315749|ref|YP_003850894.1| SNF2-related protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777251|gb|ADL67810.1| SNF2-related protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 1065 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 76/213 (35%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + +++ E + + Q+ + E K Sbjct: 842 ELYMAYLENAKTEIEEEIRNKGFERSQIKIITALTRLRQICCHPSMFVENYKGT---SGK 898 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 ++ L +I++ + ++ F + L ++ + + + ++ Sbjct: 899 MELLMELIQELKESGHRALIFSQFTTALKLIEDNLKKEKISYLYLDGDTKTKERGELVKA 958 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG + + G GLNL G + ++ F WW+ IE R + G Sbjct: 959 FNEGDSDVFLISLKAGGTGLNL-VGADTVIHFDPWWNPA-----IEDQATDRAHRIGQVN 1012 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LI Q TI+E +++ K + + ++N Sbjct: 1013 TVQVIKLITQGTIEEKIVKLQERKKEMINSVIN 1045 >gi|307700797|ref|ZP_07637822.1| SNF2 family N-terminal domain protein [Mobiluncus mulieris FB024-16] gi|307613792|gb|EFN93036.1| SNF2 family N-terminal domain protein [Mobiluncus mulieris FB024-16] Length = 970 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 81/214 (37%), Gaps = 22/214 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y K+ + +G + N + + QL+ A + KI L Sbjct: 754 ELYQKYLVAARLEAEGLRAKRLNVLTALTRLRQLSLSARLINPA---VPEDGAKIDYLVD 810 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIP 110 + A I+V F S LA L+ A+ G T ++ + + G Sbjct: 811 ALPDLAAQDHNILVFSQFTSFLALLRARLEDQGITYAYLDGSTRNRRDQ-VDCFQRGSAR 869 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + S G GLNL + + WW+ + +E + R + G R V VY L Sbjct: 870 VFLISLKSGGFGLNLTA-ADYVFLCDPWWNPQ-----VESQAIDRAHRIGQTRPVNVYRL 923 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL-NALKKETI 203 +A+NTI++ VL K + D +L + +E Sbjct: 924 VAKNTIEQRVLAMQAQKRELFDQVLRGSENREVT 957 >gi|306818666|ref|ZP_07452388.1| SNF2 family protein [Mobiluncus mulieris ATCC 35239] gi|304648352|gb|EFM45655.1| SNF2 family protein [Mobiluncus mulieris ATCC 35239] Length = 970 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 81/214 (37%), Gaps = 22/214 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y K+ + +G + N + + QL+ A + KI L Sbjct: 754 ELYQKYLVAARLEAEGLRAKRLNVLTALTRLRQLSLSARLINPA---VPEDGAKIDYLVD 810 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIP 110 + A I+V F S LA L+ A+ G T ++ + + G Sbjct: 811 ALPDLAAQDHNILVFSQFTSFLALLRARLEDQGITYAYLDGSTRNRRDQ-VDCFQRGSAR 869 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + S G GLNL + + WW+ + +E + R + G R V VY L Sbjct: 870 VFLISLKSGGFGLNLTA-ADYVFLCDPWWNPQ-----VESQAIDRAHRIGQTRPVNVYRL 923 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL-NALKKETI 203 +A+NTI++ VL K + D +L + +E Sbjct: 924 VAKNTIEQRVLAMQAQKRELFDQVLRGSENREVT 957 >gi|269976365|ref|ZP_06183357.1| helicase/SNF2 family domain-containing protein [Mobiluncus mulieris 28-1] gi|269935436|gb|EEZ91978.1| helicase/SNF2 family domain-containing protein [Mobiluncus mulieris 28-1] Length = 970 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 81/214 (37%), Gaps = 22/214 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y K+ + +G + N + + QL+ A + KI L Sbjct: 754 ELYQKYLVAARLEAEGLRAKRLNVLTALTRLRQLSLSARLINPA---VPEDGAKIDYLVD 810 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIP 110 + A I+V F S LA L+ A+ G T ++ + + G Sbjct: 811 ALPDLAAQDHNILVFSQFTSFLALLRARLEDQGITYAYLDGSTRNRRDQ-VDCFQRGSAR 869 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + S G GLNL + + WW+ + +E + R + G R V VY L Sbjct: 870 VFLISLKSGGFGLNLTA-ADYVFLCDPWWNPQ-----VESQAIDRAHRIGQTRPVNVYRL 923 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL-NALKKETI 203 +A+NTI++ VL K + D +L + +E Sbjct: 924 VAKNTIEQRVLAMQAQKRELFDQVLRGSENREVT 957 >gi|227875351|ref|ZP_03993493.1| SNF2 family superfamily II DNA/RNA helicase [Mobiluncus mulieris ATCC 35243] gi|227844256|gb|EEJ54423.1| SNF2 family superfamily II DNA/RNA helicase [Mobiluncus mulieris ATCC 35243] Length = 966 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 81/214 (37%), Gaps = 22/214 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y K+ + +G + N + + QL+ A + KI L Sbjct: 750 ELYQKYLVAARLEAEGLRAKRLNVLTALTRLRQLSLSARLINPA---VPEDGAKIDYLVD 806 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIP 110 + A I+V F S LA L+ A+ G T ++ + + G Sbjct: 807 ALPDLAAQDHNILVFSQFTSFLALLRARLEDQGITYAYLDGSTRNRRDQ-VDCFQRGSAR 865 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + S G GLNL + + WW+ + +E + R + G R V VY L Sbjct: 866 VFLISLKSGGFGLNLTA-ADYVFLCDPWWNPQ-----VESQAIDRAHRIGQTRPVNVYRL 919 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL-NALKKETI 203 +A+NTI++ VL K + D +L + +E Sbjct: 920 VAKNTIEQRVLAMQAQKRELFDQVLRGSENREVT 953 >gi|149180418|ref|ZP_01858923.1| helicase, SWF/SNF family protein [Bacillus sp. SG-1] gi|148852610|gb|EDL66755.1| helicase, SWF/SNF family protein [Bacillus sp. SG-1] Length = 1051 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 74/218 (33%), Gaps = 27/218 (12%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + + L + + + + Q+ + + + K Sbjct: 828 KLYAAYLAKLKHDTLKHLDKDTLRKNKIKILAGITRLRQICCHPALFVDGY---QGKSAK 884 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 ++ L IIE++ + +++ F L ++ Sbjct: 885 LQQLMEIIEESKSSGRRVLIFSQFTRMLGLIGRELTGEGLPYFYLDGATPSEERMDLCNR 944 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLNL + ++ + WW+ Q R + G + Sbjct: 945 YNTGERDIFLISLKAGGTGLNLHS-ADTVILYDTWWNPAVEQ-----QAADRAHRMGQQN 998 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V V L+A TI+E + + K + + L+++ + Sbjct: 999 TVQVIRLVATGTIEEKMNELQEKKRHLVEELIDSQENR 1036 >gi|251795916|ref|YP_003010647.1| SNF2-related protein [Paenibacillus sp. JDR-2] gi|247543542|gb|ACT00561.1| SNF2-related protein [Paenibacillus sp. JDR-2] Length = 1088 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 28/213 (13%) Query: 2 KQY----HKFQRELYCDLQGE---NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y K + E L + + + Q+ + E Sbjct: 857 KLYVSYLAKLRTETVKHLDNDRSLQQNRIKILAGLTRLRQICCHPALFI---TDYEGSSA 913 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQ 102 K + L I+E+ +++ F L+ + Sbjct: 914 KFEQLFEIVEECRSTGKRMLIFSQFTEMLSLISKELVRQGISYFYLDGSTKASERVELCN 973 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N+G+ + A + G GLNL G + ++ + LWW+ Q R + G Sbjct: 974 RFNDGEKDIFLASLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAHRIGQT 1027 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V V L A T+++ + K + D ++ Sbjct: 1028 KVVQVIRLAAHGTVEDKMYALQERKKNMIDDII 1060 >gi|94263787|ref|ZP_01287593.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93455798|gb|EAT05965.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 1439 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 26/208 (12%) Query: 5 HKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 +R LQ + EA ++ ++ + A + + K+ Sbjct: 1217 ETIRRRAVEVLQEDEGEAAGSRHLKVLAELMRLRRAACHPRLVLGKGA---LMAGKLPLF 1273 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEG 107 ++ +N +V F LA + + + + + G Sbjct: 1274 AEVLHDIISNRHKALVFSQFVDHLAIVREYLDGQGIGYQYLDGSTPARERQRAVAAFQAG 1333 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL + ++ WW+ +E R + G +R V + Sbjct: 1334 EGEVFCISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQASDRAHRIGQERPVTI 1387 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y L+ + +I+E +L K + + LL Sbjct: 1388 YRLVTKGSIEEKILALHGHKRDLAENLL 1415 >gi|293192909|ref|ZP_06609753.1| putative helicase [Actinomyces odontolyticus F0309] gi|292819965|gb|EFF78964.1| putative helicase [Actinomyces odontolyticus F0309] Length = 1043 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 76/210 (36%), Gaps = 22/210 (10%) Query: 2 KQYHKF---QRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y ++ +R DL + + + + QLA +E KI+ Sbjct: 825 RIYDQYLARERARILDLLRDVDANRMSVLAAITRLRQLALDPALVEESYAHVG--SAKIE 882 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEG 107 L +++ +V F S L R++ + + I+++ G Sbjct: 883 YLADRLDEIVPLGHQALVFSQFTSFLERIRHMLERRGISAVQLDGSTRGRAEVIEKFRSG 942 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GL L + + WW+ +Q I+R + G + V V Sbjct: 943 DAQVFLISLKAGGSGLTLTE-ADYVYVMDPWWNPAAEEQAIDR-----AHRIGQMKKVNV 996 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y ++A +TI+ V++ K + ++N Sbjct: 997 YRMVATDTIEAKVVELQDRKRQLISSVMNG 1026 >gi|154508745|ref|ZP_02044387.1| hypothetical protein ACTODO_01253 [Actinomyces odontolyticus ATCC 17982] gi|153798379|gb|EDN80799.1| hypothetical protein ACTODO_01253 [Actinomyces odontolyticus ATCC 17982] Length = 1043 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 76/210 (36%), Gaps = 22/210 (10%) Query: 2 KQYHKF---QRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y ++ +R DL + + + + QLA +E KI+ Sbjct: 825 RIYDQYLARERARILDLLRDVDANRMSVLAAITRLRQLALDPALVEESYAHVG--SAKIE 882 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEG 107 L +++ +V F S L R++ + + I+++ G Sbjct: 883 YLADRLDEIVPLGHQALVFSQFTSFLERIRHMLERRGISAVQLDGSTRGRAEVIEKFRSG 942 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GL L + + WW+ +Q I+R + G + V V Sbjct: 943 DAQVFLISLKAGGSGLTLTE-ADYVYVMDPWWNPAAEEQAIDR-----AHRIGQMKKVNV 996 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y ++A +TI+ V++ K + ++N Sbjct: 997 YRMVATDTIEAKVVELQDRKRQLISSVMNG 1026 >gi|167747531|ref|ZP_02419658.1| hypothetical protein ANACAC_02252 [Anaerostipes caccae DSM 14662] gi|167652893|gb|EDR97022.1| hypothetical protein ANACAC_02252 [Anaerostipes caccae DSM 14662] Length = 1117 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 22/211 (10%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + + L + S+ + QL ++ K V + + Sbjct: 896 KLYDAHVKRMQLMLDKQSEEEFKSSKIQILSELTRLRQLCCSPELVFDQYTGKSVKSD-L 954 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE 106 + + I++ F S ++ L+ +K ++++N Sbjct: 955 CIDLIKNAVSGGHKILLFSQFTSMISILEERLQAEKISFYTLTGSVNKEKRARMVEDFNN 1014 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL +I++ + WW+L ++ R + G + V Sbjct: 1015 DDTSVFCISLKAGGTGLNLTS-ADIVIHYDPWWNLA-----VQNQATDRAHRIGQENVVM 1068 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + TI++ +++ K + D +L Sbjct: 1069 VYRLIVEGTIEDNIVKLQEKKKELADQILGG 1099 >gi|229172496|ref|ZP_04300055.1| Helicase, SWF/SNF [Bacillus cereus MM3] gi|228610967|gb|EEK68230.1| Helicase, SWF/SNF [Bacillus cereus MM3] Length = 1064 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 73/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ N + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK---GSSAKFEQLLEIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKNLIAEVIEPGEEK 1049 >gi|255034080|ref|YP_003084701.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] gi|254946836|gb|ACT91536.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] Length = 1129 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 73/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y+ ++ E Y L + K Q+ N ++ ++ KI Sbjct: 907 KVYNAYELEFYNFLNTRNQGDIERSRLHVLQGLTKLRQICNSPALLRDDLYY-GDSSAKI 965 Query: 57 KALEVIIEKA-NAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNE 106 L IE I+V F S L ++ + G+T D+ Sbjct: 966 DVLMEQIEDTAPWHKILVFSQFTSMLDLIRPRLEERGIGYEYLTGQTRDRGARVENFQTN 1025 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + WW+ +E + R + G ++ V Sbjct: 1026 AHVRIFLISLKAGGTGLNLTE-ADYVYLIDPWWNPA-----VENQAIDRSHRIGQQKNVI 1079 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 LI TI+E V++ TK + + L+ Sbjct: 1080 AVRLICPGTIEEKVMELQETKKDLANDLV 1108 >gi|159028539|emb|CAO87345.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1040 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 72/212 (33%), Gaps = 24/212 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y +E+ L+ S ++ Q+ N + + + K++ L Sbjct: 809 LYEVVIKEVEKQLEEAEGIKRKGLILSTLMRLKQICNHPRQFLQDNSAFTPERSHKLERL 868 Query: 60 EVIIEKA--NAAPIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTIQEWNE 106 ++E+ +++ F G + K I+E+ Sbjct: 869 GEMLEEVILEGDSLLIFTQFTEIGDSLQKYLKQTFRYNTYYLHGGTSQPKREQMIEEFQH 928 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+ L N + F WW+ +E R + G ++ Sbjct: 929 PETEPSVFILSLKAGGVGITLTK-ANHVFHFDRWWNPA-----VENQATDRAFRIGQQKN 982 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFV+ + T++E + + + K + + +++ Sbjct: 983 VFVHKFVTLGTLEERIDEMIEEKKKVANAIVS 1014 >gi|300868337|ref|ZP_07112963.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300333630|emb|CBN58149.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 1109 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 73/219 (33%), Gaps = 28/219 (12%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEK 55 Y K E ++ + VK Q+ N + EE K++ K Sbjct: 869 IYQKVVEESLAAIESADGIQRRGMILALLVKLKQICNYPILSKEEGKSKKLEINSQESGK 928 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQ 102 ++ L+ ++E+ + ++ F L R G + I Sbjct: 929 LQRLDEMLEEVLSAEDRALIFTQFAEWGHLLKAHLEKHLGREILFLYGGTRQQQREEMID 988 Query: 103 EWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + P++ + G GLNL + + WW+ +E R + G Sbjct: 989 RFQHDPQGPPIMILSLKAGGTGLNLTR-ATHVFHYDRWWNPA-----VENQATDRVFRIG 1042 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R V V+ + T++E + + +K + + ++ + Sbjct: 1043 QTRNVQVHKFVCTGTLEEKIHDMIESKKALAEQVVGGGE 1081 >gi|153870520|ref|ZP_01999904.1| SNF2 family protein [Beggiatoa sp. PS] gi|152073016|gb|EDN70098.1| SNF2 family protein [Beggiatoa sp. PS] Length = 1036 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 74/215 (34%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y +E+ L+ +K Q+ N + + + + K++ L Sbjct: 804 LYEAVVKEVAAQLEEAEGIQRKGLMLSTLMKLKQICNHPRQFLQDSSIFSKERSHKLERL 863 Query: 60 EVIIEKA--NAAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 ++E+ ++ F +L G T +K I E+ E Sbjct: 864 TEMLEEVIAEQESALIFTQFTEIGENLNKYLKHNLNYNSYYLHGGTTRNKREQMITEFQE 923 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + + G G+ L N + F WW+ +E R + G + Sbjct: 924 SDTPPSVFVLSLKAGGVGITLTK-ANHVFHFDRWWNPA-----VEDQATDRAFRIGQHKN 977 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VFV+ ++ T++E + + + K I ++ + + Sbjct: 978 VFVHKFVSLGTLEERIDEMIEDKKKIARSIVGSDE 1012 >gi|295704607|ref|YP_003597682.1| SNF2 helicase family protein [Bacillus megaterium DSM 319] gi|294802266|gb|ADF39332.1| SNF2 helicase family protein [Bacillus megaterium DSM 319] Length = 1068 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 75/209 (35%), Gaps = 23/209 (11%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + +L L GE+ + + Q+ + E E + K++ L Sbjct: 849 ELYVGYLEQLKSSLAGEDFNKNRMKILAGLTRLRQICCHPSLFVENY---EGYSSKLEQL 905 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEG 107 I A N +++ F S L + + +N G Sbjct: 906 LEITRNAVANGKRLLIFSQFTSMLHIIREELQKENLSYFYLDGQTPSKERVEMADRFNNG 965 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL G + ++ + LWW+ IE R + G K V V Sbjct: 966 EQDIFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVVQV 1019 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI+Q TI+E + + K + + ++ Sbjct: 1020 IKLISQGTIEEKIYGLQQKKKELIEQVIQ 1048 >gi|153006894|ref|YP_001381219.1| non-specific serine/threonine protein kinase [Anaeromyxobacter sp. Fw109-5] gi|152030467|gb|ABS28235.1| Non-specific serine/threonine protein kinase [Anaeromyxobacter sp. Fw109-5] Length = 931 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 62/187 (33%), Gaps = 20/187 (10%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSD-- 80 + ++ Q+ N + + + K L I + + +V F Sbjct: 722 VLAYLLRLKQICNHPSQWLGDGEYGPGASGKFARLAEIADTVASRQEKALVFTQFREMTE 781 Query: 81 ---------LARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 R + ++ + + +P L + G GLNL + Sbjct: 782 PLARFLAGPFGRPGLVLHGHTRVKDRAALVRRFQEDETLPFLVLSLKAGGTGLNLTA-AS 840 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +V F WW+ +E R + G KR V V+ L+ + T++E + L K + Sbjct: 841 HVVHFDRWWNPA-----VENQATDRAFRIGQKRPVLVHKLVCRGTVEERIDSMLEDKRRL 895 Query: 191 QDLLLNA 197 LL Sbjct: 896 SQELLEG 902 >gi|152977445|ref|YP_001376962.1| non-specific serine/threonine protein kinase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026197|gb|ABS23967.1| Non-specific serine/threonine protein kinase [Bacillus cytotoxicus NVH 391-98] Length = 918 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++ K Q+ N Y +E K++ K++ Sbjct: 695 LYEQLVQDTLKNVENLNGIERRGFILLMLNKLKQICNHPALYLKEDVPKDIVQRSMKMQT 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + LQ + I+++ Sbjct: 755 LMDLIENIKNQNESCLIFTQYIGMGHMLQTVLEETFGQRVLYLNGSVPKKERDKMIEQFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 815 NRTYDIFILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V+ LI T++E + + L K ++ + ++ + Sbjct: 869 HVHKLITTGTLEEKIDEMLERKQSLNNAVITSDN 902 >gi|291547356|emb|CBL20464.1| Superfamily II DNA/RNA helicases, SNF2 family [Ruminococcus sp. SR1/5] Length = 1130 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y L ++ + Q+ E + K+ Sbjct: 908 ELYEAHTERFRLMLGMQSDAEFRTSKLQILAEITRLRQICCYPGLVYEGYK---GNSSKL 964 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 + +++ I++ F + L + +K + + Sbjct: 965 EMCMELVQNAVNGGHKILLFSQFTTMLDVLAVRLKKAKVSFYMLTGSTSKEKRAQMVHAF 1024 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 NE + + G GLNL +I++ + WW+L ++ R + G + Sbjct: 1025 NEDDTSVFCISLKAGGTGLNLTA-ADIVIHYDPWWNLA-----VQNQATDRAHRIGQQNV 1078 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L ++TI+E + K + D +LN Sbjct: 1079 VSVYRLFMKDTIEERIRALQERKRELADEILNG 1111 >gi|156603990|ref|YP_001429936.1| hypothetical protein SPTP3102_gp41 [Staphylococcus phage tp310-2] gi|154818076|gb|ABS87503.1| hypothetical protein [Staphylococcus phage tp310-2] Length = 455 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 115/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y ++ +E+HD+K++ LE Sbjct: 257 KLYDELEKHYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDDGDVREIHDKKLEKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILERFKEATT-LEDSNYKERWNSGNIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YEALQNKELTQEELMKAIKARI 451 >gi|293400001|ref|ZP_06644147.1| SNF2 domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306401|gb|EFE47644.1| SNF2 domain protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 446 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 79/203 (38%), Positives = 117/203 (57%), Gaps = 9/203 (4%) Query: 1 MKQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 M YH+F+RE + + I A N+ T K LQ GAV YDE +E+HD K+KAL Sbjct: 250 MVAYHRFKREKILQICEDGVITAANAGVVTNKLLQFTAGAV-YDENHEVQELHDTKLKAL 308 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-PCTIQEWNEGKIPLLFAHPAS 118 E ++E AN P++V Y+F D R+ FP + +++WN+GKI +L HPAS Sbjct: 309 EDLLEAANGNPVMVFYYFKHDRDRIIDHFPDVEIRAIECQQDVKDWNDGKIEMLLVHPAS 368 Query: 119 CGHGLNLQYGGNILVFFS-LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 GHGLNLQ GGNI+++++ W+LE + R + G + V +Y+LIA+ T+D Sbjct: 369 VGHGLNLQQGGNIIIWYTLPNWNLELYL-----QANARLHRQGQQNTVMIYHLIAKGTVD 423 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 E +++ L K Q L+ ALK+ Sbjct: 424 EDMIRSLEQKDISQKTLIEALKR 446 >gi|1769947|emb|CAA67095.1| SNF [Bacillus cereus ATCC 10987] Length = 1064 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ N + ++ K++ L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK---GSSAKLEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKHLIAEVIEPGEEK 1049 >gi|145595877|ref|YP_001160174.1| non-specific serine/threonine protein kinase [Salinispora tropica CNB-440] gi|145305214|gb|ABP55796.1| Non-specific serine/threonine protein kinase [Salinispora tropica CNB-440] Length = 1050 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 64/214 (29%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ + + Q+ N + + K+ LE Sbjct: 820 LYRAVVDDMMAQIESSEGIERRGLVLAAMTRLKQVCNHPAHLLRDNSALVGRSGKLARLE 879 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNEG 107 I+++ ++ + L+ G + + Sbjct: 880 EILDEVLVAGEKALLFTQYAEFGGMLRGHLSARFGQETLFLHGGVGKADRDAMVTRFQSP 939 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P L + G GL L N +V WW+ +E R + G +R V Sbjct: 940 DGPALFVLSLKAGGTGLTLTA-ANHVVHVDRWWNPA-----VEDQATDRAFRIGQRRRVQ 993 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V + T++E V + K + ++ A ++ Sbjct: 994 VRKFVCAGTVEEKVAALIADKRRLASTVVGAGEQ 1027 >gi|315223118|ref|ZP_07864986.1| protein, SNF2 family [Streptococcus anginosus F0211] gi|315187807|gb|EFU21554.1| protein, SNF2 family [Streptococcus anginosus F0211] Length = 1036 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + + + + E N S ++ Q+ + + E+ H + K+++L ++ Sbjct: 815 KQMRERVLTSTEEELNRSKMEILSGLMRLRQICDTPALFMEDYHGE---SGKLESLMELL 871 Query: 64 EKAN--AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ + +++ F L ++ + +N G+ Sbjct: 872 EQIQTGSHRVLIFSQFRGMLDIIEKELKKMKIETFKITGSTPAKERQEMTNAFNNGEGDA 931 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY LI Sbjct: 932 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VESQAIGRAHRMGQERNVEVYRLI 985 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + Sbjct: 986 TRGTIEEKIQELQESKRHLVSTILDGTESR 1015 >gi|303245900|ref|ZP_07332182.1| SNF2-related protein [Desulfovibrio fructosovorans JJ] gi|302492683|gb|EFL52551.1| SNF2-related protein [Desulfovibrio fructosovorans JJ] Length = 755 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 68/215 (31%), Gaps = 23/215 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++L L + K Q+ N + + K+ L Sbjct: 524 LYAAVLKDLEKTLAEAEGIKRKGIILATLSKLKQVCNHPAQFLGDNSAIADRSGKLSRLT 583 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWN-- 105 ++E+ +V F L+ G T + ++ + Sbjct: 584 EMLEEVVEAGDRALVFTQFKEMGDLLKTHLQETFGQELLFLHGGVTKNLRDKMVERFQSS 643 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G P+ + G GLNL N + + WW+ +E R + G + V Sbjct: 644 AGAPPIFILSLKAGGTGLNLTN-ANHVFHYDRWWNPA-----VENQATDRAFRIGQHKNV 697 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ + T+++ + + K ++ + ++ + Sbjct: 698 LVHKFLCVGTLEDKIDAMIEQKQSLANAVVGTGEA 732 >gi|266625310|ref|ZP_06118245.1| helicase, SNF2/RAD54 family [Clostridium hathewayi DSM 13479] gi|288862792|gb|EFC95090.1| helicase, SNF2/RAD54 family [Clostridium hathewayi DSM 13479] Length = 889 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 66/200 (33%), Gaps = 21/200 (10%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 ++ + ++ + Q+ K++ +I Sbjct: 679 VKQQLELAGDGGSDRIQILAQLTRLRQICCDPHL---CYSNYNGSSAKLETCIDLIRNGV 735 Query: 66 ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I++ F S L ++ + + + +P+ Sbjct: 736 EGGHKILLFSQFTSMLEIIEKRLKKEGMAYYILTGATPKEERLHMVSSFKDDGVPVFLIS 795 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL ++++ + WW++ R + G ++ V V+ LI + T Sbjct: 796 LKAGGTGLNLTA-ADVVIHYDPWWNVAAQ-----NQATDRTHRIGQEKQVTVFKLITKGT 849 Query: 176 IDELVLQRLRTKSTIQDLLL 195 I+E +L+ +K + + ++ Sbjct: 850 IEENILKLQESKKNLAEQII 869 >gi|166362977|ref|YP_001655250.1| SNF2 helicase-like protein [Microcystis aeruginosa NIES-843] gi|166085350|dbj|BAG00058.1| SNF2 helicase homolog [Microcystis aeruginosa NIES-843] Length = 1020 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 71/216 (32%), Gaps = 24/216 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKA 58 + Y + ++ + + ++ Q+ N ++ E K+ Sbjct: 782 QLYQQLVETTLQKIEEIQGIQKHGLILTLLMQLKQICNHPAHFLKENSLETSQRSGKLLR 841 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWN 105 LE ++E+ A ++ F LQ + I+ + Sbjct: 842 LEAMVEEVIAEGDRALIFTQFAEWGKLLQTHLQKKLAEEILFLSGSTKAKDRVEMIERFQ 901 Query: 106 EGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL N + WW+ +E R + G KR Sbjct: 902 NDPQGPKIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPA-----VENQATDRAFRIGQKR 955 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ I T++E + + + +K + + ++A + Sbjct: 956 NVQVHKFICTGTLEERINEMIESKKQLAEQTVDAGE 991 >gi|330897626|gb|EGH29045.1| SNF2-related:helicase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 559 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 331 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 390 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 391 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 450 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 451 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 504 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 505 ARGTVEEKIQRLQREKSALASGVLDG 530 >gi|315604148|ref|ZP_07879214.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315313854|gb|EFU61905.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 1045 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 22/210 (10%) Query: 2 KQYHK----FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + + + L + + S + QLA D + V KI+ Sbjct: 827 RIYDQHLARVRARILDLLADVDANRMSVLSSLTRLRQLALDPALVD--GAYSRVGSAKIE 884 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEG 107 L +++ +V F S LAR++ + I+E+ G Sbjct: 885 YLADHLDEIVPLGHQALVFSQFTSFLARIRGALERRGIAVVQLDGSTRDRDRVIEEFRSG 944 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GL L + + WW+ +Q I+R + G + V V Sbjct: 945 QAQVFLISLKAGGAGLTLTE-ADYVYVMDPWWNPAAEEQAIDR-----AHRIGQTKKVNV 998 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A +TI+ V++ K + ++N Sbjct: 999 YRLVAADTIEAKVVELQDRKRRLISSVMNG 1028 >gi|297561233|ref|YP_003680207.1| SNF2-related protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845681|gb|ADH67701.1| SNF2-related protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 1033 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 67/210 (31%), Gaps = 24/210 (11%) Query: 3 QYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y E+ + + + + + Q+ N + + K++ + Sbjct: 803 LYKAVVDEMGERLAEATEKERKGL-VLATMSRLKQICNHPAQFLGDGSALSGRSGKLERV 861 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNE 106 E I+ A + + R G + Q + E Sbjct: 862 EAILASAAAEGDKALCFTQYARFGERLAPYLRSRLGVPVLWLHGGTPRAEREEMTQRFQE 921 Query: 107 GKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + P + + G GLNL N +V WW+ +E R + G +R V Sbjct: 922 MEGPAVFLLSLKAAGTGLNLTA-ANHVVHVDRWWNPA-----VENQATDRAFRIGQRRDV 975 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V ++ T++E V + + KS + D + Sbjct: 976 QVRKMVCVGTVEERVDEMIERKSALADGAV 1005 >gi|269127783|ref|YP_003301153.1| SNF2-like protein [Thermomonospora curvata DSM 43183] gi|268312741|gb|ACY99115.1| SNF2-related protein [Thermomonospora curvata DSM 43183] Length = 990 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 60/210 (28%), Gaps = 23/210 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ + A + + Q+ N + K++ L Sbjct: 759 LYQATVDDMLAQIAEAGSSAARRGLVLATMARLKQVCNHPAQLLRDGSRLAGRSGKLERL 818 Query: 60 EVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNE 106 E I + + + L G ++ + E Sbjct: 819 EEICAQVVERGEKALAFTQYAEFGAMLQPYLAARLGCPVLWLHGGTPRRVRDELVRRFQE 878 Query: 107 GKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 P + + G GL L N +V WW+ +E R + G R V Sbjct: 879 EAEPAVFLLSLKAAGTGLTLTA-ANHVVHIDRWWNPA-----VEDQATDRAFRIGQTRDV 932 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V LI T++E V + + K + ++ Sbjct: 933 QVRKLICVGTLEERVEEMIERKKALAGSVV 962 >gi|42780946|ref|NP_978193.1| helicase, putative [Bacillus cereus ATCC 10987] gi|42736867|gb|AAS40801.1| helicase, putative [Bacillus cereus ATCC 10987] Length = 1064 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ N + ++ K++ L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK---GSSAKLEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + +K + ++ +++ Sbjct: 1020 AHGTIEEKMHELQESKKHLIAEVIEPGEEK 1049 >gi|229096334|ref|ZP_04227307.1| Helicase, SWF/SNF [Bacillus cereus Rock3-29] gi|228687294|gb|EEL41199.1| Helicase, SWF/SNF [Bacillus cereus Rock3-29] Length = 1068 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ N + ++ K + L I+ Sbjct: 853 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK---GSSAKFEQLLEIL 909 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 910 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCNRFNEGEGDL 969 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 970 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1023 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + TK + ++ + + Sbjct: 1024 AHGTIEEKMHELQETKKNLIAEVIEPGEGK 1053 >gi|229102446|ref|ZP_04233153.1| Helicase, SWF/SNF [Bacillus cereus Rock3-28] gi|228680931|gb|EEL35101.1| Helicase, SWF/SNF [Bacillus cereus Rock3-28] Length = 1068 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ N + ++ K + L I+ Sbjct: 853 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK---GSSAKFEQLLEIL 909 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 910 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCNRFNEGEGDL 969 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 970 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1023 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + TK + ++ + + Sbjct: 1024 AHGTIEEKMHELQETKKNLIAEVIEPGEGK 1053 >gi|282898428|ref|ZP_06306418.1| SNF2-related helicase [Raphidiopsis brookii D9] gi|281196594|gb|EFA71500.1| SNF2-related helicase [Raphidiopsis brookii D9] Length = 1427 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 71/208 (34%), Gaps = 21/208 (10%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +R+ L + + ++ ++ + + + ++ Sbjct: 1208 YEALRRQAISKLNESDADPGRKHLQVLAEIMRLRRACCSPSLVMPDINLSS-SKLQLLGE 1266 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 + N +V F L ++ + + + ++ + G Sbjct: 1267 LLAELLENHHKALVFSQFVDHLHIIRNYLERKSIKYQYLDGSTPMAERKRSVDSFQAGDG 1326 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + ++ WW+ +E R + G +R V +Y Sbjct: 1327 DVFLISLKAGGTGLNLTA-ADYVIHTDPWWNPA-----VEDQASDRAHRIGQERPVTIYR 1380 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+A++TI++ +++ K + D LL Sbjct: 1381 LVAKDTIEDKIVELHHHKRDLADTLLEG 1408 >gi|302871105|ref|YP_003839741.1| SNF2-related protein [Caldicellulosiruptor obsidiansis OB47] gi|302573964|gb|ADL41755.1| SNF2-related protein [Caldicellulosiruptor obsidiansis OB47] Length = 1139 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 92/230 (40%), Gaps = 35/230 (15%) Query: 2 KQYHKF----QRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y +F ++E+ ++ G S + Q+ E+ K Sbjct: 917 KIYKQFLVSAKKEIEKEIDSAGFEKSQIKIFSLLTRLRQICCHPKLVFEDYK---GSSGK 973 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 ++AL+ I++ + +I+ + S L+ ++K + + L + Sbjct: 974 MEALKEILQDCLESGHRVIIYSQWTSMLSIIKKMLDKEKILYFYLDGATKAEDRVEMVNR 1033 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLN+ G ++++ F WW+ +E R + G K Sbjct: 1034 FNSGEKNVFLLSLKAGGFGLNIT-GADVVIHFDAWWNPA-----VENQATARSHRLGQKN 1087 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--------LKKETIHV 205 V + +IA+N+I+E +L + K + D L+ A K+E + + Sbjct: 1088 VVQSFKIIAKNSIEEKILALQQKKKDLFDSLIEASQSFIGKLTKEEIMEL 1137 >gi|229074784|ref|ZP_04207799.1| Helicase, SWF/SNF [Bacillus cereus Rock4-18] gi|228708296|gb|EEL60454.1| Helicase, SWF/SNF [Bacillus cereus Rock4-18] Length = 1068 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ N + ++ K + L I+ Sbjct: 853 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK---GSSAKFEQLLEIL 909 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 910 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCNRFNEGEGDL 969 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 970 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1023 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + TK + ++ + + Sbjct: 1024 AHGTIEEKMHELQETKKNLIAEVIEPGEGK 1053 >gi|229115289|ref|ZP_04244698.1| Helicase, SWF/SNF [Bacillus cereus Rock1-3] gi|228668121|gb|EEL23554.1| Helicase, SWF/SNF [Bacillus cereus Rock1-3] Length = 1068 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ N + ++ K + L I+ Sbjct: 853 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK---GSSAKFEQLLEIL 909 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 910 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCNRFNEGEGDL 969 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 970 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1023 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+E + + TK + ++ + + Sbjct: 1024 AHGTIEEKMHELQETKKNLIAEVIEPGEGK 1053 >gi|113475235|ref|YP_721296.1| hypothetical protein Tery_1543 [Trichodesmium erythraeum IMS101] gi|110166283|gb|ABG50823.1| Protein splicing site [Trichodesmium erythraeum IMS101] Length = 1531 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 72/223 (32%), Gaps = 33/223 (14%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEK------HWKEVHDE 54 Y ++ G + +K QL N V +K + + Sbjct: 1292 LYQNIVENSLAEIDTVGGIQRKGKILALLIKLKQLCNHPVLLQIKKGSRKKVEITDKNSG 1351 Query: 55 KIK----ALEVIIEKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPC 99 K++ LE II + I+ F L R K Sbjct: 1352 KLQRLGAMLEEIISEEE--RAIIFTQFAEWGKVLQPYLQKSLGREVSFLYGSTQRSKREE 1409 Query: 100 TIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++ P++ + G GLNL N + F WW+ +E R Sbjct: 1410 MIDQFQLDPQGPPVMILSLKAGGTGLNLTR-ANHVFHFDRWWNPA-----VENQATDRVF 1463 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V V+ + T++E + + +K + + ++ A +K Sbjct: 1464 RIGQTRNVQVHKFVCTGTLEEKIHDLIESKKELAEQVVGAGEK 1506 >gi|212640482|ref|YP_002317002.1| SWF/SNF family helicase [Anoxybacillus flavithermus WK1] gi|212561962|gb|ACJ35017.1| SWF/SNF family helicase [Anoxybacillus flavithermus WK1] Length = 898 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ L+ + A QL N Y +EKH K++ K++ Sbjct: 674 LYEQIVQQSLEKLEQVDGFARRGIILQMLNSLKQLCNHPALYLKEKHPKQIVERSHKVEK 733 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L ++E+ N ++ + +Q I+++ Sbjct: 734 LLELVEQIRENGESCLIFTQYIQMGEMIQHLLSTHLKETVVFLNGSTPKQTRDEMIEQFQ 793 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL N ++ F WW+ +E R + G + V Sbjct: 794 NGQFHIFILSLKAGGTGLNLTA-ANHVIHFDRWWNPA-----VENQATDRAYRIGQTKFV 847 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I TI+E + L K + + L+ + Sbjct: 848 HVHKFITTGTIEEKIDDMLEKKQALNEQLIQS 879 >gi|300718555|ref|YP_003743358.1| helicase/SNF2 domain-containing protein [Erwinia billingiae Eb661] gi|299064391|emb|CAX61511.1| helicase/SNF2 domain-containing protein [Erwinia billingiae Eb661] Length = 877 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 70/175 (40%), Gaps = 16/175 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ +K K H K+ L +++ A I++ F + L+ + + + Sbjct: 689 RQICCDPRLVKTDKAAKVKHSAKLALLREMLDDLLAEDRRILIFSQFTTMLSLIAEELQK 748 Query: 91 GRTLD--------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R ++ + EG++P+ + G GLNL + ++ + WW+ Sbjct: 749 ARIPFVTLTGSTRDRIEPVRRFQEGEVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA 807 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E R + G + VFVY LIA +I+E ++ K+ + D +L Sbjct: 808 A-----ENQATDRAYRLGQDKPVFVYKLIAAGSIEEKIVALQGQKAELADSILED 857 >gi|167630922|ref|YP_001681421.1| snf2 family helicase [Heliobacterium modesticaldum Ice1] gi|167593662|gb|ABZ85410.1| snf2 family helicase [Heliobacterium modesticaldum Ice1] Length = 449 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 17/210 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK Y R+ Y +L + A N ++ ++ Q+ G + E + V K +ALE Sbjct: 233 MKIYRDLVRDSYAELGKGEVTATNILTRLLRLSQITGGFIGGGEGGPVQRVSTAKEEALE 292 Query: 61 VIIEK--ANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTIQEWNEGKI 109 IIE + +++ F ++ ++ + G D++ N ++ Sbjct: 293 DIIEDVLQSGKKLVIIARFIPEINAICRLLEKKGIRYSLLMGGVKDREEQVSAFQNGPEV 352 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G+ L + +VF+SL + + + R + G K Y Sbjct: 353 QVFVGQIATAGLGVTLTA-ASTMVFYSLDYSMSNFE-----QARARIHRVGQKENCTYLY 406 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 L A+ T+DE VL+ LR K+ + +L++ + Sbjct: 407 LTAKGTVDEKVLKALRDKADLARMLVDDYR 436 >gi|255348934|ref|ZP_05380941.1| SWI/SNF family helicase [Chlamydia trachomatis 70] gi|255503474|ref|ZP_05381864.1| SWI/SNF family helicase [Chlamydia trachomatis 70s] Length = 1199 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 89/223 (39%), Gaps = 25/223 (11%) Query: 2 KQYH-KFQREL--YCDLQGEN----IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHD 53 + Y ++E L+ E + + + + Q+ + VY+ + + +K Sbjct: 954 QLYSSTLKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICDHPAVYFKDPESYKNHSS 1013 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQ 102 K A ++ + + ++V + + + + A QG++ ++ + Sbjct: 1014 GKWAAFVKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVQGKSQNRKEEIDR 1073 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1074 FSNDPNCRVFIGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQK 1127 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + + + +HV Sbjct: 1128 NTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|302345308|ref|YP_003813661.1| SNF2 family N-terminal domain protein [Prevotella melaninogenica ATCC 25845] gi|302150135|gb|ADK96397.1| SNF2 family N-terminal domain protein [Prevotella melaninogenica ATCC 25845] Length = 1343 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 78/209 (37%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M Y +RE + + ++ ++ Q+A D ++ K+ A Sbjct: 1124 MAMYEVKRRETEAKILENKADKVSTLAELTHLRQMACSCSLVD---KKWKLPSSKVLAFI 1180 Query: 61 VIIEKANA--APIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGK 108 + E N +V F S ++ ++E+ GK Sbjct: 1181 DLAESLNDSDNRALVFSQFTSFFEEVRKAMDKAKLPYLYLDGSTSMAMREKLVKEFQTGK 1240 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N +V WW+ Q R + G ++ V VY Sbjct: 1241 CPFFLISLKAGGLGLNLT-GANYVVHLDPWWNPAIEQ-----QATDRAYRIGQQQDVTVY 1294 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +LI+Q+TI+E +L+ +TK + D LL Sbjct: 1295 HLISQHTIEEKILRLHKTKRNLSDSLLEG 1323 >gi|255507152|ref|ZP_05382791.1| SWI/SNF family helicase [Chlamydia trachomatis D(s)2923] Length = 1199 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 89/223 (39%), Gaps = 25/223 (11%) Query: 2 KQYH-KFQREL--YCDLQGEN----IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHD 53 + Y ++E L+ E + + + + Q+ + VY+ + + +K Sbjct: 954 QLYSSTLKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICDHPAVYFKDPESYKNHSS 1013 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQ 102 K A ++ + + ++V + + + + A QG++ ++ + Sbjct: 1014 GKWAAFVKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVQGKSQNRKEEIDR 1073 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1074 FSNDPNCRVFIGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQK 1127 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + + + +HV Sbjct: 1128 NTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|89095677|ref|ZP_01168571.1| hypothetical protein B14911_03069 [Bacillus sp. NRRL B-14911] gi|89089423|gb|EAR68530.1| hypothetical protein B14911_03069 [Bacillus sp. NRRL B-14911] Length = 942 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 78/212 (36%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKA 58 Y + ++ + +++ + QL N Y +E+ K++ Sbjct: 718 LYEQLVKDTFAEIEKLSGFERKGLILQLLSRLKQLCNHPALYLKEEKPSHLLERSSKLEK 777 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWN 105 L +++ ++ + +QK + + ++ I + Sbjct: 778 LNELVDAVLEQEESCLIFTQYIEMGHMIQKIMKKRHGIDVPFLNGSVSKNERDRMITRFQ 837 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G+ P+ + G GLNL N ++ + WW+ +E R + G +R V Sbjct: 838 DGEFPVFLLSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQERFV 891 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI T++E + L K T+ D ++ + Sbjct: 892 HVHKLICTGTLEEKIDLMLEKKQTLNDQVIQS 923 >gi|289525600|emb|CBJ15078.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis Sweden2] gi|296435160|gb|ADH17338.1| SWI/SNF family helicase [Chlamydia trachomatis E/150] gi|296438880|gb|ADH21033.1| SWI/SNF family helicase [Chlamydia trachomatis E/11023] Length = 1199 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 89/223 (39%), Gaps = 25/223 (11%) Query: 2 KQYH-KFQREL--YCDLQGEN----IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHD 53 + Y ++E L+ E + + + + Q+ + VY+ + + +K Sbjct: 954 QLYSSTLKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICDHPAVYFKDPESYKNHSS 1013 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQ 102 K A ++ + + ++V + + + + A QG++ ++ + Sbjct: 1014 GKWAAFVKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVQGKSQNRKEEIDR 1073 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1074 FSNDPNCRVFIGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQK 1127 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + + + +HV Sbjct: 1128 NTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|326789214|ref|YP_004307035.1| SNF2-related protein [Clostridium lentocellum DSM 5427] gi|326539978|gb|ADZ81837.1| SNF2-related protein [Clostridium lentocellum DSM 5427] Length = 1119 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 80/217 (36%), Gaps = 27/217 (12%) Query: 2 KQYHK----FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++E+ +L+ + + A + + + QL Y ++ K Sbjct: 895 KLYTAHLALAKKEMEEELKAKGVGASHIKMLALLTRLRQLCCHPSMYLQDYTET---SGK 951 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 ++ I++ I++ F + L ++ + E Sbjct: 952 LEQCMEIVKDSIEAGHKILLFSQFTTMLDILSNRLYSEGIEHFMLTGSTKAEERMRLVNE 1011 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N IP+ + G GLNL G ++++ + WW+L R + G K Sbjct: 1012 FNTSDIPVFLISLKAGGTGLNLT-GADVVIHYDPWWNLSSQ-----NQATDRAYRIGQKN 1065 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ +I +N+I+E + + K + + +L + Sbjct: 1066 KVQVFQMITKNSIEEKIKELQDKKIGLTESVLQEGEA 1102 >gi|292900753|ref|YP_003540122.1| helicase [Erwinia amylovora ATCC 49946] gi|291200601|emb|CBJ47732.1| putative helicase [Erwinia amylovora ATCC 49946] Length = 852 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 69/175 (39%), Gaps = 16/175 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ + + K H K+ L ++ A I++ F + L + + Sbjct: 665 RQICCDPRLLADARAEKVRHSAKLALLREMLHDLLAEDRRILIFSQFTTMLTIIAGELHK 724 Query: 91 GRTLD--------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R ++ + +G++P+ + G GLNL + ++ + WW+ Sbjct: 725 ARIPFVTLTGATRDRNEPVRSFQQGEVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA 783 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E R + G + VFVY LIA TI+E ++ + K+ + + +LN Sbjct: 784 A-----ENQATDRAWRLGQDKPVFVYKLIAAGTIEEKIVALQQQKADLAEEILND 833 >gi|292486850|ref|YP_003529720.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia amylovora CFBP1430] gi|291552267|emb|CBA19304.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia amylovora CFBP1430] Length = 852 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 69/175 (39%), Gaps = 16/175 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ + + K H K+ L ++ A I++ F + L + + Sbjct: 665 RQICCDPRLLADARAEKVRHSAKLALLREMLHDLLAEDRRILIFSQFTTMLTIIAGELHK 724 Query: 91 GRTLD--------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R ++ + +G++P+ + G GLNL + ++ + WW+ Sbjct: 725 ARIPFVTLTGATRDRNEPVRSFQQGEVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA 783 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E R + G + VFVY LIA TI+E ++ + K+ + + +LN Sbjct: 784 A-----ENQATDRAWRLGQDKPVFVYKLIAAGTIEEKIVALQQQKADLAEEILND 833 >gi|330443940|ref|YP_004376926.1| helicase, Snf2/Rad54 family [Chlamydophila pecorum E58] gi|328807050|gb|AEB41223.1| helicase, Snf2/Rad54 family [Chlamydophila pecorum E58] Length = 1117 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 86/213 (40%), Gaps = 19/213 (8%) Query: 6 KFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVII 63 + ++ L+ E + + Q+ + V++ + + + H K ++ Sbjct: 887 QQEKSQIQQLETEETTNFLHIFALLNHLKQICDHPAVFFKKPEEYHHHHSGKWNVFVKLL 946 Query: 64 EKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + + + ++V + + + + A QG++L++ + + + Sbjct: 947 QDSLASGYKVVVFSQYIHMIQIITQYLEEIGIKYASIQGKSLNRKEEIERFSTDPTCRVF 1006 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL GNI++ + WW+ + E + R + G K VF+Y LI Sbjct: 1007 VGSLLAAGTGINLTA-GNIVIMYDRWWNPAK-----ENQALDRVHRFGQKNTVFIYKLIT 1060 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +NT++E + + K + D ++ +H+ Sbjct: 1061 ENTLEERIHYLIEKKIHLLDKVIVTQDSNILHM 1093 >gi|326803590|ref|YP_004321408.1| SNF2 family N-terminal domain protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650654|gb|AEA00837.1| SNF2 family N-terminal domain protein [Aerococcus urinae ACS-120-V-Col10a] Length = 970 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 79/213 (37%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS----ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + ++ L+ ++ + + + Q+ + + K + Sbjct: 746 VYLAYLEDIRDRLKDNDVNGSHKHMEMLAAITRLRQICCHPALVN---SDYQGTSGKFEY 802 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNE 106 + ++E+ +N I+V F S LA +Q Q K + +N+ Sbjct: 803 FKRMLERALSNHRRILVFSQFTSMLAIMQDYLDQEAINYFIIEGKTNKEKRQDQVNRFNQ 862 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G G+NL G + + + LWW+ +E + R + G + V Sbjct: 863 GEGSVFLISLRAGGVGINLT-GADTVFLYDLWWNPS-----VEEQAIGRAHRIGQTKDVE 916 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY I + TI+E + + K + D L + Sbjct: 917 VYRFITEGTIEERIAELQEEKRHLFDELFQDEE 949 >gi|119897130|ref|YP_932343.1| SWI/SNF family helicase [Azoarcus sp. BH72] gi|119669543|emb|CAL93456.1| SWI/SNF family helicase [Azoarcus sp. BH72] Length = 1098 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 69/212 (32%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGEN------IEAFNSASKTVKCLQLANGAVYYDEEKHW-KEVHDEK 55 Y + + ++ E +K Q+ K K Sbjct: 870 LYETVRAAMDSKIRDEIAAKGYARSQIVILDALLKLRQVCCDPRLLKTTAAAAKVKERAK 929 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWN 105 + L ++ + I+V F LA + ++++ Sbjct: 930 LDLLMSMLPELIDEGRRILVFSQFTQMLALIAAELDKAKIGWVALTGDTRDRRIPVEDFQ 989 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G+ P+ + G GLNL + ++ + WW+ E R + G + V Sbjct: 990 KGRAPVFLISLKAGGVGLNLTT-ADTVIHYDPWWNPAA-----ENQATDRAHRIGQDKPV 1043 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 FV+ LI +I+E +L K+ + +L+ Sbjct: 1044 FVFKLICAGSIEERILSLQDKKAALAASVLSE 1075 >gi|312623213|ref|YP_004024826.1| SNF2-like protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203680|gb|ADQ47007.1| SNF2-related protein [Caldicellulosiruptor kronotskyensis 2002] Length = 1140 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 88/230 (38%), Gaps = 35/230 (15%) Query: 2 KQYHKF----QRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y +F ++E+ ++ G S + Q+ E+ K Sbjct: 917 KIYKQFLVSAKKEIEKEIDSAGFEKSQIKIFSLLTRLRQICCHPKLVFEDYK---GSSGK 973 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQE 103 ++AL+ I++ + +I+ + S L+ + + + Sbjct: 974 MEALKEILQDCLESGHRVIIYSQWTSMLSIINKMLDKEKILYFYLDGATKAEDRVEMVNR 1033 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLN+ G ++++ F WW+ +E R + G K Sbjct: 1034 FNSGERNVFLLSLKAGGFGLNIT-GADVVIHFDAWWNPA-----VENQATARAHRLGQKN 1087 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--------LKKETIHV 205 V + +IA+N+I+E +L + K + D L+ A K+E + + Sbjct: 1088 VVQSFKIIAKNSIEEKILALQQKKKDLFDSLIEASQSFIGKFTKEEIMEL 1137 >gi|150388431|ref|YP_001318480.1| non-specific serine/threonine protein kinase [Alkaliphilus metalliredigens QYMF] gi|149948293|gb|ABR46821.1| Non-specific serine/threonine protein kinase [Alkaliphilus metalliredigens QYMF] Length = 1141 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 78/213 (36%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + ++ +++ + + Q+ + E E K Sbjct: 919 KLYLAYLKQIKGQIQEEIEQNGFERSQMKILAGLTRLRQICCHPSLFVENY---EGGSGK 975 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQE 103 + LE ++ I++ F S L +++ ++ ++E Sbjct: 976 LDLLEEVVAASLEAGHRILLFSQFTSMLKMIREKLDQQGIEYAYLDGSTPMEARGEIVKE 1035 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEGK + + G GLNL G + ++ F WW+ +E R + G K Sbjct: 1036 FNEGKGSIFLISLKAGGTGLNLT-GADTVIHFDPWWNPA-----VEDQATDRAYRIGQKN 1089 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V IAQ TI+E + + K + + ++ Sbjct: 1090 KVHVMKFIAQGTIEEKIFKLQERKKEMINAVIQ 1122 >gi|56421797|ref|YP_149115.1| DNA/RNA helicase [Geobacillus kaustophilus HTA426] gi|56381639|dbj|BAD77547.1| DNA/RNA helicase (SNF2 family) [Geobacillus kaustophilus HTA426] Length = 919 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + + + + A Q+ + Y +E+ +++ K++ Sbjct: 688 LYEQLVNDTLERAKEASPFARRGLILQMLNGVKQICDHPALYLKERRPRQLVERSHKLEK 747 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +IE+ N ++ + +Q+ G + E+ Sbjct: 748 LIELIEQIRANDESCLIFTQYVRMGEMIQELLSDLFDERVLFLHGGVPKQTRDRMVDEFQ 807 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K P+ + G GLNL N ++ F WW+ +E R + G + V Sbjct: 808 AKKAPIFLLSLKAGGTGLNLTA-ANHVIHFDRWWNPA-----VENQATDRAYRIGQTKFV 861 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI TI+E + + L K + D++ Sbjct: 862 HVHKLITTGTIEEKIDEMLEQKQALADVITEG 893 >gi|326798632|ref|YP_004316451.1| SNF2-related protein [Sphingobacterium sp. 21] gi|326549396|gb|ADZ77781.1| SNF2-related protein [Sphingobacterium sp. 21] Length = 1176 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 74/212 (34%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDL-----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y K+ + +L +G + +K Q+ N K H K+ Sbjct: 954 RVYEKYLQYFRGELANKIEEGRDKATMFVLEALMKLRQICNSPAILP--KETYPNHSSKL 1011 Query: 57 KALEV-IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEW 104 + ++ I+EK +++ F S L L+ + + + Sbjct: 1012 EEIQEHILEKTQGHKLLIFSSFTSMLGLLKIELEKMGIAYAYLDGKTSGEQRQQEVTRFQ 1071 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GLNL + + WW+ E + R + G ++ Sbjct: 1072 EQDDCRVFLISLKAGGTGLNLTA-ADYVYILDPWWNPAA-----EAQAIDRCYRIGQEKH 1125 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V Y +I ++TI+E +L K + D L+ Sbjct: 1126 VMAYRMICKDTIEEKILNMQANKKALADSLIQ 1157 >gi|121607802|ref|YP_995609.1| SNF2-like protein [Verminephrobacter eiseniae EF01-2] gi|121552442|gb|ABM56591.1| SNF2-related protein [Verminephrobacter eiseniae EF01-2] Length = 917 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K L LQ + ++ Q+ N + + + K L Sbjct: 681 LYQKSVEALARQLQTLEGIERRGVVLAFLMRFKQICNHPSQWLGDGAYGPSDSGKFARLR 740 Query: 61 VIIEKANAA--PIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 + E ++V F AR G + + + + E Sbjct: 741 ELAEAVAGRQEKVLVFTQFQEMTAPLVQFLQSVFARPGLVLHGGTAVKERAALVDAFQRE 800 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + G GLNL + +V F WW+ +E R + G K+ V Sbjct: 801 QGPPFFVLSLKAGGTGLNLTA-ASHVVHFDRWWNPA-----VENQATDRAYRIGQKKNVL 854 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ + + T++E + + K + + ++ Sbjct: 855 VHKFVCRGTVEERIDALVEAKLGLSNQIIEG 885 >gi|15605284|ref|NP_220070.1| SWI/SNF family helicase [Chlamydia trachomatis D/UW-3/CX] gi|3328995|gb|AAC68157.1| SWI/SNF family helicase [Chlamydia trachomatis D/UW-3/CX] gi|296437016|gb|ADH19186.1| SWI/SNF family helicase [Chlamydia trachomatis G/11222] Length = 1199 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 89/223 (39%), Gaps = 25/223 (11%) Query: 2 KQYH-KFQREL--YCDLQGEN----IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHD 53 + Y ++E L+ E + + + + Q+ + VY+ + + +K Sbjct: 954 QLYSSTLKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICDHPAVYFKDPESYKNHSS 1013 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQ 102 K A ++ + + ++V + + + + A QG++ ++ + Sbjct: 1014 GKWAAFVKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVQGKSQNRKEEIDR 1073 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1074 FSNDPNCRVFIGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQK 1127 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + + + +HV Sbjct: 1128 NTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|90409119|ref|ZP_01217240.1| Snf2 family protein [Psychromonas sp. CNPT3] gi|90309770|gb|EAS37934.1| Snf2 family protein [Psychromonas sp. CNPT3] Length = 1080 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 71/209 (33%), Gaps = 24/209 (11%) Query: 3 QYHKFQ-------RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 Y + R+L + +G +K Q E + K Sbjct: 855 LYESIRITMEAKVRDLLKE-KGMARSRIEFLDALLKLRQACCDPRLVKLEHAKEVKSSAK 913 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWN 105 + L ++ + I++ F + L ++ I+ + Sbjct: 914 LDFLMNMVSEMVEEGRRILIFSQFATMLTLIEEELIEKGIDFVKLTGQTRDRGAIIERFQ 973 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G++P+ + G GLNL + ++ + WW+ +E R + G + V Sbjct: 974 SGEVPIFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA-----VENQATDRAYRIGQDKPV 1027 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 FVY LI + T++E VL K + D + Sbjct: 1028 FVYKLICEQTVEERVLALHARKQKLADSV 1056 >gi|312170918|emb|CBX79177.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia amylovora ATCC BAA-2158] Length = 852 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 69/175 (39%), Gaps = 16/175 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ + + K H K+ L ++ A I++ F + L + + Sbjct: 665 RQICCDPRLLADARAEKVRHSAKLALLREMLHDLLAEDRRILIFSQFTTMLTIIAGELHK 724 Query: 91 GRTLD--------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R ++ + +G++P+ + G GLNL + ++ + WW+ Sbjct: 725 ARIPFVTLTGATRDRNEPVRSFQQGEVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPA 783 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E R + G + VFVY LIA TI+E ++ + K+ + + +LN Sbjct: 784 A-----ENQATDRAWRLGQDKPVFVYKLIAAGTIEEKIVALQQQKADLAEEILND 833 >gi|315499178|ref|YP_004087982.1| snf2-related protein [Asticcacaulis excentricus CB 48] gi|315417190|gb|ADU13831.1| SNF2-related protein [Asticcacaulis excentricus CB 48] Length = 1107 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 70/218 (32%), Gaps = 24/218 (11%) Query: 3 QYHKFQ----RELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + ++ + + + +K Q+ + ++ K+ Sbjct: 886 LYDTIRLSLHTQVRKAIAERGLAKSHIIVLDALLKLRQVCCDPSLLKIDGT-EDAPSAKL 944 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARL--------QKAFPQGRTLDKDPCTIQEWNE 106 L ++ +I+ F S L + + + Sbjct: 945 DRLMEMVTALAEEGRRLIIFSQFTSMLDLIAARLDKAGLGYGILTGKTQNRKKEVDAFQS 1004 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + ++ + WW+ +E + R + G + VF Sbjct: 1005 GDNPIFLISLKAGGTGLNLTS-ADTVILYDPWWNPA-----VEAQAIDRAYRIGQDKPVF 1058 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 VY L A+ TI++ + + K + L + + + Sbjct: 1059 VYRLCAEGTIEDKMDEMKARKQALSHALFDED-ADMVE 1095 >gi|33866892|ref|NP_898451.1| SNF2 helicase-like protein [Synechococcus sp. WH 8102] gi|33639493|emb|CAE08877.1| SNF2 helicase homolog [Synechococcus sp. WH 8102] Length = 1063 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 68/217 (31%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIK 57 Y K + + + + Q+ N E + K++ Sbjct: 833 LYSKTVEDTLDAIARAPRGQRHGQVLGLLTRLKQICNHPALALSENAVDDGFLGRSAKLQ 892 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEW 104 LE I+++ ++ F LQ G ++ + + Sbjct: 893 RLEEILDEVIEAGDRALLFTQFAEWGHLLQSWMQQRWKADVPFLHGGTRKNERQAMVDRF 952 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E L + G GLNL + + WW+ +E R + G Sbjct: 953 QEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDRAYRIGQT 1006 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ I +++E + + +R KS + + ++ + + Sbjct: 1007 NRVMVHKFITSGSVEEKIDRMIREKSRLAEDVIGSGE 1043 >gi|228996916|ref|ZP_04156549.1| Helicase, SWF/SNF [Bacillus mycoides Rock3-17] gi|228762795|gb|EEM11709.1| Helicase, SWF/SNF [Bacillus mycoides Rock3-17] Length = 1025 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 71/213 (33%), Gaps = 27/213 (12%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + E L + + + + Q+ + ++ K Sbjct: 802 KLYAAYLAKLREETLKHLNKDTLRKNKIRILAGLTRLRQICCHPGLFVDDYR---GSSAK 858 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 + L I+E+ I++ F L+ + Sbjct: 859 FEQLLEIVEECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGNTPAFERVELCNR 918 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ Q R + G K Sbjct: 919 FNEGEGDLFLISLRAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKN 972 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+A TI+E + + +K + ++ Sbjct: 973 TVQVIKLVAHGTIEEKMNELQESKKNLIAEVIE 1005 >gi|319652149|ref|ZP_08006268.1| helicase [Bacillus sp. 2_A_57_CT2] gi|317396138|gb|EFV76857.1| helicase [Bacillus sp. 2_A_57_CT2] Length = 1072 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 76/214 (35%), Gaps = 27/214 (12%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + + L + + + + Q+ + + K Sbjct: 849 KLYAAYLAKLREDTLKHLNKDTLRKNRIRILAGLTRLRQICCHPALFVDGYK---GSSAK 905 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 + L+ IIE++ + +++ F L + + Sbjct: 906 FEQLKRIIEESRLSGRRVLIFSQFTKMLDLIGRELALLDLPFFYLDGQIPSAERVEICRR 965 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ + G GLNL G + ++ + LWW+ +E R + G K Sbjct: 966 FNEGERDFFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAADRAHRIGQKN 1019 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V L+++ TI+E + + K + + ++++ Sbjct: 1020 TVQVIKLLSRGTIEEKMNELQDKKKNLIEEIIDS 1053 >gi|297748685|gb|ADI51231.1| SWF/SNF family helicase [Chlamydia trachomatis D-EC] gi|297749565|gb|ADI52243.1| SWF/SNF family helicase [Chlamydia trachomatis D-LC] Length = 1202 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 89/223 (39%), Gaps = 25/223 (11%) Query: 2 KQYH-KFQREL--YCDLQGEN----IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHD 53 + Y ++E L+ E + + + + Q+ + VY+ + + +K Sbjct: 957 QLYSSTLKKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICDHPAVYFKDPESYKNHSS 1016 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQ 102 K A ++ + + ++V + + + + A QG++ ++ + Sbjct: 1017 GKWAAFVKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVQGKSQNRKEEIDR 1076 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1077 FSNDPNCRVFIGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQK 1130 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + + + +HV Sbjct: 1131 NTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1173 >gi|317968221|ref|ZP_07969611.1| SNF2 family DNA/RNA helicase [Synechococcus sp. CB0205] Length = 1039 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 70/224 (31%), Gaps = 32/224 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y K E + + + + K Q+ N ++ Sbjct: 802 KLYSKTVDESLDAIARAPLGQKHGQVLALLTKLKQICNHPALALKQDPADADASFFKEFA 861 Query: 52 -HDEKIKALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKD 97 K++ LE I+E+ ++ F + + + Sbjct: 862 ARSAKVQRLEEILEEVMEAGDRALLFTQFAEWGHLLKAHLEHKWRQEVPFLYGSTSKTER 921 Query: 98 PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + L + G GLNL + + WW+ +E R Sbjct: 922 QAMVDRFQDDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDR 975 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V V+ I +++E + + ++ KS + + ++ + + Sbjct: 976 AYRIGQQNRVMVHKFITSGSVEERIDRMIKEKSKLAEDIVGSGE 1019 >gi|172057599|ref|YP_001814059.1| non-specific serine/threonine protein kinase [Exiguobacterium sibiricum 255-15] gi|171990120|gb|ACB61042.1| Non-specific serine/threonine protein kinase [Exiguobacterium sibiricum 255-15] Length = 876 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 83/221 (37%), Gaps = 26/221 (11%) Query: 2 KQYH----KFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y K Q E L + + + + Q+ + E+ + K+ Sbjct: 647 KLYASYLAKLQLETLQHLDETKREDRIKLLAGLTRLRQICCDPALFVEDYTGE---STKL 703 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 + L +IE+ I++ + LAR+++ ++ + + Sbjct: 704 ERLLTLIEEKLAAGHRILIFSQYTKMLARIRERLAAQQRAHFLLTGETPVEDRVALCERF 763 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G++ L + G GLNL + ++ + WW+ Q R + G + Sbjct: 764 NAGEVDLFLISLKAGGTGLNL-ATADTVILYDSWWNPAVEQ-----QAADRAHRLGQQSP 817 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V L+ TI+E + + K+T+ D +L+ K + + + Sbjct: 818 VEVIKLLMTGTIEEKMAELQDRKATMIDAVLSDQKPDILTI 858 >gi|301062656|ref|ZP_07203283.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] gi|300443246|gb|EFK07384.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] Length = 895 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 72/210 (34%), Gaps = 24/210 (11%) Query: 3 QYHKFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y K ++ + +G + S +K Q+ N Y ++E K + L Sbjct: 669 LYGKLVQDIRGSILETEGIERKGM-ILSSLMKFKQICNHPDQYLGAGGFEEKESGKFQRL 727 Query: 60 EVII--EKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNE 106 I ++V F + K I+++ Sbjct: 728 RDICTTIYEKREKVLVFTQFKEMTQPLHDFLEDVFHGKGLILHGSVAVGKRKKIIEQFQS 787 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G +P + + G GLNL N ++ F WW+ +E R + G K+ V Sbjct: 788 PGYVPFMVLSLKAGGIGLNLTE-ANHVIHFDRWWNPA-----VENQATDRAFRIGQKKNV 841 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ + Q T++E + L KS + ++ Sbjct: 842 VVHKFLTQGTVEEKIDAMLEEKSRLSREVI 871 >gi|308446187|ref|XP_003087115.1| hypothetical protein CRE_23866 [Caenorhabditis remanei] gi|308262104|gb|EFP06057.1| hypothetical protein CRE_23866 [Caenorhabditis remanei] Length = 437 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 25/213 (11%) Query: 2 KQYHKFQ-------RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-EEKHWKEVHD 53 K Y + REL +G + S +K Q+ ++ + V Sbjct: 213 KLYEAVRATMQKNIRELIAA-KGFHRSQIQILSALLKLRQVCCHPSLLQLDQVKNQNVES 271 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQE 103 K+ L +++ I++ F + L +++ K I Sbjct: 272 AKLDHLLEMVQDMVEEGRKILIFSQFTTMLQLIEEHLKTLNIRNVKLTGQTKKRDEVITA 331 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G IP+ + G GLNL + ++ + WW+ E R + G + Sbjct: 332 FQAGDIPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----EDQASDRAWRIGQDK 385 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFVY LI +I+E +L + K+ + +L+ Sbjct: 386 PVFVYKLITNQSIEEKILALQKNKADLAKSILS 418 >gi|226360675|ref|YP_002778453.1| helicase [Rhodococcus opacus B4] gi|226239160|dbj|BAH49508.1| putative helicase [Rhodococcus opacus B4] Length = 947 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 69/214 (32%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y ++ ++ + + K Q+ N ++ + + K+ Sbjct: 713 LYRAVVDDMMAQIKDKKGMKRKGAVLAALTKLKQVCNHPAHFLRDGSAVMRRGQHRSGKL 772 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQE 103 +E I++ + ++ F G K + Sbjct: 773 GLVEDILDSVVADGEKALLFTQFREFGDLVVPYLAERFGTPVPFLHGGVPKQKRDDMVAS 832 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + P++ + G GLNL N +V WW+ +E R + G + Sbjct: 833 FQGDDGPPIMMLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQR 886 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V L+ T++E + + TK + DL + Sbjct: 887 RDVQVRKLVCVGTLEERIDAMIATKQELADLAVG 920 >gi|315504405|ref|YP_004083292.1| snf2-related protein [Micromonospora sp. L5] gi|315411024|gb|ADU09141.1| SNF2-related protein [Micromonospora sp. L5] Length = 1136 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 68/214 (31%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ + + Q+ N + + K++ L+ Sbjct: 906 LYRAVVDDMMAKIESSDGIERRGLVLATMTRLKQVCNHPAQLLHDGSALDGRSGKLERLD 965 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNEG 107 I+++ ++ + L+ G + + + Sbjct: 966 EIVDEVLAAEEKALLFTQYAEFGGMLRGHLSARTGREVLLLHGGVGKAERDAMVTRFQTP 1025 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + PL + G GL L N +V WW+ +E R + G +R V Sbjct: 1026 QGPPLFVLSLKAGGTGLTLTA-ANHVVHVDRWWNPA-----VEDQATDRAFRIGQRRRVQ 1079 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V + T++E V + K ++ ++ + ++ Sbjct: 1080 VRKFVCAGTVEEKVAAMIADKRSLARSVVGSGEQ 1113 >gi|302869123|ref|YP_003837760.1| SNF2-like protein [Micromonospora aurantiaca ATCC 27029] gi|302571982|gb|ADL48184.1| SNF2-related protein [Micromonospora aurantiaca ATCC 27029] Length = 1078 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 68/214 (31%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ + + Q+ N + + K++ L+ Sbjct: 848 LYRAVVDDMMAKIESSDGIERRGLVLATMTRLKQVCNHPAQLLHDGSALDGRSGKLERLD 907 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNEG 107 I+++ ++ + L+ G + + + Sbjct: 908 EIVDEVLAAEEKALLFTQYAEFGGMLRGHLSARTGREVLLLHGGVGKAERDAMVTRFQTP 967 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + PL + G GL L N +V WW+ +E R + G +R V Sbjct: 968 QGPPLFVLSLKAGGTGLTLTA-ANHVVHVDRWWNPA-----VEDQATDRAFRIGQRRRVQ 1021 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V + T++E V + K ++ ++ + ++ Sbjct: 1022 VRKFVCAGTVEEKVAAMIADKRSLARSVVGSGEQ 1055 >gi|315650529|ref|ZP_07903595.1| Snf2 family helicase [Eubacterium saburreum DSM 3986] gi|315487184|gb|EFU77500.1| Snf2 family helicase [Eubacterium saburreum DSM 3986] Length = 1142 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 21/200 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--A 66 +++ + N + ++ K Q+ ++ + K+ +++ Sbjct: 932 KKILLGDKDYNNKKMIVLAEITKLRQICCDPNLIFDDYSGE---SAKLDTCIDLVKSGIE 988 Query: 67 NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 I++ F+S L DK + ++N + Sbjct: 989 AGHKILLFSQFSSMLDIISKRFEKEKITSFMITGSTPKDKRLTLVNKFNHDDTNVFLISL 1048 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL G +I++ + WW+ R + G K V VY LIA+ TI Sbjct: 1049 KAGGTGLNLT-GADIVIHYDPWWNFAAQ-----NQATDRAHRIGQKNTVTVYRLIAKGTI 1102 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E +++ +K + D +LN Sbjct: 1103 EERIVKLQESKKDLADRVLN 1122 >gi|312128395|ref|YP_003993269.1| SNF2-like protein [Caldicellulosiruptor hydrothermalis 108] gi|311778414|gb|ADQ07900.1| SNF2-related protein [Caldicellulosiruptor hydrothermalis 108] Length = 1139 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 91/230 (39%), Gaps = 35/230 (15%) Query: 2 KQYHKF----QRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y +F ++E+ ++ G S + Q+ E+ K Sbjct: 917 KIYKQFLVSAKKEIEKEIDSAGFEKSQIKIFSLLTRLRQICCHPKLVFEDYK---GSSGK 973 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 ++AL+ I++ + +I+ + S L+ ++K + + L + Sbjct: 974 LEALKEILQDCLESGHRVIIYSQWTSMLSIIKKMLDKEKILYFYLDGATKAEDRVEMVNS 1033 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLN+ G ++++ F WW+ +E R + G K Sbjct: 1034 FNSGERNVFLLSLKAGGFGLNIT-GADVVIHFDAWWNPA-----VENQATARAHRLGQKN 1087 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--------LKKETIHV 205 V + +I +N+I+E +L + K + D L+ A K+E + + Sbjct: 1088 VVQSFKIITKNSIEEKILALQQKKKDLFDSLIEASQSFIGKFSKEEILEL 1137 >gi|54022998|ref|YP_117240.1| putative helicase [Nocardia farcinica IFM 10152] gi|54014506|dbj|BAD55876.1| putative helicase [Nocardia farcinica IFM 10152] Length = 956 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 73/217 (33%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y ++ L+ A A + Q+ N ++ + K+ Sbjct: 722 LYQAVVDDMLVKLRSAKGMARKGAVLGALTRLKQVCNHPAHFLGDGSPVLHRGRHRSGKL 781 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQE 103 +E +++ + ++ F G T ++ Sbjct: 782 ALVEDVLDTVVADGEKALLFTQFREFGDLLAPYLSERFGAPIPFLHGGVTKKNRDTMVER 841 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G P++ + G GL L N +V WW+ +E R + G + Sbjct: 842 FQSGDGPPVMLLSLKAGGTGLTLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQR 895 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R V V L+ +TI+E + + + KS + DL ++A + Sbjct: 896 RDVQVRKLVCVDTIEERIDEMITGKSRLADLAVDAGE 932 >gi|166154770|ref|YP_001654888.1| helicase [Chlamydia trachomatis 434/Bu] gi|166155645|ref|YP_001653900.1| helicase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336044|ref|ZP_07224288.1| helicase [Chlamydia trachomatis L2tet1] gi|165930758|emb|CAP04255.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis 434/Bu] gi|165931633|emb|CAP07209.1| putative helicase (SWF/SNF family) [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 1199 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 89/223 (39%), Gaps = 25/223 (11%) Query: 2 KQYH-KFQREL--YCDLQGEN----IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHD 53 + Y ++E L+ E + + + + Q+ + VY+ + + +K Sbjct: 954 QLYSSTLEKEKCQIQQLEKEEDPASVNYLHVFALLNQLKQICDHPAVYFKDPESYKNHSS 1013 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQ 102 K A ++ + + ++V + + + + A QG++ ++ + Sbjct: 1014 GKWAAFVKLLNDSLASGYKVVVFSQYIQMIRIIALYLEEHAIEYALVQGKSQNRKEEIDR 1073 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1074 FSNDPNCRVFIGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQK 1127 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + + + +HV Sbjct: 1128 NTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|262377834|ref|ZP_06071049.1| predicted protein [Acinetobacter lwoffii SH145] gi|262307224|gb|EEY88372.1| predicted protein [Acinetobacter lwoffii SH145] Length = 1115 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYD-EEKHWKEVHDE 54 K Y + + ++ +G +K Q+ + + + Sbjct: 889 KLYEAVRATMQANIQKIVAEKGFKRSQIQILDALLKLRQVCCHPSLLKLDSVKTGQAYSA 948 Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEW 104 K++ L ++ I++ F S L +++ K I + Sbjct: 949 KLEQLMDMVVPMVEEGRKILIFSQFTSMLELIEQQLYHAEIGYVKLTGKTKKRDEVITAF 1008 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G++P+ + G GLNL + ++ + WW+ E R + G + Sbjct: 1009 QSGQVPVFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----EDQASDRAWRIGQDKP 1062 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFVY LI +I+E ++ + K+ + +L+ Sbjct: 1063 VFVYKLITNKSIEEKIIALQQNKAELAQSILS 1094 >gi|218440726|ref|YP_002379055.1| non-specific serine/threonine protein kinase [Cyanothece sp. PCC 7424] gi|218173454|gb|ACK72187.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 7424] Length = 1048 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 68/215 (31%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAV-YYDEEKHWKEVHDEKIKAL 59 Y K + ++ + ++ Q+ N YY E K+ L Sbjct: 815 LYQKLVDDSLAKIEETTGIQRRGLILTLLMQLKQVCNHPAQYYKENSLDSAQRSGKLLRL 874 Query: 60 EVIIEKAN--AAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNE 106 E ++E+ ++ F L R + I + Sbjct: 875 EEMLEELVDEGDRALIFTQFAEWGKLLQPYLTKKLGRQVLFLYGATPRQQRQEMIDRFQN 934 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P+ + G GLNL N + WW+ +E R + G K+ Sbjct: 935 DPAAPPIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPA-----VENQATDRAFRIGQKQN 988 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ I T++E + + +K + + ++A + Sbjct: 989 VQVHKFICTGTLEEKINDMIESKKQLAEQTVDAGE 1023 >gi|158312364|ref|YP_001504872.1| non-specific serine/threonine protein kinase [Frankia sp. EAN1pec] gi|158107769|gb|ABW09966.1| Non-specific serine/threonine protein kinase [Frankia sp. EAN1pec] Length = 617 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 69/210 (32%), Gaps = 23/210 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + + G IE + Q+ N Y E K Sbjct: 386 RLYREAVDRAFTEGLGAGIERSGRVLALLTALKQICNHPAQYLREDTATPGRSGKFDRAT 445 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARL------------QKAFPQGRTLDKDPCTIQEWN- 105 ++ + ++V + + L G ++ + + + Sbjct: 446 EMLSEVVEQDDRVLVFTQYRAMGKLLSRYLGTALGVGLVPFLHGGLSMQRRDELVHAFQE 505 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P+L + G GLNL + ++ + WW+ +E R + G R Sbjct: 506 DDDAPPVLLLSLRAAGFGLNLTR-ASHVMHYDRWWNPA-----VEEQATDRAHRIGQSRT 559 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + VY L+ TI++ + Q K + +++ Sbjct: 560 LNVYTLVTGGTIEDHIAQMHENKRGVAEIV 589 >gi|213692059|ref|YP_002322645.1| SNF2-related protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523520|gb|ACJ52267.1| SNF2-related protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 464 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 11/206 (5%) Query: 4 YHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVY---YDEEKHWKEVHDEKIKAL 59 Y + +R++ DL + A N+ T K QL G +Y D E + V D K+ AL Sbjct: 264 YDRLRRQMVADLDDGTTVTAANAGVLTAKLAQLTCGCLYPDADDPEGTIRHVDDVKLDAL 323 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II A+ P++V Y F +L R++ FP R + + ++EW G++PLL AHP + Sbjct: 324 ADIIGAADG-PVLVFYQFTDELERMRARFPGMREVHE-QGVLEEWRNGRVPLLAAHPQAA 381 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GLN+Q GG+ +V+ SL W +++ R R + G KR V V+ L+ NT+D Sbjct: 382 KYGLNIQDGGHEIVWTSLPWSFDDY-----RQACDRLHRQGQKRTVRVHRLLESNTVDRR 436 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 L L + + + +++A++ ET + Sbjct: 437 KLDVLTGRMMLHEAVMDAVEGETTGI 462 >gi|167629617|ref|YP_001680116.1| snf2 family helicase, putative [Heliobacterium modesticaldum Ice1] gi|167592357|gb|ABZ84105.1| snf2 family helicase, putative [Heliobacterium modesticaldum Ice1] Length = 1006 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 69/221 (31%), Gaps = 29/221 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH--DEKIKA 58 Y + ++ A S + QL N +E + K++ Sbjct: 770 LYESVLQAAMEKIEESTGIARRGAILSTLTQLKQLCNHPTLLLKEGKASVLRGRSHKVER 829 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L ++E+ +V + L++ G + I+ + Sbjct: 830 LVEMVEELRQEGERCLVFTQYVETGHLLKETLEAALGEEVLFLHGGTPASQREKMIERFQ 889 Query: 106 EGK------IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G GLNL N + WW+ +E R + Sbjct: 890 QSDPSPGKGCGVFLLSLKAGGTGLNLTA-ANHVFHVDRWWNPA-----VENQATDRAYRI 943 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G R V V+ I T++E + + + K + + ++ ++ Sbjct: 944 GQSRNVHVHKFITLGTLEERIDEMIERKQGLSEEVIGGGEQ 984 >gi|89097017|ref|ZP_01169908.1| helicase, SWF/SNF family protein [Bacillus sp. NRRL B-14911] gi|89088397|gb|EAR67507.1| helicase, SWF/SNF family protein [Bacillus sp. NRRL B-14911] Length = 1061 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 73/213 (34%), Gaps = 27/213 (12%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + + L + + + + Q+ + + K Sbjct: 838 KLYAAYLAKLRHDTLKHLDKDTLRKNKIRILAGLTRLRQICCHPALFVDGYK---GSSAK 894 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQE 103 + L II+++ + +++ F L + ++ Sbjct: 895 YEQLLQIIKESRLSGRRVLIFSQFTKMLDMIGRELARQGIGFFYLDGQTPSEERVKLCGR 954 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + G GLNL G + ++ + LWW+ +E R + G + Sbjct: 955 FNSGEHDFFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VENQAADRAYRMGQRH 1008 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+A+ TI+E + + K + + ++ Sbjct: 1009 NVQVIKLLARGTIEEKMNELQDKKRNLIEEVIE 1041 >gi|15618744|ref|NP_225030.1| SWI/SNF family helicase_1 [Chlamydophila pneumoniae CWL029] gi|16752203|ref|NP_445571.1| Snf2/Rad54 family helicase [Chlamydophila pneumoniae AR39] gi|33242195|ref|NP_877136.1| SNF protein [Chlamydophila pneumoniae TW-183] gi|4377149|gb|AAD18973.1| SWI/SNF family helicase_1 [Chlamydophila pneumoniae CWL029] gi|7189947|gb|AAF38809.1| helicase, Snf2/Rad54 family [Chlamydophila pneumoniae AR39] gi|33236706|gb|AAP98793.1| SNF protein [Chlamydophila pneumoniae TW-183] Length = 1215 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 87/222 (39%), Gaps = 24/222 (10%) Query: 2 KQYH---KFQRELYCDLQGENIEAFN---SASKTVKCLQLANGA-VYYDEEKHWKEVHDE 54 K Y + ++ L+ A N + Q+ + V++ + +K Sbjct: 958 KLYMATLQREKSHIQKLETPEEPATNFLHIFALLNHLKQICDHPAVFFKDPDQYKNYESG 1017 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQE 103 K A ++++ ++V + + + + A QG++L++ Sbjct: 1018 KWNAFVKLLKESLNAGYKVVVFSQYIHMIRIITLYLEEIGIKYASIQGKSLNRKEEIETF 1077 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1078 TTDPNCQVFVGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQKN 1131 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y LI ++T++E + + K + D ++ + +H+ Sbjct: 1132 TVFIYKLITEDTLEERIHYLIEKKIRLLDKVIASQDSNILHM 1173 >gi|322411161|gb|EFY02069.1| SWF/SNF family helicase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 1030 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 77/212 (36%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + + D+ IE S + Q+ + + + + K+++L Sbjct: 816 QMHDQIRTASDADINRRKIE---ILSGITRLRQICDTPSLFMDY----DGESGKLESLRT 868 Query: 62 II--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ K N ++ F L + ++ + +N G Sbjct: 869 LLLQIKENGHRALIFSQFRGMLDLAKQEMDALGLTAYQMTGSTPANERQEMTRAFNNGSK 928 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL G + +V LWW+ ++R + G + V VY Sbjct: 929 DVFLISLKAGGVGLNLT-GADTVVLIDLWWNPAVEM-----QAISRAHRIGQEDNVEVYR 982 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 983 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1014 >gi|111018558|ref|YP_701530.1| helicase [Rhodococcus jostii RHA1] gi|110818088|gb|ABG93372.1| probable helicase [Rhodococcus jostii RHA1] Length = 961 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 70/214 (32%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y ++ ++ + + K Q+ N ++ + + K+ Sbjct: 727 LYRAVVDDMMAQIKDKKGMKRKGAVLAALTKLKQVCNHPAHFLRDGSAVMRRGQHRSGKL 786 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQE 103 +E I++ + ++ F G + K + Sbjct: 787 GLVEDILDSVVADGEKALLFTQFREFGDLVTPYLAERFGTPVPFLHGGVSKQKRDDMVAS 846 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + P++ + G GLNL N +V WW+ +E R + G + Sbjct: 847 FQGDDGPPIMMLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRAFRIGQR 900 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V L+ T++E + + TK + DL + Sbjct: 901 RDVQVRKLVCVGTLEERIDAMIATKQELADLAVG 934 >gi|66395514|ref|YP_239930.1| ORF006 [Staphylococcus phage 42E] gi|215401142|ref|YP_002332397.1| putative helicase [Staphylococcus phage phiSauS-IPLA35] gi|62636007|gb|AAX91118.1| ORF006 [Staphylococcus phage 42E] gi|215260493|gb|ACJ64623.1| gp34 [Staphylococcus phage phiSauS-IPLA35] Length = 455 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y + +E+HD+K++ LE Sbjct: 257 KLYDELEKHYILESEEDGTVVAQNGASLSQKLLQLSNGAV-YTDNGDVREIHDKKLEKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIMHHIMTDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARI 451 >gi|227548395|ref|ZP_03978444.1| helicase [Corynebacterium lipophiloflavum DSM 44291] gi|227079533|gb|EEI17496.1| helicase [Corynebacterium lipophiloflavum DSM 44291] Length = 1039 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 73/223 (32%), Gaps = 26/223 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y R+ +L+ A + + Q+ N ++ + + K+ Sbjct: 807 LYTALVRDAQAELEEREGMARKGMVLATITRIKQICNHPAHFLGDGSAVTLKGKHRSGKV 866 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 L ++ + + +++ + + L G + D + Sbjct: 867 AMLMELLGEAINSEQRVLIFTQYKAFGALLQPYLSERLGEPVPFLHGGVSKDARDAMVDS 926 Query: 104 WNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G + + G GLNL ++++ WW+ +E R + G Sbjct: 927 FQSVGGPRAMLLSLKAGGTGLNLTA-ASVVIHLDRWWNPA-----VENQATDRAYRIGQD 980 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V VY +I + T++E + L K + ++ + + Sbjct: 981 KNVTVYKMITRGTLEESIQDVLDGKMHLAGTVVGEGEGWITEL 1023 >gi|222528487|ref|YP_002572369.1| non-specific serine/threonine protein kinase [Caldicellulosiruptor bescii DSM 6725] gi|222455334|gb|ACM59596.1| Non-specific serine/threonine protein kinase [Caldicellulosiruptor bescii DSM 6725] Length = 1139 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 87/214 (40%), Gaps = 27/214 (12%) Query: 2 KQYHKF----QRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y +F ++E+ ++ G S + Q+ E+ K Sbjct: 917 KIYKQFLVSAKKEIEKEIDSVGFEKSQIKIFSLLTRLRQICCHPKLVFEDYK---GSSGK 973 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 ++AL+ I++ + +I+ + S L+ ++K + + L + Sbjct: 974 MEALKEILQDSLESGHRVIIYSQWTSMLSIIKKMLDKEKILYFYLDGATKAEDRVEMVNR 1033 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLN+ G ++++ F WW+ +E R + G K Sbjct: 1034 FNSGERNVFLLSLKAGGFGLNIT-GADVVIHFDAWWNPA-----VENQATARAHRLGQKN 1087 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V + +IA+N+I+E +L + K + D L+ A Sbjct: 1088 VVQSFKIIAKNSIEEKILALQQKKKDLFDSLIEA 1121 >gi|331003253|ref|ZP_08326760.1| hypothetical protein HMPREF0491_01622 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412906|gb|EGG92286.1| hypothetical protein HMPREF0491_01622 [Lachnospiraceae oral taxon 107 str. F0167] Length = 1137 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 72/200 (36%), Gaps = 21/200 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--A 66 +E+ + N S+ K Q+ E K++ +++ Sbjct: 927 KEVLEGDKEYNSSKMIILSEITKLRQICCDPGLIFENYS---GGAAKLETCVDLVKSGIE 983 Query: 67 NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 I++ F S L ++ + +K + ++N + Sbjct: 984 AGHKILLFSQFTSMLDIIEKRFKEENISSYMITGSTSKEKRIQLVNDFNNDDTNVFLISL 1043 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL G +I++ + WW+ R + G K V VY LI + TI Sbjct: 1044 KAGGTGLNL-VGADIVIHYDPWWNFAAQ-----NQATDRAHRIGQKNNVTVYRLITKGTI 1097 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E +++ +K + D +LN Sbjct: 1098 EERIVKLQESKKDLADRVLN 1117 >gi|254445212|ref|ZP_05058688.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] gi|198259520|gb|EDY83828.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] Length = 917 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 69/209 (33%), Gaps = 22/209 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + EL DL+ + ++ Q+ N + +K K L+ Sbjct: 688 LYKRTVEELAKDLREVEGIQRRGLVLTYLMRFKQICNHPSQALGDNGYKPDASGKFTRLQ 747 Query: 61 VIIEKAN--AAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 + E +++ F R G + + + + Sbjct: 748 ELCEDIAARQEKVLIFTQFREMTAPIAQHLATIFGREGLVLHGGTPVAQRKALVDSFQSP 807 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + G GL L + ++ F WW+ +E R + G K+ V Sbjct: 808 DGPPFFVLSLKAGGSGLTLTA-ASHVIHFDRWWNPA-----VENQATDRAYRIGQKKNVL 861 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ I++ TI+E V +++K + LL Sbjct: 862 VHKFISRGTIEEKVDTLIQSKLALSTELL 890 >gi|160935631|ref|ZP_02083006.1| hypothetical protein CLOBOL_00521 [Clostridium bolteae ATCC BAA-613] gi|158441375|gb|EDP19085.1| hypothetical protein CLOBOL_00521 [Clostridium bolteae ATCC BAA-613] Length = 1075 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 71/186 (38%), Gaps = 21/186 (11%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS 79 ++ ++ Q+ + K++ ++ + A I++ F S Sbjct: 877 KLQILAELMRLRQICCDPRLCYDNYR---GSSAKLETCMDLVRRGVAGGHKILLFSQFTS 933 Query: 80 DLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 L + + ++ + ++ + ++P+ + G GLNL Sbjct: 934 MLDIIHTRFEKEGIMSHMLTGATSKEERIRLVGDFGKDEVPVFLISLKAGGTGLNLTA-A 992 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 +I++ + WW++ R + G + V VY LI +NTI+E +L+ KS Sbjct: 993 DIVIHYDPWWNVAAQ-----NQATDRTHRIGQDKQVTVYKLITRNTIEENILKLQEAKSH 1047 Query: 190 IQDLLL 195 + D ++ Sbjct: 1048 LADAVV 1053 >gi|238060401|ref|ZP_04605110.1| non-specific serine/threonine protein kinase [Micromonospora sp. ATCC 39149] gi|237882212|gb|EEP71040.1| non-specific serine/threonine protein kinase [Micromonospora sp. ATCC 39149] Length = 795 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 63/214 (29%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ + + Q+ N + K+ LE Sbjct: 565 LYQAVVDDMLARIESSDGIERRGLVLAAMTRLKQVCNHPAQLLRDGSALTGRSGKLARLE 624 Query: 61 VIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 I+++ ++ + R G + + + Sbjct: 625 EILDEVLAAGEKALLFTQYAEFGGMLRGHLSARFGREVLFLHGGVGKADRDAMVTRFQSD 684 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 PL + G GL L N +V WW+ +E R + G +R V Sbjct: 685 AGPPLFVLSLKAGGTGLTLTA-ANHVVHVDRWWNPA-----VEDQATDRAFRIGQRRRVQ 738 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V + T++E V + K ++ ++ ++ Sbjct: 739 VRKFVCAGTLEEKVAAMIAEKRSLAASVVGTGEQ 772 >gi|261420703|ref|YP_003254385.1| SNF2-related protein [Geobacillus sp. Y412MC61] gi|319768373|ref|YP_004133874.1| SNF2-related protein [Geobacillus sp. Y412MC52] gi|261377160|gb|ACX79903.1| SNF2-related protein [Geobacillus sp. Y412MC61] gi|317113239|gb|ADU95731.1| SNF2-related protein [Geobacillus sp. Y412MC52] Length = 924 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 74/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + + + + A Q+ + Y +E+ +++ K++ Sbjct: 693 LYEQLVNDTLERAKEASPFARRGLILQMLNGVKQICDHPALYLKERRPRQLVERSHKLEK 752 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +IE+ N ++ + +Q+ G + E+ Sbjct: 753 LIELIEQIRTNDESCLIFTQYVRMGEMIQELLSDLFDEPVLFLHGGVPKQTRDRMVDEFQ 812 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K P+ + G GLNL N ++ F WW+ +E R + G + V Sbjct: 813 AKKAPIFLLSLKAGGTGLNLTA-ANHVIHFDRWWNPA-----VENQATDRAYRIGQTKFV 866 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI TI+E + + L K + DL+ Sbjct: 867 HVHKLITIGTIEEKIDEMLEQKQALADLITEG 898 >gi|269302622|gb|ACZ32722.1| SNF2/helicase domain protein [Chlamydophila pneumoniae LPCoLN] Length = 1215 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 87/222 (39%), Gaps = 24/222 (10%) Query: 2 KQYH---KFQRELYCDLQGENIEAFN---SASKTVKCLQLANGA-VYYDEEKHWKEVHDE 54 K Y + ++ L+ A N + Q+ + V++ + +K Sbjct: 958 KLYMATLQREKSHIQKLETPEEPATNFLHIFALLNHLKQICDHPAVFFKDPDQYKNYESG 1017 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQE 103 K A ++++ ++V + + + + A QG++L++ Sbjct: 1018 KWNAFVKLLKESLNAGYKVVVFSQYIHMIRIITLYLEEIGIKYASIQGKSLNRKEEIETF 1077 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1078 TTDPNCQVFVGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQKN 1131 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y LI ++T++E + + K + D ++ + +H+ Sbjct: 1132 TVFIYKLITEDTLEERIHYLIEKKIRLLDKVIASQDSNILHM 1173 >gi|297583264|ref|YP_003699044.1| SNF2-like protein [Bacillus selenitireducens MLS10] gi|297141721|gb|ADH98478.1| SNF2-related protein [Bacillus selenitireducens MLS10] Length = 1102 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 72/193 (37%), Gaps = 21/193 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 G + + QL + E+ + K+ L+ ++ N +++ Sbjct: 899 DGFQESRMKILAGLTRLRQLCCHPSLFIEDYKGE---SGKLNDLKELVANAVENGRRLLI 955 Query: 74 AYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 F+S L ++ + +N+G+ L + G GL Sbjct: 956 FSQFSSMLTMMKDVLEEEGYSLFYLDGQTPGKDRVDMAERFNQGEKELFLISLKAGGTGL 1015 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL G +++V + LWW+ +E R + G K+ V V ++++ TI+E + Sbjct: 1016 NL-PGADLVVLYDLWWNPA-----VEEQAAGRAHRMGQKKVVQVIRMVSEGTIEEKIHAL 1069 Query: 184 LRTKSTIQDLLLN 196 + K + D ++ Sbjct: 1070 QQRKRELIDTVIQ 1082 >gi|320458171|dbj|BAJ68792.1| hypothetical phage protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 460 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 11/206 (5%) Query: 4 YHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVY---YDEEKHWKEVHDEKIKAL 59 Y + +R++ DL + A N+ T K QL G +Y D E + V D K+ AL Sbjct: 260 YDRLRRQMVADLDDGTTVTAANAGVLTAKLAQLTCGCLYPDADDPEGTIRHVDDVKLDAL 319 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II A+ P++V Y F +L R++ FP R + + ++EW G++PLL AHP + Sbjct: 320 ADIIGAADG-PVLVFYQFTDELERMRARFPGMREVHE-QGVLEEWRNGRVPLLAAHPQAA 377 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GLN+Q GG+ +V+ SL W +++ R R + G KR V V+ L+ NT+D Sbjct: 378 KYGLNIQDGGHEIVWTSLPWSFDDY-----RQACDRLHRQGQKRTVRVHRLLESNTVDRR 432 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 L L + + + +++A++ ET + Sbjct: 433 KLDVLTGRMMLHEAVMDAVEGETTGI 458 >gi|254443940|ref|ZP_05057416.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] gi|198258248|gb|EDY82556.1| SNF2 family N-terminal domain protein [Verrucomicrobiae bacterium DG1235] Length = 1069 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 73/186 (39%), Gaps = 19/186 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 E FN + ++ Q+ + +V K++ L ++ + +++ F Sbjct: 872 ERFNILASLLRLRQICCHPALISP--EYAKVRSAKLEGLVDLVSELQEEGHKVLIFSQFV 929 Query: 79 SDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 L + + G+T +++ Q N+ + + G GLNL Sbjct: 930 EMLKIISESLKGIDCKHLTLTGQTKNREELVDQFQNDETVTAFLLSLRAAGSGLNLTA-A 988 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + +V + WW+ +E + R + G K V Y LIA++++++ + K + Sbjct: 989 SYVVLYDPWWNPA-----VEAQAIDRTHRIGQKNTVNAYRLIAKDSVEQKIQSLQVKKES 1043 Query: 190 IQDLLL 195 + + ++ Sbjct: 1044 LANEIV 1049 >gi|283469596|emb|CAQ48807.1| SNF2 family N-domain protein [Staphylococcus aureus subsp. aureus ST398] Length = 452 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y + +E+HD+K++ LE Sbjct: 254 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDNGDVREIHDKKLEKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G +++++ NTID+ V Sbjct: 372 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARI 448 >gi|330889124|gb|EGH21785.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. mori str. 301020] Length = 914 Score = 121 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 686 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 745 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 746 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 805 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 806 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 859 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 860 ARGTVEEKIQRLQREKSALASGVLDG 885 >gi|255037622|ref|YP_003088243.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] gi|254950378|gb|ACT95078.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] Length = 1261 Score = 121 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 82/211 (38%), Gaps = 21/211 (9%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y F+ ++ +G N +F +K Q+ + ++ + + Sbjct: 1039 KVYDTFRERYRQEIAEKLATEGLNKSSFLILEALLKLRQICDSPSILSGDEDFGNESAKL 1098 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNE 106 + I E A+ I++ F L ++K + G+T+D+ + N+ Sbjct: 1099 EEITREIEENASNHKILIFSQFLGMLDLIRKHLEKMNIPYEYLDGQTVDRAGRVNRFQND 1158 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL + + WW+ +ER + R + G R VF Sbjct: 1159 DTCRVFLMSLKAGGVGLNLTE-ADYVYLVDPWWNPA-----VERQAIDRTHRIGQTRKVF 1212 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y +I ++TI+E +L + K + + L+ Sbjct: 1213 AYKMICKDTIEEKILLLQQRKQDLAEDLVGG 1243 >gi|323692122|ref|ZP_08106366.1| hypothetical protein HMPREF9475_01229 [Clostridium symbiosum WAL-14673] gi|323503809|gb|EGB19627.1| hypothetical protein HMPREF9475_01229 [Clostridium symbiosum WAL-14673] Length = 1079 Score = 121 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 78/211 (36%), Gaps = 26/211 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y +L L+ + A ++ + QL E + + K+ Sbjct: 857 ELYRAAALKLRQSLEEDEKTAETSGKFQILAELTRLRQLCCDPSLCFERYNGE---SAKL 913 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 + ++ + I++ F S L + + T ++ + + Sbjct: 914 ETCVSLLLSAAESGHKILLFSQFASMLGIIGNRLKKEGIPFYLLTGSTTKEERNKMVNAF 973 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++P+ + G GLNL +I++ + WW++ R + G ++ Sbjct: 974 HRDQVPVFLISLKAGGTGLNLTA-ADIVIHYDPWWNVAAQ-----NQATDRAHRIGQEKQ 1027 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY LI ++TI+E +L K + D ++ Sbjct: 1028 VTVYKLIMKDTIEENILNLQEAKKNLADQIV 1058 >gi|270285639|ref|ZP_06195033.1| SNF2 family helicase [Chlamydia muridarum Nigg] gi|270289648|ref|ZP_06195950.1| SNF2 family helicase [Chlamydia muridarum Weiss] gi|301337035|ref|ZP_07225237.1| SNF2 family helicase [Chlamydia muridarum MopnTet14] Length = 1199 Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 90/223 (40%), Gaps = 25/223 (11%) Query: 2 KQY-HKFQREL--YCDLQGEN----IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHD 53 + Y ++E L+ E+ + + + + Q+ + +Y+ + + +K Sbjct: 954 QLYASTLKKEKCQIQQLEKEDDPAAVNYLHVFALLNQLKQICDHPAIYFKDPESYKNYAS 1013 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQ 102 K A ++ + + ++V + + + Q A QG++ ++ + Sbjct: 1014 GKWAAFVKLLNDSLASGYKVVVFSQYIQMIRIISLYLEEQNIQYALVQGKSQNRKEEIDR 1073 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1074 FSNDPNCRVFIGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQK 1127 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + + + +HV Sbjct: 1128 NTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1170 >gi|323438429|gb|EGA96184.1| phage helicase [Staphylococcus aureus O11] Length = 452 Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 113/202 (55%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y ++ + +HD+K++ LE Sbjct: 254 KLYDELEKHYILESEEDGTVVAQNGASLSQKLLQLSNGAV-YTDDGDVRGIHDKKLEKLE 312 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 313 EIIEESQGQPILLFYNFKHDKERILERFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 371 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V F L W LE +Q R + G +++L+ NTID+ V Sbjct: 372 HGLNLQQGGHIIVSFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHLMTDNTIDQRV 426 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 427 YKALQNKELTQEELMKAIKARI 448 >gi|257791730|ref|YP_003182336.1| Non-specific serine/threonine protein kinase [Eggerthella lenta DSM 2243] gi|317487799|ref|ZP_07946392.1| SNF2 family domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325831768|ref|ZP_08164957.1| SNF2 family N-terminal domain protein [Eggerthella sp. HGA1] gi|257475627|gb|ACV55947.1| Non-specific serine/threonine protein kinase [Eggerthella lenta DSM 2243] gi|316913074|gb|EFV34590.1| SNF2 family domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325486437|gb|EGC88887.1| SNF2 family N-terminal domain protein [Eggerthella sp. HGA1] Length = 1089 Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 30/217 (13%) Query: 2 KQY----HKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVH 52 + Y + + L N + F+ ++ K QL E H Sbjct: 863 RLYAAHEQQLRDALTLQKNNRNNKQFHERKVEVLAELTKLRQLCCDPRLLYENYA---GH 919 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCT 100 K+ A+ I+E +V F S L+ + Sbjct: 920 AAKLDAIAEIVESAMDAGEKTLVFSQFTSFLSLIAEVLDAHGVPYFTITGTTPKKRRLDL 979 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +N+ P+ + G GLNL G +++V WW+ R + G Sbjct: 980 VNAFNDDDTPVFLVSLKAGGTGLNLT-GASVVVHADPWWNAAAQ-----NQATDRAHRIG 1033 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ +IA++T++E +L K+ + D ++ A Sbjct: 1034 QTQVVSVHKVIAKDTVEERILHLQDAKTDLADQVIGA 1070 >gi|300781455|ref|ZP_07091309.1| chromodomain helicase [Corynebacterium genitalium ATCC 33030] gi|300533162|gb|EFK54223.1| chromodomain helicase [Corynebacterium genitalium ATCC 33030] Length = 1006 Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 71/223 (31%), Gaps = 26/223 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y + +L+ A + Q+ N +Y + K+ Sbjct: 773 LYTALVNAMQKELESRTGMARKGLVLSTITRIKQICNHPAHYQADGSPVTDKGKHRSGKV 832 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 L ++++ ++V + + L G + + ++ Sbjct: 833 AMLMELLDQAIETDQRVLVFTQYKAFGDILQPYLSDRLGHEIPFLHGGLSKTQRDTMVER 892 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + + G GLNL ++++ WW+ +E R + G Sbjct: 893 FQDPNGPRAMILSLRAGGTGLNLTA-ASMVIHMDRWWNPA-----VENQATDRAYRIGQN 946 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R V VY +I + T++E + L K + ++ + + Sbjct: 947 RNVQVYKMITRGTMEESIQDILDGKLKLAGAVVGEGEGWITEL 989 >gi|295699426|ref|YP_003607319.1| SNF2-related protein [Burkholderia sp. CCGE1002] gi|295438639|gb|ADG17808.1| SNF2-related protein [Burkholderia sp. CCGE1002] Length = 1172 Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 77/219 (35%), Gaps = 32/219 (14%) Query: 3 QYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKE------ 50 Y Q+++ + + + + +K Q+ + + Sbjct: 931 LYETVRTAMQQKVRAAVSAQGLARSHIIVLDALLKLRQVCCDPRLVRTASGFTDGAATGG 990 Query: 51 ----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDK 96 + K+ L ++ + +++ F LA + + Sbjct: 991 GERAMRSAKLDLLLSMLPELIEEGRRVLLFSQFTGMLALIAQALDEAAIPYAMLTGDTTD 1050 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + +G++PL + G GLNL + ++ + WW+ E R Sbjct: 1051 RVTPVERFQQGEVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRA 1104 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + VFVY LIA +I+E +++ K+ + D +L Sbjct: 1105 HRLGQDKPVFVYKLIAAGSIEEKIVELQEHKAGLADSIL 1143 >gi|224368240|ref|YP_002602403.1| SNF2-related helicase [Desulfobacterium autotrophicum HRM2] gi|223690956|gb|ACN14239.1| SNF2-related helicase [Desulfobacterium autotrophicum HRM2] Length = 903 Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 71/211 (33%), Gaps = 23/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y F ++L L+ + S VK Q+ N Y + K L Sbjct: 674 LYMDFVKKLADKLECSDPGIQRKGLVLSALVKFKQICNHPDQYLGTGDFIPKESGKFTRL 733 Query: 60 EVIIEKAN--AAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN- 105 I + ++V F + + K I+E+ Sbjct: 734 MEICATIHAKRERVLVFTQFKEMVAPLAEFLETVFHQKGHIIHGSLNVKKRHQAIEEFQG 793 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + IP + + G GLNL N ++ F WW+ IE R + G R V Sbjct: 794 KAYIPFMVISLKAGGTGLNLTR-ANHVIHFDRWWNPA-----IENQATDRAFRIGQTRGV 847 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ I + TI+E + + K + + +++ Sbjct: 848 LVHKFITRGTIEEKIDLMIEKKKALTNQIIS 878 >gi|323486739|ref|ZP_08092059.1| SNF2 family Superfamily II DNA/RNA helicase [Clostridium symbiosum WAL-14163] gi|323399958|gb|EGA92336.1| SNF2 family Superfamily II DNA/RNA helicase [Clostridium symbiosum WAL-14163] Length = 1059 Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 78/211 (36%), Gaps = 26/211 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y +L L+ + A ++ + QL E + + K+ Sbjct: 837 ELYRAAALKLRQSLEEDEKTAETSGKFQILAELTRLRQLCCDPSLCFERYNGE---SAKL 893 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 + ++ + I++ F S L + + T ++ + + Sbjct: 894 ETCVSLLLSAAESGHKILLFSQFASMLGIIGNRLKKEGIPFYLLTGSTTKEERNKMVNAF 953 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++P+ + G GLNL +I++ + WW++ R + G ++ Sbjct: 954 HRDQVPVFLISLKAGGTGLNLTA-ADIVIHYDPWWNVAAQ-----NQATDRAHRIGQEKQ 1007 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY LI ++TI+E +L K + D ++ Sbjct: 1008 VTVYKLIMKDTIEENILNLQEAKKNLADQIV 1038 >gi|300778365|ref|ZP_07088223.1| Snf2 family protein [Chryseobacterium gleum ATCC 35910] gi|300503875|gb|EFK35015.1| Snf2 family protein [Chryseobacterium gleum ATCC 35910] Length = 1113 Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 74/208 (35%), Gaps = 21/208 (10%) Query: 2 KQYHKFQRELYCDL-----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y +++EL + N + + + + Q+ N V E + +I Sbjct: 890 KIYDAYEKELREFVAANDDDDLNKNSMHVLTGLTRLRQICNSPVLMKEGYSGENAVKIEI 949 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEG 107 E I+ K+ I+V F L ++ + G+T D+ N Sbjct: 950 L-TEQILGKSKDHKILVFSQFVGMLDLIKAELEQHNIGYEYLTGQTKDRGEKVTHFQNNE 1008 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I + + G GLNL + + WW+ E + R + G + V Sbjct: 1009 DIRVFLISLKAGGVGLNLTQ-ADYIYLVDPWWNPAA-----ENQAIDRSYRIGQTKNVIA 1062 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +I NT++E +L + K + LL Sbjct: 1063 IRMICSNTVEEKILTLQKKKKQLAQNLL 1090 >gi|302184809|ref|ZP_07261482.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. syringae 642] Length = 880 Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 652 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 711 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 712 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 771 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 772 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 825 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 826 ARGTVEEKIQRLQREKSALASGVLDG 851 >gi|226313275|ref|YP_002773169.1| hypothetical protein BBR47_36880 [Brevibacillus brevis NBRC 100599] gi|226096223|dbj|BAH44665.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 1090 Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 27/212 (12%) Query: 2 KQY----HKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + Q+E L +G + + Q+ + +E K Sbjct: 867 KLYVAYLAQLQQETVKHLYNKGFQKNRIKILAGLTRLRQICCHPALFVKEYD---GGSAK 923 Query: 56 IKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 ++ L I+ + +++ F L + + + Sbjct: 924 LEQLFEILGECKNAGKRVLLFSQFTEMLGMIGRELGYHGVPFFYLDGQTPVAERLDLCNR 983 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLN+ G + ++ + LWW+ Q R + G K Sbjct: 984 FNEGERDLFLMSLKAGGTGLNVT-GADTVILYDLWWNPAVEQ-----QAADRAHRIGQKN 1037 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V L+A+ T++E + + + K + + ++ Sbjct: 1038 VVQVIRLVAEGTVEEKMYELQQKKKNLIEEII 1069 >gi|330954490|gb|EGH54750.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae Cit 7] Length = 914 Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 686 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 745 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 746 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 805 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 806 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 859 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 860 ARGTVEEKIQRLQREKSALASGVLDG 885 >gi|15836368|ref|NP_300892.1| SWI/SNF family helicase_1 [Chlamydophila pneumoniae J138] gi|8979209|dbj|BAA99043.1| SWI/SNF family helicase_1 [Chlamydophila pneumoniae J138] Length = 1215 Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 87/222 (39%), Gaps = 24/222 (10%) Query: 2 KQYH---KFQRELYCDLQGENIEAFN---SASKTVKCLQLANGA-VYYDEEKHWKEVHDE 54 K Y + ++ L+ A N + Q+ + V++ + +K Sbjct: 958 KLYMATLQREKSHIQKLETPEEPATNFLHIFALLNHLKQICDHPAVFFKDPDQYKNYESG 1017 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQE 103 K A ++++ ++V + + + + A QG++L++ Sbjct: 1018 KWNAFVKLLKESLNAGYKVVVFSQYIHMIRIITLYLEEIGIKYASIQGKSLNRKEEIETF 1077 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1078 TTDPNCQVFVGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----EIQALDRVHRIGQKN 1131 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y LI ++T++E + + K + D ++ + +H+ Sbjct: 1132 TVFIYKLITEDTLEERIHYLIEKKIRLLDKVIASQDSNILHM 1173 >gi|297531489|ref|YP_003672764.1| SNF2-related protein [Geobacillus sp. C56-T3] gi|297254741|gb|ADI28187.1| SNF2-related protein [Geobacillus sp. C56-T3] Length = 924 Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 74/209 (35%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + + + + A Q+ + Y +E+ +++ K++ Sbjct: 693 LYEQLVNDTLERAKEASPFARRGLILQMLNGVKQICDHPALYLKERRPRQLVERSHKLEK 752 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +IE+ N ++ + +Q+ G + E+ Sbjct: 753 LIELIEQIRTNDESCLIFTQYVRMGEMIQELLSDLFDERVLFLHGGVPKQTRDRMVDEFQ 812 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K P+ + G GLNL N ++ F WW+ +E R + G + V Sbjct: 813 AKKAPIFLLSLKAGGTGLNLTA-ANHVIHFDRWWNPA-----VENQATDRAYRIGQTKFV 866 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V+ LI TI+E + + L K + D++ Sbjct: 867 HVHKLITIGTIEEKIDEMLEQKQALADII 895 >gi|295396955|ref|ZP_06807077.1| Snf2 family helicase [Aerococcus viridans ATCC 11563] gi|294974808|gb|EFG50513.1| Snf2 family helicase [Aerococcus viridans ATCC 11563] Length = 1051 Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 73/205 (35%), Gaps = 21/205 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L D + + Q+ + + K + +++++ Sbjct: 832 KKIQDQLNNDSSNAGQTHMELLAGITRLRQICCHPRLVKNDYTGQ---SGKFEYFKIMLK 888 Query: 65 K--ANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDK-DPCTIQEWNEGKIPLL 112 + + ++V F S L + G+T K + E+N G + Sbjct: 889 RAIQSGRKVLVFSQFTSMLDVMSEYLAEEGIDYYMMTGQTNKKIRQEQVDEFNTGDKSVF 948 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL G + + + LWW+ +E + R + G K V V I Sbjct: 949 LISLRAGGVGINLT-GADTIFLYDLWWNPA-----VEEQAIGRAHRIGQKNDVEVVRFIT 1002 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI++ + + K + + L + Sbjct: 1003 EGTIEQRIAELQEEKRYLFEQLFDD 1027 >gi|257058201|ref|YP_003136089.1| SNF2-related protein [Cyanothece sp. PCC 8802] gi|256588367|gb|ACU99253.1| SNF2-related protein [Cyanothece sp. PCC 8802] Length = 1047 Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 68/216 (31%), Gaps = 24/216 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDE---KI 56 + Y K +L+ + S VK Q+ N + +EK H Sbjct: 813 ELYQKLVDSSLEELEDKTGIQRQGLILSLLVKLKQICNHPAQFLKEKQLNFPHRSGKLMR 872 Query: 57 KALEVIIEKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ F+ ++ G ++ I + Sbjct: 873 LEEMLEELIEEGDRALIFTQFSEWGKLLQPYLMAKFSQEVLFLHGGTRREQRQVMIDRFQ 932 Query: 106 E--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 L + G GLNL N + WW+ +E R + G KR Sbjct: 933 NAPDGPQLFILSLKAGGTGLNLTR-ANHVFHIDRWWNPA-----VENQATDRAFRIGQKR 986 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ + T+++ + + L TK + + ++A + Sbjct: 987 NVQVHKFVCTGTLEDKINEMLETKKQLAEQTVDAGE 1022 >gi|15835457|ref|NP_297216.1| SNF2 family helicase [Chlamydia muridarum Nigg] gi|8163332|gb|AAF73609.1| helicase, Snf2 family [Chlamydia muridarum Nigg] Length = 1202 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 90/223 (40%), Gaps = 25/223 (11%) Query: 2 KQY-HKFQREL--YCDLQGEN----IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHD 53 + Y ++E L+ E+ + + + + Q+ + +Y+ + + +K Sbjct: 957 QLYASTLKKEKCQIQQLEKEDDPAAVNYLHVFALLNQLKQICDHPAIYFKDPESYKNYAS 1016 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQ 102 K A ++ + + ++V + + + Q A QG++ ++ + Sbjct: 1017 GKWAAFVKLLNDSLASGYKVVVFSQYIQMIRIISLYLEEQNIQYALVQGKSQNRKEEIDR 1076 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL GN+++ + WW+ + E + R + G K Sbjct: 1077 FSNDPNCRVFIGSLLAAGTGINLTA-GNVVIMYDRWWNPAK-----ENQALDRVHRIGQK 1130 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ ++T++E + + K + + + +HV Sbjct: 1131 NTVFIYKLVTEDTLEEHIHYLIEKKMRLLNQVTTTQDSNILHV 1173 >gi|67924074|ref|ZP_00517522.1| SNF2-related:Helicase, C-terminal [Crocosphaera watsonii WH 8501] gi|67854073|gb|EAM49384.1| SNF2-related:Helicase, C-terminal [Crocosphaera watsonii WH 8501] Length = 1045 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 69/215 (32%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y +++ L+ S ++ Q+ N + + + K++ L Sbjct: 814 LYEAVVKDVLEKLEDTEGIQRKGLILSTLLRLKQICNHPRQFLQDNSDFIPNRSHKLERL 873 Query: 60 EVIIEKA--NAAPIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTIQEWNE 106 ++E+ ++ F L G K I ++ + Sbjct: 874 GEMLEEVIAEGDSFLIFTQFTEIGEALKTYLKQTLYYNTYYIHGGTNRQKRQQMITQFQD 933 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + G G+ L N + F WW+ +E R + G K+ Sbjct: 934 QDTPPSAFILSLKAGGVGITLTK-ANHVFHFDRWWNPA-----VEEQATDRAFRIGQKKN 987 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VFV+ + TI+E + + K + ++ + + Sbjct: 988 VFVHKFVTLGTIEERIDVMIEDKKKMASAIVGSDE 1022 >gi|218245175|ref|YP_002370546.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 8801] gi|218165653|gb|ACK64390.1| Non-specific serine/threonine protein kinase [Cyanothece sp. PCC 8801] Length = 1047 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 68/216 (31%), Gaps = 24/216 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDE---KI 56 + Y K +L+ + S VK Q+ N + +EK H Sbjct: 813 ELYQKLVDSSLEELEDKTGIQRQGLILSLLVKLKQICNHPAQFLKEKQLNFPHRSGKLMR 872 Query: 57 KALEVIIEKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ F+ ++ G ++ I + Sbjct: 873 LEEMLEELIEEGDRALIFTQFSEWGKLLQPYLMAKFSQEVLFLHGGTRREQRQVMIDRFQ 932 Query: 106 E--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 L + G GLNL N + WW+ +E R + G KR Sbjct: 933 NAPDGPQLFILSLKAGGTGLNLTR-ANHVFHIDRWWNPA-----VENQATDRAFRIGQKR 986 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ + T+++ + + L TK + + ++A + Sbjct: 987 NVQVHKFVCTGTLEDKINEMLETKKQLAEQTVDAGE 1022 >gi|209521910|ref|ZP_03270580.1| Non-specific serine/threonine protein kinase [Burkholderia sp. H160] gi|209497652|gb|EDZ97837.1| Non-specific serine/threonine protein kinase [Burkholderia sp. H160] Length = 1162 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 75/219 (34%), Gaps = 32/219 (14%) Query: 3 QYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDE----------EK 46 Y Q+++ + + + + +K Q+ Sbjct: 921 LYETVRTAMQQKVRAAVSAQGLARSHIIVLDALLKLRQVCCDPRLVRTASGITDGAAASG 980 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDK 96 + + K+ L ++ + +++ F LA + Sbjct: 981 GERAMRSAKLDLLLSMLPELIEEGRRVLLFSQFTGMLALIAKALDEAAIPYAMLTGDTTD 1040 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + +G++PL + G GLNL + ++ + WW+ E R Sbjct: 1041 RVTPVERFQQGEVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRA 1094 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + VFVY LIA +I+E +++ K+ + D +L Sbjct: 1095 HRLGQDKPVFVYKLIAAGSIEEKIVELQEHKAGLADSIL 1133 >gi|255038325|ref|YP_003088946.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] gi|254951081|gb|ACT95781.1| Non-specific serine/threonine protein kinase [Dyadobacter fermentans DSM 18053] Length = 982 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 82/213 (38%), Gaps = 20/213 (9%) Query: 2 KQYHKFQ---RELYCD-LQGENIEAFN--SASKTVKCLQLANGAVYY-DEEKHWKEVHDE 54 K Y + + R L + E + + QLAN V E H ++ Sbjct: 761 KAYEEAKAYYRNLILQSIDSEGMSKSQLVVLQGLTRLRQLANHPVMVDPEYAHDSGKFED 820 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQ-------KAFPQGRTLDKDPCTIQEWNEG 107 + L+ ++ + + I Y + DL R A+ G T D+ N+ Sbjct: 821 VLYKLQTVMSEDHKILIFSQYIKHLDLFRHYLDEKEINYAYLDGATRDRQEQVESFQNDE 880 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I + + G GLNL + + WW+ IE V R + G R VF Sbjct: 881 NIKIFLISLKAGGLGLNLTA-ADYVFILDPWWNPA-----IEAQAVDRAHRIGQDRTVFT 934 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Y I +N+++E +L R+K + D L+++ + Sbjct: 935 YKFITKNSVEEKILALQRSKKQLADDLISSEEG 967 >gi|223940436|ref|ZP_03632288.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] gi|223890881|gb|EEF57390.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] Length = 1099 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 74/214 (34%), Gaps = 30/214 (14%) Query: 2 KQY-HKFQR------ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y + +R + + +G + + + + Q+ + Sbjct: 879 KLYLAELRRSREQVFQTVAE-KGLSQSKIHVLAALTRLRQICCHPQLVGNDAQ-----SG 932 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K + L +++ + ++V F L L+ Q G+T + Sbjct: 933 KTETLFELLDPLLTDGQKVLVFSQFVQVLKILEAECQQRQIRTHLLTGQTKQRQEVVAAF 992 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 ++ + + G GLNL + +V + WW+ +E + R + G Sbjct: 993 QSDPNAAVFLLSLRAAGTGLNLTN-ASYVVLYDPWWNPA-----VEAQAIDRSHRIGQVN 1046 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V Y LIA T++E + + ++K+ +L Sbjct: 1047 TVNAYRLIAPGTVEEKIWELQQSKAQTIADVLGE 1080 >gi|310827837|ref|YP_003960194.1| HepA/SNF2 family protein [Eubacterium limosum KIST612] gi|308739571|gb|ADO37231.1| HepA/SNF2 family protein [Eubacterium limosum KIST612] Length = 1029 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 78/202 (38%), Gaps = 23/202 (11%) Query: 8 QRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +L +L G + E + + Q+ E+ K++ I++ Sbjct: 817 REDLAYELDGGDFERRKLIILAMLTRLRQICCDPSLVYEDYTDV---SAKLELCLEILDT 873 Query: 66 A--NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + + +++ F S L ++ + + +NE P+ Sbjct: 874 SLASGHKVLLFSQFTSMLEIIEKELIKREIDFYKITGRTKAQERLRQVNAFNEDDTPVFL 933 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G ++++ + WW+L R + G +V VY LIA+ Sbjct: 934 ISLKAGGTGLNLT-GADVVIHYDPWWNLSAQ-----NQATDRAHRIGQTNSVQVYNLIAK 987 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 ++I+E + + + K+ + D ++ Sbjct: 988 DSIEEKIQKMQQAKAELADSII 1009 >gi|330973232|gb|EGH73298.1| SNF2-related:helicase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 880 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDE--EKHWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ ++ + K+ K+ +L Sbjct: 652 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDLPVNSKQGTSGKLNSLME 711 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 712 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 771 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 772 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 825 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 826 ARGTVEEKIQRLQREKSALASGVLDG 851 >gi|228990815|ref|ZP_04150780.1| Helicase, SWF/SNF [Bacillus pseudomycoides DSM 12442] gi|228769341|gb|EEM17939.1| Helicase, SWF/SNF [Bacillus pseudomycoides DSM 12442] Length = 1071 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 71/213 (33%), Gaps = 27/213 (12%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + E L + + + + Q+ + ++ K Sbjct: 848 KLYAAYLAKLREETLKHLNKDTLRKNKIRILAGLTRLRQICCHPGLFVDDYR---GSSAK 904 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 + L I+E+ I++ F L+ + Sbjct: 905 FEQLLEIVEECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGNTPACERIELCNR 964 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ Q R + G K Sbjct: 965 FNEGEGDLFLISLRAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKN 1018 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+A TI+E + + +K + ++ Sbjct: 1019 TVQVIKLVAHGTIEEKMNELQESKKNLIAEVIE 1051 >gi|261337693|ref|ZP_05965577.1| SNF2 family protein [Bifidobacterium gallicum DSM 20093] gi|270277134|gb|EFA22988.1| SNF2 family protein [Bifidobacterium gallicum DSM 20093] Length = 1221 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 77/210 (36%), Gaps = 24/210 (11%) Query: 2 KQYHKFQRELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y +R+L LQ + F S + QL E K+ A Sbjct: 1001 KLYAASERKLRMMLQSSQDMNEDRFQVLSALTQLRQLCCDPRLVFENVSHAG---AKMDA 1057 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNE 106 + ++ + + +++ F S L + A + + +N Sbjct: 1058 IAELVTAARESGQKVLIFSQFVSFLDLIADMLDELGVAHMAITGSTPKQRRLELVDTFNM 1117 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P++ + G GLNL G ++++ WW+ + + R + G + V Sbjct: 1118 DDTPVMLISLKAGGTGLNLT-GASVVIHADPWWN-----EAAQNQATDRAHRIGQRHTVN 1171 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY ++A +T++E +L KS + LL+ Sbjct: 1172 VYKIVASDTVEERILGLQERKSELARTLLD 1201 >gi|297622033|ref|YP_003710170.1| putative SWI/SNF helicase family protein [Waddlia chondrophila WSU 86-1044] gi|297377334|gb|ADI39164.1| putative SWI/SNF helicase family protein [Waddlia chondrophila WSU 86-1044] Length = 868 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 23/210 (10%) Query: 3 QYHKFQ---RELYCD---LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +F ++ L G ++ Q+ + ++ + I Sbjct: 647 MYDQFAASAQQSLIQKIKLDGAGKHRMEIFETLLRLRQICCHPYLVNGQEGTSGKLEALI 706 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEG 107 +E I E+ ++ F S L+ + + G+T ++ + Sbjct: 707 ADMETIKEE--GKKALIFSQFTSMLSIIKKSCSKEGWKFCYLDGQTKERKEQVDHFQTDP 764 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +IP + G GLNL + ++ F WW+ +ER + R + G K V Sbjct: 765 EIPFFLISLKAGGVGLNLTA-ADYVLLFDPWWNPA-----VERQAIDRAHRIGRKDTVIA 818 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + ++I+E +L K + D LL+ Sbjct: 819 KRYLCLDSIEEKMLHLNTAKQHLADQLLDE 848 >gi|108760346|ref|YP_630479.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108464226|gb|ABF89411.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622] Length = 1006 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 67/206 (32%), Gaps = 21/206 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + E+ L+ + ++ Q A + K++AL Sbjct: 794 IYAATREEVVSQLEAGG-SVLKALEALLRLRQAACHPALVP---GQQAKTSSKVQALVEA 849 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGK-IPL 111 + + +V + S L ++ + + + K P+ Sbjct: 850 LGTAVEDGHKALVFSQWTSMLDLIEPALQEAGIGFIRLDGSTANRGAVAASFQDPKGPPV 909 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLNL + + WW+ +E R + G +R V VY L+ Sbjct: 910 MLISLKAGATGLNLTA-ADHVFLVDPWWNPS-----VEAQAADRAHRIGQQRPVMVYRLV 963 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 +Q T++E +L K + + L Sbjct: 964 SQGTVEEKILTLQAKKRELFEAALGG 989 >gi|168335382|ref|ZP_02693475.1| Non-specific serine/threonine protein kinase [Epulopiscium sp. 'N.t. morphotype B'] Length = 1031 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 82/207 (39%), Gaps = 23/207 (11%) Query: 8 QRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 ++EL ++ + ++ Q+ + E+ K+++ II+ Sbjct: 819 KKELMAEIAEDSREKNTIKMLAALMRLRQICAHPSMFLEDY---FGGSAKLESALEIIQD 875 Query: 66 A--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIPLLF 113 +++ F S LA + + + ++E+NEG + + Sbjct: 876 CVEAGHKVLLFSQFTSMLAMISQKLHEKMIRHNTLXGDVRPKDRMKMVEEFNEGDMQVFL 935 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL +I++ + WW+L R + G K V V+ LIA+ Sbjct: 936 ISLKAGGVGLNLTA-ADIVIHYDPWWNLSAQ-----NQATDRAYRMGQKNTVQVFKLIAK 989 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKK 200 NTI+E + Q +K+ + + +L+ K Sbjct: 990 NTIEEKIKQLQDSKALLSESILSNENK 1016 >gi|229004592|ref|ZP_04162330.1| Helicase, SWF/SNF [Bacillus mycoides Rock1-4] gi|228756633|gb|EEM05940.1| Helicase, SWF/SNF [Bacillus mycoides Rock1-4] Length = 887 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 23/205 (11%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ + ++ K + L I+ Sbjct: 672 KLREETLKHLNKDTLRKNKIRILAGLTRLRQICCHPGLFVDDYR---GSSAKFEQLLEIV 728 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 729 EECRSTGKRILIFSQFTKMLSIIGRELNRQAVPYFYLDGNTPAFERVELCNRFNEGEGDL 788 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 789 FLISLRAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 842 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 A TI+E + + +K + ++ Sbjct: 843 AHGTIEEKMNELQESKKNLIAEVIE 867 >gi|71733698|ref|YP_274080.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554251|gb|AAZ33462.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. phaseolicola 1448A] Length = 914 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 686 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 745 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 746 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 805 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 806 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 859 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 860 ARGTVEEKIQRLQREKSALAAGVLDG 885 >gi|320324786|gb|EFW80858.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] gi|330986243|gb|EGH84346.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331013173|gb|EGH93229.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 914 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 686 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 745 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 746 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 805 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 806 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 859 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 860 ARGTVEEKIQRLQREKSALAAGVLDG 885 >gi|154687749|ref|YP_001422910.1| YwqA [Bacillus amyloliquefaciens FZB42] gi|154353600|gb|ABS75679.1| YwqA [Bacillus amyloliquefaciens FZB42] Length = 924 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 81/213 (38%), Gaps = 25/213 (11%) Query: 3 QYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--DEKIK 57 Y + ++ L G +A S + Q+ + Y +E+ + ++ K++ Sbjct: 694 LYEQLVKDTFEHMASLTGMQRKAL-ILSMLGRLKQICDHPALYLKEEQTELLNGRSVKLE 752 Query: 58 ALEVII--EKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEW 104 L ++ + ++ + ++ + + + ++ + Sbjct: 753 KLLDLMAVIRGQGESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDSLVERF 812 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + P L + G GLNL N ++ + WW+ +E R + G +R Sbjct: 813 QKKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQERF 866 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI TI+E + L TK T+ D ++ + Sbjct: 867 VHVHKLITTGTIEEKIDAMLETKQTLNDQIIQS 899 >gi|159039139|ref|YP_001538392.1| non-specific serine/threonine protein kinase [Salinispora arenicola CNS-205] gi|157917974|gb|ABV99401.1| Non-specific serine/threonine protein kinase [Salinispora arenicola CNS-205] Length = 1074 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 60/214 (28%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ + + Q+ N + K+ LE Sbjct: 844 LYRAVVDDMLAQIESSDGIERRGLVLAAMTRLKQVCNHPAQLLRDGSALAGRSGKLARLE 903 Query: 61 VIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNE- 106 +++ ++ + R G + + Sbjct: 904 ETLDEVLAAGEKALLFTQYAEFGGMLRGHLSARFGRETLFLHGGVGKADRDAMVTRFQAT 963 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 PL + G GL L N +V WW+ +E R + G +R V Sbjct: 964 DGPPLFVLSLKAGGTGLTLTA-ANHVVHVDRWWNPA-----VEDQATDRAFRIGQQRRVQ 1017 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V + T++E V + K + ++ ++ Sbjct: 1018 VRKFVCAGTVEEKVAALIADKRRLASTVVGTGEQ 1051 >gi|158320324|ref|YP_001512831.1| helicase domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140523|gb|ABW18835.1| helicase domain protein [Alkaliphilus oremlandii OhILAs] Length = 419 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 18/206 (8%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + ++ Y L+ + A N +K ++ QL G + ++ K++ K+ AL+ Sbjct: 211 KLYKRILKDSYVQLEKGEVTAQNLLTKLLRLSQLTGGFIG-ADDGTIKQISKAKLDALKE 269 Query: 62 II--EKANAAPIIVAYHF---------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 II K ++V F D + ++ G D+ + E + Sbjct: 270 IIEDMKDAGKKLVVFARFLPEINAIKNMLDEMEISYSYITGEVKDRGEEVRKFQEEDGVR 329 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + A + G G+ L + +VF+SL ++ + R + G K +L Sbjct: 330 VFIAQIQTAGLGITLHA-ADTVVFYSLDFNYANYS-----QARARIHRIGQKNTCTYIHL 383 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 IA T+DE +L+ L K I +++ Sbjct: 384 IAPGTVDEKILKALEKKENIAKQIVD 409 >gi|255659992|ref|ZP_05405401.1| helicase, Snf2 family [Mitsuokella multacida DSM 20544] gi|260847745|gb|EEX67752.1| helicase, Snf2 family [Mitsuokella multacida DSM 20544] Length = 1078 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 82/208 (39%), Gaps = 23/208 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK F RE+ GE + + Q+A + E H K+ LE Sbjct: 862 MKSQRDFMREVSLASPGER--RIKILAILTRLRQIACDPALFLESYH---GGSGKLDMLE 916 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGK 108 +IE+A +++ F + LA + + ++E+N G Sbjct: 917 ELIEEAIEGGHRLLIFSQFTTMLAHIAERLRRKGLAYFSLDGATPALTRMKLVREFNRGA 976 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +P+ + G GLNL G +++V F WW+ +E R + G + V V+ Sbjct: 977 VPIFLISLKAGGTGLNLT-GADMVVHFDPWWNPA-----VEDQATDRAYRLGQRNNVQVF 1030 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI + T++E + + K ++ D ++ Sbjct: 1031 KLIMKGTVEEKIYELQEKKKSLIDQMIQ 1058 >gi|239828513|ref|YP_002951137.1| non-specific serine/threonine protein kinase [Geobacillus sp. WCH70] gi|239808806|gb|ACS25871.1| Non-specific serine/threonine protein kinase [Geobacillus sp. WCH70] Length = 925 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + + + + A Q+ + Y +E+ +++ K++ Sbjct: 694 LYEQLVNDTLERAKNASPFARRGLILQMLNGVKQICDHPALYLKERRPRQLVERSHKLEK 753 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +IE+ N ++ + +Q+ G ++E+ Sbjct: 754 LVELIEQIRANDESCLIFTQYVRMGEMIQQLLSDLFDERVLFLHGGVPKQTRDRMVEEFQ 813 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K P+ + G GLNL N ++ F WW+ +E R + G + V Sbjct: 814 ARKAPIFLLSLKAGGTGLNLTA-ANHVIHFDRWWNPA-----VENQATDRAYRIGQTKFV 867 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI TI+E + + L K + D++ Sbjct: 868 HVHKLITVGTIEEKIDEMLEQKQALADIITEG 899 >gi|171059597|ref|YP_001791946.1| non-specific serine/threonine protein kinase [Leptothrix cholodnii SP-6] gi|170777042|gb|ACB35181.1| Non-specific serine/threonine protein kinase [Leptothrix cholodnii SP-6] Length = 1449 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 70/214 (32%), Gaps = 27/214 (12%) Query: 4 YHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y +R+ D + G N ++ ++ + A + K+ Sbjct: 1225 YEALRRQALRDAERAMSADGAGQAHLNILAQLMRLRRAACDPRLVTPDLVQ---PGAKVM 1281 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 A + + AN +V F LA + + + + Sbjct: 1282 AFGELAAELVANGHKALVFSQFVDFLALLREPLDAAGLRYQYLDGSTPSAERTRRVAAFQ 1341 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + G GLNL + +V WW+ E R + G +R V Sbjct: 1342 AGEGDFFLISLKAGGFGLNLT-VADYVVIADPWWNPAA-----EDQASGRAHRIGQQRPV 1395 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L+ + T++E ++ K + D +L A + Sbjct: 1396 TVYRLVNKGTLEEKIVALHADKRELADSVLEADR 1429 >gi|66045135|ref|YP_234976.1| SNF2-related:helicase, C-terminal:SWIM Zn-finger [Pseudomonas syringae pv. syringae B728a] gi|63255842|gb|AAY36938.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Pseudomonas syringae pv. syringae B728a] Length = 914 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 686 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 745 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 746 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 805 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 806 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 859 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 860 ARGTVEEKIQRLQREKSALASGVLDG 885 >gi|91778444|ref|YP_553652.1| putative helicase [Burkholderia xenovorans LB400] gi|91691104|gb|ABE34302.1| Putative helicase [Burkholderia xenovorans LB400] Length = 1150 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 79/231 (34%), Gaps = 39/231 (16%) Query: 3 QYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q ++ + + + + +K Q+ K + H Sbjct: 902 LYETVRTAMQEKVRAAVSAQGLARSHIIVLDALLKLRQVCCDPRLVRMLKAAGDAHETHD 961 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 K+ L ++ + +++ F L+ + +A + Sbjct: 962 RTDRVEKGARAMRSAKLDLLLSMLPELIEEGRRVLLFSQFTGMLSLIAEALEEAAIPYVI 1021 Query: 96 ------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ + +G++PL + G GLNL + ++ + WW+ E Sbjct: 1022 LTGDTADRVTPVERFQQGEVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----E 1075 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1076 NQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILSEDAA 1126 >gi|328555338|gb|AEB25830.1| ATP-binding SNF2 helicase or protein kinase [Bacillus amyloliquefaciens TA208] gi|328913706|gb|AEB65302.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus amyloliquefaciens LL3] Length = 924 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 81/213 (38%), Gaps = 25/213 (11%) Query: 3 QYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--DEKIK 57 Y + ++ L G +A S + Q+ + Y +E+ + ++ K++ Sbjct: 694 LYEQLVKDTFEHMASLTGMQRKAL-ILSMLGRLKQICDHPALYLKEEQTELLNGRSVKLE 752 Query: 58 ALEVII--EKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEW 104 L ++ + ++ + ++ + + + ++ + Sbjct: 753 KLLDLMAAIRGQGESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDSLVERF 812 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + P L + G GLNL N ++ + WW+ +E R + G +R Sbjct: 813 QKKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQERF 866 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI TI+E + L TK T+ D ++ + Sbjct: 867 VHVHKLITTGTIEEKIDAMLETKQTLNDQIIQS 899 >gi|320329151|gb|EFW85148.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 914 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ ++ + K+ K+ +L Sbjct: 686 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQGMPVNSKQGTSGKLNSLME 745 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 746 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 805 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 806 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 859 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 860 ARGTVEEKIQRLQREKSALAAGVLDG 885 >gi|308175364|ref|YP_003922069.1| ATP-binding SNF2 helicase or protein kinase [Bacillus amyloliquefaciens DSM 7] gi|307608228|emb|CBI44599.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus amyloliquefaciens DSM 7] Length = 924 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 81/213 (38%), Gaps = 25/213 (11%) Query: 3 QYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--DEKIK 57 Y + ++ L G +A S + Q+ + Y +E+ + ++ K++ Sbjct: 694 LYEQLVKDTFEHMASLTGMQRKAL-ILSMLGRLKQICDHPALYLKEEQTELLNGRSVKLE 752 Query: 58 ALEVII--EKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEW 104 L ++ + ++ + ++ + + + ++ + Sbjct: 753 KLLDLMAAIRGQGESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDSLVERF 812 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + P L + G GLNL N ++ + WW+ +E R + G +R Sbjct: 813 QKKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQERF 866 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI TI+E + L TK T+ D ++ + Sbjct: 867 VHVHKLITTGTIEEKIDAMLETKQTLNDQIIQS 899 >gi|47565536|ref|ZP_00236577.1| Snf2 family protein [Bacillus cereus G9241] gi|47557526|gb|EAL15853.1| Snf2 family protein [Bacillus cereus G9241] Length = 1064 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + E L + + + + Q+ N + ++ K + L I+ Sbjct: 849 KLREETLKHLDKDTLRKNKIRILAGLTRLRQICNHPALFVDDYK---GSSAKFEQLLDIL 905 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ I++ F L+ + +NEG+ L Sbjct: 906 EECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSQERVELCNRFNEGEGDL 965 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ Q R + G K V V L+ Sbjct: 966 FLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKNTVQVIKLV 1019 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A TI+ + + +K + ++ +++ Sbjct: 1020 AHGTIEGKMHELQESKKNLIAEVIEPGEEK 1049 >gi|237797684|ref|ZP_04586145.1| SNF2-related:helicase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020534|gb|EGI00591.1| SNF2-related:helicase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 918 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDE--EKHWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ ++ + K+ K+ +L Sbjct: 690 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPANSKQGTSGKLNSLME 749 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 750 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 809 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 810 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 863 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 864 ARGTVEEKIQRLQREKSALAAGVLDG 889 >gi|325283092|ref|YP_004255633.1| SNF2-related protein [Deinococcus proteolyticus MRP] gi|324314901|gb|ADY26016.1| SNF2-related protein [Deinococcus proteolyticus MRP] Length = 1322 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELY------CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + L + +G + ++ Q A ++ K Sbjct: 961 LYETVRANLEGRVRRELEARGLARSSVTILDALLRLRQAATDPRLVRLSAAASVQNNAKR 1020 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNE 106 + L + + ++V F S L L+ + I+++ Sbjct: 1021 EWLRSQLPELVQEGHRVLVFSQFASLLGLLEADLKELGISYSKLTGQTRRRAEAIEQFQS 1080 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + + G GLNL + ++ WW+ E R + G + VF Sbjct: 1081 GHADVFLISLKAGGVGLNLTA-ADTVIHLDPWWNPAA-----EAQATDRAYRIGQDQPVF 1134 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA +++E +L K+ + +L+ Sbjct: 1135 VYKLIAAGSVEERILDLQARKAALASGVLDG 1165 >gi|115372534|ref|ZP_01459842.1| helicase [Stigmatella aurantiaca DW4/3-1] gi|310819012|ref|YP_003951370.1| swi/snf family helicase [Stigmatella aurantiaca DW4/3-1] gi|115370496|gb|EAU69423.1| helicase [Stigmatella aurantiaca DW4/3-1] gi|309392084|gb|ADO69543.1| SWI/SNF family helicase [Stigmatella aurantiaca DW4/3-1] Length = 1000 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 66/206 (32%), Gaps = 21/206 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + E+ L+ + ++ Q A + K+ AL Sbjct: 788 VYAATREEVVSQLEEGG-SVLKALEALLRLRQAACHPALVP---GQQAKTSSKVLALIEA 843 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNEGK-IPL 111 + + +V + S L ++ A + + + P+ Sbjct: 844 LGTAVEDGHKALVFSQWTSMLDLIEPALREAGIGFVRLDGGTADRGGVAASFQAPEGPPV 903 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLNL + + WW+ +E R + G +R V VY L+ Sbjct: 904 MLISLKAGATGLNLTA-ADHVFLVDPWWNPS-----VEAQAADRAHRIGQQRPVMVYRLV 957 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 +Q T++E +L K + + L Sbjct: 958 SQGTVEEKILTLQEKKRALFEAALGG 983 >gi|291234127|ref|XP_002737002.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like [Saccoglossus kowalevskii] Length = 1241 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 75/211 (35%), Gaps = 23/211 (10%) Query: 3 QYHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y RE+ + + + Q+ N Y + K H K+K L Sbjct: 1016 LYESLVREMMQKIIECKEKGQRNKYIFKILTHLKQICNHPANYLDSKPSIVEHSGKMKML 1075 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWN- 105 ++E +++ + ++ + K + K I + Sbjct: 1076 VELLEPILQQGEKVLIFSQYVRMISLMAKMLEHHFHIKPLTLEGSMSQIKRDKVIHAFKT 1135 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E + + G GLNL N ++ + LW++ +E R + G ++V Sbjct: 1136 EPHQQVFIISLKAGGTGLNLTE-ANHVIHYDLWYNPA-----VENQATDRAYRIGQSKSV 1189 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY +I + T +E + + + K + DL +N Sbjct: 1190 FVYRMITEKTFEERIDEMIVKKKDLSDLSVN 1220 >gi|330961339|gb|EGH61599.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 885 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ + + + K+ K+ +L Sbjct: 657 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLME 716 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 717 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 776 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 777 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 830 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 831 ARGTVEEKIQRLQREKSALAAGVLDG 856 >gi|325261436|ref|ZP_08128174.1| helicase, SNF2/RAD54 family [Clostridium sp. D5] gi|324032890|gb|EGB94167.1| helicase, SNF2/RAD54 family [Clostridium sp. D5] Length = 871 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 78/217 (35%), Gaps = 26/217 (11%) Query: 7 FQRELYCDLQGENIEAFN------SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 R++ DL+ + EA + +K Q+ N Y ++ + K L+ Sbjct: 646 LYRKVILDLENKLAEAEGIERCGLVLTSIMKLKQICNHPDQYMGQQTFALEDSGKFAMLK 705 Query: 61 VII--EKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 I +++ F G + K ++ + E Sbjct: 706 EICETIYEKRERVLIFTQFKEITEYLGDFLKSIFKTEGYVLHGGTPVKKRSEIVEAFQGE 765 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 IP + + G GLNL N ++ F WW+ +E R + G ++ V Sbjct: 766 KYIPYIVLSVKAGGTGLNLTK-ANHVIHFDRWWNPA-----VENQATDRAFRIGQEKNVM 819 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V+ L+ TI+E + + +K + + ++ + ++ I Sbjct: 820 VHKLVCTGTIEEKIDAMINSKKELAENVIGSGGEKWI 856 >gi|297621810|ref|YP_003709947.1| SWI/SNF helicase 2 family protein [Waddlia chondrophila WSU 86-1044] gi|297377111|gb|ADI38941.1| SWI/SNF helicase 2 family protein [Waddlia chondrophila WSU 86-1044] Length = 1156 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 80/211 (37%), Gaps = 21/211 (9%) Query: 4 YHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K RE L +G + + + + Q+ + +EK ++ K L Sbjct: 937 YAKSAREELSQLVKKEGFDKVQIHVLATLTRLKQICCHPAIFAKEKA-EDGDSSKYDMLV 995 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKI 109 +++ ++ + L ++ + G T ++ + + I Sbjct: 996 ELLQTLIEGGHKTVIFSQYTKMLQIMRKDLQTLGIRFEYLDGATKNRMNIVKKFNEDHNI 1055 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G GLNL G + ++ + +WW+ +E R + G R+V Y Sbjct: 1056 PVFLVSLKAGGSGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQTRSVSSYK 1109 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 L+ TI+E +L+ K + ++N ++ Sbjct: 1110 LVTMGTIEEKILELQERKKGLVKKVINTDEE 1140 >gi|293379105|ref|ZP_06625256.1| SNF2 family N-terminal domain protein [Enterococcus faecium PC4.1] gi|292642246|gb|EFF60405.1| SNF2 family N-terminal domain protein [Enterococcus faecium PC4.1] Length = 705 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 479 VYLAYLRQMREEISSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLE 535 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ ++ K N +++ F L LQ + +N Sbjct: 536 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 595 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ IE R + G K V Sbjct: 596 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVV 649 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +I++ TI+E + + K + ++ +++ + Sbjct: 650 EVWRMISEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 689 >gi|68536447|ref|YP_251152.1| putative DNA/RNA helicase [Corynebacterium jeikeium K411] gi|68264046|emb|CAI37534.1| putative DNA/RNA helicase [Corynebacterium jeikeium K411] Length = 1023 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 27/218 (12%) Query: 3 QYHKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y F + E+ L G A N VK Q+ N ++ + KI Sbjct: 786 LYETFIKDMEMRLQLPGGKRRA-NILGALVKIKQICNHPAHFAGDGSGILADGKHRSAKI 844 Query: 57 KALEVIIEK--ANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQE 103 + + I ++ +++ F S G + K +++ Sbjct: 845 ERIFEITDQALEQGKKVLMFTQFPTFGKMLAPELQSTFGVEVPVLHGGLSRAKRTQMVRD 904 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + P++ + G G+ L ++++ WW+ +E R + G Sbjct: 905 FQSADGPPIMILSVRAGGTGITLTE-ASVVIHIDRWWNPA-----VEDQATDRAYRIGQN 958 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++V VY L+ Q TIDE + + +K + ++ A + Sbjct: 959 KSVEVYKLVVQGTIDERIHDIIMSKRELAGDIVGAGEG 996 >gi|325662084|ref|ZP_08150703.1| hypothetical protein HMPREF0490_01441 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471747|gb|EGC74966.1| hypothetical protein HMPREF0490_01441 [Lachnospiraceae bacterium 4_1_37FAA] Length = 451 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 108/202 (53%), Gaps = 9/202 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY + + + + E I A N+A+ + K Q+ANGA+ Y + +HD K++ALE I Sbjct: 255 QYDEMREDYLLPYKEEAITAANAAALSGKLCQMANGAI-YSDSGEAVHIHDRKLEALEDI 313 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLFAHPASC 119 IE A PI++ Y F DL R+ + Q + I++WNEGK + HPAS Sbjct: 314 IEAAQG-PILLCYWFKHDLERITEKLEQLKVFYSRIVTEENIRKWNEGKYDVGLIHPASA 372 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GHGLNLQ+ N +V+F L W LE +QQ R+ Q+Q V V +++ TIDE Sbjct: 373 GHGLNLQHSSNHIVWFGLTWSLELYQQTNARLWRQGQKQD----TVVVQHIVTAGTIDED 428 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 +L L K Q L++A+K Sbjct: 429 ILDALTHKDASQTRLIDAVKAR 450 >gi|257067534|ref|YP_003153789.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] gi|256558352|gb|ACU84199.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] Length = 1026 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 74/218 (33%), Gaps = 30/218 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y EL + G + + + + Q+ N +Y + E K+ Sbjct: 789 LYEAIVEELMTQIDGADEKNRRTLVVSAITRLKQVCNHPAHYLGDGSALVREGEHRSGKL 848 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF--------------PQGRTLDKDPCT 100 + ++ +++ ++ F + L + G + Sbjct: 849 ELVDDLLQTAFEKGHKALLFTQFTTFGHLLVPYWRERFAEFGIDVPFLHGGVSKRDRDQM 908 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+ + + L+ + G GL L N +V WW+ +E R + Sbjct: 909 VAEFQQHRDRPGLMLLSLRAGGTGLTLTA-ANHVVHLDRWWNPA-----VENQATDRAFR 962 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G +R V V L++ T++E + L+ K + +L + Sbjct: 963 IGQRRDVTVNTLVSAGTVEEKIDTVLQDKQALAELTVG 1000 >gi|289648568|ref|ZP_06479911.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. aesculi str. 2250] Length = 914 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 686 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 745 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 746 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 805 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 806 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 859 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 860 ARGTVEEKIQRLQREKSALAAGVLDG 885 >gi|289624075|ref|ZP_06457029.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330869863|gb|EGH04572.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 914 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 686 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 745 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 746 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 805 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 806 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 859 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 860 ARGTVEEKIQRLQREKSALAAGVLDG 885 >gi|289706474|ref|ZP_06502828.1| SNF2 family N-terminal domain protein [Micrococcus luteus SK58] gi|289556793|gb|EFD50130.1| SNF2 family N-terminal domain protein [Micrococcus luteus SK58] Length = 1143 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 75/210 (35%), Gaps = 22/210 (10%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R++ L + F LA D+ + V K++ Sbjct: 916 KLYDRVLQRERRKVLGLLGDMDGNRFTIFKSLTLLRMLALAPQIVDD--QYASVPSSKLE 973 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEG 107 + + +IV F S L + + I+ + EG Sbjct: 974 RFLDDLTEVIGEGHRVIVFSQFTSFLRVIAEELDHLEIEHAYLDGSTRGRAEVIRGFREG 1033 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GL L + + WW+ E V R + G +R V V Sbjct: 1034 EAPVFLISLKAGGFGLTLTE-ADYVFLMDPWWNPAA-----EAQAVDRAHRIGQERTVMV 1087 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+++ TI+E VL+ R K+ + L++ Sbjct: 1088 YRLVSEGTIEEKVLELQRRKAELFGALMDE 1117 >gi|301381674|ref|ZP_07230092.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato Max13] Length = 918 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ + + + K+ K+ +L Sbjct: 690 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLME 749 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 750 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 809 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 810 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 863 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 864 ARGTVEEKIQRLQREKSALAAGVLDG 889 >gi|229084801|ref|ZP_04217060.1| Helicase, SWF/SNF [Bacillus cereus Rock3-44] gi|228698515|gb|EEL51241.1| Helicase, SWF/SNF [Bacillus cereus Rock3-44] Length = 1071 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 70/213 (32%), Gaps = 27/213 (12%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + E L + + + + Q+ + ++ K Sbjct: 848 KLYAAYLAKLREETLKHLDKDTLRKNKIRILAGLTRLRQICCHPGLFVDDYK---GSSAK 904 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 + L I+E+ I++ F L+ + Sbjct: 905 FEQLLEIVEECRSTGKRILIFSQFTKMLSIIGRELNRQAIPYFYLDGNTPSAERVELCNR 964 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ Q R + G K Sbjct: 965 FNEGEGDLFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKN 1018 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V L+A TI+E + + K + ++ Sbjct: 1019 TVQVIKLVAHGTIEEKMNELQENKKHLIAEVIE 1051 >gi|229542511|ref|ZP_04431571.1| SNF2-related protein [Bacillus coagulans 36D1] gi|229326931|gb|EEN92606.1| SNF2-related protein [Bacillus coagulans 36D1] Length = 933 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 67/214 (31%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKA 58 Y + + + + + QL N + +E+ K++ Sbjct: 708 LYEETVQNAFKGIDQLSGLGRRALILQMLNRLKQLCNHPALFLKEEKPAHLLERSFKLEK 767 Query: 59 ----LEVIIEKANAAPIIVAY---------HFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 E I+ + I Y K I+++ Sbjct: 768 LATLTEAILNTGESCLIFTQYIGMGQMIRQMMKELFGLDVPFLNGSMPKAKRDQLIRDFQ 827 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 P+ + G GLNL N ++ + WW+ +E R + G +R V Sbjct: 828 NKAFPVFLLSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAHRIGQQRFV 881 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V+ LIA T++E + L K + D ++ + Sbjct: 882 HVHKLIATGTLEEKIDAMLEKKQALNDEIIQSDN 915 >gi|52082146|ref|YP_080937.1| putative helicase YwqA [Bacillus licheniformis ATCC 14580] gi|52787537|ref|YP_093366.1| YwqA [Bacillus licheniformis ATCC 14580] gi|319648023|ref|ZP_08002240.1| YwqA protein [Bacillus sp. BT1B_CT2] gi|52005357|gb|AAU25299.1| putative helicase YwqA [Bacillus licheniformis ATCC 14580] gi|52350039|gb|AAU42673.1| YwqA [Bacillus licheniformis ATCC 14580] gi|317389658|gb|EFV70468.1| YwqA protein [Bacillus sp. BT1B_CT2] Length = 921 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--DEKIKA 58 Y + ++ + + S K Q+ Y +E + ++ K++ Sbjct: 691 LYEQLVKDTFEHMSSLAGMQRKALILSMLGKLKQICGHPALYLKETGSELLNGRSVKLEK 750 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L + + + ++ + +++ + + ++++ Sbjct: 751 LLELTKTIRESDESCLIFTQYLGMGDMMKRLLEKSFGEPVKFLNGSLSKLERDKMVEQFQ 810 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + P+L + G GLNL N ++ + WW+ +E R + G KR V Sbjct: 811 NKEFPILILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKRFV 864 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI TI+E + Q L +K ++ D ++ + Sbjct: 865 HVHKLITTGTIEEKIDQMLESKQSLNDQIIQS 896 >gi|298486414|ref|ZP_07004475.1| helicase/SNF2 family domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159042|gb|EFI00102.1| helicase/SNF2 family domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 914 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 686 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 745 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 746 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 805 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 806 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 859 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 860 ARGTVEEKIQRLQREKSALAAGVLDG 885 >gi|322691254|ref|YP_004220824.1| phage protein [Bifidobacterium longum subsp. longum JCM 1217] gi|320456110|dbj|BAJ66732.1| hypothetical phage protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 460 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 108/206 (52%), Gaps = 11/206 (5%) Query: 4 YHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVY---YDEEKHWKEVHDEKIKAL 59 Y + +R++ DL + N+ T K QL G +Y D E + V D K+ AL Sbjct: 260 YDRLRRQMVADLDDGTTVTVANAGVLTAKLAQLTCGCLYPDADDPEGTIRHVDDVKLDAL 319 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II A+ P++V Y F +L R++ FP R + + ++EW G++PLL AHP + Sbjct: 320 ADIISAADG-PVLVFYQFTDELERMRARFPGMREVHE-QGVLEEWRNGRVPLLAAHPQAA 377 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GLN+Q GG+ +V+ SL W +++ R R + G KR V V+ L+ NT+D Sbjct: 378 KYGLNIQDGGHEIVWTSLPWSFDDY-----RQACDRLHRQGQKRTVRVHRLLESNTVDRR 432 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 L L + + + +++AL+ ET V Sbjct: 433 KLDVLTGRMMLHEAVMDALEGETAGV 458 >gi|94265883|ref|ZP_01289612.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93453578|gb|EAT03977.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 389 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 69/208 (33%), Gaps = 26/208 (12%) Query: 5 HKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 +R LQ EA ++ ++ + A + + K+ Sbjct: 167 ETIRRRALEVLQENEGEAAGRRHLKVLAELMRLRRAACHPRLVLGKGA---LMAGKLPLF 223 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEG 107 ++ +N +V F LA + + + + + G Sbjct: 224 AEVLHDIISNRHKALVFSQFVDHLAIVREYLDGQGIGYQYLDGSTPARERQRAVAAFQAG 283 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL + ++ WW+ +E R + G +R V + Sbjct: 284 EGEVFCISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----VEDQASDRAHRIGQERPVTI 337 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y L+ + +I+E +L K + + LL Sbjct: 338 YRLVTKGSIEEKILALHGHKRDLAENLL 365 >gi|326332924|ref|ZP_08199181.1| SNF2/helicase domain protein [Nocardioidaceae bacterium Broad-1] gi|325949282|gb|EGD41365.1| SNF2/helicase domain protein [Nocardioidaceae bacterium Broad-1] Length = 1055 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 71/210 (33%), Gaps = 22/210 (10%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y ++ + L N S + QL+ D E K+ Sbjct: 836 KIYDAHLAKERQRILHLLDDFNDNRVAILSALTRLRQLSLDPGLVDPEDDHVG--SAKLD 893 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTIQEWNEG 107 L IE+ A +V F S L R + I+ + +G Sbjct: 894 TLVDHIEELAAEGHKALVFSQFTSFLGRARTRLAEAGIDAAYLDGATRDRGAVIESFRDG 953 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GL L + + WW+ E V R + G + V V Sbjct: 954 DAPVFLISLKAGGVGLTLTE-ADYVFVLDPWWNPAA-----EAQAVDRAHRIGQTQHVMV 1007 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L++ +TI+E V++ K+ + +++ Sbjct: 1008 YRLVSTDTIEEKVMELKERKAELFAKVVDG 1037 >gi|302386693|ref|YP_003822515.1| SNF2-related protein [Clostridium saccharolyticum WM1] gi|302197321|gb|ADL04892.1| SNF2-related protein [Clostridium saccharolyticum WM1] Length = 1047 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 71/202 (35%), Gaps = 22/202 (10%) Query: 7 FQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 ++ L+ + + + Q+ + K++ +I Sbjct: 834 LLKQELERLEDRRGRDNIQILAALTRLRQICCDPHLCYNNYKGE---SAKLETCMDLIRN 890 Query: 66 --ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 I++ F S L + ++ + + + +IPL Sbjct: 891 GVEGGHKILLFSQFTSMLEIMEQRLKKEAVPYYMLTGATPKEERLHMVNSFKDDEIPLFL 950 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL ++++ F WW++ R + G ++ V V+ LI + Sbjct: 951 ISLKAGGTGLNLTA-ADVVIHFDPWWNVAAQ-----NQATDRAHRIGQEKQVSVFKLITK 1004 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 NTI+E +L+ +K + + ++ Sbjct: 1005 NTIEENILKLQESKKDLAEQII 1026 >gi|260577578|ref|ZP_05845517.1| DNA/RNA helicase [Corynebacterium jeikeium ATCC 43734] gi|258604302|gb|EEW17540.1| DNA/RNA helicase [Corynebacterium jeikeium ATCC 43734] Length = 1029 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 27/218 (12%) Query: 3 QYHKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y F + E+ L G A N VK Q+ N ++ + KI Sbjct: 792 LYETFIKDMEMRLQLPGGKRRA-NILGALVKIKQICNHPAHFAGDGSGILADGKHRSAKI 850 Query: 57 KALEVIIEK--ANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQE 103 + + I ++ +++ F S G + K +++ Sbjct: 851 ERIFEITDQALEQGKKVLMFTQFPTFGKMLAPELQSTFGVEVPVLHGGLSRAKRTQMVRD 910 Query: 104 WNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + P++ + G G+ L ++++ WW+ +E R + G Sbjct: 911 FQSVDGPPIMILSVRAGGTGITLTE-ASVVIHIDRWWNPA-----VEDQATDRAYRIGQN 964 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++V VY L+ Q TIDE + + +K + ++ A + Sbjct: 965 KSVEVYKLVVQGTIDERIHDIIMSKRELAGDIVGAGEG 1002 >gi|251795483|ref|YP_003010214.1| SNF2-related protein [Paenibacillus sp. JDR-2] gi|247543109|gb|ACT00128.1| SNF2-related protein [Paenibacillus sp. JDR-2] Length = 965 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 27/224 (12%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKH----WKEVHDEKI 56 Y +L L G + + QL + +EE+ W E K+ Sbjct: 730 IYENIVADLLEKLDKLGPMQRRGLILASLTRLKQLCDHPAMLNEERELQQQWDESRSNKV 789 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 L ++E+ + ++ F L G K I + Sbjct: 790 ARLLEMVEEIASEGERCLIFTQFVDMGEQLKKLLEERLGLPVPYLHGGVPKAKRDDMIDK 849 Query: 104 WNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + P + G GLNL N + F WW+ +E R + G Sbjct: 850 FQNPEEPCCAFVLSLKAGGTGLNLTA-ANHVFHFDRWWNPA-----VENQATDRAFRIGQ 903 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V V+ I T++E + + + K + + ++ ++ + Sbjct: 904 TKQVQVHKFITLGTLEEKIDEMIDRKQQLNEQVVGQSEQWITEL 947 >gi|330878594|gb|EGH12743.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 918 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ + + + K+ K+ +L Sbjct: 690 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLME 749 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 750 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 809 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 810 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 863 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 864 ARGTVEEKIQRLQREKSALAAGVLDG 889 >gi|317491226|ref|ZP_07949662.1| SNF2 family domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920773|gb|EFV42096.1| SNF2 family domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 1085 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 22/211 (10%) Query: 3 QYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKH--WKEVHDE 54 Y Q ++ + + + + +K Q+ + EK KE Sbjct: 860 LYETVRTAMQEKVRTAIDSQGMARSHIIVLDALLKLRQVCCDPRLVNLEKAALVKESAKL 919 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNE 106 ++ + I++ F L + + + +Q + Sbjct: 920 ELLLELLPEMIEEGRRILLFSQFTGMLDLISQALDKAGIAYVTLTGSTADRHAPVQRFQR 979 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++PL + G GLNL + ++ + WW+ E R + G + VF Sbjct: 980 GEVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAHRMGQDKPVF 1033 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA +I+E ++ K+ + + +L+ Sbjct: 1034 VYKLIAAGSIEEKIVALQDKKAALANSILSE 1064 >gi|113866590|ref|YP_725079.1| SNF2 family DNA/RNA helicase [Ralstonia eutropha H16] gi|113525366|emb|CAJ91711.1| Superfamily II DNA/RNA helicase, SNF2 family [Ralstonia eutropha H16] Length = 1023 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 67/188 (35%), Gaps = 18/188 (9%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS 79 + ++ ++ + A E + K++A + + A+ +V F Sbjct: 818 RIHVLAQLMRLRRAACDPRLVTPELSGQLSEGAKVRAFVELASELAASGHKTLVFSQFVD 877 Query: 80 DLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 L L++ + + + G+ + + G GLNL Sbjct: 878 FLQLLRQGLERAGLALQYLDGATPAAERTRRVAAFQAGEGDVFLISLKAGGFGLNLTA-A 936 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ WW+ E + R + G +R V VY LI TI+E ++ R K Sbjct: 937 DYVIIADPWWNPAA-----EDQAMGRAHRIGQQRPVTVYRLINAGTIEERIVDLHRDKRA 991 Query: 190 IQDLLLNA 197 + D LL A Sbjct: 992 LADGLLEA 999 >gi|28869303|ref|NP_791922.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852544|gb|AAO55617.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 918 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ + + + K+ K+ +L Sbjct: 690 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLME 749 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 750 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 809 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 810 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 863 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 864 ARGTVEEKIQRLQREKSALAAGVLDG 889 >gi|330967945|gb|EGH68205.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 918 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ + + + K+ K+ +L Sbjct: 690 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLME 749 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 750 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 809 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 810 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 863 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 864 ARGTVEEKIQRLQREKSALAAGVLDG 889 >gi|295092105|emb|CBK78212.1| Superfamily II DNA/RNA helicases, SNF2 family [Clostridium cf. saccharolyticum K10] Length = 1085 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 77/216 (35%), Gaps = 32/216 (14%) Query: 2 KQYHK--------FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD 53 K Y +++ +LQ ++ + Q+ E Sbjct: 863 KLYEAHAVRLMESLEKQSDEELQKGK---LQILAELTRLRQICCAPEMLYENYSET---S 916 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTI 101 K++ +I + + I++ F S + + Sbjct: 917 CKVETCMELIHQAMSGNHKILLFSQFTSVFPILEKRLLQEKIPYYELTGQTSKENRMRMT 976 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +++N G +P+ + G GLNL +I++ F WW+L R + G Sbjct: 977 EQFNSGDVPVFLISLKAGGTGLNLTA-ASIVIHFDPWWNLAAQ-----NQATDRAHRIGQ 1030 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ V V+ LIAQNTI+E +++ + K + +L+ Sbjct: 1031 EKQVTVFKLIAQNTIEEKIIKLQQEKQKLSSQILDG 1066 >gi|213967360|ref|ZP_03395508.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato T1] gi|302058432|ref|ZP_07249973.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato K40] gi|302131163|ref|ZP_07257153.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927661|gb|EEB61208.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato T1] Length = 918 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ + + + K+ K+ +L Sbjct: 690 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLME 749 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 750 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 809 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 810 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 863 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 864 ARGTVEEKIQRLQREKSALAAGVLDG 889 >gi|227893708|ref|ZP_04011513.1| Snf2 family helicase [Lactobacillus ultunensis DSM 16047] gi|227864568|gb|EEJ71989.1| Snf2 family helicase [Lactobacillus ultunensis DSM 16047] Length = 1180 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y ++L L G+ F ++ +K ++ E H K+ Sbjct: 959 LYQLQTQKLIAQLNGQEETDFKKSRFEIFAQIIKLREICCDPRLLYENYH---GKSNKLI 1015 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +I+ N I++ F S L +K I+E+N Sbjct: 1016 TTVDLIKTNLENGHKILLFSQFTSMLEILQSKLKKAKIPLFMLTGSTPKEKRQEYIREFN 1075 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + + G G+NL ++++ + WW+L E R + G K + Sbjct: 1076 TMEQPGVFLISLKAGGTGINLTS-ADVVIHYDPWWNLAA-----ENQATDRAHRIGQKHS 1129 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY ++ +NTI+E +++ + K+ + +L Sbjct: 1130 VKVYKMVTKNTIEERIIKLQQKKAELAQAILG 1161 >gi|255530347|ref|YP_003090719.1| SNF2-like protein [Pedobacter heparinus DSM 2366] gi|255343331|gb|ACU02657.1| SNF2-related protein [Pedobacter heparinus DSM 2366] Length = 1130 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 78/208 (37%), Gaps = 20/208 (9%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y +++ ++G+ + + Q+ N A ++K + + Sbjct: 909 EVYEAAVQDIKEYIEGKAEDELAKSSMYVLQGITRLRQICNSATLLKDDKFYGNASSKME 968 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEG 107 LE I K+ I+V F L ++ + G+T ++ + Sbjct: 969 VLLEQIESKSPNHKILVFSQFVGMLDLIRAQLGERGIAHEYLTGQTRNRQQVVNSFQDNP 1028 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +I + + G GLNL + + WW+ +E + R + G ++ V Sbjct: 1029 EIRVFLISLKAGGVGLNLTR-ADYVYLVDPWWNPA-----VENQAIDRTYRIGQEKNVVA 1082 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 LI +TI+E +++ TK + D L+ Sbjct: 1083 VRLICPDTIEEKIMKLQNTKRDLVDDLI 1110 >gi|296159842|ref|ZP_06842663.1| SNF2-related protein [Burkholderia sp. Ch1-1] gi|295889825|gb|EFG69622.1| SNF2-related protein [Burkholderia sp. Ch1-1] Length = 1150 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 79/231 (34%), Gaps = 39/231 (16%) Query: 3 QYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q ++ + + + + +K Q+ K + H Sbjct: 902 LYETVRTAMQEKVRAAVSAQGLARSHIIVLDALLKLRQVCCDPRLVRTLKAAGDAHETHD 961 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 K+ L ++ + +++ F L+ + +A + Sbjct: 962 RTDRIEKGARAMRSAKLDLLLSMLPELIEEGRRVLLFSQFTGMLSLIAEALEEAAIPYVI 1021 Query: 96 ------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ + +G++PL + G GLNL + ++ + WW+ E Sbjct: 1022 LTGDTADRVTPVERFQQGEVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----E 1075 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1076 NQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILSEDAA 1126 >gi|229489423|ref|ZP_04383286.1| Non-specific serine/threonine protein kinase [Rhodococcus erythropolis SK121] gi|229323520|gb|EEN89278.1| Non-specific serine/threonine protein kinase [Rhodococcus erythropolis SK121] Length = 609 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 67/210 (31%), Gaps = 23/210 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + G I N + Q+ N + K+ Sbjct: 378 RIYRSAVADAFDSGLGTGIARRGNILALLTTLKQVCNHPAQVTGDTDDLYGRSGKLDRAT 437 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAF------------PQGRTLDKDPCTIQEWNE 106 +I + + ++ + + L + G DK + + Sbjct: 438 EMISEIVDDGDRALIFTQYRTMGEMLSRHLGAELGIGAVPFLHGGLNTDKRDAMVDAFQN 497 Query: 107 GK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P+L + G GLNL + +V + WW+ +E R + G KR Sbjct: 498 DTDSPPVLILSLRAAGFGLNLTR-ASHVVHYDRWWNPA-----VEDQATDRAHRIGQKRT 551 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V+ L+ T+++ + +K + D + Sbjct: 552 VNVHTLVTGGTVEDHIAAMHESKRAVADAV 581 >gi|225871163|ref|YP_002747110.1| helicase [Streptococcus equi subsp. equi 4047] gi|225700567|emb|CAW95068.1| putative helicase [Streptococcus equi subsp. equi 4047] Length = 1034 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 23/206 (11%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q L + S + Q+ + + + + K+ L ++ Sbjct: 819 RQMQERLSAATDDDINRSKLEILSGITRLRQICDTPSLFMDY----QGGSGKLDNLRTLL 874 Query: 64 --EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPL 111 K N ++ F LA +++ Q + + +N G Sbjct: 875 LQIKENGHRALLFSQFKGMLALVKQEMDQLGLSSYTITGSTPANDRQEMTRAFNNGSKDA 934 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ ++R + G + V VY LI Sbjct: 935 FLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQEDNVEVYRLI 988 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ K + +L+ Sbjct: 989 TRGTIEEKILELQENKRHLITTVLDG 1014 >gi|330881511|gb|EGH15660.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 337 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ ++ + K+ K+ +L Sbjct: 109 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQGMPVNSKQGTSGKLNSLME 168 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 169 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 228 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 229 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 282 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 283 ARGTVEEKIQRLQREKSALAAGVLDG 308 >gi|313637601|gb|EFS03000.1| DNA/RNA helicase protein [Listeria seeligeri FSL S4-171] Length = 512 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 80/204 (39%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L + E + + Q+ + E + K+ L I+ Sbjct: 292 EKIQADLAESNGNASEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 348 Query: 65 --KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK-DPCTIQEWNEGKIPLL 112 + N +++ F LA ++ + G+T K + +NEG+ + Sbjct: 349 TARENGKRLLIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPAKTRLDMVNSFNEGENDIF 408 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 409 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 462 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + + K + D L+ Sbjct: 463 KGTIEERIFELQKKKQALVDELIQ 486 >gi|283798366|ref|ZP_06347519.1| superfamily II DNA/RNA helicase, SNF2 family [Clostridium sp. M62/1] gi|291073950|gb|EFE11314.1| superfamily II DNA/RNA helicase, SNF2 family [Clostridium sp. M62/1] Length = 1044 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 74/208 (35%), Gaps = 23/208 (11%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + + GE + + Q+ E + K++ Sbjct: 825 KLYGANVLRLRQELEAGGELPGKIQILAGLTRLRQICCDPSLCYENYKGE---SAKLETC 881 Query: 60 EVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEG 107 ++ A +++ F S ++K + + ++ ++ G Sbjct: 882 LALLSGAVAAGHRVLLFSQFASMFPIIKKRLDRAGIGCFVLTGATSKEERSRLTAKFYAG 941 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +P+ + G GLNL ++++ + WW+ R + G K+ V V Sbjct: 942 DVPVFLISLKAGGTGLNLTA-ADVVIHYDPWWNAAAQD-----QATDRAHRIGQKKQVTV 995 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + LI + T++E +L +KS + + ++ Sbjct: 996 FRLIMKGTVEESILHLQESKSELAERIV 1023 >gi|312197752|ref|YP_004017813.1| SNF2-related protein [Frankia sp. EuI1c] gi|311229088|gb|ADP81943.1| SNF2-related protein [Frankia sp. EuI1c] Length = 1045 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 69/214 (32%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ L+ + + + Q+ N + + K+ L Sbjct: 814 LYRAVVDDMMERLRDASSPVRRNGVVLAAMTRLKQVCNHPAHLLGDGSALAGRSGKLARL 873 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNE 106 E ++ + + F A L G + I+ + Sbjct: 874 EELLTQVVAGGERALCFTQFARFGAMLAPYLSTRLGVEVSFLHGGLRAAERDALIERFQT 933 Query: 107 GKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G P + + G G+NL N +V WW+ +E R + G +R V Sbjct: 934 GTGPGVFLLSLKAGGTGVNLTA-ANHVVHVDRWWNPA-----VEAQATDRAHRIGQRRDV 987 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +V L+ T++E + + L K+ + ++ + Sbjct: 988 WVRTLLCMGTLEERIDRILVDKAALARTVVGGGE 1021 >gi|331019536|gb|EGH99592.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 918 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 83/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ + + + K+ K+ +L Sbjct: 690 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNHDMPVNSKQGTSGKLNSLME 749 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 750 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 809 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 810 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 863 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 864 ARGTVEEKIQRLQREKSALAAGVLDG 889 >gi|328957397|ref|YP_004374783.1| putative ATP-binding SNF2 helicase or protein kinase [Carnobacterium sp. 17-4] gi|328673721|gb|AEB29767.1| putative ATP-binding SNF2 helicase or protein kinase [Carnobacterium sp. 17-4] Length = 1075 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 81/207 (39%), Gaps = 23/207 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + +E + G + + Q+ + ++ E K++ L+ Sbjct: 852 AYLQRIQESVNSMNGAEFKKNRIEILAGLTRLRQICCDPKLFIDDY---EGSSGKLEQLK 908 Query: 61 VIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK 108 I+ + N I++ F S LA ++ + + ++N G+ Sbjct: 909 ETIQTARENGRRILIFSQFTSMLAIIEKELDEQEVETFYLSGQTKPKERIEMVNKFNAGE 968 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G ++++ + LWW+ +E R + G K+ V V Sbjct: 969 KDVFLISLKAGGTGLNLT-GADMVILYDLWWNPA-----VEEQAAGRAHRIGQKKVVQVL 1022 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 LIA+ TI+E + Q + K + D ++ Sbjct: 1023 RLIAEGTIEEKIDQLQQEKKALFDQII 1049 >gi|312866392|ref|ZP_07726610.1| SNF2 family N-terminal domain protein [Streptococcus downei F0415] gi|311098086|gb|EFQ56312.1| SNF2 family N-terminal domain protein [Streptococcus downei F0415] Length = 1036 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 25/209 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 ++ +L + I S + Q+ + + + KI +L ++ Sbjct: 819 DSVRQSSDAELNRQKI---QILSGITRLRQICDTPALFMDYGG----SSGKIDSLHQLLS 871 Query: 65 KAN--AAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + ++ F L + + +N G + Sbjct: 872 QIQESGHRTLIFSQFRQMLDIAEDLVAQLGMTSYKITGSTPAETRQEMTKAFNNGSKDVF 931 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ LWW+ ++R + G K +V VY LI Sbjct: 932 LVSLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRLGQKESVEVYRLIT 985 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E +L+ +K + +L+ + Sbjct: 986 RGTIEEKILELQDSKRNLVTTVLDGNESR 1014 >gi|159902591|ref|YP_001549935.1| SNF2 family DNA/RNA helicase [Prochlorococcus marinus str. MIT 9211] gi|159887767|gb|ABX07981.1| Superfamily II DNA/RNA helicase, SNF2 family [Prochlorococcus marinus str. MIT 9211] Length = 1067 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 77/217 (35%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKE---VHDEKIK 57 Y+K ++ I ++ + Q+ N +EK+ + + K++ Sbjct: 836 LYNKTVDNTLQEIARSPIGQRHAKTLGLLTRLKQICNHPALALKEKNISDDFGIRSTKLQ 895 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEW 104 LE +++ A ++ F LQ G + ++ Sbjct: 896 RLEELLDVIFATEDRALLFTQFAEWGHLLQAYLEKKWGHSILFLHGGTRKIDRQSMVDQF 955 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E L + G GLNL N ++ WW+ +E R + G K Sbjct: 956 QEDPRGPKLFLLSLKAGGIGLNLTR-ANHVLHIDRWWNPA-----VENQATDRAYRIGQK 1009 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +V V+ IA +++E + Q + KS + + ++ A + Sbjct: 1010 NSVMVHKFIATGSVEEKIDQMITEKSKLAENIIGAGE 1046 >gi|303238092|ref|ZP_07324632.1| SNF2 family N-terminal domain protein [Prevotella disiens FB035-09AN] gi|302481727|gb|EFL44782.1| SNF2 family N-terminal domain protein [Prevotella disiens FB035-09AN] Length = 1337 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M +Y + + ++ E + ++ ++ + QLA D E K A Sbjct: 1119 MARYELQRAQAEAMVEVEKNVSVSTLAEITRLRQLACSTALVD---KKWEGVSSKTLAFI 1175 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGK 108 + E N +V F S A ++K + + K ++E+ EG Sbjct: 1176 DLAESLNDSGNRALVFSQFTSYFAEIKKMMDKTHLPYLYLDGSTPMKKREQLVREFQEGD 1235 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N ++ WW+ Q R + G ++ V VY Sbjct: 1236 CPFFLISLKAGGLGLNLT-GANYVIHLDPWWNPAIEQ-----QATDRAYRIGQEQDVTVY 1289 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIAQ+TI+E +L+ +TK + D LL Sbjct: 1290 RLIAQHTIEEKILRLHKTKRDLADSLLEG 1318 >gi|157694030|ref|YP_001488492.1| SNF2 family helicase [Bacillus pumilus SAFR-032] gi|157682788|gb|ABV63932.1| SNF2 family helicase [Bacillus pumilus SAFR-032] Length = 925 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 26/214 (12%) Query: 3 QYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK---EVHDEKI 56 Y + ++ L G +A S + Q+ + Y +E K+ Sbjct: 694 LYEQLVKDTFEHMASLTGMQRKAI-ILSMLGRLKQICDHPALYLKESGTDVKLLKRSLKM 752 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQE 103 L ++ ++ + +++ + + + Sbjct: 753 DKLAELLKAIHEQGESCLIFTQYIGMGNMIKQLAEKMFGEPVQFLNGSLSKQERDKMVDR 812 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + +L + G GLNL N ++ + WW+ +E R + G KR Sbjct: 813 FQKKEFNILILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKR 866 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ +I TI+E + Q L TK T+ D ++ + Sbjct: 867 FVHVHKMITTGTIEEKIDQMLETKQTLNDQIIQS 900 >gi|196250406|ref|ZP_03149098.1| Non-specific serine/threonine protein kinase [Geobacillus sp. G11MC16] gi|196210065|gb|EDY04832.1| Non-specific serine/threonine protein kinase [Geobacillus sp. G11MC16] Length = 926 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 73/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + + + + A Q+ N Y +E+ +++ K++ Sbjct: 695 LYEQLVNDTLERAKAASPFARRGLILQMLNGIKQICNHPALYLKERSPRQLVERSHKLEK 754 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L ++E+ N ++ + +Q+ + E+ Sbjct: 755 LVELVEQIRANDESCLIFTQYVRMGEMIQELLSDLFDEPVLFLNGSVPKPTRDRMVDEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K P+ + G GLNL N ++ F WW+ +E R + G + V Sbjct: 815 ARKAPIFLLSLKAGGTGLNLTA-ANHVIHFDRWWNPA-----VENQATDRAYRIGQTKFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI TI+E + + L K + D++ Sbjct: 869 HVHKLITTGTIEEKIDEMLEQKQALADVITEG 900 >gi|116074100|ref|ZP_01471362.1| hypothetical protein RS9916_36657 [Synechococcus sp. RS9916] gi|116069405|gb|EAU75157.1| hypothetical protein RS9916_36657 [Synechococcus sp. RS9916] Length = 1060 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 70/217 (32%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIK 57 Y K + + + K Q+ N +E+ + K++ Sbjct: 830 LYAKTVEDTLDAIARAPRGQRHGQVLGLLTKLKQICNHPALALKEEQATDDFLQRSAKLQ 889 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 LE I+++ ++ F LQ + + + + + Sbjct: 890 RLEEILDEVIEAGDRALLFTQFAEWGHLLQGYLQRRWRSEVPFLSGSTSKKERQAMVDRF 949 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E L + G GLNL + + WW+ +E R + G Sbjct: 950 QEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDRAYRIGQT 1003 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ I +++E + + +R KS + + ++ + + Sbjct: 1004 NRVMVHKFITSGSVEEKIDRMIREKSRLAEDIIGSGE 1040 >gi|325695119|gb|EGD37021.1| Snf2 family protein [Streptococcus sanguinis SK150] Length = 1033 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ E K+++L ++ Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDY---EGESGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIESELDKMGMESFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ ++ + Sbjct: 987 TRGTIEEKIQELQESKRNLVSTILDGVEAK 1016 >gi|194016601|ref|ZP_03055215.1| SNF2 family helicase [Bacillus pumilus ATCC 7061] gi|194012074|gb|EDW21642.1| SNF2 family helicase [Bacillus pumilus ATCC 7061] Length = 925 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 26/214 (12%) Query: 3 QYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK---EVHDEKI 56 Y + ++ L G +A S + Q+ + Y +E K+ Sbjct: 694 LYEQLVKDTFEHMASLTGMQRKAI-ILSMLGRLKQICDHPALYLKESGTDVKLLKRSLKM 752 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQE 103 L ++ ++ + +++ + + + Sbjct: 753 DKLAELLKAIHEQGESCLIFTQYIGMGNMIKQLAEKMFGEPVQFLNGSLSKQERDKMVDR 812 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + +L + G GLNL N ++ + WW+ +E R + G KR Sbjct: 813 FQKKEFNILILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQKR 866 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ +I TI+E + Q L TK T+ D ++ + Sbjct: 867 FVHVHKMITTGTIEEKIDQMLETKQTLNDQIIQS 900 >gi|157150075|ref|YP_001449829.1| Snf2 family protein [Streptococcus gordonii str. Challis substr. CH1] gi|157074869|gb|ABV09552.1| Snf2 family protein [Streptococcus gordonii str. Challis substr. CH1] Length = 1029 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 76/210 (36%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + E N + S ++ Q+ + + +E + K+ +L ++ Sbjct: 812 QQMQERVRSATDEELNRDKIEILSGLMRLRQICDTPALFLDEY---QGDSGKLDSLRELL 868 Query: 64 EKAN--AAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ + +++ F L +N+G+ Sbjct: 869 EQIHSSNHRVLIFSQFRGMLDLIEQELQSLEMESFKITGSTPAKDRQEMTTAFNDGQKDA 928 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY LI Sbjct: 929 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQERNVEVYRLI 982 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + Sbjct: 983 TRGTIEEKIQELQESKKNLISTILDGTESR 1012 >gi|147921752|ref|YP_684426.1| DNA/RNA helicase [uncultured methanogenic archaeon RC-I] gi|110619822|emb|CAJ35100.1| putative DNA/RNA helicase (SNF2 family) [uncultured methanogenic archaeon RC-I] Length = 1042 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEK----HWKEVHDEKI 56 Y + + + +K Q+ + Y + + K+ Sbjct: 806 LYEAIVENMLKSIDKATAMQRRGIVLASLMKLKQVCDHPSLYIKTGAVTDDKTLIRSGKL 865 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQE 103 K L ++E+A +++ F L+ G + Sbjct: 866 KRLTELLEEALAEGDSVLIFTQFVEMGEMLKAYLQSTFDEEALFLHGGVPQKARDKMVLR 925 Query: 104 W-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + + G GLNL + + F WW+ +E R + G Sbjct: 926 FGEKDGPRIFIVSLKAGGVGLNLTK-ASHVFHFDRWWNPA-----VENQATDRAYRIGQS 979 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V V+ + T++E + + + +K + +L Sbjct: 980 KNVLVHKFVCAGTLEEKIDELIESKKALSANILG 1013 >gi|163791108|ref|ZP_02185528.1| Snf2 family protein [Carnobacterium sp. AT7] gi|159873664|gb|EDP67748.1| Snf2 family protein [Carnobacterium sp. AT7] Length = 1075 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 86/220 (39%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + +E + G + + Q+ + ++ E K++ L+ Sbjct: 852 AYLQRIQESVNSMNGAEFKKNRIEILAGLTRLRQICCDPKLFIDDY---EGDSGKLEQLK 908 Query: 61 VIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK 108 ++ + N I++ F S LA ++ + + +N G+ Sbjct: 909 ETVQTARENGRRILIFSQFTSMLAIIEKELAQQSVETFYLSGQTKPKERIEMVNRFNAGE 968 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL G ++++ + LWW+ +E R + G K+ V V Sbjct: 969 KEVFLISLKAGGTGLNLT-GADMVILYDLWWNPA-----VEEQAAGRAHRIGQKKVVQVL 1022 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL---NALKKETIHV 205 LIA+ TI+E + Q + K + D ++ ++++E + Sbjct: 1023 RLIAEGTIEEKIDQLQQEKKALFDQIITEDGSIQREGSQL 1062 >gi|219668528|ref|YP_002458963.1| non-specific serine/threonine protein kinase [Desulfitobacterium hafniense DCB-2] gi|219538788|gb|ACL20527.1| Non-specific serine/threonine protein kinase [Desulfitobacterium hafniense DCB-2] Length = 1082 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 74/213 (34%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + ++ +L G + + Q+ + + + + K Sbjct: 858 KIYLAYLQQTKSQIAQELATHGFAKSQIQILAALTRLRQICSHPGMFIDNYTGE---SGK 914 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 + + ++E + ++V F S L + + + Sbjct: 915 MLLFQELLEDSLAGGHRVLVFSQFTSMLDIIGEYLHSENIDYFYLSGSTKALERSRMAAS 974 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLNL G + ++ F WW+ +E R + G + Sbjct: 975 FNNGEGQVFLISLKAGGTGLNLT-GADTVIHFDPWWNPA-----VEDQATDRAHRIGQQN 1028 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +V V L+ Q TI+E V K + D ++ Sbjct: 1029 SVQVIKLLTQGTIEEKVNALQAKKKKLIDSVIQ 1061 >gi|226305488|ref|YP_002765448.1| helicase [Rhodococcus erythropolis PR4] gi|226184605|dbj|BAH32709.1| putative helicase [Rhodococcus erythropolis PR4] Length = 609 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 67/210 (31%), Gaps = 23/210 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + G I N + Q+ N + K+ Sbjct: 378 RIYRSAVADAFDTGLGTGIARRGNILALLTTLKQVCNHPAQVTGDTDDLYGRSGKLDRAT 437 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAF------------PQGRTLDKDPCTIQEWNE 106 +I + + ++ + + L + G DK + + Sbjct: 438 EMIAEIVDDGDRALIFTQYRTMGEMLSRHLGSELGIGAIPFLHGGLNTDKRDAMVDAFQN 497 Query: 107 GK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P+L + G GLNL + +V + WW+ +E R + G KR Sbjct: 498 DTDSPPVLILSLRAAGFGLNLTR-ASHVVHYDRWWNPA-----VEDQATDRAHRIGQKRT 551 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V+ L+ T+++ + +K + D + Sbjct: 552 VNVHTLVTGGTVEDHIAAMHESKRAVADAV 581 >gi|171780271|ref|ZP_02921175.1| hypothetical protein STRINF_02059 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281619|gb|EDT47054.1| hypothetical protein STRINF_02059 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 1027 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 25/207 (12%) Query: 5 HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q E +I S + Q+ + + + + K+ +L + Sbjct: 812 RQMQ-ETIAGASDADINRRKIEILSGITRLRQICDTPALFMDY----QGESGKLDSLRDL 866 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP 110 + + N ++ F L + + + +N G Sbjct: 867 LTQIKENGHRALIFSQFRGMLDIAEKEIEEIGLTSYKITGSTPANARQEMTRAFNNGSKD 926 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ ++R + G K V VY L Sbjct: 927 TFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQKENVEVYRL 980 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + TI+E +L+ +K + +L+ Sbjct: 981 ITRGTIEEKILEMQESKKNLVTTVLDG 1007 >gi|319950443|ref|ZP_08024358.1| helicase [Dietzia cinnamea P4] gi|319435907|gb|EFV91112.1| helicase [Dietzia cinnamea P4] Length = 935 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 74/223 (33%), Gaps = 26/223 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y ++ ++ A S Q+ N +Y + K+ Sbjct: 700 LYQAVVEDMMEQVKESEGTARKGAILSGLTALKQVCNHPAHYLGDGSALLRGGRHRSGKL 759 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARL-----------QKAFPQGRTLDKDPCTIQE 103 AL+ ++ + +++ + + + G T ++E Sbjct: 760 AALDEVLTEILDAGEKVLLFTQYRAFGDLILPLLERRAASSVPFLHGGVTAAGRAQMVEE 819 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + P++ A + G GL L N +V WW+ +E R + G Sbjct: 820 FQSTQGPPVMLASLRAGGTGLTLTE-ANHVVHLDRWWNPA-----VENQATDRVHRIGQT 873 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R V V L+A T+++ + + L K + +L L L + Sbjct: 874 RRVQVRTLVAPGTVEDRIDELLEAKRDLAELTLGPLAGALTEL 916 >gi|325299080|ref|YP_004258997.1| SNF2-like protein [Bacteroides salanitronis DSM 18170] gi|324318633|gb|ADY36524.1| SNF2-related protein [Bacteroides salanitronis DSM 18170] Length = 1168 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 77/219 (35%), Gaps = 28/219 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFN--------SASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 YH+ +++G + + Q+ N + + + + Sbjct: 940 LYHRTLEAAMAEIKGIDTTDHESLFKRQGLILQMILALKQICNHPAQFLKNGNARIELFG 999 Query: 55 KIKALEVII--EKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTI 101 K + L + AN ++V F L + + G + + + Sbjct: 1000 KAEMLLDRLEGIVANGEKVLVFTQFREMGDLLVRFIEERLGQHPLFYHGGCCVKQRQEMV 1059 Query: 102 QEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + + G GLNL + ++ + LWW+ +E R + G Sbjct: 1060 ERFQNLRSDKIFILSLKAAGTGLNLTA-ASHVIHYDLWWNPA-----VEAQATDRAYRIG 1113 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +R V V+ I ++T +E + ++ K + D+ + + + Sbjct: 1114 QQRNVMVHRFITKDTFEERINDMIQQKKHLADMTVASGE 1152 >gi|255020423|ref|ZP_05292489.1| helicase, SNF2 family [Acidithiobacillus caldus ATCC 51756] gi|254970136|gb|EET27632.1| helicase, SNF2 family [Acidithiobacillus caldus ATCC 51756] Length = 1165 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 80/216 (37%), Gaps = 24/216 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKA 58 Y RE ++GE+ + Q+ N +Y E+ K Sbjct: 939 LYESVVRESLQVIRGESDTFHRKGLVLQMILALKQVCNHPAHYLKEQGDRGPSISGKASL 998 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWN 105 L ++E N ++ F L+ G T + + ++ Sbjct: 999 LLDLLEPILANHEKCLIFTQFREMGELLRPWIREATGHLPPFLHGGVTRKQRDVMVDKFQ 1058 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + +L + G GLNL + +V + LWW+ +E R + G +R Sbjct: 1059 QDPRERILILSLKAGGTGLNLTA-ASHVVHYDLWWNPA-----VEAQATDRAYRIGQQRN 1112 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ LI + T +E + + ++TK + +L + A ++ Sbjct: 1113 VQVHRLITRATFEERINELMKTKRDLANLTVGAGEQ 1148 >gi|291457361|ref|ZP_06596751.1| protein, SNF2 family [Bifidobacterium breve DSM 20213] gi|291381196|gb|EFE88714.1| protein, SNF2 family [Bifidobacterium breve DSM 20213] Length = 1358 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L+ ++ + Q+ + + K+ Sbjct: 1121 KLYAAHEQRLRMQLEHSEEAEFNTSKIRILAELTRLRQICCDPRLLYADAKDQ---SAKL 1177 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 A+ ++ ++ F S L K + ++ Sbjct: 1178 AAIAELVETCVNEGKKALIFSQFTSFLDLIAERFDAQGLRYYTITGSTPKRKRLELVDQF 1237 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P + GLNL G ++++ WW+ Q R + G Sbjct: 1238 NADDTPAFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQDQA-----ADRAHRIGQTED 1291 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ TKS + +A Sbjct: 1292 VNVYQVVAKDTIEERILELQHTKSELARQFTDA 1324 >gi|325475354|gb|EGC78539.1| Snf2 family protein [Treponema denticola F0402] Length = 1216 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 72/216 (33%), Gaps = 23/216 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + G + Q+ N YD+E + + K Sbjct: 990 LAIYENLVETELHKVMGAETKIERQAYVLKLLTALKQVCNHPRAYDKETPVEMKYSGKAA 1049 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEW 104 L ++ + ++ I+ + L L+ K + + Sbjct: 1050 LLIELLNEIISSGEKAIIFSQYVGTLDILKNIIQKELGTEPLLLHGQMPASKRKKAVDVF 1109 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL N ++ F LW++ +E R + G + Sbjct: 1110 QTDPAYRIFLISLKAGGTGLNLTA-ANRVIHFDLWYNPA-----VEDQATDRAFRIGQTK 1163 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VFV+ LI T +E + + ++ K I + ++A + Sbjct: 1164 NVFVHRLICSGTFEEKIDEMIQKKREISGMSISAGE 1199 >gi|281355238|ref|ZP_06241732.1| SNF2-related protein [Victivallis vadensis ATCC BAA-548] gi|281318118|gb|EFB02138.1| SNF2-related protein [Victivallis vadensis ATCC BAA-548] Length = 884 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 69/211 (32%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + + +L+ E + ++ QL N Y E +K K L Sbjct: 653 LYQQVVDRMRRELEAADEFQKKGVVLKSLMQFKQLCNHPAQYTGEGDFKAEESGKFLELA 712 Query: 61 VI--IEKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 + ++V F R G ++ ++ + E Sbjct: 713 ELAEKIAMKQEKVLVFTQFREMTDPLHELLSRVFGRPGLILHGGTSIRARARLVEAFQKE 772 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + G GLNL + ++ F WW+ +E R + G R V Sbjct: 773 EGPPFFVLSLKAAGTGLNLTA-ASHVIHFDRWWNPA-----VENQATDRAYRIGQHRNVL 826 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I TI+E + + +K + D ++ + Sbjct: 827 VHKFICSGTIEEKINSLIWSKRKLADSVVTS 857 >gi|138896831|ref|YP_001127284.1| helicase [Geobacillus thermodenitrificans NG80-2] gi|134268344|gb|ABO68539.1| Helicase, putative [Geobacillus thermodenitrificans NG80-2] Length = 926 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 73/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + + + + A Q+ N Y +E+ +++ K++ Sbjct: 695 LYEQLVNDTLERAKAASPFARRGLILQMLNGIKQICNHPALYLKERSPRQLVERSHKLEK 754 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L ++E+ N ++ + +Q+ + E+ Sbjct: 755 LVELVEQIRANDESCLIFTQYVRMGEMIQELLSDLFDEPVLFLNGSVPKPTRDRMVDEFQ 814 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K P+ + G GLNL N ++ F WW+ +E R + G + V Sbjct: 815 ARKAPIFLLSLKAGGTGLNLTA-ANHVIHFDRWWNPA-----VENQATDRAYRIGQTKFV 868 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI TI+E + + L K + D++ Sbjct: 869 HVHKLITTGTIEEKIDEMLEQKQALADVITEG 900 >gi|119357048|ref|YP_911692.1| SNF2-related protein [Chlorobium phaeobacteroides DSM 266] gi|119354397|gb|ABL65268.1| SNF2-related protein [Chlorobium phaeobacteroides DSM 266] Length = 1007 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 76/228 (33%), Gaps = 34/228 (14%) Query: 1 MKQYHKFQRE-------LYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKH 47 MKQY RE + +LQ + A + VK Q+ N V + + Sbjct: 763 MKQYCTLTREQASLYKAVIDELQEKIETAEGIDRRGLVLALLVKLKQVCNHPVQFLGDNS 822 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTL 94 E K++ L ++ + +V F + Sbjct: 823 SVEHRSGKLQRLTELLSEIRECGQRTLVFTQFMEMGKILQRYLQELFGEEVFFLHGSLSR 882 Query: 95 DKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K I + +G+ + + G LNL N +V + WW+ +E Sbjct: 883 KKRDAMIDAFQQGEHAPHIFILSLKAGGSCLNLTN-ANHVVHYDRWWNPA-----VENQA 936 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G KR V V+ I T++E + + + K + +L ++ Sbjct: 937 TDRAFRIGQKRNVEVHKFITAGTLEERIDEMIDKKRAVSGSVLGTGEQ 984 >gi|187919690|ref|YP_001888721.1| Non-specific serine/threonine protein kinase [Burkholderia phytofirmans PsJN] gi|187718128|gb|ACD19351.1| Non-specific serine/threonine protein kinase [Burkholderia phytofirmans PsJN] Length = 1155 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 42/234 (17%) Query: 3 QYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKE------ 50 Y Q ++ + + + + +K Q+ K E Sbjct: 904 LYETVRTAMQEKVRAAVSAQGLARSHIIVLDALLKLRQVCCDPRLVKTLKAAAEANDVPE 963 Query: 51 --------------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK-------- 86 + K+ L ++ + +++ F L+ + + Sbjct: 964 KSDRTGKIEKGARAMRSAKLDLLLSMLPELIEEGRRVLLFSQFTGMLSLIAQALEEVGIP 1023 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ + +G++PL + G GLNL + ++ + WW+ Sbjct: 1024 YMMLTGDTTDRVTPVERFQKGEVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA--- 1079 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 E R + G + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1080 --ENQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILSEDAA 1131 >gi|309812493|ref|ZP_07706246.1| SNF2 family N-terminal domain protein [Dermacoccus sp. Ellin185] gi|308433548|gb|EFP57427.1| SNF2 family N-terminal domain protein [Dermacoccus sp. Ellin185] Length = 1119 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 77/210 (36%), Gaps = 21/210 (10%) Query: 2 KQYHK-FQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + +RE L L+ + + + +LA D+E + V K++ Sbjct: 899 RVYKRHLRREQQRLMGLLKDPDANRVEILAALTRLRRLALDPALVDDEFAGRSV-SRKVE 957 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEG 107 + + + +V F LA +++ + + E+ G Sbjct: 958 TVVQQLAEIAAEGHRALVFSQFTDFLAIVREAAADAGVSTTYLDGSTRNRQQVVDEFKSG 1017 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + F + G GL L + ++ WW+ E + R + G + V V Sbjct: 1018 EADAFFISLKAGGTGLTLTE-ADYVIVLDPWWNPAA-----EDQAIDRAHRIGQTKHVMV 1071 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y ++ TI+E V++ K + D +++A Sbjct: 1072 YRYVSAGTIEEKVMELQEKKRKLFDDVVDA 1101 >gi|269119290|ref|YP_003307467.1| SNF2-related protein [Sebaldella termitidis ATCC 33386] gi|268613168|gb|ACZ07536.1| SNF2-related protein [Sebaldella termitidis ATCC 33386] Length = 1125 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 69/202 (34%), Gaps = 19/202 (9%) Query: 8 QRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 ++E+ +++ E + S + Q+ + + E + L + Sbjct: 912 KKEIENEIKNEKLSRSQIKIFSLLTRLRQICCHPKLFIDNYAHSSGKFETLFELFDDLIS 971 Query: 66 ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 N +V F + L + +N G P+ Sbjct: 972 GNH-KTLVFSQFTTMLKLISGELKKKGIEHFYLDGSMKARDRLELVNSFNAGNTPIFLIS 1030 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL G + ++ WW+ +E R + G K +V V LI + T Sbjct: 1031 LKAGGTGLNLT-GSDTVIHVDPWWNPS-----VENQASDRSHRIGQKNSVQVIKLITKGT 1084 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 I+E +++ K + D +L + Sbjct: 1085 IEEKIMKLQNKKKKLIDNVLTS 1106 >gi|266620561|ref|ZP_06113496.1| SNF2 family protein [Clostridium hathewayi DSM 13479] gi|288867854|gb|EFD00153.1| SNF2 family protein [Clostridium hathewayi DSM 13479] Length = 1154 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 76/211 (36%), Gaps = 26/211 (12%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y ++L L ++ + ++ QL E + K+ Sbjct: 924 EIYEARVQKLLDSLSKQSQEEFRVGKLQILAELTHLRQLCCDPSLVYENYN---GGAAKV 980 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEW 104 +++ I++ F S L + + +K ++ + Sbjct: 981 DTCVELVKNAVEAGNKILLFSQFTSMLDIIRKRLDEEEIGYYILTGAVSKEKRSELVRAF 1040 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 NE P+ + G GLNL +I++ F WW+ R + G ++ Sbjct: 1041 NEDDTPVFLISLKAGGTGLNLTA-ASIVIHFDPWWNQAAQ-----NQATDRAHRIGQQQV 1094 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY LI ++T++E +L+ K+ + + ++ Sbjct: 1095 VTVYKLIMKDTLEEKILEMQEKKAGLSEEII 1125 >gi|262203175|ref|YP_003274383.1| SNF2-like protein [Gordonia bronchialis DSM 43247] gi|262086522|gb|ACY22490.1| SNF2-related protein [Gordonia bronchialis DSM 43247] Length = 988 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 27/218 (12%) Query: 3 QYHKFQRELYCDLQGENIEAF---NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y EL L+ + A N + + Q+ N +Y + Sbjct: 753 LYRAVIDELMEALRDKQQRALRRRNVLAALTRLKQICNHPAHYLADGTAMAPRGRHRSGK 812 Query: 60 EVIIEK------ANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQ 102 ++ +V F L G + + Sbjct: 813 VELLADTLTTLIDEGDRALVFTQFAAFGEMLSGWLTDTLGTEIPLLHGGLGRSERDRMVA 872 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + P++ A + G GLNL N +V WW+ +E R + G Sbjct: 873 GFQGDDGPPVMLATLKAGGTGLNLTA-ANHVVHVDRWWNPA-----VEDQATDRAYRIGQ 926 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V V+ I TI+E + + K + L + A + Sbjct: 927 DQRVDVHRFICVGTIEERIDDMITRKRELSQLTVAAGE 964 >gi|262200392|ref|YP_003271600.1| SNF2-like protein [Gordonia bronchialis DSM 43247] gi|262083739|gb|ACY19707.1| SNF2-related protein [Gordonia bronchialis DSM 43247] Length = 1159 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 71/214 (33%), Gaps = 24/214 (11%) Query: 2 KQYH---KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y +R+ L G+ F QL+ A D V+ K+ Sbjct: 938 KIYDTRLARERQKVLGLLGDWEKNRFQVFRSLSMLRQLSLHAALVD--SSHDSVNSAKVD 995 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN 105 L + +V F L L+ + + +Q + Sbjct: 996 YLIEQLPGLVDEGHSSLVFSQFTGFLDILRAHLDAEGIVYSYLDGSMSAKQRAAAVQRFR 1055 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL + WW+ E V R + G +R V Sbjct: 1056 SGAAQVFLISLKAGGFGLNLTE-ADYCFVCDPWWNPAA-----EAQAVDRAHRIGQQRPV 1109 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L++ +TI+E V++ K + D +++ + Sbjct: 1110 NVYRLVSADTIEERVVRLQERKRALFDAVVDDGE 1143 >gi|146308259|ref|YP_001188724.1| non-specific serine/threonine protein kinase [Pseudomonas mendocina ymp] gi|145576460|gb|ABP85992.1| Non-specific serine/threonine protein kinase [Pseudomonas mendocina ymp] Length = 876 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 76/211 (36%), Gaps = 23/211 (10%) Query: 4 YHKFQ----RELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHW-KEVHDEKI 56 Y + +++ ++ + + + ++ Q + K+ Sbjct: 651 YETLRLAMDQKVRDEIARQGLARSHIVILEALLRLRQSCCDLRLLGDAGSQLTAADSGKL 710 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLA--------RLQKAFPQGRTLDKDPCTIQEWNE 106 AL ++E+ +++ F S LA R + ++ + Sbjct: 711 SALLDMLEELVDEGRRVLLFSQFTSMLALIEAELQARKIAYAKLTGSTQDRRTPVERFQA 770 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ P+ + G GLNL + ++ F WW+ E R + G + VF Sbjct: 771 GEFPVFLISLKAGGSGLNLTA-ADTVIHFDPWWNPAA-----EAQASDRAYRIGQDKPVF 824 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI + +++E + Q + K+++ +L Sbjct: 825 VYKLITRGSVEEKIQQLQQAKASLARGVLEG 855 >gi|261209238|ref|ZP_05923630.1| Snf2 family protein [Enterococcus faecium TC 6] gi|289565987|ref|ZP_06446425.1| Snf2 family protein [Enterococcus faecium D344SRF] gi|294616209|ref|ZP_06696006.1| Snf2 family protein [Enterococcus faecium E1636] gi|260076784|gb|EEW64519.1| Snf2 family protein [Enterococcus faecium TC 6] gi|289162185|gb|EFD10047.1| Snf2 family protein [Enterococcus faecium D344SRF] gi|291590964|gb|EFF22676.1| Snf2 family protein [Enterococcus faecium E1636] Length = 1064 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 78/214 (36%), Gaps = 22/214 (10%) Query: 5 HKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + + E+ D + + + Q+ + E+ + K++ ++ ++ Sbjct: 844 RQMREEIISMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLEQVKDLL 900 Query: 64 E--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 K N +++ F L LQ + +N G+ + Sbjct: 901 VAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFNTGEKDV 960 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ IE R + G K V V+ +I Sbjct: 961 FLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVVEVWRMI 1014 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++ TI+E + + K + ++ +++ + Sbjct: 1015 SEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 1048 >gi|237805059|ref|YP_002889213.1| putative helicase [Chlamydia trachomatis B/TZ1A828/OT] gi|231273359|emb|CAX10274.1| putative helicase [Chlamydia trachomatis B/TZ1A828/OT] Length = 1163 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 70/197 (35%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 955 LVKQEGFERIHIHVLATLTRLKQICCHPAIFA-KDTPEPGDSAKYDMLMDLLSSLVDSGH 1013 Query: 70 PIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + L +++ + G T ++ Q + + + + G Sbjct: 1014 KTVVFSQYTKMLGIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPGLLVFLVSLKAGG 1073 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1074 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQSRSVSSYKLVTLNTIEEKI 1127 Query: 181 LQRLRTKSTIQDLLLNA 197 L K + ++++ Sbjct: 1128 LSLQNRKKGLVKKVIDS 1144 >gi|76789448|ref|YP_328534.1| SWF/SNF family helicase [Chlamydia trachomatis A/HAR-13] gi|76167978|gb|AAX50986.1| SWF/SNF family helicase [Chlamydia trachomatis A/HAR-13] Length = 1163 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 70/197 (35%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 955 LVKQEGFERIHIHVLATLTRLKQICCHPAIFA-KDTPEPGDSAKYDMLMDLLSSLVDSGH 1013 Query: 70 PIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + L +++ + G T ++ Q + + + + G Sbjct: 1014 KTVVFSQYTKMLGIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPGLLVFLVSLKAGG 1073 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1074 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQSRSVSSYKLVTLNTIEEKI 1127 Query: 181 LQRLRTKSTIQDLLLNA 197 L K + ++++ Sbjct: 1128 LSLQNRKKGLVKKVIDS 1144 >gi|295424920|ref|ZP_06817632.1| possible non-specific serine/threonine protein kinase [Lactobacillus amylolyticus DSM 11664] gi|295065359|gb|EFG56255.1| possible non-specific serine/threonine protein kinase [Lactobacillus amylolyticus DSM 11664] Length = 1090 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 82/214 (38%), Gaps = 27/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y ++L L ++ + F + K +L E+ K+ Sbjct: 867 ELYQAQTQKLIAQLNKQDDKDFKKQRFQVLAAITKLRELCCDPHLLYEDYR---GKSAKL 923 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 A +IE + + I++ F S L +++ Q K I+++ Sbjct: 924 AATMELIEDSIADGHKILLFSQFTSMLELIEQKLKQAKIVTFVITGSTPKQKRQELIKQF 983 Query: 105 NE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N+ + + G G+NL ++++ + WW++ E R + G K Sbjct: 984 NKLDHPAIFLISLKAGGTGINLTS-ADVVIHYDPWWNVAA-----ENQATDRAHRIGQKH 1037 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y ++A+ TI+E +++ K + D +L+ Sbjct: 1038 NVQIYKMVAKGTIEEKIVELQERKEKLADEVLSG 1071 >gi|237803138|ref|YP_002888332.1| putative helicase [Chlamydia trachomatis B/Jali20/OT] gi|231274372|emb|CAX11167.1| putative helicase [Chlamydia trachomatis B/Jali20/OT] Length = 1163 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 70/197 (35%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 955 LVKQEGFERIHIHVLATLTRLKQICCHPAIFA-KDTPEPGDSAKYDMLMDLLSSLVDSGH 1013 Query: 70 PIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + L +++ + G T ++ Q + + + + G Sbjct: 1014 KTVVFSQYTKMLGIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPGLLVFLVSLKAGG 1073 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1074 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQSRSVSSYKLVTLNTIEEKI 1127 Query: 181 LQRLRTKSTIQDLLLNA 197 L K + ++++ Sbjct: 1128 LSLQNRKKGLVKKVIDS 1144 >gi|256827746|ref|YP_003151705.1| DNA/RNA helicase, superfamily II, SNF2 family [Cryptobacterium curtum DSM 15641] gi|256583889|gb|ACU95023.1| DNA/RNA helicase, superfamily II, SNF2 family [Cryptobacterium curtum DSM 15641] Length = 1102 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 74/212 (34%), Gaps = 26/212 (12%) Query: 3 QYHKFQ---RELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R+ ++ + QL ++ K+ Sbjct: 881 LYQAHEARLRQSIKSTDDARFSTGKLEVLAEITRLRQLCCDPALVYDDYR---GPASKLD 937 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWN 105 A+ I+E + +V F S L+R+ + +N Sbjct: 938 AIADIVEGSRDAGEKTLVFSQFTSFLSRIAQRLDEMDIAYHTITGATPKQTRVQLVNAFN 997 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 ++P+ + G GLNL G +++V WW+ E R + G KR V Sbjct: 998 SDEVPVFLISLKAGGTGLNLT-GASVVVHADPWWNAAA-----EDQATDRAHRIGQKRDV 1051 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LI +TI+E +++ TK T D ++ A Sbjct: 1052 TVYKLIEHDTIEERIVKLQETKHTFVDQIIGA 1083 >gi|71910102|ref|YP_281652.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS5005] gi|71852884|gb|AAZ50907.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS5005] Length = 1032 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ + IE S + Q+ + + + + K+ +L + Sbjct: 817 QMQDQIRNSSDVDISRQKIE---ILSGITRLRQICDTPSLFMDY----QGKSGKLDSLRI 869 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ + N ++ F L + ++ + +N G Sbjct: 870 LLTQIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSK 929 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NL G + ++ LWW+ ++R + G K V VY Sbjct: 930 DAFLISLKAGGVGINLT-GADTVILIDLWWNPAVEM-----QAISRAYRIGQKENVEVYR 983 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 984 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1015 >gi|311032686|ref|ZP_07710776.1| SWF/SNF family helicase [Bacillus sp. m3-13] Length = 1044 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 74/217 (34%), Gaps = 27/217 (12%) Query: 2 KQYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + + L + + + + Q+ + K Sbjct: 821 KLYAAYLAKLRHDTLKHLNKDTLRKNKIRILAGLTRLRQICCHPSLFVNGYK---GSSAK 877 Query: 56 IKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 + L +IE++ +++ F L ++ + Sbjct: 878 FEMLLQLIEESQRSGRRVLIFSQFTKMLELIGRELAYQGLPYFYLDGQTPSEERVERCER 937 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + G GLNL G + ++ + LWW+ +E R + G + Sbjct: 938 FNSGERDFFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAADRAHRMGQTQ 991 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V L+A+ TI+E + + K + + +++ ++ Sbjct: 992 TVQVIKLVARGTIEEKMNELQDKKRHLIEEIIDPDER 1028 >gi|113955603|ref|YP_731958.1| helicase [Synechococcus sp. CC9311] gi|113882954|gb|ABI47912.1| helicase, Snf2 family protein [Synechococcus sp. CC9311] Length = 1064 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 70/217 (32%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIK 57 Y K + + + K Q+ N +E+ E K++ Sbjct: 832 LYAKTVEDTLDAIARAPRGKRHGQVLGLLTKLKQICNHPALALKEQGASEDFLKRSVKLQ 891 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 LE I+++ ++ F LQ + + + + + Sbjct: 892 RLEEILDEVVEAGDRALLFTQFAEWGKLLQDYLQRRWRSEVPFLSGSTSKSERQAMVDRF 951 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E L + G GLNL + + WW+ +E R + G Sbjct: 952 QEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDRAYRIGQT 1005 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ I +++E + + +R KS + + ++ + + Sbjct: 1006 NRVMVHKFITSGSVEEKIDRMIREKSRLAEDIIGSGE 1042 >gi|15674499|ref|NP_268673.1| putative SNF helicase [Streptococcus pyogenes M1 GAS] gi|13621600|gb|AAK33394.1| putative SNF helicase [Streptococcus pyogenes M1 GAS] Length = 1032 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ + IE S + Q+ + + + + K+ +L + Sbjct: 817 QMQDQIRNSSDVDISRQKIE---ILSGITRLRQICDTPSLFMDY----QGKSGKLDSLRI 869 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ + N ++ F L + ++ + +N G Sbjct: 870 LLTQIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSK 929 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NL G + ++ LWW+ ++R + G K V VY Sbjct: 930 DAFLISLKAGGVGINLT-GADTVILIDLWWNPAVEM-----QAISRAYRIGQKENVEVYR 983 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 984 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1015 >gi|306824889|ref|ZP_07458233.1| Snf2 family protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433100|gb|EFM36072.1| Snf2 family protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 1031 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 77/211 (36%), Gaps = 24/211 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + R+ + + S ++ Q+ + + + K+ +L + Sbjct: 812 QQM-RDRLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDNYQGA---SGKLDSLRDL 867 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP 110 + + +++ F L ++++ P + +N+G+ Sbjct: 868 LLQVADGGHRVLIFSQFKGMLEKIEQELPNLGLTSFKITGSTPAQDRQEMTKIFNQGERD 927 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL G + ++ LWW+ +E + R + G +R V VY L Sbjct: 928 IFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQERKVEVYRL 981 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + TI+E + + K + +L+ + Sbjct: 982 ITRGTIEEKIQELQEQKKHLISQVLDGTESR 1012 >gi|71902946|ref|YP_279749.1| phage-related DNA helicase [Streptococcus pyogenes MGAS6180] gi|71802041|gb|AAX71394.1| phage-related DNA helicase [Streptococcus pyogenes MGAS6180] Length = 1032 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 77/213 (36%), Gaps = 27/213 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK + + D+ + IE S + Q+ + + + + K+ +L Sbjct: 818 MK--DQIRNSSDVDISRQKIE---ILSGITRLRQICDTPSLFMDY----QGKSGKLDSLR 868 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK 108 +++ + N ++ F L + ++ + +N G Sbjct: 869 ILLTQIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGS 928 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + G G+NL G + ++ LWW+ ++R + G K V VY Sbjct: 929 KDAFLISLKAGGVGINLT-GADTVILIDLWWNPAVEM-----QAISRAYRIGQKENVEVY 982 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 983 RLITRGTIEEKILELQESKRNLVTTVLDGNENR 1015 >gi|225867923|ref|YP_002743871.1| helicase [Streptococcus equi subsp. zooepidemicus] gi|225701199|emb|CAW98123.1| putative helicase [Streptococcus equi subsp. zooepidemicus] Length = 1034 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 23/206 (11%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q L + S + Q+ + + + + K+ L ++ Sbjct: 819 RQMQERLSAATDDDIHRSKLEILSGITRLRQICDTPSLFMDY----QGGSGKLDNLRTLL 874 Query: 64 --EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPL 111 K N ++ F LA +++ Q + + +N G Sbjct: 875 LQIKENGHRTLLFSQFKGMLALVKQEMDQLGLSSYTITGSTPANDRQEMTRAFNNGSKDA 934 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ ++R + G + V VY LI Sbjct: 935 FLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQEDNVEVYRLI 988 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ K + +L+ Sbjct: 989 TRGTIEEKMLELQENKRHLITTVLDG 1014 >gi|302874211|ref|YP_003842844.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|307689525|ref|ZP_07631971.1| SNF2-related protein [Clostridium cellulovorans 743B] gi|302577068|gb|ADL51080.1| SNF2-related protein [Clostridium cellulovorans 743B] Length = 1078 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 75/214 (35%), Gaps = 27/214 (12%) Query: 2 KQYHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + + +L E + + Q+ + ++ K Sbjct: 853 KLYFAYVKHIQGELDDEVKEKGFNNSKIKILAALTRLRQICCDPASFLDDYK---GGSGK 909 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQE 103 +AL ++ + +++ F S L K + + E Sbjct: 910 YEALSEVLAEVLAGNHKVLLFSQFTSVLKNIEKLLTKNKITYKYLDGSTKSQERLKIVDE 969 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N + + G GLNL G ++++ F WW+ +E R + G K Sbjct: 970 FNNDDSQVFLISLKAGGTGLNLT-GADVVIHFDPWWNPS-----VENQATDRAHRIGQKN 1023 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V LI++ TI+E + + R K+ + +L+ Sbjct: 1024 TVEVIKLISKGTIEEKIEKLQRKKTEVIKNVLDE 1057 >gi|294619479|ref|ZP_06698922.1| Snf2 family protein [Enterococcus faecium E1679] gi|291594275|gb|EFF25706.1| Snf2 family protein [Enterococcus faecium E1679] Length = 1064 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 838 VYLAYLRQMREEITSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLE 894 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ ++ K N +++ F L LQ + +N Sbjct: 895 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 954 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ IE R + G K V Sbjct: 955 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVV 1008 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +I++ TI+E + + K + ++ +++ + Sbjct: 1009 EVWRMISEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 1048 >gi|310828799|ref|YP_003961156.1| hypothetical protein ELI_3224 [Eubacterium limosum KIST612] gi|308740533|gb|ADO38193.1| hypothetical protein ELI_3224 [Eubacterium limosum KIST612] Length = 573 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 74/224 (33%), Gaps = 31/224 (13%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVY--------YDEEKHWKEVH 52 + Y ++ +L + A + ++ ++ Q+ G V + Sbjct: 349 RAYRDLVKDSIAELDNLPAVTAQHVITQLLRLSQICGGFVKLDTEGYENDPNAGKLIPIS 408 Query: 53 DEKIKALEVIIEK---ANAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDK 96 KIK E ++ ++V F +++ + + Sbjct: 409 KAKIKLFEELLGDLLSVEGKKVVVFARFTAEIKLLREVLEKQLGADGYRMIDGSVPKDVR 468 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I + A + G G+ L + ++S + ++ R Sbjct: 469 GEYVEDFQKNPAIRVFLAQIQTAGLGITLTAADTTV-YYSTDYSYAAYE-----QSRART 522 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K +L+ ++T+DE +L+ L K +I DL ++ +K Sbjct: 523 HRIGQKNNCTYIHLVVKDTVDEKILEALSQKKSIADLCVDNYQK 566 >gi|257885356|ref|ZP_05665009.1| Snf2 family protein [Enterococcus faecium 1,231,501] gi|257821212|gb|EEV48342.1| Snf2 family protein [Enterococcus faecium 1,231,501] Length = 1064 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 838 VYLAYLRQMREEITSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLE 894 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ ++ K N +++ F L LQ + +N Sbjct: 895 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 954 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ IE R + G K V Sbjct: 955 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVV 1008 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +I++ TI+E + + K + ++ +++ + Sbjct: 1009 EVWRMISEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 1048 >gi|69247670|ref|ZP_00604446.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger:DEAD/DEAH box helicase, N-terminal [Enterococcus faecium DO] gi|257882164|ref|ZP_05661817.1| Snf2 family protein [Enterococcus faecium 1,231,502] gi|258614743|ref|ZP_05712513.1| Snf2 family protein [Enterococcus faecium DO] gi|260562387|ref|ZP_05832901.1| Snf2 family protein [Enterococcus faecium C68] gi|293559937|ref|ZP_06676447.1| Snf2 family protein [Enterococcus faecium E1162] gi|294621010|ref|ZP_06700206.1| Snf2 family protein [Enterococcus faecium U0317] gi|314937677|ref|ZP_07845002.1| protein, SNF2 family [Enterococcus faecium TX0133a04] gi|314940927|ref|ZP_07847833.1| protein, SNF2 family [Enterococcus faecium TX0133C] gi|314948052|ref|ZP_07851454.1| protein, SNF2 family [Enterococcus faecium TX0082] gi|314952331|ref|ZP_07855341.1| protein, SNF2 family [Enterococcus faecium TX0133A] gi|314991945|ref|ZP_07857400.1| protein, SNF2 family [Enterococcus faecium TX0133B] gi|314995203|ref|ZP_07860317.1| protein, SNF2 family [Enterococcus faecium TX0133a01] gi|68194742|gb|EAN09222.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger:DEAD/DEAH box helicase, N-terminal [Enterococcus faecium DO] gi|257817822|gb|EEV45150.1| Snf2 family protein [Enterococcus faecium 1,231,502] gi|260073311|gb|EEW61652.1| Snf2 family protein [Enterococcus faecium C68] gi|291599410|gb|EFF30431.1| Snf2 family protein [Enterococcus faecium U0317] gi|291606102|gb|EFF35526.1| Snf2 family protein [Enterococcus faecium E1162] gi|313590612|gb|EFR69457.1| protein, SNF2 family [Enterococcus faecium TX0133a01] gi|313593529|gb|EFR72374.1| protein, SNF2 family [Enterococcus faecium TX0133B] gi|313595546|gb|EFR74391.1| protein, SNF2 family [Enterococcus faecium TX0133A] gi|313600285|gb|EFR79128.1| protein, SNF2 family [Enterococcus faecium TX0133C] gi|313642950|gb|EFS07530.1| protein, SNF2 family [Enterococcus faecium TX0133a04] gi|313645468|gb|EFS10048.1| protein, SNF2 family [Enterococcus faecium TX0082] Length = 1064 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 838 VYLAYLRQMREEITSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLE 894 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ ++ K N +++ F L LQ + +N Sbjct: 895 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 954 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ IE R + G K V Sbjct: 955 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVV 1008 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +I++ TI+E + + K + ++ +++ + Sbjct: 1009 EVWRMISEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 1048 >gi|293568350|ref|ZP_06679673.1| Snf2 family protein [Enterococcus faecium E1071] gi|291588959|gb|EFF20784.1| Snf2 family protein [Enterococcus faecium E1071] Length = 1064 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 838 VYLAYLRQMREEITSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLE 894 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ ++ K N +++ F L LQ + +N Sbjct: 895 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 954 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ IE R + G K V Sbjct: 955 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVV 1008 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +I++ TI+E + + K + ++ +++ + Sbjct: 1009 EVWRMISEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 1048 >gi|42525525|ref|NP_970623.1| Snf2 family protein [Treponema denticola ATCC 35405] gi|41815536|gb|AAS10504.1| Snf2 family protein [Treponema denticola ATCC 35405] Length = 1194 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 23/216 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + G + Q+ N YD+E + + K Sbjct: 968 LAIYENLVETELHKVMGAETKIERQAYVLKLLTALKQVCNHPRAYDKETPIEMKYSGKAA 1027 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEW 104 L ++ + ++ I+ + L L+ K ++ + Sbjct: 1028 VLIELLNEIISSGEKAIIFSQYVGTLDILKNIIQKELGTEPLLLHGQMPASKRKKAVEVF 1087 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL N ++ F LW++ +E R + G + Sbjct: 1088 QTDSAYRIFLISLKAGGTGLNLTA-ANRVIHFDLWYNPA-----VEDQATDRAFRIGQTK 1141 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VFV+ LI T +E + + ++ K I + ++A + Sbjct: 1142 NVFVHRLICSGTFEEKIDEMIQKKREISGMSISAGE 1177 >gi|170693768|ref|ZP_02884925.1| Non-specific serine/threonine protein kinase [Burkholderia graminis C4D1M] gi|170141186|gb|EDT09357.1| Non-specific serine/threonine protein kinase [Burkholderia graminis C4D1M] Length = 1162 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 79/236 (33%), Gaps = 44/236 (18%) Query: 3 QYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYD------------- 43 Y Q + + + + + +K Q+ Sbjct: 909 LYETVRTAMQERVRAAVSAQGLARSHIIVLDALLKLRQVCCDPRLVRTLRTAQNVGEVSE 968 Query: 44 ---------EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR 92 +K K V K+ L ++ + +++ F L+ + +A + Sbjct: 969 GSSTQTARASDKTEKGVRSAKLDLLLSMLPELIDEGRRVLLFSQFTGMLSLIAQALDEAA 1028 Query: 93 TLD--------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +Q + +G++PL + G GLNL + ++ + WW+ Sbjct: 1029 IPYVILTGDTTDRVTPVQRFQQGEVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA- 1086 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 E R + G + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1087 ----ENQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAGLADSILSEDAA 1138 >gi|322391674|ref|ZP_08065142.1| Snf2 family protein [Streptococcus peroris ATCC 700780] gi|321145485|gb|EFX40878.1| Snf2 family protein [Streptococcus peroris ATCC 700780] Length = 1032 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 82/212 (38%), Gaps = 24/212 (11%) Query: 5 HKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q L +L+ + ++ Q+ + + + + K+ +L + Sbjct: 813 QQMQEHLGKVTELE-FQRNRVEILTGLMRLRQICDTPALFM---NDYQGDSGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP 110 + + +++ F L R+++ P + + +N+G+ Sbjct: 869 LNQIGEANHRVLIFSQFRGMLDRIEQELPHIGLTSFKITGSTPSQERQEMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL G + ++ LWW+ +E ++R + G ++AV VY L Sbjct: 929 VFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VESQAISRAHRMGQEQAVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTRGTIEEKIQELQEQKKNLVSEVLDGTESRG 1014 >gi|257880309|ref|ZP_05659962.1| Snf2 family protein [Enterococcus faecium 1,230,933] gi|257890968|ref|ZP_05670621.1| Snf2 family protein [Enterococcus faecium 1,231,410] gi|257894223|ref|ZP_05673876.1| Snf2 family protein [Enterococcus faecium 1,231,408] gi|257814537|gb|EEV43295.1| Snf2 family protein [Enterococcus faecium 1,230,933] gi|257827328|gb|EEV53954.1| Snf2 family protein [Enterococcus faecium 1,231,410] gi|257830602|gb|EEV57209.1| Snf2 family protein [Enterococcus faecium 1,231,408] Length = 1067 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 841 VYLAYLRQMREEITSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLE 897 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ ++ K N +++ F L LQ + +N Sbjct: 898 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 957 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ IE R + G K V Sbjct: 958 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVV 1011 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +I++ TI+E + + K + ++ +++ + Sbjct: 1012 EVWRMISEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 1051 >gi|323126628|gb|ADX23925.1| SWF/SNF family helicase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 1030 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ IE S + Q+ + + + + K+++L Sbjct: 816 QMQDQIRTASDADINRRKIE---ILSGITRLRQICDTPSLFMDY----DGESGKLESLRT 868 Query: 62 II--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ K N ++ F L + ++ + +N G Sbjct: 869 LLLQIKENGHRALIFSQFRGMLDLAKQEMDALGLTAYQMTGSTPANERQEMTRAFNNGSK 928 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL G + +V LWW+ ++R + G + V VY Sbjct: 929 DAFLISLKAGGVGLNLT-GADTVVLIDLWWNPAVEM-----QAISRAHRIGQEDNVEVYR 982 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 983 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1014 >gi|319938677|ref|ZP_08013041.1| Snf2 family protein [Streptococcus anginosus 1_2_62CV] gi|319811727|gb|EFW07993.1| Snf2 family protein [Streptococcus anginosus 1_2_62CV] Length = 1036 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 18/208 (8%) Query: 5 HKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E N S ++ Q+ + + E+ H + E + L I Sbjct: 815 KQMQERVLASTEEELNRSKMEILSGLMRLRQICDTPALFMEDYHGESGKLESLLELLEQI 874 Query: 64 EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + + +++ F L + +N G+ Sbjct: 875 QTGSH-RVLIFSQFRGMLDIIEKELKKMKMEAFKITGSTPAKERQEMTNAFNNGEGDAFL 933 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G + ++ LWW+ +E + R + G +R V VY LI + Sbjct: 934 ISLKAGGVGLNLT-GADTVILVDLWWNPA-----VESQAIGRAHRMGQERNVEVYRLITR 987 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 TI+E + + +K + +L+ + Sbjct: 988 GTIEEKIQELQESKRHLVSTILDGTESR 1015 >gi|148240736|ref|YP_001226123.1| SNF2 family DNA/RNA helicase [Synechococcus sp. WH 7803] gi|147849275|emb|CAK24826.1| Superfamily II DNA/RNA helicases, SNF2 family [Synechococcus sp. WH 7803] Length = 1070 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 71/218 (32%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIK 57 Y K + + + + Q+ N +E+ + K++ Sbjct: 835 LYAKTVEDTLDAIARAPRGKRHGQVLGLLTRLKQICNHPALALKEEVASDDFLQRSVKLQ 894 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 LE I+++ ++ F LQ + + + + + Sbjct: 895 RLEEILDEVIEAGDRALLFTQFAEWGHLLQGYLQRRWRSEVPFLSGSTSKGERQAMVDRF 954 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E L + G GLNL + + WW+ +E R + G Sbjct: 955 QEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDRAYRIGQT 1008 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ I +++E + + +R KS + + ++ + ++ Sbjct: 1009 NRVMVHKFITSGSVEEKIDRMIREKSRLAEDIVGSGEE 1046 >gi|227552615|ref|ZP_03982664.1| Snf2 family helicase [Enterococcus faecium TX1330] gi|227178241|gb|EEI59213.1| Snf2 family helicase [Enterococcus faecium TX1330] Length = 1064 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 838 VYLAYLRQMREEISSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLE 894 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ ++ K N +++ F L LQ + +N Sbjct: 895 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 954 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ IE R + G K V Sbjct: 955 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVV 1008 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +I++ TI+E + + K + ++ +++ + Sbjct: 1009 EVWRMISEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 1048 >gi|330944324|gb|EGH46382.1| SNF2-related:helicase [Pseudomonas syringae pv. pisi str. 1704B] Length = 468 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 83/204 (40%), Gaps = 20/204 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 271 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 330 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 331 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 390 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 391 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 444 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 A+ T++E + + R KS + +L Sbjct: 445 ARGTVEEKIQRLQREKSALASGVL 468 >gi|330469460|ref|YP_004407203.1| non-specific serine/threonine protein kinase [Verrucosispora maris AB-18-032] gi|328812431|gb|AEB46603.1| non-specific serine/threonine protein kinase [Verrucosispora maris AB-18-032] Length = 1040 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 62/214 (28%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ + + Q+ N + K+ LE Sbjct: 810 LYQVVVDDMMARIEASEGIERRGLVLATMTRLKQVCNHPAQLLRDGSALAGRSGKLARLE 869 Query: 61 VIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 I+++ ++ + R G + + Sbjct: 870 EILDEVLAAGEKALLFTQYAEFGGMLRGHLSARFGREVLFLHGGLGKADRDEMVTRFQSD 929 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P L + G GL L N +V WW+ +E R + G +R V Sbjct: 930 DGPALFVLSLKAGGTGLTLTA-ANHVVHVDRWWNPA-----VEDQATDRAFRIGQRRRVQ 983 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V + T++E V + K ++ ++ ++ Sbjct: 984 VRKFVCAGTVEEKVAALIADKRSLAASVVGTGEQ 1017 >gi|293553056|ref|ZP_06673698.1| Snf2 family protein [Enterococcus faecium E1039] gi|291602765|gb|EFF32975.1| Snf2 family protein [Enterococcus faecium E1039] Length = 1064 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 838 VYLAYLRQMREEITSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLE 894 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ ++ K N +++ F L LQ + +N Sbjct: 895 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 954 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ IE R + G K V Sbjct: 955 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVV 1008 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +I++ TI+E + + K + ++ +++ + Sbjct: 1009 EVWRMISEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 1048 >gi|262195025|ref|YP_003266234.1| SNF2-related protein [Haliangium ochraceum DSM 14365] gi|262078372|gb|ACY14341.1| SNF2-related protein [Haliangium ochraceum DSM 14365] Length = 985 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 66/211 (31%), Gaps = 21/211 (9%) Query: 3 QYHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + R++ L + ++ Q A + E + Sbjct: 767 AYDAVRAATQRDVLERLAHGGG-VMEALEALLRLRQAACHPALLPGREADTSAKMEMLVD 825 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTIQEWNEGKIP 110 ++ A +V + L ++ + + + + P Sbjct: 826 ALSVV-AAEGGKALVFSQWTGLLDLIEPHLRAAEISFNRLDGSTRDRGGVVAAFQDESGP 884 Query: 111 -LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ + G GLNL + + WW+ +E R + G R V VY Sbjct: 885 TVMLISLKAGGTGLNLTA-ADHVFLCDPWWNPA-----VEEQAADRAHRIGQDRPVMVYR 938 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 L++++T++E +L K + + + + Sbjct: 939 LVSKDTVEERILALQEQKRALAEAAIGEGAR 969 >gi|257888157|ref|ZP_05667810.1| Snf2 family protein [Enterococcus faecium 1,141,733] gi|257824211|gb|EEV51143.1| Snf2 family protein [Enterococcus faecium 1,141,733] Length = 1067 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 841 VYLAYLRQMREEISSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLE 897 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ ++ K N +++ F L LQ + +N Sbjct: 898 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 957 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ IE R + G K V Sbjct: 958 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVV 1011 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +I++ TI+E + + K + ++ +++ + Sbjct: 1012 EVWRMISEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 1051 >gi|257896952|ref|ZP_05676605.1| Snf2 family protein [Enterococcus faecium Com12] gi|257833517|gb|EEV59938.1| Snf2 family protein [Enterococcus faecium Com12] Length = 1067 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 841 VYLAYLRQMREEISSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLE 897 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ ++ K N +++ F L LQ + +N Sbjct: 898 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 957 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ IE R + G K V Sbjct: 958 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVV 1011 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +I++ TI+E + + K + ++ +++ + Sbjct: 1012 EVWRMISEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 1051 >gi|89894130|ref|YP_517617.1| hypothetical protein DSY1384 [Desulfitobacterium hafniense Y51] gi|89333578|dbj|BAE83173.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 967 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 74/213 (34%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + ++ +L G + + Q+ + + + + K Sbjct: 743 KIYLAYLQQTKSQIAQELATHGFAKSQIQILAALTRLRQICSHPGMFIDNYTGE---SGK 799 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 + + ++E + ++V F S L + + + Sbjct: 800 MLLFQELLEDSLAGGHRVLVFSQFTSMLDIIGEYLHSENIDYFYLSGSTKALERSRMAAS 859 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N G+ + + G GLNL G + ++ F WW+ +E R + G + Sbjct: 860 FNNGEGQVFLISLKAGGTGLNLT-GADTVIHFDPWWNPA-----VEDQATDRAHRIGQQN 913 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +V V L+ Q TI+E V K + D ++ Sbjct: 914 SVQVIKLLTQGTIEEKVNALQAKKKKLIDSVIQ 946 >gi|325696368|gb|EGD38259.1| Snf2 family protein [Streptococcus sanguinis SK160] Length = 1033 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ E K+++L ++ Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDY---EGESGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIESELDKLGMESFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + + Sbjct: 987 TRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|315656771|ref|ZP_07909658.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492726|gb|EFU82330.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 988 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 71/214 (33%), Gaps = 20/214 (9%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV-- 61 Y K+ + N N + + QLA A D + H + Sbjct: 767 YAKYLTAARAQVADANSPRINILTALTRLRQLALSAKLIDPQAHEDGAKVTYLLQTLEGL 826 Query: 62 ----IIEKANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGKI 109 + +V F S LA L+ T + + G++ Sbjct: 827 RDDSNLNPRQRHQALVFSQFTSFLAILRERLDQAGIDYAYLDGTSRDRDRQVARFQNGEV 886 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + + WW+ E V R + G KR V VY Sbjct: 887 DVFLISLKAGGFGLNLTQ-ADYVFLTDPWWNPAA-----EAQAVDRAHRLGQKRFVNVYR 940 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L+A +TI++ VL+ K + +L+ + + Sbjct: 941 LVATDTIEQRVLELQEKKRDLIGAVLSGQENREV 974 >gi|304389525|ref|ZP_07371488.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327335|gb|EFL94570.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 988 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 71/214 (33%), Gaps = 20/214 (9%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV-- 61 Y K+ + N N + + QLA A D + H + Sbjct: 767 YAKYLTAARAQVADANSPRINILTALTRLRQLALSAKLIDPQAHEDGAKVTYLLQTLEGL 826 Query: 62 ----IIEKANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGKI 109 + +V F S LA L+ T + + G++ Sbjct: 827 RDDSNLNPRQRHQALVFSQFTSFLAILRERLDQAGIDYAYLDGTSRDRDRQVARFQNGEV 886 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + + WW+ E V R + G KR V VY Sbjct: 887 DVFLISLKAGGFGLNLTQ-ADYVFLTDPWWNPAA-----EAQAVDRAHRLGQKRFVNVYR 940 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L+A +TI++ VL+ K + +L+ + + Sbjct: 941 LVATDTIEQRVLELQEKKRDLIGAVLSGQENREV 974 >gi|302671400|ref|YP_003831360.1| helicase SNF2 family [Butyrivibrio proteoclasticus B316] gi|302395873|gb|ADL34778.1| helicase SNF2 family [Butyrivibrio proteoclasticus B316] Length = 1034 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 71/212 (33%), Gaps = 26/212 (12%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + + + +N E S+ + QL + K Sbjct: 813 ELYKAHLQRIKLMVDSKNEEDFRRDRIMILSELTRLRQLCCDPGLIYDNYT---GGSAKA 869 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 +I + +++ F S L R + + + Sbjct: 870 DLCLEMIRSAAESGHKVLLFSQFTSMLERLTAILKKEGIKHYLLTGSTQKEDRIRMVDAF 929 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E P+ + G GLNL +I++ + WW++ +E R + G K Sbjct: 930 QEDDTPVFCISLKAGGTGLNLTA-ADIVIHYDHWWNIA-----VENQATDRAHRIGQKNV 983 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY LI QNTI+E ++ K + D LLN Sbjct: 984 VTVYRLIMQNTIEERIILLQNKKKELADQLLN 1015 >gi|298346771|ref|YP_003719458.1| helicase [Mobiluncus curtisii ATCC 43063] gi|298236832|gb|ADI67964.1| helicase [Mobiluncus curtisii ATCC 43063] Length = 988 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 71/214 (33%), Gaps = 20/214 (9%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV-- 61 Y K+ + N N + + QLA A D + H + Sbjct: 767 YAKYLTAARAQVADANSPRINILTALTRLRQLALSAKLIDPQAHEDGAKVTYLLQTLEGL 826 Query: 62 ----IIEKANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGKI 109 + +V F S LA L+ T + + G++ Sbjct: 827 RDDSNLNPRQRHQALVFSQFTSFLAILRERLDQAGIDYAYLDGTSRDRDRQVARFQNGEV 886 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + + WW+ E V R + G KR V VY Sbjct: 887 DVFLISLKAGGFGLNLTQ-ADYVFLTDPWWNPAA-----EAQAVDRAHRLGQKRFVNVYR 940 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L+A +TI++ VL+ K + +L+ + + Sbjct: 941 LVATDTIEQRVLELQEKKRDLIGAVLSGQENREV 974 >gi|270208570|ref|YP_003329341.1| putative helicase [Sinorhizobium meliloti] gi|76880844|gb|ABA56014.1| putative helicase [Sinorhizobium meliloti] Length = 1126 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 26/214 (12%) Query: 3 QYH----KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVY----YDEEKHWKEVH 52 Y + + + + + +K Q ++ + Sbjct: 900 IYESIRLAMHTRVQAAIAEKGLARSHIVILDALLKLRQACCDPRLLKLTDTKKPSSVQAE 959 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQ 102 K+ L ++ + +IV F S L +++ ++ Sbjct: 960 SAKLDRLMELVGELADEGRKVIVFSQFTSMLDLIRRRLDDADIAYALLTGDTVDRGTQVE 1019 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G +P+ + G GLNL + ++ + WW+ +E + R + G Sbjct: 1020 SFQHGTMPVFLISLKAGGVGLNLTA-ADTVILYDPWWNPA-----VEEQAIDRAHRIGQD 1073 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + VFVY L+A +TI+E + K + L + Sbjct: 1074 KPVFVYRLVAADTIEEKMDVLKDKKRALAASLFD 1107 >gi|56808747|ref|ZP_00366465.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Streptococcus pyogenes M49 591] gi|209558846|ref|YP_002285318.1| Putative SNF helicase [Streptococcus pyogenes NZ131] gi|209540047|gb|ACI60623.1| Putative SNF helicase [Streptococcus pyogenes NZ131] Length = 1032 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ + IE S + Q+ + + + + K+ +L + Sbjct: 817 QMQDQIRNSSDVDISRQKIE---ILSGITRLRQICDTPSLFMDY----QGESGKLDSLRI 869 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ + N ++ F L + ++ + +N G Sbjct: 870 LLTQIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSK 929 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NL G + ++ LWW+ ++R + G K V VY Sbjct: 930 DAFLISLKAGGVGINLT-GADTVILIDLWWNPAVEM-----QAISRAYRIGQKENVEVYR 983 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 984 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1015 >gi|301336251|ref|ZP_07224453.1| SNF2 family helicase [Chlamydia muridarum MopnTet14] Length = 1163 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 955 LVKQEGFERIHIHVLATLTRLKQICCHPAIFA-KDTPEPGDSAKYDMLMDLLSSLVDSGH 1013 Query: 70 PIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + L +++ + G T ++ Q + + + + G Sbjct: 1014 KTVVFSQYTKMLGIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPNLLVFLVSLKAGG 1073 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1074 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQNRSVSSYKLVTLNTIEEKI 1127 Query: 181 LQRLRTKSTIQDLLLNA 197 L K + ++N+ Sbjct: 1128 LSLQNRKKGLVKKVINS 1144 >gi|19745454|ref|NP_606590.1| putative SNF helicase [Streptococcus pyogenes MGAS8232] gi|19747568|gb|AAL97089.1| putative SNF helicase [Streptococcus pyogenes MGAS8232] Length = 1031 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 75/212 (35%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ + IE S + Q+ + + + K+ +L + Sbjct: 816 QMQDQIRNSSDVDISRQKIE---ILSGITRLRQICDTPSLFMNY----QGKSGKLDSLRI 868 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ + N ++ F L + ++ + +N G Sbjct: 869 LLTQIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSK 928 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NL G + ++ LWW+ ++R + G K V VY Sbjct: 929 DAFLISLKAGGVGINLT-GADTVILIDLWWNPAVEM-----QAISRAYRIGQKENVEVYR 982 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 983 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1014 >gi|21909786|ref|NP_664054.1| putative SNF helicase [Streptococcus pyogenes MGAS315] gi|28896521|ref|NP_802871.1| SNF helicase [Streptococcus pyogenes SSI-1] gi|21903971|gb|AAM78857.1| putative SNF helicase [Streptococcus pyogenes MGAS315] gi|28811775|dbj|BAC64704.1| putative SNF helicase [Streptococcus pyogenes SSI-1] Length = 1032 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ + IE S + Q+ + + + + K+ +L + Sbjct: 817 QMQDQIRNSSDVDISRQKIE---ILSGITRLRQICDTPSLFMDY----QGESGKLDSLRI 869 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ + N ++ F L + ++ + +N G Sbjct: 870 LLTQIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSK 929 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NL G + ++ LWW+ ++R + G K V VY Sbjct: 930 DAFLISLKAGGVGINLT-GADTVILIDLWWNPAVEM-----QAISRAYRIGQKENVEVYR 983 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 984 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1015 >gi|306827970|ref|ZP_07461237.1| Snf2 family protein [Streptococcus pyogenes ATCC 10782] gi|304429889|gb|EFM32931.1| Snf2 family protein [Streptococcus pyogenes ATCC 10782] Length = 1032 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ + IE S + Q+ + + + + K+ +L + Sbjct: 817 QMQDQIRNSSDVDISRQKIE---ILSGITRLRQICDTPSLFMDY----QGESGKLDSLRI 869 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ + N ++ F L + ++ + +N G Sbjct: 870 LLTQIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSK 929 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NL G + ++ LWW+ ++R + G K V VY Sbjct: 930 DAFLISLKAGGVGINLT-GADTVILIDLWWNPAVEM-----QAISRAYRIGQKENVEVYR 983 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 984 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1015 >gi|50913662|ref|YP_059634.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS10394] gi|50902736|gb|AAT86451.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS10394] Length = 1032 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ + IE S + Q+ + + + + K+ +L + Sbjct: 817 QMQDQIRNSSDVDISRQKIE---ILSGITRLRQICDTPSLFMDY----QGESGKLDSLRI 869 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ + N ++ F L + ++ + +N G Sbjct: 870 LLTQIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSK 929 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NL G + ++ LWW+ ++R + G K V VY Sbjct: 930 DAFLISLKAGGVGINLT-GADTVILIDLWWNPAVEM-----QAISRAYRIGQKENVEVYR 983 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 984 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1015 >gi|325978978|ref|YP_004288694.1| SNF2 family protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178906|emb|CBZ48950.1| SNF2 family protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 1029 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 25/207 (12%) Query: 5 HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q E +I S + Q+ + + + K+ +L + Sbjct: 815 RQMQ-ETIAGASDADINRRKIEILSGITRLRQICDTPSLFMDY----NGESGKLDSLRTL 869 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP 110 + + N ++ F L +K + + + +N G Sbjct: 870 LTQIKENGHRALIFSQFRGMLDIAEKEMEKLGLTSYKITGSTPANARQEMTRAFNNGSKD 929 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ ++R + G K V VY L Sbjct: 930 TFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQKENVEVYRL 983 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + TI+E +L+ +K + +L+ Sbjct: 984 ITRGTIEEKILEMQESKKNLVTTVLDG 1010 >gi|293571575|ref|ZP_06682597.1| Snf2 family protein [Enterococcus faecium E980] gi|291608381|gb|EFF37681.1| Snf2 family protein [Enterococcus faecium E980] Length = 1064 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 838 VYLAYLRQMREEISSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLE 894 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ ++ K N +++ F L LQ + +N Sbjct: 895 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 954 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ IE R + G K V Sbjct: 955 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVV 1008 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +I++ TI+E + + K + ++ +++ + Sbjct: 1009 EVWRMISEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 1048 >gi|195978760|ref|YP_002124004.1| SWF/SNF family helicase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975465|gb|ACG62991.1| SWF/SNF family helicase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 1034 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 23/206 (11%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q L + S + Q+ + + + + K+ L ++ Sbjct: 819 RQMQERLSAATDDDINRSKLEILSGITRLRQICDTPSLFMDY----QGGSGKLDNLRTLL 874 Query: 64 --EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPL 111 K N ++ F LA +++ Q + + +N G Sbjct: 875 LQIKENGHRALLFSQFKGMLALVKQEIDQLGLSSYTITGSTPANDRQEMTRAFNNGSKDA 934 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ ++R + G + V VY LI Sbjct: 935 FLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQEDNVEVYRLI 988 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ K + +L+ Sbjct: 989 TRGTIEEKMLELQENKRHLITTVLDG 1014 >gi|320547398|ref|ZP_08041686.1| Snf2 family protein [Streptococcus equinus ATCC 9812] gi|320447943|gb|EFW88698.1| Snf2 family protein [Streptococcus equinus ATCC 9812] Length = 1030 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 70/207 (33%), Gaps = 25/207 (12%) Query: 5 HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q E +I S + Q+ + + + + KI +L + Sbjct: 815 RQMQ-ETITSASDADINRRKIEILSGITRLRQICDTPALFMDY----DGESGKIDSLRDL 869 Query: 63 IEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + N ++ F DL D + +N G Sbjct: 870 LTQIKENGHRALIFSQFRGMLDIAEKEIEDLGLTSYKITGSTPADARQEMTRAFNNGSKD 929 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ ++R + G K V VY L Sbjct: 930 TFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQKENVEVYRL 983 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + TI+E +L+ +K + +L+ Sbjct: 984 ITRGTIEEKILEMQESKKNLVTTVLDG 1010 >gi|288906011|ref|YP_003431233.1| SWF/SNF family helicase [Streptococcus gallolyticus UCN34] gi|288732737|emb|CBI14311.1| putative SWF/SNF family helicase [Streptococcus gallolyticus UCN34] Length = 1029 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 25/207 (12%) Query: 5 HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q E +I S + Q+ + + + K+ +L + Sbjct: 815 RQMQ-ETIAGASDADINRRKIEILSGITRLRQICDTPSLFMDY----NGESGKLDSLRTL 869 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP 110 + + N ++ F L +K + + + +N G Sbjct: 870 LTQIKENGHRALIFSQFRGMLDIAEKEMEKLGLTSYKITGSTPANARQEMTRAFNNGSKD 929 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ ++R + G K V VY L Sbjct: 930 TFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQKENVEVYRL 983 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + TI+E +L+ +K + +L+ Sbjct: 984 ITRGTIEEKILEMQESKKNLVTTVLDG 1010 >gi|325277313|ref|ZP_08142939.1| non-specific serine/threonine protein kinase [Pseudomonas sp. TJI-51] gi|324097548|gb|EGB95768.1| non-specific serine/threonine protein kinase [Pseudomonas sp. TJI-51] Length = 1105 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 78/208 (37%), Gaps = 19/208 (9%) Query: 6 KFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-KEVHDEKIKALEVI 62 +++ ++ G +K Q+ + + K+ AL + Sbjct: 881 AMDKKVRDEIARNGAARSQIVILDALLKLRQVCCDLRLVKGVESKGNQADKGKLGALLQM 940 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNEGKIPLL 112 +++ + +++ F S LA +++ + + +Q++ +G + Sbjct: 941 LDELLSEGRRVLLFSQFTSMLALIEQELQKRQIRYSLLTGDTRDRRTPVQQFQQGDSEVF 1000 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ F WW+ E R + G + VFV+ LI Sbjct: 1001 LISLKAGGVGLNLTA-ADTVIHFDPWWNPAS-----ENQATDRAYRIGQDKPVFVFKLIT 1054 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKK 200 + T++E + + K+ + LL+ + Sbjct: 1055 RGTVEEKIQALQQEKAALAASLLDGGQA 1082 >gi|139474374|ref|YP_001129090.1| putative helicase [Streptococcus pyogenes str. Manfredo] gi|134272621|emb|CAM30888.1| putative helicase [Streptococcus pyogenes str. Manfredo] Length = 1032 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 76/212 (35%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ + IE S + Q+ + + + + K+ +L + Sbjct: 817 QMQDQIRNSSDVDISRQKIE---ILSGITRLRQICDTPSLFMDY----QGESGKLDSLRI 869 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ + N ++ F L + ++ + +N G Sbjct: 870 LLTQIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSK 929 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NL G + ++ LWW+ ++R + G K V VY Sbjct: 930 DAFLISLKAGGVGINLT-GADTVILIDLWWNPAVEM-----QAISRAYRIGQKENVEVYR 983 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 984 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1015 >gi|325690932|gb|EGD32932.1| Snf2 family protein [Streptococcus sanguinis SK115] Length = 1033 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ E K+++L ++ Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDY---EGESGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIESELDKLGMESFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + + Sbjct: 987 TRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|251781815|ref|YP_002996117.1| SWF/SNF family helicase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390444|dbj|BAH80903.1| SWF/SNF family helicase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 1032 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ IE S + Q+ + + + + K+++L Sbjct: 818 QMQDQIRTASDADINRRKIE---ILSGITRLRQICDTPSLFMDY----DGESGKLESLRT 870 Query: 62 II--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ K N ++ F L + ++ + +N G Sbjct: 871 LLLQIKENGHRALIFSQFRGMLDLAKQEMDALGLTAYQMTGSTPANERQEMTRAFNNGSK 930 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL G + +V LWW+ ++R + G + V VY Sbjct: 931 DAFLISLKAGGVGLNLT-GADTVVLIDLWWNPAVEM-----QAISRAHRIGQEDNVEVYR 984 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 985 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1016 >gi|323350997|ref|ZP_08086654.1| Snf2 family protein [Streptococcus sanguinis VMC66] gi|322122721|gb|EFX94430.1| Snf2 family protein [Streptococcus sanguinis VMC66] Length = 1033 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ E K+++L ++ Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDY---EGESGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIESELDKMGMESFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + + Sbjct: 987 TRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|170720849|ref|YP_001748537.1| non-specific serine/threonine protein kinase [Pseudomonas putida W619] gi|169758852|gb|ACA72168.1| Non-specific serine/threonine protein kinase [Pseudomonas putida W619] Length = 1108 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 75/208 (36%), Gaps = 19/208 (9%) Query: 6 KFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEK-HWKEVHDEKIKALEVI 62 +++ ++ G +K Q+ + + K+ AL + Sbjct: 884 AMDKKVREEIARNGAARSQIVILDALLKLRQVCCDLRLVKGVEIKGNQADKGKLGALLDM 943 Query: 63 IEK--ANAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 +E+ + +++ F S L R + +Q++ +G + Sbjct: 944 LEELLSEGRRVLLFSQFTSMLALIEQELEKRKIRYSLLTGDTRDRRTPVQQFQQGDSEVF 1003 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ F WW+ E R + G + VFV+ LI Sbjct: 1004 LISLKAGGVGLNLTA-ADTVIHFDPWWNPAS-----ENQATDRAYRIGQDKPVFVFKLIT 1057 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKK 200 + T++E + Q + K+ + LL+ + Sbjct: 1058 RGTVEEKIQQLQQEKAALAASLLDGAEA 1085 >gi|94989794|ref|YP_597894.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS10270] gi|94543302|gb|ABF33350.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS10270] Length = 1032 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 75/212 (35%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ + IE S + Q+ + + + K+ +L + Sbjct: 817 QMQDQIRNSSDVDISRQKIE---ILSGITRLRQICDTPSLFMNY----QGKSGKLDSLRI 869 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ + N ++ F L + ++ + +N G Sbjct: 870 LLTQIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSK 929 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NL G + ++ LWW+ ++R + G K V VY Sbjct: 930 DAFLISLKAGGVGINLT-GADTVILIDLWWNPAVEM-----QAISRAYRIGQKENVEVYR 983 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 984 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1015 >gi|330982693|gb|EGH80796.1| SNF2-related:helicase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 280 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 84/206 (40%), Gaps = 20/206 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 52 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 111 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 112 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 171 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ + WW+ E R + G + VFVY +I Sbjct: 172 FLISLKAGGTGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMI 225 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 A+ T++E + + R KS + +L+ Sbjct: 226 ARGTVEEKIQRLQREKSALASGVLDG 251 >gi|327474515|gb|EGF19920.1| Snf2 family protein [Streptococcus sanguinis SK408] Length = 1033 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ E K+++L ++ Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDY---EGESGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIENELDKLGMESFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + + Sbjct: 987 TRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|324991286|gb|EGC23219.1| Snf2 family protein [Streptococcus sanguinis SK353] Length = 1033 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 79/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ + K+++L ++ Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDYDGE---SGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIESELDKLGMESFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + + Sbjct: 987 TRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|255282163|ref|ZP_05346718.1| domain protein, SNF2 family [Bryantella formatexigens DSM 14469] gi|255267111|gb|EET60316.1| domain protein, SNF2 family [Bryantella formatexigens DSM 14469] Length = 454 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 88/214 (41%), Gaps = 21/214 (9%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y++ +R+ + +L+ G I A +K ++ Q G + DE + V KI ALE Sbjct: 245 QLYNQIKRDSFAELEDGGQITAPTVLTKLLRLQQFTGGFIQADEGIKPEFVFKGKINALE 304 Query: 61 VIIEKA---NAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNE 106 I++ +++ F ++ R + + D+ P Sbjct: 305 DILDDYVISAGKKLVIFCRFRPEIDLISDSLKKKKIRFASIYGDIKIEDRGPIVEDFQKN 364 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + A + G G+ L + V++S ++ + Q + RI + G K Sbjct: 365 PETKVFLAQIDTAGLGITLTA-ADTCVYYSENFNYAAYSQSLARI-----HRIGQKNRCT 418 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +L+ +++IDE +L+ L K + +++ ++ Sbjct: 419 YIHLVVEHSIDETILKALARKEDLAKTVVDDWRQ 452 >gi|306832030|ref|ZP_07465185.1| Snf2 family protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425956|gb|EFM29073.1| Snf2 family protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 1026 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 25/207 (12%) Query: 5 HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q E +I S + Q+ + + + K+ +L + Sbjct: 812 RQMQ-ETIAGASDADINRRKIEILSGITRLRQICDTPSLFMDY----NGESGKLDSLRTL 866 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP 110 + + N ++ F L +K + + + +N G Sbjct: 867 LTQIKENGHRALIFSQFRGMLDIAEKEMEKLGLTSYKITGSTPANARQEMTRAFNNGSKD 926 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ ++R + G K V VY L Sbjct: 927 TFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQKENVEVYRL 980 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + TI+E +L+ +K + +L+ Sbjct: 981 ITRGTIEEKILEMQESKKNLVTTVLDG 1007 >gi|288958707|ref|YP_003449048.1| hypothetical protein AZL_018660 [Azospirillum sp. B510] gi|288911015|dbj|BAI72504.1| hypothetical protein AZL_018660 [Azospirillum sp. B510] Length = 1160 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 68/205 (33%), Gaps = 18/205 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKALEVI 62 + L +G +K Q+ K+ AL + Sbjct: 940 ETVRAALAASGRGLGQNTIAVIDALLKLRQVCCDPRLLKSIAALGGKARPSAKLHALTGM 999 Query: 63 IEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNEGKIPLL 112 +++ I++ F + L ++ + + + ++P+ Sbjct: 1000 VKEMVPEGRRILIFSQFTTMLDLIKLELEKAAIPYVELTGRTLDRALPVNRFQNREVPVF 1059 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ + WW+ E R + G + VFVY LIA Sbjct: 1060 LISLKAGGRGLNLTA-ADTVIHYDPWWNPAA-----EDQATDRAYRIGQDKPVFVYKLIA 1113 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 NT++E +L R K ++ + Sbjct: 1114 ANTVEERILDLQRRKGSLSAATIEG 1138 >gi|257899587|ref|ZP_05679240.1| Snf2 family protein [Enterococcus faecium Com15] gi|257837499|gb|EEV62573.1| Snf2 family protein [Enterococcus faecium Com15] Length = 1067 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + R++ ++ + EAF + + Q+ + E+ + K++ Sbjct: 841 VYLAYLRQMREEISSMDSEAFKKNRIGILAGLTRLRQICCDPRLFIEDY---QGGSGKLE 897 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ ++ K N +++ F L LQ + +N Sbjct: 898 QVKDLLVAAKENKRRVLLFSQFTGMLTILQEELAELGISTFYLRGSTKPQDRLSMVDAFN 957 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + LWW+ IE R + G K V Sbjct: 958 AGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----IEEQAAGRAHRIGQKNVV 1011 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V+ +I++ TI+E + + K + ++ +++ + Sbjct: 1012 EVWRMISEGTIEERMDSLQQEKRELFQKVIQGNEEQLTKL 1051 >gi|87123478|ref|ZP_01079329.1| SNF2 related domain:DEAD/DEAH box helicase [Synechococcus sp. RS9917] gi|86169198|gb|EAQ70454.1| SNF2 related domain:DEAD/DEAH box helicase [Synechococcus sp. RS9917] Length = 1065 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEE---KHWKEVHDEKIK 57 Y K + + + K Q+ N +E K++ Sbjct: 830 LYAKTVEDTLDAIARAPRGQRHGQVLGLLTKLKQICNHPALALKEEAAGDEFLQRSMKLQ 889 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 LE I+E+ ++ F LQ + + + + + Sbjct: 890 RLEEILEEVIDAGDRALLFTQFAEWGHLLQGYLQRRWRSEVPFLNGSTSKSERQAMVDRF 949 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E L + G GLNL + + WW+ +E R + G Sbjct: 950 QEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDRAYRIGQT 1003 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ I +++E + + +R KS + + ++ + + Sbjct: 1004 NRVMVHKFITSGSVEEKIDRMIREKSRLAEDIIGSGE 1040 >gi|125718601|ref|YP_001035734.1| Snf2 family protein, putative [Streptococcus sanguinis SK36] gi|125498518|gb|ABN45184.1| Snf2 family protein, putative [Streptococcus sanguinis SK36] Length = 1033 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ E K+++L ++ Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDY---EGESGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIESELDKMSMESFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + + Sbjct: 987 TRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|324993643|gb|EGC25562.1| Snf2 family protein [Streptococcus sanguinis SK405] gi|324995045|gb|EGC26958.1| Snf2 family protein [Streptococcus sanguinis SK678] gi|327462912|gb|EGF09233.1| Snf2 family protein [Streptococcus sanguinis SK1] Length = 1033 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ E K+++L ++ Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDY---EGESGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIESELDKMGMESFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + + Sbjct: 987 TRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|308178567|ref|YP_003917973.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] gi|307746030|emb|CBT77002.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] Length = 1071 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 74/212 (34%), Gaps = 26/212 (12%) Query: 2 KQYHK----FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + ++E+ + + F QLA E K++ Sbjct: 850 KAYDRRFQRVRQEVLGLVDDVDSNRFKILQSLTLLRQLALDPSLVGEGDA----PSAKLE 905 Query: 58 ALEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWN 105 L ++ + I+V F +L + K I ++ Sbjct: 906 MLRELMADAVSEGHKILVFSQFTGFLQKARQVAEELGIDHGYLDGATSGVKRKELIDGFS 965 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + P+ F S G G+NL + + WW+ + E + R + G R V Sbjct: 966 AEQFPVFFISLKSGGFGINLTS-ADYCILLDPWWNPQA-----EAQAIDRAHRIGQTRPV 1019 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +VY L+A++TI+ VL K+ + + +L Sbjct: 1020 YVYRLVAKDTIESKVLALQAKKTQLFNDVLGE 1051 >gi|15605441|ref|NP_220227.1| SWF/SNF family helicase [Chlamydia trachomatis D/UW-3/CX] gi|255311538|ref|ZP_05354108.1| SWF/SNF family helicase [Chlamydia trachomatis 6276] gi|255317839|ref|ZP_05359085.1| SWF/SNF family helicase [Chlamydia trachomatis 6276s] gi|255349101|ref|ZP_05381108.1| SWF/SNF family helicase [Chlamydia trachomatis 70] gi|255503638|ref|ZP_05382028.1| SWF/SNF family helicase [Chlamydia trachomatis 70s] gi|255507317|ref|ZP_05382956.1| SWF/SNF family helicase [Chlamydia trachomatis D(s)2923] gi|3329163|gb|AAC68303.1| SWF/SNF family helicase [Chlamydia trachomatis D/UW-3/CX] gi|289525752|emb|CBJ15233.1| putative helicase [Chlamydia trachomatis Sweden2] gi|296435325|gb|ADH17503.1| SWF/SNF family helicase [Chlamydia trachomatis E/150] gi|296436253|gb|ADH18427.1| SWF/SNF family helicase [Chlamydia trachomatis G/9768] gi|296437182|gb|ADH19352.1| SWF/SNF family helicase [Chlamydia trachomatis G/11222] gi|296438113|gb|ADH20274.1| SWF/SNF family helicase [Chlamydia trachomatis G/11074] gi|296439042|gb|ADH21195.1| SWF/SNF family helicase [Chlamydia trachomatis E/11023] gi|297140614|gb|ADH97372.1| SWF/SNF family helicase [Chlamydia trachomatis G/9301] gi|297748839|gb|ADI51385.1| SWF/SNF family helicase [Chlamydia trachomatis D-EC] gi|297749719|gb|ADI52397.1| SWF/SNF family helicase [Chlamydia trachomatis D-LC] Length = 1163 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 955 LVKQEGFERIHIHVLATLTRLKQICCHPAIFA-KDTPEPGDSAKYDMLMDLLSSLVDSGH 1013 Query: 70 PIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + L +++ + G T ++ Q + + + + G Sbjct: 1014 KTVVFSQYTKMLGIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPGLLVFLVSLKAGG 1073 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1074 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQSRSVSSYKLVTLNTIEEKI 1127 Query: 181 LQRLRTKSTIQDLLLNA 197 L K + ++N+ Sbjct: 1128 LSLQNRKKGLVKKVINS 1144 >gi|166154925|ref|YP_001653180.1| putative helicase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|165930913|emb|CAP06475.1| putative helicase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 1163 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 955 LVKQEGFERIHIHVLATLTRLKQICCHPAIFA-KDTPEPGDSAKYDMLMDLLSSLVDSGH 1013 Query: 70 PIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + L +++ + G T ++ Q + + + + G Sbjct: 1014 KTVVFSQYTKMLGIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPGLLVFLVSLKAGG 1073 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1074 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQSRSVSSYKLVTLNTIEEKI 1127 Query: 181 LQRLRTKSTIQDLLLNA 197 L K + ++N+ Sbjct: 1128 LSLQNRKKGLVKKVINS 1144 >gi|166154050|ref|YP_001654168.1| putative helicase [Chlamydia trachomatis 434/Bu] gi|301335252|ref|ZP_07223496.1| putative helicase [Chlamydia trachomatis L2tet1] gi|165930038|emb|CAP03521.1| putative helicase [Chlamydia trachomatis 434/Bu] Length = 1163 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 955 LVKQEGFERIHIHVLATLTRLKQICCHPAIFA-KDTPEPGDSAKYDMLMDLLSSLVDSGH 1013 Query: 70 PIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + L +++ + G T ++ Q + + + + G Sbjct: 1014 KTVVFSQYTKMLGIIRQDLEAKGIPFVYLDGSTKNRLEIVQQFNEDPGLLVFLVSLKAGG 1073 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1074 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQSRSVSSYKLVTLNTIEEKI 1127 Query: 181 LQRLRTKSTIQDLLLNA 197 L K + ++N+ Sbjct: 1128 LSLQNRKKGLVKKVINS 1144 >gi|311032005|ref|ZP_07710095.1| SNF2 family helicase [Bacillus sp. m3-13] Length = 937 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKA 58 Y + +E ++ G + Q+ + Y +E + K++ Sbjct: 713 IYEQLVKETLDKVEELGGIQRRGLVLKMLGQLKQVCDHPALYLKEETPENLLMRSSKMEK 772 Query: 59 LEVIIEKAN--AAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 L ++E+ ++ + S L + IQE+ Sbjct: 773 LVELVEQIRLRGESCLIFTQYISMGNMIIEALESTLGEKGRFLNGSVVKKNRDQLIQEFQ 832 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G+ +L + G GLNL N ++ + WW+ +E R + G R V Sbjct: 833 DGEFHVLVLSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQSRFV 886 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ IA T++E + + +K + + ++ + Sbjct: 887 HVHKFIATGTLEEKIDAMIESKQALNNQIITS 918 >gi|73540253|ref|YP_294773.1| SNF2-related:helicase, C-terminal [Ralstonia eutropha JMP134] gi|72117666|gb|AAZ59929.1| SNF2-related:Helicase, C-terminal [Ralstonia eutropha JMP134] Length = 988 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 21/188 (11%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNS 79 + ++ ++ + A A E K++ + + AN ++V F Sbjct: 786 RIHVLAQLMRLRRAACDARLVTPEVGQAG---AKVRTFVDLAGELAANGHKVLVFSQFVD 842 Query: 80 DLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 L L++ + + + G+ + + G GLNL Sbjct: 843 FLQLLRQGIEQAGLALQYLDGATPAAERTRRVAAFQAGEGDVFLISLKAGGFGLNLTA-A 901 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ WW+ E + R + G +R V VY LI TI+E +++ + K Sbjct: 902 DYVIIADPWWNPAA-----EDQAMGRAHRIGQQRPVTVYRLITAGTIEERIVELHKDKRA 956 Query: 190 IQDLLLNA 197 + D LL+A Sbjct: 957 LADGLLDA 964 >gi|322386968|ref|ZP_08060592.1| Snf2 family protein [Streptococcus cristatus ATCC 51100] gi|321269250|gb|EFX52186.1| Snf2 family protein [Streptococcus cristatus ATCC 51100] Length = 1037 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 81/210 (38%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + ++ + K+++L ++ Sbjct: 816 KQMQERILHATEEEINRSKIEILSGLMRLRQICDTPKLFMDDYDGE---SGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L +++ Q + + +N+G+ Sbjct: 873 EQIQDGEHRVLIFSQFRGMLDIIEQELNQMGMESFKITGSTPAKERQEMTKAFNQGERSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G N ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GANTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVKVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + TK + +L+ + Sbjct: 987 TRGTIEEKIQELQDTKRNLVSTILDGAESR 1016 >gi|124004680|ref|ZP_01689524.1| Snf2 family helicase [Microscilla marina ATCC 23134] gi|123989803|gb|EAY29332.1| Snf2 family helicase [Microscilla marina ATCC 23134] Length = 960 Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 72/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK------TVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y K + + ++ + + + ++ K QLAN D+ + Sbjct: 739 KAYEKVKSQYRNEILKQIESSGMAKTQFLLLQGLTKLRQLANHPRMIDQGYEESSGKMDD 798 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTIQEWNE 106 I I N ++V F L + + A+ G T ++ Q Sbjct: 799 ILYKLESII-GNGHKVLVFSQFVKHLQLLKNAFEERQWRFAYLDGSTKNRQQQVEQFQTN 857 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +I L + G GLNL + WW+ IE V R + G + VF Sbjct: 858 DEIQLFLISLKAGGVGLNLTA-AEYVFLLDPWWNPA-----IEAQAVDRAHRIGQENTVF 911 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y I + T++E +L K + L+ Sbjct: 912 TYKFITKGTVEEKILALQTNKRRLAQDLI 940 >gi|322373853|ref|ZP_08048388.1| Snf2 family protein [Streptococcus sp. C150] gi|321277225|gb|EFX54295.1| Snf2 family protein [Streptococcus sp. C150] Length = 1031 Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ L E S + Q+ + + + KI +L ++ Sbjct: 815 QQMQQGLILASDQEINRRKVEILSGITRLRQICDTPALFMDYAG----DSGKIDSLRDLL 870 Query: 64 --EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 K + +++ F L + D + +N+G Sbjct: 871 SQIKESDHRVLIFSQFRGMLDITEGLLEELGISSYKLTGSTPSDSRQEMTRAFNQGSRDA 930 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ ++R + G ++ V VY LI Sbjct: 931 FLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQEQNVEVYRLI 984 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E +L+ K + +L+ + Sbjct: 985 TRGTIEEKILELQEGKKNLVTTVLDGNESR 1014 >gi|258510998|ref|YP_003184432.1| SNF2-like protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477724|gb|ACV58043.1| SNF2-related protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 949 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 73/219 (33%), Gaps = 26/219 (11%) Query: 3 QYHKFQRELYCDLQGE---NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ + + ++ Q+ + K+++L Sbjct: 714 MYQALVDRMFAQIARGPSAMARRGAILTTLLRLKQVCDHPALIS-GGRPSVKRSGKLRSL 772 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNE 106 ++ ++ F L G + ++++ Sbjct: 773 LDLLRVVVDGGEAALIFTQFREMGEMLCAAVEDELGFRPVFLHGGMSAKARGEIVEQYQA 832 Query: 107 GK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ P+L + G GLNL N + + WW+ +E R + G R Sbjct: 833 GRMASPVLILSLRAGGVGLNLTR-ANHVFHYDRWWNPA-----VEDQATDRAYRIGQLRG 886 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V V+ +I T++E + + LR K + D +++ + ++ + Sbjct: 887 VEVHKMICVGTLEERIDEMLRAKRALSD-VVSRVSEDWV 924 >gi|94993679|ref|YP_601777.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS10750] gi|94547187|gb|ABF37233.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS10750] Length = 1032 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 75/212 (35%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ + IE S + Q+ + + + K+ +L + Sbjct: 817 QMQDQIRNSSDVDISRQKIE---ILSGITRLRQICDTPSLFMNY----QGKSGKLDSLRI 869 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ + N ++ F L + ++ + +N G Sbjct: 870 LLTQIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGSK 929 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NL G + ++ LWW+ ++R + G K V VY Sbjct: 930 DAFLISLKAGGVGINLT-GADTVILIDLWWNPAVEM-----QAISRAYRIGQKENVEVYR 983 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 984 LITRGTIEEKILELQESKRNLVTTVLDGNESR 1015 >gi|319942577|ref|ZP_08016886.1| hypothetical protein HMPREF9464_02105 [Sutterella wadsworthensis 3_1_45B] gi|319803873|gb|EFW00795.1| hypothetical protein HMPREF9464_02105 [Sutterella wadsworthensis 3_1_45B] Length = 1352 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 68/223 (30%), Gaps = 33/223 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFN------------SASKTVKCLQLANGAVYYDEEKHWKE 50 Y + + + N Q+ N + + Sbjct: 1119 LYQETLDRMLKQIMEVEKSPENNTPAGRMARRGRVLKLITSLKQICNSPSQFLKTPSLTP 1178 Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKD 97 K AL I+ + + +++ + RLQ G + ++ Sbjct: 1179 -DSGKGDALLEILSQCADSDRKVLIFTQYREMGERLQDWIAQALGERPDFLHGGVSAEER 1237 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + + G GLNL + ++ + LWW+ +E R Sbjct: 1238 MKMVDRFQEDRTARSFILSLKAGGTGLNLTA-ASAVIHYDLWWNPA-----VEAQATDRA 1291 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G +R V VY I + +E + L K + D+ + A + Sbjct: 1292 FRIGQRRDVLVYRFITAGSFEERINDMLMQKRDLADMTVAAGE 1334 >gi|15834706|ref|NP_296465.1| SNF2 family helicase [Chlamydia muridarum Nigg] gi|8163131|gb|AAF73530.1| helicase, Snf2 family [Chlamydia muridarum Nigg] Length = 1181 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 973 LVKQEGFERIHIHVLATLTRLKQICCHPAIFA-KDTPEPGDSAKYDMLMDLLGSLVDSGH 1031 Query: 70 PIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + L +++ + G T ++ Q + + + + G Sbjct: 1032 KTVVFSQYTKMLGIIKQDLEAKGVPFVYLDGSTKNRLEIVQQFNEDPSLLVFLVSLKAGG 1091 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1092 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQSRSVSSYKLVTLNTIEEKI 1145 Query: 181 LQRLRTKSTIQDLLLNA 197 L K + ++N+ Sbjct: 1146 LSLQNRKKGLVKKVINS 1162 >gi|94987919|ref|YP_596020.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS9429] gi|94991803|ref|YP_599902.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS2096] gi|94541427|gb|ABF31476.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS9429] gi|94545311|gb|ABF35358.1| SWF/SNF family helicase [Streptococcus pyogenes MGAS2096] Length = 1032 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 77/213 (36%), Gaps = 27/213 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK + + D+ + IE S + Q+ + + + + K+ +L Sbjct: 818 MK--DQIRNSSDVDISRQKIE---ILSGITRLRQICDTPSLFMDY----QGKSGKLDSLR 868 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK 108 +++ + N ++ F L + ++ + +N G Sbjct: 869 ILLTQIKENGHRALIFSQFRGMLDLAKQEMTALGLTSYQMTGSTPANERQEMTRAFNNGS 928 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + G G+NL G + ++ LWW+ ++R + G K V VY Sbjct: 929 KDAFLISLKAGGVGINL-PGADTVILIDLWWNPAVEM-----QAISRAYRIGQKENVEVY 982 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ +K + +L+ + Sbjct: 983 RLITRGTIEEKILELQESKRNLVTTVLDGNESR 1015 >gi|327462003|gb|EGF08332.1| Snf2 family protein [Streptococcus sanguinis SK1057] Length = 1033 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ E K+++L ++ Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDY---EGESGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIESELDKLGMESFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + + Sbjct: 987 TRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|91201478|emb|CAJ74538.1| similar to ATP-dependent RNA helicase (RNA polymerase associated protein) [Candidatus Kuenenia stuttgartiensis] Length = 886 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 72/217 (33%), Gaps = 22/217 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +EL L+ + +K QL N + ++E K L Sbjct: 660 LYQNTVKELSKKLEATEGVQRRGLILASLMKFKQLCNHPDQFLGTGGYEEADSGKFMRLR 719 Query: 61 VII--EKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNE- 106 I +++ F R ++ ++++ Sbjct: 720 EICETIYEKREKVLIFTQFKEITGHLHAFLKTIFGREGLVMHGSVSVGMRKNIVEQFQNR 779 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 IP + + G GLNL N ++ F WW+ +E R + G K+ V Sbjct: 780 EYIPYMVLSLKAGGVGLNLTE-ANHVIHFDRWWNPA-----VENQATDRAFRIGQKKNVI 833 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V+ I + TI+E + LR K+ + ++ + I Sbjct: 834 VHKFITKGTIEEKINDMLREKTKLTTDVIQVTGESMI 870 >gi|290579916|ref|YP_003484308.1| putative SNF helicase [Streptococcus mutans NN2025] gi|254996815|dbj|BAH87416.1| putative SNF helicase [Streptococcus mutans NN2025] Length = 1030 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 25/211 (11%) Query: 5 HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q + I S + Q+ + + K+ +L + Sbjct: 815 RQMQ-DGIRHSSDSEINRQKIEILSGITRLRQICDTPKLFMNYDD----DSGKLASLREL 869 Query: 63 I--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP 110 + K N ++ F L + ++ +N G Sbjct: 870 LLQIKENGHRALIFSQFRDMLDLAEKEIEALGLTSYKMTGSTPANERQEMTHAFNNGSKD 929 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + +V LWW+ ++R + G K V VY + Sbjct: 930 TFLISLKAGGVGLNLT-GADTVVLIDLWWNPAIEM-----QAISRAHRIGQKENVEVYRM 983 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + TI+E +L+ +K + +L+ + Sbjct: 984 ITRGTIEEKILELQESKKNLVTTVLDGNESR 1014 >gi|328946828|gb|EGG40965.1| Snf2 family protein [Streptococcus sanguinis SK1087] Length = 1033 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ E K+++L ++ Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDY---EGESGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIESELDKMGMESFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + + Sbjct: 987 TRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|227832859|ref|YP_002834566.1| DNA/RNA helicase [Corynebacterium aurimucosum ATCC 700975] gi|227453875|gb|ACP32628.1| DNA/RNA helicase [Corynebacterium aurimucosum ATCC 700975] Length = 1064 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 76/219 (34%), Gaps = 27/219 (12%) Query: 3 QYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEK 55 Y + + + + Q+ N ++ + + K Sbjct: 831 LYKALVNDVEQALAKKKKGISRRGLILASLTRIKQICNHPAHFLADGSPVTIKGKHRSGK 890 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQ 102 ++ L II++ ++ ++ + + L F G + ++ ++ Sbjct: 891 VEELMRIIDQAIESSERALIFTQYKAFGDVLQPYLSEQLGCEIPFFHGGVSKNRRDQMVE 950 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+ P++ + G GLNL +I+V WW+ +E R + G Sbjct: 951 EFQAEDGAPVMLLSLKAGGTGLNLTA-ASIVVHMDRWWNPA-----VENQATDRAFRIGQ 1004 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +R V VY +I T++E + L K+ + ++ + Sbjct: 1005 QRNVQVYKMITAGTLEESIQDILDGKTQLAGAVVGEGEG 1043 >gi|327490072|gb|EGF21860.1| Snf2 family protein [Streptococcus sanguinis SK1058] Length = 1033 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ E K+++L ++ Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDY---EGESGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIESELDKMGMESFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + ++L+ + + Sbjct: 987 TRGTIEEKIQELQESKRNLVSIILDGAEAK 1016 >gi|269216031|ref|ZP_06159885.1| domain protein, SNF2 family [Slackia exigua ATCC 700122] gi|269130290|gb|EEZ61368.1| domain protein, SNF2 family [Slackia exigua ATCC 700122] Length = 1078 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYC---DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + + + R + + ++ + Q+A K +A Sbjct: 858 QAHEQLLRTKIAHEGEEGDDGRSKVEILAELTRLRQIALDPSLLY---ADYRGGGAKEQA 914 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNE 106 + I + ++V F S L K + +N Sbjct: 915 IMDTIASCIASGEKVLVFSQFTSYLDIIGAKLSEQGVKHYVITGSTPKKKRLALVDAFNA 974 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P+ + G GLNL G ++++ WW+ R + G R V Sbjct: 975 DDTPVFLISLKAGGTGLNLT-GASVVLHADPWWNAAAQ-----NQATDRAHRMGQTRIVN 1028 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY +IA++TI+E +L+ KS + D ++ + Sbjct: 1029 VYRVIAKDTIEERILKLQDAKSDLADRIVGS 1059 >gi|24380105|ref|NP_722060.1| putative SNF helicase [Streptococcus mutans UA159] gi|24378101|gb|AAN59366.1|AE015001_11 putative SNF helicase [Streptococcus mutans UA159] Length = 1030 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 25/211 (11%) Query: 5 HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q + I S + Q+ + + K+ +L + Sbjct: 815 RQMQ-DGIRHSSDSEINRQKIEILSGITRLRQICDTPKLFMNYDD----DSGKLASLREL 869 Query: 63 I--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP 110 + K N ++ F L + ++ +N G Sbjct: 870 LLQIKENGHRALIFSQFRDMLDLAEKEIEALGLTSYKMTGSTPANERQEMTHAFNNGSKD 929 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + +V LWW+ ++R + G K V VY + Sbjct: 930 TFLISLKAGGVGLNLT-GADTVVLIDLWWNPAIEM-----QAISRAHRIGQKENVEVYRM 983 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + TI+E +L+ +K + +L+ + Sbjct: 984 ITRGTIEEKILELQESKKNLVTTVLDGNESR 1014 >gi|327470402|gb|EGF15858.1| Snf2 family protein [Streptococcus sanguinis SK330] Length = 1033 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ E K+++L ++ Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDY---EGESGKLESLRELL 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIESELDKMGMESFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + + Sbjct: 987 TRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|270284872|ref|ZP_06194266.1| SNF2 family helicase [Chlamydia muridarum Nigg] gi|270288900|ref|ZP_06195202.1| SNF2 family helicase [Chlamydia muridarum Weiss] Length = 1163 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 955 LVKQEGFERIHIHVLATLTRLKQICCHPAIFA-KDTPEPGDSAKYDMLMDLLGSLVDSGH 1013 Query: 70 PIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + L +++ + G T ++ Q + + + + G Sbjct: 1014 KTVVFSQYTKMLGIIKQDLEAKGVPFVYLDGSTKNRLEIVQQFNEDPSLLVFLVSLKAGG 1073 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1074 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQSRSVSSYKLVTLNTIEEKI 1127 Query: 181 LQRLRTKSTIQDLLLNA 197 L K + ++N+ Sbjct: 1128 LSLQNRKKGLVKKVINS 1144 >gi|260905640|ref|ZP_05913962.1| DNA/RNA helicase, superfamily II, SNF2 family protein [Brevibacterium linens BL2] Length = 1012 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 69/209 (33%), Gaps = 23/209 (11%) Query: 2 KQYHKF---QRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + +R+ + LA D + VH K+ Sbjct: 781 KLYDRVLQKERKKILGFIDSEYDKQRFIVFRSLTLLRMLALDPRIVD--GEHEGVHSSKL 838 Query: 57 KALEVIIEKA--NAAPIIVAYHFN-------SDLARLQKAFPQGRTLDK-DPCTIQEWNE 106 AL +E IV F DL R + + + E+ Sbjct: 839 AALMERLEDVVAEGHRSIVFSQFTSFLDKVAEDLDRRGVPYVVLDGSTRNRGQVVDEFRS 898 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P+ + G GLNL + + WW+ E + R + G + V Sbjct: 899 GAAPVFLISLKAGGFGLNLTE-ADYVFLMDPWWNPAT-----ENQAIDRAHRIGQTKNVM 952 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY +A+ TI+E VL + K+ + D L+ Sbjct: 953 VYRYVAEGTIEEKVLALQKKKAELFDSLM 981 >gi|228476452|ref|ZP_04061142.1| ATP-dependent RNA helicase [Streptococcus salivarius SK126] gi|228251873|gb|EEK10919.1| ATP-dependent RNA helicase [Streptococcus salivarius SK126] Length = 1031 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 23/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ L E S + Q+ + + + K+ +L ++ Sbjct: 815 QQMQQGLISASDQEINRRKVEILSGITRLRQICDTPALFMDYAG----DSGKLDSLRELL 870 Query: 64 --EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 K + +++ F L + D + +N+G Sbjct: 871 SQIKESDHRVLIFSQFRGMLDITEGLLQELGISSYKLTGSTPSDSRQEMTRAFNQGSRDA 930 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ ++R + G ++ V VY LI Sbjct: 931 FLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQEQNVEVYRLI 984 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E +L+ K + +L+ + Sbjct: 985 TRGTIEEKILELQEGKKNLVTTVLDGNESR 1014 >gi|226355788|ref|YP_002785528.1| DNA helicase, SNF2/RAD54 protein family [Deinococcus deserti VCD115] gi|226317778|gb|ACO45774.1| putative DNA helicase, SNF2/RAD54 protein family [Deinococcus deserti VCD115] Length = 1132 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 76/219 (34%), Gaps = 22/219 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + +L+ + A +K Q E + K Sbjct: 889 LYETVRVTMESRVREELRARGLNRSTIAILDALLKLRQAVTDPRLVKLEAARNVQGNAKF 948 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNE 106 + L+ + + +++ F + L+ L++ + T I + Sbjct: 949 EWLQGNLPQMLEEGRRVLIFSGFATLLSHLEQWLREEGTPYSMITGQTQDRQTQIDRFQN 1008 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL + ++ + WW+ E R + G + VF Sbjct: 1009 GETHVFLITLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----EDQATDRAYRIGQDKPVF 1062 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VY LIA +++E +L K+++ +L+ E + Sbjct: 1063 VYKLIAAGSVEERILDLQSRKASLARGILDGGLSEATQL 1101 >gi|238492801|ref|XP_002377637.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus flavus NRRL3357] gi|220696131|gb|EED52473.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus flavus NRRL3357] Length = 1076 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 66/222 (29%), Gaps = 32/222 (14%) Query: 6 KFQRELYCDLQGENIEAF------NSASKTVKCLQLANGA------VYYDEEKHWKEVHD 53 K QR+ Y G ++ N + + + Sbjct: 573 KLQRQAYKSFLGSEEMQSILRGRRQVLYGVDILRKICNHPDLQSHKLTSHKAGYGNPDKS 632 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKDPC 99 K++ ++ ++ K ++ L ++ + Sbjct: 633 GKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQSM 692 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N + + G G+NL G + ++ + W+ + R + Sbjct: 693 VDEFNNNPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAWRL 746 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 747 GQKRDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 788 >gi|182414357|ref|YP_001819423.1| non-specific serine/threonine protein kinase [Opitutus terrae PB90-1] gi|177841571|gb|ACB75823.1| Non-specific serine/threonine protein kinase [Opitutus terrae PB90-1] Length = 922 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 67/211 (31%), Gaps = 25/211 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS-----ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 +Y + E L + A + + Q K KI Sbjct: 681 EYARICTEGLQRLGDDVGAAMREKSFGFLALLTRLRQTCCDPDMLPWLKSPLA-DSGKIA 739 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEW 104 L + + ++ +++ F L R++ G TLD+ Q Sbjct: 740 LLMEKLAEVVSSGHKVVIFSQFVMFLDRVRAALNERFPELPHFELTGMTLDRLKPVQQFQ 799 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N ++ + G G+ L + + WW+ +E V R + G Sbjct: 800 NAPGAAVMLVSLKAAGTGITLHA-ADYVFLLDPWWNPA-----VEAQAVDRVHRIGQTNT 853 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VFVY ++ TI+E + K + + L+ Sbjct: 854 VFVYRMVTAGTIEERIQALKEEKRDLFEKLV 884 >gi|306829829|ref|ZP_07463016.1| Snf2 family protein [Streptococcus mitis ATCC 6249] gi|304427840|gb|EFM30933.1| Snf2 family protein [Streptococcus mitis ATCC 6249] Length = 1031 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 72/211 (34%), Gaps = 24/211 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + RE + + S ++ Q+ + + ++ K+ +L + Sbjct: 812 QQM-RERLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDDYQGA---SGKLDSLRDL 867 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + +N+G+ Sbjct: 868 LLQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAQDRQEMTKAFNQGERD 927 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G ++ V VY L Sbjct: 928 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEQKVEVYRL 981 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + TI+E + + K + +L+ + Sbjct: 982 ITKGTIEEKIQELQEQKKHLVSQVLDGTESR 1012 >gi|262282141|ref|ZP_06059910.1| Snf2 family protein [Streptococcus sp. 2_1_36FAA] gi|262262595|gb|EEY81292.1| Snf2 family protein [Streptococcus sp. 2_1_36FAA] Length = 1032 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + E N + S ++ Q+ + + +E + K+ +L ++ Sbjct: 815 QQMQERMRSATDEELNRDKIEILSGLMRLRQICDTPALFLDEY---QGDSGKLDSLRELL 871 Query: 64 EKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPL 111 E+ + +++ F L +++ +N+G+ Sbjct: 872 EQIHSSNHRVLIFSQFRGMLDLIEQELQSLEMESFKITGSTPAKDRQEMTTAFNDGQKDA 931 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLN+ G + ++ LWW+ +E + R + G +R V VY LI Sbjct: 932 FLISLKAGGVGLNVT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQERNVEVYRLI 985 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + Sbjct: 986 TRGTIEEKIQELQESKKNLISTILDGTESR 1015 >gi|187735422|ref|YP_001877534.1| Non-specific serine/threonine protein kinase [Akkermansia muciniphila ATCC BAA-835] gi|187425474|gb|ACD04753.1| Non-specific serine/threonine protein kinase [Akkermansia muciniphila ATCC BAA-835] Length = 895 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 22/217 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y L+ L + A + Q+ N + + K + L+ Sbjct: 668 LYQAQIDMLHAVLDEPDPAARLMLILPILARLKQICNHPAQFQGTDDYAPERSGKFRRLQ 727 Query: 61 VIIEKAN--AAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWN-E 106 + I+ F S + R G + + + + E Sbjct: 728 ELCASIAARQEKTILFTQFRSIIPHLHDLLSGVFGRSGLTLHGGTPIPERQNIVTAFQKE 787 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P + G GL L + ++ WW+ +E R + G R V Sbjct: 788 SGPPFCILSLKAAGTGLTLTQ-ASHVIHVDRWWNPA-----VENQATDRAYRIGQHRNVL 841 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V+ LI + TI++ + L+ K + D L + ++ + Sbjct: 842 VHRLICRGTIEDRIDAMLKDKRRMADDLFSGGPEQWL 878 >gi|322375571|ref|ZP_08050083.1| Snf2 family protein [Streptococcus sp. C300] gi|321279279|gb|EFX56320.1| Snf2 family protein [Streptococcus sp. C300] Length = 1031 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 24/211 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + R+ + + S ++ Q+ + + ++ K+ +L + Sbjct: 812 QQM-RDRLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDDYQGA---SGKLDSLRDL 867 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + +N+G+ Sbjct: 868 LLQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAHDRQEMTKAFNQGERD 927 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G ++ V VY L Sbjct: 928 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEQKVEVYRL 981 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + TI+E + + K + +L+ + Sbjct: 982 ITKGTIEEKIQELQEQKKHLVSQVLDGTESR 1012 >gi|229817614|ref|ZP_04447896.1| hypothetical protein BIFANG_02882 [Bifidobacterium angulatum DSM 20098] gi|229785403|gb|EEP21517.1| hypothetical protein BIFANG_02882 [Bifidobacterium angulatum DSM 20098] Length = 1229 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 74/213 (34%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L + ++ ++ E+ + K+ Sbjct: 1007 KLYAAHEQRLRASLNSVEDADFDTNRIRILAELTLLREICCAPKLVYEDANGA---SAKL 1063 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEW 104 A++ ++ ++V F S L + F K + ++ Sbjct: 1064 DAIDDLVASCMDAGKKVLVFSQFTSFLDLIGDRFTAHGVPFYTITGETPKRKRVDLVNQF 1123 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +P+ + GLNL G ++++ WW+ R + G + Sbjct: 1124 NMDDVPVFLISLKAGNTGLNLT-GASVVIHADPWWNAAAQS-----QATDRAHRIGQTQD 1177 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++AQ+TI+E +L+ + KS + + Sbjct: 1178 VNVYQIVAQHTIEERILRLQKEKSALARQFTDG 1210 >gi|225164937|ref|ZP_03727151.1| Non-specific serine/threonine protein kinase [Opitutaceae bacterium TAV2] gi|224800459|gb|EEG18841.1| Non-specific serine/threonine protein kinase [Opitutaceae bacterium TAV2] Length = 940 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 70/217 (32%), Gaps = 24/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 +Y + E L + A + + Q+ K + KI Sbjct: 703 EYARICAEGLQRLGDDVSAAIREKSFGLLALLTRLRQVCCDPDMLPWIKDARLADSGKIS 762 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEW 104 L + + N +++ F L R++ + G TLD+ Sbjct: 763 LLIERLAEVIANGHKVVIFSQFVMLLNRVRDALAHSFPDLPRYELTGMTLDRLKPVQGFQ 822 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + + G G+ L + + WW+ +E V R + G Sbjct: 823 NADGAAAMLVSLKAAGTGITLHS-ADYVFLLDPWWNPA-----VEAQAVDRVHRIGQTST 876 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VFVY ++ TI+E + +K + D L+ L + Sbjct: 877 VFVYRMVTAGTIEERIEALKASKRDLFDKLIGGLGGD 913 >gi|330504452|ref|YP_004381321.1| non-specific serine/threonine protein kinase [Pseudomonas mendocina NK-01] gi|328918738|gb|AEB59569.1| non-specific serine/threonine protein kinase [Pseudomonas mendocina NK-01] Length = 876 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 76/205 (37%), Gaps = 19/205 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHW-KEVHDEKIKALEVI 62 +++ ++ + + + ++ Q E+ K+ AL + Sbjct: 657 AMDQKVRDEIARQGLARSHIVILEALLRLRQSCCDLRLLGEDGGQLTAADSGKLSALLDM 716 Query: 63 IEK--ANAAPIIVAYHFNSDLA--------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 +++ +++ F S LA R + ++ + G+ P+ Sbjct: 717 LQELVDEGRRVLLFSQFTSMLALIEAELQARKIAYAKLTGSTQDRRTPVERFQAGEFPVF 776 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ F WW+ E R + G + VFVY LIA Sbjct: 777 LISLKAGGSGLNLTA-ADTVIHFDPWWNPAA-----EAQASDRAYRIGQDKPVFVYKLIA 830 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + +++E + + K+++ +L+ Sbjct: 831 RGSVEEKIQLLQQAKASLARGVLDG 855 >gi|307708395|ref|ZP_07644861.1| Snf2 family protein [Streptococcus mitis NCTC 12261] gi|307615494|gb|EFN94701.1| Snf2 family protein [Streptococcus mitis NCTC 12261] Length = 804 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 72/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + R+ + + S ++ Q+ + + E+ K+ +L + Sbjct: 585 QQM-RDRLAQVSDQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 640 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 641 LLQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 700 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 701 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQEETVEVYRL 754 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 755 VTRGTIEEKIQELQEQKKHLVSQVLDGTESRG 786 >gi|149919942|ref|ZP_01908417.1| SNF2/helicase domain protein [Plesiocystis pacifica SIR-1] gi|149819215|gb|EDM78649.1| SNF2/helicase domain protein [Plesiocystis pacifica SIR-1] Length = 1056 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 65/217 (29%), Gaps = 27/217 (12%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------- 51 + Y + +E + ++ Q A E Sbjct: 829 RTYDAVRAATQEQVVEQLSSGNNVLQVLEALLRLRQAACHRALLPGGSGRIEKDGGDPNA 888 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTI 101 K++ L + + +V + + L ++ + + Sbjct: 889 PSSKLQLLLDTLVQVVDTGHKALVFSQWTTLLDLVEPALKDAGLDFCRLDGSTRDRGGVV 948 Query: 102 QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + P++ + G GLNL + + WW+ +E R + G Sbjct: 949 ERFQDPAGPPVMIISLKAGGTGLNLTA-ADNVFLLDPWWNPA-----VEDQAADRAHRIG 1002 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ LIA T++E +L K + + + Sbjct: 1003 QDKPVIVHRLIASETVEERILALQDRKRKLAETAVGD 1039 >gi|312891015|ref|ZP_07750539.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] gi|311296482|gb|EFQ73627.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] Length = 945 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 24/212 (11%) Query: 4 YHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + + ++ + +G + + Q+ N + E W + Sbjct: 722 YDQVREQIRSSIFLEIEQEGFDKSKLTIIQGITRLRQVCNSPLLLQHEGFWCPDSVKTEV 781 Query: 58 ALEVIIEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNE- 106 ++ ++ ++V F +L F + + + E Sbjct: 782 LVDELLNNLKGHKVLVFSQFTKMLDLLAKQLEELKLDFFHFDGQTPSKQRMEMVNSFQEE 841 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + GLNL + ++ F WW+ QQ I+R + G + V Sbjct: 842 GNTTNIFLISLMAGNMGLNLTA-ADYVILFDPWWNTAVEQQAIDR-----THRIGQTKKV 895 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F Y +I ++TI+E ++ K ++ D L+ Sbjct: 896 FAYKMICRDTIEEKIINLQEKKKSLSDSLIGG 927 >gi|300313869|ref|YP_003777961.1| superfamily II helicase [Herbaspirillum seropedicae SmR1] gi|300076654|gb|ADJ66053.1| superfamily II helicase protein [Herbaspirillum seropedicae SmR1] Length = 829 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 76/220 (34%), Gaps = 24/220 (10%) Query: 2 KQYHKFQ----RELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + +++ L+ G +K Q+ + + K + K Sbjct: 592 ELYESVRMAADKQVRRALERRGLGGSQVTVMDALLKLRQVCCDPYLLKQGRMPKGLERAK 651 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 I L + A I+V F L I Sbjct: 652 IDWLCDTLPALVAEGRRILVFSQFTGMLKLIAAQLEPLQLPYLMLTGETEPAARADVIAG 711 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + PL+ + G GLNL + +V WW+ +E + R + G +R Sbjct: 712 FQQEQTPLMLVSLKAGGVGLNLTA-ADTVVLVDPWWNPA-----VEEQAIARAHRLGQQR 765 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 VFVY L+ + +I+E +L+ KS + + +L T+ Sbjct: 766 QVFVYKLVIEGSIEERLLELQARKSALAEGMLGRDDATTV 805 >gi|78185742|ref|YP_378176.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9902] gi|78170036|gb|ABB27133.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9902] Length = 1063 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 62/217 (28%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIK 57 Y+K + + + + + Q+ N E K+ Sbjct: 833 LYNKTVEDTLDAIATAPRGQRHGQVLALLTRLKQICNHPALAQREGAVDSEFLGRSAKLM 892 Query: 58 ALEV-------------IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW 104 LE + + ++ G + + Sbjct: 893 RLEEILEEVIEAGDRALLFTQFAEWGHLLQAWMQQRWKSEVPFLHGGTRKSDRQAMVDRF 952 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E L + G GLNL + + WW+ +E R + G Sbjct: 953 QEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHVDRWWNPA-----VENQATDRAYRIGQT 1006 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ + + +++E + Q +R K+ + + ++ + + Sbjct: 1007 NRVMVHKFVTRGSVEEKIDQMIREKARMAEDVIGSGE 1043 >gi|241765480|ref|ZP_04763446.1| Non-specific serine/threonine protein kinase [Acidovorax delafieldii 2AN] gi|241364765|gb|EER59758.1| Non-specific serine/threonine protein kinase [Acidovorax delafieldii 2AN] Length = 940 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 69/217 (31%), Gaps = 28/217 (12%) Query: 2 KQYHKFQREL------YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDE 54 + Y + + QG +K Q+ K + + Sbjct: 675 ELYEAVRTTADKQVRRALERQGFEGSQIAILDALLKLRQVCCDPRLVKGTTKTAQTMERA 734 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQ 102 K++ L ++ ++V F L + ++ Sbjct: 735 KLELLAGLLPTLVDEGRRMLVFSQFTEMLMLVAEQLDTLALPYLTLTGQTPPRQRGAVVR 794 Query: 103 EWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++ P+L + G GLNL + +V WW+ +E R + Sbjct: 795 QFQAQDETSAPILLVSLKAGGLGLNLTA-ADTVVHLDPWWNPA-----VEEQATARAHRI 848 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VFVY L+ + +I+E +L+ K+ + +L Sbjct: 849 GQDQPVFVYKLVVEGSIEERMLELQARKAALAQGVLG 885 >gi|291563034|emb|CBL41850.1| Superfamily II DNA/RNA helicases, SNF2 family [butyrate-producing bacterium SS3/4] Length = 1068 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 65/201 (32%), Gaps = 23/201 (11%) Query: 9 RELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK- 65 +E + + E ++ ++ Q+ + K+ ++ Sbjct: 854 KEQLMEGTDGDYGKERMQILAELMRLRQICCEPSLCFDGYK---GGSAKLDTCMELLLNG 910 Query: 66 -ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 + I++ F S L + + + + Sbjct: 911 TSAGHKILLFSQFTSMLEIIAKRLKKEKIPFYLLTGSTPKRDRVQMASSFQKDDVMVFLI 970 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL ++++ + WW++ R + G + V V+ LI ++ Sbjct: 971 SLKAGGTGLNLTA-ADVVIHYDPWWNVAAQ-----NQATDRAHRIGQENQVSVFKLITKH 1024 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 TI+E +L+ K + D ++ Sbjct: 1025 TIEENILKLQEMKRDLADTVV 1045 >gi|307706009|ref|ZP_07642832.1| bacterial SNF2 helicase associated family protein [Streptococcus mitis SK564] gi|307620428|gb|EFN99541.1| bacterial SNF2 helicase associated family protein [Streptococcus mitis SK564] Length = 1032 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 73/212 (34%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + R+ + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQM-RDRLAQVSDQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKVEQELPDLGMTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E ++R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAISRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|270292306|ref|ZP_06198517.1| Snf2 family protein [Streptococcus sp. M143] gi|270278285|gb|EFA24131.1| Snf2 family protein [Streptococcus sp. M143] Length = 1031 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 72/211 (34%), Gaps = 24/211 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + RE + + S ++ Q+ + + ++ K+ +L + Sbjct: 812 QQM-RERLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDDYQGA---SGKLDSLRDL 867 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + +N+G+ Sbjct: 868 LLQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAHDRQEMTKAFNQGERD 927 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G ++ V VY L Sbjct: 928 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEQMVEVYRL 981 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + TI+E + + K + +L+ + Sbjct: 982 ITKGTIEEKIQELQEQKKHLVSQVLDGTESR 1012 >gi|331266037|ref|YP_004325667.1| Snf2 family protein, superfamily II DNA/RNA helicases [Streptococcus oralis Uo5] gi|326682709|emb|CBZ00326.1| Snf2 family protein, superfamily II DNA/RNA helicases [Streptococcus oralis Uo5] Length = 1031 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 24/211 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + R+ + + S ++ Q+ + + ++ K+ +L + Sbjct: 812 QQM-RDRLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDDYQGA---SGKLDSLRDL 867 Query: 63 IEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + +N+G+ Sbjct: 868 LLQVAAGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAHDRQEMTKAFNQGERD 927 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G ++ V VY L Sbjct: 928 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEQKVEVYRL 981 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + TI+E + + K + +L+ + Sbjct: 982 ITKGTIEEKIQELQEQKKHLVSQVLDGTESR 1012 >gi|322382215|ref|ZP_08056128.1| ATP-binding SNF2 helicase-like protein/protein kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153796|gb|EFX46164.1| ATP-binding SNF2 helicase-like protein/protein kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 951 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 29/217 (13%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDE--EKHWKEVHDEKIKA 58 Y + ++ L G + K Q+ N + E K+ Sbjct: 717 LYENYIHDMLDRLNQAGGMGRRGIILAALTKLKQICNHPALVLKERPGGPWEQRSGKLDR 776 Query: 59 LEVIIEK--ANAAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPCTIQEWN 105 L ++ + ++ F +L G + I + Sbjct: 777 LVEMVHELRDEGDKCLIFTQFVDTGFLLQHVLEQELGHPVLFLHGGSSKADRDKMIARFQ 836 Query: 106 EGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +P + + G GLNL N + F WW+ +E R + Sbjct: 837 DLTLPEDEQRYVFLLSLKAGGTGLNLTA-ANHVFHFDRWWNPA-----VENQATDRAYRI 890 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R V V+ I T++E + + + K + ++ Sbjct: 891 GQTRNVQVHKFITLGTLEERIDEMIEQKLGLSQQIVG 927 >gi|313898327|ref|ZP_07831864.1| helicase C-terminal domain protein [Clostridium sp. HGF2] gi|312956709|gb|EFR38340.1| helicase C-terminal domain protein [Clostridium sp. HGF2] Length = 377 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 78/217 (35%), Gaps = 22/217 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K ++ ++ K Q+ N Y E+ ++ K++ L+ Sbjct: 150 LYRKLIADMEEKIKESEGMERRGLVLSTITKLKQICNHPDQYLGEESYRIKDSGKLEMLK 209 Query: 61 VII--EKANAAPIIVAYHFNSDL-----------ARLQKAFPQGRTLDKDPCTIQ-EWNE 106 I ++V + + + G + K + E Sbjct: 210 EICETIYEKRERVLVFTQYKEIIPYLHATLAKIFHQEGYILHGGTPVKKRSEIVAAFQQE 269 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +P + + G GLNL N ++ F WW+ +E R + G K+ V Sbjct: 270 AYVPYIVLSLKAAGTGLNLTA-ANHVIHFDRWWNPA-----VENQATDRAFRIGQKKNVI 323 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V+ LI++ T++E + + +++K + ++ K+ I Sbjct: 324 VHKLISKGTVEEKIDELIKSKVELSQQVIGDGKETWI 360 >gi|77361926|ref|YP_341500.1| DNA helicase [Pseudoalteromonas haloplanktis TAC125] gi|76876837|emb|CAI89054.1| putative DNA helicase with SNF2 domain [Pseudoalteromonas haloplanktis TAC125] Length = 1048 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 71/203 (34%), Gaps = 22/203 (10%) Query: 6 KFQRELYCDLQGENIEAFNSAS---KTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL--E 60 + E DL E + + +K Q+ + K++ L Sbjct: 834 QALEEKLTDLFSEQGMQKSKLAFLEALLKLRQICCHPKLIEPTTQA---GSAKLEWLSNR 890 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNEGKIPLL 112 + + + +I+ F S L + + + + I E+ G + Sbjct: 891 LPLMLSLGRKVIIFSQFTSALDLIAERLKEININFSLLTGQTRQRDKVIDEFTSGATSVF 950 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ + WW+ +E+ R + G VFVY LI Sbjct: 951 LISLKAGGTGLNLTQ-ADTVIHYDPWWNPA-----VEKQATDRAYRIGQTNPVFVYKLIM 1004 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 N+I+E V + + K + D L Sbjct: 1005 ANSIEEKVFKMQQDKQALVDALF 1027 >gi|320526909|ref|ZP_08028099.1| protein, SNF2 family [Solobacterium moorei F0204] gi|320132877|gb|EFW25417.1| protein, SNF2 family [Solobacterium moorei F0204] Length = 1079 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 26/212 (12%) Query: 3 QYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + L LQ + ++ + QL + + K + Sbjct: 860 LYKARVQRLKLMLQKQSDEEFKENKIAVLAELTRLRQLCCDPHLIYDHYK---GNSAKKE 916 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN 105 I+E I++ F S L + ++ + Sbjct: 917 LCLDIVENAIEEGHKILLFSQFTSMLDTLTQEFDKKGIRYHKLVGSTPQFERARMVESFQ 976 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +P+ + G GLNL +I++ + WW+ +E R + G V Sbjct: 977 TDDVPIFCISLKAGGTGLNLTA-ADIVIHYDPWWNTA-----VENQASDRAHRIGQTNVV 1030 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI ++TI+E ++Q + KS + D +L+ Sbjct: 1031 NVFRLIIKDTIEERIIQLQKEKSNLADRILSG 1062 >gi|281415208|ref|ZP_06246950.1| DNA/RNA helicase, superfamily II, SNF2 family protein [Micrococcus luteus NCTC 2665] Length = 630 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 74/210 (35%), Gaps = 22/210 (10%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R++ L + F LA D+ + V K++ Sbjct: 403 KLYDRVLQRERRKVLGLLGDMDGNRFTIFKSLTLLRMLALAPQIVDD--QYASVPSSKLE 460 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEG 107 + + +IV F S L + + I+ + EG Sbjct: 461 RFLDDLTEVIGEGHRVIVFSQFTSFLRVIAEELDHLEIEHAYLDGSTRGRADVIRGFREG 520 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GL L + + WW+ E V R + G +R V V Sbjct: 521 EAPVFLISLKAGGFGLTLTE-ADYVFLMDPWWNPAA-----EAQAVDRAHRIGQERTVMV 574 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+++ TI+E VL+ K+ + L++ Sbjct: 575 YRLVSEGTIEEKVLELQWRKAELFGALMDE 604 >gi|239918579|ref|YP_002958137.1| DNA/RNA helicase, superfamily II, SNF2 family [Micrococcus luteus NCTC 2665] gi|239839786|gb|ACS31583.1| DNA/RNA helicase, superfamily II, SNF2 family [Micrococcus luteus NCTC 2665] Length = 1143 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 74/210 (35%), Gaps = 22/210 (10%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R++ L + F LA D+ + V K++ Sbjct: 916 KLYDRVLQRERRKVLGLLGDMDGNRFTIFKSLTLLRMLALAPQIVDD--QYASVPSSKLE 973 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEG 107 + + +IV F S L + + I+ + EG Sbjct: 974 RFLDDLTEVIGEGHRVIVFSQFTSFLRVIAEELDHLEIEHAYLDGSTRGRADVIRGFREG 1033 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GL L + + WW+ E V R + G +R V V Sbjct: 1034 EAPVFLISLKAGGFGLTLTE-ADYVFLMDPWWNPAA-----EAQAVDRAHRIGQERTVMV 1087 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+++ TI+E VL+ K+ + L++ Sbjct: 1088 YRLVSEGTIEEKVLELQWRKAELFGALMDE 1117 >gi|167464191|ref|ZP_02329280.1| SWF/SNF family helicase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 948 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 29/217 (13%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDE--EKHWKEVHDEKIKA 58 Y + ++ L G + K Q+ N + E K+ Sbjct: 714 LYENYIHDMLDRLNQAGGMGRRGIILAALTKLKQICNHPALVLKERPGGPWEQRSGKLDR 773 Query: 59 LEVIIEK--ANAAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPCTIQEWN 105 L ++ + ++ F +L G + I + Sbjct: 774 LVEMVHELRDEGDKCLIFTQFVDTGFLLQHVLEQELGHPVLFLHGGSSKADRDKMIARFQ 833 Query: 106 EGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +P + + G GLNL N + F WW+ +E R + Sbjct: 834 DLTLPEDEQRYVFLLSLKAGGTGLNLTA-ANHVFHFDRWWNPA-----VENQATDRAYRI 887 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R V V+ I T++E + + + K + ++ Sbjct: 888 GQTRNVQVHKFITLGTLEERIDEMIEQKLGLSQQIVG 924 >gi|239826817|ref|YP_002949441.1| non-specific serine/threonine protein kinase [Geobacillus sp. WCH70] gi|239807110|gb|ACS24175.1| Non-specific serine/threonine protein kinase [Geobacillus sp. WCH70] Length = 933 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 73/212 (34%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ + N Q+ + Y +E+ + V K+K Sbjct: 702 LYEQLVQDTLERAKDANPFQRRGLILQMLNGVKQICDHPALYLKERTPRRVLERSHKLKK 761 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L ++E+ N ++ + +Q+ ++++ Sbjct: 762 LVELLEQIRANDESCLIFTQYVRMGDMIQQLLADLFDEPVLFLNGSVPKAARDRMVEQFQ 821 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + P+ + G GLNL N ++ F WW+ +E R + G + V Sbjct: 822 KRQAPIFILSLKAGGTGLNLTA-ANHVIHFDRWWNPA-----VENQATDRAYRIGQTKFV 875 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI TI+E + L K + D++ Sbjct: 876 HVHKLITTGTIEEKIDDMLEQKLALADVITEG 907 >gi|327403655|ref|YP_004344493.1| SNF2-like protein [Fluviicola taffensis DSM 16823] gi|327319163|gb|AEA43655.1| SNF2-related protein [Fluviicola taffensis DSM 16823] Length = 1124 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 65/206 (31%), Gaps = 18/206 (8%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +E + + + + K Q+ N +E KI+ L Sbjct: 907 VYKTELKEYLMSEPDFTDGQSSMHVLAGLTKLRQICNSPALINENGVSYGEQSAKIQELM 966 Query: 61 V-IIEKANAAPIIVAYHFNSDLA--------RLQKAFPQGRTLDKDPCTIQEWN-EGKIP 110 I +K I+V F L R K + + I Sbjct: 967 EQIEDKKKHHKILVFSQFVGMLKLVERALEERSIPYSLLTGQTKKRKEVVNAFQENEHIR 1026 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + + WW+ +E + R + G + V Sbjct: 1027 VFLISLKAGGMGLNLTQ-ADYVYLLDPWWNPA-----VENQAIDRAYRIGQDKKVVAVRF 1080 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 I NTI+E +L+ + K + L++ Sbjct: 1081 ITPNTIEEKILELQKRKQELVGDLVH 1106 >gi|222152563|ref|YP_002561738.1| helicase [Streptococcus uberis 0140J] gi|222113374|emb|CAR41006.1| putative helicase [Streptococcus uberis 0140J] Length = 1029 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 72/209 (34%), Gaps = 25/209 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII- 63 + + D+ + IE S + Q+ + + E + K++ L ++ Sbjct: 819 DRIKNASDADINRQKIE---ILSGITRLRQICDTPSLFTEY----DGDSGKLECLRTLLL 871 Query: 64 -EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 K N ++ F L + ++ + +N G Sbjct: 872 QVKENGHRALIFSQFKGMLEIAEKELEEMGLNSYKITGSTPANERQEMTRAFNNGSKDAF 931 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + +V LWW+ ++R + G V VY LI Sbjct: 932 LISLKAGGVGLNLT-GADTVVLIDLWWNPAVEM-----QAISRAHRIGQDDNVEVYRLIT 985 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E +L TK + +L+ + Sbjct: 986 RGTIEEKILALQETKRNLVTTVLDGDESR 1014 >gi|262182653|ref|ZP_06042074.1| DNA/RNA helicase [Corynebacterium aurimucosum ATCC 700975] Length = 1023 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 76/219 (34%), Gaps = 27/219 (12%) Query: 3 QYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEK 55 Y + + + + Q+ N ++ + + K Sbjct: 790 LYKALVNDVEQALAKKKKGISRRGLILASLTRIKQICNHPAHFLADGSPVTIKGKHRSGK 849 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQ 102 ++ L II++ ++ ++ + + L F G + ++ ++ Sbjct: 850 VEELMRIIDQAIESSERALIFTQYKAFGDVLQPYLSEQLGCEIPFFHGGVSKNRRDQMVE 909 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+ P++ + G GLNL +I+V WW+ +E R + G Sbjct: 910 EFQAEDGAPVMLLSLKAGGTGLNLTA-ASIVVHMDRWWNPA-----VENQATDRAFRIGQ 963 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +R V VY +I T++E + L K+ + ++ + Sbjct: 964 QRNVQVYKMITAGTLEESIQDILDGKTQLAGAVVGEGEG 1002 >gi|317126472|ref|YP_004100584.1| SNF2-related protein [Intrasporangium calvum DSM 43043] gi|315590560|gb|ADU49857.1| SNF2-related protein [Intrasporangium calvum DSM 43043] Length = 1147 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 67/209 (32%), Gaps = 21/209 (10%) Query: 3 QYHK-FQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + QRE L + + QLA DE K K++ Sbjct: 926 IYDQHLQRERQRVLGLLADAEGNRVAILASLTRLRQLALDPALVDEAHRGKAT-AAKVEF 984 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGK 108 L + + A +V F L ++ + + P I+ + G Sbjct: 985 LVEQLRELAAEGHRALVFSQFTGFLRVVEGALAAAGLRTAYLDGSTTDRPSVIRGFRHGD 1044 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + G GL L + + WW+ E + R + G + V VY Sbjct: 1045 ATAFLISLKAGGFGLTLTE-ADYVFVLDPWWNPAA-----EAQAIDRAHRIGQDKPVTVY 1098 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L++ TI+E V+ K + +++ Sbjct: 1099 RLVSAGTIEEKVVALQERKRDLFQRVVDE 1127 >gi|312885408|ref|ZP_07745049.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] gi|311302106|gb|EFQ79134.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] Length = 1110 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 20/207 (9%) Query: 3 QYHKFQRELYCDL-----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y +++E + + N K Q+ + + EK + + Sbjct: 888 IYDAYEKEFREYICATSNKELAKSPINVLRGLTKLRQICDSPMLLSGEKLPGDESAKIAT 947 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGK 108 +E I K I+V F S L ++K Q G T ++ N Sbjct: 948 LMEEITGKMANHKILVFSQFVSMLDLIKKELHQRNISFAYLTGSTRNRQKVVEDFQNNSA 1007 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL + + WW+ +E + R + G + + Sbjct: 1008 TRVFLISLKAGGTGLNLTE-ADYVYLVDPWWNPA-----VENQAIDRSHRIGQNKNIVAV 1061 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 LI T++E +++ +K + + L+ Sbjct: 1062 RLICPGTVEEKMMKVQSSKRELVNDLI 1088 >gi|288917855|ref|ZP_06412216.1| SNF2-related protein [Frankia sp. EUN1f] gi|288350783|gb|EFC84999.1| SNF2-related protein [Frankia sp. EUN1f] Length = 1198 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 74/212 (34%), Gaps = 22/212 (10%) Query: 2 KQYH---KFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + +R+ L N F QL+ A D+ + KI Sbjct: 979 RIYQTHLQRERQKILGLIGDLNRNRFTILRSLTALRQLSLHAGLVDD--EHDDTPSAKID 1036 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEG 107 L + +V F L R+++ + ++ + EG Sbjct: 1037 VLLEQLRDVADGGHRALVFSQFTRFLGRVRETLTAAGIEHCYLDGSTRDRAGVLRRFKEG 1096 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + WW+ E V R + G R V V Sbjct: 1097 SAPVFLISLKAGGSGLNLTE-ADYCFLLDPWWNPAT-----EAQAVDRTHRIGQSRNVMV 1150 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y L+A++TI+E V+ K+ + ++++ + Sbjct: 1151 YRLVARDTIEEKVMALKARKAELFSGVMDSGE 1182 >gi|63054463|ref|NP_588472.2| ATP-dependent DNA helicase Snf22 [Schizosaccharomyces pombe 972h-] gi|46397098|sp|O94421|SNF22_SCHPO RecName: Full=SWI/SNF chromatin-remodeling complex subunit snf22; AltName: Full=ATP-dependent helicase snf22; AltName: Full=SWI/SNF complex subunit snf22 gi|42558222|dbj|BAD11104.1| SNF2-family ATP dependent chromatin remodeling factor Snf22 [Schizosaccharomyces pombe] gi|157310533|emb|CAA22498.2| ATP-dependent DNA helicase Snf22 [Schizosaccharomyces pombe] Length = 1680 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 78/225 (34%), Gaps = 32/225 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHD----- 53 +K Y + ++ + GE + + ++ ++ N +++ + + Sbjct: 1122 LKLYQQMKKHGMLFVDGEKGKTGIKGLQNTVMQLKKICNHPFIFEDVERAIDPSGTNVDL 1181 Query: 54 -----EKIKALEVIIEKA--NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDK 96 K + L+ I+ K ++ + + D Sbjct: 1182 LWRAAGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDD 1241 Query: 97 DPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++N+ K + + G GLNLQ + ++ F W+ + + Sbjct: 1242 RCSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 1295 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V + LI + +I+E +L R + K + ++ A K Sbjct: 1296 RAHRIGQTKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAGK 1340 >gi|325853079|ref|ZP_08171228.1| SNF2 family N-terminal domain protein [Prevotella denticola CRIS 18C-A] gi|325484453|gb|EGC87374.1| SNF2 family N-terminal domain protein [Prevotella denticola CRIS 18C-A] Length = 1302 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 84/209 (40%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M Y +RE ++ + ++ ++ + Q+A D ++ K+ A Sbjct: 1083 MAMYEVRRRETEERVRANVGDKMSTLAEITRLRQMACSCSLVD---RKWKLPSSKVLAFI 1139 Query: 61 VIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK 108 + E + +V F S +++A + + ++++ GK Sbjct: 1140 DLAESLDESGNRALVFSQFTSFFEEVKQAMDKAKLSYLYLDGSMPMAMREKLVKDFQTGK 1199 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N ++ WW+ Q R + G K+ V VY Sbjct: 1200 CPFFLISLKAGGLGLNLT-GANYVIHLDPWWNPAIEQ-----QATDRAYRIGQKQNVTVY 1253 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +LI+Q+TI+E +L+ +TK + D LL Sbjct: 1254 HLISQHTIEEKILRLHKTKRNLSDSLLEG 1282 >gi|322387436|ref|ZP_08061046.1| Snf2 family protein [Streptococcus infantis ATCC 700779] gi|321141965|gb|EFX37460.1| Snf2 family protein [Streptococcus infantis ATCC 700779] Length = 1032 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 79/211 (37%), Gaps = 22/211 (10%) Query: 5 HKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q L E + ++ Q+ + + E+ K+ +L ++ Sbjct: 813 QQMQERLGQVTDAEFQRNRVEILTGLMRLRQICDTPALFMEDYK---GDSGKLDSLRDLL 869 Query: 64 EK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPL 111 + +++ F L R++K PQ + + +N+G+ + Sbjct: 870 SQIAEGNHRVLIFSQFRGMLDRIEKELPQLGLTSFKITGSTPSQERQEMTKAFNQGERDV 929 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +AV VY L+ Sbjct: 930 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VESQAIGRAHRMGQDQAVEVYRLV 983 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + TI+E + + K + +L+ + Sbjct: 984 TRGTIEEKIQELQEEKKNLVSEVLDGTESRG 1014 >gi|312890761|ref|ZP_07750292.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] gi|311296754|gb|EFQ73892.1| SNF2-related protein [Mucilaginibacter paludis DSM 18603] Length = 964 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 71/201 (35%), Gaps = 18/201 (8%) Query: 6 KFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 +++ EL L+ +K Q+AN D+ E + + Sbjct: 751 EYRNELLKSLEDGTFAKSQMQVLQGLIKLRQIANHPSMIDDNYEGDSGKFEDVTHTLNNV 810 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIPLLFA 114 +++ F L ++ F G T ++ + + K + Sbjct: 811 LD-GGHKVLIFSQFVKQLTIYRQHFEKEHIPYLYLDGSTQNRGEIVKKFQEDEKTRVFLI 869 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + + WW+ QQ I+R + G + VF+Y I ++ Sbjct: 870 SIKAGGVGLNLTE-ADYVFILDPWWNPAVEQQAIDR-----THRIGQTKNVFIYKFITKD 923 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 +++E +L + K + L+ Sbjct: 924 SVEEKILALQQRKLKLSSALI 944 >gi|212715703|ref|ZP_03323831.1| hypothetical protein BIFCAT_00603 [Bifidobacterium catenulatum DSM 16992] gi|212661070|gb|EEB21645.1| hypothetical protein BIFCAT_00603 [Bifidobacterium catenulatum DSM 16992] Length = 1239 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 26/213 (12%) Query: 2 KQY---HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + R + + ++ ++ + K+ Sbjct: 1017 KLYAAHEQRLRATLTKTKDADFNTKKIRILAEFTLLREICCDPRLVYADAKNA---SAKL 1073 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW 104 A+ ++ ++V F S L + + + E+ Sbjct: 1074 DAICELVSTCMDEGKKVLVFSQFTSFLDLIGTRLAEHGVDFYTITGETPKKRRVELVDEF 1133 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N IP+ + GLNL G +++V WW+ R + G + Sbjct: 1134 NGNDIPVFLISLKAGNTGLNL-VGASVVVHADPWWNAAAQ-----NQATDRAHRIGQTQD 1187 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ KS + + Sbjct: 1188 VNVYQIVAKDTIEERILKLQEKKSELAQQFTDG 1220 >gi|154271055|ref|XP_001536381.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus NAm1] gi|150409604|gb|EDN05048.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus NAm1] Length = 1275 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 70/224 (31%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDE--------EKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 709 KLQRSAYEAFLGSNEMSSILRGRREALYGIDMLRKICNHPDLPEHKVLSKKPSYNYGSAS 768 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDK-DP 98 K++ ++ ++ + ++ L + G T K Sbjct: 769 KSGKMQVVKSLLELWRDTGHKTLLFTQHRIMLDILERFIISMGGFKYQRMDGNTPIKFRQ 828 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N I + G G+NL G + ++ + W+ + R Sbjct: 829 KMVDEFNNNPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAW 882 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 883 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 926 >gi|325687137|gb|EGD29160.1| Snf2 family protein [Streptococcus sanguinis SK72] Length = 1033 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 78/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E S ++ Q+ + + E+ E K+++L + Sbjct: 816 KQMQDRIIHATEDEINRSKIEILSGLMRLRQICDTPKLFMEDY---EGESGKLESLRELF 872 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ + +N+G+ Sbjct: 873 EQIQDGNRRVLIFSQFRGMLDIIENELDKLGMDSFKITGSTPAKERQDMTTAFNDGQRSA 932 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G +R V VY +I Sbjct: 933 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRIGQERNVEVYRMI 986 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + + Sbjct: 987 TRGTIEEKIQELQESKRNLVSTILDGAEAK 1016 >gi|307127728|ref|YP_003879759.1| SWF/SNF family ATP-dependent RNA helicase [Streptococcus pneumoniae 670-6B] gi|306484790|gb|ADM91659.1| SWF/SNF family ATP-dependent RNA helicase [Streptococcus pneumoniae 670-6B] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPSKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|301802243|emb|CBW34994.1| putative SNF-family helicase [Streptococcus pneumoniae INV200] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|301794535|emb|CBW36977.1| putative SNF-family helicase [Streptococcus pneumoniae INV104] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|84619206|emb|CAJ42330.1| SNF2 related domain [Streptomyces steffisburgensis] Length = 618 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 71/211 (33%), Gaps = 23/211 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 ++ Y + + + G IE + Q+ N Y E+ K Sbjct: 386 VRLYREAVDRAFDEGLGGGIERRGRVLALLTSLKQICNHPAQYLREEAAGTGRSGKFDRA 445 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKDPCTIQEWN 105 ++ + + +V + G + DK + ++ Sbjct: 446 AEMLAEIVDDGDRALVFTQYRVMGDLLAGHLSQHLGTGPIPFLHGGLSPDKRDRLVHDFQ 505 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + P+L + G GLNL N ++ + WW+ +E R + G +R Sbjct: 506 ESDDAPPVLLLSLRAAGFGLNLTR-ANHVMHYDRWWNPA-----VEEQATDRAHRIGQQR 559 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + V+ L+ TI++ + Q TK D++ Sbjct: 560 TLNVHALVTGGTIEDHIAQMHETKRGFADVV 590 >gi|149198233|ref|ZP_01875280.1| swf/snf family helicase [Lentisphaera araneosa HTCC2155] gi|149138835|gb|EDM27241.1| swf/snf family helicase [Lentisphaera araneosa HTCC2155] Length = 1308 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 80/209 (38%), Gaps = 24/209 (11%) Query: 3 QYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y+ + L G+ + F + + Q A D++ + K+K Sbjct: 1091 VYNGLRARASDRLGKRGGDRNDKFFILEEITRLRQAACSPSLLDKQFSDQ---SAKLKRF 1147 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEG 107 ++++ +V F S L ++K K P ++++ G Sbjct: 1148 IELVKELKEAGHRALVFSQFTSFLDLVEKALAEEDVDFLRLDGSTPAKKRPQLVKKFQVG 1207 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 K + + G GLNL N ++ WW+ +E R + G ++AV V Sbjct: 1208 KSSVFLISLKAGGFGLNLTA-ANYVIHLDPWWNPA-----VEDQATDRAHRIGQEKAVTV 1261 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI++ TI+E +L+ +K + D +L Sbjct: 1262 YRLISEGTIEEKILKLHESKRELADFMLG 1290 >gi|306834168|ref|ZP_07467288.1| Snf2 family protein [Streptococcus bovis ATCC 700338] gi|304423741|gb|EFM26887.1| Snf2 family protein [Streptococcus bovis ATCC 700338] Length = 1026 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 71/207 (34%), Gaps = 25/207 (12%) Query: 5 HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q E +I S + Q+ + + + K+ +L + Sbjct: 812 RQMQ-ETIAGASDADINRRKIEILSGITRLRQICDTPSLFMDY----NGESGKLDSLRTL 866 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP 110 + + N ++ F L +K + + + +N G Sbjct: 867 LIQVKENGHRALIFSQFRGMLDIAEKEMEELGLTSYKITGSTPANARQEMTRAFNNGSKD 926 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ ++R + G K V VY L Sbjct: 927 TFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQKANVEVYRL 980 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + TI+E +L+ +K + +L+ Sbjct: 981 ITRGTIEEKILEMQESKKNLVTTVLDG 1007 >gi|225857148|ref|YP_002738659.1| Snf2 family protein [Streptococcus pneumoniae P1031] gi|225726227|gb|ACO22079.1| Snf2 family protein [Streptococcus pneumoniae P1031] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 73/212 (34%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F SDL + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELSDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNL-SGADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|15806278|ref|NP_294983.1| SNF2/RAD54 family DNA helicase [Deinococcus radiodurans R1] gi|6459005|gb|AAF10831.1|AE001973_4 DNA helicase, SNF2/RAD54 family [Deinococcus radiodurans R1] Length = 600 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 66/195 (33%), Gaps = 16/195 (8%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN 78 +K Q E + + K+ LE + + +++ F Sbjct: 389 STIAILDALLKLRQAVTDPRLVKLEAAREVQGNAKLDWLETNLPQMVEEGRRVLIFSGFA 448 Query: 79 SDLARLQKAFPQGRTLD--------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 + L L++ + I + G+ + + G GLNL + Sbjct: 449 TLLGHLEEFLKREGIPYSKITGQTKDRQKQIDAFQAGETHVFLITLKAGGVGLNLTA-AD 507 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + WW+ E R + G + VFVY LIA +++E +L K+ + Sbjct: 508 TVIHYDPWWNPAA-----EDQATDRAYRIGQDKPVFVYKLIAAGSVEERILDLQARKAAL 562 Query: 191 QDLLLNALKKETIHV 205 +L+ + + Sbjct: 563 ARGVLDGGLTDATQL 577 >gi|293365804|ref|ZP_06612510.1| Snf2 family protein [Streptococcus oralis ATCC 35037] gi|307703327|ref|ZP_07640271.1| bacterial SNF2 helicase associated family protein [Streptococcus oralis ATCC 35037] gi|291315737|gb|EFE56184.1| Snf2 family protein [Streptococcus oralis ATCC 35037] gi|307623103|gb|EFO02096.1| bacterial SNF2 helicase associated family protein [Streptococcus oralis ATCC 35037] Length = 1031 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 24/211 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + R+ + + S ++ Q+ + + ++ K+ +L + Sbjct: 812 QQM-RDRLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDDYQGA---SGKLDSLRDL 867 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + +N+G+ Sbjct: 868 LLQVADGGHRVLIFSQFKGMLEKIEQELPVLGLTSFKITGSTPAHDRQEMTKAFNQGERD 927 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G ++ V VY L Sbjct: 928 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEQMVEVYRL 981 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + TI+E + + K + +L+ + Sbjct: 982 ITKGTIEEKIQELQEQKKHLVSQVLDGTESR 1012 >gi|115375420|ref|ZP_01462681.1| SWI/SNF family helicase [Stigmatella aurantiaca DW4/3-1] gi|310821127|ref|YP_003953485.1| snf2/helicase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115367547|gb|EAU66521.1| SWI/SNF family helicase [Stigmatella aurantiaca DW4/3-1] gi|309394199|gb|ADO71658.1| SNF2/helicase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 982 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 23/209 (11%) Query: 3 QYHKFQRELYCD---LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + L E + ++ Q A + + K++ L Sbjct: 766 VYDAVMAATRAEVVALLNEGGSVLKALEALLRLRQAACHSALVPGQHATS---SSKVQTL 822 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGK- 108 + + +V + S L ++ T + + Sbjct: 823 VEALGTAVSEGHKALVFSQWTSLLDLIEPGLKGAGIAFERLDGTTADRGAVTTRFQSPEG 882 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P++ + G GLNL + + WW+ +E R + G +R V VY Sbjct: 883 APVMLMSLKAGGTGLNLTA-ADHVFLMDPWWNPA-----VEAQAADRAHRIGQERPVMVY 936 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L++Q T++E +L K I + L+ Sbjct: 937 RLVSQGTVEERILGLQEKKRAIFEAALSE 965 >gi|88809531|ref|ZP_01125039.1| hypothetical protein WH7805_10274 [Synechococcus sp. WH 7805] gi|88786750|gb|EAR17909.1| hypothetical protein WH7805_10274 [Synechococcus sp. WH 7805] Length = 1070 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 68/218 (31%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEE---KHWKEVHDEKIK 57 Y K + + + Q+ N +E K++ Sbjct: 835 LYAKTVENTLDAIARAPRGKRHGQVLGLLTRLKQICNHPALALKEEVAGDDFLQRSVKLQ 894 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 LE I+E+ ++ F LQ + + + + + Sbjct: 895 RLEEILEEVIAAGDRALLFTQFAEWGHLLQGYLQRRWRSEVPFLSGSTSKGERQAMVDRF 954 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E L + G GLNL + + WW+ +E R + G Sbjct: 955 QEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDRAYRIGQT 1008 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ I +++E + + +R KS + + ++ + ++ Sbjct: 1009 NRVMVHKFITSGSVEEKIDRMIREKSRLAEDIVGSGEE 1046 >gi|168488816|ref|ZP_02713015.1| Snf2 family protein [Streptococcus pneumoniae SP195] gi|183572774|gb|EDT93302.1| Snf2 family protein [Streptococcus pneumoniae SP195] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|325091990|gb|EGC45300.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus H88] Length = 1092 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 70/224 (31%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDE--------EKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 530 KLQRSAYEAFLGSNEMSSILRGRREALYGIDMLRKICNHPDLAEHKVLSKKPSYNYGSAS 589 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDK-DP 98 K++ ++ ++ + ++ L + G T K Sbjct: 590 KSGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILERFIISMGGFKYQRMDGNTPIKFRQ 649 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N I + G G+NL G + ++ + W+ + R Sbjct: 650 KMVDEFNNNPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAW 703 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 704 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 747 >gi|15901369|ref|NP_345973.1| Snf2 family protein [Streptococcus pneumoniae TIGR4] gi|111658366|ref|ZP_01409053.1| hypothetical protein SpneT_02000445 [Streptococcus pneumoniae TIGR4] gi|14973013|gb|AAK75613.1| Snf2 family protein [Streptococcus pneumoniae TIGR4] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|327313991|ref|YP_004329428.1| SNF2 family N-terminal domain-containing protein [Prevotella denticola F0289] gi|326946179|gb|AEA22064.1| SNF2 family N-terminal domain protein [Prevotella denticola F0289] Length = 1340 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 84/209 (40%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M Y +RE ++ + ++ ++ + Q+A D ++ K+ A Sbjct: 1121 MAMYEVRRRETEERVRANVGDKMSTLAEITRLRQMACSCSLVD---RKWKLPSSKVLAFI 1177 Query: 61 VIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK 108 + E + +V F S +++A + + ++++ GK Sbjct: 1178 DLAESLDESGNRALVFSQFTSFFEEVKQAMDKAKLSYLYLDGSTPMAMREKLVKDFQTGK 1237 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL G N ++ WW+ Q R + G K+ V VY Sbjct: 1238 CPFFLISLKAGGLGLNLT-GANYVIHLDPWWNPAIEQ-----QATDRAYRIGQKQNVTVY 1291 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +LI+Q+TI+E +L+ +TK + D LL Sbjct: 1292 HLISQHTIEEKILRLHKTKRNLSDSLLEG 1320 >gi|168491585|ref|ZP_02715728.1| Snf2 family protein [Streptococcus pneumoniae CDC0288-04] gi|183574164|gb|EDT94692.1| Snf2 family protein [Streptococcus pneumoniae CDC0288-04] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTEAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|225859280|ref|YP_002740790.1| Snf2 family protein [Streptococcus pneumoniae 70585] gi|225720179|gb|ACO16033.1| Snf2 family protein [Streptococcus pneumoniae 70585] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|148992589|ref|ZP_01822257.1| Snf2 family protein [Streptococcus pneumoniae SP9-BS68] gi|168484940|ref|ZP_02709885.1| Snf2 family protein [Streptococcus pneumoniae CDC1873-00] gi|147928606|gb|EDK79620.1| Snf2 family protein [Streptococcus pneumoniae SP9-BS68] gi|172041922|gb|EDT49968.1| Snf2 family protein [Streptococcus pneumoniae CDC1873-00] gi|332072316|gb|EGI82799.1| helicase conserved C-terminal domain protein [Streptococcus pneumoniae GA17570] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|149003261|ref|ZP_01828157.1| Snf2 family protein [Streptococcus pneumoniae SP14-BS69] gi|237650205|ref|ZP_04524457.1| Snf2 family protein [Streptococcus pneumoniae CCRI 1974] gi|237820912|ref|ZP_04596757.1| Snf2 family protein [Streptococcus pneumoniae CCRI 1974M2] gi|147758721|gb|EDK65718.1| Snf2 family protein [Streptococcus pneumoniae SP14-BS69] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|293375830|ref|ZP_06622099.1| SNF2 family N-terminal domain protein [Turicibacter sanguinis PC909] gi|292645538|gb|EFF63579.1| SNF2 family N-terminal domain protein [Turicibacter sanguinis PC909] Length = 1080 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 75/204 (36%), Gaps = 23/204 (11%) Query: 6 KFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++E++ +++ G + ++ QL Y E + K+ ++ Sbjct: 861 QMKQEMHHEIEEVGVERSRIKILALLMRLRQLCCHPSLYLENYRGE---SAKLNLCMQLV 917 Query: 64 EKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIPL 111 + + +++ F S L L + +++N+ + Sbjct: 918 QDCIASGHKVLIFSQFTSMLEILGRELKAKEIKFLTLTGATKTSDRLALTEQFNQDDTKV 977 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G ++++ + WW++ R + G + V V+ L+ Sbjct: 978 FLISLKAGGTGLNLT-GADVVIHYDPWWNMSAQ-----NQATDRAHRLGQDKTVQVFKLM 1031 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 +NTI+E + K + + ++ Sbjct: 1032 VKNTIEERIQVLQEQKRDLTEAIV 1055 >gi|225861356|ref|YP_002742865.1| Snf2 family protein [Streptococcus pneumoniae Taiwan19F-14] gi|298230251|ref|ZP_06963932.1| Snf2 family protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298503259|ref|YP_003725199.1| Snf2 family helicase [Streptococcus pneumoniae TCH8431/19A] gi|225727638|gb|ACO23489.1| Snf2 family protein [Streptococcus pneumoniae Taiwan19F-14] gi|298238854|gb|ADI69985.1| Snf2 family helicase [Streptococcus pneumoniae TCH8431/19A] gi|327389708|gb|EGE88053.1| helicase conserved C-terminal domain protein [Streptococcus pneumoniae GA04375] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|221232235|ref|YP_002511388.1| putative SNF-family helicase [Streptococcus pneumoniae ATCC 700669] gi|220674696|emb|CAR69269.1| putative SNF-family helicase [Streptococcus pneumoniae ATCC 700669] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|317034915|ref|XP_001400735.2| DNA repair protein Rhp26/Rad26 [Aspergillus niger CBS 513.88] Length = 1214 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 68/222 (30%), Gaps = 32/222 (14%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE------KHWKEVHD 53 + Y F E+ L G ++ N + + + Sbjct: 702 QAYEAFLGSEEMKSILNG----RRQVLFGVDILRKICNHPDLQNHKLMSSTTGYGSGSKS 757 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKDPC 99 K++ ++ ++ K ++ L ++ + Sbjct: 758 GKMQVVKSLLELWKDTGHKTLLFTQHRIMLDILEKFVNSLSGFSYRRMDGTTPIQHRQAM 817 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N+ + + G G+NL G + ++ + W+ + R + Sbjct: 818 VDEFNNDPSLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAWRL 871 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 872 GQKRDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 913 >gi|307706218|ref|ZP_07643035.1| bacterial SNF2 helicase associated family protein [Streptococcus mitis SK321] gi|307618408|gb|EFN97558.1| bacterial SNF2 helicase associated family protein [Streptococcus mitis SK321] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 71/208 (34%), Gaps = 23/208 (11%) Query: 9 RELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK- 65 R+ + + S ++ Q+ + + E+ K+ +L ++ + Sbjct: 816 RDRLAQVSDQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDLLVQV 872 Query: 66 -ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 +++ F L + + +N+G+ Sbjct: 873 ADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLI 932 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ LWW+ +E + R + G + V VY L+ + Sbjct: 933 SLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRLVTKG 986 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 TI+E + + K + +L+ + Sbjct: 987 TIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|168493424|ref|ZP_02717567.1| Snf2 family protein [Streptococcus pneumoniae CDC3059-06] gi|183576378|gb|EDT96906.1| Snf2 family protein [Streptococcus pneumoniae CDC3059-06] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|148988567|ref|ZP_01820000.1| Snf2 family protein [Streptococcus pneumoniae SP6-BS73] gi|147925768|gb|EDK76843.1| Snf2 family protein [Streptococcus pneumoniae SP6-BS73] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|15903418|ref|NP_358968.1| Snf2 family protein [Streptococcus pneumoniae R6] gi|116516877|ref|YP_816813.1| Snf2 family protein [Streptococcus pneumoniae D39] gi|15459024|gb|AAL00179.1| SWF/SNF family ATP-dependent RNA helicase [Streptococcus pneumoniae R6] gi|116077453|gb|ABJ55173.1| Snf2 family protein [Streptococcus pneumoniae D39] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|313623518|gb|EFR93710.1| SNF2 family helicase [Listeria innocua FSL J1-023] Length = 650 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 77/210 (36%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + ++ DL+ N A + + Q+ + E + K+ Sbjct: 423 IYLAYLEKIQADLEESNGNASEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQ 479 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE 106 L I+ + N I++ F LA ++ + +NE Sbjct: 480 LFDTIQTARENGKRILIFSQFTGMLAIIRRKLEEDGQSLFYMDGKTPAKTRLDMVNAFNE 539 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL G + ++ + LWW+ +E R + G KR V Sbjct: 540 GENDIFLISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQ 593 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ +I + TI+E + + K + D L+ Sbjct: 594 VFRMITKGTIEERIFDLQKKKQALVDELIQ 623 >gi|282891309|ref|ZP_06299811.1| hypothetical protein pah_c050o088 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498806|gb|EFB41123.1| hypothetical protein pah_c050o088 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 1166 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 21/209 (10%) Query: 2 KQYHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y + RE L +G + + + + Q+ + +EK + K Sbjct: 945 RSYAQSAREELSQLVSKEGFDKVQIHVLATLTRLKQICCHPAIFAKEKP-EGGDSSKYDM 1003 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWN-EG 107 L +I ++ + L ++ + ++++N + Sbjct: 1004 LMELIPTLIEGKHKTVIFSQYTRMLNIIRDDLSSQGIPFEYLDGSSKNRLNIVKKFNEDE 1063 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 IP+ + G GLNL G + ++ + +WW+ +E R + G K++V Sbjct: 1064 NIPIFLVSLKAGGTGLNL-IGADTVIHYDMWWNPA-----VENQATDRVHRLGQKKSVLS 1117 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y LI TI+E +LQ + K +++ Sbjct: 1118 YKLITLGTIEEKILQLQQQKEGHVKKVVS 1146 >gi|149021792|ref|ZP_01835799.1| Snf2 family protein [Streptococcus pneumoniae SP23-BS72] gi|147930028|gb|EDK81015.1| Snf2 family protein [Streptococcus pneumoniae SP23-BS72] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|332073859|gb|EGI84337.1| helicase conserved C-terminal domain protein [Streptococcus pneumoniae GA41301] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|225555676|gb|EEH03967.1| DNA dependent ATPase [Ajellomyces capsulatus G186AR] Length = 1276 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 70/224 (31%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDE--------EKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 709 KLQRSAYEAFLGSNEMSSILRGRREALYGIDMLRKICNHPDLPEHKVLSKKPSYNYGSAS 768 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDK-DP 98 K++ ++ ++ + ++ L + G T K Sbjct: 769 KSGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILERFIISMGGFKYQRMDGNTPIKFRQ 828 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N I + G G+NL G + ++ + W+ + R Sbjct: 829 KMVDEFNNNPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAW 882 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 883 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 926 >gi|149011758|ref|ZP_01832954.1| Snf2 family protein [Streptococcus pneumoniae SP19-BS75] gi|182684478|ref|YP_001836225.1| snf2 family protein [Streptococcus pneumoniae CGSP14] gi|303255308|ref|ZP_07341378.1| snf2 family protein [Streptococcus pneumoniae BS455] gi|303260148|ref|ZP_07346120.1| snf2 family protein [Streptococcus pneumoniae SP-BS293] gi|303262538|ref|ZP_07348479.1| snf2 family protein [Streptococcus pneumoniae SP14-BS292] gi|303264940|ref|ZP_07350855.1| snf2 family protein [Streptococcus pneumoniae BS397] gi|303267250|ref|ZP_07353114.1| snf2 family protein [Streptococcus pneumoniae BS457] gi|303269560|ref|ZP_07355323.1| snf2 family protein [Streptococcus pneumoniae BS458] gi|147764189|gb|EDK71121.1| Snf2 family protein [Streptococcus pneumoniae SP19-BS75] gi|182629812|gb|ACB90760.1| snf2 family protein [Streptococcus pneumoniae CGSP14] gi|302597676|gb|EFL64752.1| snf2 family protein [Streptococcus pneumoniae BS455] gi|302636255|gb|EFL66749.1| snf2 family protein [Streptococcus pneumoniae SP14-BS292] gi|302638645|gb|EFL69108.1| snf2 family protein [Streptococcus pneumoniae SP-BS293] gi|302640904|gb|EFL71288.1| snf2 family protein [Streptococcus pneumoniae BS458] gi|302643215|gb|EFL73498.1| snf2 family protein [Streptococcus pneumoniae BS457] gi|302645459|gb|EFL75691.1| snf2 family protein [Streptococcus pneumoniae BS397] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|148997416|ref|ZP_01825021.1| Snf2 family protein [Streptococcus pneumoniae SP11-BS70] gi|168575282|ref|ZP_02721245.1| Snf2 family protein [Streptococcus pneumoniae MLV-016] gi|307068167|ref|YP_003877133.1| superfamily II DNA/RNA helicase [Streptococcus pneumoniae AP200] gi|147756471|gb|EDK63512.1| Snf2 family protein [Streptococcus pneumoniae SP11-BS70] gi|183578817|gb|EDT99345.1| Snf2 family protein [Streptococcus pneumoniae MLV-016] gi|306409704|gb|ADM85131.1| Superfamily II DNA/RNA helicase, SNF2 family [Streptococcus pneumoniae AP200] Length = 1032 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|325841031|ref|ZP_08167240.1| SNF2 family N-terminal domain protein [Turicibacter sp. HGF1] gi|325490097|gb|EGC92440.1| SNF2 family N-terminal domain protein [Turicibacter sp. HGF1] Length = 1080 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 75/204 (36%), Gaps = 23/204 (11%) Query: 6 KFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++E++ +++ G + ++ QL Y E + K+ ++ Sbjct: 861 QMKQEMHHEIEEVGVERSRIKILALLMRLRQLCCHPSLYLENYRGE---SAKLNLCMQLV 917 Query: 64 EKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIPL 111 + + +++ F S L L + +++N+ + Sbjct: 918 QDCIASGHKVLIFSQFTSMLEILGRELKAKEIKFLTLTGATKTSDRLALTEQFNQDDTKV 977 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G ++++ + WW++ R + G + V V+ L+ Sbjct: 978 FLISLKAGGTGLNLT-GADVVIHYDPWWNMSAQ-----NQATDRAHRLGQDKTVQVFKLM 1031 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 +NTI+E + K + + ++ Sbjct: 1032 VKNTIEERIQVLQEQKRDLTEAIV 1055 >gi|119025981|ref|YP_909826.1| helicase [Bifidobacterium adolescentis ATCC 15703] gi|118765565|dbj|BAF39744.1| possible helicase [Bifidobacterium adolescentis ATCC 15703] Length = 1279 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 69/213 (32%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L + + ++ ++ + K+ Sbjct: 1057 KLYAAHEQRLRATLTKASDADFNTKKIRILAEFTLLREICCDPRLVYADAKNA---SAKL 1113 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 A+ ++ ++V F S L + + E+ Sbjct: 1114 DAIVELVATCMDEGKKVLVFSQFTSFLELIGARLAEQGVEYYTITGETPKKRRVELVDEF 1173 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +P+ + GLNL G +++V WW+ R + G + Sbjct: 1174 NGNDVPVFLISLKAGNTGLNL-VGASVVVHADPWWNAAAQ-----NQATDRAHRIGQTQD 1227 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ K+ + + Sbjct: 1228 VNVYQIVAKDTIEERILKLQEKKNELARQFTDG 1260 >gi|227495218|ref|ZP_03925534.1| SNF2 family superfamily II DNA/RNA helicase [Actinomyces coleocanis DSM 15436] gi|226831670|gb|EEH64053.1| SNF2 family superfamily II DNA/RNA helicase [Actinomyces coleocanis DSM 15436] Length = 1048 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 76/212 (35%), Gaps = 19/212 (8%) Query: 2 KQYH----KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + ++EL + + + F + + QLA +++K W E + Sbjct: 832 KTYDRYLNQHRKELLALAEDTHSQGFKIITGLNQLRQLALDPQLVEKDKDWPESAKTQAL 891 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEGKI 109 ++ +A +V + S L R++ A + K I+ + Sbjct: 892 IDLLLPLQAEGKKSLVFSQYTSYLQRIRTALNEAGITTSYLDGGTQKRGEVIENFKHSDT 951 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GL L + WW+ E + R + G + V VY Sbjct: 952 NVFLISLKAGGTGLTLTE-AENVFILDPWWNPAT-----ENQAIDRAHRIGQENTVNVYR 1005 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL-NALKK 200 L + +TI+E V+ K + D ++ +K Sbjct: 1006 LCSADTIEEKVMALQVHKRQVADAIIGEEVKA 1037 >gi|77460089|ref|YP_349596.1| SNF2-like [Pseudomonas fluorescens Pf0-1] gi|77384092|gb|ABA75605.1| putative helicase [Pseudomonas fluorescens Pf0-1] Length = 896 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 76/215 (35%), Gaps = 23/215 (10%) Query: 3 QYHKFQ----RELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK-HWKEVHDEK 55 Y + +++ ++ + + +K Q+ ++ + K Sbjct: 664 VYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDATLPARGSTSGK 723 Query: 56 IK--ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWN 105 + + I++ F S L+ ++ + ++E+ Sbjct: 724 LDSLMEMLEELFEEGRRILLFSQFTSMLSLIEDELKKRNVAYALLTGQTRDRRTPVKEFQ 783 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 GK + + G GLNL + ++ + WW+ E R + G ++ V Sbjct: 784 SGKRQIFLISLKAGGVGLNLTE-ADTVIHYDPWWNPAT-----ENQATDRAYRIGQEKPV 837 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 FVY +IA+ T++E + R KS + +L+ K Sbjct: 838 FVYKMIARGTVEEKIQLLQREKSDLAAGVLDGRKA 872 >gi|169832962|ref|YP_001694930.1| Snf2 family protein [Streptococcus pneumoniae Hungary19A-6] gi|168995464|gb|ACA36076.1| Snf2 family protein [Streptococcus pneumoniae Hungary19A-6] Length = 1032 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 72/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + R+ + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQM-RDRLAQVSDQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + Q TI+E + + K + +L+ + Sbjct: 983 VTQGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|168487493|ref|ZP_02712001.1| Snf2 family protein [Streptococcus pneumoniae CDC1087-00] gi|183569678|gb|EDT90206.1| Snf2 family protein [Streptococcus pneumoniae CDC1087-00] Length = 1032 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|148984868|ref|ZP_01818121.1| Snf2 family protein [Streptococcus pneumoniae SP3-BS71] gi|147922890|gb|EDK74006.1| Snf2 family protein [Streptococcus pneumoniae SP3-BS71] gi|301800358|emb|CBW32988.1| putative SNF-family helicase [Streptococcus pneumoniae OXC141] Length = 1034 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 815 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 870 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 871 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 930 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 931 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 984 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 985 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1016 >gi|315613488|ref|ZP_07888396.1| Snf2 family protein [Streptococcus sanguinis ATCC 49296] gi|315314484|gb|EFU62528.1| Snf2 family protein [Streptococcus sanguinis ATCC 49296] Length = 1031 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 24/211 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + R+ + + S ++ Q+ + + ++ K+ +L + Sbjct: 812 QQM-RDRLAQVTDQEFQRSRVEILSGLMRLRQICDTPALFMDDFQGA---SGKLDSLRDL 867 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + +N+G+ Sbjct: 868 LLQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAHDRQEMTKAFNQGERD 927 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G ++ V VY L Sbjct: 928 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEQMVEVYRL 981 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + TI+E + + K + +L+ + Sbjct: 982 ITKGTIEEKIQELQEQKKHLVSQVLDGTESR 1012 >gi|261416687|ref|YP_003250370.1| SNF2-related protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373143|gb|ACX75888.1| SNF2-related protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 1284 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 78/243 (32%), Gaps = 52/243 (21%) Query: 3 QYHKFQRELYCDLQGENIEAFNS-------------ASKTVKCLQLANGAVYYDE----- 44 Y K +L+ E + + + Q+ N + + Sbjct: 1026 LYQKTLEHFMQELEMEQALSEKANDAHALFKRKGIILQMILALKQICNHPATFLKGLAAT 1085 Query: 45 --------------EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSD-------- 80 + ++ K++ L ++ + ++ F Sbjct: 1086 SAQDAAEVPTESAAPQKSNKLESGKMQMLLDLLTSIQEQGEKTLIFTQFAEMGHLLKSTI 1145 Query: 81 ---LARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 L + G T + IQ++ +L + G GLNL + ++ + Sbjct: 1146 ESELGLRTHFYHGGCTQTQRSEMIQDFQENPDCKVLILSLKAGGTGLNLVA-ASQVIHYD 1204 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LWW+ IE R + G KR V V+ I + T +E + L TK I +L +N Sbjct: 1205 LWWNPA-----IEAQATDRAFRIGQKRNVQVHRFITKGTFEEKINALLETKKAIANLTVN 1259 Query: 197 ALK 199 A + Sbjct: 1260 AGE 1262 >gi|268324723|emb|CBH38311.1| hypothetical protein containing helicase conserved C-terminal domain [uncultured archaeon] Length = 205 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 21/186 (11%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA 87 +K Q+ N + ++ K+ LE ++E+ A ++ F L+ Sbjct: 1 MKLKQITNHPALFLQDGSPLPGRSGKLARLEAMLEEVLAEGDKALIFTQFAGMGVMLRHY 60 Query: 88 F-----------PQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVF 134 G T + I + PL + G GLNL N + Sbjct: 61 LQEKLGCETLFLHGGTTKKQRDAMILRFQTDPHGPPLFILSLKAGGIGLNLTA-ANHVFH 119 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F WW+ +E R + G ++ V V+ I T++E + Q + K + + + Sbjct: 120 FDRWWNPA-----VENQATDRVFRIGQRKNVQVHKFICIGTLEERIDQMIERKKELAESI 174 Query: 195 LNALKK 200 + A + Sbjct: 175 IGAGEA 180 >gi|94985591|ref|YP_604955.1| SNF2-related [Deinococcus geothermalis DSM 11300] gi|94555872|gb|ABF45786.1| Superfamily II DNA/RNA helicase, SNF2 family [Deinococcus geothermalis DSM 11300] Length = 1126 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 22/211 (10%) Query: 3 QYHK----FQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + +L + A +K Q A E + K+ Sbjct: 892 LYETVRVTMLERVREELGARGLARSTVAILDALLKLRQAATDPRLVKLEAARRVKGSAKL 951 Query: 57 KALEVIIEKA--NAAPIIVAYHF--------NSDLARLQKAFPQGRTLDKDPCTIQEWNE 106 L + + +++ F + +Q + + Sbjct: 952 DWLTQNLPQMVEEGRRVLIFSQFATLLGLLEETLGELGLGYTKLTGQTKDRATPVQRFQQ 1011 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++P+ + G GLNL + ++ WW+ E R + G + VF Sbjct: 1012 GEVPVFLISLKAGGVGLNLTA-ADTVIHLDPWWNPAA-----ENQATDRAYRIGQDKPVF 1065 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY LIA +++E +L + KS + +L+ Sbjct: 1066 VYKLIAAGSVEERILDLQQRKSALAQGVLDG 1096 >gi|322377010|ref|ZP_08051503.1| Snf2 family protein [Streptococcus sp. M334] gi|321282817|gb|EFX59824.1| Snf2 family protein [Streptococcus sp. M334] Length = 1032 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 72/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + R+ + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQM-RDRLSQVSDQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGMTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|242795848|ref|XP_002482676.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces stipitatus ATCC 10500] gi|218719264|gb|EED18684.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces stipitatus ATCC 10500] Length = 1210 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 66/220 (30%), Gaps = 28/220 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE------KHWKEVHDEK 55 K Y +F + ++ N + + K Sbjct: 707 KAYEQFLNSQ--ECNSIFAGRRQVLYGVDMLRKICNHPDLVTHKLFSTTTGYGDASKSGK 764 Query: 56 IKALEVII--EKANAAPIIVAYHFNSDLARL-----------QKAFPQGRTLDKDPCTIQ 102 ++ ++ ++ K ++ L L + + + + Sbjct: 765 MQVVKALLELWKDTGHKTLLFAQHRIMLNILEKFVNTLSGFNYRRMDGDTPIHRRQLLVD 824 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+N I + G G+NL G + ++ + W+ R + G Sbjct: 825 EFNNSPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDM-----QARERAWRLGQ 878 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 879 KREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKVLKDPKQR 918 >gi|242002592|ref|XP_002435939.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis] gi|215499275|gb|EEC08769.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis] Length = 982 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 31/228 (13%), Positives = 70/228 (30%), Gaps = 37/228 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD----------------EEK 46 Y ++ ++ + + ++ N +D E + Sbjct: 263 LYRQYLD--TPEIASILVGRLQVFVGLINLRKICNHPDLFDGGPKVFKDTDLSTLPAEMR 320 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQGRTL 94 + K+ +E ++ K +++ F D + Sbjct: 321 YGFPGRSGKMAVVESLLKLWKRQGHRVLLFTQSRQMLLILEKFVQDQGYKYMVMTGSTPI 380 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I ++N + + + G G+NL G + +V + W+ + Sbjct: 381 ASRQPAINKFNADTSVFVFLLTTRVGGLGVNLT-GADRVVIYDPDWNPST-----DTQAR 434 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R V +Y L+ TI+E + R K + + +L K+ Sbjct: 435 ERAWRIGQLRDVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 482 >gi|154488684|ref|ZP_02029533.1| hypothetical protein BIFADO_01991 [Bifidobacterium adolescentis L2-32] gi|154082821|gb|EDN81866.1| hypothetical protein BIFADO_01991 [Bifidobacterium adolescentis L2-32] Length = 1272 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 69/213 (32%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L + + ++ ++ + K+ Sbjct: 1050 KLYAAHEQRLRATLTKASDADFNTKKIRILAEFTLLREICCDPRLVYADAKNA---SAKL 1106 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 A+ ++ ++V F S L + + E+ Sbjct: 1107 DAIAELVATCMGEGKKVLVFSQFTSFLELIGARLAEQGVEYYTITGETPKKRRVELVDEF 1166 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +P+ + GLNL G +++V WW+ R + G + Sbjct: 1167 NGNDVPVFLISLKAGNTGLNL-VGASVVVHADPWWNAAAQ-----NQATDRAHRIGQTQD 1220 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ K+ + + Sbjct: 1221 VNVYQIVAKDTIEERILKLQEKKNELARQFTDG 1253 >gi|134081405|emb|CAK46446.1| unnamed protein product [Aspergillus niger] Length = 1223 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 68/222 (30%), Gaps = 32/222 (14%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE------KHWKEVHD 53 + Y F E+ L G ++ N + + + Sbjct: 711 QAYEAFLGSEEMKSILNG----RRQVLFGVDILRKICNHPDLQNHKLMSSTTGYGSGSKS 766 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKDPC 99 K++ ++ ++ K ++ L ++ + Sbjct: 767 GKMQVVKSLLELWKDTGHKTLLFTQHRIMLDILEKFVNSLSGFSYRRMDGTTPIQHRQAM 826 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N+ + + G G+NL G + ++ + W+ + R + Sbjct: 827 VDEFNNDPSLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAWRL 880 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 881 GQKRDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 922 >gi|182415317|ref|YP_001820383.1| non-specific serine/threonine protein kinase [Opitutus terrae PB90-1] gi|177842531|gb|ACB76783.1| Non-specific serine/threonine protein kinase [Opitutus terrae PB90-1] Length = 848 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 72/254 (28%), Gaps = 67/254 (26%) Query: 5 HKFQRELYCDLQGENIEA---FNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 + +REL+ G EA F + ++ ++ Q+ + H Sbjct: 583 QRLERELFDLEAGGASEAKLRFAALTQLLRLRQICCDPRLVEWHGRPAHDHGRDARATPD 642 Query: 53 ------------------------------------DEKIKALEVIIEK--ANAAPIIVA 74 K+ A ++ + + ++V Sbjct: 643 APGPQLSTLNSQLSLPPPTLNAQPSAPLSAPPPFPDSAKLDAFRELLAEAVDDGHRVLVF 702 Query: 75 YHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 F S LA + + N IP+ + G GL Sbjct: 703 SQFTSLLALLREELAVQETAHCYLDGSMPPRARQAEVDRFQNSPDIPVFLISLKAGGTGL 762 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + +V F WW+ E R + G R V Y LIA T++E VL Sbjct: 763 NLTA-ADTVVHFDPWWNPAA-----EAQATDRAHRIGQSRIVTSYKLIASGTVEEKVLAL 816 Query: 184 LRTKSTIQDLLLNA 197 K + + A Sbjct: 817 QEEKRALLAGVFEA 830 >gi|305681970|ref|ZP_07404774.1| SNF2 family N-terminal domain protein [Corynebacterium matruchotii ATCC 14266] gi|305658443|gb|EFM47946.1| SNF2 family N-terminal domain protein [Corynebacterium matruchotii ATCC 14266] Length = 968 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 26/213 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y + +L L+ K Q+ N ++ + K+ Sbjct: 737 LYTAYVNDLTTQLEQAEGIGRRGLVLASLTKIKQICNHPAHFLGDGSPMLRGNHHRSGKV 796 Query: 57 KALEVIIE--KANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 + L I+E + + +++ + + + G + +Q+ Sbjct: 797 EELMQIVENARDHGEKVLIFTQYKAFGDMLTPYLSDYYGQKIPFLHGGVSKSGRDIMVQQ 856 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + P + + G GLNL NI+V WW+ +E R + G Sbjct: 857 FQAPDGAPAMVLSLKAGGTGLNLTA-ANIVVHMDRWWNPA-----VENQATDRAYRIGQD 910 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + VFVY LI T++E + + KS + ++ Sbjct: 911 KNVFVYKLITAGTVEERIHDIISGKSELAAAMI 943 >gi|225022844|ref|ZP_03712036.1| hypothetical protein CORMATOL_02890 [Corynebacterium matruchotii ATCC 33806] gi|224944368|gb|EEG25577.1| hypothetical protein CORMATOL_02890 [Corynebacterium matruchotii ATCC 33806] Length = 1054 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 26/213 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y + +L L+ K Q+ N ++ + K+ Sbjct: 823 LYTAYVNDLTTQLEQAEGIGRRGLVLASLTKIKQICNHPAHFLGDGSPMLRGNHHRSGKV 882 Query: 57 KALEVIIE--KANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 + L I+E + + +++ + + + G + +Q+ Sbjct: 883 EELMQIVENARDHGEKVLIFTQYKAFGDMLTPYLSDYYGQKIPFLHGGVSKSGRDIMVQQ 942 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + P + + G GLNL NI+V WW+ +E R + G Sbjct: 943 FQAPDGAPAMVLSLKAGGTGLNLTA-ANIVVHMDRWWNPA-----VENQATDRAYRIGQD 996 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + VFVY LI T++E + + KS + ++ Sbjct: 997 KNVFVYKLITAGTVEERIHDIISGKSELAAAMI 1029 >gi|317156769|ref|XP_001825991.2| DNA repair protein Rhp26/Rad26 [Aspergillus oryzae RIB40] Length = 1192 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 66/222 (29%), Gaps = 32/222 (14%) Query: 6 KFQRELYCDLQGENIEAF------NSASKTVKCLQLANGA------VYYDEEKHWKEVHD 53 K QR+ Y G ++ N + + + Sbjct: 677 KLQRQAYKSFLGSEEMQSILRGRRQVLYGVDILRKICNHPDLQSHKLTSHKAGYGNPDKS 736 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKDPC 99 K++ ++ ++ K ++ L ++ + Sbjct: 737 GKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQSM 796 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N + + G G+NL G + ++ + W+ + R + Sbjct: 797 VDEFNNNPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAWRL 850 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 851 GQKRDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 892 >gi|110639993|ref|YP_680203.1| SNF2 family DNA/RNA helicase [Cytophaga hutchinsonii ATCC 33406] gi|110282674|gb|ABG60860.1| superfamily II DNA/RNA helicase, SNF2 family [Cytophaga hutchinsonii ATCC 33406] Length = 977 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 79/213 (37%), Gaps = 22/213 (10%) Query: 2 KQYHKFQ---RELYCD-LQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEK 55 ++Y K + R L + + + + K Q+AN ++ E Sbjct: 756 QEYEKTKSNYRNLILESIDEKGLAGSQILLLQGLTKLRQIANHPSLVEDTFEGTSGKMED 815 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNE 106 + + + I+V F L + A+ G+T D+ + NE Sbjct: 816 VNYMLDNALEL-GHKILVFSQFVKHLHLYAKLLDKAGIKYAYLDGQTRDRQAEVERFQNE 874 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I + + G GLNL + + WW+ +E V R + G K VF Sbjct: 875 EGIRVFLISLKAGGLGLNLTA-ADYVFLLDPWWNPA-----VEAQAVDRAYRIGQKNTVF 928 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y I +NT++E +L + K + + L+++ + Sbjct: 929 TYKFITKNTVEEKILNLQKNKLKLANDLISSEE 961 >gi|319942795|ref|ZP_08017097.1| hypothetical protein HMPREF9464_02316 [Sutterella wadsworthensis 3_1_45B] gi|319803605|gb|EFW00561.1| hypothetical protein HMPREF9464_02316 [Sutterella wadsworthensis 3_1_45B] Length = 1304 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 65/187 (34%), Gaps = 21/187 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDL 81 + Q++N + +E K K +AL ++ + + +V F Sbjct: 1100 QILRMILNLKQISNSPSQFQKEFVDKP-DSGKAEALLELLRRCRQSGRKALVFTQFREMG 1158 Query: 82 ARLQKAF-----------PQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGG 129 RL + G K + N + + G GLNL Sbjct: 1159 ERLVRWIEDATGRKPEFLHGGVPAAKRMEMVDAFQNNPDSEIFILSLKAGGTGLNLTA-A 1217 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ + LWW+ +E R + G +R V VY I T +E V + L+ K Sbjct: 1218 SAVIHYDLWWNPA-----VEDQASDRAWRIGQRRDVVVYRFITAGTFEEKVNEMLKKKRE 1272 Query: 190 IQDLLLN 196 + DL + Sbjct: 1273 LADLAVG 1279 >gi|88602942|ref|YP_503120.1| SNF2-like protein [Methanospirillum hungatei JF-1] gi|88188404|gb|ABD41401.1| SNF2-related protein [Methanospirillum hungatei JF-1] Length = 1048 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 68/209 (32%), Gaps = 22/209 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ +L A + + Q+ N +K K K+ L Sbjct: 815 LYQAVVLDMAKNLDKVEGIARKGAILAAITRLKQICNHPGRVGRDKTIKAERSGKVSRLL 874 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEG 107 +IE+ + ++ + + L + K I+E+ Sbjct: 875 EMIEEITSEGDSALIFSQYATFAEELAGMIEKQGDTPVLLLTGSTPRKKREQMIEEFQAS 934 Query: 108 KIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P+ + G GLNL + WW+ +E R + G KR V Sbjct: 935 TTPIIFVISLKAGGTGLNLTK-ATHVFHVDRWWNPA-----VEDQATDRTYRIGQKRNVQ 988 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ +I T++E + + K T+ +L Sbjct: 989 VHLMITAGTLEERIDLINQEKRTLAKEVL 1017 >gi|218289771|ref|ZP_03493971.1| Non-specific serine/threonine protein kinase [Alicyclobacillus acidocaldarius LAA1] gi|218240062|gb|EED07247.1| Non-specific serine/threonine protein kinase [Alicyclobacillus acidocaldarius LAA1] Length = 949 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 73/219 (33%), Gaps = 26/219 (11%) Query: 3 QYHKFQRELYCDLQGE---NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y +++ + + ++ Q+ + K+++L Sbjct: 714 MYQALVDQMFAQIARGPSAMARRGAILTTLLRLKQVCDHPALIS-GGRPLAKRSGKLRSL 772 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWNE 106 + +V F L G + ++++ Sbjct: 773 LDRLRVVVDGGEAALVFTQFREMGEMLCAAVEDELGFRPAFLHGGMSAKARGEIVEQYQA 832 Query: 107 GK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ P+L + G GLNL N + + WW+ +E R + G R Sbjct: 833 GRMESPVLILSLRAGGVGLNLTR-ANHVFHYDRWWNPA-----VEDQATDRAYRIGQLRG 886 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V V+ +I T++E + + LR K + D +++ + ++ + Sbjct: 887 VEVHKMICVGTLEERIDEMLRAKRALSD-VVSRVSEDWV 924 >gi|281492645|ref|YP_003354625.1| SWF/SNF family DNA/RNA helicase [Lactococcus lactis subsp. lactis KF147] gi|281376309|gb|ADA65800.1| DNA/RNA helicase, SWF/SNF family [Lactococcus lactis subsp. lactis KF147] Length = 1034 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 69/206 (33%), Gaps = 23/206 (11%) Query: 6 KFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++ ++ + + + Q+ N + ++ K++ L ++ Sbjct: 820 ELMQKQVLEMDSAALSRSRIEILAGITRLRQICNTPALFMDDYK---GSSGKLERLRELL 876 Query: 64 --EKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 K + ++ F + + +Q +N G Sbjct: 877 AQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDA 936 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL ++++ LWW+ +E + R + G K V V LI Sbjct: 937 FLVSLKAGGVGLNLTS-ADVVILVDLWWNPA-----VEEQAIARAHRMGQKNTVEVIRLI 990 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +++ K + +L Sbjct: 991 TKGTIEEKIMEIQERKKDLIANVLEG 1016 >gi|229490063|ref|ZP_04383916.1| SNF2 family domain protein [Rhodococcus erythropolis SK121] gi|229323164|gb|EEN88932.1| SNF2 family domain protein [Rhodococcus erythropolis SK121] Length = 938 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y E+ ++G S K Q+ N ++ + + K+ Sbjct: 704 LYRAVVDEMMAQIKGTEGMKRKGAVLSALTKLKQVCNHPAHFLRDGSPVMRRGQHRSGKL 763 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQE 103 +E I+E + +++ F + G + ++ Sbjct: 764 GLVEDIVESVTADDEKVLLFTQFREFGELVVPYLADRFTTEVPFLHGGVSKAGRDAMVEA 823 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + EG P++ + G GLNL N +V WW+ +E R + G + Sbjct: 824 FQGEGGPPIMVLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRVFRIGQR 877 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V V ++ T++E + + +KS + +L + Sbjct: 878 KNVQVRKMVCVGTLEERIDTMIASKSELAELAVG 911 >gi|325279022|ref|YP_004251564.1| SNF2-related protein [Odoribacter splanchnicus DSM 20712] gi|324310831|gb|ADY31384.1| SNF2-related protein [Odoribacter splanchnicus DSM 20712] Length = 994 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 75/213 (35%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFN------SASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + Q + + E ++ Q+AN + E + K Sbjct: 776 KVYEEEQSRVRNYILSERENQGELRSDFMVLKALIRLRQIANHPRLV---ETGYEGNSGK 832 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEW 104 + ++ + + ++V F L + A G T D++ Sbjct: 833 FSEVFRMLGEVIASGHKVLVFSSFVKYLKMVAEETMVRGWKYAMLTGLTADREQTIRHFQ 892 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + + G GLNL + + WW++ E V+R + G KRA Sbjct: 893 ADPECRIFLISLKAGGVGLNLTE-ADYVFILDPWWNVAA-----ENQAVSRAHRIGQKRA 946 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VFVY I T++E +L K + D ++ A Sbjct: 947 VFVYRFITAGTLEEKILAIQERKQRLADSVITA 979 >gi|299822681|ref|ZP_07054567.1| Snf2 family helicase [Listeria grayi DSM 20601] gi|299816210|gb|EFI83448.1| Snf2 family helicase [Listeria grayi DSM 20601] Length = 1063 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 70/197 (35%), Gaps = 21/197 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIV 73 Q + + + Q+ + + + K+ L I+ + N +++ Sbjct: 856 QDDETNRMKLLAGLTRLRQICCDPTLFVDGY---QGGSGKLLQLLDTIQTARENGKRMLI 912 Query: 74 AYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 F S L + + +NEG + + G GL Sbjct: 913 FSQFTSMLGIIQSELKKIGMEYFYMDGQTPSKERVNLVNAFNEGGKDIFLISLKAGGTGL 972 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL G + ++ + LWW+ +E +R + G K V V ++A+ TI+E + Sbjct: 973 NLT-GADTVILYDLWWNPA-----VEEQAASRAHRIGQKNVVQVIRMVAKGTIEERIFDL 1026 Query: 184 LRTKSTIQDLLLNALKK 200 + K + D ++ +K Sbjct: 1027 QKKKQALIDDIIQPGEK 1043 >gi|15674024|ref|NP_268199.1| SWI/SNF family helicase [Lactococcus lactis subsp. lactis Il1403] gi|12725092|gb|AAK06140.1|AE006434_2 SWI/SNF family helicase [Lactococcus lactis subsp. lactis Il1403] Length = 1034 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 69/206 (33%), Gaps = 23/206 (11%) Query: 6 KFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++ ++ + + + Q+ N + ++ K++ L ++ Sbjct: 820 ELMQKQVLEMDSAALSRSRIEILAGITRLRQICNTPALFMDDYK---GSSGKLERLRELL 876 Query: 64 --EKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 K + ++ F + + +Q +N G Sbjct: 877 AQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDA 936 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL ++++ LWW+ +E + R + G K V V LI Sbjct: 937 FLVSLKAGGVGLNLTS-ADVVILVDLWWNPA-----VEEQAIARAHRMGQKNTVEVIRLI 990 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +++ K + +L Sbjct: 991 TKGTIEEKIMEIQERKKDLIANVLEG 1016 >gi|224543399|ref|ZP_03683938.1| hypothetical protein CATMIT_02600 [Catenibacterium mitsuokai DSM 15897] gi|224523686|gb|EEF92791.1| hypothetical protein CATMIT_02600 [Catenibacterium mitsuokai DSM 15897] Length = 856 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 79/215 (36%), Gaps = 22/215 (10%) Query: 5 HKFQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++ L+ E +E + Q+ N + + ++ K L+ + Sbjct: 632 KEVEKAEDLILESEGMERRGIVLGLLTRLKQICNHPDQFIHDTNFNPKDSGKYAMLKKLC 691 Query: 64 --EKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN--EGK 108 ++V + + G K ++++N + Sbjct: 692 ETIYEKRERVLVFTQYKEMCEPLSDYLESIFHKKGYIIHGGIPAKKRTEIVEKFNNEDEY 751 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +P + + G GLNL N ++ F WW+ +E R + G + VFV+ Sbjct: 752 VPYIVLSLKAAGTGLNLTA-ANHVIHFDRWWNPA-----VENQASDRAYRIGQTKEVFVH 805 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L++ TI+E + Q + +K + + +L +++ I Sbjct: 806 KLVSNGTIEEKINQIIESKQELAESILATGQEKWI 840 >gi|326407578|gb|ADZ64649.1| DNA/RNA helicase, SWF/SNF family [Lactococcus lactis subsp. lactis CV56] Length = 1034 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 69/206 (33%), Gaps = 23/206 (11%) Query: 6 KFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++ ++ + + + Q+ N + ++ K++ L ++ Sbjct: 820 ELMQKQVLEMDSAALSRSRIEILAGITRLRQICNTPALFMDDYK---GSSGKLERLRELL 876 Query: 64 --EKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 K + ++ F + + +Q +N G Sbjct: 877 AQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDA 936 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL ++++ LWW+ +E + R + G K V V LI Sbjct: 937 FLVSLKAGGVGLNLTS-ADVVILVDLWWNPA-----VEEQAIARAHRMGQKNTVEVIRLI 990 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +++ K + +L Sbjct: 991 TKGTIEEKIMEIQERKKDLIANVLEG 1016 >gi|213408333|ref|XP_002174937.1| ATP-dependent DNA helicase Snf22 [Schizosaccharomyces japonicus yFS275] gi|212002984|gb|EEB08644.1| ATP-dependent DNA helicase Snf22 [Schizosaccharomyces japonicus yFS275] Length = 1489 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 76/226 (33%), Gaps = 33/226 (14%) Query: 1 MKQYHKFQRELYCDLQGEN--IEAFNSAS-KTVKCLQLANGAVYYDEEKHWKEVHD---- 53 ++ Y + ++ + ++ ++ N ++E + + Sbjct: 923 LRLYQQMKKHGILFVADGEKGRTGMKGLQNTVMQLKKICNHPFVFEEVEQAIDPEGTNYD 982 Query: 54 ------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 K + L+ ++ K ++ + ++ ++ + Sbjct: 983 LLWRAAGKFELLDRVLPKLFRTGHRTLIFFQMTQIMSIMEDYLRYRNWKYLRLDGSTKAE 1042 Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N+ I + + G GLNLQ + ++ F W+ + + Sbjct: 1043 DRSALLADFNDRNSDIYVFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQ 1096 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V + LI +I+E +L R + K + ++ A K Sbjct: 1097 DRAHRIGQTKEVRILRLITDKSIEENILARAQYKLDLDGKVIQAGK 1142 >gi|254454608|ref|ZP_05068045.1| SWI/SNF family helicase [Octadecabacter antarcticus 238] gi|198269014|gb|EDY93284.1| SWI/SNF family helicase [Octadecabacter antarcticus 238] Length = 702 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 3 QYHKFQRELYC-------DLQGENIEAFN------SASKTVKCLQLANGAVYYDEEKHWK 49 QY + +RE + + EA N Q+ N ++ + K Sbjct: 467 QYCQLEREQAALYQTTMNQIMEKIEEADNIERRGLVLKLITALKQICNHPSHFLKHKTLD 526 Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDK 96 K L +I+ N +++ + LQK G T Sbjct: 527 AEKSGKTAMLMELIDNIAANEEKLLIFTQYTQMGNLLQKLITEKFGLEPLFLHGGLTRQS 586 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ + + L + G GLNL +V F LWW+ +E R Sbjct: 587 RDEIVDDFQTKPYVKTLILSLKAGGTGLNLTA-AQNVVHFDLWWNPA-----VEAQATDR 640 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G V V+ LI + T +E + L+ K + D+ ++ +K Sbjct: 641 AYRIGQTSNVMVHRLITRGTFEEKINTMLKDKRELADMAISKGEK 685 >gi|124007753|ref|ZP_01692456.1| helicase, SNF2 family [Microscilla marina ATCC 23134] gi|123986875|gb|EAY26647.1| helicase, SNF2 family [Microscilla marina ATCC 23134] Length = 1207 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 72/213 (33%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +L G+ E Q+ N +Y + H K + Sbjct: 978 LYQNVVDMIMRELNGKQGEEGKTRKGLIFQLMNALKQICNHPSHYLKHAHLDPGQSGKTQ 1037 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEW 104 L +++ N ++ + G + K ++++ Sbjct: 1038 LLLSLLDNIYENGEKTLIFTQYREMGDLLLPLLEQRYHNTPLWLHGGVSRKKRDQMVEDF 1097 Query: 105 NE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL + ++ + LWW+ +E R + G + Sbjct: 1098 QNKPHVKTMLLSLKAGGTGLNLTK-ASNVIHYDLWWNPA-----VENQATDRAYRIGQQN 1151 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY +I Q T +E + ++TK + DL ++ Sbjct: 1152 NVMVYRMITQGTFEEKINAMIQTKKELADLTVS 1184 >gi|84495493|ref|ZP_00994612.1| SNF2-like [Janibacter sp. HTCC2649] gi|84384986|gb|EAQ00866.1| SNF2-like [Janibacter sp. HTCC2649] Length = 1099 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 72/200 (36%), Gaps = 16/200 (8%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 ++ L + + Q+A D E + K++AL + + Sbjct: 887 RQRLLGLIDDLDGNRIAILRALTVLRQMALDPSLVDAEAYGGVAPSAKVEALVEQVAELA 946 Query: 66 ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 A +V F S L+ ++ + ++E+ EG+ P+ Sbjct: 947 AEGHRALVFSQFTSFLSIVRDRLEEEGIAYAYLDGSTRNRADVVKEFREGEAPVFLISLK 1006 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL L + + WW+ E + R + G ++V VY L++ +TI+ Sbjct: 1007 AGGFGLTLTE-ADYVFVLDPWWNPAA-----ENQAIDRAHRIGQTKSVNVYRLVSTDTIE 1060 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E V+ K + +++ Sbjct: 1061 EKVVALQDKKRDLFARVVDD 1080 >gi|109898913|ref|YP_662168.1| SNF2-related [Pseudoalteromonas atlantica T6c] gi|109701194|gb|ABG41114.1| SNF2-related protein [Pseudoalteromonas atlantica T6c] Length = 1437 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 75/215 (34%), Gaps = 27/215 (12%) Query: 4 YHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + ++ +A ++ VK Q E + K+ Sbjct: 1215 YEALRLNAIDNISQSGQQANAGEQRIRMLAELVKLRQACCNPKLVMAETT---IPSAKLA 1271 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN 105 AL+ ++E+ N ++ F L +++ + ++ + Sbjct: 1272 ALDELLEELKLNNHKALIFSQFVGHLQLIKQHIEAKGFSYQYLDGSTPQKQRQASVNAFQ 1331 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL + ++ WW+ +E R + G R V Sbjct: 1332 RGEGDIFLISLKAGGSGLNLTA-ADYVIHMDPWWNPA-----VEEQASDRAHRIGQLRPV 1385 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Y L+ +NTI+E ++ + K + D LL + Sbjct: 1386 TIYRLVTRNTIEEKIVSLHQHKRDLADTLLEGNEA 1420 >gi|83774735|dbj|BAE64858.1| unnamed protein product [Aspergillus oryzae] Length = 977 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 66/222 (29%), Gaps = 32/222 (14%) Query: 6 KFQRELYCDLQGENIEAF------NSASKTVKCLQLANGA------VYYDEEKHWKEVHD 53 K QR+ Y G ++ N + + + Sbjct: 568 KLQRQAYKSFLGSEEMQSILRGRRQVLYGVDILRKICNHPDLQSHKLTSHKAGYGNPDKS 627 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKDPC 99 K++ ++ ++ K ++ L ++ + Sbjct: 628 GKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQSM 687 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N + + G G+NL G + ++ + W+ + R + Sbjct: 688 VDEFNNNPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAWRL 741 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 742 GQKRDVTVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 783 >gi|320587466|gb|EFW99946.1| DNA repair protein rhp26 [Grosmannia clavigera kw1407] Length = 1202 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 77/223 (34%), Gaps = 33/223 (14%) Query: 2 KQYHKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------H 52 + Y F R E+ L A S ++ N + + KE Sbjct: 687 QAYELFLRSDEMSAILNR----ARQSLYGIDILRKICNHPDLAEPQLKHKEGYNWGSPSK 742 Query: 53 DEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDK-DPC 99 K++ ++ ++ K ++ F L +Q G+T K Sbjct: 743 SGKMQVVKALLQMWKRFGHKTLLFCQGTQMLDILEIFTQSLGDIQYLRMDGKTPIKDRQT 802 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + ++ + G G+NL G + ++ F W+ + R + Sbjct: 803 LVDRFNNDPQLNVFLLTTKVGGLGVNLT-GADRVIIFDPDWNPST-----DVQARERAWR 856 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 857 LGQKRQVTIYRLMTAGTIEEKIYHRQIFKQFLTNKVLKDPKQR 899 >gi|260907213|ref|ZP_05915535.1| DNA/RNA helicase, superfamily II, SNF2 family protein [Brevibacterium linens BL2] Length = 1132 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 72/206 (34%), Gaps = 18/206 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--DEKIKALEVI 62 K +++L + + F LA DE+ L+ I Sbjct: 919 QKERKKLLGLINDMDRNRFAIFRSLTLLRMLAIDPYLIDEKYEAIGSSKLSALFSHLDDI 978 Query: 63 IEKANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 I + I+ F S L+R+ + I ++ G+ P+ Sbjct: 979 IAE--GHRTIIFSQFTSFLSRVGEQLDHRNINYCYLDGSTRNRGAVIDDFRAGEAPIFLI 1036 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GL L + + WW+ +E V R + G + V VY ++++ Sbjct: 1037 SLKAGGFGLTLTE-ADYVFLLDPWWNPA-----VEAQAVDRAHRIGQTKNVMVYRMVSEK 1090 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKK 200 TI+E VL K+ + D L+N + Sbjct: 1091 TIEEKVLALQERKAQLFDSLVNEGEG 1116 >gi|91214800|ref|ZP_01251773.1| DEAD/DEAH box helicase-like protein [Psychroflexus torquis ATCC 700755] gi|91187227|gb|EAS73597.1| DEAD/DEAH box helicase-like protein [Psychroflexus torquis ATCC 700755] Length = 1216 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 81/215 (37%), Gaps = 21/215 (9%) Query: 2 KQYHKFQ----RELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y +F+ +++ ++ E + K Q+ N D+EK + + Sbjct: 994 KVYDQFKDYFRQQILDQIENEGVNRSQIYILQGLTKLRQICNSTALADKEKDYGNDSAKL 1053 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNE 106 + + + +K ++V F L ++ + G+T ++ N Sbjct: 1054 DELVRHLKQKVAKHKVLVFSQFVGMLQLVKERLDEEDIKFEYLDGQTKKREEKVNNFQNN 1113 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K+ + + G GLNL + + WW+ Q I+R + G + V Sbjct: 1114 PKVRVFLISLKAGGTGLNLTE-ADYVYLIDPWWNPAVESQAIDRC-----YRIGQDKKVM 1167 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Y +I +++I+E +L K +I ++ + + Sbjct: 1168 AYRMICKDSIEEKILSLQDKKKSIAADVIRIDEGK 1202 >gi|167535609|ref|XP_001749478.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772106|gb|EDQ85763.1| predicted protein [Monosiga brevicollis MX1] Length = 1903 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 78/228 (34%), Gaps = 31/228 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK------ 55 + Y + + Y L + + ++ + AN +D+ + E HD Sbjct: 881 RFYKELLAKNYSFLTATTQGVSSLNNLLMQLRKCANHPYLFDDAEPEVEDHDAMVKLLVG 940 Query: 56 ------IKALEVIIEKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDK---------DPC 99 + + + K +++ L +G + Sbjct: 941 ASGKTLLLDMMLRKLKEQGHRVLIFSQMTRMLDILQDIMMYRGYHCCRLDGNTDILTRQE 1000 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E++ + + G G+NL + ++ F W+ + + R Sbjct: 1001 QIDEFSRPDSDAFVFLLSTRAGGLGINLTT-ADTIIIFDSDWNP-----HADLQALARAH 1054 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL-LNALKKETIH 204 + G K V VY ++ NT++E +L+R R K + + ++ LKK + Sbjct: 1055 RIGQKNLVMVYRFVSVNTVEERILRRAREKLRLDQAVRMDKLKKSELD 1102 >gi|289168337|ref|YP_003446606.1| HepA, superfamily II DNA/RNA helicases, SNF2 family [Streptococcus mitis B6] gi|288907904|emb|CBJ22744.1| HepA, superfamily II DNA/RNA helicases, SNF2 family [Streptococcus mitis B6] Length = 1032 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 72/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + R+ + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQM-RDRLAQVSDQEFQRSRVEILSGLMRLRQICDTPGLFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTRGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|323357442|ref|YP_004223838.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] gi|323273813|dbj|BAJ73958.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] Length = 1063 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 77/215 (35%), Gaps = 24/215 (11%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + ++ L L +F QLA DE E K+ Sbjct: 840 KLYDRRFHRERQRLLGLLDDAEGNSFAIFRSLTMLRQLALDPALVDEG----EAPSAKLD 895 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF--------PQGRTLDKDPCTIQEWNEG 107 ALE ++ +A ++V F L ++ T I + +G Sbjct: 896 ALEELLVEAAAEGHRVLVLSQFTRFLRAARQRCTDAGLASGYLDGTTTNRQAEIDRFRDG 955 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P F + G GLNL + +V WW+ +E + R + G R V V Sbjct: 956 DDPAFFVSLKAGGVGLNL-VEADYVVLLDPWWNPA-----VEDQAIDRAHRIGQTRPVIV 1009 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Y L++ +T+++ V+ K+ + +L+ E Sbjct: 1010 YRLVSSDTVEQKVVALREAKAELFSRVLDGGADEG 1044 >gi|187736256|ref|YP_001878368.1| Non-specific serine/threonine protein kinase [Akkermansia muciniphila ATCC BAA-835] gi|187426308|gb|ACD05587.1| Non-specific serine/threonine protein kinase [Akkermansia muciniphila ATCC BAA-835] Length = 1171 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 71/211 (33%), Gaps = 21/211 (9%) Query: 2 KQYH-KFQR--ELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + +R + L + N ++ Q+ D + ++ Sbjct: 943 QLYKAELRRIQQALLGLDSDESVKKNSFAILQGLMRLRQICCHPGLVDPKYAKEDSAKMT 1002 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNE 106 + + ++V F S L ++ + G+T D+ + Sbjct: 1003 ALFYLLDQLREEGHKVLVFSQFVSMLEIIKNRLEAENRPLNYLTGQTKDRRGEIEKFQTT 1062 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL + +V + WW+ +E + R + G K V Sbjct: 1063 KDPSVFLLSLKAGGAGLNLTS-ASYVVLYDPWWNPA-----VESQAIDRTHRIGQKNKVI 1116 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+ +++++E + K+ + +L Sbjct: 1117 AYRLLTKDSVEEKIRILQHQKNQLVANVLGD 1147 >gi|296331256|ref|ZP_06873728.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676243|ref|YP_003867915.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151371|gb|EFG92248.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414487|gb|ADM39606.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. spizizenii str. W23] Length = 922 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ + + S + Q+ + Y +E + + K++ Sbjct: 694 LYEQLVKDTFDHMTSLTGMQRKALILSMLGRLKQICDHPALYLKEDQTELLAGRSVKLEK 753 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWN 105 L ++ +A ++ + ++ + + + ++++ Sbjct: 754 LLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDTLVEKFQ 813 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + P L + G GLNL N ++ + WW+ +E R + G +R V Sbjct: 814 KKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQERFV 867 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +I TI+E + L +K T+ D ++ + Sbjct: 868 HVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 899 >gi|313608461|gb|EFR84385.1| SNF2 family helicase [Listeria monocytogenes FSL F2-208] Length = 966 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 72/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L E + + Q+ + E + K+ L I+ Sbjct: 745 EKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 801 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 802 TARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGENDIF 861 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 862 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 915 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + K + D L+ Sbjct: 916 KGTIEERIFDLQKKKQALVDELIQ 939 >gi|307705331|ref|ZP_07642193.1| SNF2 family N-terminal domain protein [Streptococcus mitis SK597] gi|307621118|gb|EFO00193.1| SNF2 family N-terminal domain protein [Streptococcus mitis SK597] Length = 1048 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 76/212 (35%), Gaps = 25/212 (11%) Query: 6 KFQR--ELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + +R E+ + I+ + + Q+ N + E+ K+ +L Sbjct: 831 QLRRMQEMVAGASADEIKRHKIEILAGLTRLRQICNTPALFLEDYK---GDSGKMDSLFE 887 Query: 62 IIE--KANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKI 109 +++ + + ++ F S L DK + +N+G+ Sbjct: 888 LLDTIREKGSRPLIFSQFTSMLDLIEQELEKKEMSHFKITGQTPSDKRQEMVNLFNQGEK 947 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL G + ++ LWW+ ++R + G + V VY Sbjct: 948 DCFLISLKAGGTGLNLT-GADTVILCDLWWNPAVEM-----QAISRSHRLGQTKQVDVYR 1001 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI TI+E + + +K + + +L + Sbjct: 1002 LITLGTIEEKIQELQESKKELFNTVLEGQESR 1033 >gi|312277649|gb|ADQ62306.1| Superfamily II DNA/RNA helicase, SNF2 family [Streptococcus thermophilus ND03] Length = 1031 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 23/206 (11%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ L E S + Q+ + + + K+ +L ++ Sbjct: 815 QQMQQGLISASDQEINRRKVEILSGITRLRQICDTPALFMDYAG----DSGKLDSLRDLL 870 Query: 64 --EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 K + +++ F L + D + +N+G Sbjct: 871 SQIKESDHRVLIFSQFRGMLDITEELLQELGISSYKLTGSTPSDSRQEMTRAFNQGSRDA 930 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ ++R + G K+ V V+ LI Sbjct: 931 FLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQKQNVEVFRLI 984 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ K + +L+ Sbjct: 985 TRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|46447008|ref|YP_008373.1| hypothetical protein pc1374 [Candidatus Protochlamydia amoebophila UWE25] gi|46400649|emb|CAF24098.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 1161 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 82/212 (38%), Gaps = 21/212 (9%) Query: 2 KQYHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y RE L +G + + + Q+ + +++ + K + Sbjct: 940 RSYAASAREELSQLVKKEGFERVQIHVLATLTRLKQICCHPAIFAKDRP-ENGDSSKYEM 998 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWN-EG 107 L +++ + ++ + L +++ + + ++++N + Sbjct: 999 LLELLQTLMESKHKTVIFSQYTRMLNIMREDLEKQGIRFEYLDGSSKNRLSIVKKFNEDP 1058 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 IP+ + G GLNL G + ++ + +WW+ +E R + G K +V Sbjct: 1059 NIPIFLVSLKAGGSGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRLGQKNSVSS 1112 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y LI NTI+E +L+ K + +++ + Sbjct: 1113 YKLITLNTIEEKILELHNRKKGLVKEVVSRDE 1144 >gi|302892777|ref|XP_003045270.1| transcription-coupled repair protein CSB/RAD26 [Nectria haematococca mpVI 77-13-4] gi|256726195|gb|EEU39557.1| transcription-coupled repair protein CSB/RAD26 [Nectria haematococca mpVI 77-13-4] Length = 1164 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 77/221 (34%), Gaps = 29/221 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DE 54 K Y F + ++ S ++ N D+ K + Sbjct: 675 KAYETFLKS--DEVSSILSRTRQSLYGIDILRKICNHPDLLDKSLGSKPGYDFGNPKLSA 732 Query: 55 KIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTI 101 K++ + +++K N ++ L ++K + +D+ I Sbjct: 733 KLQLTKDLLQKVMIPNGHKTLLFSQGKQMLNIIEKCIRECDISYVRMDGETPVDQRQPMI 792 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N + I + + G G NL G + ++ F W+ + R + G Sbjct: 793 DKFNEDPNIHVFLMTTRTGGLGTNLT-GADRIIIFDPDWNPST-----DLQARERAWRLG 846 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K+ V +Y L+ + TI+E + R K + + +L K+ Sbjct: 847 QKKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQR 887 >gi|226307453|ref|YP_002767413.1| helicase [Rhodococcus erythropolis PR4] gi|226186570|dbj|BAH34674.1| putative helicase [Rhodococcus erythropolis PR4] Length = 938 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y E+ ++G S K Q+ N ++ + + K+ Sbjct: 704 LYRAVVDEMMAQIKGTEGMKRKGAVLSALTKLKQVCNHPAHFLRDGSPVMRRGQHRSGKL 763 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQE 103 +E I+E + +++ F + G + ++ Sbjct: 764 GLVEDIVESVTADDEKVLLFTQFREFGELVVPYLADRFTTEVPFLHGGVSKAGRDAMVEA 823 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + P++ + G GLNL N +V WW+ +E R + G + Sbjct: 824 FQGADGPPIMVLSLKAGGTGLNLTA-ANHVVHLDRWWNPA-----VENQATDRVFRIGQR 877 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V V ++ T++E + + +KS + +L + Sbjct: 878 KNVQVRKMVCVGTLEERIDTMIASKSELAELAVG 911 >gi|320093666|ref|ZP_08025543.1| hypothetical protein HMPREF9005_0155 [Actinomyces sp. oral taxon 178 str. F0338] gi|319979382|gb|EFW10867.1| hypothetical protein HMPREF9005_0155 [Actinomyces sp. oral taxon 178 str. F0338] Length = 1048 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 65/206 (31%), Gaps = 18/206 (8%) Query: 3 QYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + ++ + + + QLA D + Sbjct: 831 IYEQHLTRERARALSLMEDFPRNRMDVLASITRLRQLALDPALVDGAYAHVGSAKTEYLV 890 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIP 110 +++ +V F S LAR+++ I+ + G Sbjct: 891 GQLVQIVPRGHQALVFSQFTSFLARIRRALERRGITVAQLDGATRGRARVIERFRSGAAS 950 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GL L + + WW+ E V R + G + V VY L Sbjct: 951 VFLISLKAGGTGLTLTE-ADYVYVMDPWWNPAA-----EAQAVDRAHRIGQSKKVNVYRL 1004 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A +TI+ V++ K + +++ Sbjct: 1005 VADDTIEAKVVELQDRKRRLVSKVVD 1030 >gi|55822225|ref|YP_140666.1| ATP-dependent RNA helicase [Streptococcus thermophilus CNRZ1066] gi|55738210|gb|AAV61851.1| ATP-dependent RNA helicase [Streptococcus thermophilus CNRZ1066] Length = 1031 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 23/206 (11%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ L E S + Q+ + + + K+ +L ++ Sbjct: 815 QQMQQGLISASDQEINRRKVEILSGITRLRQICDTPALFMDYAG----DSGKLDSLRDLL 870 Query: 64 --EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 K + +++ F L + D + +N+G Sbjct: 871 SQIKESDHRVLIFSQFRGMLDITEELLQELGISSYKLTGSTPSDSRQEMTRAFNQGSRDA 930 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ ++R + G K+ V V+ LI Sbjct: 931 FLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQKQNVEVFRLI 984 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ K + +L+ Sbjct: 985 TRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|254832046|ref|ZP_05236701.1| hypothetical protein Lmon1_11855 [Listeria monocytogenes 10403S] Length = 1072 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 73/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 908 TARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + + K + D L+ Sbjct: 1022 KGTIEERIFELQKKKQALVDELIQ 1045 >gi|315038431|ref|YP_004031999.1| Non-specific serine/threonine protein kinase [Lactobacillus amylovorus GRL 1112] gi|312276564|gb|ADQ59204.1| Non-specific serine/threonine protein kinase [Lactobacillus amylovorus GRL 1112] Length = 1180 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 86/226 (38%), Gaps = 34/226 (15%) Query: 3 QYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 YH ++ L G++ F ++ K ++ + H +K+K Sbjct: 959 LYHLQMNKIIAQLNGQDDDDFKKSRFQILAQITKLREICCDPHLLYDNYH---GKSDKLK 1015 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +I+ N I++ F S L +K IQ +N Sbjct: 1016 TTIDLIKSNLENGHKILLFSQFTSMLDILQEKLAKLKVPTFMLTGSTPKEKRQEDIQHFN 1075 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K P + + G G+NL ++++ + WW++ E R + G K + Sbjct: 1076 SLKQPGVFLISLKAGGTGINLTS-ADVVIHYDPWWNIAA-----ENQATDRAHRIGQKNS 1129 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-------ALKKETI 203 V +Y ++ Q+T++E +++ + K+ + +LN A+ +E + Sbjct: 1130 VKIYKMVTQDTVEERIIKLQQKKAELAQAILNNKDMANAAMNRENL 1175 >gi|307704453|ref|ZP_07641363.1| bacterial SNF2 helicase associated family protein [Streptococcus mitis SK597] gi|307621973|gb|EFO01000.1| bacterial SNF2 helicase associated family protein [Streptococcus mitis SK597] Length = 1032 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 72/211 (34%), Gaps = 22/211 (10%) Query: 5 HKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + + L +Q S ++ Q+ + + E+ K+ +L ++ Sbjct: 813 QQMRDRLAQVSVQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDLL 869 Query: 64 EK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 + +++ F L + + +N+G+ Sbjct: 870 VQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERDA 929 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G + V VY L+ Sbjct: 930 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRLV 983 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + TI+E + + K + +L+ + Sbjct: 984 TKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|149013295|ref|ZP_01834053.1| Snf2 family protein, putative [Streptococcus pneumoniae SP19-BS75] gi|182684567|ref|YP_001836314.1| snf2 family protein [Streptococcus pneumoniae CGSP14] gi|303253977|ref|ZP_07340097.1| snf2 family protein [Streptococcus pneumoniae BS455] gi|303258546|ref|ZP_07344526.1| snf2 family protein [Streptococcus pneumoniae SP-BS293] gi|303262636|ref|ZP_07348576.1| snf2 family protein [Streptococcus pneumoniae SP14-BS292] gi|303263575|ref|ZP_07349497.1| snf2 family protein [Streptococcus pneumoniae BS397] gi|303266981|ref|ZP_07352856.1| snf2 family protein [Streptococcus pneumoniae BS457] gi|303269746|ref|ZP_07355498.1| snf2 family protein [Streptococcus pneumoniae BS458] gi|147762960|gb|EDK69906.1| Snf2 family protein, putative [Streptococcus pneumoniae SP19-BS75] gi|182629901|gb|ACB90849.1| snf2 family protein [Streptococcus pneumoniae CGSP14] gi|301802325|emb|CBW35079.1| SNF2 protein [Streptococcus pneumoniae INV200] gi|302599065|gb|EFL66091.1| snf2 family protein [Streptococcus pneumoniae BS455] gi|302636192|gb|EFL66687.1| snf2 family protein [Streptococcus pneumoniae SP14-BS292] gi|302640047|gb|EFL70502.1| snf2 family protein [Streptococcus pneumoniae SP-BS293] gi|302640716|gb|EFL71111.1| snf2 family protein [Streptococcus pneumoniae BS458] gi|302643498|gb|EFL73770.1| snf2 family protein [Streptococcus pneumoniae BS457] gi|302646613|gb|EFL76838.1| snf2 family protein [Streptococcus pneumoniae BS397] Length = 1048 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 21/192 (10%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNS 79 + + Q+ N + E+ K+ +L +++ + + ++ F S Sbjct: 851 KIEILAGLTRLRQICNTPALFLEDYK---GDSGKMDSLFELLDTIREKGSRPLIFSQFTS 907 Query: 80 DLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 L DK + +N+G+ + G GLNL G Sbjct: 908 MLDLIEQELEKKEMSHFKITGQTPSDKRQEMVNLFNQGEKDCFLISLKAGGTGLNLT-GA 966 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ LWW+ + R + G + V VY LI TI+E + + +K Sbjct: 967 DTVILCDLWWNPAVEM-----QAIGRSHRLGQTKQVDVYRLITLGTIEEKIQELQESKKE 1021 Query: 190 IQDLLLNALKKE 201 + + +L + Sbjct: 1022 LFNTVLEGQESR 1033 >gi|47096999|ref|ZP_00234573.1| helicase, Snf2 family [Listeria monocytogenes str. 1/2a F6854] gi|254898188|ref|ZP_05258112.1| hypothetical protein LmonJ_00195 [Listeria monocytogenes J0161] gi|254912319|ref|ZP_05262331.1| helicase [Listeria monocytogenes J2818] gi|254936646|ref|ZP_05268343.1| helicase [Listeria monocytogenes F6900] gi|47014621|gb|EAL05580.1| helicase, Snf2 family [Listeria monocytogenes str. 1/2a F6854] gi|258609243|gb|EEW21851.1| helicase [Listeria monocytogenes F6900] gi|293590301|gb|EFF98635.1| helicase [Listeria monocytogenes J2818] Length = 1072 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 73/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 908 TARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + + K + D L+ Sbjct: 1022 KGTIEERIFELQKKKQALVDELIQ 1045 >gi|313890879|ref|ZP_07824503.1| SNF2 family N-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313120777|gb|EFR43892.1| SNF2 family N-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 1031 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 73/211 (34%), Gaps = 25/211 (11%) Query: 5 HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q E + +I S + Q+ + + E + K+++L + Sbjct: 815 RQMQ-ERIQNASDSDINRQKIEILSGITRLRQICDTPSLFMEY----QGESGKLESLRTL 869 Query: 63 I--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP 110 + K N ++ F L ++ D+ + +N G Sbjct: 870 LLQVKENGHRALIFSQFRGMLEIVEQELSSLGLGSYKITGSTPADERQEMTRAFNNGSKD 929 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + +V LWW+ ++R + G K V VY L Sbjct: 930 AFLISLKAGGVGLNLT-GADTVVLIDLWWNPAVEM-----QAISRAHRIGQKDNVEVYRL 983 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + TI+E +L K + +L+ + Sbjct: 984 ITRGTIEEKILTLQENKKNLVTTVLDGNESR 1014 >gi|258577009|ref|XP_002542686.1| hypothetical protein UREG_02202 [Uncinocarpus reesii 1704] gi|237902952|gb|EEP77353.1| hypothetical protein UREG_02202 [Uncinocarpus reesii 1704] Length = 1203 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 28/192 (14%) Query: 32 CLQLANGA--------VYYDEEKHWKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDL 81 ++ N + + V K++ ++ + + K ++ L Sbjct: 715 LRKICNHPDLPEHRTLSQKSDYNYGSGVKSGKMQVVKSLIELWKETGHKTLLFAQHRIML 774 Query: 82 ARLQKAF----------PQGRTLDK-DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 L+K G T K + E+N + I + G G+NL G Sbjct: 775 DILEKFMKSLPGFNYRRMDGNTPIKIRQSIVDEFNTDPDIHVFLLTTKVGGLGVNLT-GA 833 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ + W+ + R + G KR V +Y L+ TI+E + R K Sbjct: 834 DRVIIYDPDWNPST-----DLQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQF 888 Query: 190 IQDLLLNALKKE 201 + + +L K+ Sbjct: 889 LTNKILKDPKQR 900 >gi|311070141|ref|YP_003975064.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus atrophaeus 1942] gi|310870658|gb|ADP34133.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus atrophaeus 1942] Length = 924 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 77/212 (36%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ + + S + Q+ + Y +E + + K++ Sbjct: 694 LYEQLVKDTFEHMSSLTGMQRKALILSMLGRLKQICDHPALYLKEDQTELLAGRSVKLEK 753 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWN 105 L ++ + ++ + ++ + + ++++ Sbjct: 754 LLELMTAIRDQNESCLIFTQYIQMGNMMKKLLEKTFGEPVQFLNGSLSKQDRDSLVEKFQ 813 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + P L + G GLNL N ++ + WW+ +E R + G +R V Sbjct: 814 KKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQERFV 867 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +I TI+E + L TK T+ D ++ + Sbjct: 868 HVHKMITTGTIEEKIDMMLETKQTLNDQIIQS 899 >gi|215487691|ref|YP_002330122.1| predicted helicase [Escherichia coli O127:H6 str. E2348/69] gi|312967725|ref|ZP_07781940.1| putative helicase [Escherichia coli 2362-75] gi|215265763|emb|CAS10170.1| predicted helicase [Escherichia coli O127:H6 str. E2348/69] gi|312287922|gb|EFR15827.1| putative helicase [Escherichia coli 2362-75] Length = 1149 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 76/215 (35%), Gaps = 23/215 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y RE ++GE+ + Q+ N +Y + K K + L Sbjct: 922 IYASVVREGMQVIRGESDAFQRQGLVLQMIMALKQVCNHPAHYLKNKQMDAALSGKAQLL 981 Query: 60 EVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCTIQEWN 105 +++ + +++ F LQ +D + N Sbjct: 982 LDLLDSIEETTEKVLIFTQFKEMGELLQSWLTARYGEQPLFLHGGLSRKKRDEQVERFQN 1041 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNL + ++ + LWW+ +E R + G +R V Sbjct: 1042 DRSVRHFILSLKAGGTGLNLTA-ASQVIHYDLWWNPA-----VEAQATDRAYRIGQQRNV 1095 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ L+ + T +E + +R K + ++ + + ++ Sbjct: 1096 QVHRLLTRETFEERINDMIRNKKALAEMTVGSGEQ 1130 >gi|312438077|gb|ADQ77148.1| SNF2 domain protein [Staphylococcus aureus subsp. aureus TCH60] Length = 455 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y +++ + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDDEDVRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G ++++I NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIITDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARI 451 >gi|282911093|ref|ZP_06318895.1| SNF2 family protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282324788|gb|EFB55098.1| SNF2 family protein [Staphylococcus aureus subsp. aureus WBG10049] Length = 455 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 8/202 (3%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + ++ + + + A N AS + K LQL+NGAV Y +++ + +HD+K+ LE Sbjct: 257 KVYEELEKNYILESEEEGTVVAQNGASLSQKLLQLSNGAV-YTDDEDVRLIHDKKLDKLE 315 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 IIE++ PI++ Y+F D R+ + F + T +D + WN G I LL AHPAS G Sbjct: 316 EIIEESQGQPILLFYNFKHDKERILQRFKEATT-LEDSNYKERWNSGDIKLLIAHPASAG 374 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNLQ GG+I+V+F L W LE +Q R + G ++++I NTID+ V Sbjct: 375 HGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHIITDNTIDQRV 429 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K Q+ L+ A+K Sbjct: 430 YKALQNKELTQEELMKAIKARI 451 >gi|256850404|ref|ZP_05555832.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus MV-1A-US] gi|262046447|ref|ZP_06019409.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus MV-3A-US] gi|312977470|ref|ZP_07789218.1| Snf2 family protein [Lactobacillus crispatus CTV-05] gi|256712801|gb|EEU27794.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus MV-1A-US] gi|260573318|gb|EEX29876.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus MV-3A-US] gi|310895901|gb|EFQ44967.1| Snf2 family protein [Lactobacillus crispatus CTV-05] Length = 1131 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 82/212 (38%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y+ +++ L G+ F ++ K ++ E H K+ Sbjct: 910 LYNMQTQKIIAQLNGQGDEDFKRSRFQILAQITKLREICCDPHLLYENYH---GKSNKLI 966 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 A +I+ N I++ F + L K +Q++N Sbjct: 967 ATIELIKNNLANGHKILLFSQFTAMLDILHENLARLRLPLFTITGSTPKTKRQEQVQKFN 1026 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + + G G+NL G ++++ + WW+L E+ R + G K + Sbjct: 1027 QMAQPGVFLISLKAGGTGINLT-GADVVIHYDPWWNLAA-----EKQATDRAHRIGQKHS 1080 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y ++ +++I+E ++ + K+ + D++L Sbjct: 1081 VKIYKMVTEDSIEERIIALQQKKAELADIILQ 1112 >gi|171687146|ref|XP_001908514.1| hypothetical protein [Podospora anserina S mat+] gi|170943534|emb|CAP69187.1| unnamed protein product [Podospora anserina S mat+] Length = 1197 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 69/224 (30%), Gaps = 33/224 (14%) Query: 2 KQYHKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------H 52 + Y F + E+ L ++ N + + Sbjct: 695 EAYELFLKSDEMASILDRSRQS----LYGIDILRKICNHPDLLNPRLKNEPGYLWGSVEK 750 Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPC 99 K+ ++ ++ K ++ L + + Sbjct: 751 SGKMAVVQSLLPMWKRLGHKTLLFSQGTQMLDIIEAFVQRLDDVRYLRMDGKTPIKQRQT 810 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++N + + + G G+NL G N ++ F W+ + R + Sbjct: 811 LVDQFNNDPSLDVFLLTTKVGGLGVNLT-GANRVIIFDPDWNPST-----DVQARERAWR 864 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G KR V +Y L+ TI+E + R K + + +L K++T Sbjct: 865 LGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQT 908 >gi|284802036|ref|YP_003413901.1| hypothetical protein LM5578_1791 [Listeria monocytogenes 08-5578] gi|284995178|ref|YP_003416946.1| hypothetical protein LM5923_1743 [Listeria monocytogenes 08-5923] gi|284057598|gb|ADB68539.1| hypothetical protein LM5578_1791 [Listeria monocytogenes 08-5578] gi|284060645|gb|ADB71584.1| hypothetical protein LM5923_1743 [Listeria monocytogenes 08-5923] Length = 1072 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 73/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 908 TARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + + K + D L+ Sbjct: 1022 KGTIEERIFELQKKKQALVDELIQ 1045 >gi|16803684|ref|NP_465169.1| hypothetical protein lmo1644 [Listeria monocytogenes EGD-e] gi|16411080|emb|CAC99722.1| lmo1644 [Listeria monocytogenes EGD-e] Length = 1072 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 73/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 908 TARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + + K + D L+ Sbjct: 1022 KGTIEERIFELQKKKQALVDELIQ 1045 >gi|301059981|ref|ZP_07200855.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] gi|300445860|gb|EFK09751.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] Length = 1002 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 83/215 (38%), Gaps = 24/215 (11%) Query: 1 MKQYHKFQ----RELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYD-EEKHWKEVHD 53 +K Y +L +L+ ++I + S Q+ N + ++ Sbjct: 758 VKLYRDVISSRGHDLVHNLREPRKSIPYIHIFSLLNLLKQICNHPALINGNIDDYQNFQS 817 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQE 103 K + ++E+A + +++ F + + ++K Q T I+ Sbjct: 818 GKWDLFKELLEEALASGQKVVIYSQFLNMIDIMEKYLAQTGTNFVSLTGRTTNREKIIER 877 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + + G G++L ++++ + WW+ + E R + G K Sbjct: 878 FNEDSECRVFVGSLKAGGVGIDLVA-ASVVIHYDRWWNAAK-----EDQATDRVHRIGQK 931 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ L+ + T++E + + K + D ++ Sbjct: 932 KGVQVFKLVTEGTLEEKIAAIIAKKRNLMDSVVEE 966 >gi|170739234|ref|YP_001767889.1| non-specific serine/threonine protein kinase [Methylobacterium sp. 4-46] gi|168193508|gb|ACA15455.1| Non-specific serine/threonine protein kinase [Methylobacterium sp. 4-46] Length = 1120 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 77/227 (33%), Gaps = 32/227 (14%) Query: 3 QYHKFQ-------RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 Y + R + +G +K Q K K Sbjct: 898 LYESIRLAMHARVRAAIAE-KGFARSRIVILDALLKLRQACCDPRLLKLAPPPKAG-SAK 955 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWN 105 + L+ ++E A ++V F S L ++ +T ++ + Sbjct: 956 LDRLDELLESLIAEGRRVLVFSQFTSMLDLIKPRLTLAKTPCLELTGRSRDRAEVVRRFE 1015 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ P+ + G GLNL + ++ + WW+ +E + R + G + V Sbjct: 1016 AGEAPVFLISLKAGGTGLNLVA-ADTVILYDPWWNPA-----VEAQAIDRAHRIGQDKPV 1069 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-------ALKKETIHV 205 FV+ L+A TI+E + K + D L + A+ E + + Sbjct: 1070 FVHKLVASRTIEEKMGVLKERKGALADSLFDHDGAPTSAMTAEDLDL 1116 >gi|55820334|ref|YP_138776.1| ATP-dependent RNA helicase [Streptococcus thermophilus LMG 18311] gi|55736319|gb|AAV59961.1| ATP-dependent RNA helicase [Streptococcus thermophilus LMG 18311] Length = 1031 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 23/206 (11%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ L E S + Q+ + + + K+ +L ++ Sbjct: 815 QQMQQGLISASDQEINRRKVEILSGITRLRQICDTPALFMDYAG----DSGKLDSLRDLL 870 Query: 64 --EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 K + +++ F L + D + +N+G Sbjct: 871 SQIKESDHRVLIFSQFRGMLDITEELLQELGISSYKLTGSTPSDSRQEMTRAFNQGSRDA 930 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ ++R + G K+ V V+ LI Sbjct: 931 FLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQKQNVEVFRLI 984 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ K + +L+ Sbjct: 985 TRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|1763712|emb|CAB05939.1| ywqA [Bacillus subtilis subsp. subtilis str. 168] Length = 867 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ + + S + Q+ + Y +E+ + + K++ Sbjct: 639 LYEQLVKDTFDHMTSLTGMQRKALILSMLGRLKQICDHPALYLKEEQTELLAGRSVKLEK 698 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWN 105 L ++ +A ++ + ++ + + + ++++ Sbjct: 699 LLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDTLVEKFQ 758 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + P L + G GLNL N ++ + WW+ +E R + G +R V Sbjct: 759 RKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQERFV 812 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +I TI+E + L +K T+ D ++ + Sbjct: 813 HVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 844 >gi|152964981|ref|YP_001360765.1| Non-specific serine/threonine protein kinase [Kineococcus radiotolerans SRS30216] gi|151359498|gb|ABS02501.1| Non-specific serine/threonine protein kinase [Kineococcus radiotolerans SRS30216] Length = 1029 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 75/222 (33%), Gaps = 30/222 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFN------SASKTVKCLQLANGAVYYDEEK----HWKEVH 52 Y + +L L E+ + + + Q+ N +Y + H Sbjct: 791 LYRQVVDDLVRRLAEEDPDPRGPARRGLVLATLTRLKQICNHPAHYLADASGVLHRGRHR 850 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPC 99 K++ L+ I+ +A ++ F L G Sbjct: 851 SGKLELLDDIVTSARAEGEKVLCFTQFAEFGHLLGPHLAERTGEPVPFLHGGVPRRARDA 910 Query: 100 TIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E++ P ++ + G GLNL N +V WW+ +E R + Sbjct: 911 MVAEFSSADGPGVMLLSLRAGGTGLNLTA-ANHVVHVDRWWNPA-----VEDQATDRAYR 964 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G R+V V +++ T++E V + K + D ++ + + Sbjct: 965 IGQHRSVQVRKMVSVGTVEERVDAVITRKRGLADAVVGSGEG 1006 >gi|46111317|ref|XP_382716.1| hypothetical protein FG02540.1 [Gibberella zeae PH-1] Length = 1163 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 39/226 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWK------- 49 K Y F ++ + + A S ++ N D+ K Sbjct: 675 KAYETF-------IKSDEVSAILNRRRQSLYGIDILRKICNHPDLLDKSLGKKAGYDFGN 727 Query: 50 EVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDK 96 K++ + +++K N ++ L ++K + +D+ Sbjct: 728 PKLSAKLQLTKDLLQKVMIPNGHKTLLFSQGKQMLDIIEKCIGECGISYVRMDGETPVDR 787 Query: 97 DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++NE I + + G G NL G + ++ F W+ + R Sbjct: 788 RQTMIDKFNESPDIHVFLMTTRTGGLGTNLT-GADRIIIFDPDWNPST-----DLQARER 841 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K+ V +Y L+ + TI+E + R K + + +L K+ Sbjct: 842 AWRLGQKKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQR 887 >gi|149007570|ref|ZP_01831205.1| Snf2 family protein [Streptococcus pneumoniae SP18-BS74] gi|147760929|gb|EDK67899.1| Snf2 family protein [Streptococcus pneumoniae SP18-BS74] Length = 1032 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEKANA--APIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGRHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|297625268|ref|YP_003687031.1| Helicase (SNF2-related protein) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921033|emb|CBL55571.1| Helicase (SNF2-related protein) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 1132 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 65/210 (30%), Gaps = 22/210 (10%) Query: 2 KQYH-KFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + Q E L + + QL+ DE + KI Sbjct: 913 RIYDRQLQAERMNTLGLLGDARHHRIEILAALTRLRQLSLAPGLVDE--KMLNIGSAKID 970 Query: 58 ALEVIIEKANA--APIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEG 107 L + +V F S L ++ +Q + +G Sbjct: 971 TLVEHLRALAGENHRALVFSQFTSFLHLVRDRLTTEGIEWEYLDGRTRHRDERVQRFKDG 1030 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + G GL L + + WW+ E + R + G + V V Sbjct: 1031 NATAFLISLKAGGFGLTLTE-ADYVYVLDPWWNPAA-----ENQAIDRTHRIGQDKQVMV 1084 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y +++ NTI+E V+ + K + D ++ Sbjct: 1085 YRMVSTNTIEEKVVALQQRKRDLFDQVVGD 1114 >gi|229819960|ref|YP_002881486.1| Non-specific serine/threonine protein kinase [Beutenbergia cavernae DSM 12333] gi|229565873|gb|ACQ79724.1| Non-specific serine/threonine protein kinase [Beutenbergia cavernae DSM 12333] Length = 1118 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 74/209 (35%), Gaps = 23/209 (11%) Query: 2 KQYHKF---QRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + +R+ L + S + QLA D K+ Sbjct: 881 RVYDRHLHRERQRVLRLADDLDRNRVEVLSALTRLRQLAIDPTLVD---ADSAAPGSKLD 937 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEG 107 AL ++ +A ++V F LA + T + I+ + EG Sbjct: 938 ALLPLLTEAAAEGHRVLVFSQFTRYLAMIGARLDAAGLAYSYLDGTTRRRDAVIRGFAEG 997 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + V WW+ +Q ++R + G + V V Sbjct: 998 TDPVFLISLKAGGVGLNL-AMADYAVLADPWWNPATEEQAVDR-----AHRIGQTKPVMV 1051 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y L+A +TI+E V+ K + +L Sbjct: 1052 YRLVATDTIEEKVMALQGAKRALVAGVLG 1080 >gi|332074276|gb|EGI84753.1| helicase conserved C-terminal domain protein [Streptococcus pneumoniae GA17545] Length = 1032 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEKANA--APIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGRHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|330808510|ref|YP_004352972.1| Putative non-specific serine/threonine protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376618|gb|AEA67968.1| Putative non-specific serine/threonine protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 897 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 75/212 (35%), Gaps = 23/212 (10%) Query: 3 QYHKFQ----RELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK-HWKEVHDEK 55 Y + +++ ++ + + +K Q+ ++ + K Sbjct: 665 VYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLINDATLPARGSTSGK 724 Query: 56 IK--ALEVIIEKANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWN 105 + + +++ F S LA +++ ++E+ Sbjct: 725 LDSLMEMLEELFEEGRRVLLFSQFTSMLALIEEELKKRGVEYAILTGQTRDRRTPVKEFQ 784 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 GK + + G GLNL + ++ + WW+ E R + G ++ V Sbjct: 785 SGKRQIFLISLKAGGVGLNLTE-ADTVIHYDPWWNPAT-----ENQATDRAYRIGQEKPV 838 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 FVY LIA+ T++E + + KS + +L+ Sbjct: 839 FVYKLIARGTVEEKIQLLQKEKSDLAAGVLDG 870 >gi|223935408|ref|ZP_03627325.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] gi|223895818|gb|EEF62262.1| Non-specific serine/threonine protein kinase [bacterium Ellin514] Length = 1184 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 22/212 (10%) Query: 3 QYH-KFQR--ELYCDLQGENI---EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + +R ++ ++ + E F+ + ++ Q++ E + + Sbjct: 962 LYRAELKRAQQMLLRVKTQKEFAKERFHFLTSLLRLRQISCHPRLVKPESRASSAKVDAL 1021 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEG 107 + + ++V F L + G T ++ + Sbjct: 1022 FEQLEPLVE-EGQKVLVFSQFVDMLDILRTDIEAKGWPLFYLAGDTENRGELVQRFQATE 1080 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL + +V F WW+ +E + R + G R V Sbjct: 1081 GAAVFLISLKAGGFGLNLTA-ASYVVLFDPWWNPA-----VENQAIDRTHRIGQSRNVIA 1134 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y L+ + +I+E + Q + KS++ D +L K Sbjct: 1135 YRLLIKESIEEKIRQLQKQKSSLADDVLGEEK 1166 >gi|162450775|ref|YP_001613142.1| Snf2/Rad54 family helicase [Sorangium cellulosum 'So ce 56'] gi|161161357|emb|CAN92662.1| helicase, SNF2/RAD54 family [Sorangium cellulosum 'So ce 56'] Length = 1031 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 69/219 (31%), Gaps = 26/219 (11%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVY------YDEEKHWKEVH 52 + Y + R+ + E + ++ Q A + Sbjct: 805 ELYDAVRAATRKDVVEKLAEGASVMAALEALLRLRQAACHPALIPGSSAGGAAPAARSAP 864 Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQ 102 K+ L +E+ + +V + S L ++ + Sbjct: 865 SSKVTRLIEALEECVADGHKALVFSQWTSLLDLVEPHLGAAGIPWSRLDGGTRDRAGVVN 924 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+ G P++ + G GLNL + + WW+ +E R + G Sbjct: 925 EFQSPGGPPVMLISLKAGGTGLNLTA-ADHVFLLDPWWNPA-----VEDQAADRAHRIGQ 978 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V V+ L+A++T++E +L K I L + Sbjct: 979 HRPVMVHRLVAKDTVEEGILALQERKRAIAGAALGEADR 1017 >gi|300071885|gb|ADJ61285.1| SWI/SNF family helicase [Lactococcus lactis subsp. cremoris NZ9000] Length = 1031 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 23/206 (11%) Query: 6 KFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++ ++ + + + Q+ N + ++ K++ L ++ Sbjct: 817 ELMQKQVLEMDNAALSRSRIEILAGITRLRQICNTPALFMDDYK---GSSGKLERLRELL 873 Query: 64 --EKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 K + ++ F + + +Q +N G Sbjct: 874 AQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDA 933 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL ++++ LWW+ +E + R + G K V V LI Sbjct: 934 FLVSLKAGGVGLNLTS-ADVVILVDLWWNPA-----VEEQAIARAHRMGQKNTVEVIRLI 987 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 Q TI+E +++ K + +L Sbjct: 988 TQGTIEEKIMEIQERKKDLIANVLEG 1013 >gi|256419374|ref|YP_003120027.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] gi|256034282|gb|ACU57826.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] Length = 1354 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 71/211 (33%), Gaps = 26/211 (12%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + +++ + + N+ ++ K A + K+ Sbjct: 1132 YEALRLKAVENIKRYSKDKTSKHNLNTLTEIGKLRMAAC---NTQMIDPEIRIPSSKLAV 1188 Query: 59 LEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 I+++ N +V + +L + ++E+ Sbjct: 1189 FIEIVKELIDNNHRALVFSQYVKHLDLVRLALDELNVSYCYLDGSTPIPVRERVVKEFQA 1248 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G L + G GLNL + ++ WW+ IE R + G R V Sbjct: 1249 GAGSLFLISLKAGGTGLNLTA-ADYVIHLDPWWNPA-----IEEQASDRAYRIGQTRPVT 1302 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y L+ ++TI+E ++ +K + D LL Sbjct: 1303 IYRLVTRHTIEEKIIALHNSKRDLADRLLEG 1333 >gi|330443927|ref|YP_004376913.1| helicase, swi/snf2 family [Chlamydophila pecorum E58] gi|328807037|gb|AEB41210.1| helicase, swi/snf2 family [Chlamydophila pecorum E58] Length = 1167 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 959 LVKQEGFERIHIHILATLTRLKQICCHPAIFA-KDSPEPGDSAKYDMLMDLLSSLVDSGH 1017 Query: 70 PIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + L+ ++ + G T ++ + + + + + G Sbjct: 1018 KTVVFSQYTKMLSIMKKDLEIRGVPFVYLDGSTKNRLELVNKFNEDPNLLVFLVSLKAGG 1077 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1078 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQSRSVSSYKLVTLNTIEEKI 1131 Query: 181 LQRLRTKSTIQDLLLNA 197 L K ++ ++N+ Sbjct: 1132 LTLQNRKKSLVKKVINS 1148 >gi|227503822|ref|ZP_03933871.1| helicase [Corynebacterium striatum ATCC 6940] gi|227199646|gb|EEI79694.1| helicase [Corynebacterium striatum ATCC 6940] Length = 1013 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 76/218 (34%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y ++ L+ + + Q+ N +Y + + K+ Sbjct: 782 LYKALVDDVQKALETREGMSRRGLVLASLTRIKQICNHPAHYLGDGSSVTLKGKHRSGKV 841 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 + L I+++ + I+V + + L R G T +K +++ Sbjct: 842 EELMRIVDQAIESEERILVFTQYKAFGDILQPYLTQQLGREIPFLHGGVTKNKRDQMVED 901 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + P + + G GLNL +I+V WW+ +E R + G + Sbjct: 902 FQSPDGPPAMILSLKAGGTGLNLTA-ASIVVHMDRWWNPA-----VENQATDRAFRIGQQ 955 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V VY +I T++E + L K + ++ + Sbjct: 956 RNVQVYKMITAGTLEESIQDILDGKMHLAGAVVGEGEG 993 >gi|322517503|ref|ZP_08070375.1| Snf2 family protein [Streptococcus vestibularis ATCC 49124] gi|322123879|gb|EFX95442.1| Snf2 family protein [Streptococcus vestibularis ATCC 49124] Length = 1027 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 73/211 (34%), Gaps = 25/211 (11%) Query: 5 HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q+ L + I S + Q+ + + + K+ +L + Sbjct: 811 QQMQQGLISA-SDQEINRHKVEILSGITRLRQICDTPALFMDYAG----DSGKLDSLRDL 865 Query: 63 I--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP 110 + K + +++ F L + D + +N+G Sbjct: 866 LSQIKESDHRVLIFSQFRGMLDITEELLQEVGISSYKLTGSTPSDSRQEMTKAFNQGSRD 925 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ ++R + G ++ V V+ L Sbjct: 926 AFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQEQNVEVFRL 979 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + TI+E +L+ K + +L+ + Sbjct: 980 ITRGTIEEKILELQEGKKNLVTTVLDGNESR 1010 >gi|227878641|ref|ZP_03996558.1| Snf2 family helicase [Lactobacillus crispatus JV-V01] gi|256843239|ref|ZP_05548727.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus 125-2-CHN] gi|227861761|gb|EEJ69363.1| Snf2 family helicase [Lactobacillus crispatus JV-V01] gi|256614659|gb|EEU19860.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus 125-2-CHN] Length = 1175 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 82/212 (38%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y+ +++ L G+ F ++ K ++ E H K+ Sbjct: 954 LYNMQTQKIIAQLNGQGDEDFKRSRFQILAQITKLREICCDPHLLYENYH---GKSNKLI 1010 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 A +I+ N I++ F + L K +Q++N Sbjct: 1011 ATIELIKNNLANGHKILLFSQFTAMLDILHENLARLRLPLFTITGSTPKTKRQEQVQKFN 1070 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + + G G+NL G ++++ + WW+L E+ R + G K + Sbjct: 1071 QMAQPGVFLISLKAGGTGINLT-GADVVIHYDPWWNLAA-----EKQATDRAHRIGQKHS 1124 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y ++ +++I+E ++ + K+ + D++L Sbjct: 1125 VKIYKMVTEDSIEERIIALQQKKAELADIILQ 1156 >gi|312864084|ref|ZP_07724320.1| SNF2 family N-terminal domain protein [Streptococcus vestibularis F0396] gi|311100497|gb|EFQ58704.1| SNF2 family N-terminal domain protein [Streptococcus vestibularis F0396] Length = 1031 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 73/211 (34%), Gaps = 25/211 (11%) Query: 5 HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q+ L + I S + Q+ + + + K+ +L + Sbjct: 815 QQMQQGLISA-SDQEINRHKVEILSGITRLRQICDTPALFMDYAG----DSGKLDSLRDL 869 Query: 63 I--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP 110 + K + +++ F L + D + +N+G Sbjct: 870 LSQIKESDHRVLIFSQFRGMLDITEELLQEVGISSYKLTGSTPSDSRQEMTKAFNQGSRD 929 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ ++R + G ++ V V+ L Sbjct: 930 AFLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQEQNVEVFRL 983 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + TI+E +L+ K + +L+ + Sbjct: 984 ITRGTIEEKILELQEGKKNLVTTVLDGNESR 1014 >gi|312220152|emb|CBY00094.1| similar to DNA repair protein Rhp26/Rad26 [Leptosphaeria maculans] Length = 1224 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 28/210 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVHDEKIKALEVII-- 63 D++ N ++ N + + K++ ++ ++ Sbjct: 709 DMKSITDGKRNMLFGVDYLRKVCNHPDLTEHKILSKKPGYDYGAPNRSGKMQVVKELLSL 768 Query: 64 EKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDK-DPCTIQEWNE-GKIPL 111 K ++ F S L + G T K + E+N + + Sbjct: 769 WKKGGHKTLLFAQHRIMLDILQKFVSHLPGINWRRMDGETPIKERQNLVDEFNNNPDLDV 828 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 G G+NL G N ++ + W+ + R + G KR V +Y L+ Sbjct: 829 FLLTTKVGGLGVNLT-GANRVIIYDPDWNPST-----DIQARERSWRLGQKREVEIYRLM 882 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + R K + + +L K+ Sbjct: 883 SAGTIEEKIYHRQIFKQFLTNKVLKDPKQR 912 >gi|293380595|ref|ZP_06626650.1| SNF2 family N-terminal domain protein [Lactobacillus crispatus 214-1] gi|290922842|gb|EFD99789.1| SNF2 family N-terminal domain protein [Lactobacillus crispatus 214-1] Length = 1175 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 82/212 (38%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y+ +++ L G+ F ++ K ++ E H K+ Sbjct: 954 LYNMQTQKIIAQLNGQGDEDFKRSRFQILAQITKLREICCDPHLLYENYH---GKSNKLI 1010 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 A +I+ N I++ F + L K +Q++N Sbjct: 1011 ATIELIKNNLANGHKILLFSQFTAMLDILHENLARLRLPLFTITGSTPKTKRQEQVQKFN 1070 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + + G G+NL G ++++ + WW+L E+ R + G K + Sbjct: 1071 QMAQPGVFLISLKAGGTGINLT-GADVVIHYDPWWNLAA-----EKQATDRAHRIGQKHS 1124 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y ++ +++I+E ++ + K+ + D++L Sbjct: 1125 VKIYKMVTEDSIEERIIALQQKKAELADIILQ 1156 >gi|116512988|ref|YP_811895.1| SNF2 family DNA/RNA helicase [Lactococcus lactis subsp. cremoris SK11] gi|116108642|gb|ABJ73782.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactococcus lactis subsp. cremoris SK11] Length = 1034 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 23/206 (11%) Query: 6 KFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++ ++ + + + Q+ N + ++ K++ L ++ Sbjct: 820 ELMQKQVLEMDNAALSRSRIEILAGITRLRQICNTPALFMDDYK---GSSGKLERLRELL 876 Query: 64 --EKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 K + ++ F + + +Q +N G Sbjct: 877 AQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDA 936 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL ++++ LWW+ +E + R + G K V V LI Sbjct: 937 FLVSLKAGGVGLNLTS-ADVVILVDLWWNPA-----VEEQAIARAHRMGQKNTVEVIRLI 990 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 Q TI+E +++ K + +L Sbjct: 991 TQGTIEEKIMEIQERKKDLIANVLEG 1016 >gi|23099744|ref|NP_693210.1| helicase [Oceanobacillus iheyensis HTE831] gi|22777974|dbj|BAC14245.1| helicase (swi/snf family) [Oceanobacillus iheyensis HTE831] Length = 1051 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 80/206 (38%), Gaps = 23/206 (11%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + + L E I + + Q+ + + + K K++ L+ +I Sbjct: 832 KLRHPSFKHLDKETIRKNRIKILAGITRLRQICCHPSLFVRKYNDK---SAKLERLKQLI 888 Query: 64 EKAN--AAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKIPL 111 + A+ +++ F S L + ++ + +N+G + Sbjct: 889 KDASRANKRLLIFSQFTSMLQLIGKELRNKDILYYYIDGETPAEERVEICRAFNQGNREV 948 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + +WW+ +E + R + G + V V L+ Sbjct: 949 CLISLKAGGTGLNL-VGADTVILYDVWWNPA-----VEEQAIDRAHRIGQQSEVTVIRLL 1002 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ TI+E + + R K + + L+N Sbjct: 1003 SEGTIEEKMYELQRKKRELMNYLVNG 1028 >gi|319946443|ref|ZP_08020680.1| Snf2 family protein [Streptococcus australis ATCC 700641] gi|319747411|gb|EFV99667.1| Snf2 family protein [Streptococcus australis ATCC 700641] Length = 1031 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 77/210 (36%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E N S ++ Q+ + + E+ + K+ +L ++ Sbjct: 814 KQMQDRILSSSEEELNRSKIEILSGLMRLRQICDTPSLFLEDYTGE---SGKLDSLRELL 870 Query: 64 EKANA--APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 E+ +++ F L ++ ++ +N G+ Sbjct: 871 EQIKDGNQRVLIFSQFRGMLDIIEKELDALRMTSFKITGSTPANERQDMTNAFNSGQGDA 930 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G + V VY +I Sbjct: 931 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEDQAIGRAHRMGQDKNVEVYRMI 984 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + Sbjct: 985 TRGTIEEKIQELQTSKRHLVSTILDGTETR 1014 >gi|325105763|ref|YP_004275417.1| SNF2-related protein [Pedobacter saltans DSM 12145] gi|324974611|gb|ADY53595.1| SNF2-related protein [Pedobacter saltans DSM 12145] Length = 964 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 74/207 (35%), Gaps = 22/207 (10%) Query: 4 YHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y K + E +L K Q+AN V + E + + Sbjct: 745 YEKTKSEYRNELLKSIENGEFSKSPVQMLQGLTKLRQIANHPVLINHEYEGESSKFTDVI 804 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR--------TLDKDPCTIQEW-NEGK 108 + +A ++V F L + F + + + ++E+ N+ Sbjct: 805 YKLQSVIEA-GHKVLVFSQFVKQLDLYRNYFDKNHIAYSYLDGSTQQRGKVVEEFKNDKN 863 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I + + G GLNL + + WW+ QQ I+R + G + VF+Y Sbjct: 864 IQVFLISIKAGGVGLNLTE-ADYVFILDPWWNPAIEQQAIDR-----SHRIGQTKNVFIY 917 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 I ++T++E +L K T+ L+ Sbjct: 918 KFITKDTVEEKILALQNRKLTVAKSLI 944 >gi|125625080|ref|YP_001033563.1| SWI/SNF family helicase [Lactococcus lactis subsp. cremoris MG1363] gi|124493888|emb|CAL98882.1| SWI/SNF family helicase [Lactococcus lactis subsp. cremoris MG1363] Length = 1034 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 23/206 (11%) Query: 6 KFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++ ++ + + + Q+ N + ++ K++ L ++ Sbjct: 820 ELMQKQVLEMDNAALSRSRIEILAGITRLRQICNTPALFMDDYK---GSSGKLERLRELL 876 Query: 64 --EKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 K + ++ F + + +Q +N G Sbjct: 877 AQIKDSGHRPLIFSQFTKVFPHIEKLMEEQEMTAYKLTGSTPIKDRLSMVQAFNAGSRDA 936 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL ++++ LWW+ +E + R + G K V V LI Sbjct: 937 FLVSLKAGGVGLNLTS-ADVVILVDLWWNPA-----VEEQAIARAHRMGQKNTVEVIRLI 990 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 Q TI+E +++ K + +L Sbjct: 991 TQGTIEEKIMEIQERKKDLIANVLEG 1016 >gi|187934555|ref|YP_001886021.1| SWI/SNF family helicase [Clostridium botulinum B str. Eklund 17B] gi|187722708|gb|ACD23929.1| SWI/SNF family helicase [Clostridium botulinum B str. Eklund 17B] Length = 1086 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 77/211 (36%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y ++ ++L + S K Q+ E KI A Sbjct: 864 KTYSEYAKDLIQKKVEDDEFKNSKIEILSYITKLRQICLDPSVIMENYLGT---SGKIDA 920 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNE 106 L I++ + + I+V F S L L + + ++N+ Sbjct: 921 LLEILDHSISSGHKILVFSQFTSVLKNIGNLLKENNILFSYLDGSVSSINRMRMVDDFND 980 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL +I++ F WW+ +E R + G + V Sbjct: 981 GENNVFLVSLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQATDRAHRIGQENTVE 1034 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIAQ TI+E +++ +K + D +L Sbjct: 1035 VIKLIAQGTIEEKIVELQDSKRKLIDTILGD 1065 >gi|257094070|ref|YP_003167711.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046594|gb|ACV35782.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1400 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 72/215 (33%), Gaps = 27/215 (12%) Query: 7 FQRELYCDLQG------ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +RE D+ E FN ++ + + A + E + K++A Sbjct: 1182 LRREAASDIDATLDAAPEAQARFNILAQLTRLRRAACDPRLCNPEF---GITGAKVQAFA 1238 Query: 61 VIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGK 108 + + AN +V F L + + + + G+ Sbjct: 1239 ELASELIANGHKALVFSQFVDFLQVLREPLDESGVHYQYLDGATPAAERSRRVAAFQAGE 1298 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L + G GLNL + +V WW+ E + R + G R V VY Sbjct: 1299 GDLFLISLKAGGFGLNLTA-ADYVVITDPWWNPAA-----EDQAMGRAHRIGQLRPVTVY 1352 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L+ + T++E ++ K + D +L + + Sbjct: 1353 RLVTRGTVEERIVDLHHEKRALADSILAEGEASAL 1387 >gi|329116851|ref|ZP_08245568.1| SNF2 family N-terminal domain protein [Streptococcus parauberis NCFD 2020] gi|326907256|gb|EGE54170.1| SNF2 family N-terminal domain protein [Streptococcus parauberis NCFD 2020] Length = 1031 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 25/212 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + D+ IE S + Q+ + + + + K+ +L+ Sbjct: 816 QMQDRIRNSSDADINRRKIE---ILSGITRLRQICDTPSLFMDY----DGDSGKLDSLKT 868 Query: 62 IIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKI 109 ++ + N ++ F L + + +N G Sbjct: 869 LLVQIKENGHRALIFSQFRGMLDIAEKEMEALGLTHYKITGSTPANDRQEMTRAFNNGSK 928 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL G + +V LWW+ ++R + G K V V+ Sbjct: 929 DAFLISLKAGGVGLNLT-GADTVVLIDLWWNPAVEM-----QAISRAHRLGQKENVEVFR 982 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 LI + TI+E +L+ K + +L+ + Sbjct: 983 LITRGTIEEKILEMQEGKRNLVTTVLDGNESR 1014 >gi|321313173|ref|YP_004205460.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis BSn5] gi|320019447|gb|ADV94433.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis BSn5] Length = 922 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ + + S + Q+ + Y +E+ + + K++ Sbjct: 694 LYEQLVKDTFDHMTSLTGMQRKALILSMLGRLKQICDHPALYLKEEQTELLAGRSVKLEK 753 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWN 105 L ++ +A ++ + ++ + + + ++++ Sbjct: 754 LLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDTLVEKFQ 813 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + P L + G GLNL N ++ + WW+ +E R + G +R V Sbjct: 814 RKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQERFV 867 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +I TI+E + L +K T+ D ++ + Sbjct: 868 HVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 899 >gi|304408004|ref|ZP_07389654.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] gi|304343023|gb|EFM08867.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] Length = 966 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 65/219 (29%), Gaps = 27/219 (12%) Query: 3 QYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----WKEVHDEKI 56 Y L L E S K QL + E W K Sbjct: 731 LYENIVSGLLEHLDKEGPMRRRGLILSALTKLKQLCDHPQLLLGEGVAGDAWDIERSNKT 790 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 L +IE+ +V F + G + I+ Sbjct: 791 LRLVEMIEEIAAEGEKCLVFTQFVDMGLTLQRLLEERIGLPVPYLHGGVPKAQRDAMIER 850 Query: 104 WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + P + G GLNL N + F WW+ +E R + G Sbjct: 851 FQHSDAPGCAFVLSLKAGGTGLNLTA-ANHVFHFDRWWNPA-----VENQATDRAFRIGQ 904 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V V+ + T++E + Q + K ++ D +++ ++ Sbjct: 905 TKKVQVHKFVTLGTLEERIDQMIDRKQSLNDQIVSQSEQ 943 >gi|298714024|emb|CBJ27256.1| probable chromatin remodelling complex ATPase chain [Ectocarpus siliculosus] Length = 1563 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 69/217 (31%), Gaps = 28/217 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------EEKHWKEVHD 53 K Y + G + + ++ + N + + Sbjct: 510 KVYKGVLMRDIDTINGTSAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENC 569 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTI 101 K+ L+ ++ KA ++V D I Sbjct: 570 GKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMREYKYCRIDGNTPHDTRQDLI 629 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +E+N + + G G+NLQ + + + W+ + + R + Sbjct: 630 EEYNAPGSEKFIFLLSTRAGGLGINLQS-ADTCILYDSDWNPQA-----DLQAQDRCHRI 683 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V VY L+ ++TI+E V++R + K + +++ Sbjct: 684 GQTKTVKVYRLVTEDTIEEKVVERAQQKLKLDAMVVQ 720 >gi|114332146|ref|YP_748368.1| SNF2-related protein [Nitrosomonas eutropha C91] gi|114309160|gb|ABI60403.1| SNF2-related protein [Nitrosomonas eutropha C91] Length = 897 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 69/211 (32%), Gaps = 23/211 (10%) Query: 4 YHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + + L L G S ++ Q+ N + + WK K L Sbjct: 666 YQEAVKALARALGSSVGGIERRGLVLSFLMRFKQICNHPSQWLNDGGWKPEESGKFARLH 725 Query: 61 VIIEKAN--AAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN-E 106 I E ++V F R G + + ++ + + Sbjct: 726 EIAETVAARQEKLLVFTQFQETTAPLAAFLGSVFGREGLVLHGGTPVVRRRELVRRFQED 785 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +P + G GLNL + +V F WW+ +E R + G + V Sbjct: 786 ESVPFFVLSIKAGGSGLNLTA-ASHVVHFDRWWNPA-----VENQATDRAYRIGQHKNVL 839 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + TI+E + + + K + ++ Sbjct: 840 VHKFICRGTIEERIDELIHAKQQLVQDVVEG 870 >gi|315282593|ref|ZP_07870972.1| SNF2 family helicase [Listeria marthii FSL S4-120] gi|313613760|gb|EFR87525.1| SNF2 family helicase [Listeria marthii FSL S4-120] Length = 1072 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 73/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L+ ++ + +NEG+ + Sbjct: 908 TARENGKRILIFSQFTGMLSIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + K + D L+ Sbjct: 1022 KGTIEERIFDLQKKKQALVDELIQ 1045 >gi|295693012|ref|YP_003601622.1| non-specific serine/threonine protein kinase [Lactobacillus crispatus ST1] gi|295031118|emb|CBL50597.1| Non-specific serine/threonine protein kinase [Lactobacillus crispatus ST1] Length = 1018 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 82/212 (38%), Gaps = 27/212 (12%) Query: 3 QYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y+ +++ L G+ F ++ K ++ E H K+ Sbjct: 797 LYNMQTQKIIAQLNGQGDEDFKRSRFQILAQINKLREICCDPHLLYENYH---GKSNKLI 853 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 A +I+ N I++ F + L K +Q++N Sbjct: 854 ATIELIKNNLANGHKILLFSQFTAMLDILHENLARLRLPLFTITGSTPKTKRQEQVQKFN 913 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P + + G G+NL G ++++ + WW+L E+ R + G K + Sbjct: 914 QMAQPGVFLISLKAGGTGINLT-GADVVIHYDPWWNLAA-----EKQATDRAHRIGQKHS 967 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y ++ +++I+E ++ + K+ + D++L Sbjct: 968 VKIYKMVTEDSIEERIIALQQKKAELADIILQ 999 >gi|212536498|ref|XP_002148405.1| DNA repair protein Rhp26/Rad26, putative [Penicillium marneffei ATCC 18224] gi|210070804|gb|EEA24894.1| DNA repair protein Rhp26/Rad26, putative [Penicillium marneffei ATCC 18224] Length = 1157 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 28/220 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVHD 53 K Y +F + ++ N + Sbjct: 654 KAYEQFLNSQ--ECNSILAGRRQVLYGVDMLRKICNHPDLVTHKLFSATTGYGEPSKSGK 711 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARL-----------QKAFPQGRTLDKDPCTIQ 102 K+ + + + ++ L L + + + + Sbjct: 712 MKVVKALLELWRDTGHKTLLFAQHRIMLNILEKFVNTLSGFNYRRMDGETPIHRRQLLVD 771 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+N I + G G+NL G + ++ + W+ R + G Sbjct: 772 EFNNSPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDM-----QARERAWRLGQ 825 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 826 KREVAIYRLMTAGTIEEKIYHRQIFKQFLTNKVLKDPKQR 865 >gi|227505607|ref|ZP_03935656.1| helicase [Corynebacterium striatum ATCC 6940] gi|227197760|gb|EEI77808.1| helicase [Corynebacterium striatum ATCC 6940] Length = 1087 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 67/201 (33%), Gaps = 17/201 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKALEVII 63 + QR L + + + QLA E D L I+ Sbjct: 874 RERQRVLRLLTEDPESNRVEVLAALTRLRQLAISPTLVEPESGAPSSKLDAMTGLLRDIL 933 Query: 64 EKANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 + + +++ F S LA ++ I+ + EG + Sbjct: 934 AEEH--RVLIFSQFTSYLAEIRARLEAEGVSFSYLDGGTRDRDAAIRAFTEGNTQVFLIS 991 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL + ++ WW+ E + R + G + V VY L++ NT Sbjct: 992 LKAGGVGLNLTQ-ADYVIVADPWWNPAA-----EAQAIDRAHRIGQTQPVTVYRLVSANT 1045 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 I++ V+ TK + L Sbjct: 1046 IEDKVVALQDTKRALSSAFLE 1066 >gi|163751389|ref|ZP_02158614.1| hypothetical protein KT99_01444 [Shewanella benthica KT99] gi|161328692|gb|EDP99840.1| hypothetical protein KT99_01444 [Shewanella benthica KT99] Length = 1004 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 72/213 (33%), Gaps = 25/213 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYYDEEKHWKEV-HDEKIKA 58 Y E+ ++ S ++ Q N ++ + K++ Sbjct: 774 IYQSIVDEITTQMEQTQESQGQKVIMLSALLRLKQCCNHPAQVLQDGSEFSIERSIKLQR 833 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWN 105 L ++A N I++ F +++Q + + IQ++ Sbjct: 834 LVETCKEAIGNNESILIFSQFTEVCSQIQKILKNQLGFQTYYLHGATSRKRREQMIQQFQ 893 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 P + + G G+ L N ++ F WW+ +E R + G ++ Sbjct: 894 AEDSPPAVFILSLKAGGVGITLTK-ANHVIHFDRWWNPA-----VEDQATDRAYRIGQQK 947 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VF + I TI+E + + L K I D ++ Sbjct: 948 TVFAHKFITLGTIEEKIDKMLEDKKKIADSIIG 980 >gi|297583813|ref|YP_003699593.1| SNF2-like protein [Bacillus selenitireducens MLS10] gi|297142270|gb|ADH99027.1| SNF2-related protein [Bacillus selenitireducens MLS10] Length = 919 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 77/214 (35%), Gaps = 25/214 (11%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEE---KHWKEVHDEKIK 57 Y E++ + + ++ +K QL N +E + K Sbjct: 691 MYKAVVEEMFDQYEEAPDPVKRAALFKTMMKLKQLCNHPAQARKELGLNRFNPGRSPKWD 750 Query: 58 ALEVII--EKANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEW 104 ++ IV F A Q+ G T + I+ + Sbjct: 751 LANELLSNWANQGKRAIVFTQFRYTGAMFQEMQLIQGNPPVPFLHGGLTAIQRKNMIRSF 810 Query: 105 NE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + IP + + G GLNL + ++ F WW+ +E R + G K+ Sbjct: 811 KDNPDIPFMIISLRAGGFGLNLTE-ASAVLHFDRWWNPA-----VEDQATDRVHRIGQKQ 864 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 AV V+ L+A+ TI+E + ++ K +Q+ L++ Sbjct: 865 AVEVHTLMAEGTIEERIDDLIQKKQQLQEALIDG 898 >gi|15618758|ref|NP_225044.1| SWI/SNF family helicase_2 [Chlamydophila pneumoniae CWL029] gi|16752190|ref|NP_445557.1| SNF2 family helicase [Chlamydophila pneumoniae AR39] gi|33242209|ref|NP_877150.1| swf/snf helicase [Chlamydophila pneumoniae TW-183] gi|4377165|gb|AAD18987.1| SWI/SNF family helicase_2 [Chlamydophila pneumoniae CWL029] gi|8163540|gb|AAF73724.1| helicase, Snf2 family [Chlamydophila pneumoniae AR39] gi|33236720|gb|AAP98807.1| swf/snf helicase [Chlamydophila pneumoniae TW-183] Length = 1166 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 958 LVKQEGFERIHIHVLATLTRLKQICCHPAIFA-KDAPEPGDSAKYDMLMDLLSSLVDSGH 1016 Query: 70 PIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + L ++ + G T ++ Q + + + + G Sbjct: 1017 KTVVFSQYTKMLGIIKKDLESRGIPFVYLDGSTKNRLDLVNQFNEDPSLLVFLISLKAGG 1076 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1077 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQSRSVSSYKLVTLNTIEEKI 1130 Query: 181 LQRLRTKSTIQDLLLNA 197 L K ++ ++N+ Sbjct: 1131 LTLQNRKKSLVKKVINS 1147 >gi|16080681|ref|NP_391509.1| ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. subtilis str. 168] gi|221311584|ref|ZP_03593431.1| hypothetical protein Bsubs1_19616 [Bacillus subtilis subsp. subtilis str. 168] gi|221315911|ref|ZP_03597716.1| hypothetical protein BsubsN3_19532 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320824|ref|ZP_03602118.1| hypothetical protein BsubsJ_19485 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325110|ref|ZP_03606404.1| hypothetical protein BsubsS_19646 [Bacillus subtilis subsp. subtilis str. SMY] gi|81345827|sp|P94593|YWQA_BACSU RecName: Full=Uncharacterized ATP-dependent helicase ywqA gi|2636153|emb|CAB15645.1| putative ATP-binding SNF2 helicase or protein kinase [Bacillus subtilis subsp. subtilis str. 168] Length = 922 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ + + S + Q+ + Y +E+ + + K++ Sbjct: 694 LYEQLVKDTFDHMTSLTGMQRKALILSMLGRLKQICDHPALYLKEEQTELLAGRSVKLEK 753 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWN 105 L ++ +A ++ + ++ + + + ++++ Sbjct: 754 LLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDTLVEKFQ 813 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + P L + G GLNL N ++ + WW+ +E R + G +R V Sbjct: 814 RKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQERFV 867 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +I TI+E + L +K T+ D ++ + Sbjct: 868 HVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 899 >gi|15836382|ref|NP_300906.1| SWI/SNF family helicase_2 [Chlamydophila pneumoniae J138] gi|8979223|dbj|BAA99057.1| SWI/SNF family helicase_2 [Chlamydophila pneumoniae J138] Length = 1166 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 958 LVKQEGFERIHIHVLATLTRLKQICCHPAIFA-KDAPEPGDSAKYDMLMDLLSSLVDSGH 1016 Query: 70 PIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V + L ++ + G T ++ Q + + + + G Sbjct: 1017 KTVVFSQYTKMLGIIKKDLESRGIPFVYLDGSTKNRLDLVNQFNEDPSLLVFLISLKAGG 1076 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1077 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQSRSVSSYKLVTLNTIEEKI 1130 Query: 181 LQRLRTKSTIQDLLLNA 197 L K ++ ++N+ Sbjct: 1131 LTLQNRKKSLVKKVINS 1147 >gi|205375279|ref|ZP_03228069.1| SNF2 family helicase [Bacillus coahuilensis m4-4] Length = 248 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 69/212 (32%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD--EEKHWKEVHDEKIKA 58 Y + +E + L+ + QL N Y E K+ Sbjct: 24 LYEQLVQETFEKLKTLKGFERKGLILQMLGRLKQLCNHPSLYFKEEVPVDVLKRSYKMAK 83 Query: 59 LEVIIEKANAAP--IIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWN 105 L I+E + +V + + +Q++ Sbjct: 84 LHEIVENVVESKEACLVFTQYIGMGEMIQDYVKKRFGVHAPFLNGSMPKQQRDKLVQQFQ 143 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ P+ + G GLNL N +V + WW+ +E R + G + V Sbjct: 144 NGEFPVFILSLKAGGTGLNLTA-ANHVVHYDRWWNPA-----VENQATDRAYRIGQTKFV 197 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LIA T++E + L K + D ++ + Sbjct: 198 HVHKLIASGTLEEKIDGMLEKKQALNDDIIQS 229 >gi|189204870|ref|XP_001938770.1| DNA repair and recombination protein RAD26 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985869|gb|EDU51357.1| DNA repair and recombination protein RAD26 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1246 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 73/227 (32%), Gaps = 33/227 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 K + ++ L E++++ ++ N + + K+ Sbjct: 693 KLTRQQRQAYEAFLASEDMKSIANGKRQMLFGVDFLRKICNHPDLTEHKTLSKKPGYDYG 752 Query: 52 ---HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR------------LQKAFPQGRTL 94 K++ ++ ++ K ++ L ++ Sbjct: 753 NPNRSGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFISQLPDINWRRMDGDTPIK 812 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + N + + G G+NL G N ++ + W+ + Sbjct: 813 DRQNLVDEFNNNPDLHVFLLTTKVGGLGVNLT-GANRVIIYDPDWNPST-----DIQARE 866 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G KR V +Y L++ TI+E + R K + + +L K+ Sbjct: 867 RSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQR 913 >gi|320538119|ref|ZP_08038015.1| protein, SNF2 family [Treponema phagedenis F0421] gi|320145032|gb|EFW36752.1| protein, SNF2 family [Treponema phagedenis F0421] Length = 1211 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 71/213 (33%), Gaps = 23/213 (10%) Query: 1 MKQYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y R+ + + + Q+ N YD+ K+ Sbjct: 985 VAIYESLIRQQLKTALNAKDSIQRSAFIVKLLTALKQVCNHPRTYDKISPPDINLSGKML 1044 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEW 104 +L +++++ ++ + L L++ K + + Sbjct: 1045 SLIILLKEILTAGEKTLIFSQYTETLFLLKEIIKAELDEDCLLLHGQMPARKRQQNVTAF 1104 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E + + G GLNL + ++ F LW++ +E R + G ++ Sbjct: 1105 QTEPDKRIFLISLKAGGTGLNLTA-ASRVIHFDLWYNPA-----VEDQATDRAFRIGQQK 1158 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VFV+ I T +E + + ++ K + D L Sbjct: 1159 HVFVHRFICAGTFEEKIDEMIQRKRAVSDKTLG 1191 >gi|315122947|ref|YP_004064953.1| DNA helicase [Pseudoalteromonas sp. SM9913] gi|315016707|gb|ADT70044.1| DNA helicase [Pseudoalteromonas sp. SM9913] Length = 1058 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 69/203 (33%), Gaps = 21/203 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKA--LE 60 + +L + ++ A +K Q+ + E E K++ Sbjct: 844 RALEEKLIDLFAEQGVQKSKLAFLEALLKLRQICCHPKLIEPET---EAASAKLEWLSSH 900 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + + + +I+ F S L + I E+ G + Sbjct: 901 LPLMLSLGRKVIIFSQFTSALDLIAERLNELNINFSMLTGQTRHRDKVIDEFTSGNTSVF 960 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ F WW+ +E+ R + G VFVY LI Sbjct: 961 LISLKAGGTGLNLTQ-ADTVIHFDPWWNPA-----VEKQATDRAYRIGQTNPVFVYKLIM 1014 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 N+I++ V Q + K + D L Sbjct: 1015 ANSIEQKVFQMQQDKQALVDALF 1037 >gi|188587846|ref|YP_001921061.1| SWI/SNF family helicase [Clostridium botulinum E3 str. Alaska E43] gi|188498127|gb|ACD51263.1| SWI/SNF family helicase [Clostridium botulinum E3 str. Alaska E43] Length = 1086 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 77/211 (36%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y ++ ++L + S K Q+ E KI A Sbjct: 864 KTYSEYAKDLIQKKVEDDEFKNSKIEILSYITKLRQICLDPSVIMENYLGT---SGKIDA 920 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNE 106 L I++ + + I+V F S L L + + ++N+ Sbjct: 921 LLEILDHSISSGHKILVFSQFTSVLKNIGNLLKENNILFSYLDGSVSSINRMRMVDDFND 980 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL +I++ F WW+ +E R + G + V Sbjct: 981 GENNVFLVSLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQATDRAHRIGQENTVE 1034 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIAQ TI+E +++ +K + D +L Sbjct: 1035 VIKLIAQGTIEEKIVELQDSKRKLIDTILGD 1065 >gi|291486201|dbj|BAI87276.1| hypothetical protein BSNT_05537 [Bacillus subtilis subsp. natto BEST195] Length = 922 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ + + S + Q+ + Y +E+ + + K++ Sbjct: 694 LYEQLVKDTFDHMTSLTGMQRKALILSMLGRLKQICDHPALYLKEEQTELLAGRSVKLEK 753 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWN 105 L ++ +A ++ + ++ + + + ++++ Sbjct: 754 LLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSLSKQERDTLVEKFQ 813 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + P L + G GLNL N ++ + WW+ +E R + G +R V Sbjct: 814 RKEYPTLILSLKAGGTGLNLTA-ANHVIHYDRWWNPA-----VENQATDRAYRIGQERFV 867 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ +I TI+E + L +K T+ D ++ + Sbjct: 868 HVHKMITTGTIEEKIDVMLESKQTLNDQIIQS 899 >gi|318040737|ref|ZP_07972693.1| SNF2 family DNA/RNA helicase [Synechococcus sp. CB0101] Length = 1043 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 71/224 (31%), Gaps = 32/224 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y++ E + + + + K Q+ N ++ Sbjct: 806 KLYNQTVEESLDAIARAPLGQKHGQVLALLTKLKQICNHPALALKQDPDPSDVGFFKEFA 865 Query: 52 -HDEKIKALEVIIEKAN--AAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKD 97 K++ LE I+E+ ++ F + + + Sbjct: 866 ARSAKVQRLEEILEEVIEAGDRALLFTQFAEWGHLLKAHLEQRWKQPVPFLYGNTSKAER 925 Query: 98 PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + E L + G GLNL + + WW+ +E R Sbjct: 926 QAMVDRFQEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDR 979 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V V+ I +++E + + ++ KS + + ++ + + Sbjct: 980 AYRIGQQNRVMVHKFITSGSVEERIDRMIKEKSKLAEDIVGSGE 1023 >gi|257456585|ref|ZP_05621780.1| Snf2 family protein [Treponema vincentii ATCC 35580] gi|257446005|gb|EEV21053.1| Snf2 family protein [Treponema vincentii ATCC 35580] Length = 1250 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 60/214 (28%), Gaps = 23/214 (10%) Query: 3 QYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + + Q+ N YDE K AL Sbjct: 1027 LYESLVETQLKNVLKTEEGIKRNALVLKLLTALKQVCNHPHVYDESFQTNVTLSGKTAAL 1086 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKA------------FPQGRTLDKDPCTIQEWN 105 ++ + ++ + L L+K Q + Sbjct: 1087 MQLLGEILDAGEKTLIFSQYTQTLFLLRKLIQEQFGDEPLLLHGQMPLSARKAAVESFQT 1146 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL ++ F LW++ IE R + G V Sbjct: 1147 NPAQRIFLISLKAGGTGLNLTA-ATRVIHFDLWYNPA-----IEDQATDRAFRIGQHNTV 1200 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 FV I T +E + + ++ K I + L+ + Sbjct: 1201 FVSRFICAGTFEEKIDEMIQKKRHISQMTLSGGE 1234 >gi|153940180|ref|YP_001390936.1| SNF2 family helicase [Clostridium botulinum F str. Langeland] gi|152936076|gb|ABS41574.1| helicase, Snf2 family [Clostridium botulinum F str. Langeland] gi|295318999|gb|ADF99376.1| helicase, Snf2 family [Clostridium botulinum F str. 230613] Length = 1097 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + + + L+ + S + QL +E K++ Sbjct: 877 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK---GGSSKLRIAME 933 Query: 62 IIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN-EGK 108 ++++ I++ F S L + + ++N Sbjct: 934 LVQEGVDEGKKILLFSQFTSVLKNISRLLKKECIEYFYLDGSTNASERIKLVDKFNKNSH 993 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ +E R + G K V V Sbjct: 994 VKVFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----VEDQATDRAHRIGQKNLVQVI 1047 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1048 KLVCKGTIEEKIIMLQEDKKELINNVMNS 1076 >gi|194397845|ref|YP_002038154.1| SNF2 family protein [Streptococcus pneumoniae G54] gi|194357512|gb|ACF55960.1| SNF2 family protein [Streptococcus pneumoniae G54] Length = 1032 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 24/212 (11%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEIXSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + +++ F L + + +N+G+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQELPDLGLTSFKITGSTPAKERQDMTKAFNQGERD 928 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNL G + ++ LWW+ +E + R + G + V VY L Sbjct: 929 AFLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAIGRAHRMGQEETVEVYRL 982 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + TI+E + + K + +L+ + Sbjct: 983 VTKGTIEEKIQELQEQKKHLVSQVLDGTESRG 1014 >gi|325107086|ref|YP_004268154.1| SNF2-related protein [Planctomyces brasiliensis DSM 5305] gi|324967354|gb|ADY58132.1| SNF2-related protein [Planctomyces brasiliensis DSM 5305] Length = 610 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 23/206 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++E L G+ I + ++ Q+ N + + +++ A Sbjct: 378 AYDIAEKEGVVQLNDMGDEITIQHVFELVMRLKQITN-----CDPLTGESAKKDRLVADM 432 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTIQEW-NEGKIPL 111 I A+ A I+ + + L + + G + ++++ + L Sbjct: 433 EEI-AASGAKAILFSQWTKTIDWLYEHTKQFGALVYHGGVPTKQREPILKQFKEDPNSHL 491 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + GLNLQ+ + + WW+ IE + R + G K V V I Sbjct: 492 LLMSYGTGAVGLNLQF-SQYVFLYDRWWNPA-----IEDQAINRAHRIGVKNPVIVTRFI 545 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 ++T++E + L+ K I + +L Sbjct: 546 CKDTVEERIDLVLQQKRAIFEKVLGE 571 >gi|309800861|ref|ZP_07694993.1| SNF2 family N-terminal domain protein [Bifidobacterium dentium JCVIHMP022] gi|308222397|gb|EFO78677.1| SNF2 family N-terminal domain protein [Bifidobacterium dentium JCVIHMP022] Length = 1277 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDL-----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L N ++ +L + K+ Sbjct: 1055 KLYAAHEQRLRAALTKTRDADFNTSRIRILAEFTLLRELCCDPRLVYADAKN---GSAKL 1111 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW 104 +A++ ++ +++ F S L + A K + E+ Sbjct: 1112 EAIDDLVVNCMDEGKKVLIFSQFTSFLDLIGVRLAEHGVAFHAITGETPKRKRVELVDEF 1171 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +P+ + GLNL G ++++ WW+ + + R + G + Sbjct: 1172 NGDDVPVFLISLKAGNTGLNL-VGASVVIHADPWWN-----EAAQNQATDRAHRIGQTQD 1225 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ R KS + + Sbjct: 1226 VNVYRIVAKDTIEERMLKLQRDKSRLARQFTDG 1258 >gi|306822587|ref|ZP_07455965.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679] gi|304554132|gb|EFM42041.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679] Length = 1286 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDL-----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L N ++ +L + K+ Sbjct: 1064 KLYAAHEQRLRAALTKTRDADFNTSRIRILAEFTLLRELCCDPRLVYADAKN---GSAKL 1120 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW 104 +A++ ++ +++ F S L + A K + E+ Sbjct: 1121 EAIDDLVVNCMDEGKKVLIFSQFTSFLDLIGVRLAEHGVAFHAITGETPKRKRVELVDEF 1180 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +P+ + GLNL G ++++ WW+ + + R + G + Sbjct: 1181 NGDDVPVFLISLKAGNTGLNL-VGASVVIHADPWWN-----EAAQNQATDRAHRIGQTQD 1234 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ R KS + + Sbjct: 1235 VNVYRIVAKDTIEERMLKLQRDKSRLARQFTDG 1267 >gi|217964204|ref|YP_002349882.1| DNA/RNA helicase protein [Listeria monocytogenes HCC23] gi|217333474|gb|ACK39268.1| DNA/RNA helicase protein [Listeria monocytogenes HCC23] gi|307571229|emb|CAR84408.1| helicase, Snf2 family [Listeria monocytogenes L99] Length = 1072 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 72/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 908 TARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + K + D L+ Sbjct: 1022 KGTIEERIFDLQKKKQALVDELIQ 1045 >gi|254852266|ref|ZP_05241614.1| helicase [Listeria monocytogenes FSL R2-503] gi|300766136|ref|ZP_07076102.1| Snf2 family helicase [Listeria monocytogenes FSL N1-017] gi|258605574|gb|EEW18182.1| helicase [Listeria monocytogenes FSL R2-503] gi|300513159|gb|EFK40240.1| Snf2 family helicase [Listeria monocytogenes FSL N1-017] Length = 1072 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 72/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 908 TARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + K + D L+ Sbjct: 1022 KGTIEERIFDLQKKKQALVDELIQ 1045 >gi|296119487|ref|ZP_06838045.1| putative DNA/RNA helicase [Corynebacterium ammoniagenes DSM 20306] gi|295967370|gb|EFG80637.1| putative DNA/RNA helicase [Corynebacterium ammoniagenes DSM 20306] Length = 1036 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 74/224 (33%), Gaps = 27/224 (12%) Query: 3 QYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEK 55 Y ++ ++ S + Q+ N +Y + K Sbjct: 803 LYKALVDDIQLRMETAPKGMALRGLVLSSLTRIKQICNHPAHYLGDGSPVTSKGKHRSGK 862 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQ 102 ++ L I++ + +++ + + LQ G T ++ + Sbjct: 863 VEKLMEILDSAVTHDERVLIFTQYKAFGDILQPYLSAQLGAKIPFLHGGVTKNRRDDMVT 922 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ P + + G GLNL NI+V WW+ +E R + G Sbjct: 923 DFQAADGPPAMILSLKAGGTGLNLTA-ANIVVHMDRWWNPA-----VENQATDRAFRIGQ 976 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V VY +I T++E + L K+ + ++ + + Sbjct: 977 SKNVQVYKMITAGTLEESIQDILDGKTQLAGAVVGEGEGWITEL 1020 >gi|46907873|ref|YP_014262.1| SNF2 family helicase [Listeria monocytogenes str. 4b F2365] gi|254931583|ref|ZP_05264942.1| helicase [Listeria monocytogenes HPB2262] gi|46881142|gb|AAT04439.1| helicase, Snf2 family [Listeria monocytogenes serotype 4b str. F2365] gi|293583138|gb|EFF95170.1| helicase [Listeria monocytogenes HPB2262] Length = 1072 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 73/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L + E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNASEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 908 TARENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + K + D L+ Sbjct: 1022 KGTIEERIFDLQKKKQALVDELIQ 1045 >gi|284040459|ref|YP_003390389.1| SNF2-related protein [Spirosoma linguale DSM 74] gi|283819752|gb|ADB41590.1| SNF2-related protein [Spirosoma linguale DSM 74] Length = 1185 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 72/206 (34%), Gaps = 22/206 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +E ++ ++ A Q+ N Y ++ + K L Sbjct: 961 LYQSVVQESLRAIEEKDGIARRGLVLKLMTALKQIGNHPHQYLKKGNAAPSLSGKATLLL 1020 Query: 61 VII--EKANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNEG 107 ++ AN +++ + L + G + + ++++ Sbjct: 1021 SLLETIYANHEKVLIFTQYKEMGELLTQFIQQSFGTQPLFLHGGTSRPERDRMVEQFQRN 1080 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL N ++ F LWW+ +E R + G + V Sbjct: 1081 RSDHTFILSLKAGGTGLNLTQ-ANHVIHFDLWWNPA-----VESQATDRAFRIGQTKNVM 1134 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQD 192 VY L+ Q T++E + +R+K + D Sbjct: 1135 VYRLMNQGTLEEKIDAMIRSKRELAD 1160 >gi|119487132|ref|XP_001262421.1| DNA repair protein Rhp26/Rad26, putative [Neosartorya fischeri NRRL 181] gi|119410578|gb|EAW20524.1| DNA repair protein Rhp26/Rad26, putative [Neosartorya fischeri NRRL 181] Length = 1214 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 69/219 (31%), Gaps = 28/219 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HDEKI 56 Y F + +++ ++ N + + ++ K+ Sbjct: 705 AYESFLKS--EEMESILKGRRQILYGVDILRKICNHPDLQNHKLQSHQLGYGNANKSGKM 762 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKDPCTIQ 102 + ++ ++ + ++ L ++ ++ + Sbjct: 763 QVVKSLLELWRDTGHKTLLFAQHRIMLDILEKFVRSLSGFNHRRMDGTTPIQNRQTMVDE 822 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ I + G G+NL G + ++ + W+ + R + G K Sbjct: 823 FNNDPNIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAWRLGQK 876 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R V VY L+ TI+E + R K + + +L K+ Sbjct: 877 RDVSVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 915 >gi|47093680|ref|ZP_00231434.1| helicase, Snf2 family [Listeria monocytogenes str. 4b H7858] gi|47017941|gb|EAL08720.1| helicase, Snf2 family [Listeria monocytogenes str. 4b H7858] gi|328465005|gb|EGF36284.1| SNF2 family helicase [Listeria monocytogenes 1816] Length = 1072 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 73/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L + E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNASEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 908 TARENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + K + D L+ Sbjct: 1022 KGTIEERIFDLQKKKQALVDELIQ 1045 >gi|315655316|ref|ZP_07908216.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315490256|gb|EFU79881.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] Length = 988 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 66/196 (33%), Gaps = 20/196 (10%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV------IIEKANAAPIIVAY 75 N + + QLA A D + H + + +V Sbjct: 785 RINILTALTRLRQLALSAKLIDPQAHEDGAKVTYLLQTLEGLRDDSNLNPRQRHQALVFS 844 Query: 76 HFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 F S LA L+ T + + G++ + + G GLNL Sbjct: 845 QFTSFLAILRERLDQAGIDYAYLDGTSRDRDRQVARFQNGEVDVFLISLKAGGFGLNLTQ 904 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + WW+ E V R + G KR V VY L+A +TI++ VL+ K Sbjct: 905 -ADYVFLTDPWWNPAA-----EAQAVDRAHRLGQKRFVNVYRLVATDTIEQRVLELQERK 958 Query: 188 STIQDLLLNALKKETI 203 + +L+ + + Sbjct: 959 RDLIGAVLSGQENREV 974 >gi|226224245|ref|YP_002758352.1| SNF2-type helicase [Listeria monocytogenes Clip81459] gi|225876707|emb|CAS05416.1| Putative SNF2-type helicase [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 1072 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 73/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L + E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNASEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 908 TARENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + K + D L+ Sbjct: 1022 KGTIEERIFDLQKKKQALVDELIQ 1045 >gi|254824296|ref|ZP_05229297.1| helicase [Listeria monocytogenes FSL J1-194] gi|255520940|ref|ZP_05388177.1| hypothetical protein LmonocFSL_06916 [Listeria monocytogenes FSL J1-175] gi|293593530|gb|EFG01291.1| helicase [Listeria monocytogenes FSL J1-194] Length = 1072 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 72/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 908 TARENGKRILLFSQFTGMLGIIRQKLEEEGQPLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + K + D L+ Sbjct: 1022 KGTIEERIFDLQKKKQALVDELIQ 1045 >gi|188591304|ref|YP_001795904.1| DNA/RNA helicase [Cupriavidus taiwanensis LMG 19424] gi|170938198|emb|CAP63184.1| putative DNA/RNA Helicase [Cupriavidus taiwanensis LMG 19424] Length = 997 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 67/192 (34%), Gaps = 22/192 (11%) Query: 22 AFNSASKTVKCLQLANGAVYYDE----EKHWKEVHDEKIKALEVIIE--KANAAPIIVAY 75 + ++ ++ + A + + K++A + A+ +V Sbjct: 788 RLHVLAQLMRLRRAACDPRLVTPEVAAQLSDQGGEGAKVRAFVELASGLAASGHKTLVFS 847 Query: 76 HFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 F L L++ + + + G+ + + G GLNL Sbjct: 848 QFVDFLQLLRQGLERAGLALQYLDGATPAAERTRRVAAFQAGEGDVFLISLKAGGFGLNL 907 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ WW+ E + R + G +R V VY LI TI+E +++ R Sbjct: 908 TA-ADYVIVADPWWNPAA-----EDQAMGRAHRIGQRRPVTVYRLINAGTIEERIVELHR 961 Query: 186 TKSTIQDLLLNA 197 K + D LL A Sbjct: 962 DKRALADGLLEA 973 >gi|227487933|ref|ZP_03918249.1| chromodomain helicase [Corynebacterium glucuronolyticum ATCC 51867] gi|227542574|ref|ZP_03972623.1| chromodomain helicase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092139|gb|EEI27451.1| chromodomain helicase [Corynebacterium glucuronolyticum ATCC 51867] gi|227181772|gb|EEI62744.1| chromodomain helicase [Corynebacterium glucuronolyticum ATCC 51866] Length = 1039 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 76/216 (35%), Gaps = 28/216 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYY----DEEKHWKEVHDE 54 Y + ++ LQ + + + + Q+ N ++ E H + Sbjct: 796 LYKSYVDDVQRKLQEQKMGGIQYRGIVLASLTRIKQICNHPAHFLGDGSEMTHHGKHRSG 855 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTI 101 K++ L I++ A +++ + + LQ G + Sbjct: 856 KVEKLMEIVDAALLRERRVLIFTQYTAFGTMLQHYLAERTGIDIPFLHGGVPQKMRTRMV 915 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ EG P+ + G GLNL +V WW+ +E R + G Sbjct: 916 ADFQSEGGPPIFILSLKAGGTGLNLTA-ATEVVHMDRWWNPA-----VEDQATDRAYRIG 969 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VY ++A T++E + + L K+ + ++ Sbjct: 970 QESDVHVYKMVAAGTLEEKIQKVLEEKTALAGSVVG 1005 >gi|289434930|ref|YP_003464802.1| helicase, Snf2 family [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171174|emb|CBH27716.1| helicase, Snf2 family [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 1071 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 75/204 (36%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L + E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLAESNGNASEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N +++ F LA ++ + +NEG+ + Sbjct: 908 TARENGKRLLIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPAKTRLDMVNSFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + + K + D L+ Sbjct: 1022 KGTIEERIFELQKKKQALVDELIQ 1045 >gi|260888903|ref|ZP_05900166.1| superfamily II DNA/RNA helicase, SNF2 family [Leptotrichia hofstadii F0254] gi|260861350|gb|EEX75850.1| superfamily II DNA/RNA helicase, SNF2 family [Leptotrichia hofstadii F0254] Length = 1119 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 77/208 (37%), Gaps = 20/208 (9%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + ++ + E + K Q+ N +DE + + +K Sbjct: 904 KLYMAYVKQAKKELREFDKEENNNLKVLAILTKLRQICNSPQLFDENYKGEVAKIKLLKE 963 Query: 59 LEVIIEKANAAPIIVAYHF----------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 L I + N +++ F + +++N G+ Sbjct: 964 LMPDILENNH-RMLIFSQFLGTLEEIKIELEKEEVKYFFIDGSVKSKERMEISKKFNSGE 1022 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 ++ + G GLNL G ++++ + WW+ +E R + G K++V V Sbjct: 1023 GQVVLISLKAGGTGLNL-VGADVVIHYDPWWNFA-----VENQASDRAHRIGQKKSVQVI 1076 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI + TI+E +++ K T+ + +L Sbjct: 1077 KLITEGTIEEKIIKLQEKKRTLSENILE 1104 >gi|187779742|ref|ZP_02996215.1| hypothetical protein CLOSPO_03338 [Clostridium sporogenes ATCC 15579] gi|187773367|gb|EDU37169.1| hypothetical protein CLOSPO_03338 [Clostridium sporogenes ATCC 15579] Length = 1081 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 72/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + + + L+ + S + QL +E K++ Sbjct: 861 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSLIIDEYK---GGSSKLRIAME 917 Query: 62 IIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGK 108 ++++ I++ F S L + + E+N Sbjct: 918 LVQEGVDEGKKILLFSQFTSVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNSN 977 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ +E R + G K V V Sbjct: 978 VKVFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----VEDQATDRAHRIGQKNLVQVI 1031 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1032 KLVCKGTIEEKIIMLQDDKKELINNVMNS 1060 >gi|254829448|ref|ZP_05234135.1| helicase [Listeria monocytogenes FSL N3-165] gi|258601864|gb|EEW15189.1| helicase [Listeria monocytogenes FSL N3-165] Length = 1072 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 72/204 (35%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 908 TARENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + K + D L+ Sbjct: 1022 KGTIEERIFDLQKKKQALVDELIQ 1045 >gi|258650324|ref|YP_003199480.1| SNF2-like protein [Nakamurella multipartita DSM 44233] gi|258553549|gb|ACV76491.1| SNF2-related protein [Nakamurella multipartita DSM 44233] Length = 1141 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 74/213 (34%), Gaps = 25/213 (11%) Query: 2 KQYH---KFQRELYCDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 + Y + +R+ L + F QL+ DE ++++ Sbjct: 915 QVYQRHLQRERQKILGLLQDKRSLDDHRFQILRSLTLLRQLSLDPSLVDE--SYRDIPSS 972 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEW 104 K++ I + + ++V F LAR + ++ + Sbjct: 973 KLEVAIDRICEIVESGHRVLVFSQFTRFLARARDQLHHLGIAHCLLDGRTKDRSAVVEAF 1032 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G P+ + G GLNL + + WW+ E + R + G + Sbjct: 1033 RTGVAPVFLISLKAGGFGLNLTE-ADYCILLDPWWNPAA-----EAQAIDRAHRIGQTKN 1086 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY +A+ TI+E V+ K+ + D +L A Sbjct: 1087 VIVYRYVARGTIEEKVMALKAGKAKLFDDVLGA 1119 >gi|167757228|ref|ZP_02429355.1| hypothetical protein CLORAM_02778 [Clostridium ramosum DSM 1402] gi|167703403|gb|EDS17982.1| hypothetical protein CLORAM_02778 [Clostridium ramosum DSM 1402] Length = 1078 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 66/203 (32%), Gaps = 21/203 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +EL L +N++ + + Q+ + K+ +I Sbjct: 865 QVNKELQEQLNYDNVDRIAILAMLTRLRQICCEPRIIYDNISNI---SSKLSGCLDLIRN 921 Query: 66 A--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 N +++ F S L ++ + ++ + Sbjct: 922 FLGNNQKVLLFSSFTSVLDLIAKELEKESITYYQLTGDTKKEERHRLVNQFQNDDTTVFL 981 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL ++ F WW++ R + G + V VY L+ + Sbjct: 982 ISLKAGGTGLNLTA-AEAVIHFDPWWNMSAQ-----NQATDRAYRIGQENVVTVYKLVMK 1035 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 ++++E +L+ K + D + Sbjct: 1036 DSVEEKILELQNKKKNLADSFVE 1058 >gi|237735687|ref|ZP_04566168.1| SWF/SNF family helicase [Mollicutes bacterium D7] gi|229381432|gb|EEO31523.1| SWF/SNF family helicase [Coprobacillus sp. D7] Length = 847 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 66/203 (32%), Gaps = 21/203 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +EL L +N++ + + Q+ + K+ +I Sbjct: 634 QVNKELQEQLNYDNVDRIAILAMLTRLRQICCEPRIIYDNISNI---SSKLSGCLDLIRN 690 Query: 66 A--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 N +++ F S L ++ + ++ + Sbjct: 691 FLGNNQKVLLFSSFTSVLDLIAKELEKESITYYQLTGDTKKEERHRLVNQFQNDDTTVFL 750 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL ++ F WW++ R + G + V VY L+ + Sbjct: 751 ISLKAGGTGLNLTA-AEAVIHFDPWWNMSAQ-----NQATDRAYRIGQENVVTVYKLVMK 804 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 ++++E +L+ K + D + Sbjct: 805 DSVEEKILELQNKKKNLADSFVE 827 >gi|239615027|gb|EEQ92014.1| DNA repair and recombination protein RAD26 [Ajellomyces dermatitidis ER-3] gi|327349863|gb|EGE78720.1| DNA repair and recombination protein RAD26 [Ajellomyces dermatitidis ATCC 18188] Length = 1260 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K QR Y L + + + ++ N + + K+ Sbjct: 709 KIQRSAYEAFLGSNEMSSILRGRREALYGIDMLRKICNHPDLPEHKTLSKKSSYNYGSAS 768 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDK-DP 98 K++ ++ ++ + ++ L + G T K Sbjct: 769 KSGKMQIVKSLLELWRDTGHKTLLFAQHRIMLDILERFIKSLSGFKYQRMDGNTPIKLRQ 828 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N I + G G+NL G + ++ + W+ + R Sbjct: 829 SMVDEFNNNPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERSW 882 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 883 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 926 >gi|261188034|ref|XP_002620434.1| DNA repair and recombination protein RAD26 [Ajellomyces dermatitidis SLH14081] gi|239593445|gb|EEQ76026.1| DNA repair and recombination protein RAD26 [Ajellomyces dermatitidis SLH14081] Length = 1260 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K QR Y L + + + ++ N + + K+ Sbjct: 709 KIQRSAYEAFLGSNEMSSILRGRREALYGIDMLRKICNHPDLPEHKTLSKKSSYNYGSAS 768 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDK-DP 98 K++ ++ ++ + ++ L + G T K Sbjct: 769 KSGKMQIVKSLLELWRDTGHKTLLFAQHRIMLDILERFIKSLSGFKYQRMDGNTPIKLRQ 828 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N I + G G+NL G + ++ + W+ + R Sbjct: 829 SMVDEFNNNPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERSW 882 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 883 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 926 >gi|170755011|ref|YP_001781230.1| SNF2 family helicase [Clostridium botulinum B1 str. Okra] gi|169120223|gb|ACA44059.1| helicase, Snf2 family [Clostridium botulinum B1 str. Okra] Length = 1097 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + + + L+ + S + QL +E K++ Sbjct: 877 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK---GGSSKLRIAME 933 Query: 62 IIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN-EGK 108 ++++ I++ F S L + + ++N Sbjct: 934 LVQEGVDEGKKILLFSQFTSVLKNISRLLKKECIEYFYLDGSTNASERIKLVDKFNKNSH 993 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ +E R + G K V V Sbjct: 994 VKVFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----VEDQATDRAHRIGQKNLVQVI 1047 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1048 KLVCKGTIEEKIIMLQEDKKELINNVMNS 1076 >gi|326798503|ref|YP_004316322.1| SNF2-related protein [Sphingobacterium sp. 21] gi|326549267|gb|ADZ77652.1| SNF2-related protein [Sphingobacterium sp. 21] Length = 970 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 76/209 (36%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y K + E L +++ K QLAN DE+ + E Sbjct: 749 EYYEKIKSEYRNVLLEQSLDELMVKSQIQVLQGLTKLRQLANHPRMVDEDYEGESGKFEN 808 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNE 106 + + +++ F L ++ F G T +++ N Sbjct: 809 VVHTLDSVLSR-GHKVLIFSQFVKQLEIFRRHFDKKKIRYAYLDGSTRNREDVVNDFRNN 867 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ L + G GLNL + + WW+ QQ I+R + G + VF Sbjct: 868 EEVKLFLISIKAGGVGLNL-IEADYVFILDPWWNPAVEQQAIDR-----SHRIGQTKNVF 921 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y I +++++E +L K TI + L+ Sbjct: 922 IYKFITKDSVEEKILALQDRKKTIANQLI 950 >gi|327183628|gb|AEA32075.1| Non-specific serine/threonine protein kinase [Lactobacillus amylovorus GRL 1118] Length = 1179 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 88/226 (38%), Gaps = 34/226 (15%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 YH ++ L G++ + F ++ K ++ + H +K+K Sbjct: 958 LYHLQMNKIIAQLNGQDDDDFKKFRFQILAQITKLREICCDPHLLYDNYH---GKSDKLK 1014 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 A +I+ N I++ F S L +K IQ +N Sbjct: 1015 ATIDLIKSNLENGHKILLFSQFTSMLDILQEKLAKLKVPTFMLTGSTPKEKRQEDIQHFN 1074 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K P + + G G+NL ++++ + WW++ E R + G K + Sbjct: 1075 SLKQPGVFLISLKAGGTGINLTS-ADVVIHYDPWWNIAA-----ENQATDRAHRIGQKNS 1128 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-------ALKKETI 203 V +Y ++ Q+TI+E +++ + K+ + +LN A+ +E + Sbjct: 1129 VKIYKMVTQDTIEERIIKLQQKKAELAQAILNNKDMANAAMNREDL 1174 >gi|282880921|ref|ZP_06289612.1| SNF2 family N-terminal domain protein [Prevotella timonensis CRIS 5C-B1] gi|281305144|gb|EFA97213.1| SNF2 family N-terminal domain protein [Prevotella timonensis CRIS 5C-B1] Length = 1254 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 74/209 (35%), Gaps = 21/209 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y +++ E ++ S+ K Q+A D + K+ Sbjct: 1036 LAMYELHRKKAEELALAEEGVKLSTLSEITKLRQMACSISLVD---KTWKKTSSKLSTFI 1092 Query: 61 VIIEKAN--AAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + E N +V F S L + K + E+ +G Sbjct: 1093 ALAESLNDSGGRALVFSQFTSFLAEVRQVMDKIKLPYLYLDGATPIKKREEIVDEFQKGN 1152 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P + G GLNL N ++ WW+ Q R + G + V VY Sbjct: 1153 YPFFLISLKAGGLGLNLTA-ANYVIHLDPWWNPAIEQ-----QATDRAYRIGQRNDVTVY 1206 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +LIAQ+TI+E +++ +TK + D LL Sbjct: 1207 HLIAQHTIEEKIIRLHKTKRDLADSLLEG 1235 >gi|255974902|ref|ZP_05425488.1| Snf2 family protein [Enterococcus faecalis T2] gi|307278760|ref|ZP_07559826.1| protein, SNF2 family [Enterococcus faecalis TX0860] gi|255967774|gb|EET98396.1| Snf2 family protein [Enterococcus faecalis T2] gi|306504566|gb|EFM73770.1| protein, SNF2 family [Enterococcus faecalis TX0860] Length = 1065 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|269302635|gb|ACZ32735.1| SNF2/helicase domain protein [Chlamydophila pneumoniae LPCoLN] Length = 1166 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 18/197 (9%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAA 69 +G + + + Q+ + + + K L ++ + Sbjct: 958 LVKQEGFERIHIHVLATLTRLKQICCHPAIFA-KDAPEPGDSAKYDMLMDLLSSLVDSGH 1016 Query: 70 PIIVAYHFNSDLARLQ---------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 V + L ++ + G T ++ Q + + + + G Sbjct: 1017 KTAVFSQYTKMLGIIKKDLESRGIPFVYLDGSTKNRLDLVNQFNEDPSLLVFLISLKAGG 1076 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++ + +WW+ +E R + G R+V Y L+ NTI+E + Sbjct: 1077 TGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQSRSVSSYKLVTLNTIEEKI 1130 Query: 181 LQRLRTKSTIQDLLLNA 197 L K ++ ++N+ Sbjct: 1131 LTLQNRKKSLVKKVINS 1147 >gi|315174973|gb|EFU18990.1| protein, SNF2 family [Enterococcus faecalis TX1346] Length = 1065 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|229544926|ref|ZP_04433651.1| Snf2 family helicase [Enterococcus faecalis TX1322] gi|229309818|gb|EEN75805.1| Snf2 family helicase [Enterococcus faecalis TX1322] Length = 1065 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|257416863|ref|ZP_05593857.1| Snf2 family protein [Enterococcus faecalis AR01/DG] gi|257158691|gb|EEU88651.1| Snf2 family protein [Enterococcus faecalis ARO1/DG] Length = 1065 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|257090879|ref|ZP_05585240.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|312902516|ref|ZP_07761722.1| protein, SNF2 family [Enterococcus faecalis TX0635] gi|256999691|gb|EEU86211.1| conserved hypothetical protein [Enterococcus faecalis CH188] gi|310634186|gb|EFQ17469.1| protein, SNF2 family [Enterococcus faecalis TX0635] gi|315579675|gb|EFU91866.1| protein, SNF2 family [Enterococcus faecalis TX0630] Length = 1065 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|307276930|ref|ZP_07558040.1| protein, SNF2 family [Enterococcus faecalis TX2134] gi|306506353|gb|EFM75513.1| protein, SNF2 family [Enterococcus faecalis TX2134] gi|315143788|gb|EFT87804.1| protein, SNF2 family [Enterococcus faecalis TX2141] Length = 1065 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|257420085|ref|ZP_05597079.1| conserved hypothetical protein [Enterococcus faecalis T11] gi|257161913|gb|EEU91873.1| conserved hypothetical protein [Enterococcus faecalis T11] Length = 1065 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|255971908|ref|ZP_05422494.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|312953715|ref|ZP_07772550.1| protein, SNF2 family [Enterococcus faecalis TX0102] gi|255962926|gb|EET95402.1| conserved hypothetical protein [Enterococcus faecalis T1] gi|295113640|emb|CBL32277.1| Superfamily II DNA/RNA helicases, SNF2 family [Enterococcus sp. 7L76] gi|310628362|gb|EFQ11645.1| protein, SNF2 family [Enterococcus faecalis TX0102] gi|315149934|gb|EFT93950.1| protein, SNF2 family [Enterococcus faecalis TX0012] gi|315151814|gb|EFT95830.1| protein, SNF2 family [Enterococcus faecalis TX0031] gi|315159334|gb|EFU03351.1| protein, SNF2 family [Enterococcus faecalis TX0312] gi|323481616|gb|ADX81055.1| SNF2-type helicase [Enterococcus faecalis 62] Length = 1065 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|257079857|ref|ZP_05574218.1| Snf2 family protein [Enterococcus faecalis JH1] gi|294780417|ref|ZP_06745783.1| SNF2 family N-terminal domain protein [Enterococcus faecalis PC1.1] gi|307269625|ref|ZP_07550961.1| protein, SNF2 family [Enterococcus faecalis TX4248] gi|256987887|gb|EEU75189.1| Snf2 family protein [Enterococcus faecalis JH1] gi|294452517|gb|EFG20953.1| SNF2 family N-terminal domain protein [Enterococcus faecalis PC1.1] gi|306514042|gb|EFM82627.1| protein, SNF2 family [Enterococcus faecalis TX4248] gi|329570678|gb|EGG52395.1| protein, SNF2 family [Enterococcus faecalis TX1467] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|256957920|ref|ZP_05562091.1| Snf2 family protein [Enterococcus faecalis DS5] gi|256948416|gb|EEU65048.1| Snf2 family protein [Enterococcus faecalis DS5] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|257087662|ref|ZP_05582023.1| Snf2 family protein [Enterococcus faecalis D6] gi|300861266|ref|ZP_07107353.1| SNF2 family N-terminal domain protein [Enterococcus faecalis TUSoD Ef11] gi|307288690|ref|ZP_07568670.1| protein, SNF2 family [Enterococcus faecalis TX0109] gi|256995692|gb|EEU82994.1| Snf2 family protein [Enterococcus faecalis D6] gi|300850305|gb|EFK78055.1| SNF2 family N-terminal domain protein [Enterococcus faecalis TUSoD Ef11] gi|306500356|gb|EFM69693.1| protein, SNF2 family [Enterococcus faecalis TX0109] gi|315025539|gb|EFT37471.1| protein, SNF2 family [Enterococcus faecalis TX2137] gi|315035196|gb|EFT47128.1| protein, SNF2 family [Enterococcus faecalis TX0027] gi|315165356|gb|EFU09373.1| protein, SNF2 family [Enterococcus faecalis TX1302] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|229549191|ref|ZP_04437916.1| Snf2 family helicase [Enterococcus faecalis ATCC 29200] gi|229305428|gb|EEN71424.1| Snf2 family helicase [Enterococcus faecalis ATCC 29200] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|227519520|ref|ZP_03949569.1| Snf2 family helicase [Enterococcus faecalis TX0104] gi|227073045|gb|EEI11008.1| Snf2 family helicase [Enterococcus faecalis TX0104] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|29377168|ref|NP_816322.1| Snf2 family protein [Enterococcus faecalis V583] gi|227554179|ref|ZP_03984226.1| Snf2 family helicase [Enterococcus faecalis HH22] gi|256763318|ref|ZP_05503898.1| Snf2 family protein [Enterococcus faecalis T3] gi|256963798|ref|ZP_05567969.1| Snf2 family protein [Enterococcus faecalis HIP11704] gi|257084340|ref|ZP_05578701.1| Snf2 family protein [Enterococcus faecalis Fly1] gi|257421693|ref|ZP_05598683.1| Snf2 family protein [Enterococcus faecalis X98] gi|307271745|ref|ZP_07553016.1| protein, SNF2 family [Enterococcus faecalis TX0855] gi|312900055|ref|ZP_07759372.1| protein, SNF2 family [Enterococcus faecalis TX0470] gi|29344634|gb|AAO82392.1| Snf2 family protein [Enterococcus faecalis V583] gi|227176678|gb|EEI57650.1| Snf2 family helicase [Enterococcus faecalis HH22] gi|256684569|gb|EEU24264.1| Snf2 family protein [Enterococcus faecalis T3] gi|256954294|gb|EEU70926.1| Snf2 family protein [Enterococcus faecalis HIP11704] gi|256992370|gb|EEU79672.1| Snf2 family protein [Enterococcus faecalis Fly1] gi|257163517|gb|EEU93477.1| Snf2 family protein [Enterococcus faecalis X98] gi|306511623|gb|EFM80622.1| protein, SNF2 family [Enterococcus faecalis TX0855] gi|311292812|gb|EFQ71368.1| protein, SNF2 family [Enterococcus faecalis TX0470] gi|315155557|gb|EFT99573.1| protein, SNF2 family [Enterococcus faecalis TX0043] gi|315573810|gb|EFU86001.1| protein, SNF2 family [Enterococcus faecalis TX0309B] gi|315580246|gb|EFU92437.1| protein, SNF2 family [Enterococcus faecalis TX0309A] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|327535910|gb|AEA94744.1| Snf2 family protein [Enterococcus faecalis OG1RF] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|313618637|gb|EFR90589.1| SNF2 family helicase [Listeria innocua FSL S4-378] Length = 208 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 69/188 (36%), Gaps = 21/188 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFN 78 E + + Q+ + E + K+ L I+ + N I++ F Sbjct: 3 ERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQTARENGKRILIFSQFT 59 Query: 79 SDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 LA ++ + +NEG+ + + G GLNL G Sbjct: 60 GMLAIIRRKLEEDGQPLFYMDGKTPAKTRLDMVNAFNEGENDIFLISLKAGGTGLNL-VG 118 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ + LWW+ +E R + G KR V V+ +I + TI+E + + K Sbjct: 119 ADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMITKGTIEERIFDLQKKKQ 173 Query: 189 TIQDLLLN 196 + D L+ Sbjct: 174 ALVDELIQ 181 >gi|256853990|ref|ZP_05559355.1| Snf2 family protein [Enterococcus faecalis T8] gi|307290304|ref|ZP_07570220.1| protein, SNF2 family [Enterococcus faecalis TX0411] gi|256710933|gb|EEU25976.1| Snf2 family protein [Enterococcus faecalis T8] gi|306498725|gb|EFM68226.1| protein, SNF2 family [Enterococcus faecalis TX0411] gi|315030488|gb|EFT42420.1| protein, SNF2 family [Enterococcus faecalis TX4000] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|256419642|ref|YP_003120295.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] gi|256034550|gb|ACU58094.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] Length = 1250 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 64/195 (32%), Gaps = 17/195 (8%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPI 71 + QG +K Q+ + +E + + + + + E + + Sbjct: 1042 VIEDQGMERSQLTILQGLMKLRQICDSPAILNEAEQYPNHSVKLHELTREMSENISNHKV 1101 Query: 72 IVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++ F + +++ + + G Sbjct: 1102 LIFSQFLGMLGLIREKLQHMKVPFEYFDGSTSATERERAIQNFQTNDDCRVFLISLKAGG 1161 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL + + WW+ QQ I+R + G + +F Y +I ++T++E + Sbjct: 1162 VGLNLTA-ADYVYIVDPWWNPAVEQQAIDR-----THRIGQTKNIFAYRMICKDTVEEKI 1215 Query: 181 LQRLRTKSTIQDLLL 195 LQ K ++ ++ Sbjct: 1216 LQLQERKKSLVKEII 1230 >gi|315170383|gb|EFU14400.1| protein, SNF2 family [Enterococcus faecalis TX1342] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|315168675|gb|EFU12692.1| protein, SNF2 family [Enterococcus faecalis TX1341] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|116627171|ref|YP_819790.1| SNF2 family DNA/RNA helicase [Streptococcus thermophilus LMD-9] gi|116100448|gb|ABJ65594.1| Superfamily II DNA/RNA helicase, SNF2 family [Streptococcus thermophilus LMD-9] Length = 1031 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 23/206 (11%) Query: 5 HKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ L E S + Q+ + + + K+ +L ++ Sbjct: 815 QQMQQGLISASDQEINRRKVEILSGITRLRQICDTPALFMDYAG----DSGKLDSLRDLL 870 Query: 64 --EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPL 111 K + +++ F L + D + +N+G Sbjct: 871 SQIKESDHRVLIFSQFRGMLDITEELLQELGISSYKLTGSTPSDSRHEMTRAFNQGSRDA 930 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ ++R + G K+ V V+ LI Sbjct: 931 FLISLKAGGVGLNLT-GADTVILIDLWWNPAVEM-----QAISRAHRIGQKQNVEVFRLI 984 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ K + +L+ Sbjct: 985 TRGTIEEKILELQEGKKNLVTTVLDG 1010 >gi|315162049|gb|EFU06066.1| protein, SNF2 family [Enterococcus faecalis TX0645] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|257081744|ref|ZP_05576105.1| Snf2 family protein [Enterococcus faecalis E1Sol] gi|256989774|gb|EEU77076.1| Snf2 family protein [Enterococcus faecalis E1Sol] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|256616806|ref|ZP_05473652.1| Snf2 family protein [Enterococcus faecalis ATCC 4200] gi|256596333|gb|EEU15509.1| Snf2 family protein [Enterococcus faecalis ATCC 4200] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|15896547|ref|NP_349896.1| SNF2 family DNA/RNA helicase [Clostridium acetobutylicum ATCC 824] gi|15026382|gb|AAK81236.1|AE007827_4 Superfamily II DNA/RNA helicases, SNF2 family [Clostridium acetobutylicum ATCC 824] gi|325510706|gb|ADZ22342.1| Superfamily II DNA/RNA helicase, SNF2 family [Clostridium acetobutylicum EA 2018] Length = 1077 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 68/200 (34%), Gaps = 21/200 (10%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--AN 67 E + N S + Q+ E+ KI AL ++ Sbjct: 866 EKRVEYDEFNKSKIEILSYITRLRQICLDPSVVMEDYT---GGSAKINALIELLNHSIDE 922 Query: 68 AAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 I+V F S L +Q++NEG + Sbjct: 923 GHKILVFSQFTSVLKNIAERFREEKIKYSYLDGSINSKNRMNMVQDFNEGNNSVFLISLK 982 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL ++++ F WW+ +E R + G K V V L+A+ TI+ Sbjct: 983 AGGTGLNLTS-ADVVIHFDPWWNPA-----VEEQATDRAHRIGQKNIVEVIKLVAKGTIE 1036 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +++ K + D LL+ Sbjct: 1037 EKIIRLQEEKKRLVDSLLSE 1056 >gi|168180252|ref|ZP_02614916.1| helicase, Snf2 family [Clostridium botulinum NCTC 2916] gi|182668714|gb|EDT80692.1| helicase, Snf2 family [Clostridium botulinum NCTC 2916] Length = 1097 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + + L+ + S + QL +E K++ Sbjct: 877 KIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSLIIDEYK---GGSSKLRIAME 933 Query: 62 IIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGK 108 ++++ I++ F S L + + E+N Sbjct: 934 LVQEGVDEGKKILLFSQFISVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNSH 993 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ IE R + G K V V Sbjct: 994 VKVFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----IEDQATDRAHRIGQKNLVQVI 1047 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1048 KLVCKGTIEEKIIMLQEDKKELINNVMNS 1076 >gi|226948925|ref|YP_002804016.1| helicase, Snf2 family [Clostridium botulinum A2 str. Kyoto] gi|226844507|gb|ACO87173.1| helicase, Snf2 family [Clostridium botulinum A2 str. Kyoto] Length = 1097 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + + L+ + S + QL +E K++ Sbjct: 877 KIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSLIIDEYK---GGSSKLRIAME 933 Query: 62 IIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGK 108 ++++ I++ F S L + + E+N Sbjct: 934 LVQEGVDEGKKILLFSQFISVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNSH 993 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ IE R + G K V V Sbjct: 994 VKVFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----IEDQATDRAHRIGQKNLVQVI 1047 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1048 KLVCKGTIEEKIIMLQEDKKELINNVMNS 1076 >gi|70982085|ref|XP_746571.1| DNA repair protein Rhp26/Rad26 [Aspergillus fumigatus Af293] gi|66844194|gb|EAL84533.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus fumigatus Af293] gi|159122195|gb|EDP47317.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus fumigatus A1163] Length = 1214 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 68/219 (31%), Gaps = 28/219 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA------VYYDEEKHWKEVHDEKI 56 Y F + +++ ++ N + + + K+ Sbjct: 705 AYESFLKS--EEMESILKGRRQILYGVDILRKICNHPDLQNHKMQSHQSGYGNANKSGKM 762 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKDPCTIQ 102 + ++ ++ + ++ L ++ ++ + Sbjct: 763 QVVKSLLELWRDTGHKTLLFAQHRIMLDILEKFVRSLSGFNYRRMDGTTPIQNRQTMVDE 822 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ I + G G+NL G + ++ + W+ + R + G K Sbjct: 823 FNNDPNIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAWRLGQK 876 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R V VY L+ TI+E + R K + + +L K+ Sbjct: 877 RDVSVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 915 >gi|121714457|ref|XP_001274839.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus clavatus NRRL 1] gi|119402993|gb|EAW13413.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus clavatus NRRL 1] Length = 1221 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 71/222 (31%), Gaps = 32/222 (14%) Query: 2 KQYHKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HD 53 + Y F R ++ L+G ++ N + + +V Sbjct: 704 EAYETFLRSEDMQSILKG----RRQVLYGVDILRKICNHPDLQNHKLESHQVGYGNGNRS 759 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKDPC 99 K++ ++ ++ + ++ L ++ + Sbjct: 760 GKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILEKFVNSLSGFNHRRMDGTTPIQHRQAM 819 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N+ + + G G+NL G + ++ + W+ + R + Sbjct: 820 VDEFNNDPNLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAWRL 873 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 874 GQKREVSVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 915 >gi|149280534|ref|ZP_01886651.1| superfamily II DNA/RNA helicase, SNF2 family protein [Pedobacter sp. BAL39] gi|149228716|gb|EDM34118.1| superfamily II DNA/RNA helicase, SNF2 family protein [Pedobacter sp. BAL39] Length = 964 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 18/199 (9%) Query: 8 QRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +L + QLAN + DE E + + K Sbjct: 753 RNDLLSSMDDGTYAKKQVQLLQGLTALRQLANHPLMIDESYESDSGKFENVIHTLDNVLK 812 Query: 66 ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIPLLFAHP 116 +++ F L+ + F G T ++ + + + Sbjct: 813 -GGHKVLIFSQFVKHLSIFRNYFEKEQIPFSYLDGSTKNRGEIVAEFQENKDLKVFLISI 871 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + + WW+ QQ I+R + G + VF+Y IA++T+ Sbjct: 872 KAGGVGLNLTQ-ADYVFILDPWWNPAVEQQAIDR-----SHRIGQDKKVFIYKFIAKDTV 925 Query: 177 DELVLQRLRTKSTIQDLLL 195 +E +L K T+ + L+ Sbjct: 926 EEKILALQNRKKTLANALI 944 >gi|251778792|ref|ZP_04821712.1| SWI/SNF family helicase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083107|gb|EES48997.1| SWI/SNF family helicase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 1086 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 77/211 (36%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y ++ ++L + S K Q+ E KI A Sbjct: 864 KTYSEYAKDLIQKKVEDDEFKNSKIEILSYITKLRQICLDPSVIMENYLGT---SGKIDA 920 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNE 106 L I++ + + I+V F S L L + + ++NE Sbjct: 921 LLEILDHSISSGHKILVFSQFTSVLKNIGNLLKENNILFSYLDGSVSSINRMRMVDDFNE 980 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL +I++ F WW+ +E R + G + V Sbjct: 981 GENNVFLVSLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQATDRAHRIGQENTVE 1034 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIAQ TI+E +++ +K + D +L Sbjct: 1035 VIKLIAQGTIEEKIVELQDSKRKLIDTILGD 1065 >gi|315148655|gb|EFT92671.1| protein, SNF2 family [Enterococcus faecalis TX4244] Length = 1065 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 26/216 (12%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ V Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKKVV 1012 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V+ +IA+ T++E + + K + ++ +++ Sbjct: 1013 EVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQ 1048 >gi|296813433|ref|XP_002847054.1| DNA repair and recombination protein RAD26 [Arthroderma otae CBS 113480] gi|238842310|gb|EEQ31972.1| DNA repair and recombination protein RAD26 [Arthroderma otae CBS 113480] Length = 1233 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 71/224 (31%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGA--------VYYDEEKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 675 KVQRAAYEAFLASGEMSSILRGRREALYGIDMLRKICNHPDLTQHKTLSLKTDYNYGSGA 734 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDK-DP 98 K++ ++ ++ + ++ L R G T K Sbjct: 735 KSGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDILERFIRGFDRFNYRRMDGNTPIKVRQ 794 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N + + + G G+NL G + ++ + W+ + R Sbjct: 795 TMVDEFNNDPSLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAW 848 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 849 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 892 >gi|227501655|ref|ZP_03931704.1| helicase [Corynebacterium accolens ATCC 49725] gi|227077680|gb|EEI15643.1| helicase [Corynebacterium accolens ATCC 49725] Length = 1009 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 76/218 (34%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y E+ L+ + + + Q+ N +Y + + K+ Sbjct: 778 LYKALVNEVKKSLEDATGISKRGIVLASLTRIKQICNHPAHYLGDDSPVVIKGKHRSGKV 837 Query: 57 KALEVIIE--KANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 K L I++ + +++ + + L G T +K +++ Sbjct: 838 KELMRIVDAATESGERLLIFTQYKAFGDILQPYLSGQLGHEIPFLHGGVTKNKRDQMVED 897 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + + G GLNL +I+V WW+ +E R + G + Sbjct: 898 FQADDGPQAMILSLKAGGTGLNLTA-ASIVVHMDRWWNPA-----VENQATDRAFRIGQR 951 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V VY +I T++E + L K+ + ++ + Sbjct: 952 RNVQVYKMITAGTLEESIQDILDGKTQLAGAVVGEGEG 989 >gi|315303447|ref|ZP_07874044.1| DNA/RNA helicase protein [Listeria ivanovii FSL F6-596] gi|313628192|gb|EFR96728.1| DNA/RNA helicase protein [Listeria ivanovii FSL F6-596] Length = 1072 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 82/210 (39%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + ++ DL+ + A + + Q+ + E + K+ Sbjct: 845 IYLAYLEKIQADLEESSGNASEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQ 901 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQ---------KAFPQGRTLDK-DPCTIQEWNE 106 L I+ + N I++ F LA ++ + G+T + + +NE Sbjct: 902 LFDTIQTARENGKRILIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPSRTRLDMVNSFNE 961 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL G + ++ + LWW+ +E R + G KR V Sbjct: 962 GENDIFLISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQ 1015 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ +I + TI+E + + K + D L+ Sbjct: 1016 VFRMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|283456215|ref|YP_003360779.1| helicase [Bifidobacterium dentium Bd1] gi|283102849|gb|ADB09955.1| Helicase [Bifidobacterium dentium Bd1] Length = 1274 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDL-----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L N ++ +L + K+ Sbjct: 1052 KLYAAHEQRLRAALTKTRDADFNTSRIRILAEFTLLRELCCDPRLVYADAKN---GSAKL 1108 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW 104 +A++ ++ +++ F S L + A K + E+ Sbjct: 1109 EAIDDLVANCMDEGKKVLIFSQFTSFLDLIGVRLAEHGVAFHAITGETPKRKRVELVDEF 1168 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P+ + GLNL G ++++ WW+ + + R + G + Sbjct: 1169 NGDDAPVFLISLKAGNTGLNL-VGASVVIHADPWWN-----EAAQNQATDRAHRIGQTQD 1222 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ R KS + + Sbjct: 1223 VNVYRIVAKDTIEERMLKLQRDKSRLARQFTDG 1255 >gi|171742723|ref|ZP_02918530.1| hypothetical protein BIFDEN_01837 [Bifidobacterium dentium ATCC 27678] gi|171278337|gb|EDT45998.1| hypothetical protein BIFDEN_01837 [Bifidobacterium dentium ATCC 27678] Length = 1283 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDL-----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L N ++ +L + K+ Sbjct: 1061 KLYAAHEQRLRAALTKTRDADFNTSRIRILAEFTLLRELCCDPRLVYADAKN---GSAKL 1117 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW 104 +A++ ++ +++ F S L + A K + E+ Sbjct: 1118 EAIDDLVANCMDEGKKVLIFSQFTSFLDLIGVRLAEHGVAFHAITGETPKRKRVELVDEF 1177 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N P+ + GLNL G ++++ WW+ + + R + G + Sbjct: 1178 NGDDAPVFLISLKAGNTGLNL-VGASVVIHADPWWN-----EAAQNQATDRAHRIGQTQD 1231 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ R KS + + Sbjct: 1232 VNVYRIVAKDTIEERMLKLQRDKSRLARQFTDG 1264 >gi|149639471|ref|XP_001508174.1| PREDICTED: similar to hCG32740 [Ornithorhynchus anatinus] Length = 968 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 75/231 (32%), Gaps = 41/231 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY----------------D 43 + Y F +E+Y L GE + ++ N + + Sbjct: 410 EVYQNFIDSKEVYSILSGE----MQIFPGLMALRKMCNHPDLFSGGPKILKNVPDDELEE 465 Query: 44 EEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQG 91 E++ K+ +E ++ +++ L L+ Sbjct: 466 EDQFGYWKRSGKMIVVESLLKIWHKQGHRVLLFSQSRQMLHILEVFLRGQKYSYLKMDGT 525 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T+ I +N + I + G G+NL G N ++ + W+ + Sbjct: 526 TTIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLT-GANRVIIYDPDWNPST-----DT 579 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G KR V VY L+ TI+E + R K + + +L K+ Sbjct: 580 QARERAWRIGQKRQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 630 >gi|288555411|ref|YP_003427346.1| helicase Snf2 family [Bacillus pseudofirmus OF4] gi|288546571|gb|ADC50454.1| helicase Snf2 family [Bacillus pseudofirmus OF4] Length = 1064 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 70/219 (31%), Gaps = 27/219 (12%) Query: 2 KQYHKFQRELYCDLQGENIE------AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++L D+ + K Q+ EE EV K Sbjct: 841 KYYLAQVKQLRSDVDDAISSDQFQKKRIEILAGLTKLRQICCHPRLVSEED---EVESGK 897 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQE 103 + L +E+ +++ F S LA + + Sbjct: 898 LLRLMEYVEEGMEAGQRMVIFSQFTSMLAIIRAEFEERGWEFFYLDGQTPAVERLRLADQ 957 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G+ L G GG+ ++ + WW+ IE R + G + Sbjct: 958 FNQGEKSLFLVSLK-AGGTGLNLTGGDTVILYDTWWNPA-----IEEQAADRVYRFGQTK 1011 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V V LIA TI+E +L K + D ++ + + Sbjct: 1012 NVQVIKLIANGTIEEKILALHEKKKALVDAVIQPGEAQM 1050 >gi|330932428|ref|XP_003303771.1| hypothetical protein PTT_16121 [Pyrenophora teres f. teres 0-1] gi|311319996|gb|EFQ88126.1| hypothetical protein PTT_16121 [Pyrenophora teres f. teres 0-1] Length = 1250 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 28/192 (14%) Query: 32 CLQLANGAVYYDEEKHWKEV--------HDEKIKALEVII--EKANAAPIIVAYHFNSDL 81 ++ N + + K+ K++ ++ ++ K ++ L Sbjct: 728 LRKICNHPDLTEHKTLSKKPGYDYGNPNRSGKMQVVKELLSLWKKGGHKTLLFAQHRIML 787 Query: 82 ARLQ----------KAFPQGRTLDK-DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGG 129 LQ G T K + E+N + + G G+NL G Sbjct: 788 DILQKFVSQLPDINWRRMDGETPIKDRQNLVDEFNNSPDLHVFLLTTKVGGLGVNLT-GA 846 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 N ++ + W+ + R + G KR V +Y L++ TI+E + R K Sbjct: 847 NRVIIYDPDWNPST-----DIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQF 901 Query: 190 IQDLLLNALKKE 201 + + +L K+ Sbjct: 902 LTNKVLKDPKQR 913 >gi|42520462|ref|NP_966377.1| SNF2 family helicase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410201|gb|AAS14311.1| helicase, SNF2 family [Wolbachia endosymbiont of Drosophila melanogaster] Length = 1175 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 72/213 (33%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K ++ Q+ N + ++K K++ LE Sbjct: 948 LYQKVVDTTMEKIEKSEGIERKGLIFKLINALKQICNHPSQFGKKKRASIEQSGKMQMLE 1007 Query: 61 VIIEKANA--APIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNE- 106 I+ ++ + G + I ++ Sbjct: 1008 EILISIGEVAEKSLIFTQYTEMGEIIARLLEERFESEVPFLHGGLSRKARDTMINDFQNL 1067 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L + G GLNL N ++ + LWW+ +E R + G +R V Sbjct: 1068 FQSNILIVSLKAGGTGLNLTA-ANHVIHYDLWWNPA-----VEAQATDRAYRIGQERNVM 1121 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L++ T +E + + +++K + +L +++ + Sbjct: 1122 VYRLLSTGTFEERIDEMIQSKKELANLTISSGE 1154 >gi|326797956|ref|YP_004315775.1| SNF2-related protein [Sphingobacterium sp. 21] gi|326548720|gb|ADZ77105.1| SNF2-related protein [Sphingobacterium sp. 21] Length = 1121 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 83/213 (38%), Gaps = 22/213 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y +++E + + E + ++ Q+ N + ++ + Sbjct: 897 RIYDVYEKEFRSYISAQTEEELSNKSAVVLKGLMRLRQICNSPLLLKDKYSNVPNAAKIE 956 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN- 105 +E I +++ I++ + L ++ + + I+++ Sbjct: 957 WLIEEIGQRSVQHKILLFSQYVHMLDLVEDQLHKQGLQTLKMTGSTKVKDREGLIEQFKL 1016 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G++ + G GLNL + + WW+ Q I+RI + G K+ V Sbjct: 1017 DGRVKVFLMSLKVGGVGLNLTE-ADYVYLIDPWWNPAVEDQAIDRI-----YRMGQKKNV 1070 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 LI + TI+E VLQ ++KS + L++++ Sbjct: 1071 IAVRLICKETIEEKVLQLQQSKSELFTKLIDSI 1103 >gi|313632979|gb|EFR99905.1| DNA/RNA helicase protein [Listeria seeligeri FSL N1-067] Length = 1071 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 21/204 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L + E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLAESNGNASEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N +++ F LA ++ + +NEG+ + Sbjct: 908 TARENGKRLLIFSQFTGMLAIIRRKLEEDGQTFFYMDGKTPAKTRLDMVNSFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + + K + D L+ Sbjct: 1022 KGTIEERIFDLQKKKQALVDELIQ 1045 >gi|302652597|ref|XP_003018145.1| hypothetical protein TRV_07841 [Trichophyton verrucosum HKI 0517] gi|291181757|gb|EFE37500.1| hypothetical protein TRV_07841 [Trichophyton verrucosum HKI 0517] Length = 1240 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYD--------EEKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 690 KVQRAAYEAFLASGEMSSILRGRREALYGIDMLRKICNHPDLTQHKILSTKTDYNYGSGA 749 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDK-DP 98 K++ ++ ++ K ++ L L+ G T K Sbjct: 750 KSGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKVRQ 809 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N + + + G G+NL G + ++ + W+ + R Sbjct: 810 SMVDEFNNDPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAW 863 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 864 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 907 >gi|256425205|ref|YP_003125858.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] gi|256040113|gb|ACU63657.1| SNF2-related protein [Chitinophaga pinensis DSM 2588] Length = 959 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 77/214 (35%), Gaps = 26/214 (12%) Query: 2 KQYHKF----QRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y++ + +L + + A + Q+ N ++E H K Sbjct: 736 KSYNRIRDMYKEKLLKQINESGMAASTIYVLEGLTRLRQICNAPQLVEQESHVT--SSVK 793 Query: 56 IKALEVIIEKANA-APIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 + L I + ++V F L + K+ + +Q++ Sbjct: 794 LDELMREISENTGAHKVLVFSQFTGMLQLIAKSMEGEGLPFLYLDGSTKAENRQQLVQQF 853 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + ++ + + G GL L + + WW+ QQ I+R + G + Sbjct: 854 QTDEQVRVFLISLKAGGVGLTLTA-ADYVYLVDPWWNPAAEQQAIDR-----THRIGQQN 907 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VF Y +I +++++E +L K I D L++ Sbjct: 908 KVFAYKMICKDSVEEKILALQERKKMIADDLISE 941 >gi|325956842|ref|YP_004292254.1| Non-specific serine/threonine protein kinase [Lactobacillus acidophilus 30SC] gi|325333407|gb|ADZ07315.1| Non-specific serine/threonine protein kinase [Lactobacillus acidophilus 30SC] Length = 1179 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 88/226 (38%), Gaps = 34/226 (15%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 YH ++ L G++ + F ++ K ++ + H +K+K Sbjct: 958 LYHLQMNKIIAQLNGQDDDDFKKFRFQILAQITKLREICCDPHLLYDNYH---GKSDKLK 1014 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 A +I+ N I++ F S L +K IQ +N Sbjct: 1015 ATIDLIKSNLENGHKILLFSQFTSMLDILQEKLAKLKVPTFMLTGSTPKEKRQEDIQHFN 1074 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K P + + G G+NL ++++ + WW++ E R + G K + Sbjct: 1075 SLKQPGVFLISLKAGGTGINLTS-ADVVIHYDPWWNIAA-----ENQATDRAHRIGQKNS 1128 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-------ALKKETI 203 V +Y ++ Q+T++E +++ + K+ + +LN A+ +E + Sbjct: 1129 VKIYKMVTQDTVEERIIKLQQKKAELAQAILNNKDMANAAMNREDL 1174 >gi|116873076|ref|YP_849857.1| DNA/RNA helicase protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741954|emb|CAK21078.1| DNA/RNA helicase protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 1072 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 77/210 (36%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + ++ DL+ N A + + Q+ + E + K+ Sbjct: 845 IYLAYLEKIQADLEESNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQ 901 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE 106 L I+ + N I++ F LA ++ + +NE Sbjct: 902 LFDTIQTARENGKRILIFSQFTGMLAIIRRKLEEEGHSLFYMDGKTPAKTRLDMVNAFNE 961 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL G + ++ + LWW+ +E R + G KR V Sbjct: 962 GENDIFLISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQ 1015 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ +I + TI+E + + K + D L+ Sbjct: 1016 VFRMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|332173366|gb|AEE22620.1| SNF2-related protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1440 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 63/208 (30%), Gaps = 23/208 (11%) Query: 4 YHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + ++ A ++ VK Q + Sbjct: 1218 YEALRLNAIDNINQSGQHANASEQRIRMLAELVKLRQACCNPKLVM-AETTIPSAKLAAL 1276 Query: 58 ALEVIIEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 + K N ++ F D + + ++ + G Sbjct: 1277 DALLEELKLNNHKALIFSQFVGHLQLIKQHLEDKGFDYQYLDGSTPQKQRQASVNAFQRG 1336 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL + ++ WW+ +E R + G R V + Sbjct: 1337 QGDIFLISLKAGGSGLNLTA-ADYVIHMDPWWNPA-----VEEQASDRAHRIGQLRPVTI 1390 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y LI QNTI+E ++ + K + D LL Sbjct: 1391 YRLITQNTIEEKIVALHKQKRDLADNLL 1418 >gi|67541879|ref|XP_664707.1| hypothetical protein AN7103.2 [Aspergillus nidulans FGSC A4] gi|40742118|gb|EAA61308.1| hypothetical protein AN7103.2 [Aspergillus nidulans FGSC A4] gi|259483574|tpe|CBF79076.1| TPA: DNA repair protein Rhp26/Rad26, putative (AFU_orthologue; AFUA_4G03840) [Aspergillus nidulans FGSC A4] Length = 1193 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 32/222 (14%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGA------VYYDEEKHWKEVHD 53 + Y F E+ L+G ++ N + Y + + Sbjct: 680 QAYEAFLGSEEMQSILRG----RRQVLYGVDILRKICNHPDLQNHKLLYAKPNYGNPTKS 735 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARL-----------QKAFPQGRTLDKDPCT 100 K++ + ++ K ++ L L + + Sbjct: 736 GKMQVVRSLLELWKETGHKTLLFAQHRIMLDILEKFVKSLSGFNYRRMDGTTPIQHRQTM 795 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+N + + + G G+NL G + ++ + W+ + R + Sbjct: 796 VDEFNKDPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAWRL 849 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 850 GQKRDVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 891 >gi|240170156|ref|ZP_04748815.1| SNF2-related protein [Mycobacterium kansasii ATCC 12478] Length = 1077 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 69/212 (32%), Gaps = 22/212 (10%) Query: 3 QYHK-FQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y K QRE L F Q+A + + KI Sbjct: 859 LYDKRLQRERQKVLGLLDDIQRNRFTILKSLTVLRQMALHPGLV--DAAHDALVCAKIDV 916 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGK 108 L + +V F L R++ P IQ++ EG Sbjct: 917 LVEQLRDVADGGHRALVFSQFTRFLGRVRDRLGAEGIDYCYLDGRTRNRPKVIQQFKEGT 976 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P+ + G GLNL + WW+ Q ++R + G +R V VY Sbjct: 977 APVFLISLKAGGFGLNLTE-ADYCFLLDPWWNPATETQAVDR-----THRIGQQRNVMVY 1030 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LIA++TI+ V+ K+ + +++ Sbjct: 1031 RLIARDTIEAKVMALNARKAKLFASVIDDGNA 1062 >gi|289619967|emb|CBI53411.1| unnamed protein product [Sordaria macrospora] Length = 1172 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 33/222 (14%) Query: 8 QRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEV-------HDE 54 QRE Y L+ +++ A S ++ N D Sbjct: 671 QREAYELFLKSDDMTAILNRTRQSLYGIDILRKICNHPDLLDPRLKDDPSYQWGSTNKSG 730 Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTI 101 K+ ++ ++ K ++ L ++ + + Sbjct: 731 KMAVVKSLLPMWKRLGHKTLLFCQGTQMLDIIEAFVRRQDGINYLRMDGKTPVKDRQTLV 790 Query: 102 QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N + + G G NL G N ++ F W+ + R + G Sbjct: 791 DQFNNNPDLHIFLLTTKVGGLGTNLT-GANRVIIFDPDWNPST-----DVQARERAWRLG 844 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 K+ V +Y L+ TI+E + R K + + +L K++T Sbjct: 845 QKKEVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQT 886 >gi|300771567|ref|ZP_07081442.1| Snf2 family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761556|gb|EFK58377.1| Snf2 family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 960 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 68/211 (32%), Gaps = 26/211 (12%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y K + E L K QLAN E + K Sbjct: 739 ETYEKVKSEYRNALLNVNTEDKAKTSQITLLQGLTKLRQLANHP---KMIDDDFEGNSGK 795 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEW 104 + +E +++ F L+ + F G T ++ + Sbjct: 796 FDLVLETLESVLHVGNKVLIFSQFVKQLSIFRTYFEEKGIQYAYLDGATKNRSEAVAEFQ 855 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 L + G GLNL + + WW+ QQ ++R + G R+ Sbjct: 856 KNKNTKLFLISIKAGGVGLNL-IEADYVFILDPWWNPAVEQQAVDR-----SHRIGQTRS 909 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF+Y I ++T++E +L K I L+ Sbjct: 910 VFIYKFITKDTVEEKILAMQNRKRGIAKSLI 940 >gi|227535766|ref|ZP_03965815.1| SNF2 family superfamily II DNA/RNA helicase [Sphingobacterium spiritivorum ATCC 33300] gi|227244254|gb|EEI94269.1| SNF2 family superfamily II DNA/RNA helicase [Sphingobacterium spiritivorum ATCC 33300] Length = 960 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 68/211 (32%), Gaps = 26/211 (12%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y K + E L K QLAN E + K Sbjct: 739 ETYEKVKSEYRNALLNVNTEDKAKTSQITLLQGLTKLRQLANHP---KMIDDDFEGNSGK 795 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEW 104 + +E +++ F L+ + F G T ++ + Sbjct: 796 FDLVLETLESVLHVGNKVLIFSQFVKQLSIFRTYFEEKGIQYAYLDGATKNRSEAVAEFQ 855 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 L + G GLNL + + WW+ QQ ++R + G R+ Sbjct: 856 KNKNTKLFLISIKAGGVGLNL-IEADYVFILDPWWNPAVEQQAVDR-----SHRIGQTRS 909 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VF+Y I ++T++E +L K I L+ Sbjct: 910 VFIYKFITKDTVEEKILAMQNRKRGIAKSLI 940 >gi|325118047|emb|CBZ53598.1| hypothetical protein NCLIV_033850 [Neospora caninum Liverpool] Length = 1613 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 82/221 (37%), Gaps = 36/221 (16%) Query: 6 KFQRELYCDLQGENIEAFNSAS--------KTVKCLQLANGAVYYDE--------EKHWK 49 K Q++LY D+ +N+E N+ S ++ + N +D E Sbjct: 458 KLQKKLYADILSKNVEVLNAMSGSKTQMLNILMQLRKCCNHPYLFDGVEPGPPYVEGEHM 517 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 K+ L+ ++ KA + +++ L + G + Sbjct: 518 VEAAGKMALLDKLLPRLKAEGSRVLLFSQMTRLLDIVDDYCRWRGFDYCRIDGGTPGTER 577 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N L + G G+NL ++++ F ++ + ++ + R Sbjct: 578 QERIDEFNAEGSSKFLFLLSTRAGGLGINL-ATADVVILFDSDFNPQ-----MDLQAMDR 631 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V VY + +T++ +++R K + L++ Sbjct: 632 AHRIGQKKRVVVYRFVTGDTVEAKIVERAAKKLKLDSLVIQ 672 >gi|327441412|dbj|BAK17777.1| superfamily II DNA/RNA helicase, SNF2 family [Solibacillus silvestris StLB046] Length = 925 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 74/215 (34%), Gaps = 25/215 (11%) Query: 4 YHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYY----DEEKHWKEVHDEKIK 57 Y + ++ L+ + K QL N + E+ + K+K Sbjct: 695 YEGYIQDTLATLEELTGFEKKGRILKMLNKLKQLCNHPALFLKEPFEDANTMVSRSVKLK 754 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 + + ++ N ++ + +Q + ++ + ++ Sbjct: 755 RIIEMTKEIIDNGEQCLIFTQYIGMGNLIQHCLTELYNVEVPFLTGSMPKNQRDNLVDQF 814 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G+ P+ + G GLNL ++ WW+ +E R + G + Sbjct: 815 QAGEFPVFLLSLKAGGTGLNLTA-ATHVLHADRWWNPA-----VENQATDRAYRIGQTQF 868 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ + TI+E + + + KS + + L+ + K Sbjct: 869 VQVHKFVTIGTIEEKIDKMIAMKSALSEELIQSSK 903 >gi|327277378|ref|XP_003223442.1| PREDICTED: probable global transcription activator SNF2L1-like [Anolis carolinensis] Length = 1049 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 404 VKIYLGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 463 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + ++V L L+ Sbjct: 464 PPYTTDTHLVTNSGKMVALDKLLSKLKEQGSRVLVFSQMTRLLDILEDYCMWRGYEYCRL 523 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 524 DGQTPHEEREEAIDTFNAPNSRKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 578 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 579 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 630 >gi|308067058|ref|YP_003868663.1| Hypothetical helicase [Paenibacillus polymyxa E681] gi|305856337|gb|ADM68125.1| Hypothetical helicase [Paenibacillus polymyxa E681] Length = 987 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 73/238 (30%), Gaps = 41/238 (17%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHW------------ 48 Y + +EL +Q S + QL + +E Sbjct: 740 LYDQIVKELMERMQKLEGIERKGAILSALTQLKQLCDHPALLTKEAPPDTAASGYSPSDL 799 Query: 49 --KEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-----------SDLARLQKAFPQGRT 93 K++ + ++++ ++ + +L + Sbjct: 800 EAVISRSSKLERILAMVKELREEGERCLIFTQYIGMGQMLQRVLAQELQEPVLYLNGSTS 859 Query: 94 LDKDPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I ++ +P + + G GLNL N + F WW+ Sbjct: 860 KTARDRMIDQFQSHTLPPAEQPSVFILSLKAGGVGLNLTA-ANHVFHFDRWWNPA----- 913 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +E R + G + V V+ I+ T++E + + L +K + D ++ + + + Sbjct: 914 VENQATDRAYRMGQTKDVQVHKFISLGTLEERIDEMLESKQQLSDQIITSTEGWITEL 971 >gi|312196824|ref|YP_004016885.1| SNF2-related protein [Frankia sp. EuI1c] gi|311228160|gb|ADP81015.1| SNF2-related protein [Frankia sp. EuI1c] Length = 1282 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 70/210 (33%), Gaps = 22/210 (10%) Query: 2 KQYH-KFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + QRE L N QL+ A D+ + + KI Sbjct: 1063 RLYQTQLQRERQKVLGLVNDLNRNRLTILRSLTLLRQLSLHAGLVDDGQAR--LPSAKID 1120 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEG 107 L + +V F L +++ + ++ + G Sbjct: 1121 TLLEQLTHVVAGGHRALVFSQFTGFLGKVRAELGDAGVEYCYLDGRTRDRADVVERFRSG 1180 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 K + + G GLNL + WW+ E V R + G R V V Sbjct: 1181 KASVFLISLKAGGFGLNLTE-ADYCFLLDPWWNPAT-----EAQAVDRTHRIGQTRNVLV 1234 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI+E V+ K+ + +++ Sbjct: 1235 YRLVARDTIEEKVMALKARKARLFSGVIDD 1264 >gi|225630349|ref|YP_002727140.1| helicase, SNF2 family [Wolbachia sp. wRi] gi|225630743|ref|YP_002727534.1| helicase, SNF2 family [Wolbachia sp. wRi] gi|225592330|gb|ACN95349.1| helicase, SNF2 family [Wolbachia sp. wRi] gi|225592724|gb|ACN95743.1| helicase, SNF2 family [Wolbachia sp. wRi] Length = 1175 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 72/213 (33%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K ++ Q+ N + ++K K++ LE Sbjct: 948 LYQKVVDTTMEKIEKSEGIERKGLIFKLINALKQICNHPSQFGKKKRASIEQSGKMQMLE 1007 Query: 61 VIIEKANA--APIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNE- 106 I+ ++ + G + I ++ Sbjct: 1008 EILISIGEVAEKSLIFTQYTEMGEIIARLLEERFESEVPFLHGGLSRKARDTMINDFQNL 1067 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L + G GLNL N ++ + LWW+ +E R + G +R V Sbjct: 1068 FQSNILIVSLKAGGTGLNLTA-ANHVIHYDLWWNPA-----VEAQATDRAYRIGQERNVM 1121 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L++ T +E + + +++K + +L +++ + Sbjct: 1122 VYRLLSTGTFEERIDEMIQSKKELANLTISSGE 1154 >gi|86741104|ref|YP_481504.1| SNF2-related [Frankia sp. CcI3] gi|86567966|gb|ABD11775.1| SNF2-related [Frankia sp. CcI3] Length = 1163 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 76/207 (36%), Gaps = 19/207 (9%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + +R+ L N F QL+ A D+ H ++ KI AL Sbjct: 947 QTYLQRERQKVLGLVDDMNRNRFTILRSLTLLRQLSLHAGLVDD--HHADLPCAKIDALF 1004 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIP 110 + + +V F L ++++ ++ + G P Sbjct: 1005 EQLTDVVDSGHRALVFSQFTGFLGKVRERLSALGVEHCYLDGRTRDRSTVLERFKTGSAP 1064 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL + WW+ +Q ++R + G R V VY L Sbjct: 1065 VFLVSLKAGGFGLNLTE-ADYCFLLDPWWNPATEEQAVDR-----THRIGQSRNVMVYRL 1118 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 +A++TI+E V+ K+ + +++ Sbjct: 1119 VARDTIEEKVMAMKDRKARLFSSVMDD 1145 >gi|302509748|ref|XP_003016834.1| hypothetical protein ARB_05127 [Arthroderma benhamiae CBS 112371] gi|291180404|gb|EFE36189.1| hypothetical protein ARB_05127 [Arthroderma benhamiae CBS 112371] Length = 1220 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 71/224 (31%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYD--------EEKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 670 KVQRAAYEAFLASGEMSSILRGRREALYGIDMLRKICNHPDLTQHKILSTKTDYNYGSGA 729 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDK-DP 98 K++ ++ ++ K ++ L L+ G T K Sbjct: 730 KSGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKVRQ 789 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N + + G G+NL G + ++ + W+ + R Sbjct: 790 SMVDEFNNNPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAW 843 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 844 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 887 >gi|194206164|ref|XP_001500332.2| PREDICTED: similar to DNA excision repair protein ERCC-6 (ATP-dependent helicase ERCC6) (Cockayne syndrome protein CSB) [Equus caballus] Length = 1461 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 70/213 (32%), Gaps = 29/213 (13%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y F +E+Y L G+ S V ++ N Y+ V Sbjct: 766 KVYQNFIDSKEVYGILNGD----MQVFSGLVALRKICNHPGYWKRSGKMIVVES------ 815 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWN-EGK 108 + I +++ L L+ T+ I +N + Sbjct: 816 LLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTVASRQPLITRYNEDTS 875 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I + G G+NL G N ++ + W+ + R + G K+ V VY Sbjct: 876 IFVFLLTTRVGGIGVNLT-GANRVIIYDPDWNPST-----DTQARERAWRIGQKKQVTVY 929 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 L+ TI+E + R K + + +L K+ Sbjct: 930 RLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 962 >gi|325685916|gb|EGD27981.1| non-specific serine/threonine protein kinase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 1185 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 74/215 (34%), Gaps = 28/215 (13%) Query: 2 KQYHK----FQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + ++ + E + + ++ E+ + EK Sbjct: 962 KLYDAEIARLKNKVMAEDDEGIKREQIEILAALTRIREICCDPGLLYEDYKGE---SEKR 1018 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW 104 A +I+ +++ F S L L++ + + + Sbjct: 1019 LACVDLIKSAIDGGHKVLLFSQFTSMLDLLEESLKAEEIGFLRIDGQTPKARRLTLVNVF 1078 Query: 105 N--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N + + + G GLNL G + ++ + WW++ R + G + Sbjct: 1079 NHKDSPAKVFLISLKAGGTGLNLT-GADTVIHYDPWWNVAAQ-----NQATDRAHRIGQE 1132 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LIA++T++E +L K + +L A Sbjct: 1133 KKVTVYKLIAKDTVEEAILDLQEAKRQLAQGILTA 1167 >gi|169610587|ref|XP_001798712.1| hypothetical protein SNOG_08399 [Phaeosphaeria nodorum SN15] gi|160702104|gb|EAT84675.2| hypothetical protein SNOG_08399 [Phaeosphaeria nodorum SN15] Length = 1203 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 65/192 (33%), Gaps = 28/192 (14%) Query: 32 CLQLANGAVYYDEEKHWKEV--------HDEKIKALEVII--EKANAAPIIVAYHFNSDL 81 ++ N + + K+ K++ ++ ++ K ++ L Sbjct: 694 LRKICNHPDLTEHKTLSKQPGYDYGAPNKSGKMQVVKELLSLWKKGGHKTLLFAQHRIML 753 Query: 82 AR------------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 ++ + ++ + N+ + + G G+NL G Sbjct: 754 DILQKFLDHIPEINYRRMDGETAIKNRQDLVDEFNNDPNLHVFLLTTKVGGLGVNLT-GA 812 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 N ++ + W+ + R + G KR V +Y L++ TI+E + R K Sbjct: 813 NRVIIYDPDWNPST-----DIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQF 867 Query: 190 IQDLLLNALKKE 201 + + +L K+ Sbjct: 868 LTNKVLKDPKQR 879 >gi|326523023|dbj|BAJ88557.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1220 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 70/221 (31%), Gaps = 30/221 (13%) Query: 5 HKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVH------D 53 + + L +E NS ++ N + E+ + Sbjct: 688 QEQRATYRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLLEREQAAQNPDYGNIERS 747 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTI 101 K+K +E I+ K +++ L + + I Sbjct: 748 GKMKVVEQILKVWKDQGHRVLLFAQTQQMLDILESFLTARDYQYRRMDGLTPPKQRMALI 807 Query: 102 QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N +I + G G NL G N ++ F W+ R + G Sbjct: 808 DEFNNTDEIFIFILTTKVGGLGTNLT-GANRVIIFDPDWNPSTDM-----QARERAWRIG 861 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 KR V VY LI + TI+E V R K + + +L ++ Sbjct: 862 QKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQR 902 >gi|194381160|dbj|BAG64148.1| unnamed protein product [Homo sapiens] Length = 863 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 76/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 K Y F +E+Y L GE S + ++ N + +E Sbjct: 144 KVYQNFVDSKEVYRILNGE----MQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEE 199 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 200 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTT 259 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I +N + I + G G+NL G N +V + W+ + Sbjct: 260 TIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPST-----DTQ 313 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 314 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 363 >gi|104782726|ref|YP_609224.1| Snf2/Rad54 family helicase [Pseudomonas entomophila L48] gi|95111713|emb|CAK16437.1| helicase, SNF2/RAD54 family [Pseudomonas entomophila L48] Length = 1108 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 70/208 (33%), Gaps = 19/208 (9%) Query: 6 KFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDE---EKHWKEVHDEKIKALE 60 +++ ++ G +K Q+ + + + Sbjct: 884 AMDKKVREEIARSGAARSQIVILDALLKLRQVCCDLRLVKGTEIKGTFADKGKLGSLLEM 943 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNEGKIPLL 112 + + +++ F S LA ++ + +Q++ G+ + Sbjct: 944 LEELLSEGRKVLLFSQFTSMLALIEFELEKRGVRYSLLTGDTRDRRAPVQQFQNGESDVF 1003 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ + WW+ E R + G + VFV+ LI Sbjct: 1004 LISLKAGGTGLNLTA-ADTVIHYDPWWNPAS-----ENQATDRAYRIGQDKPVFVFKLIT 1057 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKK 200 + T++E + + K+ + LL+ + Sbjct: 1058 RGTVEEKIQLLQQEKAALAAGLLDGGQA 1085 >gi|300771853|ref|ZP_07081724.1| Snf2 family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761239|gb|EFK58064.1| Snf2 family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 1119 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 77/206 (37%), Gaps = 18/206 (8%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K RE +G+ I K Q+ N E E + KI+ L Sbjct: 900 LYEKEFREFISATEGDEIRKSPMYVLKGLTKLRQICNSTKLLKTEDLSTEDNSAKIETLI 959 Query: 61 V-IIEKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKIP 110 I + IIV F S L +QK + G+T ++D + Sbjct: 960 EQIEDNIAYHKIIVFSQFVSMLQLIQKALSAKGIDASMLTGKTKNRDQVVHNFQQQEDNR 1019 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL +++ WW+ +E + R + G ++ V L Sbjct: 1020 VFLISLKAGGTGLNLTA-ASLVYLVDPWWNPA-----VENQAIDRAYRIGQQQTVTAVRL 1073 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 I +T++E +++ ++K+ + L+ Sbjct: 1074 ITPDTVEEKMIKMQQSKNELASALIG 1099 >gi|148379559|ref|YP_001254100.1| helicase, Snf2 family [Clostridium botulinum A str. ATCC 3502] gi|153931492|ref|YP_001383937.1| SNF2 family helicase [Clostridium botulinum A str. ATCC 19397] gi|153937278|ref|YP_001387483.1| SNF2 family helicase [Clostridium botulinum A str. Hall] gi|148289043|emb|CAL83133.1| putative helicase [Clostridium botulinum A str. ATCC 3502] gi|152927536|gb|ABS33036.1| helicase, Snf2 family [Clostridium botulinum A str. ATCC 19397] gi|152933192|gb|ABS38691.1| helicase, Snf2 family [Clostridium botulinum A str. Hall] Length = 1097 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + + + L+ + S + QL +E K++ Sbjct: 877 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK---GGSSKLRIAME 933 Query: 62 IIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN-EGK 108 ++++ I++ F S L + + ++N Sbjct: 934 LVQEGVDEGKKILLFSQFTSVLKNISKLLKKECIEYFYLDGSTNASERIKLVDKFNKNSH 993 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ +E R + G K V V Sbjct: 994 VKIFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----VEDQATDRAHRIGQKNLVQVI 1047 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1048 KLVCKGTIEEKIIMLQEDKKELINNVMNS 1076 >gi|16800753|ref|NP_471021.1| hypothetical protein lin1685 [Listeria innocua Clip11262] gi|16414172|emb|CAC96916.1| lin1685 [Listeria innocua Clip11262] Length = 1072 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 77/210 (36%), Gaps = 25/210 (11%) Query: 3 QYHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + ++ DL+ N A + + Q+ + E + K+ Sbjct: 845 IYLAYLEKIQADLEESNGNASEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQ 901 Query: 59 LEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE 106 L I+ + N I++ F LA ++ + +NE Sbjct: 902 LFDTIQTARENGKRILIFSQFTGMLAIIRRKLEEDGQPLFYMDGKTPAKTRLDMVNAFNE 961 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ + + G GLNL G + ++ + LWW+ +E R + G KR V Sbjct: 962 GENDIFLISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQ 1015 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ +I + TI+E + + K + D L+ Sbjct: 1016 VFRMITKGTIEERIFDLQKKKQALVDELIQ 1045 >gi|213963570|ref|ZP_03391823.1| Non-specific serine/threonine protein kinase [Capnocytophaga sputigena Capno] gi|213953850|gb|EEB65179.1| Non-specific serine/threonine protein kinase [Capnocytophaga sputigena Capno] Length = 951 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 77/209 (36%), Gaps = 20/209 (9%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + + ++ L E I FN+ K Q++N V D E +++ + Sbjct: 734 QWYEREKSKVRNQLLEASEPISEFNALQMLTKLRQISNHPVLADAESTIPSGKYQEVISY 793 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNEGK 108 + A ++ F L + + T ++ N+ Sbjct: 794 METLHTAQH-KALIFSSFVKHLELFEAWCKTHKIKYSKLTGATATHERKSQVEAFQNQED 852 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + F + GLNL + ++ WW+ ER + R + G + V V Sbjct: 853 VSFFFISLKAGEVGLNLTK-ASYVLLLDPWWNP-----FSERQAIARAHRIGQENKVNVI 906 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++++I+E +++ K+ + + +++ Sbjct: 907 RFVSKDSIEEKIIKLQENKTELFENVIDE 935 >gi|325114415|emb|CBZ49972.1| hypothetical protein NCLIV_004490 [Neospora caninum Liverpool] Length = 1317 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 75/221 (33%), Gaps = 29/221 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYY--------DEEKHWKEVH 52 + Y + LQG + ++ + N + D + Sbjct: 638 QLYKDLLTKNVAALQGAEGAGRTQLLNLAMQLRKACNHPYLFEGYESENADPFGEHVIEN 697 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCT 100 K++ + ++ + ++ + L+ + Sbjct: 698 AGKLRFCDRLLRRLIQEHRRCLIFTQMTKMIDILEDYCRIRMFKYCRIDGNTSGDERDRQ 757 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N IP+ + G G+NL + ++ + W+ + ++ + R + Sbjct: 758 IEAFNAPGSDIPIFLLSTRAGGLGINL-ATADTVILYDSDWNPQ-----VDLQAMDRVHR 811 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K AV VY L+ ++TI++ +++R K + ++ + Sbjct: 812 IGQKSAVNVYRLVHEHTIEQKIIERAMLKLQLDTAIIQQGR 852 >gi|311740659|ref|ZP_07714486.1| SNF2 family superfamily II DNA/RNA helicase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304179|gb|EFQ80255.1| SNF2 family superfamily II DNA/RNA helicase [Corynebacterium pseudogenitalium ATCC 33035] Length = 1011 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 80/218 (36%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQGEN-IEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y ++ DLQ I + + Q+ N +Y + + K+ Sbjct: 780 LYKALVNQVKKDLQEATGINKRGLVLASLTRIKQICNHPAHYLGDNSPVTLKGKHRSGKV 839 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 K L I+++ + ++V + + L R G + +K +++ Sbjct: 840 KELMRIVDEATESGERLLVFTQYKAFGDILQPYLSDQLGREIPFLHGGVSKNKRDQMVED 899 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + E P + + G GLNL +I+V WW+ +E R + G + Sbjct: 900 FQSEDGPPAMILSLKAGGTGLNLTA-ASIVVHMDRWWNPA-----VENQATDRAFRIGQR 953 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V VY +I T++E + L K+ + ++ + Sbjct: 954 RNVQVYKMITAGTLEESIQDILDGKTQLAGAVVGEGEG 991 >gi|255324485|ref|ZP_05365602.1| DNA/RNA helicase, SNF2 family [Corynebacterium tuberculostearicum SK141] gi|255298391|gb|EET77691.1| DNA/RNA helicase, SNF2 family [Corynebacterium tuberculostearicum SK141] Length = 1011 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 80/218 (36%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQGEN-IEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y ++ DLQ I + + Q+ N +Y + + K+ Sbjct: 780 LYKALVNQVKKDLQEATGINKRGLVLASLTRIKQICNHPAHYLGDNSPVTLKGKHRSGKV 839 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 K L I+++ + ++V + + L R G + +K +++ Sbjct: 840 KELMRIVDEATESGERLLVFTQYKAFGDILQPYLSDQLGRDIPFLHGGVSKNKRDQMVED 899 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + E P + + G GLNL +I+V WW+ +E R + G + Sbjct: 900 FQSEDGPPAMILSLKAGGTGLNLTA-ASIVVHMDRWWNPA-----VENQATDRAFRIGQR 953 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V VY +I T++E + L K+ + ++ + Sbjct: 954 RNVQVYKMITAGTLEESIQDILDGKTQLAGAVVGEGEG 991 >gi|226360762|ref|YP_002778540.1| helicase [Rhodococcus opacus B4] gi|226239247|dbj|BAH49595.1| putative helicase [Rhodococcus opacus B4] Length = 1073 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 76/210 (36%), Gaps = 22/210 (10%) Query: 2 KQYH---KFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ L + F QL+ A D+ + +V K+ Sbjct: 854 KVYDTHLQRERQKILGLLADVDKNRFTILQSLTLLRQLSLDAGLVDD--EYHDVPSAKVD 911 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEG 107 AL + +V F L +++ + ++++ EG Sbjct: 912 ALLEQLADVVAGGHRALVFSQFTGFLGKVRDRLDDAGIAHAYLDGATRRRGDVLRDFKEG 971 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + WW+ E V R + G R V V Sbjct: 972 DAPVFLISLKAGGFGLNLTE-ADYCFILDPWWNPAT-----EAQAVDRAHRIGQTRNVMV 1025 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LIA++TI++ V+ KS + +++A Sbjct: 1026 YRLIAKDTIEDKVMALKAKKSALFSSVMDA 1055 >gi|319745629|gb|EFV97930.1| Snf2 family protein [Streptococcus agalactiae ATCC 13813] Length = 1032 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 73/205 (35%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 Q DL IE S + Q+ + + + + K+++L ++ Sbjct: 821 ESIQHSSDADLNRRKIE---ILSGITRLRQICDTPRLFMDY----DGESGKLESLRQLLT 873 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 874 QIKENGHRALIFSQFRGMLDIAEREMVAMGLTTYKITGSTPANERHEMTRAFNAGSKDAF 933 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + +V LWW+ ++R + G K V VY LI Sbjct: 934 LISLKAGGVGLNLT-GADTVVLIDLWWNPAVEM-----QAISRAHRLGQKENVEVYRLIT 987 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ TK + +L+ Sbjct: 988 RGTIEEKILEMQETKKHLVTTVLDG 1012 >gi|77411931|ref|ZP_00788262.1| Snf2 family protein [Streptococcus agalactiae CJB111] gi|77162028|gb|EAO73008.1| Snf2 family protein [Streptococcus agalactiae CJB111] Length = 1032 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 73/205 (35%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 Q DL IE S + Q+ + + + + K+++L ++ Sbjct: 821 ESIQHSSDADLNRRKIE---ILSGITRLRQICDTPRLFMDY----DGESGKLESLRQLLT 873 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 874 QIKENGHRALIFSQFRGMLDIAEREMVAMGLTTYKITGSTPANERHEMTRAFNAGSKDAF 933 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + +V LWW+ ++R + G K V VY LI Sbjct: 934 LISLKAGGVGLNLT-GADTVVLIDLWWNPAVEM-----QAISRAHRLGQKENVEVYRLIT 987 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ TK + +L+ Sbjct: 988 RGTIEEKILEMQETKKHLVTTVLDG 1012 >gi|296875956|ref|ZP_06900015.1| Snf2 family protein [Streptococcus parasanguinis ATCC 15912] gi|296433031|gb|EFH18819.1| Snf2 family protein [Streptococcus parasanguinis ATCC 15912] Length = 1032 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 78/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E N S ++ Q+ + + E+ + K+++L ++ Sbjct: 815 KQIQDRVRSSSEEELNRSKVEILSGLMRLRQICDTPALFMEDY---QGDSGKLESLRDLL 871 Query: 64 --EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPL 111 K +++ F L L++ Q +N G+ Sbjct: 872 GQIKDGDHRVLIFSQFRGMLDILEQEIDQLGMTSFKITGSTPAKDRQEMTNAFNAGERHA 931 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G ++ V VY +I Sbjct: 932 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEDQAIGRAHRMGQEQNVEVYRMI 985 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + Sbjct: 986 TRGTIEEKIQELQASKRHLVSTILDGTETR 1015 >gi|319949229|ref|ZP_08023314.1| SNF2-related protein [Dietzia cinnamea P4] gi|319437114|gb|EFV92149.1| SNF2-related protein [Dietzia cinnamea P4] Length = 818 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 73/212 (34%), Gaps = 22/212 (10%) Query: 2 KQYH-KFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + R+ L L + + +L A D V K Sbjct: 599 RIYERELARQRASLLALLDDFESNRISILAGLTVLRRLCLDASLVDP--DHLGVASAKTD 656 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEG 107 L + + +V F + L + + + E+ EG Sbjct: 657 ELIAALREVVAEGHRALVFSQFTTYLDTVVARLRDEGITVAHLDGSTTDRAGAVGEFTEG 716 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G + + WW+ E V R + G R V V Sbjct: 717 GAQVFCLSLKAGGVGLNL-VGADYVFLLDPWWNPAT-----EAQAVDRAHRIGQTRPVLV 770 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y ++A++TI+E V++ + K+ + +L++ + Sbjct: 771 YRMVARDTIEERVVELQQRKAELFASVLDSGE 802 >gi|22537758|ref|NP_688609.1| Snf2 family protein [Streptococcus agalactiae 2603V/R] gi|76787127|ref|YP_330236.1| Snf2 family protein [Streptococcus agalactiae A909] gi|76798459|ref|ZP_00780697.1| Snf2 family protein [Streptococcus agalactiae 18RS21] gi|77408487|ref|ZP_00785225.1| Snf2 family protein [Streptococcus agalactiae COH1] gi|22534649|gb|AAN00482.1|AE014265_11 Snf2 family protein [Streptococcus agalactiae 2603V/R] gi|76562184|gb|ABA44768.1| Snf2 family protein [Streptococcus agalactiae A909] gi|76586193|gb|EAO62713.1| Snf2 family protein [Streptococcus agalactiae 18RS21] gi|77172929|gb|EAO76060.1| Snf2 family protein [Streptococcus agalactiae COH1] Length = 1032 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 73/205 (35%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 Q DL IE S + Q+ + + + + K+++L ++ Sbjct: 821 ESIQHSSDADLNRRKIE---ILSGITRLRQICDTPRLFMDY----DGESGKLESLRQLLT 873 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 874 QIKENGHRALIFSQFRGMLDIAEREMVAMGLTTYKITGSTPANERHEMTRAFNAGSKDAF 933 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + +V LWW+ ++R + G K V VY LI Sbjct: 934 LISLKAGGVGLNLT-GADTVVLIDLWWNPAVEM-----QAISRAHRLGQKENVEVYRLIT 987 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ TK + +L+ Sbjct: 988 RGTIEEKILEMQETKKHLVTTVLDG 1012 >gi|323359978|ref|YP_004226374.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] gi|323276349|dbj|BAJ76494.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] Length = 983 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 73/212 (34%), Gaps = 22/212 (10%) Query: 3 QYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + ++++ L + + F LA D+ + K+ Sbjct: 764 VYDRVLQRERQKVLGLLDDLDRQRFIVFRSLTLLRMLALAPSLVDDRDAH--LGSAKLDV 821 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGK 108 L + + +V F S L + + + + + G+ Sbjct: 822 LLERLVEVTAEGHRALVFSQFTSFLDMAAERLDAAGLAYAHLDGSTARRGDVVAGFRAGE 881 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P+ + G GL L + + WW+ E + R + G ++VFVY Sbjct: 882 APVFLISLKAGGFGLTLTE-ADYVFVLDPWWNPAA-----EAQAIDRAHRIGQDKSVFVY 935 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LIA TI+E VL R K+ + D +++ + Sbjct: 936 RLIAAGTIEEKVLALQRRKAALFDAVIDDGEA 967 >gi|167032695|ref|YP_001667926.1| non-specific serine/threonine protein kinase [Pseudomonas putida GB-1] gi|166859183|gb|ABY97590.1| Non-specific serine/threonine protein kinase [Pseudomonas putida GB-1] Length = 1105 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 66/207 (31%), Gaps = 18/207 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE---EKHWKEVHDEKIKALEV 61 + R+ G +K Q+ + + + + Sbjct: 883 DQKVRDEIAR-NGAARSQIVILDALLKLRQVCCDLRLVKGVESKGNQADKGKLGALLEML 941 Query: 62 IIEKANAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + +++ F S L R + ++++ +G + Sbjct: 942 EELLSEGRRVLLFSQFTSMLALIEQELEKRKIRYSLLTGDTRDRRTPVRQFQQGDSEVFL 1001 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ F WW+ E R + G + VFV+ LI + Sbjct: 1002 ISLKAGGVGLNLTA-ADTVIHFDPWWNPAS-----ENQATDRAYRIGQDKPVFVFKLITR 1055 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKK 200 T++E + + K+ + LL+ + Sbjct: 1056 GTVEEKIQLLQQEKAALAASLLDGGQA 1082 >gi|169826616|ref|YP_001696774.1| ATP-dependent helicase [Lysinibacillus sphaericus C3-41] gi|168991104|gb|ACA38644.1| Hypothetical ATP-dependent helicase [Lysinibacillus sphaericus C3-41] Length = 923 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 69/214 (32%), Gaps = 25/214 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYY----DEEKHWKEVHDEKI 56 Y + E L+ + K QL N Y E+ K+ Sbjct: 695 LYEGYILETLDQLEELTGFQKKGRVLKMLSKLKQLCNHPALYLKEPFEDAQTMLARSAKL 754 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE 103 + + + + N ++ + LQ + + ++ Sbjct: 755 ERIVQMAAEIVDNGEQCLIFTQYIGMGQLLQHCLSELYNVDAPFLTGAMPKQQRDRLVEA 814 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G P+ + G GLNL N ++ WW+ +E R + G + Sbjct: 815 FQAGDFPIFILSLKAGGTGLNLTA-ANHVLHADRWWNPA-----VENQATDRAYRIGQTQ 868 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + TI+E + + L KS + + L+ + Sbjct: 869 FVQVHKFVTLGTIEEKIDKMLAQKSALSEELIQS 902 >gi|312868420|ref|ZP_07728620.1| SNF2 family N-terminal domain protein [Streptococcus parasanguinis F0405] gi|311096165|gb|EFQ54409.1| SNF2 family N-terminal domain protein [Streptococcus parasanguinis F0405] Length = 1032 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 78/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E N S ++ Q+ + + E+ + K+++L ++ Sbjct: 815 KQIQDRVRTSSEEELNRSKVEILSGLMRLRQICDTPALFMEDY---QGDSGKLESLRDLL 871 Query: 64 EKANA--APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPL 111 + +++ F L L+K Q +N G+ Sbjct: 872 GQIKDGEHRVLIFSQFRGMLDILEKEIDQLGMTSFKITGSTPAKDRQEMTNAFNAGERHA 931 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G ++ V VY +I Sbjct: 932 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEDQAIGRAHRMGQEQNVEVYRMI 985 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + Sbjct: 986 TRGTIEEKIQELQASKRHLVSTILDGTETR 1015 >gi|315041194|ref|XP_003169974.1| DNA repair and recombination protein RAD26 [Arthroderma gypseum CBS 118893] gi|311345936|gb|EFR05139.1| DNA repair and recombination protein RAD26 [Arthroderma gypseum CBS 118893] Length = 1226 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 71/224 (31%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGA--------VYYDEEKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 677 KVQRAAYEAFLASGEMSSILRGRREALYGIDMLRKICNHPDLTQHKILSQKTDYNYGSGA 736 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDK-DP 98 K++ ++ ++ K ++ L L+ G T K Sbjct: 737 KSGKMQVVKSLLELWKETGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKARQ 796 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N + + + G G+NL G + ++ + W+ R Sbjct: 797 SMVDEFNNDPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDM-----QARERAW 850 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 851 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 894 >gi|225682364|gb|EEH20648.1| DNA repair and recombination protein RAD26 [Paracoccidioides brasiliensis Pb03] Length = 1236 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 71/224 (31%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDE--------EKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 704 KIQRSAYQAFLGSNEMSSILRGRREALYGIDMLRKICNHPDLPEHKTLSTKPGYNYGSAA 763 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDK-DP 98 K++ ++ ++ K ++ L + G T K Sbjct: 764 KSGKMQVVKALLELWKETGHKSLLFAQHRIMLDILERFIKSMTGFKYQRMDGNTPIKLRQ 823 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N +I + G G+NL G + ++ + W+ + R Sbjct: 824 SLVDEFNNNPEIHIFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAW 877 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 878 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 921 >gi|77405797|ref|ZP_00782881.1| Snf2 family protein [Streptococcus agalactiae H36B] gi|77175584|gb|EAO78369.1| Snf2 family protein [Streptococcus agalactiae H36B] Length = 1032 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 73/205 (35%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 Q DL IE S + Q+ + + + + K+++L ++ Sbjct: 821 ESIQHSSDADLNRRKIE---ILSGITRLRQICDTPRLFMDY----DGESGKLESLRQLLT 873 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 874 QIKENGHRALIFSQFRGMLDIAEREMVAMGLTTYKITGSTPANERHEMTRAFNAGSKDAF 933 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + +V LWW+ ++R + G K V VY LI Sbjct: 934 LISLKAGGVGLNLT-GADTVVLIDLWWNPAVEM-----QAISRAHRLGQKENVEVYRLIT 987 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ TK + +L+ Sbjct: 988 RGTIEEKILEMQETKKHLVTTVLDG 1012 >gi|58697007|ref|ZP_00372482.1| helicase, SNF2 family [Wolbachia endosymbiont of Drosophila simulans] gi|58536740|gb|EAL60000.1| helicase, SNF2 family [Wolbachia endosymbiont of Drosophila simulans] Length = 773 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 72/213 (33%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K ++ Q+ N + ++K K++ LE Sbjct: 546 LYQKVVDTTMEKIEKSEGIERKGLIFKLINALKQICNHPSQFGKKKRASIEQSGKMQMLE 605 Query: 61 VIIEKANA--APIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNE- 106 I+ ++ + G + I ++ Sbjct: 606 EILISIGEVAEKSLIFTQYTEMGEIIARLLEERFESEVPFLHGGLSRKARDTMINDFQNL 665 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L + G GLNL N ++ + LWW+ +E R + G +R V Sbjct: 666 FQSNILIVSLKAGGTGLNLTA-ANHVIHYDLWWNPA-----VEAQATDRAYRIGQERNVM 719 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L++ T +E + + +++K + +L +++ + Sbjct: 720 VYRLLSTGTFEERIDEMIQSKKELANLTISSGE 752 >gi|323454552|gb|EGB10422.1| hypothetical protein AURANDRAFT_10276 [Aureococcus anophagefferens] Length = 505 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 73/213 (34%), Gaps = 26/213 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----HDEKIKALEVII 63 R+ G+ AF + + ++ N Y + K+ AL+ ++ Sbjct: 288 VRKALAGDGGQQATAFRAIAA---LRKICNHPDLYGGPPEGEPPGAASRSSKLAALDAVL 344 Query: 64 --EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG-KIP 110 KA ++V + L G T +N K Sbjct: 345 VRWKAQGHRVLVFSQTIAMLDVLEALVVARGWRYGRMDGGTAPAARQATADAFNASSKTF 404 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L+ + G GL+L G + +V + W+ + + R + G + V +Y L Sbjct: 405 LMLLTTRTGGVGLSL-VGADRVVLYDPDWNPQT-----DAQARERSWRLGQTKPVTIYRL 458 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + TI+E + R K + + +L+ K+ + Sbjct: 459 VCAGTIEEKIYHRQIFKQALTNKVLSDAKQRRL 491 >gi|306835829|ref|ZP_07468826.1| SNF2/RAD54 family protein [Corynebacterium accolens ATCC 49726] gi|304568303|gb|EFM43871.1| SNF2/RAD54 family protein [Corynebacterium accolens ATCC 49726] Length = 1009 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 76/218 (34%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y E+ L+ + + + Q+ N +Y + + K+ Sbjct: 778 LYKALVNEVKKSLEDATGISKRGIVLASLTRIKQICNHPAHYLGDDSPVVIKGKHRSGKV 837 Query: 57 KALEVIIE--KANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 K L I++ + +++ + + L G T +K +++ Sbjct: 838 KELMRIVDAATESGERLLIFTQYKAFGDILQPYLSGQLGHEIPFLHGGVTKNKRDQMVED 897 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + E + + G GLNL +I+V WW+ +E R + G + Sbjct: 898 FQSEDGPQAMILSLKAGGTGLNLTA-ASIVVHMDRWWNPA-----VENQATDRAFRIGQR 951 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V VY +I T++E + L K+ + ++ + Sbjct: 952 RNVQVYKMITAGTLEESIQDILDGKTQLAGAVVGEGEG 989 >gi|322805910|emb|CBZ03475.1| swf/SNF family helicase [Clostridium botulinum H04402 065] Length = 424 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 72/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + + + L+ + S + QL +E K++ Sbjct: 204 RIYKVYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK---GGSSKLRVAME 260 Query: 62 IIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN-EGK 108 ++++ I++ F S L + + E+N Sbjct: 261 LVQEGVDEGKKILLFSQFTSVLKNISKLLKKECIEYFYLDGSTNASERIKLVNEFNKNSH 320 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ +E R + G K V V Sbjct: 321 VKVFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----VEDQATDRAHRIGQKNLVQVI 374 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 375 KLVCKGTIEEKIIMLQEDKKELINNVMNS 403 >gi|296138942|ref|YP_003646185.1| SNF2-related protein [Tsukamurella paurometabola DSM 20162] gi|296027076|gb|ADG77846.1| SNF2-related protein [Tsukamurella paurometabola DSM 20162] Length = 958 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 67/214 (31%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWK----EVHDEKI 56 Y L +L+ + Q+ N Y ++ + K+ Sbjct: 724 LYQAVLNRLVEELRRSEGMPRRGLVLASLTRLKQVCNHPAQYLDDGSPLLRRGQHRSGKV 783 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQE 103 + L I+E + +V + LQ ++ Sbjct: 784 ELLADILETVAADGERALVFTQYAEFARMLQPWLSGLLGAEVPVLDGSVPRRDRDAMVER 843 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G P+L A S G GLNL N +V WW+ +E R + G Sbjct: 844 FQAGDGAPVLLATVKSGGTGLNLTA-ANHVVHVDRWWNPA-----VENQATDRAFRIGQT 897 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +AV V + T++E + + K + D+ + Sbjct: 898 KAVQVRKFVCAGTLEERIDGVIAAKRELSDMTVQ 931 >gi|218187342|gb|EEC69769.1| hypothetical protein OsI_00025 [Oryza sativa Indica Group] gi|222617568|gb|EEE53700.1| hypothetical protein OsJ_00022 [Oryza sativa Japonica Group] Length = 1355 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 67/215 (31%), Gaps = 30/215 (13%) Query: 11 LYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKAL 59 L +E NS ++ N + E + K+K + Sbjct: 827 YRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLLEREHAAQNPDYGNPERSGKMKVV 886 Query: 60 EVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP----------CTIQEWNE- 106 E ++ K +++ L ++ + I E+N Sbjct: 887 EQVLKVWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRRMDGLTPAKQRMALIDEFNNT 946 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +I + G G NL G N ++ + W+ R + G R V Sbjct: 947 DEIFIFILTTKVGGLGTNLT-GANRIIIYDPDWNPSTDM-----QARERAWRIGQTRDVT 1000 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY LI + TI+E V R K + + +L ++ Sbjct: 1001 VYRLITRGTIEEKVYHRQIYKHFLTNKVLKDPQQR 1035 >gi|119470636|ref|ZP_01613304.1| putative DNA helicase with SNF2 domain [Alteromonadales bacterium TW-7] gi|119446106|gb|EAW27384.1| putative DNA helicase with SNF2 domain [Alteromonadales bacterium TW-7] Length = 1048 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 70/203 (34%), Gaps = 21/203 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKA--LE 60 + +L + ++ A +K Q+ + + K++ Sbjct: 834 RALEEKLIDLFAEQGVQKSKLAFLEALLKLRQICCHPKLIEPDTQA---GSAKLEWLSTH 890 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNEGKIPLL 112 + + + +I+ F S L + K + I E+ GK + Sbjct: 891 LPLMLSLGRKVIIFSQFTSALDLIAKQLSELDINFSLLTGQTRHRDKVIDEFTSGKTSVF 950 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ F WW+ +E+ R + G VFVY LI Sbjct: 951 LISLKAGGTGLNLTQ-ADTVIHFDPWWNPA-----VEKQATDRAYRIGQTNPVFVYKLIM 1004 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 ++I++ V + K + D L Sbjct: 1005 SHSIEQKVFKMQEDKQALVDALF 1027 >gi|25011706|ref|NP_736101.1| Snf2 family protein [Streptococcus agalactiae NEM316] gi|77414227|ref|ZP_00790389.1| Snf2 family protein [Streptococcus agalactiae 515] gi|24413246|emb|CAD47325.1| Unknown [Streptococcus agalactiae NEM316] gi|77159716|gb|EAO70865.1| Snf2 family protein [Streptococcus agalactiae 515] Length = 1032 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 73/205 (35%), Gaps = 25/205 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 Q DL IE S + Q+ + + + + K+++L ++ Sbjct: 821 ESIQHSSDADLNRRKIE---ILSGITRLRQICDTPRLFMDY----DGESGKLESLHQLLT 873 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ F L ++ ++ + +N G Sbjct: 874 QIKENGHRALIFSQFRGMLDIAEREMVAMGLTTYKITGSTPANERHEMTRAFNAGSKDAF 933 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + +V LWW+ ++R + G K V VY LI Sbjct: 934 LISLKAGGVGLNLT-GADTVVLIDLWWNPAVEM-----QAISRAHRLGQKENVEVYRLIT 987 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +L+ TK + +L+ Sbjct: 988 RGTIEEKILEMQETKKHLVTTVLDG 1012 >gi|221488451|gb|EEE26665.1| chromatin remodelling complex protein SNF2L, putative [Toxoplasma gondii GT1] Length = 1556 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 74/220 (33%), Gaps = 28/220 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVHD 53 K Y + L + + ++ + N +D E Sbjct: 445 KLYADILSKNVEVLNAMSGSKTQMLNILMQLRKCCNHPYLFDGVEPGPPYVEGEHMVEAA 504 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K+ L+ ++ KA + +++ L + G + I Sbjct: 505 GKMALLDKLLPRLKAEGSRVLLFSQMTRLLDIVDDYCRWRGFDYCRIDGGTPGTERQERI 564 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 E+N L + G G+NL +I++ F ++ + ++ + R + Sbjct: 565 DEFNAEGSKKFLFLLSTRAGGLGINL-ATADIVILFDSDFNPQ-----MDLQAMDRAHRI 618 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V VY + +T++ +++R K + L++ + Sbjct: 619 GQKKRVVVYRFVTGDTVEAKIVERAAKKLKLDSLVIQKGR 658 >gi|313900256|ref|ZP_07833752.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] gi|312954965|gb|EFR36637.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] Length = 1117 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 74/212 (34%), Gaps = 21/212 (9%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +EL +L F ++ Q+ EE K+KA ++ Sbjct: 902 QVNKELQQELDLVKTNRFQVLGMLMRLRQICCDPRLVYEEVSQ---PSSKLKACMELVSS 958 Query: 66 --ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 N +++ +F S L ++ +Q++ + + + Sbjct: 959 LVENDKSVLLFSNFTSMLDLIQVELQHLHIPYFRMDGSTGKEERRELVQKFQDKEKKVFL 1018 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 S G G+NL ++ + WW++ E R + G V VY LI + Sbjct: 1019 ISLKSGGTGINLTA-AEAVIHYDPWWNVSA-----ENQASDRAYRIGQNSRVQVYKLIMR 1072 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 NT++E + + K + D+ + + + + Sbjct: 1073 NTVEERIQHLQQMKKELADIFVEENETNIMRM 1104 >gi|303315667|ref|XP_003067838.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240107514|gb|EER25693.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1213 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 70/224 (31%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K QR Y L + A + ++ N + + ++ Sbjct: 691 KLQRAAYEAFLSSNEMSAIMRGRRDVLFGVDILRKICNHPDLPEHKTLSQKANYNYGNSA 750 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKD 97 K++ ++ ++ + ++ L ++ + Sbjct: 751 KSGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRRMDGNTPIKVRQ 810 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + N+ I + G G+NL G + ++ + W+ + R Sbjct: 811 GMVDEFNNDPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DLQARERAW 864 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 865 RLGQKRDVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 908 >gi|322390087|ref|ZP_08063622.1| Snf2 family protein [Streptococcus parasanguinis ATCC 903] gi|321143214|gb|EFX38657.1| Snf2 family protein [Streptococcus parasanguinis ATCC 903] Length = 881 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 78/210 (37%), Gaps = 22/210 (10%) Query: 5 HKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q + + E N S ++ Q+ + + E+ + K+++L ++ Sbjct: 664 KQIQDRVRSSSEEELNRSKVEILSGLMRLRQICDTPALFMEDY---QGDSGKLESLRDLL 720 Query: 64 EKANA--APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPL 111 + +++ F L L++ Q +N G+ Sbjct: 721 GQIKDGEHRVLIFSQFRGMLDILEQEIDQLGMTSFKITGSTPAKDRQEMTNAFNAGERHA 780 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ LWW+ +E + R + G ++ V VY +I Sbjct: 781 FLISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEDQAIGRAHRMGQEQNVEVYRMI 834 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + +K + +L+ + Sbjct: 835 TRGTIEEKIQELQASKRHLVSTILDGTETR 864 >gi|221508955|gb|EEE34524.1| chromatin remodelling complex protein SNF2L, putative [Toxoplasma gondii VEG] Length = 1551 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 74/220 (33%), Gaps = 28/220 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVHD 53 K Y + L + + ++ + N +D E Sbjct: 445 KLYADILSKNVEVLNAMSGSKTQMLNILMQLRKCCNHPYLFDGVEPGPPYVEGEHMVEAA 504 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K+ L+ ++ KA + +++ L + G + I Sbjct: 505 GKMALLDKLLPRLKAEGSRVLLFSQMTRLLDIVDDYCRWRGFDYCRIDGGTPGTERQERI 564 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 E+N L + G G+NL +I++ F ++ + ++ + R + Sbjct: 565 DEFNAEGSKKFLFLLSTRAGGLGINL-ATADIVILFDSDFNPQ-----MDLQAMDRAHRI 618 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V VY + +T++ +++R K + L++ + Sbjct: 619 GQKKRVVVYRFVTGDTVEAKIVERAAKKLKLDSLVIQKGR 658 >gi|237833381|ref|XP_002365988.1| chromatin remodeling complex protein SNF2L, putative [Toxoplasma gondii ME49] gi|211963652|gb|EEA98847.1| chromatin remodeling complex protein SNF2L, putative [Toxoplasma gondii ME49] Length = 1556 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 74/220 (33%), Gaps = 28/220 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVHD 53 K Y + L + + ++ + N +D E Sbjct: 445 KLYADILSKNVEVLNAMSGSKTQMLNILMQLRKCCNHPYLFDGVEPGPPYVEGEHMVEAA 504 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K+ L+ ++ KA + +++ L + G + I Sbjct: 505 GKMALLDKLLPRLKAEGSRVLLFSQMTRLLDIVDDYCRWRGFDYCRIDGGTPGTERQERI 564 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 E+N L + G G+NL +I++ F ++ + ++ + R + Sbjct: 565 DEFNAEGSKKFLFLLSTRAGGLGINL-ATADIVILFDSDFNPQ-----MDLQAMDRAHRI 618 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V VY + +T++ +++R K + L++ + Sbjct: 619 GQKKRVVVYRFVTGDTVEAKIVERAAKKLKLDSLVIQKGR 658 >gi|302340105|ref|YP_003805311.1| SNF2-related protein [Spirochaeta smaragdinae DSM 11293] gi|301637290|gb|ADK82717.1| SNF2-related protein [Spirochaeta smaragdinae DSM 11293] Length = 1046 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 72/212 (33%), Gaps = 26/212 (12%) Query: 2 KQYHKFQRELYCDLQ-------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 + Y + + + +++ G A ++ Q A + DE+ D Sbjct: 825 RFYTRLKESMRAEVKSLIDAKPGSLKVANAILMALLRLRQAAISPILLDEKPETSSKLDV 884 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEW 104 I+ LE ++ + +++ F L I+ + Sbjct: 885 VIQLLETLLAE--GHKVLIFSQFVKVLSLLRARLEAKEMEYAYLDGSLGTRAREQAIRSF 942 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K + + G GLNL + + WW+ +E + R + G +R Sbjct: 943 KNAKG-IFLISLKAGGTGLNLTE-ADYVFILDPWWNPA-----VESQAIDRSHRIGQRRP 995 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V Y IA T++E +++ K I + LL+ Sbjct: 996 VIAYKFIATGTVEERIIELQEQKRRIANELLS 1027 >gi|226289757|gb|EEH45241.1| DNA repair and recombination protein RAD26 [Paracoccidioides brasiliensis Pb18] Length = 1236 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 71/224 (31%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDE--------EKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 704 KIQRSAYQAFLGSNEMSSILRGRREALYGIDMLRKICNHPDLPEHKTLSTKPGYNYGSAA 763 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDK-DP 98 K++ ++ ++ K ++ L + G T K Sbjct: 764 KSGKMQVVKALLELWKETGHKSLLFAQHRIMLDILERFIKSMTGFKYQRMDGNTPIKLRQ 823 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N +I + G G+NL G + ++ + W+ + R Sbjct: 824 SLVDEFNNNPEIHIFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAW 877 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 878 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 921 >gi|258517381|ref|YP_003193603.1| SNF2-related protein [Desulfotomaculum acetoxidans DSM 771] gi|257781086|gb|ACV64980.1| SNF2-related protein [Desulfotomaculum acetoxidans DSM 771] Length = 980 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 71/225 (31%), Gaps = 28/225 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKA 58 Y + ++ L+ A S +K QL + + +E K++ Sbjct: 744 LYENTLQNMFERLEEAAGMARRGVILSTLMKLKQLCDHPALFLKEEVPSNIRERSLKLER 803 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWN 105 L ++EK ++ F +Q G + I + Sbjct: 804 LLEMVEKLRQEGDSCLIFTQFVGMGQMIQRLLQKELKEEVYFLYGGTPRARREEMITGFQ 863 Query: 106 E-----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + G GLNL + + F WW+ +E R + G Sbjct: 864 NFDTTKNPSNIFVLSLKAGGLGLNLTA-ASHVFHFDRWWNPA-----VENQATDRSHRIG 917 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +R V V+ I T++E + + L K + + ++ + + Sbjct: 918 QQRHVQVHKFICLGTLEERIDEMLERKQGLNEQIVGGSEAWITEL 962 >gi|328543336|ref|YP_004303445.1| Helicase domain protein [Polymorphum gilvum SL003B-26A1] gi|326413081|gb|ADZ70144.1| Helicase domain protein [Polymorphum gilvum SL003B-26A1] Length = 481 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 78/208 (37%), Gaps = 18/208 (8%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y K + E+ C+++ + E A + +K + +QLA E E + Sbjct: 253 RLYDKMRDEMVCEIEAMSGEQYRAYASTALAKLTRLVQLACNPSLIFPEAEGTPAKFEAL 312 Query: 57 KALEVIIEKANAAPIIVAYHFNSDL-------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + I +I+ ++ + + T ++ + + Sbjct: 313 DGVIEDILSVPGRKVILWSNYIRTIETLLARIPGAVAIYGGTPTSERQEIAASFQQDPDV 372 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A+PA+ G G L + ++ SL W + + Q +R + G V Sbjct: 373 RVLIANPAAAGTGFTLTA-ASFTIYESLSWRYDHYAQSQDR-----NHRIGQTEPVTYLR 426 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIA +TI+E ++ L KS + LL Sbjct: 427 LIAADTIEEAIVVALERKSALARTLLGD 454 >gi|109088973|ref|XP_001107536.1| PREDICTED: DNA excision repair protein ERCC-6 [Macaca mulatta] Length = 1496 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 76/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 K Y F +E+Y L GE S + ++ N + +E Sbjct: 777 KVYQNFVDSKEVYRILNGE----MQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEE 832 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 833 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTT 892 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I +N + I + G G+NL G N +V + W+ + Sbjct: 893 TIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPST-----DTQ 946 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 947 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 996 >gi|50551421|ref|XP_503184.1| YALI0D23287p [Yarrowia lipolytica] gi|49649052|emb|CAG81384.1| YALI0D23287p [Yarrowia lipolytica] Length = 1660 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 79/227 (34%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVHD--- 53 K Y + + + A + ++ ++ ++ N ++E + + Sbjct: 943 KLYQQMIKHNVLFIGEGVQGATKTGLKGLNNQVMQLRKICNHPFVFEEVEDLVNPNRLTN 1002 Query: 54 -------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----------QGRTL 94 K + L+ I+ K I++ + + ++ G Sbjct: 1003 DNLWRTAGKFELLDRILPKFKAAGHRILMFFQMTQIMDIMEDFMRLKGWQYLRLDGGTKS 1062 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + ++N P + G GLNLQ + ++ + W+ + + Sbjct: 1063 EDRSGLLGKFNAPDSPYFAFLLSTRAGGLGLNLQT-ADTVIIYDTDWNPHQ-----DLQA 1116 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V + LI +++++E +L+R K I ++ A K Sbjct: 1117 QDRAHRIGQTKEVRILRLITEDSVEENILERAHKKLDIDGKVIQAGK 1163 >gi|119178020|ref|XP_001240720.1| hypothetical protein CIMG_07883 [Coccidioides immitis RS] Length = 1198 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 70/224 (31%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K QR Y L + A + ++ N + + ++ Sbjct: 676 KLQRAAYEAFLSSNEMSAIMRGRRDVLFGVDILRKICNHPDLPEHKTLSQKANYNYGNSA 735 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKD 97 K++ ++ ++ + ++ L ++ + Sbjct: 736 KSGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRRMDGNTPIKVRQ 795 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + N+ I + G G+NL G + ++ + W+ + R Sbjct: 796 GMVDEFNNDPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DLQARERAW 849 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 850 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 893 >gi|302308020|ref|NP_984796.2| AEL065Cp [Ashbya gossypii ATCC 10895] gi|299789257|gb|AAS52620.2| AEL065Cp [Ashbya gossypii ATCC 10895] Length = 1025 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 68/225 (30%), Gaps = 35/225 (15%) Query: 6 KFQRELYCDLQGEN--IEAFN----SASKTVKCLQLANGA------VYYDEEKHWKEVHD 53 +FQ+E Y I+ N ++ N E Sbjct: 555 QFQKEKYLQFLNSEDMIKIKNGRRQVLYGIDILRKICNHPDLLERDFRKHEPSFGDPRRS 614 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTL---------------DK 96 K+ ++ ++ K ++ L L+ Sbjct: 615 GKMTVIKQLLLTWKKQGHKALLFTQSRQMLDILEAYISHKDPELAGLQYLRMDGTTNIAH 674 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N G L G G+NL G N ++ F W+ + R Sbjct: 675 RQALVDRFNNGPYHLFLLTTRVGGLGVNLT-GANRIIIFDPDWNPST-----DLQARERA 728 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ +I+E + R K + + +L+ K++ Sbjct: 729 WRIGQKRDVTIYLLMVAGSIEEKIYHRQIFKQFLTNKVLSDPKQK 773 >gi|297491621|ref|XP_002698997.1| PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 6-like [Bos taurus] gi|296472015|gb|DAA14130.1| excision repair cross-complementing rodent repair deficiency, complementation group 6-like [Bos taurus] Length = 1006 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 74/230 (32%), Gaps = 40/230 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD---------------E 44 K Y F +E+Y L GE S V ++ N + E Sbjct: 242 KVYQNFIDSKEVYRILNGE----MQIFSGLVALRKICNHPDLFSGGPKNLKGIPDEELGE 297 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 298 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTT 357 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I +N + I + G G+NL G N ++ + W+ + Sbjct: 358 AIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPST-----DTQ 411 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 412 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 461 >gi|190570762|ref|YP_001975120.1| helicase, SNF2 family [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357034|emb|CAQ54427.1| helicase, SNF2 family [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 1178 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 74/213 (34%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + ++ Q+ N ++ ++K K++ LE Sbjct: 951 LYQEVVNTTMKKIERSEGIERKGLILKLINALKQVCNHPSHFGKKKRASIEQSGKMQMLE 1010 Query: 61 VIIEKANA--APIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEW-NE 106 I+ + ++ + + + ++ N Sbjct: 1011 EILIGISELAEKSLIFTQYTEMGEIIARLLEEKFESKVPFLHGSLSRKARDKMVNDFENS 1070 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L + G GLNL N ++ + LWW+ +E R + G +R V Sbjct: 1071 FRSNILIVSLKAGGTGLNLTA-ANHVIHYDLWWNPA-----VEAQATDRAYRIGQERNVM 1124 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L++ T +E + + +++K + +L +++ + Sbjct: 1125 VYRLLSTGTFEERIDEMIQSKKELANLTISSGE 1157 >gi|149196419|ref|ZP_01873474.1| hypothetical protein LNTAR_14717 [Lentisphaera araneosa HTCC2155] gi|149140680|gb|EDM29078.1| hypothetical protein LNTAR_14717 [Lentisphaera araneosa HTCC2155] Length = 1035 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 62/218 (28%), Gaps = 31/218 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG----------AVYYDEEKHWKEVH 52 Y + R+ L+ A N + + QL+ Sbjct: 811 LYQREMRQARQSLKAG--NAMNVLASLTRLRQLSCHSAFGCPEEYRPDPDLPLAQRSPKA 868 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQ 102 I+ + ++ + + F + K + Sbjct: 869 AAFIEKAKDLMAE--GHSCLFFSQFTGILKEIEKELHNEHIKTHMITGETPSQKRSKIVD 926 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+ + + G GLNL + + F WW+ E + R + G Sbjct: 927 EFSESPDASVFLLSLKAAGTGLNLTR-ASYVFIFDPWWNPAA-----ENQAIDRSHRIGQ 980 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V +Y +I+ ++++E V K + D ++ + Sbjct: 981 DNPVIIYRMISADSVEEKVAALQAEKQKLFDEIIEQDE 1018 >gi|227529368|ref|ZP_03959417.1| SNF2 helicase associated domain protein [Lactobacillus vaginalis ATCC 49540] gi|227350725|gb|EEJ41016.1| SNF2 helicase associated domain protein [Lactobacillus vaginalis ATCC 49540] Length = 1173 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 79/216 (36%), Gaps = 27/216 (12%) Query: 2 KQYHK----FQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + L E F ++ + QL + K+ Sbjct: 951 KLYQARATRLVKRLQSQDDEEFKNNRFEMLAEITRLRQLCCSPKLLN---ADYRGRSGKV 1007 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEW 104 +I I++ F S LA L++ + + D ++E+ Sbjct: 1008 DQTMELIRDEIAAGHKILLFSQFTSALAILRQRIEKEQISDFVIEGKTKKSDRQAFVKEF 1067 Query: 105 NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N P + + G GLNL ++++ F WW++ E R + G + Sbjct: 1068 NTYNGPAIFLISLKAGGTGLNLTS-ADVVIHFDPWWNVAA-----ENQATDRAHRIGQQH 1121 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V +Y +IA++TI+E ++ + KS + + +L+ + Sbjct: 1122 NVSIYKMIAKDTIEERIIAMQKQKSELANAILSGDE 1157 >gi|320034068|gb|EFW16014.1| DNA repair and recombination protein RAD26 [Coccidioides posadasii str. Silveira] Length = 1198 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 70/224 (31%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K QR Y L + A + ++ N + + ++ Sbjct: 676 KLQRAAYEAFLSSNEMSAIMRGRRDVLFGVDILRKICNHPDLPEHKTLSQKANYNYGNSA 735 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKD 97 K++ ++ ++ + ++ L ++ + Sbjct: 736 KSGKMQVVKALLELWRDTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRRMDGNTPIKVRQ 795 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + N+ I + G G+NL G + ++ + W+ + R Sbjct: 796 GMVDEFNNDPDIHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DLQARERAW 849 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 850 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 893 >gi|194335233|ref|YP_002017027.1| Non-specific serine/threonine protein kinase [Pelodictyon phaeoclathratiforme BU-1] gi|194307710|gb|ACF42410.1| Non-specific serine/threonine protein kinase [Pelodictyon phaeoclathratiforme BU-1] Length = 1007 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 78/229 (34%), Gaps = 35/229 (15%) Query: 1 MKQYHKFQRE-------LYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKH 47 MK+Y +E + +LQ + A + VK Q+ N + + Sbjct: 762 MKEYCSLTKEQASLYKAVVDELQEKIESAEGIDRRGLVLALLVKLKQVCNHPAHLLGDNS 821 Query: 48 WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAF-----------PQGRTL 94 KIK L ++ + ++ F LQ G T Sbjct: 822 AIAHRSGKIKRLTELLGDIREAGEKTLLFTQFTMMGTMLQHYLQELYGEEVLFLHGGVTK 881 Query: 95 DKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ + + + + G GLNL N +V F WW+ +E Sbjct: 882 KRRDEMVESFQKEEGSSPSIFILSLKAGGTGLNLTT-ANHVVHFDRWWNPA-----VENQ 935 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G + V V+ I T++E + + + K+T+ +L ++ Sbjct: 936 ATDRAFRIGQHKNVEVHKFITTGTLEERIDEMIEKKTTVAGQVLGTGEQ 984 >gi|307317157|ref|ZP_07596598.1| DEAD-like helicase [Sinorhizobium meliloti AK83] gi|306897245|gb|EFN27990.1| DEAD-like helicase [Sinorhizobium meliloti AK83] Length = 522 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 78/205 (38%), Positives = 122/205 (59%), Gaps = 12/205 (5%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY------YDEEKHWKEVHDE 54 MK+Y +F++ L ++EA + T K LQ ANG +Y ++ ++ +HD Sbjct: 319 MKEYREFEKTLVAQ--NYDVEAVSRGVLTGKLLQFANGGLYRLDEDVFNAKRETIAIHDY 376 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 K+KALE I+E+A ++VAY F D R++K FP+ D++P +++WN GKI + A Sbjct: 377 KLKALESIVEEAAGQNVLVAYSFQFDKDRIRKKFPKAVFFDEEPNFVKKWNAGKIQMGVA 436 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 HPAS GHGLNLQ+GG+I V+F L W LE Q R+ Q+ +VF++ +IA+ Sbjct: 437 HPASIGHGLNLQHGGHIQVWFGLTWSLELWDQFNRRLARPGQK----NHSVFIHVIIAKG 492 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 T+DE + L+ K QD ++NA++ Sbjct: 493 TMDEAQYETLQIKGVTQDQIMNAVR 517 >gi|85109522|ref|XP_962958.1| hypothetical protein NCU07837 [Neurospora crassa OR74A] gi|28924603|gb|EAA33722.1| hypothetical protein NCU07837 [Neurospora crassa OR74A] Length = 1150 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 72/222 (32%), Gaps = 33/222 (14%) Query: 8 QRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEV-------HDE 54 QRE Y L+ +++ A S ++ N D Sbjct: 649 QREAYELFLKSDDMTAILNRTRQSLYGIDILRKICNHPDLLDPRLKDDPSYKWGSTSKSG 708 Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTI 101 K+ ++ ++ K ++ L ++ + + Sbjct: 709 KMAVVKSLLPMWKRLGHKTLLFCQGTQMLDIIEAFVRRQDGINYLRMDGKTPVKDRQTLV 768 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N + + L G G NL G N ++ F W+ + R + G Sbjct: 769 DQFNNDPDLHLFLLTTKVGGLGTNLT-GANRVIIFDPDWNPST-----DVQARERAWRLG 822 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 K+ V +Y L+ TI+E + R K + + +L K++T Sbjct: 823 QKKEVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQT 864 >gi|126654102|ref|ZP_01725924.1| helicase, putative [Bacillus sp. B14905] gi|126589410|gb|EAZ83559.1| helicase, putative [Bacillus sp. B14905] Length = 924 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 69/214 (32%), Gaps = 25/214 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYY----DEEKHWKEVHDEKI 56 Y + E L+ + K QL N Y E+ K+ Sbjct: 696 LYEGYILETLDQLEELTGFQKKGRVLKMLSKLKQLCNHPALYLKEPFEDAETMLARSAKL 755 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE 103 + + + + N ++ + LQ + + ++ Sbjct: 756 ERIVQMAAEIVDNGEQCLIFTQYIGMGQLLQHCLSELYNVDAPFLTGAMPKQQRDRLVEA 815 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G P+ + G GLNL N ++ WW+ +E R + G + Sbjct: 816 FQAGDFPIFILSLKAGGTGLNLTA-ANHVLHADRWWNPA-----VENQATDRAYRIGQTQ 869 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + TI+E + + L KS + + L+ + Sbjct: 870 FVQVHKFVTLGTIEEKIDKMLAQKSALSEELIQS 903 >gi|302411025|ref|XP_003003346.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum VaMs.102] gi|261358370|gb|EEY20798.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum VaMs.102] Length = 1117 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 70/223 (31%), Gaps = 31/223 (13%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK-------EVH 52 ++ Y +F + + S ++ N D K Sbjct: 624 LEAYKQFLNSDAVNQILSA---RRKSLYGIDILRKICNHPDLIDPHLQNKAGYDWGDPEK 680 Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPC 99 K+ + ++ K ++ L +++K Sbjct: 681 SGKMLVVRNLLQIWKKLGHKTLLFSQSKMMLNVIEKFLGGLETVKYVRMDGETSIEKRQS 740 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++N + +I + + G G+NL G N ++ F W+ R + Sbjct: 741 LIDQFNTDPEIDIFLLTTRTGGLGVNLT-GANRIIIFDPDWNPSTDM-----QARERAWR 794 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R+V +Y L+ TI+E + R K + + +L K+ Sbjct: 795 LGQTRSVEIYRLMTAGTIEEKIYHRQIFKQFMTNKVLKDPKQR 837 >gi|327302918|ref|XP_003236151.1| DNA repair protein Rhp26/Rad26 [Trichophyton rubrum CBS 118892] gi|326461493|gb|EGD86946.1| DNA repair protein Rhp26/Rad26 [Trichophyton rubrum CBS 118892] Length = 1225 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYD--------EEKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 675 KVQRAAYEAFLASGEMSSILRGRREALYGIDMLRKICNHPDLTQHKILSTKTDYNYGSGA 734 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDK-DP 98 K++ ++ ++ K ++ L L+ G T K Sbjct: 735 KSGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIGGFNGFNYRRMDGNTPIKVRQ 794 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N + + + G G+NL G + ++ + W+ + R Sbjct: 795 SMVDEFNNDPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAW 848 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 849 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 892 >gi|327439414|dbj|BAK15779.1| superfamily II DNA/RNA helicase, SNF2 family [Solibacillus silvestris StLB046] Length = 1061 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 72/208 (34%), Gaps = 23/208 (11%) Query: 6 KFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K + + L E + + Q+ + E K + L ++ Sbjct: 846 KLRVDTMKHLDKETFHKNRIRILAGITRLRQICCHPALFVEGYK---GSSAKFEQLFRLL 902 Query: 64 EKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 E++ + +++ F L ++ +N+G+ + Sbjct: 903 EQSKVSGRRVLIFSQFTQMLKMIATELSKRGEQYFYLDGQTPSEERIALCNSFNDGERDM 962 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL G + ++ + LWW+ +E R + G K V V LI Sbjct: 963 FLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAADRAHRMGQKEVVQVIKLI 1016 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALK 199 A TI+E + + + K + +L+ + Sbjct: 1017 ANGTIEEKMSELQQKKKMLISDILDGDE 1044 >gi|255720394|ref|XP_002556477.1| KLTH0H14300p [Lachancea thermotolerans] gi|238942443|emb|CAR30615.1| KLTH0H14300p [Lachancea thermotolerans] Length = 1037 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 71/227 (31%), Gaps = 36/227 (15%) Query: 3 QYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYY------DEEKHWKEV 51 QY + + L E++ ++ N +E+ + Sbjct: 561 QYQ--RNKYLQFLNSEDLVKIKNGKRQVLFGIDILRKICNHPDLLEREQRQNEDSYGDPK 618 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK------------- 96 K++ ++ ++ + ++ L L++ + Sbjct: 619 RSGKMQVVKQLLKLWHSQGHKTLLFTQSRQMLDILERFISYKDPELEELTYLRMDGTTSI 678 Query: 97 --DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N G + G G+NL G N ++ F W+ Sbjct: 679 GARQALVDSFNNGSYDVFLLTTRVGGLGVNLT-GANRIIIFDPDWNPSTDM-----QARE 732 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G +R V +Y L+ +I+E + R K + + +L K++ Sbjct: 733 RAWRIGQRREVTIYRLMIAGSIEEKIYHRQIFKQFLTNKILTDPKQK 779 >gi|283796858|ref|ZP_06346011.1| protein, SNF2 family [Clostridium sp. M62/1] gi|291075264|gb|EFE12628.1| protein, SNF2 family [Clostridium sp. M62/1] Length = 449 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 89/209 (42%), Gaps = 21/209 (10%) Query: 3 QYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + +RE + +L+ G I A +K ++ Q G + D E+ + V K+ ALE Sbjct: 241 IYDRIKRESFAELESGGQISATTVLTKLLRLQQFTGGFLVADGEEKPELVSKGKLNALEE 300 Query: 62 IIEKA---NAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWN-EG 107 I++ +++ F ++ + + L+ ++++ Sbjct: 301 IVDDYVVDAGKKLVIFARFRPEIDIIGQMLKKKKLRYGEIYGDVKLEDRGDIVKDFQTNP 360 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + A + G G+ L + V++S+ ++ + Q + RI + G K A Sbjct: 361 ETMVFLAQIDTAGLGITLTA-ADTCVYYSVNFNYAAYSQSLARI-----HRIGQKNACTY 414 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +LI + TIDE+VL+ L K + +++ Sbjct: 415 IHLITEGTIDEVVLKALAKKEDLAKTVVD 443 >gi|26554357|ref|NP_758291.1| helicase/SNF2 domain-containing protein [Mycoplasma penetrans HF-2] gi|26454367|dbj|BAC44695.1| helicase with SNF2 domain [Mycoplasma penetrans HF-2] Length = 1041 Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 27/212 (12%) Query: 4 YHKFQRELYCD---LQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + ++ + I + S K Q+ E ++ K Sbjct: 819 YAELSKSQIAIRKGIEDKTINKQGAFIFSVLTKLRQICCSPKLSYENSD---INGSKFNL 875 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 +I+ N I++ F S + + + + + + E+N Sbjct: 876 CIDLIKDLIKNNDKILLFSQFTSMIDLIAQELKKLKINFLVLTGETNKKERMELVNEFNN 935 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 I + + G GL L N ++ + WW+L E R + G ++ V Sbjct: 936 KNNIKIFLISLKAGGTGLTLTS-ANAVIHYDPWWNLSL-----ENQATDRAHRIGQEKNV 989 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y LI +++I+E +L +K I + + + Sbjct: 990 FIYKLIVKDSIEEKILSLQESKREIINQIFDE 1021 >gi|299538009|ref|ZP_07051295.1| ATP-dependent helicase [Lysinibacillus fusiformis ZC1] gi|298726591|gb|EFI67180.1| ATP-dependent helicase [Lysinibacillus fusiformis ZC1] Length = 921 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 67/214 (31%), Gaps = 25/214 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYY----DEEKHWKEVHDEKI 56 Y + E L+ + K QL N Y E+ K+ Sbjct: 694 LYEGYILETLDQLEQLTGFQKKGRVLKMLSKLKQLCNHPALYLKEPFEDAETMLARSTKL 753 Query: 57 KALEV-------------IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE 103 + + I + ++ + F+ + ++ Sbjct: 754 ERIVQMAAEIVDNGEQCLIFTQYIGMGQLLQHCFSEIYNVDAPFLTGAMPKQQRDRLVEA 813 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G P+ + G GLNL N ++ WW+ +E R + G + Sbjct: 814 FQAGDFPIFILSLKAGGTGLNLTA-ANHVLHADRWWNPA-----VENQATDRAYRIGQTQ 867 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + TI+E + + L KS + + L+ + Sbjct: 868 FVQVHKFVTIGTIEEKIDKMLVQKSALSEELIQS 901 >gi|111018652|ref|YP_701624.1| helicase [Rhodococcus jostii RHA1] gi|110818182|gb|ABG93466.1| probable helicase [Rhodococcus jostii RHA1] Length = 1070 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 76/210 (36%), Gaps = 22/210 (10%) Query: 2 KQYH---KFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ L + F QL+ A D + +V K+ Sbjct: 851 KVYDTHLQRERQKILGLLADVDKNRFTILQSLTLLRQLSLDAGLVD--AEYHDVPSAKVD 908 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEG 107 AL + +V F L +++ + + ++E+ EG Sbjct: 909 ALLEQLADVVAGGHRALVFSQFTGFLGKIRDRLADAGIAHSYLDGSTRRRGDVLREFKEG 968 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + WW+ E V R + G R V V Sbjct: 969 AAPVFLISLKAGGFGLNLTE-ADYCFILDPWWNPAT-----EAQAVDRAHRIGQTRNVMV 1022 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LIA++TI++ V+ KS + +++A Sbjct: 1023 YRLIAKDTIEDKVMALKAKKSALFASVMDA 1052 >gi|168182529|ref|ZP_02617193.1| helicase, Snf2 family [Clostridium botulinum Bf] gi|182674407|gb|EDT86368.1| helicase, Snf2 family [Clostridium botulinum Bf] Length = 1097 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 76/216 (35%), Gaps = 23/216 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + + + L+ + S + QL +E K++ Sbjct: 877 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK---GGSSKLRIAME 933 Query: 62 IIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGK 108 ++E+ I++ F S L + + E+N Sbjct: 934 LVEEGVDEGKKILLFSQFISVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNSH 993 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ IE R + G K V V Sbjct: 994 VKVFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----IEDQATDRAHRIGQKNLVQVI 1047 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETI 203 L+ + TI+E ++ K + + ++N+ LK E + Sbjct: 1048 KLVCKGTIEEKIIMLQEDKKELINNVMNSDLKNEHL 1083 >gi|227540131|ref|ZP_03970180.1| SNF2 family superfamily II DNA/RNA helicase [Sphingobacterium spiritivorum ATCC 33300] gi|227239992|gb|EEI90007.1| SNF2 family superfamily II DNA/RNA helicase [Sphingobacterium spiritivorum ATCC 33300] Length = 1119 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 76/206 (36%), Gaps = 18/206 (8%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K RE +G+ I K Q+ N E E + KI+ L Sbjct: 900 LYEKEFREFISATEGDEIRKSPMYVLKGLTKLRQICNSTKLLKTEDLSTEDNSAKIETLI 959 Query: 61 V-IIEKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKIP 110 I + IIV F S L +QK G+T +++ + Sbjct: 960 EQIEDNIAYHKIIVFSQFVSMLYLIQKALSAKGINAYMLTGKTKNREQVVHNFQQQEDNR 1019 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL +++ WW+ +E + R + G ++ V L Sbjct: 1020 VFLISLKAGGTGLNLTA-ASLVYLVDPWWNPA-----VENQAIDRAYRIGQQQTVTAVRL 1073 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 I +T++E +++ ++K+ + L+ Sbjct: 1074 ITPDTVEEKMIKMQQSKNELASALIG 1099 >gi|167756157|ref|ZP_02428284.1| hypothetical protein CLORAM_01680 [Clostridium ramosum DSM 1402] gi|167704149|gb|EDS18728.1| hypothetical protein CLORAM_01680 [Clostridium ramosum DSM 1402] Length = 1068 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 68/203 (33%), Gaps = 21/203 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + EL L E I+ + + Q+ A + K+KA II+K Sbjct: 851 QINSELKTALDVERIDKIQILAMMTRLRQICCDARILY---NEIIGPSSKMKACLDIIKK 907 Query: 66 --ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 N +++ F S L K + + + Sbjct: 908 AKENNQKVLLFSSFTSSLDLLEKELRKEDISYYVLTGATNKIKRHQLVNAFQNDNTDVFL 967 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL +I++ F WW++ R + G V VY LI + Sbjct: 968 ISLKAGGTGLNLTA-ASIVIHFDPWWNMSAQ-----NQATDRAYRIGQTNNVQVYKLIMK 1021 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 N+I+E + + K + ++ + Sbjct: 1022 NSIEEKIQELQAQKQDLSNIFIE 1044 >gi|25027819|ref|NP_737873.1| chromodomain-containing helicase [Corynebacterium efficiens YS-314] gi|259506209|ref|ZP_05749111.1| DNA/RNA helicase [Corynebacterium efficiens YS-314] gi|23493102|dbj|BAC18073.1| putative chromodomain helicase [Corynebacterium efficiens YS-314] gi|259166186|gb|EEW50740.1| DNA/RNA helicase [Corynebacterium efficiens YS-314] Length = 1034 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 71/223 (31%), Gaps = 26/223 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y ++ L + + Q+ N ++ + + K+ Sbjct: 799 LYKALVDDVQQQLSQRQGMSRKGLVLATITRIKQICNHPAHFLNDGSPLTLRGRHRSGKV 858 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQE 103 +AL +++ A +++ + + L G + + Sbjct: 859 EALMDLLDDAVAQERRMLIFTQYTAFGQLLAPYLSDRLGVDIPFLHGGVSKLGRDRMVAR 918 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G P + + G GLNL +I+V WW+ +E R + G K Sbjct: 919 FQAGDGPPAMILSLKAGGTGLNLTA-ASIVVHMDRWWNPA-----VENQATDRAFRIGQK 972 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V VY +I T++E + L K + ++ + + Sbjct: 973 NNVDVYKMITAGTMEESIQDILDGKMHLASAIVGEGEGWITEL 1015 >gi|117558161|gb|AAI27105.1| Excision repair cross-complementing rodent repair deficiency, complementation group 6 [Homo sapiens] Length = 1493 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 76/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 K Y F +E+Y L GE S + ++ N + +E Sbjct: 774 KVYQNFVDSKEVYRILNGE----MQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEE 829 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 830 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTT 889 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I +N + I + G G+NL G N +V + W+ + Sbjct: 890 TIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPST-----DTQ 943 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 944 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 993 >gi|237794935|ref|YP_002862487.1| helicase, Snf2 family [Clostridium botulinum Ba4 str. 657] gi|229261620|gb|ACQ52653.1| helicase, Snf2 family [Clostridium botulinum Ba4 str. 657] Length = 1097 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 76/216 (35%), Gaps = 23/216 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + + + L+ + S + QL +E K++ Sbjct: 877 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK---GGSSKLRIAME 933 Query: 62 IIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGK 108 ++E+ I++ F S L + + E+N Sbjct: 934 LVEEGVDEGKKILLFSQFISVLKNISKLLEKEGIEYFYLDGSTNASERIKLVNEFNKNSH 993 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ IE R + G K V V Sbjct: 994 VKVFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----IEDQATDRAHRIGQKNLVQVI 1047 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETI 203 L+ + TI+E ++ K + + ++N+ LK E + Sbjct: 1048 KLVCKGTIEEKIIMLQEDKKELINNVMNSDLKNEHL 1083 >gi|270157430|ref|ZP_06186087.1| SNF2/RAD54 family DNA helicase [Legionella longbeachae D-4968] gi|289164177|ref|YP_003454315.1| DNA/RNA helicases, superfamily II, SNF2 family [Legionella longbeachae NSW150] gi|269989455|gb|EEZ95709.1| SNF2/RAD54 family DNA helicase [Legionella longbeachae D-4968] gi|288857350|emb|CBJ11178.1| putative DNA/RNA helicases, superfamily II, SNF2 family [Legionella longbeachae NSW150] Length = 1091 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 73/220 (33%), Gaps = 25/220 (11%) Query: 3 QYHK----FQRELYCDLQGENIEAFNSASKTVKC--LQLANGAVYYD-EEKHWKEVHDEK 55 Y ++++ + + + + Q+ E K Sbjct: 865 LYEAIRMSMEKKVRDAIAKQGLGKSHILLLDALLKLRQVCCDPRLLSLPEAAIAHGTSAK 924 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLA--------RLQKAFPQGRTLDKDPCTIQEWN 105 ++AL ++ ++V F S L R + ++ Sbjct: 925 LEALMDLLNNLIGEGRRVLVFSQFTSMLQLIEEELRARHYDYLKLTGQTQHRQAMVDKFQ 984 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 EG P+ + G GLNL + ++ + WW+ +E R + G + V Sbjct: 985 EGNTPVFLISLKAGGTGLNLTR-ADTVIQYDPWWNPA-----VEAQATDRAHRIGQENPV 1038 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL--NALKKETI 203 FVY LI T++E +L K + + +L ++ K + Sbjct: 1039 FVYKLITAGTVEEAILTMQEKKRLLGESVLSPDSTKATAL 1078 >gi|237733335|ref|ZP_04563816.1| SWF/SNF family helicase [Mollicutes bacterium D7] gi|229383547|gb|EEO33638.1| SWF/SNF family helicase [Coprobacillus sp. D7] Length = 1068 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 69/203 (33%), Gaps = 21/203 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + EL L E I+ + + Q+ A + K+KA II+K Sbjct: 851 QINSELKTALDVERIDKIQILAMMTRLRQICCDARILY---NEIIGPSSKMKACLDIIKK 907 Query: 66 --ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 N +++ F S L L K + + + Sbjct: 908 AKENNQKVLLFSSFTSSLDLLEKELRKEDILYYVLTGATNKIKRHQLVNAFQNDNTDVFL 967 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL +I++ F WW++ R + G V VY LI + Sbjct: 968 ISLKAGGTGLNLTA-ASIVIHFDPWWNMSAQ-----NQATDRAYRIGQTNNVQVYKLIMK 1021 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 N+I+E + + K + ++ + Sbjct: 1022 NSIEEKIQELQAQKQDLSNIFIE 1044 >gi|218282742|ref|ZP_03488939.1| hypothetical protein EUBIFOR_01525 [Eubacterium biforme DSM 3989] gi|218216387|gb|EEC89925.1| hypothetical protein EUBIFOR_01525 [Eubacterium biforme DSM 3989] Length = 1054 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 21/190 (11%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYH 76 +++ + + Q+ E + K +IE K N +++ Sbjct: 853 KVDSILILAMMTRLRQICCEPRMLYENYKGE---STKFSMCLDLIETLKENGKKVLLFSS 909 Query: 77 FNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 F S K + + + + G GLNL Sbjct: 910 FTSIFDDFIEEFDRRGIKYHMITGAVDKKKRKEEVDAFQNDDSNVFLISLKAGGTGLNLT 969 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++ F WW++ R + G + V VY L+ +NTI+E + + + Sbjct: 970 K-AQAVIHFDPWWNVSAQ-----NQATDRAYRIGQTKNVLVYQLLMKNTIEEKIYEMQKR 1023 Query: 187 KSTIQDLLLN 196 K + DL + Sbjct: 1024 KKEMSDLFVE 1033 >gi|326445042|ref|ZP_08219776.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 1242 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 69/225 (30%), Gaps = 28/225 (12%) Query: 3 QYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DE 54 Y R+ ++ Q+ N Y +E Sbjct: 1010 LYEANVRDTLREITASSGIERRGLVLKLLQALRQICNTPTLYLKEPLEDAEPATLARRSG 1069 Query: 55 KIKALEVIIEKANAAPI--IVAYHFNSD----------LARLQKAFPQGRTLDKDPCTIQ 102 K+ AL+ ++ A +V + R + G + + Sbjct: 1070 KLAALDDLMSTLAARSEAALVFTGYVQMGRILEHHLRARGRSVRFLHGGTPPARRQELVD 1129 Query: 103 EWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + P+L + G GL L ++ + W+ +E R + G Sbjct: 1130 IFQHDPDPAPVLILSVKAAGTGLTLTR-AEHVIHYDRPWNPA-----VEDQATDRAHRIG 1183 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R V V++LI + T+++ + + L K + D +L + + + Sbjct: 1184 QNRTVQVHHLITEGTVEDHISELLARKRALTDAVLTSGEGALTEL 1228 >gi|310639769|ref|YP_003944527.1| snf2-like protein [Paenibacillus polymyxa SC2] gi|309244719|gb|ADO54286.1| SNF2-like protein [Paenibacillus polymyxa SC2] Length = 987 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 73/238 (30%), Gaps = 41/238 (17%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAV--------------YYDEEK 46 Y + +EL +Q S + QL + Y + Sbjct: 740 LYDQIVKELMERMQKLEGIERKGAILSALTQLKQLCDHPALLTKGALLDAAASGYSQPDL 799 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-----------SDLARLQKAFPQGRT 93 K++ + ++++ ++ + +L + Sbjct: 800 EAVISRSSKLERILAMVKELREEGERCLIFTQYIGMGQMLQQVLAQELQEPVLYLNGSTS 859 Query: 94 LDKDPCTIQEWN------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I ++ + + + + G GLNL N + F WW+ Sbjct: 860 KSARDRMIDQFQSHTLSPDEQPSVFILSLKAGGVGLNLTA-ANHVFHFDRWWNPA----- 913 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +E R + G + V V+ I+ T++E + + L +K + D ++ + + + Sbjct: 914 VENQATDRAYRMGQTKDVQVHKFISLGTLEERIDEMLESKQQLSDQIITSTEGWITEL 971 >gi|254393251|ref|ZP_05008403.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|197706890|gb|EDY52702.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 759 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 69/225 (30%), Gaps = 28/225 (12%) Query: 3 QYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DE 54 Y R+ ++ Q+ N Y +E Sbjct: 527 LYEANVRDTLREITASSGIERRGLVLKLLQALRQICNTPTLYLKEPLEDAEPATLARRSG 586 Query: 55 KIKALEVIIEKANAAPI--IVAYHFNSD----------LARLQKAFPQGRTLDKDPCTIQ 102 K+ AL+ ++ A +V + R + G + + Sbjct: 587 KLAALDDLMSTLAARSEAALVFTGYVQMGRILEHHLRARGRSVRFLHGGTPPARRQELVD 646 Query: 103 EWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + P+L + G GL L ++ + W+ +E R + G Sbjct: 647 IFQHDPDPAPVLILSVKAAGTGLTLTR-AEHVIHYDRPWNPA-----VEDQATDRAHRIG 700 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R V V++LI + T+++ + + L K + D +L + + + Sbjct: 701 QNRTVQVHHLITEGTVEDHISELLARKRALTDAVLTSGEGALTEL 745 >gi|283795073|ref|ZP_06344226.1| Snf2 family protein [Clostridium sp. M62/1] gi|291077403|gb|EFE14767.1| Snf2 family protein [Clostridium sp. M62/1] Length = 254 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 77/209 (36%), Gaps = 24/209 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ +++ +LQ ++ + Q+ E K++ Sbjct: 39 VRLMESLEKQSDEELQKGK---LQILAELTRLRQICCAPEMLYENYSET---SCKVETCM 92 Query: 61 VIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGK 108 +I + + I++ F S + + +++N G Sbjct: 93 ELIHQAMSGNHKILLFSQFTSVFPILEKRLLQEKIPYYELTGQTSKENRMRMTEQFNSGD 152 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +P+ + G GLNL +I++ F WW+L R + G ++ V V+ Sbjct: 153 VPVFLISLKAGGTGLNLTA-ASIVIHFDPWWNLAAQ-----NQATDRAHRIGQEKQVTVF 206 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIAQNTI+E +++ + K + +L+ Sbjct: 207 KLIAQNTIEEKIIKLQQEKQKLSSQILDG 235 >gi|119613505|gb|EAW93099.1| hCG32740, isoform CRA_e [Homo sapiens] Length = 1356 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 76/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 K Y F +E+Y L GE S + ++ N + +E Sbjct: 774 KVYQNFVDSKEVYRILNGE----MQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEE 829 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 830 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTT 889 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I +N + I + G G+NL G N +V + W+ + Sbjct: 890 TIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPST-----DTQ 943 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 944 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 993 >gi|255534042|ref|YP_003094414.1| SNF2-like protein [Pedobacter heparinus DSM 2366] gi|255347026|gb|ACU06352.1| SNF2-related protein [Pedobacter heparinus DSM 2366] Length = 964 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 66/199 (33%), Gaps = 18/199 (9%) Query: 8 QRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +L + QLAN V DE E + + K Sbjct: 753 RNDLLNSMDDGTYAKKQVQLLQGLTALRQLANHPVMIDETYTSDSGKFENVVHTLDNVLK 812 Query: 66 ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 +++ F L ++ + G T ++ + + Sbjct: 813 -GGHKVLIFSQFVKHLNIFRQYLEEENISFAYLDGATKNRGEIVADFQKNTALKVFLISI 871 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + + WW+ QQ I+R + G + VF+Y IA++T+ Sbjct: 872 KAGGVGLNLTE-ADYVFILDPWWNPAVEQQAIDR-----THRIGQDKKVFIYKFIAKDTV 925 Query: 177 DELVLQRLRTKSTIQDLLL 195 +E +L K + L+ Sbjct: 926 EEKILALQNRKKRLASSLI 944 >gi|225352246|ref|ZP_03743269.1| hypothetical protein BIFPSEUDO_03862 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157493|gb|EEG70832.1| hypothetical protein BIFPSEUDO_03862 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 1158 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 26/213 (12%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y ++ L L + ++ ++ + K+ Sbjct: 936 KLYAAHEQRLRATLTKTKDADFNTKKIRILAEFTLLREICCDPRLVYADAKNA---SAKL 992 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW 104 A+ ++ + ++V F S L + + + E+ Sbjct: 993 DAICELVSTCMDESKKVLVFSQFTSFLDLIGTRLAEQGVDFYTITGETPKKRRVELVDEF 1052 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N +P+ + GLNL G +++V WW+ R + G + Sbjct: 1053 NGNDVPVFLISLKAGNTGLNL-VGASVVVHADPWWNAAAQ-----NQATDRAHRIGQTQD 1106 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY ++A++TI+E +L+ KS + + Sbjct: 1107 VNVYQIVAKDTIEERILKLQEKKSELAQQFTDG 1139 >gi|313124061|ref|YP_004034320.1| DNA/RNA helicase, superfamily ii, snf2 family protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280624|gb|ADQ61343.1| DNA/RNA helicase, superfamily II, SNF2 family protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 1185 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 75/215 (34%), Gaps = 28/215 (13%) Query: 2 KQYHK----FQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + ++ + E + + ++ E+ + EK Sbjct: 962 KLYDAEIARLKNKVMAEDDEGIKREQIEILAALTRIREICCDPGLLYEDYKGE---SEKR 1018 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW 104 A +I+ +++ F S L L++ + + + Sbjct: 1019 LACVDLIKSAIDGGHKVLLFSQFTSMLDLLEESLKADEIGFLRIDGQTPKARRLTLVNVF 1078 Query: 105 N--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N + + + G GLNL G + ++ + WW++ R + G + Sbjct: 1079 NHKDSPAKVFLISLKAGGTGLNLT-GADTVIHYDPWWNVAAQ-----NQATDRAHRIGQE 1132 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LIA++T++E +L KS + +L A Sbjct: 1133 KKVTVYKLIAKDTVEEAILDLQEAKSQLAQGILTA 1167 >gi|218666513|ref|YP_002425806.1| helicase, SNF2/RAD54 family [Acidithiobacillus ferrooxidans ATCC 23270] gi|218518726|gb|ACK79312.1| helicase, SNF2/RAD54 family [Acidithiobacillus ferrooxidans ATCC 23270] Length = 1381 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 68/209 (32%), Gaps = 26/209 (12%) Query: 4 YHKFQRELYCDL-----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y +R+ + Q + F+ ++ K + A K++ Sbjct: 1155 YEALRRQAIVEAEAAIAQSGSQAHFHILAQLTKLRRAACDPRLVSPNLDIVG---AKVRT 1211 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNE 106 + AN +V F L + + I+++ Sbjct: 1212 FADLAGDLSANGHKALVFSQFVDFLTLLREPLDAAGIPYQYLDGSTPVADRERRIRDFQA 1271 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K L + G GLNL + ++ WW+ E + R + G R V Sbjct: 1272 EKGNLFLISLKAGGFGLNLTA-ADYVIITDPWWNPAA-----EDQAMGRAHRIGQLRPVT 1325 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L+AQ T++E ++ K + D +L Sbjct: 1326 VYRLVAQGTLEEQIIALHHDKRALADGVL 1354 >gi|115387749|ref|XP_001211380.1| hypothetical protein ATEG_02202 [Aspergillus terreus NIH2624] gi|114195464|gb|EAU37164.1| hypothetical protein ATEG_02202 [Aspergillus terreus NIH2624] Length = 1192 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 72/222 (32%), Gaps = 32/222 (14%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKE------VHD 53 K QR+ Y L + +++ + ++ N + + Sbjct: 671 KLQRQSYKAFLASQEMQSILRGRRQALYGIDILRKICNHPDLQSHKFSAHKAAYGGAEKS 730 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARL-----------QKAFPQGRTLDKDPCT 100 K++ + ++ + ++ L L + + + Sbjct: 731 GKMQVVRSLLELWRDTGHKTLLFAQHRIMLDILEKFVNSLSGINYRRMDGTTPIAQRQSM 790 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+N + + L G G+NL G + ++ + W+ R + Sbjct: 791 VDEFNKDPSLHLFLLTTKVGGLGVNLT-GADRVIIYDPDWNPSTDM-----QARERAWRL 844 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 845 GQKREVTIYRLMTAGTIEEKIYHRQVFKQFLTNKILRDPKQR 886 >gi|95007492|emb|CAJ20716.1| SWI/SNF family transcriptional activator protein, putative [Toxoplasma gondii RH] Length = 1383 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 77/221 (34%), Gaps = 29/221 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYD--------EEKHWKEVH 52 + Y + LQG + ++ + N +D + Sbjct: 709 QLYKDLLTKNVAALQGAEGAGRTQLLNLAMQLRKACNHPYLFDGYESEHADPFGEHVIEN 768 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K++ + ++ + ++ + L+ + D+ Sbjct: 769 AGKLRFCDRLLRRLIQENRRCLIFTQMTKMIDILEDYCRIRLFKYCRIDGNTSGDERDRQ 828 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N IP+ + G G+NL + ++ + W+ + ++ + R + Sbjct: 829 IEAFNAPGSDIPIFLLSTRAGGLGINL-ATADTVILYDSDWNPQ-----VDLQAMDRVHR 882 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K AV VY L+ ++TI++ +++R K + ++ + Sbjct: 883 IGQKSAVNVYRLVHEHTIEQKIIERAMLKLQLDTAIIQQGR 923 >gi|294055867|ref|YP_003549525.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] gi|293615200|gb|ADE55355.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] Length = 843 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 73/216 (33%), Gaps = 25/216 (11%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEK---HWKEVHD 53 + Y + +L + +A N + + Q E Sbjct: 611 QVYEGLLNKGREELGDDLQAAMQSQATNFFTLLTRLRQACCDPGLIPEVAAPLEQSGKIQ 670 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQ 102 + LE +E A A +++ F L RL+ G+T D+ Sbjct: 671 TLLIHLEEALEGAGARKVVIFSQFVQLLTRLKPEIKAKFPKVALLELTGQTRDRSKPVET 730 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ ++ + G G+ L + + WW+ +E V R + G + Sbjct: 731 FQNKDGPAVILVSLRAGGTGITLHA-ADYVFLLDPWWNPA-----VENQAVDRVHRIGQQ 784 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + VFVY +I Q TI+E + R K + + L L Sbjct: 785 KRVFVYRMITQGTIEERIQHLKREKRELFENTLGNL 820 >gi|170761655|ref|YP_001787000.1| SNF2 family helicase [Clostridium botulinum A3 str. Loch Maree] gi|169408644|gb|ACA57055.1| helicase, Snf2 family [Clostridium botulinum A3 str. Loch Maree] Length = 1097 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 72/209 (34%), Gaps = 22/209 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + + + L+ + S + QL +E K++ Sbjct: 877 RIYKAYMKSIKEKLKNNKEDKITIFSYLTRLRQLCLDPSIIIDEYK---GGSSKLRIAME 933 Query: 62 IIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN-EGK 108 ++++ I++ F S L + + ++N Sbjct: 934 LVQEGVDEGKKILLFSQFTSVLKNISKLLEKECIEYFYLDGSTNASERIKLVNKFNKSSH 993 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G GLNL N+++ F WW+ IE R + G K V V Sbjct: 994 VKIFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----IEDQATDRAHRIGQKNLVQVI 1047 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ + TI+E ++ K + + ++N+ Sbjct: 1048 KLVCKGTIEEKIITLQEDKKELINDVMNS 1076 >gi|326471229|gb|EGD95238.1| DNA repair and recombination protein RAD26 [Trichophyton tonsurans CBS 112818] Length = 1225 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYD--------EEKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 675 KVQRAAYEAFLASGEMSSILRGRREALYGIDMLRKICNHPDLTQHKVLSTKTDYNYGSGA 734 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDK-DP 98 K++ ++ ++ K ++ L L+ G T K Sbjct: 735 KSGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKVRQ 794 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N + + + G G+NL G + ++ + W+ + R Sbjct: 795 SMVDEFNNDPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAW 848 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 849 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 892 >gi|224049311|ref|XP_002191591.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Taeniopygia guttata] Length = 1093 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 450 VKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPG 509 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 510 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 569 Query: 93 ----TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +I +N+ + + G G+NL ++++ + W+ + Sbjct: 570 DGQTPHNERQASINAFNDPDSSKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 624 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ K Sbjct: 625 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGK 676 >gi|4557565|ref|NP_000115.1| DNA excision repair protein ERCC-6 [Homo sapiens] gi|416959|sp|Q03468|ERCC6_HUMAN RecName: Full=DNA excision repair protein ERCC-6; AltName: Full=ATP-dependent helicase ERCC6; AltName: Full=Cockayne syndrome protein CSB gi|182181|gb|AAA52397.1| excision repair protein [Homo sapiens] gi|27501924|gb|AAO13487.1| excision repair cross-complementing rodent repair deficiency, complementation group 6 [Homo sapiens] gi|55661841|emb|CAH70291.1| excision repair cross-complementing rodent repair deficiency, complementation group 6 [Homo sapiens] gi|119613500|gb|EAW93094.1| hCG32740, isoform CRA_a [Homo sapiens] gi|119613503|gb|EAW93097.1| hCG32740, isoform CRA_a [Homo sapiens] Length = 1493 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 76/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 K Y F +E+Y L GE S + ++ N + +E Sbjct: 774 KVYQNFVDSKEVYRILNGE----MQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEE 829 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 830 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTT 889 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I +N + I + G G+NL G N +V + W+ + Sbjct: 890 TIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPST-----DTQ 943 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 944 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 993 >gi|149200413|ref|ZP_01877429.1| DEAD/DEAH box helicase-like protein [Lentisphaera araneosa HTCC2155] gi|149136482|gb|EDM24919.1| DEAD/DEAH box helicase-like protein [Lentisphaera araneosa HTCC2155] Length = 1041 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 71/209 (33%), Gaps = 19/209 (9%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +E D + N + + Q+ +E+ E + Sbjct: 822 KIYREMHAYYSQEKQKDDKETPGGKGNMLAALTRLRQVVCHPYLVNEDYRHIESAKINLL 881 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGK 108 ++ A+ A ++ F L G T D+ + K Sbjct: 882 ISQLEQVFASGAKALIFSQFTQFLDLIEEAIQMNKWNYTRLDGSTKDRQVPVQEFNENEK 941 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + G GLNL + WW+ Q I+R + G ++AV Y Sbjct: 942 CRFFLISLKAGGTGLNLTQ-AQYVYIMDPWWNPAAESQAIDR-----AYRIGQEKAVSAY 995 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++A++TI++ +LQ KS + ++ A Sbjct: 996 RIVAKDTIEDKLLQLQAEKSQLVQDVVEA 1024 >gi|313499735|gb|ADR61101.1| Non-specific serine/threonine protein kinase [Pseudomonas putida BIRD-1] Length = 1110 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 18/207 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE---EKHWKEVHDEKIKALEV 61 + R+ G +K Q+ + + + + Sbjct: 883 DQKVRDEIAR-NGAARSQIVILDALLKLRQVCCDLRLVKGVESKGNQADKGKLGALLEML 941 Query: 62 IIEKANAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + +++ F S L R + +Q++ +G+ + Sbjct: 942 EELLSEGRRVLLFSQFTSMLALIEQELEKRKIRYSLLTGDTRDRRTPVQQFQQGESEVFL 1001 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ F WW+ E R + G + VFV+ LI + Sbjct: 1002 ISLKAGGVGLNLTA-ADTVIHFDPWWNPAS-----ENQATDRAYRIGQDKPVFVFKLITR 1055 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKK 200 T++E + + K+ + LL+ + Sbjct: 1056 GTVEEKIQLLQQEKAALAASLLDGGQA 1082 >gi|118089929|ref|XP_001234486.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Gallus gallus] Length = 1198 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 555 VKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPG 614 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 615 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 674 Query: 93 ----TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 675 DGQTPHDERQASINAYNEPGSSKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 729 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 730 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 781 >gi|124024526|ref|YP_001018833.1| SNF2 family DNA/RNA helicase [Prochlorococcus marinus str. MIT 9303] gi|123964812|gb|ABM79568.1| Superfamily II DNA/RNA helicases, SNF2 family [Prochlorococcus marinus str. MIT 9303] Length = 1099 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 62/217 (28%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEK----- 55 Y E + + + Q+ N +EK + ++ Sbjct: 869 LYRNTVDETLEAIARAPSGQRHGKVLGLLTRLKQICNHPALALKEKTVAKGFMDRSAKLL 928 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEW 104 + ++ F L+ + + + + Sbjct: 929 RLEEILEEVIEAGDRALLFTQFAEWGHLLKAYLQQRWRFEVPFLHGSTSKTERQAMVDRF 988 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E L + G GLNL + + WW+ +E R + G Sbjct: 989 QEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHVDRWWNPA-----VENQATDRAYRIGQT 1042 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ I +++E + + +R KS + + ++ + + Sbjct: 1043 NRVMVHKFITSGSVEEKIDRMIREKSRLAEDIIGSGE 1079 >gi|114635114|ref|XP_507781.2| PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 6 [Pan troglodytes] Length = 1491 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 76/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 K Y F +E+Y L GE S + ++ N + +E Sbjct: 772 KVYQNFVDSKEVYRILNGE----MQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEE 827 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 828 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTT 887 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I +N + I + G G+NL G N +V + W+ + Sbjct: 888 TIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPST-----DTQ 941 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 942 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 991 >gi|297686445|ref|XP_002820759.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6-like [Pongo abelii] Length = 1493 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 76/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 K Y F +E+Y L GE S + ++ N + +E Sbjct: 774 KVYQNFVDSKEVYRILNGE----MQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEE 829 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 830 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTT 889 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I +N + I + G G+NL G N +V + W+ + Sbjct: 890 TIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPST-----DTQ 943 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 944 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 993 >gi|284174757|ref|ZP_06388726.1| hypothetical protein Ssol98_08906 [Sulfolobus solfataricus 98/2] Length = 319 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 69/211 (32%), Gaps = 23/211 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y L+ ++ S +K Q+ + K+ Sbjct: 92 MYKAEVENLFNNIDSVTGIKRKGMILSTLLKLKQIVDHPALLK-GGEQSVRRSGKMIRTM 150 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------------RTLDKDPCTIQEWNE 106 IIE+ I + F ++ + ++D + N Sbjct: 151 EIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNN 210 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL N ++ F WW+ +E R + G R V Sbjct: 211 PSVKFIVLSVKAGGFGINLTS-ANRVIHFDRWWNPA-----VEDQATDRVYRIGQTRNVI 264 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI+ T++E + Q L K ++ ++++ Sbjct: 265 VHKLISVGTLEEKIDQLLAFKRSLFKDIISS 295 >gi|295662396|ref|XP_002791752.1| DNA repair and recombination protein RAD26 [Paracoccidioides brasiliensis Pb01] gi|226279878|gb|EEH35444.1| DNA repair and recombination protein RAD26 [Paracoccidioides brasiliensis Pb01] Length = 1234 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 71/224 (31%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDE--------EKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 704 KIQRSAYQAFLGSNEMSSILRGRREALYGIDMLRKICNHPDLPEHKTLSTKPGYNYGSAA 763 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDK-DP 98 K++ ++ ++ K ++ L + G T K Sbjct: 764 KSGKMQVVKALLELWKETGHKSLLFAQHRIMLDILERFIKSMTGFKYQRMDGNTPIKLRQ 823 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N +I + G G+NL G + ++ + W+ + R Sbjct: 824 SLVDEFNNNPEIHIFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAW 877 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 878 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 921 >gi|150017526|ref|YP_001309780.1| non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] gi|149903991|gb|ABR34824.1| Non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] Length = 1057 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 76/211 (36%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + +++ ++ E + S K QL ++ K++ Sbjct: 835 KVYASYVKDIKEKMEAENFERDKITIFSYLTKLRQLCLDPSIVVDKYT---GGSAKLEEA 891 Query: 60 EVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-E 106 +IE N I++ F S L K + E+N Sbjct: 892 LNLIEDNIANGHKILLFSQFTSVLNNISKELSENKIEHMYLDGSTKATKRSELVDEFNGS 951 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K + + G GLNL +I++ F WW+ +E R + G K V Sbjct: 952 DKYKVFLISLKAGGTGLNLTS-ADIIIHFDPWWNPA-----VEDQATDRAHRIGQKNVVQ 1005 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI++ TI+E ++ +K + + +L + Sbjct: 1006 VFKLISEGTIEERIINLQESKKELINGILES 1036 >gi|295100101|emb|CBK89190.1| Superfamily II DNA/RNA helicases, SNF2 family [Eubacterium cylindroides T2-87] Length = 473 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 21/201 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--A 66 +E+ ++ + + + K Q+ A + + KI A +I+ Sbjct: 263 KEMQAKMKEVHFDRIAILAMLTKLRQICCDARLVYDN---IKEPSTKINATISLIKTLTE 319 Query: 67 NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 N I++ F S L ++ + +NE + Sbjct: 320 NNKKILLFSAFTSLLDLVSNQLDKEQISYYMLTGSTNKEERRKLVNNFNEDDTRVFLISL 379 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL ++ WW+L R + G V VY +I +++I Sbjct: 380 KAGGTGLNLTS-AEAVIHIDPWWNLSAQ-----NQATDRAHRIGQNANVQVYRMIMKDSI 433 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +L+ K+ + D + Sbjct: 434 EEKILKMQERKANLADSFVEG 454 >gi|26988870|ref|NP_744295.1| Snf2/Rad54 family helicase [Pseudomonas putida KT2440] gi|24983677|gb|AAN67759.1|AE016407_3 helicase, SNF2/RAD54 family [Pseudomonas putida KT2440] Length = 666 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 18/207 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE---EKHWKEVHDEKIKALEV 61 + R+ G +K Q+ + + + + Sbjct: 444 DQKVRDEIAR-NGAARSQIVILDALLKLRQVCCDLRLVKGVESKGNQADKGKLGALLEML 502 Query: 62 IIEKANAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + +++ F S L R + +Q++ +G+ + Sbjct: 503 EELLSEGRRVLLFSQFTSMLALIEQELEKRKIRYSLLTGDTRDRRTPVQQFQQGESEVFL 562 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ F WW+ E R + G + VFV+ LI + Sbjct: 563 ISLKAGGVGLNLTA-ADTVIHFDPWWNPAS-----ENQATDRAYRIGQDKPVFVFKLITR 616 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKK 200 T++E + + K+ + LL+ + Sbjct: 617 GTVEEKIQLLQQEKAALAASLLDGGQA 643 >gi|237785888|ref|YP_002906593.1| putative DNA/RNA helicase [Corynebacterium kroppenstedtii DSM 44385] gi|237758800|gb|ACR18050.1| putative DNA/RNA helicase [Corynebacterium kroppenstedtii DSM 44385] Length = 1065 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 69/219 (31%), Gaps = 27/219 (12%) Query: 3 QYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYY----DEEKHWKEVHDEK 55 Y + +L+ G Q+ N Y K Sbjct: 806 LYKAVTATVAKELESKQGGMDRRGLIFKLLTGLKQICNHPAQYLGDDSPFLDGTHHRSGK 865 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 + E ++++ +++ F L+ F + + Sbjct: 866 VATAEPLVDEALQQGRKVLIFTQFVVFGNMLKTYFNNRYGIDVPFLNGSVERKERDRMVN 925 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N P++ + G GLNL G ++++ WW+ +E R + G Sbjct: 926 TFNSPAGPPIMILSLRAGGTGLNLT-GASVVIHMDRWWNPA-----VENQATDRAYRIGQ 979 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V VY LI++ TI+E + + K + ++ + Sbjct: 980 EHDVSVYKLISKGTIEEKINDIIEGKLQLASAVVGTGEA 1018 >gi|148697110|gb|EDL29057.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_c [Mus musculus] Length = 1087 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 458 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 517 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 518 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 577 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 578 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 632 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 633 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 684 >gi|284041008|ref|YP_003390938.1| SNF2-related protein [Spirosoma linguale DSM 74] gi|283820301|gb|ADB42139.1| SNF2-related protein [Spirosoma linguale DSM 74] Length = 1003 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 77/210 (36%), Gaps = 26/210 (12%) Query: 3 QYHKFQ---RELYCD-LQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 QY + + R L + ++ E I K Q+AN D E K+ Sbjct: 783 QYEEAKSYYRNLILERIEEEGIAKSQMVVLQGLTKLRQIANHPRMVD---AEYEGDSGKL 839 Query: 57 KALEVIIE--KANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWN 105 + + +E ++V F L +++ + G T+D+ Sbjct: 840 DDMLMRLESAMTENHKVLVFSQFIKHLTVVRQYLKEKNIKYAYLDGSTVDRQSQVELFQT 899 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + L + G G NL + + WW+ IE V R + G ++ V Sbjct: 900 DDSVKLFLISLKAGGLGHNLTA-ADYVFILDPWWNPA-----IEAQAVDRAHRIGQQKTV 953 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 F Y IA+NT++E +L R K + L+ Sbjct: 954 FTYKFIAKNTVEEKILSLQRAKQQLAGSLI 983 >gi|16332119|ref|NP_442847.1| Snf2/Rad54 family helicase [Synechocystis sp. PCC 6803] gi|1653748|dbj|BAA18659.1| helicase of the snf2/rad54 family [Synechocystis sp. PCC 6803] Length = 1039 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 70/215 (32%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCL--QLANGAVYYDEEKHWKEVH-DEKIKAL 59 Y + E + + T+ Q+ N ++ H K+ L Sbjct: 801 LYQQLVEESLQAIADSEGIQRHGLVLTLLTKLKQVCNHPDLLLKKPAITHGHQSGKLIRL 860 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNE 106 ++E+ + +++ F S L+ G ++ ++ + + Sbjct: 861 AEMLEEIISEGDRVLIFTQFASWGHLLKPYLEKYFNQEVLYLHGGTPAEQRQALVERFQQ 920 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 L + G GLNL N + WW+ +E R + G R Sbjct: 921 DPNSPYLFILSLKAGGTGLNLTR-ANHVFHVDRWWNPA-----VENQATDRAFRIGQTRN 974 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ + T++E + + K + + ++A + Sbjct: 975 VQVHKFVCTGTLEEKINAMMADKQQLAEQTVDAGE 1009 >gi|148697109|gb|EDL29056.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_b [Mus musculus] Length = 1110 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 465 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 524 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 525 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 584 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 585 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 639 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 640 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 691 >gi|326427315|gb|EGD72885.1| hypothetical protein PTSG_12193 [Salpingoeca sp. ATCC 50818] Length = 2049 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 79/231 (34%), Gaps = 35/231 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY----------DEEKHWKEV 51 + Y + Y L S + +N + DE Sbjct: 1348 QLYKHALEKNYTVLTNAK-SKKGLKSLLTNLRKCSNHPYLFEGTEPEFPTLDETMERLVK 1406 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPC 99 K+ ++ ++ K A+ +++ + L L+ F + Sbjct: 1407 ASGKLLLMDKMLTKLKASGHRVLIFSQWTHVLDILEDLFVYRKHKFYRLDGDTDILDREQ 1466 Query: 100 TIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N + + G G+NL + + + W+ ++ + R Sbjct: 1467 RITDFNRPNSDVFAFLLSTRAGGLGINL-NTADTVFIYDSDWNP-----HMDNQAIARAH 1520 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN----ALKKETIH 204 + G KR V VY L+A+ T+DE ++++ R K + + ++ A+ + + Sbjct: 1521 RIGQKRLVMVYRLVAKGTVDEKIVEQARKKLALDEAVVEQKHKAMDAKDLE 1571 >gi|115433988|ref|NP_001041752.1| Os01g0102800 [Oryza sativa Japonica Group] gi|15128457|dbj|BAB62641.1| putative DNA repair and recombination protein [Oryza sativa Japonica Group] gi|20804446|dbj|BAB92143.1| putative DNA repair and recombination protein [Oryza sativa Japonica Group] gi|39652280|dbj|BAD04853.1| Cockayne syndrome group B [Oryza sativa Japonica Group] gi|113531283|dbj|BAF03666.1| Os01g0102800 [Oryza sativa Japonica Group] Length = 1187 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 67/215 (31%), Gaps = 30/215 (13%) Query: 11 LYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKAL 59 L +E NS ++ N + E + K+K + Sbjct: 659 YRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLLEREHAAQNPDYGNPERSGKMKVV 718 Query: 60 EVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP----------CTIQEWNE- 106 E ++ K +++ L ++ + I E+N Sbjct: 719 EQVLKVWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRRMDGLTPAKQRMALIDEFNNT 778 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +I + G G NL G N ++ + W+ R + G R V Sbjct: 779 DEIFIFILTTKVGGLGTNLT-GANRIIIYDPDWNPSTDM-----QARERAWRIGQTRDVT 832 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY LI + TI+E V R K + + +L ++ Sbjct: 833 VYRLITRGTIEEKVYHRQIYKHFLTNKVLKDPQQR 867 >gi|156098278|ref|XP_001615171.1| helicase [Plasmodium vivax SaI-1] gi|148804045|gb|EDL45444.1| helicase, putative [Plasmodium vivax] Length = 1399 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 77/224 (34%), Gaps = 27/224 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DE 54 K Y + + + ++ + N +D + + Sbjct: 562 KLYSDILSKNIDVINAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLIETSG 621 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ K + +++ L + D+ I Sbjct: 622 KMSLLDKLLPRLKKENSRVLLFSQMTRVLDIIDDYCRWKNYEYLRIDGSTVGDERQIRIN 681 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++NE + + G G+NL +I++ F ++ + ++ + R + G Sbjct: 682 QFNEPNSKYFIFLLSTRAGGIGINLTT-ADIVILFDSDYNPQ-----MDIQAMDRAHRIG 735 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 K+ V VY + QN+++E +++R K + L++ K H Sbjct: 736 QKKKVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNH 779 >gi|145602035|ref|XP_359538.2| hypothetical protein MGG_05239 [Magnaporthe oryzae 70-15] gi|145010485|gb|EDJ95141.1| hypothetical protein MGG_05239 [Magnaporthe oryzae 70-15] Length = 1163 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 68/223 (30%), Gaps = 31/223 (13%) Query: 2 KQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------HD 53 + Y +F + + ++ ++ N + Sbjct: 642 QAYEQFLASQAMDQILSGTRKS---LFGIDYLRKVCNHPDLVEPSLRNDHHYNWGSANKS 698 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCT 100 K++ ++ ++ K ++ L L+ + Sbjct: 699 GKMQVVKALLQMWKKFGHKTLLFSQGTQMLDILEDFVRKQDDITYLRMDGKTAIKDRQAM 758 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++N I L G G NL G + ++ + W+ + R + Sbjct: 759 VDQFNNSPGIDLFLLTTKVGGLGTNLT-GADRVIIYDPDWNPST-----DVQARERAWRL 812 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G K+ V +Y L+ TI+E + QR K + + +L + T Sbjct: 813 GQKKEVTIYRLMTAGTIEEKIYQRQIFKQFLTNKVLKDPSQRT 855 >gi|160901778|ref|YP_001567359.1| non-specific serine/threonine protein kinase [Petrotoga mobilis SJ95] gi|160359422|gb|ABX31036.1| Non-specific serine/threonine protein kinase [Petrotoga mobilis SJ95] Length = 1152 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 20/185 (10%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD-- 80 Q+ N V Y ++ K + L +++ N +++ + Sbjct: 951 ILKMLTSLKQICNHPVNYTKKGVPLPDDSGKTEKLLDLLQNIVDNNEKVVLFTQYKEMGD 1010 Query: 81 ---------LARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGN 130 + F G K I ++ P++ + G GLNL N Sbjct: 1011 ILTKILADNIKIEPLFFHGGLNRKKRDKMINDFQTKHRYPIMILSLKAGGTGLNLTA-AN 1069 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + LWW+ +E R + G + V V+ I T +E + + L K + Sbjct: 1070 HVIHYDLWWNPA-----VESQATDRTFRIGQTKDVIVHRFITLETFEEKINEMLEKKKEL 1124 Query: 191 QDLLL 195 + ++ Sbjct: 1125 SENII 1129 >gi|38233618|ref|NP_939385.1| SNF2/RAD54 family protein [Corynebacterium diphtheriae NCTC 13129] gi|38199878|emb|CAE49544.1| SNF2/RAD54 family protein [Corynebacterium diphtheriae] Length = 1029 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y + + L + S K Q+ N ++ + + K+ Sbjct: 798 LYKAYVDSVKTQLDQAEGMNKRGLVLSALTKIKQICNHPAHFLGDGSAMTIKGKHRSGKV 857 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQE 103 L +I + +++ + + L G + ++E Sbjct: 858 AELMNLINDAVDSDQKLLIFTQYRAFGDLLVPYLSDYFGTTIPFLHGGVSKTGRDRMVEE 917 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + P + + G GLNL +I+V WW+ +E R + G + Sbjct: 918 FQTPDGPPAMILSLKAGGTGLNLTN-ASIVVHMDRWWNPA-----VENQATDRAFRIGQR 971 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V VY +I T++E + L K+ + +++ + Sbjct: 972 KDVTVYKMITAGTLEESIQDILDGKTQLASAVVSEGEG 1009 >gi|148548802|ref|YP_001268904.1| non-specific serine/threonine protein kinase [Pseudomonas putida F1] gi|148512860|gb|ABQ79720.1| Non-specific serine/threonine protein kinase [Pseudomonas putida F1] Length = 1105 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 18/207 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE---EKHWKEVHDEKIKALEV 61 + R+ G +K Q+ + + + + Sbjct: 883 DQKVRDEIAR-NGAARSQIVILDALLKLRQVCCDLRLVKGVESKGNQADKGKLGALLEML 941 Query: 62 IIEKANAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + +++ F S L R + +Q++ +G+ + Sbjct: 942 EELLSEGRRVLLFSQFTSMLALIEQELEKRKIRYSLLTGDTRDRRTPVQQFQQGESEVFL 1001 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + ++ F WW+ E R + G + VFV+ LI + Sbjct: 1002 ISLKAGGVGLNLTA-ADTVIHFDPWWNPAS-----ENQATDRAYRIGQDKPVFVFKLITR 1055 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKK 200 T++E + + K+ + LL+ + Sbjct: 1056 GTVEEKIQLLQQEKAALAASLLDGGQA 1082 >gi|326428031|gb|EGD73601.1| SNF2 family DNA-dependent ATPase [Salpingoeca sp. ATCC 50818] Length = 2192 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 75/222 (33%), Gaps = 34/222 (15%) Query: 2 KQYHK-FQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWK 49 K Y +++ L +++G + + ++ + N +D Sbjct: 333 KYYKAILEKDVHGLLAEMRGRSKTRL--LNTIMQLRKACNHPYLFDGVEPGPPFTNGPHL 390 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 K+ L +++K A + +++ N L + Sbjct: 391 WQSSGKMIILHKLLQKLKAQGSRVLIFSQMNRMLDLIHDYCFSQGYKVCQIDGSMNALDR 450 Query: 98 PCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+ + E + + G GLNL + ++ + W+ + + R Sbjct: 451 QEAIERFQEDDSDVFAFLLSTRAGGLGLNLTK-ADAVILYDSDWNP-----FADIQAIDR 504 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G +AV VY LI NT+DE + QR K + L+L Sbjct: 505 AHRIGQTKAVKVYRLITDNTVDEHIQQRAEAKLYLNALILQG 546 >gi|52076609|dbj|BAD45511.1| putative RAD26 [Oryza sativa Japonica Group] Length = 789 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 67/215 (31%), Gaps = 30/215 (13%) Query: 11 LYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKAL 59 L +E NS ++ N + E + K+K + Sbjct: 261 YRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLLEREHAAQNPDYGNPERSGKMKVV 320 Query: 60 EVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP----------CTIQEWNE- 106 E ++ K +++ L ++ + I E+N Sbjct: 321 EQVLKVWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRRMDGLTPAKQRMALIDEFNNT 380 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +I + G G NL G N ++ + W+ R + G R V Sbjct: 381 DEIFIFILTTKVGGLGTNLT-GANRIIIYDPDWNPSTDM-----QARERAWRIGQTRDVT 434 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY LI + TI+E V R K + + +L ++ Sbjct: 435 VYRLITRGTIEEKVYHRQIYKHFLTNKVLKDPQQR 469 >gi|268610658|ref|ZP_06144385.1| SNF2 domain-containing protein [Ruminococcus flavefaciens FD-1] Length = 417 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 58/174 (33%), Positives = 94/174 (54%), Gaps = 7/174 (4%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y K ++E L +++ A N+A K +QLA+G V YD+ +H+ K+ ALE Sbjct: 249 IKAYRKLEKEYTLPLLHDDVSAANAAVLCGKLVQLASGCV-YDDGGTPSIIHNRKLDALE 307 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++E N P++VAY + + R++ K I +WN+GKIP+ P+S G Sbjct: 308 DLLEAQNGKPVLVAYWYQHERERIK--ARFDVREIKTDQDIADWNDGKIPVALIQPSSAG 365 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 HGLNLQ GG+ +++F++ W LE +QQ R+ Q V +++L A Sbjct: 366 HGLNLQDGGSTIIWFTMPWSLELYQQTNARLWR----QGQNADTVVIHHLTAAG 415 >gi|126522468|gb|AAI32448.1| Ercc6 protein [Mus musculus] Length = 1157 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 78/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------DEEKH 47 K Y F + +Y L GEN S V ++ N + DE + Sbjct: 446 KVYQNFIDSKAVYRILNGEN----QIFSGLVALRKICNHPDLFSGGPKNASGPPEDELEE 501 Query: 48 WKEVH---DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 + H K+ +E ++ +++ L L+ Sbjct: 502 EQFGHWRRSGKMIVVESLLKIWHRQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTT 561 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I ++N + I + G G+NL G N ++ + W+ + Sbjct: 562 TIASRQPLITKYNEDTSIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPST-----DTQ 615 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 616 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 665 >gi|300811728|ref|ZP_07092202.1| SNF2 family N-terminal domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497304|gb|EFK32352.1| SNF2 family N-terminal domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 1185 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 28/215 (13%) Query: 2 KQYHK----FQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y + ++ + E + + ++ E+ + EK Sbjct: 962 KLYDAEIARLKNKVMAEDDEGIKREQIEILAALTRIREICCDPGLLYEDYKGE---SEKR 1018 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW 104 A +I+ +++ F S L L++ K + + Sbjct: 1019 LACVDLIKSAIDGGHKVLLFSQFTSMLDLLEESLKAEEIVFLRIDGQTPKAKRLTLVNVF 1078 Query: 105 N--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N + + + G GLNL G + ++ + WW++ R + G + Sbjct: 1079 NHKDSPAKVFLISLKAGGTGLNLT-GADTVIHYDPWWNVAAQ-----NQATDRAHRIGQE 1132 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LIA++T++E +L KS + +L A Sbjct: 1133 KKVTVYKLIAKDTVEEAILDLQEAKSQLAQGILTA 1167 >gi|125833380|ref|XP_688972.2| PREDICTED: DNA excision repair protein ERCC-6 [Danio rerio] Length = 1390 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 75/231 (32%), Gaps = 41/231 (17%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY----------------D 43 + Y F +E+Y L G+ S + ++ N + + Sbjct: 751 QVYQTFLDSKEVYQILNGD----MQVFSGLIALRKICNHPDLFTGGPRLLRGIPHDQLTE 806 Query: 44 EEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQG 91 EE K+ +E ++ +++ L L+ Sbjct: 807 EEHFGYWKRSGKMIVVESLLRLWHKQGHRVLLFTQSRQMLEILEVFVKENGFSYLKMDGT 866 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T+ I ++N I + G G+NL G N +V + W+ + Sbjct: 867 TTIASRQPLIAQFNQNKDIFVFILTTRVGGLGVNLT-GANRVVIYDPDWNPST-----DT 920 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 921 QARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 971 >gi|326485451|gb|EGE09461.1| DNA repair and recombination protein RAD26 [Trichophyton equinum CBS 127.97] Length = 1035 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 34/224 (15%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYD--------EEKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 485 KVQRAAYEAFLASGEMSSILRGRREALYGIDMLRKICNHPDLTQHKVLSTKTDYNYGSGA 544 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDK-DP 98 K++ ++ ++ K ++ L L+ G T K Sbjct: 545 KSGKMQVVKSLLELWKDTGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDGNTPIKVRQ 604 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N + + + G G+NL G + ++ + W+ + R Sbjct: 605 SMVDEFNNDPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAW 658 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L K+ Sbjct: 659 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQR 702 >gi|298705975|emb|CBJ29096.1| SNF2 family protein [Ectocarpus siliculosus] Length = 1288 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 71/251 (28%), Gaps = 62/251 (24%) Query: 8 QRELYCDLQGENIEAFNSASKTVK-------CLQLANGAVYYDEEKH------------- 47 QR LY + E + S+T++ +L N Sbjct: 681 QRRLYSEFLEST-EVKSVLSRTMRAFRAIGILRKLCNHPDLVCRFGDSVVTRLASHQIWG 739 Query: 48 ----------------------WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDL-- 81 + K+ L+ I+ +++ L Sbjct: 740 GDSDASEKEEDDTAEESKSDNDHEVQRSGKLLVLQQILPLWHKQGHRVLLFSQTRQMLSI 799 Query: 82 --------ARLQKAFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNIL 132 + I +N + ++ + G G+NL G + + Sbjct: 800 IERFVVNNEWSYGRLDGSTPVGNRQTLIDRFNNDESMFIMLLTTRTGGVGVNLT-GADRV 858 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + F W+ R + G +R V VY L+ TI+E + R K+ + + Sbjct: 859 ILFDPDWNPSTDM-----QARERSWRVGQRRQVTVYRLVTAGTIEEKIYHRQIFKTALTN 913 Query: 193 LLLNALKKETI 203 +L K+ + Sbjct: 914 RVLQDPKQRRM 924 >gi|254432066|ref|ZP_05045769.1| SNF2 family N-terminal domain protein [Cyanobium sp. PCC 7001] gi|197626519|gb|EDY39078.1| SNF2 family N-terminal domain protein [Cyanobium sp. PCC 7001] Length = 1033 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 69/224 (30%), Gaps = 32/224 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHW---------KE 50 K Y + + + + + + K Q+ N E Sbjct: 797 KLYSRTVDDSLEAIARSPLGQKHGQVLALLTKLKQICNHPALALGESAEAASSAGPASFA 856 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKD 97 K++ LE I+E+ ++ F + + + Sbjct: 857 ARSAKVQRLEEILEEVIEAGDRALLFTQFAEWGLLLQAHLQKRWRQEVPFLYGSTSKTER 916 Query: 98 PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + E L + G GLNL + + WW+ +E R Sbjct: 917 QAMVDRFQEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHIDRWWNPA-----VENQATDR 970 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V V+ I +++E V + +R KS + + ++ + + Sbjct: 971 AYRIGQQNRVMVHKFITSGSVEEKVDRMIREKSKLAEEIVGSGE 1014 >gi|296415159|ref|XP_002837259.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633120|emb|CAZ81450.1| unnamed protein product [Tuber melanosporum] Length = 1362 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 78/226 (34%), Gaps = 34/226 (15%) Query: 2 KQYHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD---- 53 K Y + + G + ++ ++ +L N ++E + Sbjct: 732 KLYQQMMNNGILYVNEPDKGGKLGVRGLSNMIMQLRKLCNHPFVFEEVESAINPTKVNND 791 Query: 54 ------EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLD 95 K + L+ ++ K +++ + + ++ D Sbjct: 792 ALWRTAGKFELLDRLLPKFFATRHRVLMFFQMTQIMNIMEDFLHLRGFRYLRLDGSTKAD 851 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++E+N P + + G GLNLQ + ++ + W+ + + Sbjct: 852 DRSALLKEFNAPDSPYFIFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQ 905 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R + K I ++ A K Sbjct: 906 DRAHRIGQKNEVRILRLITSNSVEERILERAQYKLDIDGKVIQAGK 951 >gi|15896248|ref|NP_349597.1| SNF2 family DNA/RNA helicase [Clostridium acetobutylicum ATCC 824] gi|15026052|gb|AAK80937.1|AE007796_7 Superfamily II DNA/RNA helicase, SNF2 family [Clostridium acetobutylicum ATCC 824] gi|325510403|gb|ADZ22039.1| Superfamily II DNA/RNA helicase, SNF2 family [Clostridium acetobutylicum EA 2018] Length = 1052 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 76/208 (36%), Gaps = 27/208 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +G N F S + Q+ + E + K + K+ L Sbjct: 838 KIYRSIEE------KGINNSKFIIFSLLTRLRQICSNPRTVVENYNGK---NAKMDVLMD 888 Query: 62 IIEKA--NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 I+ + N I+V F S L + E+N+GK Sbjct: 889 TIKTSIANRHRILVFSQFTSVLKSIKDKLIEKDIDVMYLDGNTKMKDRFQLADEFNKGKG 948 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL G +I+V F WW+ +E R + G K+ V + Sbjct: 949 EVFLISLKAGGTGLNLT-GADIVVHFDPWWNPA-----VENQASDRAHRIGQKKNVEIIK 1002 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI + TI+E + + + K + D +L Sbjct: 1003 LITRGTIEEKIYKLQQEKKKMVDNVLGD 1030 >gi|118344288|ref|NP_001071967.1| SWI/SNF protein [Ciona intestinalis] gi|70571306|dbj|BAE06719.1| Ci-SWI/SNF [Ciona intestinalis] Length = 1003 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 85/232 (36%), Gaps = 40/232 (17%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------- 42 K Y K QRE Y + ++I+ N+ + ++ + N + Sbjct: 363 KIYTGLSKMQREWYTKILVKDIDIINAAGRTDRVRLLNILMQLRKCCNHPYLFDGAEPGP 422 Query: 43 -DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG-------- 91 V+ K+ L+ ++ + +++ L L+ Sbjct: 423 PYTTSEHLVVNSGKLSVLDKLLPKFQEQGDRVLIFSQMTRILDILEDYCMWRGYNYCRLD 482 Query: 92 --RTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + I E+N + + G G+NL NI++ F W+ + Sbjct: 483 GQTPHEDRQRQINEFNRPGSEKFIFMLSTRAGGLGINLMT-ANIVILFDSDWNPQ----- 536 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI +NT++E +++R K + ++++ + Sbjct: 537 VDMQAMDRAHRIGQKKQVMVFRLITENTVEERIIERAEMKLHLDNIVIQQGR 588 >gi|288559877|ref|YP_003423363.1| helicase SNF2 family [Methanobrevibacter ruminantium M1] gi|288542587|gb|ADC46471.1| helicase SNF2 family [Methanobrevibacter ruminantium M1] Length = 698 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 74/212 (34%), Gaps = 22/212 (10%) Query: 1 MKQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +K Y+ ++ ++ Q N + K K++ Sbjct: 471 IKLYNAVLDGIFEEIDELKGIERRGTILKTITSLKQTCNHPAQFLGSGKPKIKESGKMEL 530 Query: 59 LEVIIEKANAA--PIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 L I+E +++ + L R ++ ++ I + Sbjct: 531 LITILENIMDMDEKVLIFTQYVKMGEIIQDLVSKKLKREVLFLHGSQSRNEKAEIIDRFQ 590 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +L A + G GLNL + ++ + LWW+ +E R + G ++ Sbjct: 591 EDDNYKILIATLKTGGVGLNLTA-ASNVIHYDLWWNPA-----VENQATDRVHRIGQEKD 644 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY I + T++E + ++TK + + ++ Sbjct: 645 VMVYRFITKGTLEEEIDSIIKTKLDLAEKAIS 676 >gi|294933057|ref|XP_002780576.1| Chromatin remodelling complex ATPase chain Iswi, putative [Perkinsus marinus ATCC 50983] gi|239890510|gb|EER12371.1| Chromatin remodelling complex ATPase chain Iswi, putative [Perkinsus marinus ATCC 50983] Length = 1003 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 27/224 (12%), Positives = 74/224 (33%), Gaps = 33/224 (14%) Query: 3 QYHKF-QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------KHWKEVHD 53 Y + + + + ++ + N ++ + Sbjct: 249 LYRDLLMKNTVLSTESLSGHKMRLLNTLMQLRKCCNHPYLFEGMEPGPPYFDGPHLWENS 308 Query: 54 EKIKALEVIIEK------ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKD 97 K++ ++ ++E+ +++ L + + Sbjct: 309 GKLRVVDKLLERLAVPGPQGKNQVLIFTQMTRMLDIMDDYLRLKGYGYCRIDGDTAMSDR 368 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++ + + G G+NL N ++ + ++ + ++ + R Sbjct: 369 QAMIDDFTRPDSDKFVFILSTRAGGLGINL-NTANYVIIYDSDFNPQ-----MDLQAIDR 422 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G KR V VY L+ Q+T++E +++R K I +L++ K Sbjct: 423 AHRIGQKRQVTVYRLVTQDTVEEKIVERAAKKMQIDNLVIQKGK 466 >gi|326381489|ref|ZP_08203183.1| SNF2-like protein [Gordonia neofelifaecis NRRL B-59395] gi|326199736|gb|EGD56916.1| SNF2-like protein [Gordonia neofelifaecis NRRL B-59395] Length = 965 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 64/215 (29%), Gaps = 27/215 (12%) Query: 3 QYHKFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y E D + + Q+ N +Y ++ Sbjct: 730 LYQAVLNELHEALADTGQGGPRRRTVLAALTRLKQICNHPAHYFDDGSGMLRRGRHRSGK 789 Query: 60 EVIIEKA------NAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQ 102 ++ +V F + L G + D+ + Sbjct: 790 VELLVDVLTTLIAEGDRALVFTQFAAFAELLSGWLEPVLGTAVPVLHGGSSRDQRDAMVA 849 Query: 103 EWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ P+L A + G GLN+ N ++ WW+ +E R + G Sbjct: 850 RFSSPDGPPVLIATLKAGGTGLNMVA-ANHVIHADRWWNPA-----VEDQATDRAYRIGQ 903 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V + T++E + + + +K + L L+ Sbjct: 904 TRNVQVRKFVCVGTLEERIDEMVASKRELSRLTLS 938 >gi|300933599|ref|ZP_07148855.1| putative DNA/RNA helicase [Corynebacterium resistens DSM 45100] Length = 1052 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 74/209 (35%), Gaps = 27/209 (12%) Query: 3 QYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWK----EVHDEKIK 57 Y + ++ L+ + + N V+ Q+ N ++ + E K+K Sbjct: 793 LYKAYIDDIEQRLRDRSQDRRGNILGALVRIKQICNHPAHFAGDGSALLKEGEHRSGKVK 852 Query: 58 ALEVIIEKAN--AAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQEW 104 I+E+A ++ F + G K ++++ Sbjct: 853 RAFEILEQAQREGRKALIFTQFPTFGTMLLPELERIFGQPIPMLHGGVPRKKRADMVRQF 912 Query: 105 N---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E P + + G G+ L +++V WW+ +E R + G Sbjct: 913 QLPGEQGPPAMVLSVRAGGTGITLTE-ASVVVHIDRWWNPA-----VEDQATDRAYRIGQ 966 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R V VY L+A+ T+DE + +++K + Sbjct: 967 NRDVTVYKLVAEGTLDERINDIIQSKREL 995 >gi|66361321|pdb|1Z5Z|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE C-Terminal Domain gi|66361322|pdb|1Z5Z|B Chain B, Sulfolobus Solfataricus Swi2SNF2 ATPASE C-Terminal Domain Length = 271 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 69/211 (32%), Gaps = 23/211 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y L+ ++ S +K Q+ + K+ Sbjct: 44 MYKAEVENLFNNIDSVTGIKRKGMILSTLLKLKQIVDHPALLK-GGEQSVRRSGKMIRTM 102 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------------RTLDKDPCTIQEWNE 106 IIE+ I + F ++ + ++D + N Sbjct: 103 EIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNN 162 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL N ++ F WW+ +E R + G R V Sbjct: 163 PSVKFIVLSVKAGGFGINLTS-ANRVIHFDRWWNPA-----VEDQATDRVYRIGQTRNVI 216 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI+ T++E + Q L K ++ ++++ Sbjct: 217 VHKLISVGTLEEKIDQLLAFKRSLFKDIISS 247 >gi|33864422|ref|NP_895982.1| SNF2/helicase domain-containing protein [Prochlorococcus marinus str. MIT 9313] gi|33641202|emb|CAE22332.1| SNF2 related domain:DEAD/DEAH box helicase [Prochlorococcus marinus str. MIT 9313] Length = 1099 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 62/217 (28%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEK----- 55 Y E + + + Q+ N +E+ + ++ Sbjct: 869 LYRNTVDETLEAIARAPRGQRHGKVLGLLTRLKQICNHPALALKEQTVAKGFMDRSAKLL 928 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEW 104 + ++ F L+ + + + + Sbjct: 929 RLEEILEEVIEAGDRALLFTQFAEWGHLLKAYLQQRWRFEVPFLHGSTSKTERQAMVDRF 988 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 E L + G GLNL + + WW+ +E R + G Sbjct: 989 QEDPRGPQLFLLSLKAGGVGLNLTR-ASHVFHVDRWWNPA-----VENQATDRAYRIGQT 1042 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ I +++E + + +R KS + + ++ + + Sbjct: 1043 SRVMVHKFITSGSVEEKIDRMIREKSRLAEDIIGSGE 1079 >gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f. nagariensis] gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f. nagariensis] Length = 1596 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 64/217 (29%), Gaps = 27/217 (12%) Query: 6 KFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWK------EVHDEKIK 57 + R + I + + ++ N + K++ Sbjct: 716 ELYRAYLASTEVGEILEGSRRALCGIDILRKICNHPDLLERVTAQDAEDYGNPARSGKLR 775 Query: 58 ALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN 105 E ++ ++ L G + P I ++N Sbjct: 776 VAERVLTSWHTARQKALLFCQTQQMLDILEKLVAGRGWSYHRMDGGTPVAVRPRLIDDFN 835 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G G+NL G ++ + W+ + R + G + Sbjct: 836 TNPDVFVFLLTTKVGGLGVNLT-GATRVMLYDPDWNPST-----DIQARERAWRIGQSHS 889 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V +Y LI TI+E + R KS + + +L +++ Sbjct: 890 VTIYRLITAGTIEEKIYHRQIYKSFLTNKVLRDPRQK 926 >gi|52840972|ref|YP_094771.1| DNA helicase SNF2/RAD54 family protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296762|ref|YP_123131.1| hypothetical protein lpp0801 [Legionella pneumophila str. Paris] gi|52628083|gb|AAU26824.1| DNA helicase, SNF2/RAD54 family domain protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750547|emb|CAH11949.1| hypothetical protein lpp0801 [Legionella pneumophila str. Paris] Length = 1088 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 17/182 (9%) Query: 33 LQLANGAVYYDEEKHWK-EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA------- 82 Q+ + K+ AL +++ ++V F S L Sbjct: 899 RQVCCDPRLLSMSEAEIAHGTSCKLDALMELLDNLVEEGRRVLVFSQFTSMLKLIEELLI 958 Query: 83 -RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + ++ +G P+ + G GLNL + ++ + WW+ Sbjct: 959 VRQYDYLKLTGQTQNRQALVDQFQQGDTPIFLISLKAGGTGLNLTR-ADTVIHYDPWWNP 1017 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +E R + G + VFVY LI T++E +L K + + +L+ Sbjct: 1018 S-----VEDQATDRTHRIGQESPVFVYKLITSGTVEEAILGMQEKKRQLVEGILSTDASR 1072 Query: 202 TI 203 ++ Sbjct: 1073 SM 1074 >gi|310789538|gb|EFQ25071.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1153 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 65/201 (32%), Gaps = 27/201 (13%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEV-------HDEKIKALEVII--EKANAAPII 72 + ++ N + K + K++ + ++ K + Sbjct: 679 KRQALYGIDILRKICNHPDLVNVRKKGQPGYDWGNPRRSSKLQTVGELLPLWKRFGHKTL 738 Query: 73 VAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWN-EGKIPLLFAHPASCG 120 + L LQ+ + ++ K I +N + I + + G Sbjct: 739 LFSQTKIMLDILQEFIGKMEGMNYLRMDGEVAVEKRQALIDRFNHDPSIHVFLLTTKTGG 798 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL G +V + W+ + R + G + V +Y L+ TI+E + Sbjct: 799 LGVNLT-GATRIVIYDPDWNPST-----DLQARERAWRLGQTKPVAIYRLMTSGTIEEKI 852 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 R K + + +L K+ Sbjct: 853 YHRQIFKQFMTNKVLKDPKQR 873 >gi|213019863|ref|ZP_03335663.1| helicase, SNF2 family [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994547|gb|EEB55195.1| helicase, SNF2 family [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 917 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 74/213 (34%), Gaps = 22/213 (10%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + ++ Q+ N ++ ++K K++ LE Sbjct: 690 LYQEVVNTTMKKIERSEGIERKGLILKLINALKQVCNHPSHFGKKKRASIEQSGKMQMLE 749 Query: 61 VIIEKANA--APIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEW-NE 106 I+ + ++ + + + ++ N Sbjct: 750 EILIGISELAEKSLIFTQYTEMGEIIARLLEEKFESKVPFLHGSLSRKARDKMVNDFENS 809 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L + G GLNL N ++ + LWW+ +E R + G +R V Sbjct: 810 FRSNILIVSLKAGGTGLNLTA-ANHVIHYDLWWNPA-----VEAQATDRAYRIGQERNVM 863 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L++ T +E + + +++K + +L +++ + Sbjct: 864 VYRLLSTGTFEERIDEMIQSKKELANLTISSGE 896 >gi|226312228|ref|YP_002772122.1| hypothetical protein BBR47_26410 [Brevibacillus brevis NBRC 100599] gi|226095176|dbj|BAH43618.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 952 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 68/217 (31%), Gaps = 29/217 (13%) Query: 3 QYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEE--KHWKEVHDEKIKA 58 Y ++++ ++ + + QL + E + K++ Sbjct: 713 LYETAIQDMFDRMEKASPMERRGLILTTLTRLKQLCDHPALILNEIATTDEAGRSHKLER 772 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWN 105 L +++ ++ + +K I + Sbjct: 773 LLELVDDIRQKKERCLIFTQYIQMGNMLQRVLTREGYGPVYFLNGATKKEKRDEMIARFQ 832 Query: 106 EGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +P + + G GLNL N ++ WW+ +E R + Sbjct: 833 DPTLPDDERGAIFILSLRAGGTGLNLTE-ANHVIHVDRWWNPA-----VENQATDRAHRI 886 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G +R V VY I+ TI+E + + + K ++ ++ Sbjct: 887 GQQRDVHVYKFISLGTIEERIDEMMERKLSLSQQIVG 923 >gi|295707193|ref|YP_003600268.1| SNF2 family helicase [Bacillus megaterium DSM 319] gi|294804852|gb|ADF41918.1| SNF2 family helicase [Bacillus megaterium DSM 319] Length = 876 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 28/212 (13%), Positives = 69/212 (32%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + + + + + + K L N Y +E K+ K + Sbjct: 650 LYQELVQGMLQETEEKTGFERKGIILQTLNKLKLLCNHPALYLKESAAKQTVRRSHKSEK 709 Query: 59 LEVII--EKANAAPIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ + ++ + ++ + ++ + ++ Sbjct: 710 IIELVESIRTQQESCLIFTQYIETGLMLQRTLEKEINEPVLFLHGSLSKEQRDEMVAQFQ 769 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL N ++ F WW+ +E R + G + V Sbjct: 770 ARNKAIFILSLRAGGTGLNLTA-ANHVIHFDRWWNPA-----VENQATDRAHRIGQNKFV 823 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + TI+E + + + K + + L+ Sbjct: 824 HVHKFITRGTIEEKIDEVINQKQHLNNELIQG 855 >gi|148697108|gb|EDL29055.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_a [Mus musculus] Length = 1103 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 458 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 517 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 518 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 577 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 578 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 632 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 633 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 684 >gi|149235383|ref|XP_001523570.1| DNA repair and recombination protein RAD26 [Lodderomyces elongisporus NRRL YB-4239] gi|146452979|gb|EDK47235.1| DNA repair and recombination protein RAD26 [Lodderomyces elongisporus NRRL YB-4239] Length = 1159 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 72/229 (31%), Gaps = 35/229 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA------VYYDEEKHWKEVHDEK 55 + Y KF ++ N ++ N + K Sbjct: 617 ELYEKFLDS--EEMDSIVKGKRNVLVGVDTLRKICNHPDLIYREALMHRANYGDPSKSGK 674 Query: 56 IKALEVII--EKANAAPIIVAYHFNSDLARLQKA------------------FPQGRTLD 95 ++ L+ ++ ++ ++ L L+K + Sbjct: 675 MQVLKNLLQLWQSEDHKTLLFCQTRQMLDILEKFVANLHLLGDESKKFNYLRMDGNTPIS 734 Query: 96 KDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + +N + + G G+NL G + ++ + W+ + Sbjct: 735 RRQQLVDTFNNSPDLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DIQARE 788 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G K+ + +Y L+ +I+E + R K+ +Q+ +L K+ + Sbjct: 789 RAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLQNKILKDPKQRRL 837 >gi|54293719|ref|YP_126134.1| hypothetical protein lpl0772 [Legionella pneumophila str. Lens] gi|53753551|emb|CAH15006.1| hypothetical protein lpl0772 [Legionella pneumophila str. Lens] Length = 1088 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 17/182 (9%) Query: 33 LQLANGAVYYDEEKHWK-EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA------- 82 Q+ + K+ AL +++ ++V F S L Sbjct: 899 RQVCCDPRLLSMSEAEIAHGTSCKLDALMELLDNLVEEGRRVLVFSQFTSMLKLIEELLI 958 Query: 83 -RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + ++ +G P+ + G GLNL + ++ + WW+ Sbjct: 959 VRQYDYLKLTGQTQNRQALVDQFQQGDTPIFLISLKAGGTGLNLTR-ADTVIHYDPWWNP 1017 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +E R + G + VFVY LI T++E +L K + + +L+ Sbjct: 1018 S-----VEDQATDRTHRIGQESPVFVYKLITSGTVEEAILGMQEKKRQLVEGILSTDASR 1072 Query: 202 TI 203 ++ Sbjct: 1073 SM 1074 >gi|260818894|ref|XP_002604617.1| hypothetical protein BRAFLDRAFT_126777 [Branchiostoma floridae] gi|229289945|gb|EEN60628.1| hypothetical protein BRAFLDRAFT_126777 [Branchiostoma floridae] Length = 1277 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 23/214 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + + L + Q+ N + + + K+K L Sbjct: 1052 LYESVVQNMVKKLAEAKEKKERTGVIFQTMTFLKQICNHPANFTKNSNRDIQASGKMKVL 1111 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT------------LDKDPCTIQEWN 105 +++ +++ + + + + +D T Sbjct: 1112 IDLLQPILQQGEKVLIFSQYVQMIKLMAQMVEAHFKVKPLIFEGSMSQQKRDEATTAFQT 1171 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + ++ + G GLNL N ++ + LW++ + E R + G + V Sbjct: 1172 QPHRQIMIVSLQAGGVGLNLTA-ANHVIHYDLWFNPAK-----ENQATDRAFRIGQTKTV 1225 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 FVY I++NT +E + L K + DL + A + Sbjct: 1226 FVYRFISENTFEEKINVMLEKKKDLSDLSVQAGE 1259 >gi|46447118|ref|YP_008483.1| hypothetical protein pc1484 [Candidatus Protochlamydia amoebophila UWE25] gi|46400759|emb|CAF24208.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 1256 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 79/213 (37%), Gaps = 20/213 (9%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEV 61 + +R L DL+ + I + + Q+ N V+ +++ K + Sbjct: 1022 EQRKRHLMQDLKDDQTPIPYLHIFALLSSLKQICNHPAVHLKNPGDYQKYSSGKWELFIE 1081 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEGKIP 110 ++ + + +++ + L ++ +G T ++ + ++ Sbjct: 1082 LLREARESQQKVVIFSQYLGMLDIIENYLNDQKIGYASIRGSTQNRKEQLQKFNHDPSCE 1141 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G++L ++++ + WW+ E R + G + V V+ L Sbjct: 1142 VFVGSLQAAGLGIDLTA-ASVVIHYDRWWNAAR-----ENQATDRVHRIGQMKGVQVFKL 1195 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + + T +E + + K + + ++ + T+ Sbjct: 1196 VTKGTFEEKIDAMINRKGQLMEEIIGVDDQNTL 1228 >gi|257126260|ref|YP_003164374.1| non-specific serine/threonine protein kinase [Leptotrichia buccalis C-1013-b] gi|257050199|gb|ACV39383.1| Non-specific serine/threonine protein kinase [Leptotrichia buccalis C-1013-b] Length = 1172 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 76/212 (35%), Gaps = 21/212 (9%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y K + + K Q+ N + E+ + K++ L ++ Sbjct: 956 YIKKAKSEMKKFNENENNRMKILAILTKLRQICNSPTLFKEDYKGEV---AKLEVLRDLL 1012 Query: 64 EK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 N +++ F L + ++N G+ + Sbjct: 1013 PDITENGHRLLIFSQFVGTLKEIEKELVNMGIEYFYIDGSVKSKERVDICNKFNAGERQV 1072 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G GLNL G ++++ + WW++ +E R + G K++V V L+ Sbjct: 1073 VLISLKAGGTGLNL-VGADVVIHYDPWWNIA-----VENQASDRAYRIGQKKSVQVIKLV 1126 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + TI+E +++ K + + LL + E + Sbjct: 1127 TEGTIEEKIIKIQENKRQLSENLLESKDGEKV 1158 >gi|242056785|ref|XP_002457538.1| hypothetical protein SORBIDRAFT_03g009030 [Sorghum bicolor] gi|241929513|gb|EES02658.1| hypothetical protein SORBIDRAFT_03g009030 [Sorghum bicolor] Length = 1208 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 68/215 (31%), Gaps = 30/215 (13%) Query: 11 LYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKAL 59 L +E NS ++ N + E + K+K + Sbjct: 681 YRAFLASSEVEQIFDGNRNSLYGIDVLRKICNHPDLLEREHAAQNPDYGNPERSGKMKVV 740 Query: 60 EVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP----------CTIQEWNE- 106 E ++ K +++ L L+ + I E+N Sbjct: 741 EQVLKVWKDQGHRVLLFTQTQQMLDILENFLTACDYQYRRMDGLTPAKQRMALIDEFNNT 800 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +I + G G NL G N ++ + W+ R + G R V Sbjct: 801 DEIFVFILTTKVGGLGTNLT-GANRIIIYDPDWNPSTDM-----QARERAWRIGQTRDVT 854 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY LI + TI+E V R K + + +L +++ Sbjct: 855 VYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQK 889 >gi|149411093|ref|XP_001509678.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Ornithorhynchus anatinus] Length = 1143 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 499 VKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 558 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 559 PPYTTDTHLVNNSGKMVALDKLLSKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 618 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 619 DGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 673 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT+++ +++R K + +++ + Sbjct: 674 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEDRIVERAEIKLRLDSIVIQQGR 725 >gi|260890109|ref|ZP_05901372.1| hypothetical protein GCWU000323_01271 [Leptotrichia hofstadii F0254] gi|260860132|gb|EEX74632.1| putative SNF2 family N- domain protein [Leptotrichia hofstadii F0254] Length = 988 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 76/210 (36%), Gaps = 17/210 (8%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y K + + K Q+ N + E+ + E ++ L I Sbjct: 772 YIKKAKSEMKKFNENENNRMKILAILTKLRQICNSPTLFKEDYKGEVAKLEVLRDLMPDI 831 Query: 64 EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + N +++ F L + ++N G+ ++ Sbjct: 832 IE-NGHRLLIFSQFVGTLKEIEKELENMGIEYFYIDGSVKSKERVDICNKFNAGERQVVL 890 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G ++++ + WW++ +E R + G K++V V L+ + Sbjct: 891 ISLKAGGTGLNL-VGADVVIHYDPWWNIA-----VENQASDRAYRIGQKKSVQVIKLVTE 944 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETI 203 TI+E +++ +K + + LL E + Sbjct: 945 GTIEEKIIKIQESKRKLSENLLENKDGEKV 974 >gi|241950892|ref|XP_002418168.1| ATP-dependent helicase, putative; SWI/SNF chromatin remodelling complex protein, putative; SWI/SNF complex component, putative; transcription regulatory protein, putative [Candida dubliniensis CD36] gi|223641507|emb|CAX43468.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 1663 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 76/227 (33%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANGAVYYDEEKH--------- 47 K Y + R + + N+ ++ ++ ++ N Y+E +H Sbjct: 1008 KLYQQMLRYNMLYAGDPSNGSVPVTIKNANNQIMQLKKICNHPFVYEEVEHLINPTIDTN 1067 Query: 48 -------------WKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 K + K +V+I + + F G Sbjct: 1068 DQIWRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRDMKYMRLDGGTKA 1127 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1128 DDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 1181 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +N+++E++L+R K I ++ A K Sbjct: 1182 QDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGK 1228 >gi|237844775|ref|XP_002371685.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative [Toxoplasma gondii ME49] gi|211969349|gb|EEB04545.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative [Toxoplasma gondii ME49] Length = 1249 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 77/221 (34%), Gaps = 29/221 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYD--------EEKHWKEVH 52 + Y + LQG + ++ + N +D + Sbjct: 575 QLYKDLLTKNVAALQGAEGAGRTQLLNLAMQLRKACNHPYLFDGYESEHADPFGEHVIEN 634 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K++ + ++ + ++ + L+ + D+ Sbjct: 635 AGKLRFCDRLLRRLIQENRRCLIFTQMTKMIDILEDYCRIRLFKYCRIDGNTSGDERDRQ 694 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N IP+ + G G+NL + ++ + W+ + ++ + R + Sbjct: 695 IEAFNAPGSDIPIFLLSTRAGGLGINL-ATADTVILYDSDWNPQ-----VDLQAMDRVHR 748 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K AV VY L+ ++TI++ +++R K + ++ + Sbjct: 749 IGQKSAVNVYRLVHEHTIEQKIIERAMLKLQLDTAIIQQGR 789 >gi|323451886|gb|EGB07762.1| hypothetical protein AURANDRAFT_37691 [Aureococcus anophagefferens] Length = 615 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 27/189 (14%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVH-------DEKIKALEVIIEK--ANAAPIIVAYHF 77 S ++ + N ++ V K+ L+ ++ K A ++ F Sbjct: 285 SLLMQLRKCCNHPYLFEGADPDPGVTDDALVEASGKLHVLDRLLTKLKAKGHRCVLFSQF 344 Query: 78 NSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNL 125 S L L + IQ +N + + G G+NL Sbjct: 345 TSTLDLLDDVLRYRGYEFSRLDGSTNRVQRTVDIQAFNAPGSGVFLFLMSTRAGGLGVNL 404 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 Q + + F W+ + + + R + G + V VY L+ + T++E ++QR Sbjct: 405 QT-ADTCILFDSDWNPQA-----DAQAMARVHRIGQTKPVHVYRLVTKGTVEERIVQRAE 458 Query: 186 TKSTIQDLL 194 K + ++ Sbjct: 459 KKLYLDSMV 467 >gi|19075591|ref|NP_588091.1| SNF2 family helicase Rhp26 [Schizosaccharomyces pombe 972h-] gi|74698399|sp|Q9UR24|RHP26_SCHPO RecName: Full=DNA repair protein rhp26; AltName: Full=RAD26 homolog gi|5902438|dbj|BAA84456.1| Rhp26 [Schizosaccharomyces pombe] gi|6562902|emb|CAB62827.1| SNF2 family helicase Rhp26 [Schizosaccharomyces pombe] Length = 973 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 64/224 (28%), Gaps = 34/224 (15%) Query: 2 KQYHKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY----------DEEKHWK 49 K Y F + ++ L G+ ++ N + Sbjct: 567 KAYQDFLQGSDMQKILNGK----RQMLYGIDILRKICNHPDLVTREYLLHKEDYNYGDPE 622 Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDP 98 + K+ + + K ++ L ++ Sbjct: 623 KSGKLKVIRALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLPDVHYCRMDGSTSIALRQ 682 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + G G+NL G + ++ F W+ + R Sbjct: 683 DLVDNFNKNEYFDVFLLTTRVGGLGVNLT-GADRVILFDPDWNPST-----DAQARERAW 736 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 737 RLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 780 >gi|296220127|ref|XP_002756186.1| PREDICTED: DNA excision repair protein ERCC-6 [Callithrix jacchus] Length = 1490 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 76/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 K Y F +E+Y L GE S + ++ N + +E Sbjct: 772 KVYQNFIDSKEVYRILNGE----MQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEE 827 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 828 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTT 887 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I +N + I + G G+NL G N +V + W+ + Sbjct: 888 TIASRQPLITRYNEDKSIFVFLLTTRVGGLGVNLT-GANRVVIYDPDWNPST-----DTQ 941 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 942 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 991 >gi|311271511|ref|XP_003133156.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sus scrofa] Length = 1481 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 76/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 K Y F +E+Y L GE S V ++ N + +E Sbjct: 763 KVYQNFIDSKEVYRILNGE----MQIFSGLVALRKICNHPDLFSGGPKNFKGIPGEELEE 818 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 819 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTT 878 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I +N + I + G G+NL G N ++ + W+ + Sbjct: 879 TIASRQPLITRYNEDASIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPST-----DTQ 932 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 933 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 982 >gi|313676698|ref|YP_004054694.1| snf2-related protein [Marivirga tractuosa DSM 4126] gi|312943396|gb|ADR22586.1| SNF2-related protein [Marivirga tractuosa DSM 4126] Length = 976 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 76/207 (36%), Gaps = 20/207 (9%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +K Y F+ + +++ + I + + Q+AN D E E + Sbjct: 760 VKNY--FRDMILDEIEKKGIRSSQMILLQGLTQLRQIANHPKMVDPEYQGDSGKMEDVTH 817 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKI 109 + I +++ F L+ ++ + G T D+ + Sbjct: 818 MLTSIIS-EGHKVLIFSQFVKHLSLFKEFMERSHIKYAYLDGTTKDRQKQVKLFQENQDL 876 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + + WW+ QQ ++R + G K+ VF Y Sbjct: 877 SVFLISLKAGGLGLNLTA-ADYVFLLDPWWNPAIEQQAVDR-----AHRIGQKQQVFTYK 930 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 I +NT++E +L K T+ L++ Sbjct: 931 FITKNTVEEKILALQEKKLTLARDLIS 957 >gi|66361330|pdb|1Z6A|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE DOMAIN Length = 500 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 69/211 (32%), Gaps = 23/211 (10%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y L+ ++ S +K Q+ + K+ Sbjct: 273 MYKAEVENLFNNIDSVTGIKRKGMILSTLLKLKQIVDHPALLK-GGEQSVRRSGKMIRTM 331 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------------RTLDKDPCTIQEWNE 106 IIE+ I + F ++ + ++D + N Sbjct: 332 EIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNN 391 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G G+NL N ++ F WW+ +E R + G R V Sbjct: 392 PSVKFIVLSVKAGGFGINLTS-ANRVIHFDRWWNPA-----VEDQATDRVYRIGQTRNVI 445 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ LI+ T++E + Q L K ++ ++++ Sbjct: 446 VHKLISVGTLEEKIDQLLAFKRSLFKDIISS 476 >gi|322701606|gb|EFY93355.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Metarhizium acridum CQMa 102] Length = 1416 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 81/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 K Y + D +G A ++ ++ +L N +DE ++ Sbjct: 783 KLYKQMVTHNKLVVSDGKGGKTNARGLSNMIMQLRKLCNHPFVFDEVENVMNPMSISNDL 842 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K +++ + + + ++ D+ Sbjct: 843 LWRTAGKFELLDRILPKYQATGHRVLMFFQMTAIMDIMEDYLRYRKFEYLRLDGTTKSDE 902 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 903 RSDLLKEFNAPDSKYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 956 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R R K + ++ A + Sbjct: 957 RAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGR 1001 >gi|296131142|ref|YP_003638392.1| SNF2-related protein [Cellulomonas flavigena DSM 20109] gi|296022957|gb|ADG76193.1| SNF2-related protein [Cellulomonas flavigena DSM 20109] Length = 1096 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 69/213 (32%), Gaps = 21/213 (9%) Query: 2 KQYHK-FQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y QRE L L + +LA A + + V K+ Sbjct: 874 RAYDTHLQRERSRLLGLLDDFDANRLAIFRSLTTLRRLALDASLV-DPDRYASVPSSKLD 932 Query: 58 ALEVII--EKANAAPIIVAYHFNSDLARLQKAF--------PQGRTLDKDPCTIQEWNEG 107 AL + A +V F L + + + + G Sbjct: 933 ALLDQLAPVAAEGHRALVFSQFTGYLRLVADRCRTAGLAYEYLDGRTRRRGDVVDRFRTG 992 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 PL + G GLNL + + WW+ QQ ++R + G R V V Sbjct: 993 SAPLFLVSLRAGGFGLNLTE-ADYVYLLDPWWNPAVEQQAVDR-----THRIGQDRKVMV 1046 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 L+A TI+E V+ K + D +L ++ Sbjct: 1047 NRLVAAGTIEEKVMALAARKRAVFDAVLGDDEQ 1079 >gi|257069450|ref|YP_003155705.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] gi|256560268|gb|ACU86115.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] Length = 1110 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 78/213 (36%), Gaps = 22/213 (10%) Query: 3 QYH---KFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +R+ L +++ +A + + + +V K++ Sbjct: 890 VYDSVLQRERKKVLGLIDTDLDRSRFIVFRSLTLLRMMALDPSLV-DPEAYADVPSSKLE 948 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEG 107 AL +E+ + +++ F S L R + + + + EG Sbjct: 949 ALFDRLEEVIGDGHRVLLFSQFTSYLDQVASELERREVRYAHLDGSTRDRDAAVAGFREG 1008 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GL L + + WW+ E V R + G R V V Sbjct: 1009 DAPVFLISLKAGGFGLTLTE-ADYVFLLDPWWNPAA-----ENQAVDRAHRIGQDRTVMV 1062 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Y +IA++TI+E VL R K+ + D L + + Sbjct: 1063 YRMIAEDTIEEKVLALQRRKAELFDALTDGGEA 1095 >gi|169349519|ref|ZP_02866457.1| hypothetical protein CLOSPI_00240 [Clostridium spiroforme DSM 1552] gi|169293594|gb|EDS75727.1| hypothetical protein CLOSPI_00240 [Clostridium spiroforme DSM 1552] Length = 1064 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 69/203 (33%), Gaps = 21/203 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +L L E I+ F S + QL + + K+KA II+K Sbjct: 850 QINDKLKSALDIEQIDKFQILSMMTRLRQLCCEPRILY---NDIQEPSSKMKACLDIIKK 906 Query: 66 --ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 N +++ F S L K + + + Sbjct: 907 AKENKQKVLLFSSFTSSLEFIEKELRKDDISYYVLTGATNKIKRHQLVNAFQNDNTNVFL 966 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL +I++ + WW++ R + G V VY LI + Sbjct: 967 ISLKAGGTGLNLTA-ASIVIHYDPWWNMSAQ-----NQATDRAYRIGQVNNVQVYKLIMK 1020 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 N+I+E + + K + ++ + Sbjct: 1021 NSIEEKIQKLQEQKQDLSNIFIE 1043 >gi|221480872|gb|EEE19293.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii GT1] gi|221501605|gb|EEE27375.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii VEG] Length = 1200 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 77/221 (34%), Gaps = 29/221 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYD--------EEKHWKEVH 52 + Y + LQG + ++ + N +D + Sbjct: 526 QLYKDLLTKNVAALQGAEGAGRTQLLNLAMQLRKACNHPYLFDGYESEHADPFGEHVIEN 585 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K++ + ++ + ++ + L+ + D+ Sbjct: 586 AGKLRFCDRLLRRLIQENRRCLIFTQMTKMIDILEDYCRIRLFKYCRIDGNTSGDERDRQ 645 Query: 101 IQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N IP+ + G G+NL + ++ + W+ + ++ + R + Sbjct: 646 IEAFNAPGSDIPIFLLSTRAGGLGINL-ATADTVILYDSDWNPQ-----VDLQAMDRVHR 699 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K AV VY L+ ++TI++ +++R K + ++ + Sbjct: 700 IGQKSAVNVYRLVHEHTIEQKIIERAMLKLQLDTAIIQQGR 740 >gi|323530052|ref|YP_004232204.1| SNF2-like protein [Burkholderia sp. CCGE1001] gi|323387054|gb|ADX59144.1| SNF2-related protein [Burkholderia sp. CCGE1001] Length = 1175 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 63/255 (24%) Query: 3 QYH----KFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKE------ 50 Y Q ++ + + + + +K Q+ + Sbjct: 903 LYETVRTAMQEKVRAAVSAQGLARSHIIVLDALLKLRQVCCDPRLVRTLHGAEHSAADSA 962 Query: 51 -----------------------------------VHDEKIKALEVIIEK--ANAAPIIV 73 K+ L ++ + +++ Sbjct: 963 GEGADVSAGEAVKTHENSSDAPLRSSDKAERGARTTRSAKLDLLLSMLPELIEEGRRVLL 1022 Query: 74 AYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 F LA + +A + ++ + GK+PL + G GLNL Sbjct: 1023 FSQFTGMLALIAEALDEAAIPYVILTGDTADRITPVERFQHGKVPLFLISLKAGGVGLNL 1082 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + WW+ E R + G + VFVY LIA +I+E +++ Sbjct: 1083 TA-ADTVIHYDPWWNPAA-----ENQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQE 1136 Query: 186 TKSTIQDLLLNALKK 200 K+ + D +L+ Sbjct: 1137 QKAGLADSILSEDAA 1151 >gi|302308944|ref|NP_986109.2| AFR562Cp [Ashbya gossypii ATCC 10895] gi|299790868|gb|AAS53933.2| AFR562Cp [Ashbya gossypii ATCC 10895] Length = 1445 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 76/227 (33%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVHD--- 53 K Y + + + + ++ ++ ++ N ++E + + Sbjct: 816 KLYEQMLKHRRLFVVDDPSSKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPNRETN 875 Query: 54 -------EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD--------- 95 K + LE I+ K + +++ + + ++ Sbjct: 876 ANIWRVAGKFELLEKILPKFKASGHRVLIFFQMTQIMDIMEDFLRFCDMKYLRLDGHTKS 935 Query: 96 -KDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++N + G GLNLQ + ++ F W+ + + Sbjct: 936 DDRTALLNKFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 989 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E++L+R K I ++ A K Sbjct: 990 QDRAHRIGQKNEVRILRLITDNSVEEVILERAHRKLDIDGKVIQAGK 1036 >gi|182416600|ref|ZP_02948017.1| SWF/SNF family helicase [Clostridium butyricum 5521] gi|237669036|ref|ZP_04529020.1| Non-specific serine/threonine protein kinase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379558|gb|EDT77042.1| SWF/SNF family helicase [Clostridium butyricum 5521] gi|237657384|gb|EEP54940.1| Non-specific serine/threonine protein kinase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 1077 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 74/211 (35%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELY---CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y ++ + L + S K Q+ + + KI A Sbjct: 855 ETYAEYAKNLIQKKVESDEFKKSKIEILSYVTKLRQICLDPSVIMDNYNGT---SGKIDA 911 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNE 106 L ++E+ ++V F S L T + + E+N+ Sbjct: 912 LIELLEQSIEGDHKVLVFSQFTSVLKNISTILKENNMSYCYLDGSMTSSERMKMVNEFND 971 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + + G GLNL +I++ F WW+ +E R + G K V Sbjct: 972 GNKNIFLISLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQATDRAHRLGQKNVVE 1025 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIA TI+E ++ +K + D +L+ Sbjct: 1026 VIKLIASGTIEEKIIDLQNSKRELIDKVLSD 1056 >gi|66359998|ref|XP_627177.1| SNF2L ortholog with a SWI/SNF2 like ATpase and a Myb domain [Cryptosporidium parvum Iowa II] gi|46228591|gb|EAK89461.1| SNF2L ortholog with a SWI/SNF2 like ATpase and a Myb domain [Cryptosporidium parvum Iowa II] Length = 1308 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 72/217 (33%), Gaps = 28/217 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVHD 53 K Y + L + + ++ + N +D E Sbjct: 455 KIYSELLTRNLDVLNSASSNKTQMLNLLMQLRKTCNHPYLFDGVEPGPPYVEGFHMVEAS 514 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTI 101 K+ L ++ K + + +++ L + + I Sbjct: 515 GKMVLLHKLLPKLFSQGSRVLLFSQMTRLLDIIDDYLRWCGYPYCRIDGSTPGIERQERI 574 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N+ + + G G+NL ++++ F ++ + ++ + R + Sbjct: 575 DIFNKEGSEKLIFLLSTRAGGIGINL-ATADVVILFDSDFNPQ-----MDLQAMDRAHRI 628 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ V VY + + T++E +++R K + L++ Sbjct: 629 GQKKPVTVYRFVTEKTVEERIVERAAKKLKLDSLIIQ 665 >gi|229489289|ref|ZP_04383153.1| SNF2 family helicase [Rhodococcus erythropolis SK121] gi|229323782|gb|EEN89539.1| SNF2 family helicase [Rhodococcus erythropolis SK121] Length = 1060 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 72/209 (34%), Gaps = 22/209 (10%) Query: 3 QYH---KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + +R+ L + + F QL+ DEE V K+ A Sbjct: 842 IYDTHLQRERQKILGLLDDVDKNRFTILQSLTLLRQLSLDVSLVDEESG--PVPSAKVDA 899 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 L ++ ++ F L + ++E+ G Sbjct: 900 LVEQLDDVIAGGHRALIFSQFTGFLGSVRNRLDEERIPYSYLDGSTRNRGEVLEEFKSGA 959 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +P+ + G GLNL + WW+ E V R + G R V VY Sbjct: 960 VPVFLISLKAGGFGLNLTE-ADYCFILDPWWNPAA-----EAQAVDRTHRIGQTRNVMVY 1013 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIA++TI+E V+ KS + +++A Sbjct: 1014 RLIAKDTIEEKVMALKAKKSALFSNVMDA 1042 >gi|124487019|ref|NP_001074690.1| DNA excision repair protein ERCC-6 [Mus musculus] gi|189442813|gb|AAI67234.1| Excision repair cross-complementing rodent repair deficiency, complementation group 6 [synthetic construct] Length = 1481 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 78/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------DEEKH 47 K Y F + +Y L GEN S V ++ N + DE + Sbjct: 770 KVYQNFIDSKAVYRILNGEN----QIFSGLVALRKICNHPDLFSGGPKNASGPPEDELEE 825 Query: 48 WKEVH---DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 + H K+ +E ++ +++ L L+ Sbjct: 826 EQFGHWRRSGKMIVVESLLKIWHRQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTT 885 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I ++N + I + G G+NL G N ++ + W+ + Sbjct: 886 TIASRQPLITKYNEDTSIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPST-----DTQ 939 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 940 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 989 >gi|68466749|ref|XP_722570.1| hypothetical protein CaO19.1526 [Candida albicans SC5314] gi|46444555|gb|EAL03829.1| hypothetical protein CaO19.1526 [Candida albicans SC5314] gi|74099650|gb|AAZ99066.1| Swi/Snf core member protein [Candida albicans] Length = 1690 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 78/227 (34%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 K Y + R + N+ ++ ++ ++ N Y+E ++ + Sbjct: 1035 KLYQQMLRYNMLYAGDPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETN 1094 Query: 53 ------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA----------RLQKAFPQGRTL 94 K + L+ ++ K +++ + + G Sbjct: 1095 DQIWRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKA 1154 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1155 DDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 1208 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +N+++E++L+R K I ++ A K Sbjct: 1209 QDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGK 1255 >gi|238882009|gb|EEQ45647.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida albicans WO-1] Length = 1680 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 78/227 (34%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 K Y + R + N+ ++ ++ ++ N Y+E ++ + Sbjct: 1027 KLYQQMLRYNMLYAGDPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETN 1086 Query: 53 ------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA----------RLQKAFPQGRTL 94 K + L+ ++ K +++ + + G Sbjct: 1087 DQIWRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKA 1146 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1147 DDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 1200 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +N+++E++L+R K I ++ A K Sbjct: 1201 QDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGK 1247 >gi|220679201|emb|CAX12774.1| novel protein similar to H.sapiens ERCC6, excision repair cross-complementing rodent repair deficiency, complementation group 6 (ERCC6) [Danio rerio] Length = 559 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 75/231 (32%), Gaps = 41/231 (17%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY----------------D 43 + Y F +E+Y L G+ S + ++ N + + Sbjct: 309 QVYQTFLDSKEVYQILNGD----MQVFSGLIALRKICNHPDLFTGGPRLLRGIPHDQLTE 364 Query: 44 EEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQG 91 EE K+ +E ++ +++ L L+ Sbjct: 365 EEHFGYWKRSGKMIVVESLLRLWHKQGHRVLLFTQSRQMLEILEVFVKENGFSYLKMDGT 424 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T+ I ++N I + G G+NL G N +V + W+ + Sbjct: 425 TTIASRQPLIAQFNQNKDIFVFILTTRVGGLGVNLT-GANRVVIYDPDWNPST-----DT 478 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 479 QARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 529 >gi|148360611|ref|YP_001251818.1| SNF2/RAD54 family transporter domain-containing protein [Legionella pneumophila str. Corby] gi|148282384|gb|ABQ56472.1| DNA helicase, SNF2/RAD54 family domain protein [Legionella pneumophila str. Corby] Length = 1088 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 64/182 (35%), Gaps = 17/182 (9%) Query: 33 LQLANGAVYYDEEKHWK-EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA------- 82 Q+ + K+ AL +++ ++V F S L Sbjct: 899 RQVCCDPRLLSMSEAEIAHGTSCKLDALMELLDNLVEEGRRVLVFSQFTSMLKLIEELLI 958 Query: 83 -RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R ++++ +G P+ + G GLNL + ++ + WW+ Sbjct: 959 ARQYDYLKLTGQTQNRQALVEQFQQGDTPIFLISLKAGGTGLNLTR-ADTVIHYDPWWNP 1017 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +E R + G + VFVY LI T++E +L K + + +L+ Sbjct: 1018 S-----VEDQATDRTHRIGQESPVFVYKLITSGTVEEAILGMQEKKRQLVEGILSTDASR 1072 Query: 202 TI 203 ++ Sbjct: 1073 SM 1074 >gi|307609532|emb|CBW99030.1| hypothetical protein LPW_08151 [Legionella pneumophila 130b] Length = 1088 Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 64/182 (35%), Gaps = 17/182 (9%) Query: 33 LQLANGAVYYDEEKHWK-EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA------- 82 Q+ + K+ AL +++ ++V F S L Sbjct: 899 RQVCCDPRLLSMSEAEIAHGTSCKLDALMELLDNLVEEGRRVLVFSQFTSMLKLIEELLI 958 Query: 83 -RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R ++++ +G P+ + G GLNL + ++ + WW+ Sbjct: 959 ARQYDYLKLTGQTQNRQALVEQFQQGDTPIFLISLKAGGTGLNLTR-ADTVIHYDPWWNP 1017 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +E R + G + VFVY LI T++E +L K + + +L+ Sbjct: 1018 S-----VEDQATDRTHRIGQESPVFVYKLITSGTVEEAILGMQEKKRQLVEGILSTDASR 1072 Query: 202 TI 203 ++ Sbjct: 1073 SM 1074 >gi|296106323|ref|YP_003618023.1| DNA helicase, SNF2/RAD54 family domain protein [Legionella pneumophila 2300/99 Alcoy] gi|295648224|gb|ADG24071.1| DNA helicase, SNF2/RAD54 family domain protein [Legionella pneumophila 2300/99 Alcoy] Length = 1088 Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 64/182 (35%), Gaps = 17/182 (9%) Query: 33 LQLANGAVYYDEEKHWK-EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA------- 82 Q+ + K+ AL +++ ++V F S L Sbjct: 899 RQVCCDPRLLSMSEAEIAHGTSCKLDALMELLDNLVEEGRRVLVFSQFTSMLKLIEELLI 958 Query: 83 -RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R ++++ +G P+ + G GLNL + ++ + WW+ Sbjct: 959 ARQYDYLKLTGQTQNRQALVEQFQQGDTPIFLISLKAGGTGLNLTR-ADTVIHYDPWWNP 1017 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +E R + G + VFVY LI T++E +L K + + +L+ Sbjct: 1018 S-----VEDQATDRTHRIGQESPVFVYKLITSGTVEEAILGMQEKKRQLVEGILSTDASR 1072 Query: 202 TI 203 ++ Sbjct: 1073 SM 1074 >gi|262050608|ref|NP_444353.3| probable global transcription activator SNF2L1 [Mus musculus] gi|81911462|sp|Q6PGB8|SMCA1_MOUSE RecName: Full=Probable global transcription activator SNF2L1; AltName: Full=ATP-dependent helicase SMARCA1; AltName: Full=DNA-dependent ATPase SNF2L; AltName: Full=Nucleosome-remodeling factor subunit SNF2L; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 gi|34783716|gb|AAH57115.1| Smarca1 protein [Mus musculus] gi|123123060|emb|CAM19308.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Mus musculus] Length = 1046 Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 417 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 476 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 477 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 536 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 537 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 592 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 643 >gi|296120640|ref|YP_003628418.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] gi|296012980|gb|ADG66219.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] Length = 674 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 23/205 (11%) Query: 4 YHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y ++E L G++I + ++ Q+ N E + ++++A Sbjct: 446 YDTAEKEGVIQLNEMGDSISIQHVFELVLRLKQITNWDPLTGESAKF-----DRLEADME 500 Query: 62 IIEKANAAPIIVAYHFNSDLA-------RLQKAFPQGRTLDK-DPCTIQEWNEGKIP-LL 112 + A+ I+ + L R G +K ++++ E ++ Sbjct: 501 EV-AASGGKAILFSQWTKTLDFLKEKLERFGPLVYHGGIPNKLREPVLKQFKEDPTKHII 559 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A+ GLNLQ+ + + WW+ IE + R + G K V V I+ Sbjct: 560 LMSYATGAVGLNLQF-AGYVFLYDRWWNPA-----IEDQAINRAHRIGCKSQVIVTRFIS 613 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 ++TI+E + + L K + +L Sbjct: 614 KDTIEEKIDRVLTEKRELFRAILGD 638 >gi|331238296|ref|XP_003331803.1| chromodomain helicase hrp1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309310793|gb|EFP87384.1| chromodomain helicase hrp1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1611 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 79/226 (34%), Gaps = 31/226 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------VHD 53 Y Y L + + + ++ + +N + + + V+ Sbjct: 594 YKAILTRNYAALASSD-SQVSLLNIAMELKKASNHPFLFPGAEPMTDSKEAALRGVVVNS 652 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K+ L+ ++ KA +++ L + ++ I Sbjct: 653 GKMILLDKLLTRLKAEGHRVLIFSQMVRMLDIMSDYMSYRGYIFQRLDGTVPSEERRKAI 712 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N P + G G+NL + ++ F W+ + + + R + Sbjct: 713 GHFNAPGSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDWNPQN-----DLQAMARAHRI 766 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G K V VY L+ ++T++E VL+R + K ++ ++N + HV Sbjct: 767 GQKNHVNVYRLVTKDTVEEDVLERAKRKMILEYAIINQMDTSGKHV 812 >gi|300797826|ref|NP_001178272.1| DNA excision repair protein ERCC-6 [Bos taurus] Length = 1481 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 74/230 (32%), Gaps = 40/230 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD---------------E 44 K Y F +E+Y L GE S V ++ N + E Sbjct: 764 KVYQNFIDSKEVYRILNGE----MQIFSGLVALRKICNHPDLFSGGPKNLKGIPDEELGE 819 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 820 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTT 879 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I +N + I + G G+NL G N ++ + W+ + Sbjct: 880 AIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPST-----DTQ 933 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 934 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 983 >gi|50289791|ref|XP_447327.1| hypothetical protein [Candida glabrata CBS 138] gi|49526637|emb|CAG60264.1| unnamed protein product [Candida glabrata] Length = 1071 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 35/225 (15%) Query: 6 KFQRELYCDLQGENIE------AFNSASKTVKCLQLANGAVYYDEE------KHWKEVHD 53 +FQR Y + + + ++ N D + + Sbjct: 589 EFQRRKYLEFLSSDELSQIKGGKRHVLYGIDILRKICNHPDLLDRDYIKNTSGYGDPKRS 648 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------------- 96 K++ ++ ++ K+ ++ L L++ Sbjct: 649 GKMQVVKQLLKLWKSEGHKTLLFTQSRQMLDILEEFIKFKEPELSDIRYLRMDGTTSIQV 708 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL G N ++ + W+ + R Sbjct: 709 RQTLVDRFNNESYDVFLLTTRVGGLGVNLT-GANRIIIYDPDWNPST-----DLQARERA 762 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V +Y L+ TI+E + R K + + +L+ K++ Sbjct: 763 WRIGQKREVSIYRLMISGTIEEKIYHRQIFKQFLMNKVLSDPKQK 807 >gi|168705379|ref|ZP_02737656.1| swi/snf family helicase_2 [Gemmata obscuriglobus UQM 2246] Length = 612 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 23/204 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + + + L G+ I + ++ Q+ N E ++ + + E Sbjct: 390 AYVRAENDGVIQLNALGDTITVQHVFQLVMRLKQICNFDPLTGESAKLVQLLSDMEEVAE 449 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWN-EGKIPL 111 + I+ + L L K + + + + + + Sbjct: 450 ------SGRKAIIFSQWVEPLEVLAKALAKYGPLQYHGKIPQPQRTPILDRFKSDPSAHV 503 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + GLNLQ+ N + F WW+ IE + R + G K V V + Sbjct: 504 LLMSYGTGSVGLNLQFT-NYVFLFDRWWNPA-----IEDQAINRAHRLGQKHPVTVTRFL 557 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 + TI+ + L K + + L+ Sbjct: 558 SGGTIEGRIADILDAKRKVFNDLI 581 >gi|309774808|ref|ZP_07669829.1| Snf2 family protein [Erysipelotrichaceae bacterium 3_1_53] gi|308917366|gb|EFP63085.1| Snf2 family protein [Erysipelotrichaceae bacterium 3_1_53] Length = 520 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 63/193 (32%), Gaps = 21/193 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIV 73 +G S + QL E + KI A I + + +++ Sbjct: 319 KGFENSKIMILSMLTRLRQLCCDPRLLYENYNGVG---AKISACMEFIENCRESGKKVLL 375 Query: 74 AYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 F S L + + +N P+ + G GL Sbjct: 376 FSQFTSLLSLLEKELVRQDIPYYLLKGSTPKLQRQQLVNSFNSDDTPVFLISLKAGGTGL 435 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL +++ F WW++ R + G V V LIA++TI+E ++Q Sbjct: 436 NLTS-AEVVIHFDPWWNVSAQ-----NQATDRAYRIGQHNNVQVVKLIAKDTIEEKIMQL 489 Query: 184 LRTKSTIQDLLLN 196 K + D +++ Sbjct: 490 QSLKQDLSDSIIH 502 >gi|123123059|emb|CAM19307.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Mus musculus] Length = 1062 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 417 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 476 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 477 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 536 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 537 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 592 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 643 >gi|308511103|ref|XP_003117734.1| hypothetical protein CRE_00333 [Caenorhabditis remanei] gi|308238380|gb|EFO82332.1| hypothetical protein CRE_00333 [Caenorhabditis remanei] Length = 3156 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 37/226 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTV-KCLQLANGAVYYDEEKHWKEVH--------- 52 Y Q+ L L G+ S T+ +L N ++ + + Sbjct: 1820 LYKHMQKGLL--LDGKTNTGSRSLMNTMVHLRKLCNHPFLFNNVEDSCKSFWNSKFITAT 1877 Query: 53 -----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD---------- 95 K++ L+ I+ K A +++ + + + ++ G Sbjct: 1878 DLYRVSGKLELLDRILPKLRATGHRVLMFFQMTAMMTVVEDYLAGGTINYLRLDGSTKPD 1937 Query: 96 KDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + ++N + G GLNLQ + ++ F W+ + Sbjct: 1938 ERGALLDKFNAPNSKYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQ 1991 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V V+ LI N+++E +L R K + + ++ A K Sbjct: 1992 DRAHRIGQKAEVRVFRLITSNSVEEKILASARFKLNVDEKVIQAGK 2037 >gi|322710752|gb|EFZ02326.1| DNA repair protein Rhp26/Rad26, putative [Metarhizium anisopliae ARSEF 23] Length = 1162 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 74/226 (32%), Gaps = 39/226 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDE-------EKHWK 49 K Y F L + + A S ++ N D+ Sbjct: 672 KAYETF-------LGSDEVSAILNRRRQSLYGIDILRKICNHPDLLDKSLGSKTGYNFGS 724 Query: 50 EVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 K++ + +++K N ++ L ++K + +D+ Sbjct: 725 PKLSAKLELTKDLLQKVMIPNGHKTLLFSQGKLMLNIIEKCMRECNISYLRLDGETPVDQ 784 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N + I + + G G NL G + ++ F W+ + R Sbjct: 785 RQPMIDRFNTDLSIHVFLMTTRTGGLGTNLT-GADRIIIFDPDWNPST-----DLQARER 838 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V +Y L+ + TI+E + R K + + +L K+ Sbjct: 839 AWRLGQNKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQR 884 >gi|29840673|ref|NP_829779.1| SNF2 family helicase [Chlamydophila caviae GPIC] gi|29835023|gb|AAP05657.1| helicase, Snf2 family [Chlamydophila caviae GPIC] Length = 1166 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 75/203 (36%), Gaps = 20/203 (9%) Query: 8 QREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 ++EL +G + + + + Q+ + + + K L ++ Sbjct: 952 KKELSRLVKQEGFDRIHIHVLATLTRLKQICCHPAIFA-KDVPEPGDSAKYDLLMDLLSS 1010 Query: 66 A--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 ++ + L+ + + + G T ++ Q + + + Sbjct: 1011 LVETGHKTVLFSQYTKMLSIIKKDLEARGVRFVYLDGSTKNRLELVNQFNEDPGLLVFLI 1070 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + +WW+ +E R + G R+V Y L+ N Sbjct: 1071 SLKAGGTGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQNRSVSSYKLVTLN 1124 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 TI+E +L K ++ ++N+ Sbjct: 1125 TIEEKILSLQNRKKSLVKKVINS 1147 >gi|26326731|dbj|BAC27109.1| unnamed protein product [Mus musculus] Length = 1046 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + + + N + Sbjct: 417 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMHLRKCCNHPYLFDGAEPG 476 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 477 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 536 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 537 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 592 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 643 >gi|255076739|ref|XP_002502040.1| predicted protein [Micromonas sp. RCC299] gi|226517305|gb|ACO63298.1| predicted protein [Micromonas sp. RCC299] Length = 1481 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 63/207 (30%), Gaps = 25/207 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKALEVII--EK 65 D++ + ++ N + K+ E ++ + Sbjct: 901 DVEEILEGRREALGGIDVLRKIVNHPDLLERTTQAHSEKYGEAERSGKLLVTEKVLGLWR 960 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC----------TIQEWN-EGKIPLLFA 114 ++ L L+ A + + I E+N + + + Sbjct: 961 EQGHRCLLFSQTQQMLDILEAAIARAGYTYRRMDGTTPVSHRMRLIDEFNGDDDVFVFLL 1020 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G G+NL G + ++ + W+ + R + G + V VY LI Sbjct: 1021 TTKVGGLGVNLT-GADRVLLYDPDWNPST-----DAQARERAWRIGQTKEVTVYRLITAG 1074 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 TI+E V R K + +L K+ Sbjct: 1075 TIEEKVYHRQIYKEFLTSKVLKDPKQR 1101 >gi|116283949|gb|AAH16071.1| Smarca1 protein [Mus musculus] Length = 1032 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 417 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 476 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 477 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 536 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 537 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 592 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 643 >gi|257064055|ref|YP_003143727.1| DNA/RNA helicase, superfamily II, SNF2 family [Slackia heliotrinireducens DSM 20476] gi|256791708|gb|ACV22378.1| DNA/RNA helicase, superfamily II, SNF2 family [Slackia heliotrinireducens DSM 20476] Length = 907 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 78/213 (36%), Gaps = 21/213 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + YH ++ L L ++E ++ + Q+ E+ K+ A+ Sbjct: 691 RLYHAREQRLQSKLAERDMEDIQLLAEITRLRQVCCDPGLVYEDYD---GGSGKLDAIVN 747 Query: 62 IIEKAN--AAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKI 109 ++E+A + ++ + S L + +N+ + Sbjct: 748 LVEQAREVGSKTVIFSQWVSFLESISKRLNRNGIAHDWIIGDTPASDRVGIVDAFNKDET 807 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+L + G GLN+ ++ W + + +R + G +VFVY Sbjct: 808 PVLLVSMRAGGVGLNMTGASTAIIADPFWHEAAQT------QAYSRLWRLGQDSSVFVYQ 861 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +IA+NTI++ +L K + + +++A Sbjct: 862 IIAENTIEDRILGLQHKKHDLGESVISAGAASM 894 >gi|221055808|ref|XP_002259042.1| snf2 family n-terminal domain [Plasmodium knowlesi strain H] gi|193809113|emb|CAQ39815.1| snf2 family n-terminal domain, putative [Plasmodium knowlesi strain H] Length = 1382 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 75/216 (34%), Gaps = 27/216 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DE 54 K Y + + + ++ + N +D + + Sbjct: 547 KLYSDILSKNIDVINAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLIETSG 606 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ K + +++ L + D+ I Sbjct: 607 KMSLLDKLLPRLKKENSRVLLFSQMTRVLDIIDDYCRWKKYEYLRIDGSTVGDERQIRIN 666 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++NE + + G G+NL +I++ F ++ + ++ + R + G Sbjct: 667 QFNEPNSKYFIFLLSTRAGGIGINLTT-ADIVILFDSDYNPQ-----MDIQAMDRAHRIG 720 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K+ V VY + QNT++E +++R K + L++ Sbjct: 721 QKKKVIVYRFVTQNTVEEKIVERAAKKLKLDSLIIQ 756 >gi|58267652|ref|XP_570982.1| helicase [Cryptococcus neoformans var. neoformans JEC21] gi|57227216|gb|AAW43675.1| helicase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1848 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 77/244 (31%), Gaps = 56/244 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAF-------NSASKTVKCLQLANGAVYYDEEKHWKEV--- 51 + Y +F R + G IE + +L N + + + Sbjct: 1543 QLYEEFSRSKAAEEAGMEIETSASKEGQGHVFQSLQYLRKLCNHPALVLDGEPQRFKEIQ 1602 Query: 52 -------------HDEKIKALEVIIEKAN-------------AAPIIVAYHF-------- 77 H K++AL+ +++ +++ Sbjct: 1603 KKIGGGPELHDLSHAPKMEALKQLLQDCGIGLPVDKLADDVTTHRVLIFCQLRPMLDIIE 1662 Query: 78 -----NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 K +Q +N + +I +L + G GLNL G + Sbjct: 1663 KDLFGTHMPTVSYMRLDGSTDPRKRHAIVQTFNADPRIDVLLLTTSVGGLGLNLT-GADT 1721 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F W+ M + + R + G ++ V VY LI + T++E ++ R K I Sbjct: 1722 VIFVDHDWNP-----MKDLQAMDRAHRLGQRKVVNVYRLITRGTLEEKIMGLQRFKLNIA 1776 Query: 192 DLLL 195 ++ Sbjct: 1777 SSVV 1780 >gi|134112447|ref|XP_775199.1| hypothetical protein CNBE4720 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257851|gb|EAL20552.1| hypothetical protein CNBE4720 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1848 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 77/244 (31%), Gaps = 56/244 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAF-------NSASKTVKCLQLANGAVYYDEEKHWKEV--- 51 + Y +F R + G IE + +L N + + + Sbjct: 1543 QLYEEFSRSKAAEEAGMEIETSASKEGQGHVFQSLQYLRKLCNHPALVLDGEPQRFKEIQ 1602 Query: 52 -------------HDEKIKALEVIIEKAN-------------AAPIIVAYHF-------- 77 H K++AL+ +++ +++ Sbjct: 1603 KKIGGGPELHDLSHAPKMEALKQLLQDCGIGLPVDKLADDVTTHRVLIFCQLRPMLDIIE 1662 Query: 78 -----NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 K +Q +N + +I +L + G GLNL G + Sbjct: 1663 KDLFGTHMPTVSYMRLDGSTDPRKRHAIVQTFNADPRIDVLLLTTSVGGLGLNLT-GADT 1721 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F W+ M + + R + G ++ V VY LI + T++E ++ R K I Sbjct: 1722 VIFVDHDWNP-----MKDLQAMDRAHRLGQRKVVNVYRLITRGTLEEKIMGLQRFKLNIA 1776 Query: 192 DLLL 195 ++ Sbjct: 1777 SSVV 1780 >gi|283458684|ref|YP_003363319.1| superfamily II DNA/RNA helicase [Rothia mucilaginosa DY-18] gi|283134734|dbj|BAI65499.1| superfamily II DNA/RNA helicase [Rothia mucilaginosa DY-18] Length = 1388 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 21/212 (9%) Query: 2 KQYH---KFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + +R+ L+ + F +LA A + + + V K Sbjct: 1163 RIYDTHLQRERQKVLGLLEDMDKNRFTIFQSLTLLRRLALDAAL-IDPEAYAGVSSVKRD 1221 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEG 107 L + ++V F L + + I+ + G Sbjct: 1222 YLVQQLPDLLEKGHRVLVFSQFTGYLKSISARLAKEGIGHLYLDGSTRNRAEVIEAFTSG 1281 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GLNL + + WW+ QQ ++RI + G + V V Sbjct: 1282 QEPVFLISLKAGGFGLNLTE-ADHVFIMDPWWNPAAEQQAVDRI-----HRIGQDKEVHV 1335 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y L+A+ TI+E V+Q +K+ + D ++ + Sbjct: 1336 YRLVAEGTIEEKVMQLKESKAALFDAVVGEGE 1367 >gi|255072403|ref|XP_002499876.1| SNF2 super family [Micromonas sp. RCC299] gi|226515138|gb|ACO61134.1| SNF2 super family [Micromonas sp. RCC299] Length = 2637 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 28/190 (14%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEV--------HDEKIKALEVIIE--KANAAPIIVAYH 76 S ++ + N + ++ K+ L+ I++ K +++ Sbjct: 794 SLLMQLRKCCNHPYLFAGTDVPEDGVPVEELVEASGKLAVLDRILKRLKDQGHRVVLFSQ 853 Query: 77 FNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLN 124 F S L L + I +N P+ + G G+N Sbjct: 854 FTSMLDILSDFLTLRGYQFARLDGSTNRVQRSIDIAAFNRPNSPMFAFLLSTRAGGLGVN 913 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ + V + W+ + ++ + R + G K+ V VY L+ T++E + QR Sbjct: 914 LQT-ADTCVLYDSDWNPQ-----VDTQAMARVHRIGQKKPVHVYRLVTAGTVEERMQQRA 967 Query: 185 RTKSTIQDLL 194 K ++ ++ Sbjct: 968 EKKLFLEQMV 977 >gi|260827184|ref|XP_002608545.1| hypothetical protein BRAFLDRAFT_128832 [Branchiostoma floridae] gi|229293896|gb|EEN64555.1| hypothetical protein BRAFLDRAFT_128832 [Branchiostoma floridae] Length = 1220 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 30/222 (13%) Query: 2 KQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEE----------KHWKE 50 K ++RE+ ++ N + ++ ++ N + Sbjct: 904 KVAEAYKREVVESSAPKSSLLNLNLKNIMMQLRKICNHPYLVEYPLDPATQDYLVDERLV 963 Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDP 98 K+ L+ ++ ++V + Sbjct: 964 ESSGKLLLLDKMLPMLHKQGHKVLVFSQMTKMMDVLEDYCLYRGHKYCRLDGTMAYPDRQ 1023 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + + + G G+NL + ++ + W+ + + R Sbjct: 1024 EQIDTFNKDPDYFVFLLSTRAGGLGINLTA-ADTVIIYDSDWNPQ-----CDLQAQDRCH 1077 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V VY LI NTID+ +++R K ++ ++++ K Sbjct: 1078 RIGQTRPVVVYRLITANTIDQKIVERAAGKRKLEKMVMHKGK 1119 >gi|189190262|ref|XP_001931470.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973076|gb|EDU40575.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1273 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 72/225 (32%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSAS-KTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + S ++ +L N ++E + Sbjct: 693 KLYKQLVTHNRLMVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEEVEDVMNPTKGTNDL 752 Query: 55 ------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K +++ + + ++ + Sbjct: 753 LWRAAGKFELLDRILPKFQATGHRVLMFFQMTQIMNIMEDYLRLRGMMYLRLDGATKADD 812 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N P + G GLNLQ + ++ + W+ + + Sbjct: 813 RSDLLRLFNAPDSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 866 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R K + ++ A K Sbjct: 867 RAHRIGQKNEVRILRLITSNSVEEKILERANYKLDMDGKVIQAGK 911 >gi|156082073|ref|XP_001608529.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148801100|gb|EDL42505.1| hypothetical protein, conserved [Plasmodium vivax] Length = 3241 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 78/222 (35%), Gaps = 27/222 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEVH------D 53 ++ Y + Y L + A NS ++ ++ N E E Sbjct: 1634 IEFYKNILTKNYEQLAKASGGAKNSLQNICMELKKVCNHPFLCCEPVDKDEYKERLVYSS 1693 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDK---------DPCTI 101 KI LE ++ K +++ L + +G + + Sbjct: 1694 GKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRGFKHQRLDGTMSKEMRKKAM 1753 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G G+NL + ++ + W+ + + R + Sbjct: 1754 NHFNSKNSDDFVFLLSTKAGGLGINLTS-ADTVIIYDSDWNPQN-----DLQAGARAHRI 1807 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V +Y L+ +++I++ +L+R + K + L++ L K+ Sbjct: 1808 GQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKK 1849 >gi|78222214|ref|YP_383961.1| SNF2-related:helicase-like:Zinc finger, SWIM-type [Geobacter metallireducens GS-15] gi|78193469|gb|ABB31236.1| SNF2-related:Helicase-like:Zinc finger, SWIM-type [Geobacter metallireducens GS-15] Length = 1142 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 61/186 (32%), Gaps = 22/186 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 + + ++ QL K++ L +E+ ++V F S L Sbjct: 947 ALTAILRLRQLCLSPRLLI---ADSREPSPKVEFLVEQLEELFTEGHSVLVFSQFTSFLD 1003 Query: 83 R----------LQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNI 131 + + + + +G P + + G GLNL Sbjct: 1004 IVEGELSRRGVHYYRLDGSTPVPERKRLVTAFQKGDEPSVFLLSLKAGGKGLNLTR-ATY 1062 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW+ +E R + G R V + L+ ++TI+E +++ + K + Sbjct: 1063 VFHLDPWWNPA-----VENQASDRAHRIGQTRQVTITRLVMRHTIEEKMMELKKRKLKLY 1117 Query: 192 DLLLNA 197 LL Sbjct: 1118 HALLEE 1123 >gi|255327378|ref|ZP_05368452.1| helicase/SNF2 family domain protein [Rothia mucilaginosa ATCC 25296] gi|255295658|gb|EET75001.1| helicase/SNF2 family domain protein [Rothia mucilaginosa ATCC 25296] Length = 1384 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 76/212 (35%), Gaps = 21/212 (9%) Query: 2 KQYH---KFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + +R+ L+ + F +LA A + + V K Sbjct: 1159 RIYDTHLQRERQKVLGLLEDMDKNRFTIFQSLTLLRRLALDAAL-IDPDAYAGVSSVKRD 1217 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEG 107 L + ++V F L + + I+ + G Sbjct: 1218 YLVQQLPDLLEKGHRVLVFSQFTGYLKSISVRLAEEGIGHLYLDGSTRNRAEVIEAFTSG 1277 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + P+ + G GLNL + + WW+ QQ ++RI + G + V V Sbjct: 1278 QEPVFLISLKAGGFGLNLTE-ADHVFIMDPWWNPAAEQQAVDRI-----HRIGQDKEVHV 1331 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y L+A+ TI+E V+Q +K+ + D ++ + Sbjct: 1332 YRLVAEGTIEEKVMQLKESKAALFDAVVGEGE 1363 >gi|322707206|gb|EFY98785.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Metarhizium anisopliae ARSEF 23] Length = 1416 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 81/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 K Y + D +G A ++ ++ +L N +DE ++ Sbjct: 783 KLYKQMVTHNKLVVSDGKGGKTNARGLSNMIMQLRKLCNHPFVFDEVENVMNPMSISNDL 842 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K +++ + + + ++ D+ Sbjct: 843 LWRTAGKFELLDRILPKYQATGHRVLMFFQMTAIMDIMEDYLRYRKFEYLRLDGTTKSDE 902 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 903 RSDLLKEFNAPDSKYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 956 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R R K + ++ A + Sbjct: 957 RAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGR 1001 >gi|295319060|gb|ADF99437.1| helicase, SNF2/RAD54 family [Clostridium botulinum F str. 230613] Length = 1050 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 71/206 (34%), Gaps = 27/206 (13%) Query: 2 KQY----HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++E Y +++ S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIENY---EGSNGK 907 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 + L I+ I++ F S L D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ +E R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQASDRAHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKST 189 V V LIA+ TI+E + + K Sbjct: 1022 TVEVIRLIAKGTIEEKIYKITTKKER 1047 >gi|328915095|gb|AEB55928.1| helicase, Snf2 family [Chlamydophila psittaci 6BC] Length = 1130 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 75/203 (36%), Gaps = 20/203 (9%) Query: 8 QREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 ++EL +G + + + + Q+ + + + K L ++ Sbjct: 916 KKELSRLVKQEGFDRIHIHVLATLTRLKQICCHPAIFA-KDVPEPGDSAKYDLLMDLLSS 974 Query: 66 A--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 ++ + L+ + + + G T ++ Q + + + Sbjct: 975 LVETGHKTVLFSQYTKMLSIIKKDLEARGVRFVYLDGSTKNRLEIVNQFNEDPGLLVFLI 1034 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + +WW+ +E R + G R+V Y L+ N Sbjct: 1035 SLKAGGTGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQNRSVSSYKLVTLN 1088 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 TI+E +L K ++ ++N+ Sbjct: 1089 TIEEKILTLQNRKKSLVKKVINS 1111 >gi|68467034|ref|XP_722432.1| hypothetical protein CaO19.9102 [Candida albicans SC5314] gi|46444408|gb|EAL03683.1| hypothetical protein CaO19.9102 [Candida albicans SC5314] Length = 1690 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 78/227 (34%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 K Y + R + N+ ++ ++ ++ N Y+E ++ + Sbjct: 1035 KLYQQMLRYNMLYAGDPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETN 1094 Query: 53 ------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA----------RLQKAFPQGRTL 94 K + L+ ++ K +++ + + G Sbjct: 1095 DQIWRVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKA 1154 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1155 DDRTDLLKSFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 1208 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +N+++E++L+R K I ++ A K Sbjct: 1209 QDRAHRIGQKNEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGK 1255 >gi|258514714|ref|YP_003190936.1| SNF2-related protein [Desulfotomaculum acetoxidans DSM 771] gi|257778419|gb|ACV62313.1| SNF2-related protein [Desulfotomaculum acetoxidans DSM 771] Length = 891 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 73/210 (34%), Gaps = 22/210 (10%) Query: 2 KQYHKF---QRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEK 55 + Y + + E +A + Q+ +W K Sbjct: 668 ELYESILISVKNEIARMPNRFEIKDASTVLEGLLYLRQVCCHPALLKRTLNWNHCDESGK 727 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTIQEWN 105 ++ I++ AN ++V F S L+ ++K F K + + Sbjct: 728 FDLFKLKIDELQANHEKVVVFSQFTSMLSIMKKWAEEQGYATFYLDGATMKRQEVVDSFE 787 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + F + G GLN+ + + WW+ +E R + G K+ V Sbjct: 788 RSDEGVFFISLKAGGVGLNIVS-CQYAIIYDPWWNPA-----VENQASDRIYRIGQKKNV 841 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 FVY+L+ N+I+E + + K I D LL Sbjct: 842 FVYHLVTANSIEEKIEKLKTEKREIADNLL 871 >gi|309777116|ref|ZP_07672080.1| SWF/SNF family helicase [Erysipelotrichaceae bacterium 3_1_53] gi|308915125|gb|EFP60901.1| SWF/SNF family helicase [Erysipelotrichaceae bacterium 3_1_53] Length = 1077 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 77/201 (38%), Gaps = 21/201 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKA 66 ++L +Q E ++ F + + ++ A E + K+K ++ + Sbjct: 859 QDLQKKMQMEEVDKFQVLAMMTRLREICCDARLLYEN---VTLPSTKLKGCMDLLLSARN 915 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEGKIPLLFAHP 116 + +++ F S L +++ ++++ G+ + Sbjct: 916 SGRRVLLFSSFTSMLGLIEEQLRTENIRYLKLTGETKKELRHAYVEQFQNGEADVFLISL 975 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL I++ + WW+L R + G + V VY LI +++I Sbjct: 976 KAGGTGLNLTN-AEIVIHYDPWWNLSAQ-----NQATDRAYRIGQTKDVQVYKLIMKDSI 1029 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +++ K + D +N+ Sbjct: 1030 EEKIMKLQERKHILSDTFINS 1050 >gi|74008383|ref|XP_865586.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 19 [Canis familiaris] Length = 1055 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 86/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NSA K ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ K Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGK 639 >gi|302824854|ref|XP_002994066.1| hypothetical protein SELMODRAFT_236903 [Selaginella moellendorffii] gi|300138072|gb|EFJ04853.1| hypothetical protein SELMODRAFT_236903 [Selaginella moellendorffii] Length = 1046 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 65/199 (32%), Gaps = 25/199 (12%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWK------EVHDEKIKALEVII--EKANAAPIIVAY 75 N+ ++ N + E K K+ + ++ K ++V Sbjct: 599 NALYGIDILRKICNHPDLLEREASEKHADYGLPDRSGKLMVVSQVLNSWKDQGHRVLVFC 658 Query: 76 H----------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLN 124 F + ++ + P I E+NE + + G G N Sbjct: 659 QTQQMLDIVEIFVESQGYTYRRMDGSTSVKQRPALIDEFNESSHVFVFLLTTKVGGLGTN 718 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G N ++ F W+ R + G + V VY LI + TI+E V R Sbjct: 719 LT-GANRVIIFDPDWNPSTDM-----QARERAWRIGQTKDVIVYRLITRGTIEEKVYHRQ 772 Query: 185 RTKSTIQDLLLNALKKETI 203 K + + +L ++ + Sbjct: 773 IYKQFLTNKILRDPQQRRV 791 >gi|293351213|ref|XP_002727727.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Rattus norvegicus] Length = 1065 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 86/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 420 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 479 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 480 PPYTTDEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 539 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 540 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 594 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 595 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 646 >gi|62185488|ref|YP_220273.1| putative helicase [Chlamydophila abortus S26/3] gi|62148555|emb|CAH64326.1| putative helicase [Chlamydophila abortus S26/3] Length = 1165 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 75/203 (36%), Gaps = 20/203 (9%) Query: 8 QREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 ++EL +G + + + + Q+ + + + K L ++ Sbjct: 951 KKELSRLVKQEGFDRIHIHVLATLTRLKQICCHPAIFA-KDVPEPGDSAKYDLLMDLLSS 1009 Query: 66 A--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 ++ + L+ + + + G T ++ Q + + + Sbjct: 1010 LVETGHKTVLFSQYTKMLSIIKKDLEARGVRFVYLDGSTKNRLEIVNQFNEDPGLLVFLI 1069 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + +WW+ +E R + G R+V Y L+ N Sbjct: 1070 SLKAGGTGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQNRSVSSYKLVTLN 1123 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 TI+E +L K ++ ++N+ Sbjct: 1124 TIEEKILTLQNRKKSLVKKVINS 1146 >gi|150017499|ref|YP_001309753.1| non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] gi|149903964|gb|ABR34797.1| Non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] Length = 1085 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 68/189 (35%), Gaps = 21/189 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN 78 + K Q+ + KI AL ++E+ I+V F Sbjct: 883 SKIEILAYITKLRQICLDPSVTMDNY---LGSSGKIDALIELLEQSIDEGHKILVFSQFT 939 Query: 79 SDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 S L + K + + E+N G+ + + G GLNL Sbjct: 940 SVLKNISKILKEKNFLFSYLDGSVSSINRMKMVDEFNNGENTVFLVSLKAGGTGLNLTS- 998 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +I++ F WW+ +E R + G K V V LIAQ TI+E +++ +K Sbjct: 999 ADIVIHFDPWWNPA-----VEDQATDRAHRIGQKNVVEVIKLIAQGTIEEKIVELQDSKR 1053 Query: 189 TIQDLLLNA 197 + + +L Sbjct: 1054 ELINKILGD 1062 >gi|302814766|ref|XP_002989066.1| hypothetical protein SELMODRAFT_450679 [Selaginella moellendorffii] gi|300143167|gb|EFJ09860.1| hypothetical protein SELMODRAFT_450679 [Selaginella moellendorffii] Length = 1043 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 65/199 (32%), Gaps = 25/199 (12%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWK------EVHDEKIKALEVII--EKANAAPIIVAY 75 N+ ++ N + E K K+ + ++ K ++V Sbjct: 596 NALYGIDILRKICNHPDLLEREASEKHADYGLPDRSGKLMVVSQVLNSWKDQGHRVLVFC 655 Query: 76 H----------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLN 124 F + ++ + P I E+NE + + G G N Sbjct: 656 QTQQMLDIVEIFVESQGYTYRRMDGSTSVKQRPALIDEFNESSHVFVFLLTTKVGGLGTN 715 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G N ++ F W+ R + G + V VY LI + TI+E V R Sbjct: 716 LT-GANRVIIFDPDWNPSTDM-----QARERAWRIGQTKDVIVYRLITRGTIEEKVYHRQ 769 Query: 185 RTKSTIQDLLLNALKKETI 203 K + + +L ++ + Sbjct: 770 IYKQFLTNKILRDPQQRRV 788 >gi|157822125|ref|NP_001100766.1| DNA excision repair protein ERCC-6 [Rattus norvegicus] gi|149034143|gb|EDL88913.1| excision repair cross-complementing rodent repair deficiency, complementation group 6 (predicted) [Rattus norvegicus] Length = 1325 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 77/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 K Y F + +Y L GEN S V ++ N + +E Sbjct: 678 KVYQNFIDSKAVYRILNGEN----QIFSGLVALRKICNHPDLFSGGPKNTSALPEDGLEE 733 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 E+ K+ +E ++ +++ L L+ Sbjct: 734 EQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTT 793 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I ++N + I + G G+NL G N ++ + W+ + Sbjct: 794 TIASRQPLITKYNEDTSIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPST-----DTQ 847 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 848 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 897 >gi|148692894|gb|EDL24841.1| mCG6355 [Mus musculus] Length = 1330 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 78/230 (33%), Gaps = 40/230 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------DEEKH 47 K Y F + +Y L GEN S V ++ N + DE + Sbjct: 679 KVYQNFIDSKAVYRILNGEN----QIFSGLVALRKICNHPDLFSGGPKNASGPPEDELEE 734 Query: 48 WKEVH---DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 + H K+ +E ++ +++ L L+ Sbjct: 735 EQFGHWRRSGKMIVVESLLKIWHRQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTT 794 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T+ I ++N + I + G G+NL G N ++ + W+ + Sbjct: 795 TIASRQPLITKYNEDTSIFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPST-----DTQ 848 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 849 ARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 898 >gi|223992919|ref|XP_002286143.1| rad54-like protein [Thalassiosira pseudonana CCMP1335] gi|220977458|gb|EED95784.1| rad54-like protein [Thalassiosira pseudonana CCMP1335] Length = 549 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 66/237 (27%), Gaps = 43/237 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------- 52 Y + R ++ G + ++ N Sbjct: 290 LYEDYLRS--DEVMGVMRGSVQLLKAVTVLRKICNHPDLVVGPDGRTLDSVQEESSSDND 347 Query: 53 --------------DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ------ 90 K++ L I+ I+ + L +++ + Sbjct: 348 DDGCFYGDERFVEVSGKLQVLAKILPLWHKQGHRFILFCQWRKTLNIIEQFTRKQNWKFA 407 Query: 91 ----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + ++N + G G N +V F W+ + Sbjct: 408 RLDGNTNVASRQKLVDKFNNDESYFCMLMTTRTGGVGLNVTGANRVVIFDPDWNPQT--- 464 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R + G K+ V VY LI TI+E + QR K+ I + +L K+ + Sbjct: 465 --DAQARERAWRFGQKKDVTVYRLITAGTIEEKIYQRQIFKTAITNQVLQDPKQRRL 519 >gi|321259505|ref|XP_003194473.1| helicase [Cryptococcus gattii WM276] gi|317460944|gb|ADV22686.1| Helicase, putative [Cryptococcus gattii WM276] Length = 1848 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 76/244 (31%), Gaps = 56/244 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAF-------NSASKTVKCLQLANGAVYYDEEKHWKEV--- 51 + Y +F R + G IE + +L N + + + Sbjct: 1543 QLYDEFSRSKAAEEAGMEIEKPASKEGQGHVFQSLQYLRKLCNHPALVLDGEPQRFKEIQ 1602 Query: 52 -------------HDEKIKALEVIIEKAN-------------AAPIIVAYHF-------- 77 H K++AL +++ +++ Sbjct: 1603 KKIGGGPGLHDLSHAPKMEALRQLLQDCGIGLPPDKLADDVTTHRVLIFCQLRPMLDIIE 1662 Query: 78 -----NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 K +Q +N + +I +L + G GLNL G + Sbjct: 1663 KDLFGTHMPTVSYMRLDGSTDPRKRHAIVQTFNADPRIDVLLLTTSVGGLGLNLT-GADT 1721 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F W+ M + + R + G ++ V VY LI + T++E ++ R K I Sbjct: 1722 VIFVDHDWNP-----MKDLQAMDRAHRLGQRKVVNVYRLITRGTLEEKIMGLQRFKLNIA 1776 Query: 192 DLLL 195 ++ Sbjct: 1777 SSVV 1780 >gi|329943255|ref|ZP_08292029.1| type III restriction enzyme, res subunit [Chlamydophila psittaci Cal10] gi|313848406|emb|CBY17410.1| putative helicase [Chlamydophila psittaci RD1] gi|325506467|gb|ADZ18105.1| SNF2 family helicase [Chlamydophila psittaci 6BC] gi|328814802|gb|EGF84792.1| type III restriction enzyme, res subunit [Chlamydophila psittaci Cal10] Length = 1165 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 75/203 (36%), Gaps = 20/203 (9%) Query: 8 QREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 ++EL +G + + + + Q+ + + + K L ++ Sbjct: 951 KKELSRLVKQEGFDRIHIHVLATLTRLKQICCHPAIFA-KDVPEPGDSAKYDLLMDLLSS 1009 Query: 66 A--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 ++ + L+ + + + G T ++ Q + + + Sbjct: 1010 LVETGHKTVLFSQYTKMLSIIKKDLEARGVRFVYLDGSTKNRLEIVNQFNEDPGLLVFLI 1069 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + +WW+ +E R + G R+V Y L+ N Sbjct: 1070 SLKAGGTGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQNRSVSSYKLVTLN 1123 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 TI+E +L K ++ ++N+ Sbjct: 1124 TIEEKILTLQNRKKSLVKKVINS 1146 >gi|283781798|ref|YP_003372553.1| Non-specific serine/threonine protein kinase [Pirellula staleyi DSM 6068] gi|283440251|gb|ADB18693.1| Non-specific serine/threonine protein kinase [Pirellula staleyi DSM 6068] Length = 594 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 75/206 (36%), Gaps = 27/206 (13%) Query: 4 YHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y ++E DL G+ I + ++ Q+ N K++ LE Sbjct: 371 YQMAEKEGVMDLNNMGDQITIQHVFELVLRLKQICN--------FDPVTGCSAKLERLEA 422 Query: 62 IIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKIP 110 +E+ + IV + L + Q + +DP Q + K Sbjct: 423 DLEEVAASGKKAIVFSQWVRCLDQITEKLQRFNPLSYHGQIPSKKRDPILKQFKEDKKHS 482 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + GLNLQ+ + F WW+ IE + R + G V V + Sbjct: 483 VLLMSYGAGSVGLNLQF-CEYVFLFDRWWNPA-----IEDQAINRAHRIGAAGPVTVTRM 536 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A TI+E + Q L K I + +L+ Sbjct: 537 LAMGTIEERINQVLEHKREIFNTILS 562 >gi|58260538|ref|XP_567679.1| hypothetical protein CNK02030 [Cryptococcus neoformans var. neoformans JEC21] gi|57229760|gb|AAW46162.1| hypothetical protein CNK02030 [Cryptococcus neoformans var. neoformans JEC21] Length = 1558 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 K Y Q+ + + N + ++ ++ N + E V + Sbjct: 947 KLYESVQKYKTLPTDMSVAKPQKRQNLQNALMQLRKICNHPYVFREVDEDFTVGNTTDEQ 1006 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDK 96 K + L+ I+ K +++ + + + Sbjct: 1007 IIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDFRGWKYCRLDGSTKAED 1066 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N+ P + + G GLNLQ + ++ + W+ + Sbjct: 1067 RQTLLSTFNDPNSPYQVFILSTRAGGLGLNLQS-ADTVIIYDTDWNP-----HADLQAQD 1120 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI+ T++ELVL R + K I ++ A K Sbjct: 1121 RAHRIGQKKEVRVLRLISSGTVEELVLARAQRKLEIDGKVIQAGK 1165 >gi|322694140|gb|EFY85978.1| DNA repair protein Rhp26/Rad26, putative [Metarhizium acridum CQMa 102] Length = 1162 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 72/226 (31%), Gaps = 39/226 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDE-------EKHWK 49 K Y F L + + A S ++ N D+ Sbjct: 672 KAYETF-------LGSDEVSAILNRRRQSLYGIDILRKICNHPDLLDKSLGSKIGYNFGS 724 Query: 50 EVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 K++ + +++K ++ L ++K + +D+ Sbjct: 725 PKLSAKLELTKDLLQKVMIPKGHKTLLFSQGKLMLNIIEKCMRECNISYLRLDGETPVDQ 784 Query: 97 DPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N I + + G G NL G + ++ F W+ + R Sbjct: 785 RQPMIDRFNADLSIHVFLMTTRTGGLGTNLT-GADRIIIFDPDWNPST-----DLQARER 838 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V +Y L+ + TI+E + R K + + +L K+ Sbjct: 839 AWRLGQNKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQR 884 >gi|282890240|ref|ZP_06298770.1| hypothetical protein pah_c014o119 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499897|gb|EFB42186.1| hypothetical protein pah_c014o119 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 883 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 68/200 (34%), Gaps = 18/200 (9%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPI 71 +L G + ++ Q+ + + V K+ L +E Sbjct: 679 ELDGISKHRMEVLEAILRLRQICCHPLLVT-AQEGSFVASAKLDVLMQDLETLAEEGKKA 737 Query: 72 IVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +V F S L + G T +++ Q + IP + G G Sbjct: 738 LVYSQFTSMLGLIAKEFQKRGWNFVYLDGSTHNREKVVTQFQEDASIPFFLISLKAGGVG 797 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + + F WW+ + IE + R + G + V LIA +I+E + + Sbjct: 798 LNLTS-ADYVYLFDPWWN-----EAIENQAIDRAHRIGRQDTVIAKRLIAIESIEEKIQK 851 Query: 183 RLRTKSTIQDLLLNALKKET 202 K + + L + +T Sbjct: 852 LKENKRQLIESLFDETYGQT 871 >gi|240952196|ref|XP_002399349.1| helicase, putative [Ixodes scapularis] gi|215490555|gb|EEC00198.1| helicase, putative [Ixodes scapularis] Length = 624 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 68/196 (34%), Gaps = 25/196 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH------DEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 + ++ N + K++ L+ ++ + +++ Sbjct: 363 LMDLRKICNHPYLFRWVDPTGPADEELVAASGKLRLLDCMLPELRRRKHKVLLFSQMTRV 422 Query: 81 LARLQKAFP----QGRTLDKDPCTIQEW-------NEGKIPLLFAHPASCGHGLNLQYGG 129 L L+ + LD N+ + + G G+NL GG Sbjct: 423 LDILEDYCHLRHFRHCRLDGRTKVEDRQLQMHLFNNDPSYFVFLLSTRAGGLGINLT-GG 481 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + +V F W+ + + + R + G R V VY L+ + T+++ +++R K Sbjct: 482 DTVVLFDSDWNPQ-----CDLQAMDRCHRIGQTRPVVVYRLVTRGTVEQRMVERASAKRK 536 Query: 190 IQDLLLNALKKETIHV 205 ++ +++ + V Sbjct: 537 LEKIIMQKGARRFSRV 552 >gi|311745326|ref|ZP_07719111.1| Snf2 family protein [Algoriphagus sp. PR1] gi|126577862|gb|EAZ82082.1| Snf2 family protein [Algoriphagus sp. PR1] Length = 974 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 73/211 (34%), Gaps = 26/211 (12%) Query: 3 QYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + + G N + F + Q+AN ++ E K+ Sbjct: 754 VYEEVKNYYREKIISDIKATGRNTQQFTLLRGLTQLRQIANHPKMVRDDY---EGESGKL 810 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWN 105 + + +++ ++V F L+ +++ + G T D+ Sbjct: 811 EDITYMLQSTISENHKVLVFSQFVRHLSIVKEYLDKEGIPYSYLDGSTKDRQAQVEAFQE 870 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 I + + G GLNL + WW+ +E + R + G + V Sbjct: 871 NDDIKVFLISLKAGGVGLNLTK-AEYVFLLDPWWNPA-----VEAQAIDRAHRIGQENKV 924 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Y I++N+++E ++ K + L+ Sbjct: 925 IIYKFISRNSVEEKIMALQNRKLALAGELIG 955 >gi|67606806|ref|XP_666775.1| chromatin remodelling complex protein SNF2L [Cryptosporidium hominis TU502] gi|54657830|gb|EAL36543.1| chromatin remodelling complex protein SNF2L [Cryptosporidium hominis] Length = 1292 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 72/217 (33%), Gaps = 28/217 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVHD 53 K Y + L + + ++ + N +D E Sbjct: 455 KIYSELLTRNLDVLNSASSNKTQMLNLLMQLRKTCNHPYLFDGVEPGPPYVEGFHMVEAS 514 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTI 101 K+ L ++ K + + +++ L + + I Sbjct: 515 GKMVLLHKLLPKLFSQGSRVLLFSQMTRLLDIIDDYLRWSGYPYCRIDGSTPGIERQERI 574 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N+ + + G G+NL ++++ F ++ + ++ + R + Sbjct: 575 DIFNKEGSEKLIFLLSTRAGGIGINL-ATADVVILFDSDFNPQ-----MDLQAMDRAHRI 628 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ V VY + + T++E +++R K + L++ Sbjct: 629 GQKKPVTVYRFVTEKTVEERIVERAAKKLKLDSLIIQ 665 >gi|14028667|gb|AAK52453.1|AF325920_1 DNA-dependent ATPase SNF2L [Mus musculus] Length = 1064 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 418 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 477 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 478 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 537 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 538 DGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 592 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 593 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 644 >gi|60679768|ref|YP_209912.1| SNF family helicase [Bacteroides fragilis NCTC 9343] gi|60491202|emb|CAH05950.1| putative SNF family helicase [Bacteroides fragilis NCTC 9343] Length = 1016 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 16/203 (7%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 + L + ++F + ++ QL+ + + +I + ++ Sbjct: 806 LRNILLEQTAEKGQQSFTVLNGILRLRQLSCHPQLFLPDFIGDSGKLYQIIETFETL-RS 864 Query: 67 NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +++ F L AF G + ++ + + KI Sbjct: 865 EGHKVLIFSSFVKHLELVAGEFRKRKWDYAFLTGSSTNRPEEIARFNRDPKIQAFLISLK 924 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + + WW+ E + R + G V Y I Q +I+ Sbjct: 925 AGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQNNQVIAYRFITQGSIE 978 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 E ++Q K + + + ++ Sbjct: 979 EKIIQLQEEKRKLAETFITDTEQ 1001 >gi|149174125|ref|ZP_01852753.1| swi/snf family helicase_2 [Planctomyces maris DSM 8797] gi|148847105|gb|EDL61440.1| swi/snf family helicase_2 [Planctomyces maris DSM 8797] Length = 642 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 72/206 (34%), Gaps = 23/206 (11%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +++ L G++I + ++ Q+ N + ++++A Sbjct: 407 AYETAEKDGVIQLNEMGDSITVQHVFELVLRLKQITN-----FDPVTGDSCKLDRLEADM 461 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTIQEWN-EGKIPL 111 I A+ I+ + L + K + G + + ++ + L Sbjct: 462 EEI-AASGGKAILFSQWTKPLDFMAKRLERFGTLVYHGGIPTKQREPILDQFKHDPDSHL 520 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + GLNLQ+ + F WW+ IE + R + G K V V + Sbjct: 521 LLMSYGTGAVGLNLQF-AGYVFLFDRWWNPA-----IEDQAINRAHRIGQKTQVIVTKFV 574 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 NTI+E + L K + +L Sbjct: 575 CNNTIEERIDMVLEQKRELFRSILGD 600 >gi|300743764|ref|ZP_07072784.1| SNF2/helicase domain protein [Rothia dentocariosa M567] gi|300380125|gb|EFJ76688.1| SNF2/helicase domain protein [Rothia dentocariosa M567] Length = 1318 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 79/209 (37%), Gaps = 21/209 (10%) Query: 3 QYH---KFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + +R+ L+ + F +LA A + + V K++ Sbjct: 1095 IYDMHLQRERQKVLGLLEDMDKNRFTIFQSLTLLRRLALDATL-IDPDEYAGVASAKLEY 1153 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGK 108 L + + ++V F L + T P ++++ EG Sbjct: 1154 LVEHLPSLLGDGHRVLVFSQFTGYLRTIAERLQAEGIDYLYLDGTTRNRPQVLKDFAEGT 1213 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P+ + G GLNL + WW+ QQ ++RI + G +R V VY Sbjct: 1214 APVFLISLKAGGFGLNLTE-ADHCFIMDPWWNPAAEQQAVDRI-----HRLGQERDVHVY 1267 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+A+ TI+E V+ +K+ + D ++N Sbjct: 1268 RLVAEGTIEEKVMDLKASKAALFDAVVND 1296 >gi|15896682|ref|NP_350031.1| DNA/RNA helicase, SNF2 [Clostridium acetobutylicum ATCC 824] gi|15026531|gb|AAK81371.1|AE007841_6 DNA/RNA helicase, SNF2 [Clostridium acetobutylicum ATCC 824] Length = 949 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 21/204 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ + + ++ S + Q+ E+ + K+K I Sbjct: 731 VYAEYIKSVKAMMKNHKDGRVQIFSYLTRLRQICLDPSLILEDYN---GGSGKLKTALEI 787 Query: 63 IEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPL 111 I +++ F S L + ++N I + Sbjct: 788 IRGHEG-KVLLFSQFTSALYKIEECLRKEKIKFFHLDGSTKPQDRINMVNDFNSNNAIKV 846 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL N+++ F WW+ +E R + G K V V L+ Sbjct: 847 FLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----VENQATDRAHRIGQKNVVEVIKLV 900 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 A+ TI+E ++ K + D ++ Sbjct: 901 AKGTIEEKIILLQEDKKELIDNVI 924 >gi|325510846|gb|ADZ22482.1| NA/RNA helicase, SNF2 [Clostridium acetobutylicum EA 2018] Length = 966 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 21/204 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ + + ++ S + Q+ E+ + K+K I Sbjct: 748 VYAEYIKSVKAMMKNHKDGRVQIFSYLTRLRQICLDPSLILEDYN---GGSGKLKTALEI 804 Query: 63 IEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPL 111 I +++ F S L + ++N I + Sbjct: 805 IRGHEG-KVLLFSQFTSALYKIEECLRKEKIKFFHLDGSTKPQDRINMVNDFNSNNAIKV 863 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL N+++ F WW+ +E R + G K V V L+ Sbjct: 864 FLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----VENQATDRAHRIGQKNVVEVIKLV 917 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 A+ TI+E ++ K + D ++ Sbjct: 918 AKGTIEEKIILLQEDKKELIDNVI 941 >gi|313898129|ref|ZP_07831668.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] gi|312957157|gb|EFR38786.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] Length = 527 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 75/199 (37%), Gaps = 21/199 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKA 66 ++L +Q E ++ F + + ++ A E + K++ ++ + Sbjct: 302 QDLQKRMQMEEVDKFQVLAMMTRLREICCDARLLYEN---VTLPSTKLRGCMDLLLNARN 358 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEGKIPLLFAHP 116 + +++ F S L +++ ++++ G+ + Sbjct: 359 SGRRVLLFSSFTSMLELIEEQLRVENIRYLKLTGETKKELRHAYVEKFQNGEADVFLISL 418 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL I++ + WW+L R + G + V VY LI ++TI Sbjct: 419 KAGGTGLNLTN-AEIVIHYDPWWNLSAQ-----NQATDRAYRIGQTKDVQVYKLIMKDTI 472 Query: 177 DELVLQRLRTKSTIQDLLL 195 +E +++ K + D + Sbjct: 473 EEKIMKLQERKHILSDTFI 491 >gi|34559250|gb|AAQ75381.1| global transcription activator Snf2p [Pichia angusta] Length = 1461 Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 76/226 (33%), Gaps = 34/226 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVH----- 52 K YH+ + + + +A K ++ ++ N + + Sbjct: 855 KLYHQMLKYNQLFIGDSDSKAPVGIKGMNNKLMQLRKICNHPYVFPAIEDMINPSHENND 914 Query: 53 -----DEKIKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLD 95 K + L+ I+ K + +++ + + D Sbjct: 915 TIWRVSGKFELLDRILPKFRASGHRVLMFFQMTQIMDIMEDFLRFRGMHYMRLDGDTRAD 974 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++++N P + + G GLNLQ + ++ F W+ + + Sbjct: 975 DRTALLKDFNSEDSPYFVFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQ 1028 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++I+E +L+R K I ++ A K Sbjct: 1029 DRAHRIGQKNEVRILRLITSDSIEEYILERAHQKLDIDGKVIQAGK 1074 >gi|297621841|ref|YP_003709978.1| putative SNF2-family protein [Waddlia chondrophila WSU 86-1044] gi|297377142|gb|ADI38972.1| putative SNF2-family protein [Waddlia chondrophila WSU 86-1044] Length = 1204 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 77/206 (37%), Gaps = 20/206 (9%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEV 61 K + L +L + I + S Q+ N Y + + + K + + Sbjct: 979 DKMRGNLIRELNDQTSPIPYLHVFSLLSSLKQICNHPAAYLKNPVDYDKYQSGKWELFKE 1038 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWN-EGKIP 110 +I + + ++V + + L +Q+ + R ++ +N + + Sbjct: 1039 LISEALESDQKVVVFSQYLAMLDIMQQYLDEQRIGYATIRGATLDRGEVVRRFNADSRCK 1098 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G++L ++++ + WW+ E R + G +R V V+ L Sbjct: 1099 VFLGSLQAAGLGIDLTA-ASVVIHYDRWWNAAR-----EDQATDRVHRIGQQRGVQVFKL 1152 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 + T +E + + + K + + ++ Sbjct: 1153 VTLGTFEERIDEMITRKGRLMEEVIG 1178 >gi|196014269|ref|XP_002116994.1| hypothetical protein TRIADDRAFT_60972 [Trichoplax adhaerens] gi|190580485|gb|EDV20568.1| hypothetical protein TRIADDRAFT_60972 [Trichoplax adhaerens] Length = 1002 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 82/233 (35%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y + QRE Y + ++I+ N + ++ + N + Sbjct: 354 VKVYVGLSRMQREWYTKILMKDIDIVNGAGKTDKMRLLNILMQLRKCCNHPYLFDGAEPG 413 Query: 43 --DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 + K+ LE ++ +A + ++V L L+ Sbjct: 414 PPYTTDTHLATNCGKMVVLEKLLPRLQAQGSRVLVFSQMTRMLDILEDYCMWKGYKYCRL 473 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +IQ +N + G G+NL ++++ + W+ + Sbjct: 474 DGSTPHEDRQASIQAFNMPDSDKFLFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 528 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ R + G + V V+ I NTI+E +++R TK + +++ + Sbjct: 529 -VDLQAQDRAHRIGQTKEVKVFRFITDNTIEERIVERAETKLRLDRIVIQQGR 580 >gi|326923687|ref|XP_003208066.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial [Meleagris gallopavo] Length = 1498 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 71/231 (30%), Gaps = 41/231 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 + Y F +E+Y L G+ S V ++ N + + Sbjct: 771 RVYQNFIDSKEVYQILNGD----MQVFSGLVALRKICNHPDLFSGGPKILKCLPDADLEE 826 Query: 51 -------VHDEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQG 91 K+ +E ++ ++ F D Sbjct: 827 ADQFGYWKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFVRDRNYSYLRMDGT 886 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T+ I +N + I + G G+NL G + ++ + W+ + Sbjct: 887 TTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNLT-GADRVIIYDPDWNPST-----DT 940 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 941 QARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 991 >gi|311113008|ref|YP_003984230.1| hypothetical protein HMPREF0733_11339 [Rothia dentocariosa ATCC 17931] gi|310944502|gb|ADP40796.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931] Length = 1319 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 78/209 (37%), Gaps = 21/209 (10%) Query: 3 QYH---KFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + +R+ L + F +LA A + + V K++ Sbjct: 1096 IYDMHLQRERQKVLGLLDDMDKNRFTIFQSLTLLRRLALDATL-IDPDEYAGVASAKLEY 1154 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGK 108 L + + ++V F L + T P ++++ EG Sbjct: 1155 LVEHLPSLLGDGHRVLVFSQFTGYLRTIAERLQAEGIDYLYLDGTTRNRPQVLKDFAEGA 1214 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P+ + G GLNL + WW+ QQ ++RI + G +R V VY Sbjct: 1215 APVFLISLKAGGFGLNLTE-ADHCFIMDPWWNPAAEQQAVDRI-----HRLGQERDVHVY 1268 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+A+ TI+E V+ +K+ + D ++N Sbjct: 1269 RLVAEGTIEEKVMDLKASKAALFDAVVND 1297 >gi|320581785|gb|EFW96004.1| global transcription activator Snf2p [Pichia angusta DL-1] Length = 1461 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 76/226 (33%), Gaps = 34/226 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVH----- 52 K YH+ + + + +A K ++ ++ N + + Sbjct: 855 KLYHQMLKYNQLFIGDSDSKAPVGIKGMNNKLMQLRKICNHPYVFPAIEDMINPSHENND 914 Query: 53 -----DEKIKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLD 95 K + L+ I+ K + +++ + + D Sbjct: 915 TIWRVSGKFELLDRILPKFRASGHRVLMFFQMTQIMDIMEDFLRFRGMHYMRLDGDTRAD 974 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++++N P + + G GLNLQ + ++ F W+ + + Sbjct: 975 DRTALLKDFNSEDSPYFVFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQ 1028 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++I+E +L+R K I ++ A K Sbjct: 1029 DRAHRIGQKNEVRILRLITSDSIEEYILERAHQKLDIDGKVIQAGK 1074 >gi|294501844|ref|YP_003565544.1| SNF2 family helicase [Bacillus megaterium QM B1551] gi|294351781|gb|ADE72110.1| SNF2 family helicase [Bacillus megaterium QM B1551] Length = 876 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 70/212 (33%), Gaps = 23/212 (10%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + + + + + + K L N Y +E K+ K + Sbjct: 650 LYQELVQGMLQETEEKTGFERKGMILQTLNKLKLLCNHPALYLKESAAKQTVRRSHKSEK 709 Query: 59 LEVII--EKANAAPIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ + ++ + ++ + ++ + ++ Sbjct: 710 IIELVESIRTQQESCLIFTQYIETGLMLQRTLEKEINEPVLFLHGSLSKEQRDAMVAQFQ 769 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K + + G GLNL N ++ F WW+ +E R + G + V Sbjct: 770 ARKKAIFILSLRAGGTGLNLTA-ANHVIHFDRWWNPA-----VENQATDRAHRIGQNKFV 823 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + TI+E + + + K + + L+ Sbjct: 824 HVHKFITRGTIEEKIDEVMNQKQHLNNELIQG 855 >gi|89897903|ref|YP_515013.1| SWF/SNF family helicase [Chlamydophila felis Fe/C-56] gi|89331275|dbj|BAE80868.1| swi/snf family helicase 2 [Chlamydophila felis Fe/C-56] Length = 1165 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 75/203 (36%), Gaps = 20/203 (9%) Query: 8 QREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 ++EL +G + + + + Q+ + + + K L ++ Sbjct: 951 KKELSRLVKQEGFDRIHIHVLATLTRLKQICCHPAIFA-KDVPEPGDSAKYDLLMDLLSS 1009 Query: 66 A--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 ++ + L+ + + + G T ++ Q + + + Sbjct: 1010 LVETGHKTVLFSQYTKMLSIIKKDLEASGVRFVYLDGSTKNRLELVNQFNEDPGLLVFLI 1069 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++ + +WW+ +E R + G R+V Y L+ N Sbjct: 1070 SLKAGGTGLNL-VGADTVIHYDMWWNPA-----VENQATDRVHRIGQNRSVSSYKLVTLN 1123 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 TI+E +L K ++ ++N+ Sbjct: 1124 TIEEKILTLQNRKKSLVKKVINS 1146 >gi|315650300|ref|ZP_07903372.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315487411|gb|EFU77721.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 449 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 82/210 (39%), Gaps = 21/210 (10%) Query: 3 QYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y K +RE + +L G + +K ++ Q G + D + + V K+ ALE Sbjct: 241 IYSKIKRESFAELDGGGKVTVTTVLTKLLRLQQFTGGFLVADGSEKAELVSKGKLNALEE 300 Query: 62 IIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EG 107 II+ +++ F ++ + + + + ++++ Sbjct: 301 IIDDYVVDADKKLVIFARFRPEIDLIGQMLTKKKIKYGAIYGDVKLEDRGGIVKDFQTNE 360 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + A + G G+ L + ++S+ ++ + Q + RI + G K Sbjct: 361 NTKVFLAQIDTAGLGITLTAADTCV-YYSVNFNYAAYTQSLARI-----HRIGQKNICTY 414 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +LI + T+DE +L+ L K + +++ Sbjct: 415 IHLITEGTVDETILKALARKEDLAKTIVDE 444 >gi|302406510|ref|XP_003001091.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Verticillium albo-atrum VaMs.102] gi|261360349|gb|EEY22777.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Verticillium albo-atrum VaMs.102] Length = 1392 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 81/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 K Y + D QG A ++ ++ +L N + E ++ + Sbjct: 755 KLYKQMVTHNKIVVSDGQGGKTGARGLSNMIMQLRKLCNHPFVFGEVENVMNPLNISDDK 814 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K +++ + + + ++ + Sbjct: 815 LWRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDYLRYRNYQYMRLDGTTKSDE 874 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++++N P + G GLNLQ + ++ + W+ + + Sbjct: 875 RSDLLKDFNAPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 928 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R R K + ++ A + Sbjct: 929 RAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGR 973 >gi|254582697|ref|XP_002499080.1| ZYRO0E03190p [Zygosaccharomyces rouxii] gi|238942654|emb|CAR30825.1| ZYRO0E03190p [Zygosaccharomyces rouxii] Length = 1052 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 68/211 (32%), Gaps = 29/211 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYD------EEKHWKEVHDEKIKALEVII--EK 65 +L+ ++ N D E + K++ ++ ++ + Sbjct: 586 ELEDIKGGKRRVLYGIDILRKICNHPDLLDRDERSKEASYGDPKRSGKMQVVKQLLLLWR 645 Query: 66 ANAAPIIVAYHFNSDLARLQKA---------------FPQGRTLDKDPCTIQEWNEGKIP 110 ++ L LQ+ T+ + E+N G Sbjct: 646 KEGHKALLFTQSRQMLDILQEFIAFKDQELTGLKFLRMDGTTTISIRQSLVDEFNRGDYN 705 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G N ++ F W+ R + G KR V +Y L Sbjct: 706 VFLLTTRVGGIGVNLT-GANRIIIFDPDWNPSTDM-----QARERAWRIGQKREVSIYRL 759 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +I+E + R K + + +L+ K++ Sbjct: 760 MVTGSIEEKIYHRQIFKQFLTNKILSDPKQK 790 >gi|160915633|ref|ZP_02077841.1| hypothetical protein EUBDOL_01640 [Eubacterium dolichum DSM 3991] gi|158432109|gb|EDP10398.1| hypothetical protein EUBDOL_01640 [Eubacterium dolichum DSM 3991] Length = 1102 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 25/211 (11%) Query: 2 KQY----HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + REL + ++ + + K QL E H K+K Sbjct: 881 KLYVAHLAQVNRELSQMVNMQSTDKITILAMLTKLRQLCCEPRLVFENIHE---PSSKLK 937 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN 105 A +I+ K N +++ F S L ++ ++ + Sbjct: 938 ACIHLIQTLKENKQKVLLFSSFTSMLELIADELYKEGISYYILTGATNKEERRELVERFQ 997 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL ++ + WW+ Q + R + G ++ V Sbjct: 998 NDSTTVFLISLKAGGTGLNLTS-AEAVIHYDPWWN-----QSAQNQATDRAYRIGQRKKV 1051 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ L+ +N+I+E + + K + D+ + Sbjct: 1052 QVFKLVMKNSIEEKIQKLQLMKKELADMFVE 1082 >gi|156553964|ref|XP_001602814.1| PREDICTED: similar to hCG32740 [Nasonia vitripennis] Length = 1131 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 66/204 (32%), Gaps = 32/204 (15%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEV-------------HDEKIKALEVII--EKANAAP 70 ++ N + + +EV K+ + ++ K Sbjct: 593 LVALTALRKICNHPDLFLYTDNNQEVLDENEMEKFGHWKRAGKMTVVRSLLKIWKKQGHR 652 Query: 71 IIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 +++ + L + + T+ ++N + + Sbjct: 653 VLLFTQSRQMMHILEGLLQKEKYNYLRMDGTTPMGQRQLTVTKFNQDPSYFVFLLTTRVG 712 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G N ++ + W+ + R + G +++V VY LI TI+E Sbjct: 713 GLGVNLT-GANRVIIYDPDWNPAT-----DAQARERAWRIGQEKSVTVYRLITAGTIEEK 766 Query: 180 VLQRLRTKSTIQDLLLNALKKETI 203 + R K + + +L ++ + Sbjct: 767 MYHRQVFKILLSNKVLEDPRQRRL 790 >gi|108758570|ref|YP_631070.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108462450|gb|ABF87635.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622] Length = 1002 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 71/205 (34%), Gaps = 25/205 (12%) Query: 3 QYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y ++E+ L + ++ Q A ++ K++ Sbjct: 786 VYDAVMAATRKEVVALLNEGG-SVLKALEALLRLRQAACHPALVPGQRANT---SSKVET 841 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDPCTIQEWNEG 107 L +E + +V + S L ++ G T ++ T + ++ Sbjct: 842 LVDALETAVSEGHKALVFSQWTSLLDLIEPRLKAAGIGFGRLDGTTANRGEVTERFQSQE 901 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+L + G GLNL + + WW+ Q R + G +R V V Sbjct: 902 GEPVLLMSLKAGGTGLNLTA-ADHVFLVDPWWNPAAEAQA-----ADRAHRIGQERTVMV 955 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQD 192 Y L++Q T++E +L K I + Sbjct: 956 YRLVSQGTVEERILGLQEKKRAIFE 980 >gi|308809077|ref|XP_003081848.1| putative SNF2 domain-containing protein (ISS) [Ostreococcus tauri] gi|116060315|emb|CAL55651.1| putative SNF2 domain-containing protein (ISS) [Ostreococcus tauri] Length = 1782 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 72/229 (31%), Gaps = 34/229 (14%) Query: 2 KQYHKFQRE--------LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH- 52 K Y F+ A + +L + + K Sbjct: 1485 KMYDSFESSDAKSAAVSAVEGGGNAEGAAAHVFQTLQYLRKLCSHPKLVSDTTSKKFDPD 1544 Query: 53 --DEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQGRT-------------L 94 K A E ++V S L ++ + Sbjct: 1545 MRSPKFDAGEDAKPNPAAGAGHRVLVFSQLKSLLDLVETELFTTQMRDVSWLRLDGSVAP 1604 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++++N + I +L G GLNL + +VF W+ ++ + + Sbjct: 1605 SQRFDVVRKFNADPSIDVLLLTTHVGGLGLNLTS-ADTVVFLEHDWNPQK-----DLQAM 1658 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G ++ V VY ++ + T++E ++ R K + + ++NA Sbjct: 1659 DRAHRLGQRKTVNVYRILTRGTLEEKIMSLQRFKLDVANAVVNADNASM 1707 >gi|67464359|pdb|1Z63|A Chain A, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE IN COMPLEX With Dsdna gi|67464360|pdb|1Z63|B Chain B, Sulfolobus Solfataricus Swi2SNF2 ATPASE CORE IN COMPLEX With Dsdna Length = 500 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 67/210 (31%), Gaps = 23/210 (10%) Query: 4 YHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y L+ ++ S +K Q+ + K Sbjct: 274 YKAEVENLFNNIDSVTGIKRKGXILSTLLKLKQIVDHPALLK-GGEQSVRRSGKXIRTXE 332 Query: 62 IIEK--ANAAPIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTI-QEWNEG 107 IIE+ I + F +L + + I + N Sbjct: 333 IIEEALDEGDKIAIFTQFVDXGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNP 392 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G G+NL N ++ F WW+ +E R + G R V V Sbjct: 393 SVKFIVLSVKAGGFGINLTS-ANRVIHFDRWWNPA-----VEDQATDRVYRIGQTRNVIV 446 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + LI+ T++E + Q L K ++ ++++ Sbjct: 447 HKLISVGTLEEKIDQLLAFKRSLFKDIISS 476 >gi|73977923|ref|XP_532592.2| PREDICTED: similar to DNA repair and recombination protein RAD54-like (RAD54 homolog) (hRAD54) (hHR54) [Canis familiaris] Length = 907 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 82/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F ++ +L+ + + S +L N ++ +E Sbjct: 582 ELYKRFLKQAKPAEELREGKMTVSS-LSSITLLKKLCNHPALIYDKCVEEEDGFEGALEI 640 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFP------ 89 K+ L+ I+ ++ +++ ++ L +K Sbjct: 641 FPPTYSAKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY 700 Query: 90 ----QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 701 VRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 759 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 760 -----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 808 >gi|315224242|ref|ZP_07866081.1| Snf2 family helicase [Capnocytophaga ochracea F0287] gi|314945790|gb|EFS97800.1| Snf2 family helicase [Capnocytophaga ochracea F0287] Length = 950 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + R + E I FN+ + ++ +++ D+E E++ Sbjct: 733 KWYETEKSKVRNQLLQIN-EPITEFNTLNMLMRLRKISLHPKLVDKESKITSGKYEEVIN 791 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEG 107 + +++ ++ F S LA ++ + + ++ N Sbjct: 792 YMEELLQSS-RKALIFSSFVSHLALYEEWCNKKGIKYAKLTGETPSFERKNQVEMFQNNP 850 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I F + GLNL + ++ WW+ E+ + R + G + V V Sbjct: 851 TISFFFISLKAGEVGLNLTQ-ASYVLLLDPWWNP-----FSEKQAIGRAHRIGQQNKVNV 904 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++++TI+E +++ ++K + + +++ Sbjct: 905 IRFVSKDTIEEKIIKLQKSKRELSENIIDE 934 >gi|125995400|ref|NP_001075098.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Danio rerio] gi|124481629|gb|AAI33098.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Danio rerio] Length = 1028 Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 87/233 (37%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEEKH- 47 +K Y K QRE Y + ++I+ NS + ++ + N +D + Sbjct: 386 IKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPG 445 Query: 48 -------WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 V+ K+ L+ ++ K + +++ L L+ Sbjct: 446 PPYTTDLHLVVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRL 505 Query: 93 ----TLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +I +NE + G G+NL ++++ + W+ + Sbjct: 506 DGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 560 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ I NT++E +++R K + +++ + Sbjct: 561 -VDLQAMDRAHRIGQKKQVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 612 >gi|294056264|ref|YP_003549922.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] gi|293615597|gb|ADE55752.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] Length = 1024 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 79/214 (36%), Gaps = 26/214 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 + Y + ++ + N+ + ++ Q DE E Sbjct: 798 RFYQDTLEKTRREIFNLEMGGANAGRLQFAAFKELLRLRQACVDPRILDETFAASE--SA 855 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQE 103 K+ A + ++++ N + ++V F S L + + G+T ++ + Sbjct: 856 KLAAFDEVLDECLDNGSRMLVFSSFVSALQLLAQHLKAKGHRFNYLDGQTKNRLALCDEF 915 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + IP+ + G GLNL G + +V + WW+ E R + G ++ Sbjct: 916 NEDASIPVFLISLKAGGTGLNLT-GADTVVHYDPWWNPAA-----EAQATDRAHRIGQEK 969 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIA NT++E VL+ K+ + L Sbjct: 970 VVTSIKLIAANTVEEKVLELQAKKAELLAELFEE 1003 >gi|254975778|ref|ZP_05272250.1| putative helicase [Clostridium difficile QCD-66c26] gi|255093165|ref|ZP_05322643.1| putative helicase [Clostridium difficile CIP 107932] gi|255314907|ref|ZP_05356490.1| putative helicase [Clostridium difficile QCD-76w55] gi|255517581|ref|ZP_05385257.1| putative helicase [Clostridium difficile QCD-97b34] gi|255650692|ref|ZP_05397594.1| putative helicase [Clostridium difficile QCD-37x79] gi|260683779|ref|YP_003215064.1| putative helicase [Clostridium difficile CD196] gi|260687439|ref|YP_003218573.1| putative helicase [Clostridium difficile R20291] gi|260209942|emb|CBA63920.1| putative helicase [Clostridium difficile CD196] gi|260213456|emb|CBE05136.1| putative helicase [Clostridium difficile R20291] Length = 1059 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + +++ ++ +N++ S K QL ++ + KI+ Sbjct: 837 KIYSVYSKDIQDKMKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYN---KKSSKIETC 893 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 I+ I++ F S L + + E+N Sbjct: 894 LEILRDSINENHKILLFSQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNS 953 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL ++++ F WW+ +E R + G K +V Sbjct: 954 MDKKVFLISLKAGGTGLNLTS-ADMVIHFDPWWNPS-----VENQASDRAHRFGQKNSVQ 1007 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIA+ TI+E +++ +K + + +N Sbjct: 1008 VIKLIAKGTIEEKIIKLQESKKELINQFING 1038 >gi|220673001|emb|CAX12380.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Danio rerio] gi|220678449|emb|CAX12948.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Danio rerio] Length = 1035 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 87/233 (37%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEEKH- 47 +K Y K QRE Y + ++I+ NS + ++ + N +D + Sbjct: 393 IKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPG 452 Query: 48 -------WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 V+ K+ L+ ++ K + +++ L L+ Sbjct: 453 PPYTTDLHLVVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRL 512 Query: 93 ----TLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +I +NE + G G+NL ++++ + W+ + Sbjct: 513 DGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 567 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ I NT++E +++R K + +++ + Sbjct: 568 -VDLQAMDRAHRIGQKKQVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 619 >gi|62667352|ref|XP_229124.3| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Rattus norvegicus] Length = 1062 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 86/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 417 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 476 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 477 PPYTTDEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 536 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 537 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 591 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 592 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 643 >gi|299741616|ref|XP_001831930.2| transcription activator snf2l1 [Coprinopsis cinerea okayama7#130] gi|298404796|gb|EAU89829.2| transcription activator snf2l1 [Coprinopsis cinerea okayama7#130] Length = 1102 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 80/229 (34%), Gaps = 39/229 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEK 46 + QR+ Y + ++I+A N + ++ ++ + Sbjct: 384 EMQRKWYRSVLEKDIDAVNGLTGKKEGKTRLMNIVMQLRKVTCHPYLFDGAEPGPPYTTD 443 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTL 94 + K+ L+ ++ + +++ + L G Sbjct: 444 EHLIQNSGKMVILDKLLKMMYQKGSRVLIFSQMSRVLDILEDYCLFRGYKYCRIDGGTAH 503 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N+ + + G G+NL +I+V + W+ + + Sbjct: 504 EDRIAAIDEYNKPGSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQA 557 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G + V+VY I + +++E +L+R K + L++ + + Sbjct: 558 MDRAHRIGQTKQVYVYRFITEGSVEERMLERAAQKLRLDQLVIQQGRAQ 606 >gi|224085664|ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222857105|gb|EEE94652.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1206 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 68/218 (31%), Gaps = 27/218 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY------YDEEKHWKEVHDEKI 56 Y F +++ + NS ++ N Y + K+ Sbjct: 684 VYRAFL--ASTEVENILDGSRNSLYGIDVMRKICNHPDLLEREHSYHNPDYGNPERSGKM 741 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC----------TIQEW 104 K + ++ + +++ L + G + I E+ Sbjct: 742 KVVAQVLKVWQEQGHRVLLFTQTQQMLDIFENFLNSGGYNYRRMDGSTPIKLRMSIIDEF 801 Query: 105 NE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N G I + G G NL G N ++ F W+ R + G K+ Sbjct: 802 NNSGDIFIFILTTKVGGLGTNLT-GANRVIIFDPDWNPSTDM-----QARERAWRIGQKK 855 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V VY LI TI+E V R K + + +L ++ Sbjct: 856 DVTVYRLITGGTIEEKVYHRQIYKHFLTNKILKNPQQR 893 >gi|226943215|ref|YP_002798288.1| helicase protein [Azotobacter vinelandii DJ] gi|226718142|gb|ACO77313.1| helicase protein [Azotobacter vinelandii DJ] Length = 872 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 18/177 (10%) Query: 33 LQLANGAVYYDEEKH--WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA------ 82 Q+ ++E + K+ AL ++E+ A +++ F L Sbjct: 681 RQVCCDLRLLEDEAVAGCQAADSAKLSALLPMLEELSAEGRRVLLFSQFTGMLELIAREL 740 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 R ++E+ G++P+ + G GLNL + ++ F WW+ Sbjct: 741 EARKIPYVQLTGATRDRRTPVEEFQAGRVPVFLISLKAGGAGLNLTA-ADTVIHFDPWWN 799 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E R + G + VFVY LIA+ +++E + + K+ + LL Sbjct: 800 PAA-----EAQASDRAYRIGQDKPVFVYRLIARGSVEEKIQHLQKAKAELAHGLLEG 851 >gi|118089662|ref|XP_420329.2| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Gallus gallus] Length = 1031 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 386 VKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 445 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 446 PPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRL 505 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 506 DGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 560 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 561 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 612 >gi|255307194|ref|ZP_05351365.1| putative helicase [Clostridium difficile ATCC 43255] Length = 1059 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + +++ ++ +N++ S K QL ++ + KI+ Sbjct: 837 KIYSVYSKDIQDKMKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYN---KKSSKIETC 893 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 I+ I++ F S L + + E+N Sbjct: 894 LEILRDSINENHKILLFSQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNS 953 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL ++++ F WW+ +E R + G K +V Sbjct: 954 MDKKVFLISLKAGGTGLNLTS-ADMVIHFDPWWNPS-----VENQASDRAHRFGQKNSVQ 1007 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIA+ TI+E +++ +K + + +N Sbjct: 1008 VIKLIAKGTIEEKIIKLQESKKELINQFING 1038 >gi|168023352|ref|XP_001764202.1| transcription-coupled repair protein CSB/RAD26 [Physcomitrella patens subsp. patens] gi|162684642|gb|EDQ71043.1| transcription-coupled repair protein CSB/RAD26 [Physcomitrella patens subsp. patens] Length = 802 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 69/215 (32%), Gaps = 30/215 (13%) Query: 11 LYCDLQGENIEAF-----NSASKTVKCLQLANGAVY--------YDEEKHWKEVHDEKIK 57 L +E NS ++ N + + + + K+ Sbjct: 270 YRAFLASSEVEQIFDGNRNSLFGIDILRKICNHPDLLEREHSAGHPDYGNIERSGKLKVL 329 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWNEG 107 A + + K +++ L ++ + + I E+NEG Sbjct: 330 AQVLELWKTQGHRVLLFTQTQQMLDIVENYVTSKGYVYRRMDGNTPVKQRMQLIDEFNEG 389 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G G NL G N +V F W+ R + G K+ V Sbjct: 390 DHVFIFILTTKVGGLGTNL-IGANRVVIFDPDWNPSTDM-----QARERAWRIGQKKEVV 443 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +Y LI + TI+E V R K + + +L ++ Sbjct: 444 IYRLITRGTIEEKVYHRQIYKHFLTNKILRDPQQR 478 >gi|255101318|ref|ZP_05330295.1| putative helicase [Clostridium difficile QCD-63q42] Length = 1059 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + +++ ++ +N++ S K QL ++ + KI+ Sbjct: 837 KIYSVYSKDIQDKMKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYN---KKSSKIETC 893 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 I+ I++ F S L + + E+N Sbjct: 894 LEILRDSINENHKILLFSQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNS 953 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL ++++ F WW+ +E R + G K +V Sbjct: 954 MDKKVFLISLKAGGTGLNLTS-ADMVIHFDPWWNPS-----VENQASDRAHRFGQKNSVQ 1007 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIA+ TI+E +++ +K + + +N Sbjct: 1008 VIKLIAKGTIEEKIIKLQESKKELINQFING 1038 >gi|300858235|ref|YP_003783218.1| ATP-dependent helicase [Corynebacterium pseudotuberculosis FRC41] gi|300685689|gb|ADK28611.1| ATP-dependent helicase [Corynebacterium pseudotuberculosis FRC41] gi|302205957|gb|ADL10299.1| ATP dependent helicase [Corynebacterium pseudotuberculosis C231] gi|302330510|gb|ADL20704.1| ATP-dependent helicase [Corynebacterium pseudotuberculosis 1002] gi|308276192|gb|ADO26091.1| ATP-dependent helicase [Corynebacterium pseudotuberculosis I19] Length = 1031 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 71/218 (32%), Gaps = 26/218 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y + ++ + + K Q+ N ++ + V K+ Sbjct: 799 LYRAYVEDIQKQIDQAEGISKRGLVLSALTKIKQICNHPAHFLSDDSDVTVKGKHRSGKV 858 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQE 103 + L ++ + +++ + + G + ++ Sbjct: 859 EELMRLVSDAVESEQRLLIFTQYRAFGEILAPYLSDYFGAQIPFLHGGVSKVGRDRMVEN 918 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + P + + G GLNL +I+V WW+ +E R + G + Sbjct: 919 FQSPQGPPAMILSLKAGGTGLNLTA-ASIVVHMDRWWNPA-----VENQATDRAFRIGQR 972 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V VY +I T++E + L K+ + ++ + Sbjct: 973 KDVTVYKMITAGTLEESIQDILDGKTQLASAVVGEGEG 1010 >gi|260801499|ref|XP_002595633.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae] gi|229280880|gb|EEN51645.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae] Length = 1464 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 69/229 (30%), Gaps = 41/229 (17%) Query: 8 QRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYY----------------DEE 45 Q+E Y D G + + + ++ N ++ Sbjct: 780 QKEAYKDYLGSRECQQILDGQYQVFAGLITLRKICNHPDLVTGGPRIMVGTDESTLTKDQ 839 Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQGRT 93 + K+ + ++ +++ F D + T Sbjct: 840 HYGYWKRSGKMIVVNTLLKMWHKQGHRVLLFSQSKQMLDLMEEFVQDQSYTYMRMDGTTT 899 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I ++N + I + G G+NL G N ++ F W+ Sbjct: 900 ISSRQPKITKFNKDTSIFVFLLTTRVGGLGVNLT-GANRVIIFDPDWNPSTDM-----QA 953 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V +Y L+ TI+E + R K + + +L ++ Sbjct: 954 RERAWRIGQSKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVLKDPRQR 1002 >gi|296450398|ref|ZP_06892154.1| SNF2/RAD54 family helicase [Clostridium difficile NAP08] gi|296879479|ref|ZP_06903473.1| SNF2/RAD54 family helicase [Clostridium difficile NAP07] gi|296260659|gb|EFH07498.1| SNF2/RAD54 family helicase [Clostridium difficile NAP08] gi|296429625|gb|EFH15478.1| SNF2/RAD54 family helicase [Clostridium difficile NAP07] Length = 1062 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + +++ ++ +N++ S K QL ++ + KI+ Sbjct: 840 KIYSVYSKDIQDKIKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYN---KKSSKIETC 896 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 I+ I++ F S L + + E+N Sbjct: 897 LEILRDSINENHKILLFSQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNS 956 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL ++++ F WW+ +E R + G K +V Sbjct: 957 IDKKVFLISLKAGGTGLNLTS-ADMVIHFDPWWNPS-----VENQASDRAHRFGQKNSVQ 1010 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIA+ TI+E +++ +K + + +N Sbjct: 1011 VIKLIAKGTIEEKIIKLQESKKELINQFING 1041 >gi|13507759|ref|NP_109708.1| helicases [Mycoplasma pneumoniae M129] gi|2493354|sp|P75093|Y020_MYCPN RecName: Full=Uncharacterized ATP-dependent helicase MPN_020 gi|1673793|gb|AAB95782.1| helicase-like protein [Mycoplasma pneumoniae M129] Length = 1030 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 82/208 (39%), Gaps = 24/208 (11%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + +++ ++ +FN + +K L + + + K +A Sbjct: 813 KLYEEERDRGLEEIKQIQDKSSFNILTLILKLRHLCSLP----KNSQGILENSAKKEAAL 868 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGK 108 II + N II+ F + F ++ I+++N K Sbjct: 869 EIIHEAIENQRKIILFTQFIDVIDHFKDTFKEQGIEYFIFDGRKSPKSRHSIIEKFNNAK 928 Query: 109 IP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P +L A + G G+NL +++ F +WW+ +E R + G K+ V V Sbjct: 929 NPCVLLASLKAGGVGINLTA-AEVVIHFDVWWNTA-----VENQATDRAHRIGQKKTVQV 982 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y +IA+NTI+E V Q K + L Sbjct: 983 YRIIAKNTIEERVCQVQAEKQELVSKTL 1010 >gi|153791718|ref|NP_001093467.1| probable global transcription activator SNF2L1 [Danio rerio] gi|148725854|emb|CAN88075.1| novel protein similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (smarca5) [Danio rerio] gi|148726278|emb|CAN88255.1| novel protein similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (smarca5) [Danio rerio] Length = 1036 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 86/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NSA K ++ + N + Sbjct: 372 VKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 431 Query: 43 --DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 ++ K+ AL+ ++ + + +++ L L+ Sbjct: 432 PPYTTDTHLVINSGKMVALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGFEYCRL 491 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I +N + + G G+NL ++++ + W+ + Sbjct: 492 DGNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 546 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G ++ V V+ LI NT++E +++R K + +++ + Sbjct: 547 -VDLQAMDRAHRIGQRKPVKVFRLITDNTVEERIVERAEMKLRLDSIVIQQGR 598 >gi|126699796|ref|YP_001088693.1| putative helicase [Clostridium difficile 630] gi|115251233|emb|CAJ69064.1| putative DEAD-like helicase [Clostridium difficile] Length = 1062 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 76/211 (36%), Gaps = 24/211 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + +++ ++ +N++ S K QL ++ + KI+ Sbjct: 840 KIYSVYSKDIQDKMKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYN---KKSSKIETC 896 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 I+ I++ F S L + + E+N Sbjct: 897 LEILRDSINENHKILLFSQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNS 956 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL ++++ F WW+ +E R + G K +V Sbjct: 957 MDKKVFLISLKAGGTGLNLTS-ADMVIHFDPWWNPS-----VENQASDRAHRFGQKNSVQ 1010 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V LIA+ TI+E +++ +K + + +N Sbjct: 1011 VIKLIAKGTIEEKIIKLQESKKELINQFING 1041 >gi|323454538|gb|EGB10408.1| hypothetical protein AURANDRAFT_23375 [Aureococcus anophagefferens] Length = 685 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 76/227 (33%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENI-------EAFNSASKTVKCLQLANGAVYYD--EEKHWKEVH 52 + Y + L G A+ ++ + N + E+++ + Sbjct: 376 QVYKSLLKRDASLLAGPEAGGDRAGASRAKMANIAMQLRKCCNHPYLFQGVEDRNLDPLG 435 Query: 53 DEKIKAL--------EVIIEKANAAPIIVAYH----------FNSDLARLQKAFPQGRTL 94 D + + K ++V F + + Sbjct: 436 DHVVANCGKLVLLDKLLAKLKDRGHRVLVFSQMTALLDVLEDFMAMRDYEYCRIDGNTSY 495 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I+ +N + + G G+NLQ + +V + W+ + + Sbjct: 496 EERDDLIEAYNAPNSDKFVFLLSTRAGGLGINLQT-ADTVVLYDSDWNPQA-----DLQA 549 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G K+ V VY L+ NTI+E +++R + K + +++ + Sbjct: 550 MDRAHRIGQKKPVHVYRLVTANTIEEKIVERAKKKLKLDAMVVQQGR 596 >gi|301768186|ref|XP_002919520.1| PREDICTED: DNA repair and recombination protein RAD54-like [Ailuropoda melanoleuca] Length = 838 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 82/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L+ + + S +L N ++ +E Sbjct: 513 ELYKRFLRQAKPAEELREGKMSVSS-LSSITLLKKLCNHPALIYDKCVEEEDGFEGALEI 571 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFP------ 89 K+ L+ I+ ++ +++ ++ L +K Sbjct: 572 FPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY 631 Query: 90 ----QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 632 VRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 690 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 691 -----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 739 >gi|301633331|gb|ADK86885.1| SNF2 family N-terminal domain protein [Mycoplasma pneumoniae FH] Length = 1030 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 82/208 (39%), Gaps = 24/208 (11%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + +++ ++ +FN + +K L + + + K +A Sbjct: 813 KLYEEERDRGLEEIKQIQDKSSFNILTLILKLRHLCSLP----KNSQGILENSAKKEAAL 868 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGK 108 II + N II+ F + F ++ I+++N K Sbjct: 869 EIIHEAIENQRKIILFTQFIDVIDHFKDTFKEQGIEYFIFDGRKSPKSRHSIIEKFNNAK 928 Query: 109 IP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P +L A + G G+NL +++ F +WW+ +E R + G K+ V V Sbjct: 929 NPCVLLASLKAGGVGINLTA-AEVVIHFDVWWNTA-----VENQATDRAHRIGQKKTVQV 982 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y +IA+NTI+E V Q K + L Sbjct: 983 YRIIAKNTIEERVCQVQAEKQELVSKTL 1010 >gi|74008365|ref|XP_865429.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 10 [Canis familiaris] Length = 1050 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 86/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NSA K ++ + N + Sbjct: 421 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 480 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 481 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 540 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 541 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 595 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 596 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 647 >gi|307149973|ref|YP_003885357.1| SNF2-like protein [Cyanothece sp. PCC 7822] gi|306980201|gb|ADN12082.1| SNF2-related protein [Cyanothece sp. PCC 7822] Length = 1047 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 69/215 (32%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKAL 59 Y K E +++ S +K Q+ N Y E + K+ L Sbjct: 814 LYQKLVDESLSNIEAATGIQRRGLILSLLLKLKQVCNHPAQYLKESRLNSGEKSGKLLRL 873 Query: 60 EVIIEKAN--AAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQEWNE 106 E ++E+ ++ F L R + I + Sbjct: 874 EEMLEELVEEGDRALIFTQFAEWGKLLQPYLTQKLGREVLFLYGATPRQQRQEMIDRFQN 933 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P+ + G GLNL N + WW+ +E R + G K+ Sbjct: 934 DPAGPPIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPA-----VENQATDRAFRIGQKQN 987 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ I T++E + + +K + + ++A + Sbjct: 988 VQVHKFICTGTLEEKINDMIESKKQLAEQTVDAGE 1022 >gi|327281442|ref|XP_003225457.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis carolinensis] Length = 1441 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 73/231 (31%), Gaps = 41/231 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY----------------D 43 + Y +F +E+Y L GE S ++ N + + Sbjct: 753 EVYKRFIDSKEVYQILNGE----MQIFSGLTALRKICNHPDIFSGGPKILKGVPDEELNE 808 Query: 44 EEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARL----------QKAFPQG 91 E+ K+ +E ++ +++ L + Sbjct: 809 EDHFGFWKRSGKMIVVESLLKIWYKQGHRVLLFTQSRQMLHIIEAFLKQRSYSYVKMDGT 868 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T+ I +N + I + G G+NL G + ++ + W+ + Sbjct: 869 TTVASRQPLISRFNEDTSIFIFLLTTRVGGLGVNLT-GADRVIIYDPDWNPST-----DT 922 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V VY L+ TI+E + R K + + +L K+ Sbjct: 923 QARERAWRIGQTKEVTVYRLLTAGTIEEKIYHRQIFKQFLTNRILKDPKQR 973 >gi|194271429|gb|ACF37172.1| SNF2LT [Homo sapiens] Length = 776 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWSPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|50294289|ref|XP_449556.1| hypothetical protein [Candida glabrata CBS 138] gi|49528870|emb|CAG62532.1| unnamed protein product [Candida glabrata] Length = 1730 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 78/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA----SKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 Y + + + + ++ ++ ++ N ++E + Sbjct: 1057 MYQQMLKHKQLFIGDQKKNKLVGLRGFNNQLMQLKKICNHPFVFEEVEDHINPTRDTNMN 1116 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + LE I+ K A+ +++ + + ++ D+ Sbjct: 1117 IWRVAGKFELLERILPKLKASRHRVLIFFQMTQIMDIMEDFLRYIDIKYLRLDGHTRSDE 1176 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N+ + G GLNLQ + ++ F W+ + + Sbjct: 1177 RGELLKLFNDPNSEYFCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 1230 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E++L+R K I ++ A K Sbjct: 1231 RAHRIGQKNEVRIIRLITTNSVEEVILERAYKKLDIDGKVIQAGK 1275 >gi|255724370|ref|XP_002547114.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida tropicalis MYA-3404] gi|240135005|gb|EER34559.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida tropicalis MYA-3404] Length = 1680 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 79/227 (34%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 K Y + R + N+ ++ ++ ++ N Y+E +H+ Sbjct: 1035 KLYQQMLRYNKLYTGDPENGAEPLTIKNANNQIMQLKKICNHPFVYEEVEHFINPSIETD 1094 Query: 53 ------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL----------QKAFPQGRTL 94 K + L+ ++ K +++ + + + G Sbjct: 1095 DQIWRVAGKFELLDKVLPKFKATGHKVLMFFQMTQIMNIMEDFLRFRGLKYMRLDGGTKA 1154 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1155 DDRTELLKLFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 1208 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +N+++E++L+R K I ++ A K Sbjct: 1209 QDRAHRIGQKNEVRILRLITENSVEEMILERAHAKLEIDGKVIQAGK 1255 >gi|169342801|ref|ZP_02863835.1| helicase, SNF2/RAD54 family [Clostridium perfringens C str. JGS1495] gi|169299058|gb|EDS81130.1| helicase, SNF2/RAD54 family [Clostridium perfringens C str. JGS1495] Length = 1084 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 73/204 (35%), Gaps = 24/204 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 +++ + IE S K QLA + + KI+ L I+ + Sbjct: 868 KKQDAEEFNKSKIE---ILSYITKLRQLALDPAVTINDYMGE---SAKIEVLVEILNQGI 921 Query: 66 ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I+V F S L + K + E+NEG+ + Sbjct: 922 EEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLIS 981 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL +I++ F WW+ +E R + G K V V LIA+ T Sbjct: 982 LKAGGTGLNLTS-ADIVIHFDPWWNPA-----VENQATDRAHRIGQKNVVEVIKLIAKGT 1035 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E V+ K + ++ + Sbjct: 1036 IEEKVVALQEEKKELISKIIEEGE 1059 >gi|209877158|ref|XP_002140021.1| chromatin remodelling complex SNF2H [Cryptosporidium muris RN66] gi|209555627|gb|EEA05672.1| chromatin remodelling complex SNF2H, putative [Cryptosporidium muris RN66] Length = 1288 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 27/220 (12%), Positives = 73/220 (33%), Gaps = 28/220 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVHD 53 K Y + L + ++ ++ N +D E Sbjct: 473 KIYSELLTRNLDILNNVTYNKTQMLNLLMQLRKVCNHPYLFDGVEPGPPYVEGFHMVEAS 532 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTI 101 K+ L ++ K + + +++ L + + I Sbjct: 533 GKMVLLHKLLPKLFSQGSRVLLFSQMTRLLDIIDDYLRWCGYPYCRIDGSTPGIERQERI 592 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N+ + + G G+NL ++++ F ++ + ++ + R + Sbjct: 593 DLFNKSGSDKLIFLLSTRAGGIGINL-ATADVVILFDSDFNPQ-----MDLQAMDRAHRI 646 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V VY + + +++E +++R K + L++ + Sbjct: 647 GQKKTVTVYRFVTEKSVEERIVERAAKKLKLDSLIIQQGR 686 >gi|197118846|ref|YP_002139273.1| helicase [Geobacter bemidjiensis Bem] gi|197088206|gb|ACH39477.1| helicase, putative [Geobacter bemidjiensis Bem] Length = 1120 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 70/190 (36%), Gaps = 20/190 (10%) Query: 25 SASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 + + +K Q+ + + + D + L + + ++V F S L Sbjct: 925 ALTAILKLRQICLSSKLILPQAPDRSPKIDFLVDQLMELFAE--GHSVLVFSQFTSFLDI 982 Query: 84 LQKAFPQG----------RTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNIL 132 +++ Q + + +Q + E P + + G GLNL + + Sbjct: 983 VEQGLSQHGIGFSRLDGSTPVSRRKEMVQRFQESAEPGVFLLSLKAGGRGLNLTR-ASYV 1041 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 WW+ +E R + G +R V + L+ +++I+E +++ + K + Sbjct: 1042 FHLDPWWNPA-----VESQASDRAHRIGQQRQVTITRLLMRHSIEEKMMELKKRKLKLYR 1096 Query: 193 LLLNALKKET 202 LL + E Sbjct: 1097 ALLEEAEHEG 1106 >gi|74008351|ref|XP_865312.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 4 [Canis familiaris] Length = 1042 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|196010573|ref|XP_002115151.1| hypothetical protein TRIADDRAFT_28849 [Trichoplax adhaerens] gi|190582534|gb|EDV22607.1| hypothetical protein TRIADDRAFT_28849 [Trichoplax adhaerens] Length = 849 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 73/215 (33%), Gaps = 26/215 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHDE 54 K Y + L + + ++ + N ++ E Sbjct: 252 KLYKALLQRNIESLTN-EASKTSLMNMLIQLRKCVNHPYLFNGIEPEPFEIGDHLINASG 310 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC----------TIQ 102 K+ L+ ++ K+ +++ L LQ + IQ Sbjct: 311 KLFLLDKLLPYLKSRGHKVLIFSQMTRMLDILQDYLSYKDYNYERLDGSVRGEERYLAIQ 370 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + + + G GLNL + ++FF ++ + + R + G Sbjct: 371 NFTDPDVFVFILSTKAGGVGLNLVA-ADTVIFFDSDFNPQN-----DIQAAARCHRIGQT 424 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V + +AQ+T++E++L+R K + D ++ Sbjct: 425 KPVKIIRFVAQSTVEEIILKRAEAKLKLTDAVIEG 459 >gi|224541793|ref|ZP_03682332.1| hypothetical protein CATMIT_00965 [Catenibacterium mitsuokai DSM 15897] gi|224525290|gb|EEF94395.1| hypothetical protein CATMIT_00965 [Catenibacterium mitsuokai DSM 15897] Length = 1067 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 64/210 (30%), Gaps = 23/210 (10%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + + + + K Q+ ++ K K++A Sbjct: 847 KLYLAHLAQANQLLKTLDGSKDRIQILAMLTKLRQICCEPRIVFDDVKHK---SSKMEAC 903 Query: 60 EVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEG 107 II K N IIV F S L +K + + Sbjct: 904 LNIIQTYKDNNKKIIVFSSFKSLLNLLAKELDKSKTSYYMLTGDTEKEKRKGLVDAYQND 963 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL +V F WW++ R + G K VFV Sbjct: 964 DTTVFLISLKAGGTGLNLTA-AEGVVHFDPWWNMSAQ-----NQATDRAYRIGQKNKVFV 1017 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y LI ++I+E + K + D + Sbjct: 1018 YKLIMADSIEEKIQTLQAAKKDLADRFVEG 1047 >gi|303276396|ref|XP_003057492.1| ran-binding dexh-box helicase [Micromonas pusilla CCMP1545] gi|226461844|gb|EEH59137.1| ran-binding dexh-box helicase [Micromonas pusilla CCMP1545] Length = 1514 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 71/221 (32%), Gaps = 31/221 (14%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVY--------YDEEKHWKEV 51 + Y + R++ L+G + ++ N +++ + Sbjct: 910 EAYRAYVHSRDVEEILEG----RREALGGIDVLRKIVNHPDLLERRTKAAHEKYGEVERS 965 Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC----------TI 101 + + + + K +++ L L+ + + I Sbjct: 966 GKQLVTQKVLELWKEQGHRVLLFSQTQQMLDILEAMVAKAGYPYRRMDGATPVSQRMTLI 1025 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N + + + G G+NL G + ++ + W+ + R + G Sbjct: 1026 DEFNTDANVFVFLLTTKVGGLGVNLT-GADRVLLYDPDWNPST-----DAQARERAWRIG 1079 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R V VY L+ TI+E V R K + +L K+ Sbjct: 1080 QTREVTVYRLVTAGTIEEKVYHRQIYKEFLTSKVLKDPKQR 1120 >gi|255577952|ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus communis] gi|223530676|gb|EEF32549.1| DNA repair and recombination protein RAD26, putative [Ricinus communis] Length = 1230 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 70/218 (32%), Gaps = 27/218 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKI 56 Y F +++ + NS ++ N + E + K+ Sbjct: 688 VYRAFL--ASTEVEQIIDGSRNSLYGIDVMRKICNHPDLLEREHSCQNPDYGNPDRSGKM 745 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP----------CTIQEW 104 + + ++ + +++ L L+ G + I E+ Sbjct: 746 RVVAQVLKVWREQGHRVLLFAQTQQMLDILEIFLNSGGYSYRRMDGLTPIKQRMALIDEF 805 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N + + G G NL G N ++ F W+ R + G KR Sbjct: 806 NNSNDVFIFILTTKVGGLGTNLT-GANRVIIFDPDWNPSTDM-----QARERAWRIGQKR 859 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V VY LI + TI+E V R K + + +L ++ Sbjct: 860 DVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQR 897 >gi|265764898|ref|ZP_06093173.1| SNF family helicase [Bacteroides sp. 2_1_16] gi|263254282|gb|EEZ25716.1| SNF family helicase [Bacteroides sp. 2_1_16] Length = 1016 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 16/203 (7%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 + L + ++F + ++ QL+ + +I + ++ Sbjct: 806 LRNILLEQTAEKGQQSFTVLNGILRLRQLSCHPQLVLPDFIGDSGKLYQIIETFETL-RS 864 Query: 67 NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +++ F L AF G + ++ + + KI Sbjct: 865 EGHKVLIFSSFVKHLELVAGEFRKRKWDYAFLTGSSTNRPEEIARFNRDPKIQAFLISLK 924 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + + WW+ E + R + G V Y I Q +I+ Sbjct: 925 AGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQNNQVIAYRFITQGSIE 978 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 E ++Q K + + + ++ Sbjct: 979 EKIIQLQEEKRKLAETFITDTEQ 1001 >gi|74008349|ref|XP_865296.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 3 [Canis familiaris] Length = 1058 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|116672340|ref|YP_833273.1| SNF2-related protein [Arthrobacter sp. FB24] gi|116612449|gb|ABK05173.1| SNF2-related protein [Arthrobacter sp. FB24] Length = 1154 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 73/210 (34%), Gaps = 22/210 (10%) Query: 2 KQYH---KFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ L + N F QL+ A D V K+ Sbjct: 934 KVYQTHLQRERQKILGLIEDVNKNRFTIFQSLTLLRQLSLDASLVDP--SLSGVRSSKLD 991 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEG 107 L +E A ++ F L ++++ + + E+ G Sbjct: 992 VLFEQLEDLVAEGHRALIFSQFTGFLGKVRERLVEEKIEFCYLDGSTRNRSDVVNEFKNG 1051 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + + WW+ E V R + G R V V Sbjct: 1052 SAPVFLISLKAGGFGLNLTE-ADYVFLLDPWWNPAS-----EAQAVDRTHRIGQARNVMV 1105 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI+E V+ KS + ++ Sbjct: 1106 YRLVAKDTIEEKVMALKAKKSQLFADVMEG 1135 >gi|253564436|ref|ZP_04841893.1| Snf2 family helicase [Bacteroides sp. 3_2_5] gi|251948212|gb|EES88494.1| Snf2 family helicase [Bacteroides sp. 3_2_5] gi|301161233|emb|CBW20771.1| putative SNF family helicase [Bacteroides fragilis 638R] Length = 1016 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 16/203 (7%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 + L + ++F + ++ QL+ + +I + ++ Sbjct: 806 LRNILLEQTAEKGQQSFTVLNGILRLRQLSCHPQLVLPDFIGDSGKLYQIIETFETL-RS 864 Query: 67 NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +++ F L AF G + ++ + + KI Sbjct: 865 EGHKVLIFSSFVKHLELVAGEFRKRKWDYAFLTGSSTNRPEEIARFNRDPKIQAFLISLK 924 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + + WW+ E + R + G V Y I Q +I+ Sbjct: 925 AGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQNNQVIAYRFITQGSIE 978 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 E ++Q K + + + ++ Sbjct: 979 EKIIQLQEEKRKLAETFITDTEQ 1001 >gi|134117101|ref|XP_772777.1| hypothetical protein CNBK1510 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255395|gb|EAL18130.1| hypothetical protein CNBK1510 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1409 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 K Y Q+ + + N + ++ ++ N + E V + Sbjct: 798 KLYESVQKYKTLPTDMSVAKPQKRQNLQNALMQLRKICNHPYVFREVDEDFTVGNTTDEQ 857 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDK 96 K + L+ I+ K +++ + + + Sbjct: 858 IIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDFRGWKYCRLDGSTKAED 917 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N+ P + + G GLNLQ + ++ + W+ + Sbjct: 918 RQTLLSTFNDPNSPYQVFILSTRAGGLGLNLQS-ADTVIIYDTDWNP-----HADLQAQD 971 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI+ T++ELVL R + K I ++ A K Sbjct: 972 RAHRIGQKKEVRVLRLISSGTVEELVLARAQRKLEIDGKVIQAGK 1016 >gi|227545238|ref|ZP_03975287.1| SNF2 helicase associated domain protein [Lactobacillus reuteri CF48-3A] gi|300909872|ref|ZP_07127333.1| non-specific serine/threonine protein kinase [Lactobacillus reuteri SD2112] gi|227184771|gb|EEI64842.1| SNF2 helicase associated domain protein [Lactobacillus reuteri CF48-3A] gi|300893737|gb|EFK87096.1| non-specific serine/threonine protein kinase [Lactobacillus reuteri SD2112] Length = 1161 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 76/213 (35%), Gaps = 27/213 (12%) Query: 3 QYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + L +Q + ++ + +L D KIK Sbjct: 940 LYQARAQRLIRQIQKQNDEEFQQNKLAVLAEITRLRELCCSPQLLD---SGYSGPSGKIK 996 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 A +I+ + I++ F S LA + E+N Sbjct: 997 ATMNLIKDEVADNHKILLFSQFTSALAILKEKLAKAGIKYFVIEGKTKKADRLQFVDEFN 1056 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + + G GLNL ++++ F WW++ E R + G K Sbjct: 1057 SYDQPAVFLISLKAGGTGLNLTS-ADVVIHFDPWWNIAA-----ENQATDRAHRIGQKNN 1110 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y +IAQNTI+E +++ + K+ + + +L+ Sbjct: 1111 VTIYKMIAQNTIEEKIIEMQQKKAALANSILSG 1143 >gi|182419549|ref|ZP_02950797.1| DNA/RNA helicase, SNF2 [Clostridium butyricum 5521] gi|237667122|ref|ZP_04527106.1| Non-specific serine/threonine protein kinase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376584|gb|EDT74159.1| DNA/RNA helicase, SNF2 [Clostridium butyricum 5521] gi|237655470|gb|EEP53026.1| Non-specific serine/threonine protein kinase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 1060 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 69/205 (33%), Gaps = 21/205 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +E+ + E + S QL E + + K + I Sbjct: 842 VYDACVKEIQDRINSEKMNNITIFSFLTTLRQLCLDPSLVTNEYNGE---SGKFNEVLNI 898 Query: 63 IEKANA-APIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG-KIP 110 I+K I++ F L + ++E+N Sbjct: 899 IKKDQKENKILLFSQFTKALKKLALKLDKEKIQYCYLDGSISSSARIKLVEEFNNDKNKR 958 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL N+++ F WW+ IE R + G KR V V L Sbjct: 959 VFLISLKAGGTGLNLTS-ANMVIHFDPWWNPS-----IEDQATDRAHRIGQKRDVEVIKL 1012 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 IA+ TI+E ++ K + + +L Sbjct: 1013 IAKGTIEEKIVLLQEDKRNLINDVL 1037 >gi|53711505|ref|YP_097497.1| Snf2 family helicase [Bacteroides fragilis YCH46] gi|52214370|dbj|BAD46963.1| Snf2 family helicase [Bacteroides fragilis YCH46] Length = 1016 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 16/203 (7%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 + L + ++F + ++ QL+ + +I + ++ Sbjct: 806 LRNILLEQTAEKGQQSFTVLNGILRLRQLSCHPQLVLPDFIGDSGKLYQIIETFETL-RS 864 Query: 67 NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +++ F L AF G + ++ + + KI Sbjct: 865 EGHKVLIFSSFVKHLELVAGEFRKRKWDYAFLTGSSTNRPEEIARFNRDPKIQAFLISLK 924 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + + WW+ E + R + G V Y I Q +I+ Sbjct: 925 AGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQNNQVIAYRFITQGSIE 978 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 E ++Q K + + + ++ Sbjct: 979 EKIIQLQEEKRKLAETFITDTEQ 1001 >gi|159476244|ref|XP_001696221.1| SNF2/RAD54 family protein [Chlamydomonas reinhardtii] gi|158282446|gb|EDP08198.1| SNF2/RAD54 family protein [Chlamydomonas reinhardtii] Length = 1877 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 65/220 (29%), Gaps = 30/220 (13%) Query: 6 KFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWK------EVHDEKIK 57 + R + I + + ++ N + K++ Sbjct: 1140 ELYRSYLASKEVGEILEGSRRALCGIDILRKVCNHPDLLERLSAQDAEDYGNPARSGKLR 1199 Query: 58 ALEVII--EKANAAPIIVAYHFNSDLA-------------RLQKAFPQGRTLDKDPCTIQ 102 E ++ +A ++ L G + I Sbjct: 1200 VAERVLDSWRAAGHKALLFCQTQQMLDIFEKLARSKKSPAWSYHRMDGGTPVASRSRLID 1259 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++N + L G G+NL G ++ + W+ + R + G Sbjct: 1260 DFNNNPDVFLFLLTTKVGGLGVNLT-GATRVMLYDPDWNPST-----DIQARERAWRIGQ 1313 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V +Y LI TI+E V R K+ + + +L +++ Sbjct: 1314 SQPVTIYRLITAGTIEEKVYHRQIYKNFLTNKVLRDPRQK 1353 >gi|330940925|ref|XP_003306005.1| hypothetical protein PTT_19012 [Pyrenophora teres f. teres 0-1] gi|311316706|gb|EFQ85893.1| hypothetical protein PTT_19012 [Pyrenophora teres f. teres 0-1] Length = 1393 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 72/225 (32%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSAS-KTVKCLQLANGAVYYDEEKHWKEVH------ 52 K Y + + S ++ +L N ++E + Sbjct: 813 KLYKQLVTHNRLMVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEEVEDVMNPTKSTNDL 872 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K +++ + + ++ + Sbjct: 873 LWRASGKFELLDRILPKFQATGHRVLMFFQMTQIMNIMEDYLRLRGMMYLRLDGATKADD 932 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N P + G GLNLQ + ++ + W+ + + Sbjct: 933 RSDLLRLFNAPDSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 986 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R K + ++ A K Sbjct: 987 RAHRIGQKNEVRILRLITSNSVEEKILERANYKLDMDGKVIQAGK 1031 >gi|74008353|ref|XP_865330.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 5 [Canis familiaris] Length = 1036 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|325964972|ref|YP_004242878.1| DNA/RNA helicase, superfamily II, SNF2 family [Arthrobacter phenanthrenivorans Sphe3] gi|323471059|gb|ADX74744.1| DNA/RNA helicase, superfamily II, SNF2 family [Arthrobacter phenanthrenivorans Sphe3] Length = 1144 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 72/210 (34%), Gaps = 22/210 (10%) Query: 2 KQYH---KFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ L + N F QL+ A D V K+ Sbjct: 924 KVYQTHLQRERQKILGLIEDVNKNRFTIFQSLTLLRQLSLDASLVDP--SLSAVRSSKLD 981 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEG 107 L +E A ++ F L ++++ + E+ G Sbjct: 982 VLFEQLEDLVAEGHRALIFSQFTGFLGKVRERLDEEKIEYCYLDGGTRNRADVVNEFKNG 1041 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + + WW+ E V R + G R V V Sbjct: 1042 SAPVFLISLKAGGFGLNLTE-ADYVFLLDPWWNPAS-----EAQAVDRTHRIGQARNVMV 1095 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI+E V+ KS + ++ Sbjct: 1096 YRLVAKDTIEEKVMALKARKSQLFSDVMEG 1125 >gi|74008363|ref|XP_865407.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 9 [Canis familiaris] Length = 1053 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 405 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 464 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 465 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 524 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 525 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 579 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 580 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 631 >gi|194466323|ref|ZP_03072310.1| Non-specific serine/threonine protein kinase [Lactobacillus reuteri 100-23] gi|194453359|gb|EDX42256.1| Non-specific serine/threonine protein kinase [Lactobacillus reuteri 100-23] Length = 1162 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 76/213 (35%), Gaps = 27/213 (12%) Query: 3 QYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + L +Q + ++ + +L D KIK Sbjct: 941 LYQARAQRLIRQIQKQNDEEFQQNKLAVLAEITRLRELCCSPQLLDRGYS---GPSGKIK 997 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 A +I+ + I++ F S LA + E+N Sbjct: 998 ATMNLIKDEVADNHKILLFSQFTSALAILKEKLAKAGIKYFVIEGKTKKADRLQFVDEFN 1057 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + + G GLNL ++++ F WW++ E R + G K Sbjct: 1058 SYDQPAVFLISLKAGGTGLNLTS-ADVVIHFDPWWNIAA-----ENQATDRAHRIGQKNN 1111 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y +IAQNTI+E +++ + K+ + + +L+ Sbjct: 1112 VTIYKMIAQNTIEEKIIEMQQKKAALANSILSG 1144 >gi|294659312|ref|XP_461680.2| DEHA2G03102p [Debaryomyces hansenii CBS767] gi|199433866|emb|CAG90128.2| DEHA2G03102p [Debaryomyces hansenii] Length = 1590 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 77/227 (33%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDL-----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-- 54 K Y + + + + N+ ++ ++ ++ N Y+E ++ E Sbjct: 950 KLYQQMLKYNILYASKPGEGDKPVLIKNANNQIMQLRKICNHPFVYEEVENLINPASETN 1009 Query: 55 ----KIKALEVII------EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTL 94 ++ ++ K + +++ + + Sbjct: 1010 DQIWRVAGKFELLDKVLPKFKNSGHRVLIFFQMTQIMDIMEDFLRLRGMKYMRLDGSTKA 1069 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1070 DDRTGLLKLFNAPNSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 1123 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++++E++L+R K I ++ A K Sbjct: 1124 QDRAHRIGQKNEVRILRLITEDSVEEMILERAHAKLEIDGKVIQAGK 1170 >gi|74008355|ref|XP_865346.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 6 [Canis familiaris] Length = 1052 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 407 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 466 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 467 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 526 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 527 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 581 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 582 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 633 >gi|326925324|ref|XP_003208867.1| PREDICTED: DNA repair and recombination protein RAD54-like [Meleagris gallopavo] Length = 792 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 81/234 (34%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y F ++ +L+ I + S +L N ++ +E Sbjct: 470 ELYKNFLKQAKPVEELKEGKINVSS-LSSITSLKKLCNHPALIYDKCVEEEEGFMGALDL 528 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ + + +++ ++ L +K Sbjct: 529 FPAGYSTKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRNRRYLY 588 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 589 VRLDGTMSIKKRAKVVERFNSPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 647 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 648 -----DEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDE 696 >gi|46125857|ref|XP_387482.1| hypothetical protein FG07306.1 [Gibberella zeae PH-1] Length = 1427 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 80/225 (35%), Gaps = 33/225 (14%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------- 51 K Y + D +G A ++ ++ +L N +D ++ Sbjct: 802 KLYKQMVTHNKLVVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDVVENVMNPLNISNDL 861 Query: 52 ---HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K +++ + + + ++ R + Sbjct: 862 LWRTSGKFELLDRILPKYQATGHRVLMFFQMTAIMDIMEDYLRYRRVEYLRLDGTTKSDE 921 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 922 RSDLLREFNAPDSKYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 975 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R R K + ++ A + Sbjct: 976 RAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGR 1020 >gi|73977788|ref|XP_867147.1| PREDICTED: similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)... isoform 5 [Canis familiaris] Length = 1056 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 85/235 (36%), Gaps = 40/235 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++ + R + G + V V+ I NT++E +++R K + +++ + + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGEAK 638 >gi|118094595|ref|XP_422447.2| PREDICTED: similar to putative recombination factor GdRad54 [Gallus gallus] Length = 804 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 81/234 (34%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y F ++ +L+ I + S +L N ++ +E Sbjct: 482 ELYKNFLKQAKPVEELKEGKINVSS-LSSITSLKKLCNHPALIYDKCVEEEEGFMGALDL 540 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ + + +++ ++ L +K Sbjct: 541 FPAGYSTKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRNRRYLY 600 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 601 VRLDGTMSIKKRAKVVERFNSPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 659 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 660 -----DEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDE 708 >gi|91214213|ref|NP_919000.2| helicase [Burkholderia phage BcepNazgul] gi|88604906|gb|AAQ63367.2| helicase [Burkholderia phage BcepNazgul] Length = 522 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 116/199 (58%), Gaps = 7/199 (3%) Query: 3 QYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y KF+R+ DL IEA +A+ K LQLA+G VY E+K VHD KI+ L Sbjct: 308 MYKKFERDFILDLPDGTEIEAETAAALNQKLLQLASGCVYDAEKKTHW-VHDHKIEDLTQ 366 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E+ N P++VAY F S L RL+KAFP+ R +D + + +WN+GKI +L HPAS H Sbjct: 367 LVEELNGEPLLVAYWFKSSLERLKKAFPRARVMDAEGKLVGDWNKGKIKILLVHPASVAH 426 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q GG+ L + +++ LE + Q+I R+ + G + V V++ T+D++ + Sbjct: 427 GLNMQKGGHHLYIYDIFYSLELYLQLIGRLA-----RQGQRHVVRVHHATMIGTVDDVAV 481 Query: 182 QRLRTKSTIQDLLLNALKK 200 L K QD L L++ Sbjct: 482 SSLTRKRNAQDDLFVRLRR 500 >gi|149060085|gb|EDM10901.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 (predicted) [Rattus norvegicus] Length = 985 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 86/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 340 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 399 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 400 PPYTTDEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 459 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 460 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 514 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 515 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 566 >gi|312220846|emb|CBY00787.1| similar to SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Leptosphaeria maculans] Length = 1416 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + R + D +G ++ ++ +L N ++E + Sbjct: 807 KLYKQLVTHNRFMVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEEVEEVMNPTKSTNDL 866 Query: 55 ------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K +++ + + ++ Sbjct: 867 LWRSAGKFELLDRILPKFQATGHRVLMFFQMTQIMNIMEDYLRLRGMQYLRLDGATKADD 926 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N P + G GLNLQ + ++ + W+ + + Sbjct: 927 RSELLKLFNAPDSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 980 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R K + ++ A K Sbjct: 981 RAHRIGQKNEVRILRLITSNSVEEKILERANYKLDMDGKVIQAGK 1025 >gi|73997935|ref|XP_534944.2| PREDICTED: similar to DNA excision repair protein ERCC-6 (Cockayne syndrome protein CSB) [Canis familiaris] Length = 1486 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 75/229 (32%), Gaps = 39/229 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------------DEE 45 K Y F +E+Y L G+ S V ++ N + +E+ Sbjct: 770 KVYQNFIDSKEVYRILNGD----MQIFSGLVALRKICNHPDLFSGGPKNLKTIPDDDEED 825 Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGRT 93 + K+ +E ++ +++ L L+ Sbjct: 826 QFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTA 885 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I +N + I + G G+NL G N ++ + W+ + Sbjct: 886 IASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLT-GANRVIIYDPDWNPST-----DTQA 939 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 940 RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 988 >gi|110801800|ref|YP_698913.1| Snf2/Rad54 family helicase [Clostridium perfringens SM101] gi|110682301|gb|ABG85671.1| helicase, SNF2/RAD54 family [Clostridium perfringens SM101] Length = 1084 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 74/204 (36%), Gaps = 24/204 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 +++ + IE S K QLA + + KI+AL I+ + Sbjct: 868 KKQDAEEFNKSKIE---ILSYITKLRQLALDPSVTINDYMGE---SAKIEALVEILNQGI 921 Query: 66 ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I+V F S L + K + E+NEG+ + Sbjct: 922 EEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLIS 981 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL +I++ F WW+ +E R + G K V V LIA+ T Sbjct: 982 LKAGGTGLNLTS-ADIVIHFDPWWNPA-----VENQATDRAHRMGQKNVVEVIKLIAKGT 1035 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E V+ K + ++ + Sbjct: 1036 IEEKVVALQEEKKELISKIIEEGE 1059 >gi|164419749|ref|NP_620604.2| probable global transcription activator SNF2L1 isoform b [Homo sapiens] gi|57208176|emb|CAI42682.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] gi|57208837|emb|CAI42612.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] Length = 1042 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|74008375|ref|XP_865514.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 15 [Canis familiaris] Length = 1040 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|110800752|ref|YP_696312.1| Snf2/Rad54 family helicase [Clostridium perfringens ATCC 13124] gi|110675399|gb|ABG84386.1| helicase, SNF2/RAD54 family [Clostridium perfringens ATCC 13124] Length = 1084 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 74/204 (36%), Gaps = 24/204 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 +++ + IE S K QLA + + KI+AL I+ + Sbjct: 868 KKQDAEEFNKSKIE---ILSYITKLRQLALDPAVTINDYMGE---SAKIEALVEILNQGI 921 Query: 66 ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I+V F S L + K + E+NEG+ + Sbjct: 922 EEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLIS 981 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL +I++ F WW+ +E R + G K V V LIA+ T Sbjct: 982 LKAGGTGLNLTS-ADIVIHFDPWWNPA-----VENQATDRAHRMGQKNVVEVIKLIAKGT 1035 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E V+ K + ++ + Sbjct: 1036 IEEKVVALQEEKKELISKIIEEGE 1059 >gi|312130874|ref|YP_003998214.1| snf2-related protein [Leadbetterella byssophila DSM 17132] gi|311907420|gb|ADQ17861.1| SNF2-related protein [Leadbetterella byssophila DSM 17132] Length = 962 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 69/206 (33%), Gaps = 21/206 (10%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + L + Q K Q+AN K + Sbjct: 746 KLYDETKSYLRNQIMQEAGKPGMLVLQGLSKLRQIANHPAMVLPHYS---GGSGKGIDIL 802 Query: 61 VIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKI 109 I++ + + ++ F L + + G T ++ + N + Sbjct: 803 SRIKEVVSEGSKTLIFSQFVKHLKFVAEGLRAEKIPYLYLDGSTKNRMELVNRFQNSAEE 862 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + WW+ IE V R + G + VF Y Sbjct: 863 LIFLISLKAGGVGLNLTA-AENVFLLDPWWNPA-----IEAQAVDRAHRIGQTKTVFSYK 916 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I QNTI+E +++ TK + D L+ Sbjct: 917 FITQNTIEEKIVELQNTKRQLFDELI 942 >gi|253700371|ref|YP_003021560.1| SNF2-related protein [Geobacter sp. M21] gi|251775221|gb|ACT17802.1| SNF2-related protein [Geobacter sp. M21] Length = 1120 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 71/191 (37%), Gaps = 22/191 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 + + +K Q+ + + KI L +++ A ++V F S L Sbjct: 925 ALTAILKLRQICLSSKLILPQA---PDRSPKIDFLVDQLQELFAEGHSVLVFSQFTSFLD 981 Query: 83 RLQKAFPQG----------RTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNI 131 +++ Q + + +Q + E P + + G GLNL + Sbjct: 982 IVEQGLSQHGIGFSRLDGSTPVSRRKEMVQRFQESAEPGVFLLSLKAGGRGLNLTR-ASY 1040 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW+ +E R + G +R V + L+ +++I+E +++ + K + Sbjct: 1041 VFHLDPWWNPA-----VESQASDRAHRIGQQRQVTITRLLMRHSIEEKMMELKKRKLKLY 1095 Query: 192 DLLLNALKKET 202 LL + E Sbjct: 1096 RALLEEAEHEG 1106 >gi|119632239|gb|EAX11834.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_b [Homo sapiens] Length = 1029 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 384 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 443 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 444 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 503 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 504 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 558 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 559 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 610 >gi|207343880|gb|EDZ71203.1| YJR035Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1046 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 60/211 (28%), Gaps = 29/211 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGA--------VYYDEEKHWKEVHDEKIKALEVIIEK 65 DL N ++ N + + K ++ +++ Sbjct: 566 DLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDPKRSGKMQVVKQLLLLWH 625 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL---------------DKDPCTIQEWNEGKIP 110 ++ L L++ + +N Sbjct: 626 KQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFD 685 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G N ++ F W+ R + G KR V +Y L Sbjct: 686 VFLLTTRVGGLGVNLT-GANRIIIFDPDWNPSTDM-----QARERAWRIGQKREVSIYRL 739 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +I+E + R K + + +L K++ Sbjct: 740 MVGGSIEEKIYHRQIFKQFLTNRILTDPKQK 770 >gi|67923123|ref|ZP_00516613.1| SNF2-related:Helicase, C-terminal [Crocosphaera watsonii WH 8501] gi|67855021|gb|EAM50290.1| SNF2-related:Helicase, C-terminal [Crocosphaera watsonii WH 8501] Length = 1046 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 68/217 (31%), Gaps = 24/217 (11%) Query: 2 KQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEK---HWKEVHDEKI 56 K Y + ++ + S +K Q+ N ++ ++K ++ Sbjct: 811 KLYQQLVDNSLVAIEEKTGIERKGLILSLLLKLKQICNHPAHFLKQKSLKTAEQSGKLLR 870 Query: 57 KALEVIIEKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ F+ + + I + Sbjct: 871 LEEMLEELIEEGDHALIFTQFSEWGKLLQPYLQKKFQQDVLFLYGATRRVQRQEMIDRFQ 930 Query: 106 EGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL N + WW+ +E R + G KR Sbjct: 931 QDPNGPRIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPA-----VENQATDRAFRLGQKR 984 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ + T++E + + L +K + + ++A ++ Sbjct: 985 NVQVHKFVCTGTLEEKINEMLESKQKLAEQTVDAGEQ 1021 >gi|550429|emb|CAA57290.1| RAD26 [Saccharomyces cerevisiae] Length = 1085 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 60/211 (28%), Gaps = 29/211 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGA--------VYYDEEKHWKEVHDEKIKALEVIIEK 65 DL N ++ N + + K ++ +++ Sbjct: 605 DLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDPKRSGKMQVVKQLLLLWH 664 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL---------------DKDPCTIQEWNEGKIP 110 ++ L L++ + +N Sbjct: 665 KQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFD 724 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G N ++ F W+ R + G KR V +Y L Sbjct: 725 VFLLTTRVGGLGVNLT-GANRIIIFDPDWNPSTDM-----QARERAWRIGQKREVSIYRL 778 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +I+E + R K + + +L K++ Sbjct: 779 MVGGSIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|6322495|ref|NP_012569.1| Rad26p [Saccharomyces cerevisiae S288c] gi|730465|sp|P40352|RAD26_YEAST RecName: Full=DNA repair and recombination protein RAD26; AltName: Full=ATP-dependent helicase RAD26 gi|506419|gb|AAA34655.1| gtA1085 [Saccharomyces cerevisiae] gi|1015683|emb|CAA89562.1| RAD26 [Saccharomyces cerevisiae] gi|285812926|tpg|DAA08824.1| TPA: Rad26p [Saccharomyces cerevisiae S288c] Length = 1085 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 60/211 (28%), Gaps = 29/211 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGA--------VYYDEEKHWKEVHDEKIKALEVIIEK 65 DL N ++ N + + K ++ +++ Sbjct: 605 DLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDPKRSGKMQVVKQLLLLWH 664 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL---------------DKDPCTIQEWNEGKIP 110 ++ L L++ + +N Sbjct: 665 KQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFD 724 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G N ++ F W+ R + G KR V +Y L Sbjct: 725 VFLLTTRVGGLGVNLT-GANRIIIFDPDWNPSTDM-----QARERAWRIGQKREVSIYRL 778 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +I+E + R K + + +L K++ Sbjct: 779 MVGGSIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|168217982|ref|ZP_02643607.1| helicase, SNF2/RAD54 family [Clostridium perfringens NCTC 8239] gi|182379962|gb|EDT77441.1| helicase, SNF2/RAD54 family [Clostridium perfringens NCTC 8239] Length = 1084 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 74/204 (36%), Gaps = 24/204 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 +++ + IE S K QLA + + KI+AL I+ + Sbjct: 868 KKQDAEEFNKSKIE---ILSYITKLRQLALDPSVTINDYMGE---SAKIEALVEILNQGI 921 Query: 66 ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I+V F S L + K + E+NEG+ + Sbjct: 922 EEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLIS 981 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL +I++ F WW+ +E R + G K V V LIA+ T Sbjct: 982 LKAGGTGLNLTS-ADIVIHFDPWWNPA-----VENQATDRAHRMGQKNVVEVIKLIAKGT 1035 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E V+ K + ++ + Sbjct: 1036 IEEKVVALQEEKKELISKIIEEGE 1059 >gi|168209303|ref|ZP_02634928.1| helicase, SNF2/RAD54 family [Clostridium perfringens B str. ATCC 3626] gi|170712526|gb|EDT24708.1| helicase, SNF2/RAD54 family [Clostridium perfringens B str. ATCC 3626] Length = 1084 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 74/204 (36%), Gaps = 24/204 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 +++ + IE S K QLA + + KI+AL I+ + Sbjct: 868 KKQDAEEFNKSKIE---ILSYITKLRQLALDPAVTINDYMGE---SAKIEALVEILNQGI 921 Query: 66 ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I+V F S L + K + E+NEG+ + Sbjct: 922 EEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLIS 981 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL +I++ F WW+ +E R + G K V V LIA+ T Sbjct: 982 LKAGGTGLNLTS-ADIVIHFDPWWNPA-----VENQATDRAHRMGQKNVVEVIKLIAKGT 1035 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E V+ K + ++ + Sbjct: 1036 IEEKVVALQEEKKELISKIIEEGE 1059 >gi|326430759|gb|EGD76329.1| hypothetical protein PTSG_01031 [Salpingoeca sp. ATCC 50818] Length = 752 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 70/238 (29%), Gaps = 49/238 (20%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK----- 55 M+ Y + + + + + +L N ++ K +K Sbjct: 401 MEMYKAMLGAKMKR-KDGTVTGSS-LAFITELKKLCNHPQLLHDKIAGKGKTKDKAFGAL 458 Query: 56 ------------------------IKALEVIIEKANAAPIIVAYHFNSDLARL------- 84 + L I+ I++ ++ L Sbjct: 459 DPFLPQLKPSMQRLQPQLSGKLAVLDCLLATIKMQTTDKIVLVSNYTQTLELFTTLCALR 518 Query: 85 ---QKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 T+ + + +N+ + + G GLNL G N LV F W Sbjct: 519 GYQYVRLDGSMTIKRRQKIVDRFNDPTSSDFIFMLSSKAGGCGLNL-IGANRLVMFDPDW 577 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G + FVY + TI+E +LQR K + +++ Sbjct: 578 NPAN-----DEQAMARVWRDGQTKLCFVYRFVTTGTIEEKILQRQAHKKALSQCVVDD 630 >gi|223933727|ref|ZP_03625701.1| Non-specific serine/threonine protein kinase [Streptococcus suis 89/1591] gi|223897608|gb|EEF63995.1| Non-specific serine/threonine protein kinase [Streptococcus suis 89/1591] Length = 1030 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 20/209 (9%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + I S + Q+ + + EE + +K L + Sbjct: 815 QQMRTQ-IAGADDAQINRSKIEILSGITRLRQICDTPSLFMEEFSGESGKLNSLKELLLQ 873 Query: 63 IEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 +++ +++ F + L ++ Q +N G Sbjct: 874 LKEGEH-RVLIFSQFRNMLEKIEEQLVEIGMTSYTLTGSTPANQRQEMTQAFNAGSRDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ LWW+ +E ++R + G V Y LI Sbjct: 933 LISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAISRAHRMGQTEKVECYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + K + +L+ + Sbjct: 987 RGTIEEKIQELQENKKNLVKTVLDGNESR 1015 >gi|326924536|ref|XP_003208483.1| PREDICTED: probable global transcription activator SNF2L1-like [Meleagris gallopavo] Length = 1043 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 398 VKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 457 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 458 PPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRL 517 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 518 DGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 572 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 573 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 624 >gi|74008371|ref|XP_865480.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 13 [Canis familiaris] Length = 1062 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|184201460|ref|YP_001855667.1| SNF2 family helicase [Kocuria rhizophila DC2201] gi|183581690|dbj|BAG30161.1| putative helicase [Kocuria rhizophila DC2201] Length = 925 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 23/209 (11%) Query: 3 QYHK-FQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + QRE L + F LA D E K+ A Sbjct: 707 AYDRRLQRERAKILGLLRDFDKNRFTIFQSLTTLRMLALDPALVDPESTAA---SSKLDA 763 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGK 108 L + + +V F S L + + + ++ + G+ Sbjct: 764 LFEQLPQLLQEGHRPLVFSQFTSFLKIVARRLDEAGIAYAYLDGSTKDRAAALKTFRSGR 823 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P+ + G G+NL + WW+ E V R + G R V VY Sbjct: 824 APVFLVSLKAGGFGINLTE-ADYCYLLDPWWNPAA-----ENQAVDRTHRIGQTRKVMVY 877 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++AQ+TI+E V++ K+ + +L+ Sbjct: 878 RMVAQDTIEEKVMELKARKAELFSAVLDD 906 >gi|18310607|ref|NP_562541.1| helicase, SNF2/RAD54 family [Clostridium perfringens str. 13] gi|18145288|dbj|BAB81331.1| SWI/SNF family helicase [Clostridium perfringens str. 13] Length = 1084 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 74/204 (36%), Gaps = 24/204 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 +++ + IE S K QLA + + KI+AL I+ + Sbjct: 868 KKQDAEEFNKSKIE---ILSYITKLRQLALDPSVTINDYMGE---SAKIEALVEILNQGV 921 Query: 66 ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I+V F S L + K + E+NEG+ + Sbjct: 922 EEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLIS 981 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL +I++ F WW+ +E R + G K V V LIA+ T Sbjct: 982 LKAGGTGLNLTS-ADIVIHFDPWWNPA-----VENQATDRAHRMGQKNVVEVIKLIAKGT 1035 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E V+ K + ++ + Sbjct: 1036 IEEKVVALQEEKKELISKIIEEGE 1059 >gi|302024348|ref|ZP_07249559.1| SNF2 family DNA/RNA helicase [Streptococcus suis 05HAS68] gi|330833343|ref|YP_004402168.1| Non-specific serine/threonine protein kinase [Streptococcus suis ST3] gi|329307566|gb|AEB81982.1| Non-specific serine/threonine protein kinase [Streptococcus suis ST3] Length = 1030 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 20/209 (9%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + I S + Q+ + + EE + +K L + Sbjct: 815 QQMRTQ-IAGADDAQINRSKIEILSGITRLRQICDTPSLFMEEFSGESGKLNSLKELLLQ 873 Query: 63 IEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 +++ +++ F + L ++ Q +N G Sbjct: 874 LKEGEH-RVLIFSQFRNMLEKIEEQLVEIGMTSYTLTGSTPANQRQEMTQAFNAGSRDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ LWW+ +E ++R + G V Y LI Sbjct: 933 LISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAISRAHRMGQTEKVECYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + K + +L+ + Sbjct: 987 RGTIEEKIQELQENKKNLVKTVLDGNESR 1015 >gi|260790077|ref|XP_002590070.1| hypothetical protein BRAFLDRAFT_123437 [Branchiostoma floridae] gi|229275258|gb|EEN46081.1| hypothetical protein BRAFLDRAFT_123437 [Branchiostoma floridae] Length = 1878 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 66/161 (40%), Gaps = 19/161 (11%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDP 98 K+ AL++++ K +++ + L++ + D+ Sbjct: 1417 DSGKLYALDILLTRLKQQGHRVLIYSQMTRMIDILEEFMWHRKHTYMRLDGSSKISDRRD 1476 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + + G G+NL + ++F+ W+ +++ + R + Sbjct: 1477 MVEDFQQRSDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHR 1530 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V VY LI + TI+E +LQR R KS IQ ++++ K Sbjct: 1531 LGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGK 1571 >gi|299471324|emb|CBN79280.1| CHROMODOMAIN HELICASE DNA BINDING [Ectocarpus siliculosus] Length = 2463 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 25/231 (10%), Positives = 67/231 (29%), Gaps = 37/231 (16%) Query: 2 KQYHKFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------------E 44 + Y + + + + + ++ + N E Sbjct: 1081 QYYRAIYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITGVEDAVRVQMGDSGE 1140 Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 +K H K+ L+ ++ K +++ F L L+ Sbjct: 1141 DKEHLVKHSGKLVLLDKLLPRLKQQGHRVLLFSQFKIMLNILEDYLIASGIPYGRIDGSI 1200 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I + ++ + G G+ L + + + W+ + + Sbjct: 1201 QGNLRQKAIDSFQAPDSDMFVMLLSTKAGGVGITLTA-ADTCIIYDSDWNPQN-----DV 1254 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G ++V VY L+ T + + + K + +L++ + + Sbjct: 1255 QAQARCHRIGQTKSVKVYRLLVAKTYEMHMFKTASKKLGLDQAVLSSSRPQ 1305 >gi|172040368|ref|YP_001800082.1| putative DNA/RNA helicase [Corynebacterium urealyticum DSM 7109] gi|171851672|emb|CAQ04648.1| putative DNA/RNA helicase [Corynebacterium urealyticum DSM 7109] Length = 1059 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 75/217 (34%), Gaps = 25/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYDEEKHWK----EVHDEKIK 57 Y + ++ L+ + + VK Q+ N ++ + + KI+ Sbjct: 803 LYQAYIAQVEEALEQGSASRRGLILASLVKIKQICNHPAHFAGDGSGILRGGKHRSPKIE 862 Query: 58 ALEVIIEKA--NAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQEW 104 + +I +A +++ F ++ + + + ++ Sbjct: 863 RIVELIGQAVAEGKKVLLFTQFPSFGRMLAPAIEAEYGMPVLQLDGAVSRSRRTELVAQF 922 Query: 105 NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 P ++ + G G+ L ++++ WW+ +E R + G ++ Sbjct: 923 QRDSGPGVMLLSVRAGGTGITLTR-ASVVIHIDRWWNPA-----VEDQATDRAYRIGQEQ 976 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V VY ++ T+DE + + + K + ++ + Sbjct: 977 DVDVYKFVSAGTLDERIHEIITGKRELAGTVVGEGEG 1013 >gi|327539289|gb|EGF25911.1| Non-specific serine/threonine protein kinase [Rhodopirellula baltica WH47] Length = 647 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 77/203 (37%), Gaps = 23/203 (11%) Query: 4 YHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y ++E L+ E++ + ++ Q+ N + ++++A Sbjct: 410 YETAEKEGVVHLEELEESLTVQHVFELVLRLKQICN-----FDPVTNSSAKLQRLEADME 464 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTIQEW-NEGKIPLL 112 + A+ I+ + + +++ + K I+++ N+ ++ Sbjct: 465 EV-AASGQKAILFSQWTKTIDKMRPTLERFGPLEYHGKIPHKKREGVIEQFKNDPNSHII 523 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + GLNLQ+ + F WW+ IE + R + G +V V ++A Sbjct: 524 LMSYGAGSVGLNLQF-CRYVFLFDRWWNPA-----IEDQAINRAHRIGAAGSVTVSRMMA 577 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 NTI++ + L K + D+L Sbjct: 578 VNTIEQRIAAVLDQKREMFDMLF 600 >gi|32477129|ref|NP_870123.1| SWF/SNF family helicase [Rhodopirellula baltica SH 1] gi|32447677|emb|CAD79278.1| swi/snf family helicase_2 [Rhodopirellula baltica SH 1] Length = 647 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 77/203 (37%), Gaps = 23/203 (11%) Query: 4 YHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y ++E L+ E++ + ++ Q+ N + ++++A Sbjct: 410 YETAEKEGVVHLEELEESLTVQHVFELVLRLKQICN-----FDPVTNSSAKLQRLEADME 464 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTIQEW-NEGKIPLL 112 + A+ I+ + + +++ + K I+++ N+ ++ Sbjct: 465 EV-AASGQKAILFSQWTKTIDKMRPTLERFGPLEYHGKIPHKKREGVIEQFKNDPNSHII 523 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + GLNLQ+ + F WW+ IE + R + G +V V ++A Sbjct: 524 LMSYGAGSVGLNLQF-CRYVFLFDRWWNPA-----IEDQAINRAHRIGAAGSVTVSRMMA 577 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 NTI++ + L K + D+L Sbjct: 578 VNTIEQRIAAVLDQKREMFDMLF 600 >gi|300855333|ref|YP_003780317.1| putative SNF2 family helicase [Clostridium ljungdahlii DSM 13528] gi|300435448|gb|ADK15215.1| predicted SNF2 family helicase [Clostridium ljungdahlii DSM 13528] Length = 1080 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + ++ + S K QL + + K Sbjct: 853 KVYKTYADHAVDLIEKKVKEDEFKNSKIEILSYITKLRQLCLDPSILI---NNYSGGNGK 909 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQE 103 + AL ++ K+ I+V F S L L++ +++ Sbjct: 910 MDALVELLHKSIAQGHRILVFSQFTSVLKNIGEKISGEKIPFSYLDGTIKLEERINIVKK 969 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+GK + + G GLNL ++++ F WW+ +E R + G K Sbjct: 970 FNKGKNSVFLISLKAGGTGLNLTS-ADVVIHFDPWWNTA-----VEEQAADRTHRIGQKN 1023 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V +IA+ TI+E ++ K + + L+ Sbjct: 1024 VVEVIKIIAKGTIEEKIVLLQNEKKKLIEKLME 1056 >gi|296478735|gb|DAA20850.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 [Bos taurus] Length = 1052 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|321263831|ref|XP_003196633.1| chromatin structure remodeling complex protein STH1 [Cryptococcus gattii WM276] gi|317463110|gb|ADV24846.1| Chromatin structure remodeling complex protein STH1, putative [Cryptococcus gattii WM276] Length = 1430 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 K Y Q+ + + N + ++ ++ N + E V + Sbjct: 819 KLYESVQKYKTLPTDMSVAKPQKRQNLQNALMQLRKICNHPYVFREVDEDFTVGNTTDEQ 878 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDK 96 K + L+ I+ K +++ + + + Sbjct: 879 IIRVAGKFELLDRILPKLFKTGHKVLIFFQMTEIMTIVSDFFDYRGWKYCRLDGSTKAED 938 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N+ P + + G GLNLQ + ++ + W+ + Sbjct: 939 RQTLLSTFNDPNSPYQVFILSTRAGGLGLNLQS-ADTVIIYDTDWNP-----HADLQAQD 992 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI+ T++ELVL R + K I ++ A K Sbjct: 993 RAHRIGQKKEVRVLRLISSGTVEELVLARAQRKLEIDGKVIQAGK 1037 >gi|168207158|ref|ZP_02633163.1| helicase, SNF2/RAD54 family [Clostridium perfringens E str. JGS1987] gi|170661452|gb|EDT14135.1| helicase, SNF2/RAD54 family [Clostridium perfringens E str. JGS1987] Length = 1084 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 74/204 (36%), Gaps = 24/204 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 +++ + IE S K QLA + + KI+AL I+ + Sbjct: 868 KKQDAEEFNKSKIE---ILSYITKLRQLALDPSVTINDYMGE---SAKIEALVEILNQGI 921 Query: 66 ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I+V F S L + K + E+NEG+ + Sbjct: 922 EEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLIS 981 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL +I++ F WW+ +E R + G K V V LIA+ T Sbjct: 982 LKAGGTGLNLTS-ADIVIHFDPWWNPA-----VENQATDRAHRMGQKNVVEVIKLIAKGT 1035 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E V+ K + ++ + Sbjct: 1036 IEEKVVALQEEKKELISKIIEEGE 1059 >gi|157427958|ref|NP_001098886.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Bos taurus] gi|157279332|gb|AAI53226.1| SMARCA5 protein [Bos taurus] Length = 1052 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|151945105|gb|EDN63356.1| DNA dependent ATPase [Saccharomyces cerevisiae YJM789] Length = 1085 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 60/211 (28%), Gaps = 29/211 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGA--------VYYDEEKHWKEVHDEKIKALEVIIEK 65 DL N ++ N + + K ++ +++ Sbjct: 605 DLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDPKRSGKMQVVKQLLLLWH 664 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL---------------DKDPCTIQEWNEGKIP 110 ++ L L++ + +N Sbjct: 665 KQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFD 724 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G N ++ F W+ R + G KR V +Y L Sbjct: 725 VFLLTTRVGGLGVNLT-GANRIIIFDPDWNPSTDM-----QARERAWRIGQKREVSIYRL 778 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +I+E + R K + + +L K++ Sbjct: 779 MVGGSIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|74008381|ref|XP_865569.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 18 [Canis familiaris] Length = 1048 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|259147500|emb|CAY80752.1| Rad26p [Saccharomyces cerevisiae EC1118] Length = 1085 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 60/211 (28%), Gaps = 29/211 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGA--------VYYDEEKHWKEVHDEKIKALEVIIEK 65 DL N ++ N + + K ++ +++ Sbjct: 605 DLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDPKRSGKMQVVKQLLLLWH 664 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL---------------DKDPCTIQEWNEGKIP 110 ++ L L++ + +N Sbjct: 665 KQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFD 724 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G N ++ F W+ R + G KR V +Y L Sbjct: 725 VFLLTTRVGGLGVNLT-GANRIIIFDPDWNPSTDM-----QARERAWRIGQKREVSIYRL 778 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +I+E + R K + + +L K++ Sbjct: 779 MVGGSIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|190409514|gb|EDV12779.1| DNA dependent ATPase [Saccharomyces cerevisiae RM11-1a] Length = 1085 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 60/211 (28%), Gaps = 29/211 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGA--------VYYDEEKHWKEVHDEKIKALEVIIEK 65 DL N ++ N + + K ++ +++ Sbjct: 605 DLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDPKRSGKMQVVKQLLLLWH 664 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL---------------DKDPCTIQEWNEGKIP 110 ++ L L++ + +N Sbjct: 665 KQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFD 724 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G N ++ F W+ R + G KR V +Y L Sbjct: 725 VFLLTTRVGGLGVNLT-GANRIIIFDPDWNPSTDM-----QARERAWRIGQKREVSIYRL 778 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +I+E + R K + + +L K++ Sbjct: 779 MVGGSIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|256270798|gb|EEU05949.1| Rad26p [Saccharomyces cerevisiae JAY291] Length = 1085 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 60/211 (28%), Gaps = 29/211 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGA--------VYYDEEKHWKEVHDEKIKALEVIIEK 65 DL N ++ N + + K ++ +++ Sbjct: 605 DLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDPKRSGKMQVVKQLLLLWH 664 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL---------------DKDPCTIQEWNEGKIP 110 ++ L L++ + +N Sbjct: 665 KQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFD 724 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G N ++ F W+ R + G KR V +Y L Sbjct: 725 VFLLTTRVGGLGVNLT-GANRIIIFDPDWNPSTDM-----QARERAWRIGQKREVSIYRL 778 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +I+E + R K + + +L K++ Sbjct: 779 MVGGSIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|301766464|ref|XP_002918637.1| PREDICTED: probable global transcription activator SNF2L1-like isoform 2 [Ailuropoda melanoleuca] Length = 1042 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNVPNSNKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|74008379|ref|XP_865551.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 17 [Canis familiaris] Length = 1063 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|74008367|ref|XP_865444.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 11 [Canis familiaris] Length = 1068 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|74008377|ref|XP_865534.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 16 [Canis familiaris] Length = 1052 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|108762463|ref|YP_629793.1| SNF2/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108466343|gb|ABF91528.1| SNF2/helicase domain protein [Myxococcus xanthus DK 1622] Length = 1208 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 74/213 (34%), Gaps = 27/213 (12%) Query: 3 QYHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + DL+ E + + LA+ YD ++ K+ Sbjct: 972 LYEDARLAALSDLETRKPKMKEQERRIEILAALTRLRLLASHPRLYD---AGSKLESAKL 1028 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEW 104 + ++ + A +V F S LA +++ + ++ + Sbjct: 1029 ERFMELVRELRAEGHRALVFSQFTSHLALVREVLDAEGIDYEYLDGQTPAGARAERVRAF 1088 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 EG +PL + G GLNL ++ WW+ +E R + G +R Sbjct: 1089 QEGDVPLFLISLKAGGFGLNLTA-ATTVIHLDPWWNPA-----VEDQASDRAHRIGQERP 1142 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L+ + TI+E +L K + +L Sbjct: 1143 VTVYRLVTRGTIEEQMLSLHEHKRALVAGVLEG 1175 >gi|74008369|ref|XP_865464.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 12 [Canis familiaris] Length = 1040 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|297836766|ref|XP_002886265.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297332105|gb|EFH62524.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 1181 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 25/189 (13%) Query: 32 CLQLANGAVYYDEEKHWKEVH------DEKIKALEVII--EKANAAPIIVAYHFNSDLAR 83 ++ N + E + K+K + ++ K +++ L Sbjct: 697 MRKICNHPDLLEREHSHQNPDYGNPERSGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDI 756 Query: 84 LQKAFPQGRTLDKDP----------CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNIL 132 L+ + I E+N + + G G NL G N + Sbjct: 757 LESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSDDVFVFVLTTKVGGLGTNLT-GANRV 815 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + F W+ R + G K+ V VY LI + TI+E V R K + + Sbjct: 816 IIFDPDWNPSNDM-----QARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTN 870 Query: 193 LLLNALKKE 201 +L ++ Sbjct: 871 KILKNPQQR 879 >gi|118581141|ref|YP_902391.1| SNF2-related protein [Pelobacter propionicus DSM 2379] gi|118503851|gb|ABL00334.1| SNF2-related protein [Pelobacter propionicus DSM 2379] Length = 1164 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 60/186 (32%), Gaps = 22/186 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 + + ++ Q+ K+ L + + ++V F S L Sbjct: 969 ALTALLRLRQICLAPSLALPGSSDS---SPKLDFLVEQLAELRDEGHSVLVFSQFTSYLD 1025 Query: 83 RLQKAFPQGR----------TLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNI 131 +++A + + +Q + P + + G GLNL Sbjct: 1026 MVEEALKRHHLPNLRLDGSTPTPQRKRLVQGFQHSDSPLVFLISLKAGGKGLNLTR-ATY 1084 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW+ +E R + G R V + LI ++TI+E ++ K + Sbjct: 1085 VYHLDPWWNPA-----VENQASDRAHRLGQTRQVTITRLIMRHTIEEKMMALKEQKQKLY 1139 Query: 192 DLLLNA 197 +L Sbjct: 1140 RAILEE 1145 >gi|74008373|ref|XP_865495.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 14 [Canis familiaris] Length = 1063 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 533 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 588 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 639 >gi|323347929|gb|EGA82189.1| Rad26p [Saccharomyces cerevisiae Lalvin QA23] Length = 1085 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 60/211 (28%), Gaps = 29/211 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGA--------VYYDEEKHWKEVHDEKIKALEVIIEK 65 DL N ++ N + + K ++ +++ Sbjct: 605 DLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDPKRSGKMQVVKQLLLLWH 664 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL---------------DKDPCTIQEWNEGKIP 110 ++ L L++ + +N Sbjct: 665 KQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFD 724 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G N ++ F W+ R + G KR V +Y L Sbjct: 725 VFLLTTRVGGLGVNLT-GANRIIIFDPDWNPSTDM-----QARERAWRIGQKREVSIYRL 778 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +I+E + R K + + +L K++ Sbjct: 779 MVGGSIEEKIYHRQIFKQFLTNRILTDPKQK 809 >gi|299115203|emb|CBN74034.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1524 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 25/231 (10%), Positives = 67/231 (29%), Gaps = 37/231 (16%) Query: 2 KQYHKFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------------- 44 + Y + + +A + + ++ + N Sbjct: 670 QYYRAIYDRNTTFLLQGKKQAKDAPSLMNLAMQLRKCCNHPFLITGVEDDVSQQLGGNKT 729 Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD------- 95 K H K+ L+ ++ K +++ F L L+ Sbjct: 730 SKEHLVKHSGKLVLLDKLLPRLKTQGHRVLLFSQFKIMLDILEDYLIASDISYGRIDGDI 789 Query: 96 ---KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I + ++ + G G+ L + + + W+ + + Sbjct: 790 QGRQRQKEIDSFQAPDSDMLVMLLSTRAGGVGITLTA-ADTCIIYDSDWNPQN-----DV 843 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G ++V VY L+ T + + + K + + +L+ + + Sbjct: 844 QAQARCHRIGQTKSVKVYRLLVAKTYETHMFKTASRKLGLDEAVLSGTRPQ 894 >gi|62088588|dbj|BAD92741.1| excision repair cross-complementing rodent repair deficiency, complementation group 6 variant [Homo sapiens] Length = 870 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 66/206 (32%), Gaps = 34/206 (16%) Query: 24 NSASKTVKCLQLANGAVYY---------------DEEKHWKEVHDEKIKALEVII--EKA 66 S + ++ N + +E++ K+ +E ++ Sbjct: 171 QIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEEDQFGYWKRSGKMIVVESLLKIWHK 230 Query: 67 NAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWN-EGKIPLLFAH 115 +++ L L+ T+ I +N + I + Sbjct: 231 QGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLT 290 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL G N +V + W+ + R + G K+ V VY L+ T Sbjct: 291 TRVGGLGVNLT-GANRVVIYDPDWNPST-----DTQARERAWRIGQKKQVTVYRLLTAGT 344 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKE 201 I+E + R K + + +L K+ Sbjct: 345 IEEKIYHRQIFKQFLTNRVLKDPKQR 370 >gi|118092751|ref|XP_421656.2| PREDICTED: similar to excision repair protein [Gallus gallus] Length = 1495 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 71/231 (30%), Gaps = 41/231 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 + Y F +E+Y L G+ S V ++ N + + Sbjct: 769 QVYQNFIDSKEVYQILNGD----MQVFSGLVALRKICNHPDLFSGGPKILKCVPDADLEE 824 Query: 51 -------VHDEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQG 91 K+ +E ++ ++ F D Sbjct: 825 ADQFGYWKRSGKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFLRDRNYSYLRMDGT 884 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T+ I +N + I + G G+NL G + ++ + W+ + Sbjct: 885 TTIASRQPLITRYNEDKSIFIFLLTTRVGGIGVNLT-GADRVIIYDPDWNPST-----DT 938 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 939 QARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 989 >gi|74008361|ref|XP_865393.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform b isoform 8 [Canis familiaris] Length = 998 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 353 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 412 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 413 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 472 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 473 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 527 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 528 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 579 >gi|269796289|ref|YP_003315744.1| DNA/RNA helicase [Sanguibacter keddieii DSM 10542] gi|269098474|gb|ACZ22910.1| DNA/RNA helicase, superfamily II, SNF2 family [Sanguibacter keddieii DSM 10542] Length = 1227 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 74/205 (36%), Gaps = 19/205 (9%) Query: 3 QYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + +R L E F Q + D ++V K++ L Sbjct: 1012 AYLQRERTKVLGLVDEFGEHRFEVFRSLTVLRQASLDVSLVD--AEHEKVPSSKLEVLYE 1069 Query: 62 IIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQEWNEGKIPL 111 +++ ++V F L R++ + + TI+ + G+ + Sbjct: 1070 MLDDILAEGHSVLVFSQFTQFLGRVRAHLDRKDVDYSYLDGRTRRRAETIERFTSGETKV 1129 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + + WW+ E V R + G R V VY ++ Sbjct: 1130 FLISLKAGGFGLNLTA-ADYCILLDPWWNPAA-----EAQAVDRAHRIGQTRNVNVYRMV 1183 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + +TI+E V+ +KS + +L+ Sbjct: 1184 STDTIEEKVMALKASKSKLFASVLD 1208 >gi|66813000|ref|XP_640679.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60468700|gb|EAL66702.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1655 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 78/221 (35%), Gaps = 33/221 (14%) Query: 8 QRELYCDLQGENIEAF-----NSASKTVKCLQLANGA-VYYDEEKHWKEVH-------DE 54 ++ L +I++ N+ ++ N + + + H Sbjct: 1054 EKLYLEFLDSNDIKSVLDGRRNALYGIDILKKICNHPDILHMDASDEDRPHDYGNIERSA 1113 Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTI 101 K+K +E I+ +++ L +++ + + C + Sbjct: 1114 KLKVVETILPLWFKQGDKVLLFCQTRQMLDIVEQYIRDSTQFNYLRMDGTTSIRQRQCLV 1173 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +++N + + + G GLNL G N ++ F W+ R + G Sbjct: 1174 EQFNIDPSLFIFLLTTKVGGLGLNLT-GANRVILFDPDWNPSTDM-----QARERVYRIG 1227 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K+AV +Y LI TI+E + R K + + +L +++ Sbjct: 1228 QKKAVTIYRLITLGTIEEKIYHRQIYKQFLTNKILKDPRQK 1268 >gi|253752403|ref|YP_003025544.1| putative helicase [Streptococcus suis SC84] gi|253754229|ref|YP_003027370.1| helicase [Streptococcus suis P1/7] gi|253756163|ref|YP_003029303.1| helicase [Streptococcus suis BM407] gi|251816692|emb|CAZ52333.1| putative helicase [Streptococcus suis SC84] gi|251818627|emb|CAZ56461.1| putative helicase [Streptococcus suis BM407] gi|251820475|emb|CAR47204.1| putative helicase [Streptococcus suis P1/7] gi|319758808|gb|ADV70750.1| SNF2 family DNA/RNA helicase [Streptococcus suis JS14] Length = 1030 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 20/209 (9%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + I S + Q+ + + EE + +K L + Sbjct: 815 QQMRTQ-IAGADDAQINRSKIEILSGITRLRQICDTPSLFMEEFSGESGKLNSLKELLLQ 873 Query: 63 IEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 +++ +++ F + L ++ Q +N G Sbjct: 874 LKEGEH-RVLIFSQFRNMLEKIEEQLIEIGMTSYTLTGSTPANQRQEMTQAFNAGSRDAF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ LWW+ +E ++R + G V Y LI Sbjct: 933 LISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAISRAHRMGQTEKVECYRLIT 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + K + +L+ + Sbjct: 987 RGTIEEKIQELQENKKNLVKTVLDGNESR 1015 >gi|182626118|ref|ZP_02953879.1| helicase, SNF2/RAD54 family [Clostridium perfringens D str. JGS1721] gi|177908639|gb|EDT71160.1| helicase, SNF2/RAD54 family [Clostridium perfringens D str. JGS1721] Length = 1084 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 74/204 (36%), Gaps = 24/204 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 +++ + IE S K QLA + + KI+AL I+ + Sbjct: 868 KKQDAEEFNKSKIE---ILSYITKLRQLALDPSVTINDYMGE---SAKIEALVEILNQGI 921 Query: 66 ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I+V F S L + K + E+NEG+ + Sbjct: 922 EEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLIS 981 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL +I++ F WW+ +E R + G K V V LIA+ T Sbjct: 982 LKAGGIGLNLTS-ADIVIHFDPWWNPA-----VENQATDRAHRMGQKNVVEVIKLIAKGT 1035 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E V+ K + ++ + Sbjct: 1036 IEEKVVALQEEKKELISKIIEEGE 1059 >gi|154312352|ref|XP_001555504.1| hypothetical protein BC1G_06209 [Botryotinia fuckeliana B05.10] gi|150850172|gb|EDN25365.1| hypothetical protein BC1G_06209 [Botryotinia fuckeliana B05.10] Length = 1096 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 66/191 (34%), Gaps = 27/191 (14%) Query: 32 CLQLANGAVYYDEEKHWKEV-------HDEKIKALEVII--EKANAAPIIVAYHFNSDLA 82 ++ N D+ K K++ ++ ++ K ++ L Sbjct: 635 LRKICNHPDLLDKRLKNKPDYKWGNGNKSGKMQVVKALLQMWKGYGHKTLLFSQGVQMLD 694 Query: 83 RLQKA-----------FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L++ G + + ++N + ++ + G G+NL G N Sbjct: 695 ILEEFVKKLGGFNYLRMDGGTAVKDRQTLVDQFNNDPEMHVFLLTTKVGGLGVNLT-GAN 753 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ F W+ + R + G K+ V +Y L+ TI+E + R K + Sbjct: 754 RVIIFDPDWNPST-----DVQARERAWRLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFL 808 Query: 191 QDLLLNALKKE 201 + +L K+ Sbjct: 809 TNKILKDPKQR 819 >gi|119632238|gb|EAX11833.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_a [Homo sapiens] Length = 946 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 335 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 394 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 395 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 454 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 455 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 509 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 510 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 561 >gi|127512820|ref|YP_001094017.1| SNF2-related protein [Shewanella loihica PV-4] gi|126638115|gb|ABO23758.1| SNF2-related protein [Shewanella loihica PV-4] Length = 1161 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 74/239 (30%), Gaps = 53/239 (22%) Query: 3 QYHKFQR------ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------- 43 Y + +L G ++ +K Q+ + Sbjct: 901 LYETIRLTVAEQVQLALRQTGAKANRLMISNALLKLRQVCCHPAMLNLGQLGQVGETENS 960 Query: 44 ------------------EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR 83 + K+ LE + + I++ F S L Sbjct: 961 KVAISPEVNLSQSVTGLDGAQDELNAESSKLAWLENKLPSMIEDGRNILIFSSFTSMLDL 1020 Query: 84 LQKAFPQGRTLDK--------DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + + + + I+ + G++ + + G GLNL ++++ Sbjct: 1021 IAEQLERQQIGYEMLTGRSRHRDRIIERFRRGEVNVFLISLKAGGSGLNLTE-ADVVIHV 1079 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ E R + G + VFVY LI QNT++E + Q ++K + + Sbjct: 1080 DPWWNPAA-----EEQASDRAYRIGQDKPVFVYKLICQNTVEERIQQLQQSKQALAQSM 1133 >gi|326434134|gb|EGD79704.1| hypothetical protein PTSG_10689 [Salpingoeca sp. ATCC 50818] Length = 1641 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 69/223 (30%), Gaps = 33/223 (14%) Query: 3 QYHKFQREL-YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 Y F ++ + AF+ ++ N + Sbjct: 952 LYEHFLASRDVGEILRGELTAFHGIDL---LRKICNHPDLAPSLADPPDYSDPSVPLPWE 1008 Query: 53 -DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPC 99 K+ L ++ +++ L L+ + Sbjct: 1009 RSGKMIVLRQLLRIWFQKQHRVLLFCQTRQMLNMLESFIKYEHYTYLRLDGTVSVKQRQP 1068 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N+ ++ + + G GLNL G + ++ F W+ ++ R + Sbjct: 1069 LIRYFNDNPEVFIFILTTRTGGLGLNLT-GADRVIIFDPDWNPS-----VDVQAKERAWR 1122 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G ++ V +Y L+ TI+E + R K + ++ K+ Sbjct: 1123 IGQQKPVTIYRLLTAGTIEEKIYHRQVFKQLLTFKVMKDPKQR 1165 >gi|331218680|ref|XP_003322017.1| helicase SWR1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301007|gb|EFP77598.1| helicase SWR1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1764 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 65/160 (40%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KD 97 + K+ L+ ++++ +++ + + +++ + Sbjct: 1424 LDSGKLARLDSLLQELKTGGHRVLIYFQMTRMIDLMEEYLSFRHYRYLRLDGSSTISERR 1483 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + N +I + + G G+NL + ++F+ W+ Q + R Sbjct: 1484 DMVMDWQNRPEIFIFLLSTRAGGLGINLTA-ADTVIFYDCDWNPSNDQ-----QAMDRAH 1537 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR V VY LI TIDE +L+ RTK T+QD ++ + Sbjct: 1538 RLGQKRQVTVYRLITTGTIDERILKLARTKKTVQDAVVGS 1577 >gi|281211032|gb|EFA85198.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1376 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 27/201 (13%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEV--------HDEKIKALEVII--EKANAAPI 71 N ++ N ++ K+ K+K ++ I+ + + Sbjct: 873 KKNLLYAIDILKKICNHPDILHKDDDDKDKPDDYGNVERSSKLKVVQEILPMWQQQGHKV 932 Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKI-PLLFAHPASCG 120 ++ L +++ + ++E+N I + G Sbjct: 933 LLFCQTRQMLDIVEEFIKNSNYQYRRMDGTTSIKVRQTLVEEFNNDPILFIFLLTTKVGG 992 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL G N ++ F W+ + R + G K+ V +Y L+ TI+E + Sbjct: 993 LGINLT-GANRVILFDPDWNPST-----DIQARERVYRIGQKKTVTIYRLMTTGTIEEKI 1046 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 R K + + +L +++ Sbjct: 1047 YHRQIYKQFLSNKILKDPRQK 1067 >gi|281209956|gb|EFA84124.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1905 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 70/225 (31%), Gaps = 38/225 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 K Y + N+ + QL N + + K Sbjct: 1123 KLYRAVLDNN--GVDSIIAGKQNALTTMTTLKQLCNYPSLIKSDDYSKYFTDSNDTTTPT 1180 Query: 53 ------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA----------RLQKAFPQGRTL 94 K++ +E ++ ++ ++ L Sbjct: 1181 DFDASQSGKMEFVEQLLITLKSLGDRAVLVSNYTQTLDVFELLLKKLSIQSYRIDGQVKA 1240 Query: 95 DKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + ++N+ + + G GLNL G N +V + W+ I+ Sbjct: 1241 TERQDRVDKFNDPSNKTHTVFLLSSKAGGVGLNL-IGANHIVLYDPDWNPA-----IDIQ 1294 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + V +Y L+ TI+E + QR K ++ + +++ Sbjct: 1295 AMERVWREGQTKPVSIYRLLTAGTIEEKIHQRQIIKESLSNSVVD 1339 >gi|292559006|gb|ADE32007.1| SWIM domain-containing protein [Streptococcus suis GZ1] Length = 1037 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 20/209 (9%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + I S + Q+ + + EE + +K L + Sbjct: 822 QQMRTQ-IAGADDAQINRSKIEILSGITRLRQICDTPSLFMEEFSGESGKLNSLKELLLQ 880 Query: 63 IEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 +++ +++ F + L ++ Q +N G Sbjct: 881 LKEGEH-RVLIFSQFRNMLEKIEEQLIEIGMTSYTLTGSTPANQRQEMTQAFNAGSRDAF 939 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ LWW+ +E ++R + G V Y LI Sbjct: 940 LISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAISRAHRMGQTEKVECYRLIT 993 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + K + +L+ + Sbjct: 994 RGTIEEKIQELQENKKNLVKTVLDGNESR 1022 >gi|170726566|ref|YP_001760592.1| non-specific serine/threonine protein kinase [Shewanella woodyi ATCC 51908] gi|169811913|gb|ACA86497.1| Non-specific serine/threonine protein kinase [Shewanella woodyi ATCC 51908] Length = 1110 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 71/248 (28%), Gaps = 55/248 (22%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------------- 42 + ++ L G ++ +K Q+ Sbjct: 855 EELRK--AVSLSGMKRNRLAISNALLKLRQVCCHPDLLKITQIADRTDKEGQRVEHLVAN 912 Query: 43 ---------------DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ 85 H K+ L + + I++ F S L + Sbjct: 913 SSMNVRQKLVAKMENQSPNSTGVTHSGKLNWLADKLPGMLEDGRRILIFSSFTSMLTLIS 972 Query: 86 --------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + ++P+ + G GLNL ++++ Sbjct: 973 ELLESLSIPHVELTGKSRDRANLVNRFQNCEVPVFLISLKAGGAGLNLTA-ADVVIHTDP 1031 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 WW+ Q R + G ++VFVY LI ++T++E + + +K + + ++ Sbjct: 1032 WWNPAAEQ-----QASDRAYRIGQDKSVFVYKLICKDTVEERIQRLQESKYNLAQSIYDS 1086 Query: 198 LKKETIHV 205 + + Sbjct: 1087 ETQHLTEM 1094 >gi|146319376|ref|YP_001199088.1| SNF2 family DNA/RNA helicase [Streptococcus suis 05ZYH33] gi|146321581|ref|YP_001201292.1| SNF2 family DNA/RNA helicase [Streptococcus suis 98HAH33] gi|145690182|gb|ABP90688.1| Superfamily II DNA/RNA helicase, SNF2 family [Streptococcus suis 05ZYH33] gi|145692387|gb|ABP92892.1| Superfamily II DNA/RNA helicase, SNF2 family [Streptococcus suis 98HAH33] Length = 1037 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 20/209 (9%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + I S + Q+ + + EE + +K L + Sbjct: 822 QQMRTQ-IAGADDAQINRSKIEILSGITRLRQICDTPSLFMEEFSGESGKLNSLKELLLQ 880 Query: 63 IEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 +++ +++ F + L ++ Q +N G Sbjct: 881 LKEGEH-RVLIFSQFRNMLEKIEEQLIEIGMTSYTLTGSTPANQRQEMTQAFNAGSRDAF 939 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ LWW+ +E ++R + G V Y LI Sbjct: 940 LISLKAGGVGLNLT-GADTVILVDLWWNPA-----VEAQAISRAHRMGQTEKVECYRLIT 993 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + + K + +L+ + Sbjct: 994 RGTIEEKIQELQENKKNLVKTVLDGNESR 1022 >gi|211828096|gb|AAH51825.2| SMARCA1 protein [Homo sapiens] Length = 965 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 350 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 409 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 410 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 469 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 470 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 524 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 525 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 576 >gi|322419839|ref|YP_004199062.1| SNF2-like protein [Geobacter sp. M18] gi|320126226|gb|ADW13786.1| SNF2-related protein [Geobacter sp. M18] Length = 1124 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 70/190 (36%), Gaps = 20/190 (10%) Query: 25 SASKTVKCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 + + +K Q+ + + + + L+ + + ++V F S L Sbjct: 929 ALTAILKLRQICLCSRLILPDATDRSPKIEFLVDQLQELFAE--GHSVLVFSQFTSFLDI 986 Query: 84 LQKAFPQG----------RTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNIL 132 +Q+ Q + + +Q + + P + + G GLNL + + Sbjct: 987 VQQGLAQHGITSSRLDGTTPVGRRKELVQNFQDSVEPGVFLLSLKAGGRGLNLTR-ASYV 1045 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 WW+ +E R + G KR V + L+ +++I+E +++ + K + Sbjct: 1046 FHLDPWWNPA-----VESQASDRAHRIGQKRQVTITRLLMRHSIEEKMMELKKRKLKLYR 1100 Query: 193 LLLNALKKET 202 LL + + Sbjct: 1101 ALLEDAEHQG 1110 >gi|119964500|ref|YP_949262.1| helicase/SNF2 family domain-containing protein [Arthrobacter aurescens TC1] gi|119951359|gb|ABM10270.1| putative helicase/SNF2 family domain protein [Arthrobacter aurescens TC1] Length = 1151 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 72/210 (34%), Gaps = 22/210 (10%) Query: 2 KQYH---KFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ L N F QL+ A D V K+ Sbjct: 931 KVYQTHLQRERQKILGLIDDVNKNRFTIFQSLTLLRQLSLDASLVD--SSLSGVRSSKLD 988 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEG 107 L +E + ++ F L ++++ + + E+ G Sbjct: 989 VLFEQLEDLISEGHRALIFSQFTGFLGKVRERLDAEGVEYCYLDGSTRNRGDVVSEFKNG 1048 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + + WW+ E V R + G R V V Sbjct: 1049 AAPVFLISLKAGGFGLNLTE-ADYVFLLDPWWNPAS-----EAQAVDRTHRIGQARNVMV 1102 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI+E V+ KS + ++ Sbjct: 1103 YRLVAKDTIEEKVMALKAKKSQLFADVMEG 1132 >gi|256818868|ref|YP_003140147.1| Non-specific serine/threonine protein kinase [Capnocytophaga ochracea DSM 7271] gi|256580451|gb|ACU91586.1| Non-specific serine/threonine protein kinase [Capnocytophaga ochracea DSM 7271] Length = 950 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + R + E I FN+ + ++ +++ D+E E++ Sbjct: 733 KWYETEKSKVRNQLLQIN-EPITEFNTLNMLMRLRKISLHPKLVDKESKIASGKYEEVIN 791 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEG 107 + +++ ++ F S LA ++ + + ++ N Sbjct: 792 YMEELLQSS-RKALIFSSFVSHLALYEEWCNKKGIKYAKLTGETPSFERKNQVEMFQNNP 850 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I F + GLNL + ++ WW+ E+ + R + + V V Sbjct: 851 SISFFFISLKAGEVGLNLTQ-ASYVLLLDPWWNP-----FSEKQAIGRAHRIEQQNKVNV 904 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++++TI+E +++ ++K+ + + +++ Sbjct: 905 IRFVSKDTIEEKIIKLQKSKTELSENIIDE 934 >gi|317127485|ref|YP_004093767.1| SNF2-related protein [Bacillus cellulosilyticus DSM 2522] gi|315472433|gb|ADU29036.1| SNF2-related protein [Bacillus cellulosilyticus DSM 2522] Length = 1093 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 62/194 (31%), Gaps = 21/194 (10%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYH 76 + + Q+ + + K++ L +E+A + +++ Sbjct: 893 QENRMKILAGLTRLRQICCHPALFMTNYKGQ---SGKMERLFEYLEEAIASGRRVVLFSQ 949 Query: 77 FNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 F L+ + ++N G+ L G Sbjct: 950 FTQMLSIIQDRLKGYGWQYHYLDGSTPSKERVELANQFNNGEKELFLVSLK-AGGTGLNL 1008 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 GG+ ++ F WW+ +E R + G K+ V V LI TI+E + + Sbjct: 1009 TGGDTVILFDSWWNPA-----VEEQAADRVYRFGQKKVVQVTKLITTGTIEEKIHKLQGQ 1063 Query: 187 KSTIQDLLLNALKK 200 K + D ++ +K Sbjct: 1064 KRELLDKVIQPGEK 1077 >gi|304406559|ref|ZP_07388215.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] gi|304344617|gb|EFM10455.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] Length = 1044 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 73/251 (29%), Gaps = 54/251 (21%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVY------------------- 41 Y + L ++ S + QL + + Sbjct: 783 LYDQTVNALMDKMKMLEGIERKGAILSALTQLKQLCDHPMLLTKEAMPELPAPASGSAAP 842 Query: 42 --------YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----- 86 E K++ L ++++ ++ + LQ+ Sbjct: 843 PAIEDNPGMSEAAEMVISRSSKLERLLAMVKELREEGDRCLIFTQYIGMGNMLQQVLQNQ 902 Query: 87 ------AFPQGRTLDKDPCTIQEWN------EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + I+++ + + + + G GLNL N + Sbjct: 903 LQEQVLYLNGSTSKTARDRMIEQFQSQTLPADEQPNVFILSIKAGGVGLNLTA-ANHVFH 961 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F WW+ +E R + G R V V+ IA T++E + + L +K + D + Sbjct: 962 FDRWWNPA-----VENQATDRAYRMGQTRDVQVHKFIALGTLEEKIDEMLESKQRLSDDV 1016 Query: 195 LNALKKETIHV 205 + + + + Sbjct: 1017 ITSSEGWITEL 1027 >gi|255726894|ref|XP_002548373.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240134297|gb|EER33852.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 1043 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 75/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEK 55 + Y KF + DL N ++ N + K+ K Sbjct: 568 ELYEKFLQS--EDLDSILKGKRNMLMGIDILRKICNHPDLVYRDAMMKKKSYGDPSRSGK 625 Query: 56 IKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------------FPQGRTLDKD 97 ++ L+ ++ ++ ++ L L+K + + Sbjct: 626 MQVLKNLLQIWQSEDHKTLLFCQTRQMLDILEKFVANLPLLNGGEFNYLRMDGSTPISRR 685 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N + + + G G+NL G + ++ + W+ + R Sbjct: 686 QMLVDKFNRDPNMHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DIQARERA 739 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K+ + +Y L+ +I+E + R K+ + + +L K+ Sbjct: 740 WRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQR 784 >gi|259149765|emb|CAY86569.1| Snf2p [Saccharomyces cerevisiae EC1118] Length = 1706 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA----SKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 Y + + + +N + ++ ++ ++ N ++E + Sbjct: 1025 MYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDD 1084 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K +++ + + ++ D+ Sbjct: 1085 IWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDE 1144 Query: 97 DPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1145 RSELLRLFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 1198 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E++L+R K I ++ A K Sbjct: 1199 RAHRIGQKNEVRILRLITTNSVEEVILERAHKKLDIDGKVIQAGK 1243 >gi|302916021|ref|XP_003051821.1| chromatin remodeling complex SWI/SNF, component SWI2 and related ATPase [Nectria haematococca mpVI 77-13-4] gi|256732760|gb|EEU46108.1| chromatin remodeling complex SWI/SNF, component SWI2 and related ATPase [Nectria haematococca mpVI 77-13-4] Length = 1427 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 80/225 (35%), Gaps = 33/225 (14%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 K Y + D +G A ++ ++ +L N +D ++ Sbjct: 808 KLYKQMVTHNKLVVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDVVENVMNPLSISNDL 867 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K +++ + + + ++ R + Sbjct: 868 LWRTAGKFELLDRILPKYQASGHRVLMFFQMTAIMDIMEDYLRYKRVEYLRLDGTTKSDE 927 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 928 RSDLLREFNAPDSKYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 981 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R R K + ++ A + Sbjct: 982 RAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGR 1026 >gi|159472859|ref|XP_001694562.1| predicted protein [Chlamydomonas reinhardtii] gi|158276786|gb|EDP02557.1| predicted protein [Chlamydomonas reinhardtii] Length = 856 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 70/194 (36%), Gaps = 29/194 (14%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEV---------HDEKIKALEVIIEKAN--AAPII 72 + + ++ ++ N + + + + K+ L+ ++ K ++ Sbjct: 604 KAMNLLMQLRKVCNHPFMFKDAEPQFDGVSAPEELITGSGKMLVLDRLLSKLKARGHRVV 663 Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPC----------TIQEWNEGKIPLLF--AHPASCG 120 + FN L ++ + I+++N+ + + G Sbjct: 664 LFSQFNIMLDIIEDYLVARGHKYRRLDGSTNRIKRMIDIEQFNKPNSDIFIYILCTRAGG 723 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NLQ + V F W+ + + + R + G R V VY L+++ T+++ + Sbjct: 724 LGVNLQT-ADTCVLFDSDWNPQ-----WDLQAMARVHRIGQTRPVHVYRLVSEGTVEDRI 777 Query: 181 LQRLRTKSTIQDLL 194 R K + ++ Sbjct: 778 QARAEGKLYLDQMV 791 >gi|257075448|ref|ZP_05569809.1| helicase [Ferroplasma acidarmanus fer1] Length = 1015 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 74/217 (34%), Gaps = 22/217 (10%) Query: 3 QYHKFQRELYCDLQ-GENIEAFNS-ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + + + IE + S K +L + + + EK+ L Sbjct: 780 LYEAAVNTMLESVNTKKGIERKSVILSTITKLKRLLDHPSLVSGDLDRRLDRSEKLVRLR 839 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWNEG 107 ++E+ + +V + +++ + ++ + + Sbjct: 840 EMLEEAIDSNQKTLVFTQYTDAGKIIKEEMLKKLGEEALYLNGSTPMSLRQNMVERFQDP 899 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G G+NL ++ F WW+ +E R + G + V Sbjct: 900 DGPKIFIISVKAGGAGINLTA-ATNVIHFDRWWNPS-----VEDQATDRAYRIGQMKNVH 953 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 VY I+ TI+E + + KS +++ ++ A + I Sbjct: 954 VYKFISTGTIEEKIDDIIEGKSMLREKIIGASDESWI 990 >gi|310791654|gb|EFQ27181.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1458 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 81/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 K Y + D QG A ++ ++ +L N + E ++ + Sbjct: 820 KLYKQMVTHNKIVVSDGQGGKAGARGLSNMIMQLRKLCNHPFVFGEVENTMNPLNISNDM 879 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ ++ K +++ + + + ++ D+ Sbjct: 880 LWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDYLRYRNLKYLRLDGTTKSDE 939 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 940 RSDLLREFNAPDSEYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 993 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R R K + ++ A + Sbjct: 994 RAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGR 1038 >gi|145295306|ref|YP_001138127.1| hypothetical protein cgR_1246 [Corynebacterium glutamicum R] gi|140845226|dbj|BAF54225.1| hypothetical protein [Corynebacterium glutamicum R] Length = 1034 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 73/223 (32%), Gaps = 26/223 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y ++ L + + Q+ N ++ + + K+ Sbjct: 799 LYKALVEDVQKQLDERQGMSRKGLVLATITRIKQICNHPAHFLGDGSEVTLKGKHRSGKV 858 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQE 103 +AL +I+ +++ + + L G T + E Sbjct: 859 EALMELIDTAVKEERRMLIFTQYAAFGRILAPYLSDRLGTNIPFLHGGVTKPGRDRMVAE 918 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + E P + + G GLNL +I+V WW+ +E R + G + Sbjct: 919 FQSEDGPPAMILSLKAGGTGLNLTA-ASIVVHMDRWWNPA-----VENQATDRAFRIGQR 972 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V VY +I T++E + L K+ + ++ + + Sbjct: 973 KNVDVYKMITVGTMEESIQDILDGKTHLASAIVGEGEGWITEL 1015 >gi|320586275|gb|EFW98954.1| rsc complex subunit [Grosmannia clavigera kw1407] Length = 1493 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 81/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 + Y + + + D +G + A ++ ++ +L N +DE + Sbjct: 840 RLYKEMLTNNKLIVSDGKGGKMGARGLSNVIMQLRKLCNHPFVFDEIETVMNPLSISNDL 899 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + LE ++ K +++ + + + ++ + Sbjct: 900 LWRTAGKFELLERVLPKYQATGHRVLMFFQMTAIMDIMEDFLRYRNVQYLRLDGTTKADE 959 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N P + G GLNLQ + ++ + W+ + + Sbjct: 960 RSDLLREFNAPNSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 1013 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +I+E +L+R R K + ++ A + Sbjct: 1014 RAHRIGQKNEVRILRLITSTSIEEKILERARYKLDMDGKVIQAGR 1058 >gi|254519060|ref|ZP_05131116.1| helicase [Clostridium sp. 7_2_43FAA] gi|226912809|gb|EEH98010.1| helicase [Clostridium sp. 7_2_43FAA] Length = 1084 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 67/193 (34%), Gaps = 21/193 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 S K QL + K+ AL I+++ I+V Sbjct: 878 DDLKTSKIEILSYITKLRQLCLDPSVLINDYVGT---SGKVDALIEILQQGIEEGHKILV 934 Query: 74 AYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 F S L L +K + E+NEG + + G GL Sbjct: 935 FSQFTSVLKNIASKLRSEHILFSYLDGSIPSEKRLELVNEFNEGINSVFLISLKAGGTGL 994 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL +I++ F WW+ +E R + G V V LIA+N+I+E ++ Sbjct: 995 NLTS-ADIVIHFDPWWNPA-----VEDQATDRAHRFGQTNIVEVIKLIARNSIEEKIIDL 1048 Query: 184 LRTKSTIQDLLLN 196 K + + +++ Sbjct: 1049 QDEKRKLIEKIID 1061 >gi|221501950|gb|EEE27701.1| E1a binding protein P400, putative [Toxoplasma gondii VEG] Length = 2924 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 69/167 (41%), Gaps = 19/167 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK--- 96 K + K+ L ++ K A+ ++ F+ L QG T + Sbjct: 2539 FPHKQTLQDDCGKLIVLAELLTKLRADGHRCLLFTQFSKMLDVLESWINHQGFTYVRLDG 2598 Query: 97 ------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + +N +I L + + G GLNL G + ++F+ W+ ++ Sbjct: 2599 STKVDQRQRVVTRFNANPRIFLFISSTRAGGVGLNLT-GADTVIFYDTDWNPA-----MD 2652 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + R + G R V VY L+ +++I+E + ++ K + +++++ Sbjct: 2653 RQAMDRCHRIGQTRDVHVYRLVTEHSIEENIWRKQLQKRLLDEVVVD 2699 >gi|237844353|ref|XP_002371474.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] gi|211969138|gb|EEB04334.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] Length = 2894 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 69/167 (41%), Gaps = 19/167 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK--- 96 K + K+ L ++ K A+ ++ F+ L QG T + Sbjct: 2509 FPHKQTLQDDCGKLIVLAELLTKLRADGHRCLLFTQFSKMLDVLESWINHQGFTYVRLDG 2568 Query: 97 ------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + +N +I L + + G GLNL G + ++F+ W+ ++ Sbjct: 2569 STKVDQRQRVVTRFNANPRIFLFISSTRAGGVGLNLT-GADTVIFYDTDWNPA-----MD 2622 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + R + G R V VY L+ +++I+E + ++ K + +++++ Sbjct: 2623 RQAMDRCHRIGQTRDVHVYRLVTEHSIEENIWRKQLQKRLLDEVVVD 2669 >gi|30840950|gb|AAL29689.1| Snf2-related chromatin remodeling factor SRCAP [Toxoplasma gondii] gi|221481249|gb|EEE19646.1| hypothetical protein TGGT1_072500 [Toxoplasma gondii GT1] Length = 2924 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 69/167 (41%), Gaps = 19/167 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK--- 96 K + K+ L ++ K A+ ++ F+ L QG T + Sbjct: 2539 FPHKQTLQDDCGKLIVLAELLTKLRADGHRCLLFTQFSKMLDVLESWINHQGFTYVRLDG 2598 Query: 97 ------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + +N +I L + + G GLNL G + ++F+ W+ ++ Sbjct: 2599 STKVDQRQRVVTRFNANPRIFLFISSTRAGGVGLNLT-GADTVIFYDTDWNPA-----MD 2652 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + R + G R V VY L+ +++I+E + ++ K + +++++ Sbjct: 2653 RQAMDRCHRIGQTRDVHVYRLVTEHSIEENIWRKQLQKRLLDEVVVD 2699 >gi|168213595|ref|ZP_02639220.1| helicase, SNF2/RAD54 family [Clostridium perfringens CPE str. F4969] gi|170714879|gb|EDT27061.1| helicase, SNF2/RAD54 family [Clostridium perfringens CPE str. F4969] Length = 1084 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 73/204 (35%), Gaps = 24/204 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 +++ + IE S K QLA + + K +AL I+ + Sbjct: 868 KKQDAEEFNKSKIE---ILSYITKLRQLALDPSVTINDYMGE---SAKTEALVEILNQGI 921 Query: 66 ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I+V F S L + K + E+NEG+ + Sbjct: 922 EEGHKILVFSQFTSVLKNISSRLKEEKISFSYLDGSVSSKKRINMVNEFNEGENSVFLIS 981 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL +I++ F WW+ +E R + G K V V LIA+ T Sbjct: 982 LKAGGTGLNLTS-ADIVIHFDPWWNPA-----VENQATDRAHRMGQKNVVEVIKLIAKGT 1035 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E V+ K + ++ + Sbjct: 1036 IEEKVVALQEEKKELISKIIEEGE 1059 >gi|147765952|emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera] Length = 1249 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 71/215 (33%), Gaps = 30/215 (13%) Query: 11 LYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKAL 59 L +E NS ++ N + E ++ K+K + Sbjct: 709 YRAFLASSEVEQIFDGSRNSLYGIDVMRKICNHPDLLEREHAYQNPDYGNPERSGKMKVV 768 Query: 60 EVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP----------CTIQEWNE- 106 ++ K +++ L L+ G + + I E+N+ Sbjct: 769 AHVLKGWKEQGHRVLLFAQTQQMLDILENFLIAGGYVYRRMDGFTPIKHRMALIDEFNDS 828 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G G NL G N ++ + W+ R + G R V Sbjct: 829 DDVFIFILTTKVGGLGTNLT-GANRVIIYDPDWNPSTDM-----QARERAWRIGQTRDVT 882 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY LI + TI+E V QR K + + +L +++ Sbjct: 883 VYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQQK 917 >gi|255528070|ref|ZP_05394903.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|296186302|ref|ZP_06854706.1| SNF2 family [Clostridium carboxidivorans P7] gi|255508235|gb|EET84642.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|296049103|gb|EFG88533.1| SNF2 family [Clostridium carboxidivorans P7] Length = 1081 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 78/213 (36%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + ++ + + K QL ++ + + K Sbjct: 855 KIYKTYANYAMELIKKKVKDFEFQNSKIEILAYITKLRQLCLDPRVIIKDYNGE---SAK 911 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 I+AL ++ K+ I+V F S L + + + K + + Sbjct: 912 IEALVELLSKSIGQGHRILVFSQFTSVLKNIGRRINKEDICFSYLDGSIPSEKRINLVND 971 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+G+ + + G GLNL ++++ F WW+ +E R + G K+ Sbjct: 972 FNQGENSVFLISLKAGGTGLNLTS-ADVVIHFDPWWNPA-----VEEQATDRAHRIGQKK 1025 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V ++A+ TI+E ++ K + L+ Sbjct: 1026 VVEVIKIVAKGTIEEKIISLQEEKKKLIGSLIE 1058 >gi|19552388|ref|NP_600390.1| putative helicase [Corynebacterium glutamicum ATCC 13032] gi|62390052|ref|YP_225454.1| SNF2 family DNA/RNA helicase [Corynebacterium glutamicum ATCC 13032] gi|21323931|dbj|BAB98557.1| Superfamily II DNA/RNA helicases, SNF2 family [Corynebacterium glutamicum ATCC 13032] gi|41325388|emb|CAF19868.1| Superfamily II DNA/RNA helicases, SNF2 family [Corynebacterium glutamicum ATCC 13032] Length = 1034 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 73/223 (32%), Gaps = 26/223 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVH----DEKI 56 Y ++ L + + Q+ N ++ + + K+ Sbjct: 799 LYKALVEDVQKQLDERQGMSRKGLVLATITRIKQICNHPAHFLGDGSEVTLKGKHRSGKV 858 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQE 103 +AL +I+ +++ + + L G T + E Sbjct: 859 EALMELIDTAVKEERRMLIFTQYAAFGRILAPYLSDRLGTNIPFLHGGVTKPGRDRMVAE 918 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + E P + + G GLNL +I+V WW+ +E R + G + Sbjct: 919 FQSEDGPPAMILSLKAGGTGLNLTA-ASIVVHMDRWWNPA-----VENQATDRAFRIGQR 972 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V VY +I T++E + L K+ + ++ + + Sbjct: 973 KNVDVYKMITVGTMEESIQDILDGKTHLASAIVGEGEGWITEL 1015 >gi|297674406|ref|XP_002815220.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like, partial [Pongo abelii] Length = 816 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|256073356|ref|XP_002572997.1| hypothetical protein [Schistosoma mansoni] gi|238658166|emb|CAZ29229.1| expressed protein [Schistosoma mansoni] Length = 3580 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 72/232 (31%), Gaps = 41/232 (17%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 K Y + L +G + A N + ++ + N + Sbjct: 1420 KYYRAIMERNFSFLCKGSSTNAPNLMNIMMELRKCCNHPFLIKGAEDAILSEFQANDNTL 1479 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ + ++ K A+ +++ L L+ + Sbjct: 1480 SEDDLTFRTMVYASGKLVLIHKLLPKLRADGHKVLIFSQMIRVLDILEDYLVHQGFQFER 1539 Query: 98 ----------PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I ++ + + + G G+NL ++++ + W+ + Sbjct: 1540 IDGRIHGPLRQEAIDRFSIDPDKFVFLLCTKAGGLGINLTA-ADVVIIYDSDWNPQN--- 1595 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + R + G ++ V VY LI +NT + + R K + +L ++ Sbjct: 1596 --DLQAQARCHRIGQQKMVKVYRLITRNTYEREMFDRASLKLGLDRAVLQSM 1645 >gi|149248412|ref|XP_001528593.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Lodderomyces elongisporus NRRL YB-4239] gi|146448547|gb|EDK42935.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Lodderomyces elongisporus NRRL YB-4239] Length = 1926 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 78/227 (34%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGEN-----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--- 53 + Y + + N+ ++ ++ ++ N Y++ +++ Sbjct: 1180 RLYQQMLKYNVLYSGDPQNPDVAKPIKNANNQIMQLKKICNHPFVYEDVENFINPTSENN 1239 Query: 54 -------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARL----------QKAFPQGRTL 94 K + L+ ++ K +++ + + + G Sbjct: 1240 DLIWRVAGKFELLDKVLPKFKQTGHKVLIFFQMTQIMDIMEDFLRLRNLKYMRLDGGTKA 1299 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1300 DDRTELLKLFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 1353 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++++E++L+R K I ++ A K Sbjct: 1354 QDRAHRIGQKNEVRILRLITEDSVEEMILERAHAKLEIDGKVIQAGK 1400 >gi|320581583|gb|EFW95803.1| DNA dependent ATPase [Pichia angusta DL-1] Length = 1003 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 67/227 (29%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWKEVHD 53 K Y F D+ N+ ++ N E Sbjct: 538 KLYEDFLNS--EDINKILRGKRNALFGIDVLRKICNHPDLVDLKLRKKHQRTAEQLEARA 595 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARLQ----------------KAFPQGRTLD 95 K++ + ++ + ++ L LQ + Sbjct: 596 GKLQVVHALLDVWFSEGRKTLIFTQTRQMLDILQDFMEALNYETESKFSFMRMDGTTPIS 655 Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + ++N + G G+NL G + ++ + W+ + Sbjct: 656 QRQSMVDQFNTNPMYNVFLLTTRVGGLGVNLT-GASRVIIYDPDWNPST-----DVQARE 709 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V +Y L+ +I+E + R K + + +L K++ Sbjct: 710 RAWRLGQKKDVVIYRLMMAGSIEEKIYHRQIFKQLLTNKILKDPKQK 756 >gi|172036268|ref|YP_001802769.1| hypothetical protein cce_1353 [Cyanothece sp. ATCC 51142] gi|171697722|gb|ACB50703.1| unknown [Cyanothece sp. ATCC 51142] Length = 1046 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 70/217 (32%), Gaps = 24/217 (11%) Query: 2 KQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWK---EVHDEKI 56 + Y + +++ + S +K Q+ N ++ ++K+ K + Sbjct: 811 QLYQELVDNSLMEIEEKTGIQRKGLILSLLLKLKQICNHPDHFLKKKNLKKAEQSGKLLR 870 Query: 57 KALEVIIEKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ F+ A+ + I + Sbjct: 871 LEEMLEELIQEGDHALIFTQFSEWGKLLKPYLEKKFAQEVLFLYGATRRIQRQEMIDRFQ 930 Query: 106 EGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL N + WW+ +E R + G KR Sbjct: 931 HDPNGPRIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPA-----VENQATDRAFRLGQKR 984 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ + T++E + + L +K + + +++ ++ Sbjct: 985 NVQVHKFVCTGTLEERINEMLESKQKLAEQTVDSGEQ 1021 >gi|156064177|ref|XP_001598010.1| hypothetical protein SS1G_00096 [Sclerotinia sclerotiorum 1980] gi|154690958|gb|EDN90696.1| hypothetical protein SS1G_00096 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1103 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 65/191 (34%), Gaps = 27/191 (14%) Query: 32 CLQLANGAVYYDEEKHWKEV-------HDEKIKALEVII--EKANAAPIIVAYHFNSDLA 82 ++ N D+ K K++ ++ ++ K ++ L Sbjct: 728 LRKICNHPDLLDKRLKTKPNYKWGNGNKSGKMQVVKALLQMWKGYGHKTLLFSQGVQMLD 787 Query: 83 RLQKA-----------FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L++ G + + ++N + + + G G+NL G N Sbjct: 788 ILEEFVKKLGGFNYLRMDGGTAIKDRQTLVDQFNNDPNMHVFLLTTKVGGLGVNLT-GAN 846 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ F W+ + R + G K+ V +Y L+ TI+E + R K + Sbjct: 847 RVIIFDPDWNPST-----DVQARERAWRLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFL 901 Query: 191 QDLLLNALKKE 201 + +L K+ Sbjct: 902 TNKILKDPKQR 912 >gi|73977790|ref|XP_867156.1| PREDICTED: similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)... isoform 6 [Canis familiaris] Length = 1056 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|261404317|ref|YP_003240558.1| SNF2-like protein [Paenibacillus sp. Y412MC10] gi|261280780|gb|ACX62751.1| SNF2-related protein [Paenibacillus sp. Y412MC10] Length = 986 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 75/237 (31%), Gaps = 40/237 (16%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 Y + L +Q + + QL + +E + Sbjct: 740 LYDQTVNSLLERMQKLEGIERKGAILAALTQFKQLCDHPALLTKEPLPELPGGGGLLDTE 799 Query: 52 ----HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTL 94 K++ L ++++ ++ + +++ Q Sbjct: 800 AVVNRSAKLERLLSMVKELRDEGERCLIFTQYIGMGEMMRQVLHQELGEPVLYLNGSTPK 859 Query: 95 DKDPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I+++ +P ++ + G GLNL N + F WW+ + Sbjct: 860 RTRDRMIEQFQSQTLPPEEQPNVMILSIKAGGVGLNLTA-ANHVFHFDRWWNPA-----V 913 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 E R + G + V VY I+ T++E + + L +K + D ++ + + + Sbjct: 914 ENQATDRAYRMGQTKDVQVYKFISMGTLEERIDEMLESKQQLSDQVIASSEGWITEL 970 >gi|308800854|ref|XP_003075208.1| Cockayne syndrome group B (ISS) [Ostreococcus tauri] gi|116061762|emb|CAL52480.1| Cockayne syndrome group B (ISS) [Ostreococcus tauri] Length = 1134 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 67/221 (30%), Gaps = 30/221 (13%) Query: 2 KQYHK-FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HDE 54 + Y ++ + EA ++ N + Sbjct: 601 EAYRAYLASREVEEILDGSREA---LGGIDVLRKIVNHPDLLERRTQAASEEYGDASRSG 657 Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC----------TIQ 102 K++ ++ + +V L L+ A + + I Sbjct: 658 KLQVTLKVLSLWREQGHRCLVFSQTQQMLDILEAAVARAGYSYRRMDGNTSIGMRMSLID 717 Query: 103 EWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N+ I + G G+NL G N ++ F W+ + R + G Sbjct: 718 EFNDNDKGIFVFLLTTKVGGLGVNLT-GANRVMLFDPDWNPST-----DAQARERAWRIG 771 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++ V VY LI TI+E V R K + +L K+ Sbjct: 772 QQKEVTVYRLITAGTIEEKVYHRQIYKEFLTSKVLKDPKQR 812 >gi|293354700|ref|XP_002728549.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Rattus norvegicus] Length = 1094 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 256 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 315 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 316 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 375 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 376 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 430 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 431 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 482 >gi|225438089|ref|XP_002272543.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1227 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 71/215 (33%), Gaps = 30/215 (13%) Query: 11 LYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKAL 59 L +E NS ++ N + E ++ K+K + Sbjct: 687 YRAFLASSEVEQIFDGSRNSLYGIDVMRKICNHPDLLEREHAYQNPDYGNPERSGKMKVV 746 Query: 60 EVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP----------CTIQEWNE- 106 ++ K +++ L L+ G + + I E+N+ Sbjct: 747 AHVLKGWKEQGHRVLLFAQTQQMLDILENFLIAGGYVYRRMDGFTPIKHRMALIDEFNDS 806 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G G NL G N ++ + W+ R + G R V Sbjct: 807 DDVFIFILTTKVGGLGTNLT-GANRVIIYDPDWNPSTDM-----QARERAWRIGQTRDVT 860 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY LI + TI+E V QR K + + +L +++ Sbjct: 861 VYRLITRGTIEEKVYQRQIYKHFLTNKILKNPQQK 895 >gi|145352136|ref|XP_001420413.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580647|gb|ABO98706.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1769 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 81/253 (32%), Gaps = 61/253 (24%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----------NSASKTVKCLQLANGAVYYDEEKHWK- 49 K Y F+ + + + + A + + +L + + K Sbjct: 1451 KMYDAFES---SEAKDQAVSAIEGGGGAEGAAQHVFTTLQYLRKLCSHPKLVVSDGASKK 1507 Query: 50 ---EVHDEKIKALEVIIEKAN-----------------------AAPIIVAYHFNSDLAR 83 E+ K AL+ I+ ++V S L Sbjct: 1508 FNPEMRSPKFDALKQILIDCGIGVDLEEEKSNGDEGKPNPASGAGHRVLVFSQLKSLLDL 1567 Query: 84 LQKAFPQ-------------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 ++ + ++++N + I +L G GLNL Sbjct: 1568 VENELFTTQMRDVSWLRLDGSIPPSQRFDVVRKFNADPSIDVLLLTTHVGGLGLNLTS-A 1626 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + +VF W+ ++ + + R + G ++ V VY ++ + T++E ++ R K Sbjct: 1627 DTVVFLEHDWNPQK-----DLQAMDRAHRLGQRKTVNVYRILTRGTLEEKIMSLQRFKLD 1681 Query: 190 IQDLLLNALKKET 202 + + ++NA Sbjct: 1682 VANAVVNADNASM 1694 >gi|126272865|ref|XP_001366076.1| PREDICTED: similar to excision repair protein [Monodelphis domestica] Length = 1492 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 73/231 (31%), Gaps = 41/231 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y F +E+Y L GE S V ++ N + + Sbjct: 768 KVYQNFIDSKEVYRILNGE----MQVFSGLVALRKICNHPDLFSGGPKIIKGIPDDELEE 823 Query: 51 -------VHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQG 91 K+ +E ++ +++ L L+ Sbjct: 824 ADQFGYWKRSGKMIVVESLLKIWHKQGHRVLLFSQSRQMLHLLEVFLRARDYSYLKMDGT 883 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T+ I +N + I + G G+NL G N ++ + W+ + Sbjct: 884 TTIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLT-GANRVIIYDPDWNPST-----DT 937 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 938 QARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRILKDPKQR 988 >gi|308176367|ref|YP_003915773.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] gi|307743830|emb|CBT74802.1| putative ATP-dependent helicase [Arthrobacter arilaitensis Re117] Length = 1115 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 67/198 (33%), Gaps = 14/198 (7%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 ++++ ++ + F LA D E + ++ Sbjct: 906 RQKILHLVEDLDRNRFTIFQSLTHLRMLALEPSLVDPELSDVTGSKLEALFDQLDDVVGE 965 Query: 68 AAPIIVAYHFNSDLA--------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 ++ F S L R K I+++ EG+ PL + Sbjct: 966 GHRALIFSQFTSYLKVLADKLTERGVKFVYLDGNTRNRAKVIEQFKEGEAPLFLISLKAG 1025 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + WW+ +E + R + G R V VY +I+Q TI+E Sbjct: 1026 GFGLNLTE-ADYCFLLDPWWNPA-----VEAQAIDRTHRIGQTRQVMVYRMISQGTIEEK 1079 Query: 180 VLQRLRTKSTIQDLLLNA 197 V+ +K + +++ Sbjct: 1080 VVALQESKRKLISTVMDE 1097 >gi|226307557|ref|YP_002767517.1| helicase [Rhodococcus erythropolis PR4] gi|226186674|dbj|BAH34778.1| putative helicase [Rhodococcus erythropolis PR4] Length = 1060 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 73/209 (34%), Gaps = 22/209 (10%) Query: 3 QYH---KFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + +R+ L + + F QL+ DEE V K+ A Sbjct: 842 IYDTHLQRERQKILGLLDDVDKNRFTILQSQTVLRQLSLDVSLVDEESG--PVPSAKVDA 899 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWNEGK 108 L ++ ++ F L ++ + ++E+ G Sbjct: 900 LVEQLDDVIAGGHRALIFSQFTGFLGSVRKRLEAEKIPYSYLDGSTRNRGEVLEEFKSGV 959 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P+ + G GLNL + WW+ E V R + G R V VY Sbjct: 960 APVFLISLKAGGFGLNLTE-ADYCFILDPWWNPAA-----EAQAVDRTHRIGQTRNVMVY 1013 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LIA++TI+E V+ KS + +++A Sbjct: 1014 RLIAKDTIEEKVMALKAKKSALFSNVMDA 1042 >gi|301783501|ref|XP_002927161.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda melanoleuca] Length = 1481 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 75/230 (32%), Gaps = 40/230 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 + Y F +E+Y L G+ S V ++ N + +E Sbjct: 765 RVYQNFIDSKEVYRILNGD----MQIFSGLVALRKICNHPDLFSGGPKNPKDIPDGELEE 820 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 821 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTT 880 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I +N + I + G G+NL G N ++ + W+ + Sbjct: 881 AIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLT-GANRVIIYDPDWNPST-----DTQ 934 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 935 ARERAWRIGQKKQVTVYRLLTAGTIEEKIFHRQIFKQFLTNRVLKDPKQR 984 >gi|57096815|ref|XP_532676.1| PREDICTED: similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)... isoform 1 [Canis familiaris] Length = 1052 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|6324864|ref|NP_014933.1| Snf2p [Saccharomyces cerevisiae S288c] gi|134589|sp|P22082|SNF2_YEAST RecName: Full=Transcription regulatory protein SNF2; AltName: Full=ATP-dependent helicase SNF2; AltName: Full=Regulatory protein GAM1; AltName: Full=Regulatory protein SWI2; AltName: Full=SWI/SNF complex component SNF2; AltName: Full=Transcription factor TYE3 gi|4500|emb|CAA40969.1| GAM1/SNF2 protein [Saccharomyces cerevisiae] gi|172632|gb|AAA35059.1| SNF2protein [Saccharomyces cerevisiae] gi|806532|dbj|BAA14423.1| RIC1 [Saccharomyces cerevisiae] gi|1279713|emb|CAA61793.1| regulatory protein gam1 [Saccharomyces cerevisiae] gi|1420644|emb|CAA99517.1| SNF2 [Saccharomyces cerevisiae] gi|285815161|tpg|DAA11054.1| TPA: Snf2p [Saccharomyces cerevisiae S288c] Length = 1703 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA----SKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 Y + + + +N + ++ ++ ++ N ++E + Sbjct: 1022 MYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDD 1081 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K +++ + + ++ D+ Sbjct: 1082 IWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDE 1141 Query: 97 DPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1142 RSELLRLFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 1195 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E++L+R K I ++ A K Sbjct: 1196 RAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGK 1240 >gi|325116597|emb|CBZ52150.1| putative SNF2 family N-terminal domain-containing protein [Neospora caninum Liverpool] Length = 2973 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 69/167 (41%), Gaps = 19/167 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK--- 96 K + K+ L ++ K A+ ++ F+ L QG T + Sbjct: 2588 FPHKQTLQDDCGKLIILAELLTKLRADGHRCLLFTQFSKMLDVLESWINHQGFTYVRLDG 2647 Query: 97 ------DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + +N +I L + + G GLNL G + ++F+ W+ ++ Sbjct: 2648 STKVDQRQRVVTRFNASPRIFLFISSTRAGGVGLNLT-GADTVIFYDTDWNPA-----MD 2701 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + R + G R V VY L+ +++I+E + ++ K + +++++ Sbjct: 2702 RQAMDRCHRIGQTRDVHVYRLVTEHSIEENIWRKQLQKRLLDEVVVD 2748 >gi|87307136|ref|ZP_01089281.1| swi/snf family protein [Blastopirellula marina DSM 3645] gi|87289876|gb|EAQ81765.1| swi/snf family protein [Blastopirellula marina DSM 3645] Length = 589 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 78/205 (38%), Gaps = 23/205 (11%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + E L+ GE + + ++ Q+ N +D D+ + Sbjct: 364 ETYELAENEGIVRLEKMGEELTVQHVFELVLRLKQICN----FDPRTGDSTKMDQLRADM 419 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTIQEWN-EGKIP 110 E ++ A+ IV + + ++++ + K I+++ + Sbjct: 420 EEVV--ASGKKAIVFSQWTQTIEQIRRQLEPFGPLEYHGKIPSKKRDGVIEQFKHDPSKS 477 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ + GLNLQ+ + F WW+ IE + R + G K AV + Sbjct: 478 VILMSYGAGSVGLNLQF-CEYVFLFDRWWNPA-----IEDQAINRAHRIGAKGAVTISRY 531 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 +A NTI++ + Q L K + + L Sbjct: 532 LAMNTIEDRIDQVLSEKRELFNTLF 556 >gi|311262519|ref|XP_003129222.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Sus scrofa] Length = 1052 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|309702946|emb|CBJ02277.1| putative phage protein [Escherichia coli ETEC H10407] Length = 134 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 85/133 (63%), Positives = 112/133 (84%) Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 ++VAYH+ DL RL KAFP+GR LD+DP T+++WN GKIP+LFAHPAS GHGLN+Q GGN Sbjct: 1 MLVAYHWKHDLERLLKAFPRGRHLDQDPQTLRDWNSGKIPVLFAHPASAGHGLNMQDGGN 60 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ILVFFS WWDLE++QQ+IERIG TRQ QAG R VF++++IA +T+DE+V++R +K T+ Sbjct: 61 ILVFFSHWWDLEQYQQIIERIGPTRQIQAGHNRPVFIHHIIAADTMDEMVMERRNSKRTV 120 Query: 191 QDLLLNALKKETI 203 QD+LL+A+KK I Sbjct: 121 QDILLDAMKKRGI 133 >gi|324998496|ref|ZP_08119608.1| helicase [Pseudonocardia sp. P1] Length = 595 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 67/217 (30%), Gaps = 21/217 (9%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y E + L + + + + Q+ E L Sbjct: 366 ELYTAVLDEAFGRGLGSGSARRGHVLALLTRLKQICVHPALAGAEDLEYSGRSASFDRLT 425 Query: 61 VIIEK--ANAAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 ++ + N +V + L G + + E++ G Sbjct: 426 ELVTEIVDNDEAALVFTQYRTAGDLLVSRLSDRLGMAVPFLHGGLSRPARERLVAEFSGG 485 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P+L + G GL L ++ WW+ +E R + G R V Sbjct: 486 AGPPVLILSLRAAGTGLTLTR-ATHVLHLDRWWNPA-----VEAQASDRAHRIGQTRPVT 539 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V+ + T++EL+ + R K+ + D L + T+ Sbjct: 540 VHTFTTRGTVEELIAELHRGKAGLADAALGQAEASTV 576 >gi|251778971|ref|ZP_04821891.1| hypothetical ATP-dependent helicase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083286|gb|EES49176.1| hypothetical ATP-dependent helicase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 1055 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 76/218 (34%), Gaps = 25/218 (11%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + +++ L+ + + QL E+ E KI Sbjct: 832 KMYKMYVKDIQDKLKQIDSRNNKIAIFAYLTRLRQLCLDPSIIVEDY---EGGSGKINVA 888 Query: 60 EVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEG 107 + +I+K N I++ F S L + E+N Sbjct: 889 KELIKKSIKNNHKILLFSQFTSLLNKVCDELKSEQIFYLYLDGSTPSKERIRLAHEFNNN 948 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I + + G GLNL ++++ F WW+ IE R + G K V Sbjct: 949 EDIKIFLISLKAGGTGLNLTS-ADMVIHFDPWWNPA-----IEDQATDRAHRIGQKNVVR 1002 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL-NALKKETI 203 V LI + +I+E +L K + + ++ LK++ + Sbjct: 1003 VIKLITKESIEEKILLLQEDKKALIEDVITGELKEDGL 1040 >gi|255713990|ref|XP_002553277.1| KLTH0D13046p [Lachancea thermotolerans] gi|238934657|emb|CAR22839.1| KLTH0D13046p [Lachancea thermotolerans] Length = 1540 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 75/226 (33%), Gaps = 34/226 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA----SKTVKCLQLANGAVYYDEEKHWKEVHD---- 53 K Y + + + N ++ ++ ++ N +++ + Sbjct: 945 KLYEQMLKHRRLFIGDINSNKMVGMRGFNNQIMQLKKICNHPFVFEDVEDQINPTRETNA 1004 Query: 54 ------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----------QGRTLD 95 K + LE I+ K I++ + + ++ D Sbjct: 1005 NIWRVAGKFELLERILPKFKATGHRILIFFQMTQIMDIMEDFLRLSGMKYLRLDGHTKSD 1064 Query: 96 KDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N+ + G GLNLQ + ++ F W+ + + Sbjct: 1065 DRTLLLNLFNDPNSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQ 1118 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +N+++E++L R K I ++ A K Sbjct: 1119 DRAHRIGQKNEVRILRLITENSVEEVILDRAHKKLDIDGKVIQAGK 1164 >gi|282890006|ref|ZP_06298540.1| hypothetical protein pah_c009o020 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500098|gb|EFB42383.1| hypothetical protein pah_c009o020 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 1234 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 79/210 (37%), Gaps = 21/210 (10%) Query: 9 RELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDE-EKHWKEVHDEKIKALEVIIE 64 RE + + I + + Q+ N + + + +++ K + +++ Sbjct: 1013 REKILQVLHDRTIAIPYMHIFALLSSLKQICNHPAAFLKTPEEYQDYSSGKWDLFKELLD 1072 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLF 113 + ++ ++V + L + Q G T+D+ + + + Sbjct: 1073 EARESSQKVVVFSQYLGMLDIFELYLQQNGIEYATIRGSTVDRRAPIKRFNQDPNCEIFV 1132 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G++L ++++ + WW+ E R + G R V V+ L+ Sbjct: 1133 GSLRAAGLGIDLTA-ASVVIHYDRWWNAAR-----ENQATDRVHRMGQTRGVQVFKLVTL 1186 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETI 203 TI+E + Q + K + + ++ +++ + Sbjct: 1187 GTIEERIDQLISQKGQLLEDVVGVDEQQVL 1216 >gi|151945372|gb|EDN63615.1| transcriptional regulator [Saccharomyces cerevisiae YJM789] Length = 1706 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA----SKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 Y + + + +N + ++ ++ ++ N ++E + Sbjct: 1025 MYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDD 1084 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K +++ + + ++ D+ Sbjct: 1085 IWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDE 1144 Query: 97 DPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1145 RSELLRLFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 1198 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E++L+R K I ++ A K Sbjct: 1199 RAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGK 1243 >gi|281346214|gb|EFB21798.1| hypothetical protein PANDA_016920 [Ailuropoda melanoleuca] Length = 1488 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 75/230 (32%), Gaps = 40/230 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 + Y F +E+Y L G+ S V ++ N + +E Sbjct: 772 RVYQNFIDSKEVYRILNGD----MQIFSGLVALRKICNHPDLFSGGPKNPKDIPDGELEE 827 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 ++ K+ +E ++ +++ L L+ Sbjct: 828 DQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTT 887 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I +N + I + G G+NL G N ++ + W+ + Sbjct: 888 AIASRQPLITRYNEDTSIFVFLLTTRVGGIGVNLT-GANRVIIYDPDWNPST-----DTQ 941 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 942 ARERAWRIGQKKQVTVYRLLTAGTIEEKIFHRQIFKQFLTNRVLKDPKQR 991 >gi|190407590|gb|EDV10857.1| transcription regulatory protein SNF2 [Saccharomyces cerevisiae RM11-1a] Length = 1706 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA----SKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 Y + + + +N + ++ ++ ++ N ++E + Sbjct: 1025 MYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDD 1084 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K +++ + + ++ D+ Sbjct: 1085 IWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDE 1144 Query: 97 DPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1145 RSELLRLFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 1198 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E++L+R K I ++ A K Sbjct: 1199 RAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGK 1243 >gi|325126030|gb|ADY85360.1| SNF2-related domain:Helicase, C-terminal:SWIM Zn-finger [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 637 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 28/215 (13%) Query: 2 KQYHK----FQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ + E + + ++ E+ + EK Sbjct: 414 RLYDAEIARLKNKVMAEDDEGIKREQIEILAALTRIREICCDPGLLYEDYKGE---SEKR 470 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW 104 A +I+ +++ F S L L++ + + + Sbjct: 471 LACVDLIKSAIDEGHKVLLFSQFTSMLDLLEESLKAEEIGFLRIDGQTPKARRLTLVNVF 530 Query: 105 N--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N + + + G GLNL G + ++ + WW++ R + G + Sbjct: 531 NHKDSPAKVFLISLKAGGTGLNLT-GADTVIHYDPWWNVAAQ-----NQATDRAHRIGQE 584 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LIA++T++E +L KS + +L A Sbjct: 585 KKVTVYKLIAKDTVEEAILDLQEAKSLLAQGILTA 619 >gi|213410130|ref|XP_002175835.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Schizosaccharomyces japonicus yFS275] gi|212003882|gb|EEB09542.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Schizosaccharomyces japonicus yFS275] Length = 1162 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 78/226 (34%), Gaps = 33/226 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEVHD---- 53 +K Y + ++ +Q ++ ++ N ++E + + Sbjct: 583 LKLYTQMKKHGMLFVQNGTNGKTGIKGLQNTVMQLKKICNHPFVFEEVEKVVDPSGMSFD 642 Query: 54 ------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 K + L+ I+ K + +++ + + ++ D Sbjct: 643 MLWRVAGKFELLDRILPKLFKSGHRVLMFFQMTQIMNIMEDYLHYRAWKYLRLDGSTKSD 702 Query: 96 KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N+ + + G GLNLQ + ++ F W+ + + Sbjct: 703 DRSQLLHLFNDPASIYTIFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQ-----DLQAQ 756 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V ++ LI + +++E +L R + K I ++ A K Sbjct: 757 DRAHRIGQTKEVRIFRLITEKSVEENILARAQYKLDIDGKVIQAGK 802 >gi|300122947|emb|CBK23954.2| unnamed protein product [Blastocystis hominis] Length = 787 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 71/254 (27%), Gaps = 66/254 (25%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 K Y ++ + I ++ Q+ N V++ Sbjct: 468 KCYLEYLKSDLVQ--ASLIGRSMPFKAIIRLRQICNHPVFFRLFHTETTVTNPIYRSEET 525 Query: 43 ----------------------------DEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 + W+E + + I K +++ Sbjct: 526 PKDDPSGLSPTSHEVFNDEAGDSEMDIDFDAVDWRESSKMIVMNEVLHIWKKEGHKVLIY 585 Query: 75 YH----------FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGL 123 + + + K + +N + I L G G+ Sbjct: 586 TQTVSMLTIIMKYVEEQHFSYCMMDGSTPVVKRQALVDLFNSDPTIFLFLLTTRVGGLGI 645 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL G + ++ F W+ ++ R + G +R V +Y LI TI+E + R Sbjct: 646 NL-VGADRVILFDPDWNPS-----VDIQARERCWRIGQQRPVTIYRLITSGTIEEKIYHR 699 Query: 184 LRTKSTIQDLLLNA 197 K+ + + +L Sbjct: 700 QIFKTVLSNRVLGE 713 >gi|228472212|ref|ZP_04056978.1| Non-specific serine/threonine protein kinase [Capnocytophaga gingivalis ATCC 33624] gi|228276415|gb|EEK15139.1| Non-specific serine/threonine protein kinase [Capnocytophaga gingivalis ATCC 33624] Length = 946 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 80/210 (38%), Gaps = 22/210 (10%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + + R + + +S + ++ Q++N + D + E++ + Sbjct: 732 KWYEQEKSKVRNALLQVAPQGKN-IHSLNMLMRLRQISNHPLLADPKSDIPSGKYEEVVS 790 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEG 107 + +A ++ F S L Q+ + + + + + Sbjct: 791 CLEQLL-LSAQKALIFSSFTSHLEIYQRWCDEQKIKYALLTGATALPDRKVQVERFQKDK 849 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++P F + GLNL + ++ WW+ ER + R + G ++ V V Sbjct: 850 EVPFFFISLKAGEVGLNLTA-ASYVLLLDPWWNP-----FAERQAIARAHRLGQEQKVNV 903 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++Q+T++E +++ + K + + ++ Sbjct: 904 IRFVSQHTLEEKIIRLQQHKRELSEHIIEE 933 >gi|197101878|ref|NP_001127206.1| probable global transcription activator SNF2L1 [Pongo abelii] gi|55726189|emb|CAH89868.1| hypothetical protein [Pongo abelii] Length = 849 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 204 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 263 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 264 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 323 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 324 DGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 378 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 379 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 430 >gi|73977782|ref|XP_867119.1| PREDICTED: similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)... isoform 2 [Canis familiaris] Length = 1046 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 404 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 463 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 464 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 523 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 524 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 578 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 579 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 630 >gi|126658928|ref|ZP_01730070.1| hypothetical protein CY0110_26537 [Cyanothece sp. CCY0110] gi|126619726|gb|EAZ90453.1| hypothetical protein CY0110_26537 [Cyanothece sp. CCY0110] Length = 1046 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 69/217 (31%), Gaps = 24/217 (11%) Query: 2 KQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---DEKI 56 + Y + +++ + S +K Q+ N ++ ++K K+ Sbjct: 811 QLYQELVDNSLTEIEEKTGIQRKGLILSLLLKLKQICNHPDHFLKKKSLKKSEQSGKLLR 870 Query: 57 KALEVIIEKANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ F+ L + + I + Sbjct: 871 LEEMLEELIQEGDHALIFTQFSEWGKLLKPYLEKKLQQEVLFLYGATRRVQRQEMIDRFQ 930 Query: 106 EGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNL N + WW+ +E R + G KR Sbjct: 931 HDPNGPRIFILSLKAGGTGLNLTR-ANHVFHIDRWWNPA-----VENQATDRAFRLGQKR 984 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ + T++E + + L +K + + +++ +K Sbjct: 985 NVQVHKFVCIGTLEERINEMLESKQKLAEQTVDSGEK 1021 >gi|241959152|ref|XP_002422295.1| ATP-dependent helicase, putative; DNA repair and recombination protein rad26 homologue, putative [Candida dubliniensis CD36] gi|223645640|emb|CAX40300.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 1054 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HDEK 55 + Y F + DL+ N ++ N + K+ K Sbjct: 560 ELYESFLQS--EDLESILKGKRNVLMGVDILRKICNHPDLVYRDTLMKKKNYGDPAKSGK 617 Query: 56 IKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------------FPQGRTLDKD 97 ++ L+ ++ + ++ L L+K + K Sbjct: 618 MQVLKNLLRLWQHENHKTLLFCQTRQMLDILEKFVANLSLINGGDFKYLRMDGSTPISKR 677 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + + + G G+NL G + ++ + W+ + R Sbjct: 678 QMLVDAFNQDPDMHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DIQARERA 731 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR + +Y L+ +I+E + R K+ + + +L K+ Sbjct: 732 WRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQR 776 >gi|240281984|gb|EER45487.1| chromatin remodeling complex ATPase chain ISW1 [Ajellomyces capsulatus H143] Length = 1051 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 449 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 508 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKD 97 + K+ L+ I+ K + +++ + L + Sbjct: 509 IDNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQYCRIDGSTAHEDR 568 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ + W+ + + + R Sbjct: 569 IAAIDEYNRPGSEKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 622 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 623 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 668 >gi|256272521|gb|EEU07500.1| Snf2p [Saccharomyces cerevisiae JAY291] Length = 1706 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA----SKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 Y + + + +N + ++ ++ ++ N ++E + Sbjct: 1025 MYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDD 1084 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K +++ + + ++ D+ Sbjct: 1085 IWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDE 1144 Query: 97 DPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1145 RSELLRLFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 1198 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E++L+R K I ++ A K Sbjct: 1199 RAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGK 1243 >gi|126331506|ref|XP_001377204.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 [Monodelphis domestica] Length = 1050 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 408 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 467 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 468 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 527 Query: 93 ----TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 528 DGQTPHDERQDSINAYNEPNSSKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 582 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 583 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 634 >gi|73977784|ref|XP_867131.1| PREDICTED: similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)... isoform 3 [Canis familiaris] Length = 1034 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|291408169|ref|XP_002720327.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1-like isoform 2 [Oryctolagus cuniculus] Length = 1041 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 412 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 471 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 472 PPYTTDEHIVNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 531 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 532 DGQTPHEEREEAIEAFNVPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 586 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 587 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 638 >gi|301604374|ref|XP_002931866.1| PREDICTED: probable global transcription activator SNF2L1 [Xenopus (Silurana) tropicalis] Length = 1029 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 385 VKIYLGLGKMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 444 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 445 PPYTTDTHLVYNSGKMVVLDKLLPKFKEQGSRVLIFSQMTRVLDILEDYCMWRGYEYCRL 504 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 505 DGQTPHEQREAAIETFNSPNSSKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 559 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 560 -VDLQAMDRAHRIGQKKTVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 611 >gi|312079660|ref|XP_003142270.1| transcription activator [Loa loa] gi|307762566|gb|EFO21800.1| transcription activator [Loa loa] Length = 1062 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFN---------SASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ N + + + N + Sbjct: 396 VKIYVGLSKMQREWYTKILMKDIDVVNGAGKLEKARIMNILMHLRKCCNHPYLFDGAEPG 455 Query: 43 --DEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ + L L+ Sbjct: 456 PPYTTDQHLVDNSGKMVLLDKLLVKLKEQGSRVLIFSSMSRMLDLLEDYCWWRSYRYCRL 515 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I E+N+ + + G G+NL ++++ + W+ + Sbjct: 516 DGQTVHDERQKSIDEFNKPDSDKFIFMLTTRAGGLGINLTA-ADVVIIYDSDWNPQ---- 570 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ I NT+DE +++R K + +++ + Sbjct: 571 -VDLQAMDRAHRIGQKKQVRVFRFITDNTVDERIIERAEMKLHLDSIVIQQGR 622 >gi|291408171|ref|XP_002720328.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1-like isoform 3 [Oryctolagus cuniculus] Length = 1049 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 420 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 479 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 480 PPYTTDEHIVNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 539 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I+ +N + + G G+NL ++++ + W+ + Sbjct: 540 DGQTPHEEREEAIEAFNVPNSSKFIFMLSTRAGGLGINL-ASADVVILYDSDWNPQ---- 594 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT++E +++R K + +++ + Sbjct: 595 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 646 >gi|255994014|ref|ZP_05427149.1| SNF2 domain protein [Eubacterium saphenum ATCC 49989] gi|255993682|gb|EEU03771.1| SNF2 domain protein [Eubacterium saphenum ATCC 49989] Length = 467 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 107/205 (52%), Gaps = 14/205 (6%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-----KTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y KF+R + A + + + K LQLA GA+Y ++ K + VHD K+ Sbjct: 260 RAYAKFERGCVLRYLDDTDSASSVMASTAADLSGKLLQLAGGAIYQEDSKDYVTVHDTKL 319 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---DPCTIQEWNEGKIPLLF 113 KAL ++E N II+ Y+F + ARL AF + + I +WN GK+ +L Sbjct: 320 KALTELVEPLNEN-IIIFYNFLHEKARLCNAFSDFKGEVRVFKSGKDIADWNAGKVNILI 378 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 AHPA+ G+GLNLQ GG +++F L E++ R + G + VFV+ L+ + Sbjct: 379 AHPAAMGYGLNLQQGGRRIIWFGLPQSYEQY-----AQANKRLHRQGQQDKVFVHRLVCK 433 Query: 174 NTIDELVLQRLRTKSTIQDLLLNAL 198 T DE VL L K ++Q LL++L Sbjct: 434 GTRDEDVLSALAHKDSMQKYLLSSL 458 >gi|255719682|ref|XP_002556121.1| KLTH0H05566p [Lachancea thermotolerans] gi|238942087|emb|CAR30259.1| KLTH0H05566p [Lachancea thermotolerans] Length = 1106 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 79/224 (35%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 Q+ Y + ++++A N + ++ + N + Sbjct: 375 AMQKRWYKQILEKDLDAVNGANGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTD 434 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+K L+ ++ K + +++ + L L+ Sbjct: 435 EHLVYNSAKLKVLDKLLRKFKEEGSRVLIFSQMSRLLDILEDYCFFRNYEYCRIDGSTAH 494 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N + + G G+NL +++V + W+ + + Sbjct: 495 EDRIEAIDEYNAPDSKKFVFLLTTRAGGLGINLTT-ADVVVLYDSDWNPQA-----DLQA 548 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V V+ L+ N+++E +L+R K + L++ Sbjct: 549 MDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQ 592 >gi|332025493|gb|EGI65656.1| DNA excision repair protein ERCC-6 [Acromyrmex echinatior] Length = 1020 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 59/208 (28%), Gaps = 36/208 (17%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHD-----------------EKIKALEVII--EKA 66 ++ N + + D K+ + ++ + Sbjct: 532 LIALSALRKICNHPDLFLYTREQDSDEDIDLSDEQIEKFGYYKRAGKMTVVRSLLKIWQK 591 Query: 67 NAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 +++ + + + + N+ + Sbjct: 592 QGHRVLLFTQGRQMMHILESLLQREKYIYLRMDGTTAMSQRQQTIQKFNNDSSYFVFLLT 651 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G G+NL G N +V + W+ + R + G + V VY LI T Sbjct: 652 TRVGGLGINLT-GANRVVIYDPDWNPAT-----DAQARERAWRIGQNKQVTVYRLITAGT 705 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 I+E + R K + + +L+ ++ + Sbjct: 706 IEEKIYHRQIFKLLLSNKVLDEPRQRQL 733 >gi|329930625|ref|ZP_08284117.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] gi|328934720|gb|EGG31215.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] Length = 986 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 75/237 (31%), Gaps = 40/237 (16%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 Y + L +Q + + QL + +E + Sbjct: 740 LYDQTVNSLLERMQKLEGIERKGAILAALTQFKQLCDHPALLTKEPLPELPGGGGLLDTE 799 Query: 52 ----HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTL 94 K++ L ++++ ++ + +++ Q Sbjct: 800 AVVNRSAKLERLLSMVKELRDEGERCLIFTQYIGMGEMMRQVLHQELGEPVLYLNGSTPK 859 Query: 95 DKDPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I+++ +P ++ + G GLNL N + F WW+ + Sbjct: 860 GTRDRMIEQFQSRTLPPEEQPNVMILSIKAGGVGLNLTA-ANHVFHFDRWWNPA-----V 913 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 E R + G + V VY I+ T++E + + L +K + D ++ + + + Sbjct: 914 ENQATDRAYRMGQTKDVQVYKFISMGTLEERIDEMLESKQQLSDQVIASSEGWITEL 970 >gi|317129655|ref|YP_004095937.1| SNF2-related protein [Bacillus cellulosilyticus DSM 2522] gi|315474603|gb|ADU31206.1| SNF2-related protein [Bacillus cellulosilyticus DSM 2522] Length = 942 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 76/213 (35%), Gaps = 24/213 (11%) Query: 3 QYHKFQRELYCDLQG-ENIEAFNSASK-TVKCLQLANGAVYYDEEKHWKEVH--DEKIKA 58 Y EL DL +E + + + Q+ N ++ +E + + K Sbjct: 716 LYEAVVEELLEDLPSYSMLEKRSRLFQAITQLKQICNHPAHFTKESNIANMKGRSNKWDT 775 Query: 59 LEVIIEKAN--AAPIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTIQEWN 105 ++ A ++ + +L F ++ I + Sbjct: 776 CMSLLAHNQVEAKQTLLFTQYRYIGNLLQKAIAKELNTTVPFFHGQLSMKDRQNMITSFQ 835 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P++ + G GLNL + ++ + WW+ +E R + G KR Sbjct: 836 AERRYPVMIISLRAGGFGLNLTN-ASEVIHYDRWWNPA-----VEDQATDRVYRIGQKRD 889 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ I++ TI++ + L+ K +Q LL + Sbjct: 890 VTVHTFISEGTIEQKLDNLLQEKKALQQSLLQS 922 >gi|223997284|ref|XP_002288315.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975423|gb|EED93751.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 692 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 78/226 (34%), Gaps = 38/226 (16%) Query: 6 KFQRELYCDLQGENIEAFN----------SASKTVKCLQLANGAVYY--------DEEKH 47 K Q++LY L +IEA + ++ + N + D Sbjct: 267 KMQKQLYKKLLLRDIEAITGKNTSSGKTAILNIVMQLRKCCNHPYLFEGVEDRTLDPLGE 326 Query: 48 WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS----------DLARLQKAFPQGRTLD 95 + K+ ++ ++++ + +++ + Sbjct: 327 HLVENCGKLNMVDKLLKRLKERGSRVLIFTQMTRILDILEDYMVMRGYKYCRIDGNTDYE 386 Query: 96 KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I E+N + G G+NLQ + + + W+ + + Sbjct: 387 DRERGIDEFNAPNSEKFCFILSTRAGGLGINLQT-ADTCILYDSDWNPQA-----DLQAQ 440 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V +Y L+++NT++E +++R + K + +++ + Sbjct: 441 DRCHRLGQKKPVSIYRLVSENTVEEKIVERAQQKLKLDAMVVQQGR 486 >gi|188587761|ref|YP_001921450.1| hypothetical ATP-dependent helicase [Clostridium botulinum E3 str. Alaska E43] gi|188498042|gb|ACD51178.1| hypothetical ATP-dependent helicase [Clostridium botulinum E3 str. Alaska E43] Length = 1050 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 75/218 (34%), Gaps = 25/218 (11%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + +++ L+ + + QL E+ KI Sbjct: 827 KMYKIYVKDIQDKLKQIDSRNNRITIFAYLTRLRQLCLDPSIIVEDYD---GGSGKINVA 883 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 + +I+K N I++ F S L + E+N Sbjct: 884 KELIKKSIKNNHKILLFSQFTSVLHKVCDELKGEQISYLYLDGSTPSKERIRLAHEFNNN 943 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I + + G GLNL ++++ F WW+ IE R + G K V Sbjct: 944 EDIKIFLISLKAGGTGLNLTS-ADMVIHFDPWWNPA-----IEDQATDRAHRIGQKNVVR 997 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL-NALKKETI 203 V LI + +I+E +L K + + ++ LK++ + Sbjct: 998 VIKLITKESIEEKILLLQEDKKALIEDVITGELKEDGL 1035 >gi|328772759|gb|EGF82797.1| hypothetical protein BATDEDRAFT_9561 [Batrachochytrium dendrobatidis JAM81] Length = 912 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 69/219 (31%), Gaps = 27/219 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEK 55 ++Y KF +L+G + ++ N + + K Sbjct: 547 REYEKFLSS--KELKGILEGKLRILAGIDVLRKICNHPDLLERNNADFSANYGAVSRSGK 604 Query: 56 IKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 + ++ ++ K +++ L ++ + + Sbjct: 605 MIVVKALLQMWKRQGHRVLLFCQTRQMLDILELFIKNEGYAYLRMDGSTSIQQRSKIVDC 664 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + G G+NL N ++ F W+ R + G K Sbjct: 665 YNEDESYFVFLLTTKVGGLGINLTS-ANRVIIFDPDWNPSTDM-----QARERAWRLGQK 718 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++V +Y L+ TI+E + R K + + +L ++ Sbjct: 719 KSVTIYRLMTSGTIEEKIYHRQIFKQFLTNKILKDPRQR 757 >gi|145610651|ref|XP_368232.2| hypothetical protein MGG_01012 [Magnaporthe oryzae 70-15] gi|145018030|gb|EDK02309.1| hypothetical protein MGG_01012 [Magnaporthe oryzae 70-15] Length = 1111 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 39/227 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 + QR Y + ++I+A N + ++ + N + Sbjct: 423 EMQRTWYQKILEKDIDAVNGANGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ +++ KA + +++ + L L+ G Sbjct: 483 EHLVYNSGKMVVLDKLLKRLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRIDGGTAH 542 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N+ + + G G+NL +I++ F W+ + + Sbjct: 543 EDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQA-----DLQA 596 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G + V+VY + NTI+E VL+R K + L++ + Sbjct: 597 MDRAHRIGQTKQVYVYRFLVDNTIEEKVLERAAQKLHLDRLVIQQGR 643 >gi|255718981|ref|XP_002555771.1| KLTH0G17028p [Lachancea thermotolerans] gi|238937155|emb|CAR25334.1| KLTH0G17028p [Lachancea thermotolerans] Length = 1000 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 75/242 (30%), Gaps = 46/242 (19%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-------------- 48 Y + L ++ + +L N Sbjct: 683 LYEHMLKSRDIKLLVKDAKHTQPLKHIGVLKKLCNHPDLLRLPDDIEGSEDLMPEDYQSS 742 Query: 49 ----------KEVHDEK---IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG---- 91 + H K + I+ + I++ ++ L ++K Sbjct: 743 TVSKRGRSELQTWHSGKFSILGRFLHKIKTESDDKIVIISNYTQTLDLIEKMCRSSTYPV 802 Query: 92 ------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 T++K + +N+ + + + G G+NL G N L+ W+ Sbjct: 803 VRLDGTMTINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAA 861 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 Q + R + G K+ F+Y I +I+E + QR K ++ +++ K++ Sbjct: 862 DQ-----QALARVWRDGQKKDCFIYRFICTGSIEEKIYQRQSMKMSLSSCVVDE-KEDVE 915 Query: 204 HV 205 + Sbjct: 916 RL 917 >gi|124803472|ref|XP_001347729.1| PfSNF2L [Plasmodium falciparum 3D7] gi|23495979|gb|AAN35642.1|AE014836_39 PfSNF2L [Plasmodium falciparum 3D7] Length = 1426 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 76/219 (34%), Gaps = 27/219 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DE 54 K Y + L + ++ + N +D + + Sbjct: 567 KLYSDILSKNIDVLNAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLIETSG 626 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ K + +++ L + D+ I Sbjct: 627 KMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDERQVRIN 686 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++NE + + G G+NL +I++ F ++ + ++ + R + G Sbjct: 687 QFNEPNSKYFIFLLSTRAGGIGINLTT-ADIVILFDSDYNPQ-----MDIQAMDRAHRIG 740 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K+ V VY + QN+++E +++R K + L++ K Sbjct: 741 QKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGK 779 >gi|303318849|ref|XP_003069424.1| HSA family protein [Coccidioides posadasii C735 delta SOWgp] gi|240109110|gb|EER27279.1| HSA family protein [Coccidioides posadasii C735 delta SOWgp] Length = 1415 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 79/225 (35%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + D +G ++ ++ +L N ++ + Sbjct: 793 KLYKQLVTHNKMVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEEEMNPGKGTNDL 852 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K + +++ + + ++ D Sbjct: 853 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDD 912 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N+ + G GLNLQ + ++ + W+ + + Sbjct: 913 RSELLRRFNDPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 966 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 967 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1011 >gi|255082205|ref|XP_002508321.1| SNF2 super family [Micromonas sp. RCC299] gi|226523597|gb|ACO69579.1| SNF2 super family [Micromonas sp. RCC299] Length = 776 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 22/185 (11%) Query: 32 CLQLAN--GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK- 86 QL G + K AL ++++ + + ++ + L L+ Sbjct: 580 LHQLCGEQGHLSKLCLPVSAFAEAAKTAALVKLLDEIKSKGSRPLIFSQWKIVLDILEWV 639 Query: 87 ---------AFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFF 135 + + +N + + G GLNL G + ++ Sbjct: 640 LRSRGHVFVRLDGSTDVHERQQICDAFNRPGSEIFAFLLSTRAGGQGLNLT-GADTVIIH 698 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ + I+R R + G R V V+ L+ T+DE ++Q K + +L Sbjct: 699 DCDFNPQ-----IDRQAEDRCHRLGQTRPVTVHRLVTAGTVDERIVQIAERKLDLDAAVL 753 Query: 196 NALKK 200 + K Sbjct: 754 SDTKA 758 >gi|73977786|ref|XP_867138.1| PREDICTED: similar to SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 5 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5) (Sucrose nonfermenting protein 2 homolog) (hSNF2H)... isoform 4 [Canis familiaris] Length = 1040 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|28211487|ref|NP_782431.1| SWF/SNF family helicase [Clostridium tetani E88] gi|28203928|gb|AAO36368.1| SWF/SNF family helicase [Clostridium tetani E88] Length = 1093 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 27/214 (12%) Query: 2 KQYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + ++ + S K QL ++ + + K Sbjct: 867 KVYKAYANYAMELIEKKVKDDEFKKSKIAILSYITKLRQLCLDPTVTMKDYN---GGNGK 923 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQE 103 ++AL ++ ++ I++ F S L +K +++ Sbjct: 924 MEALVDLLLQSIGEGHRILIFSQFTSVLKNIGKRIIKEGIDFSYLDGSIPSEKRMNMVRD 983 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N+GK + + G GLNL ++++ F WW+ +E R + G + Sbjct: 984 FNDGKNSVFLISLKAGGTGLNLTS-ADVVIHFDPWWNPA-----VEDQATDRAHRIGQQN 1037 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V +IA+ TI+E ++ K + L+ Sbjct: 1038 VVEVIKIIAKGTIEEKIILLQEEKKKLISELMGD 1071 >gi|15224228|ref|NP_179466.1| CHR8 (chromatin remodeling 8); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|4185142|gb|AAD08945.1| putative SNF2/RAD54 family DNA repair and recombination protein [Arabidopsis thaliana] gi|330251711|gb|AEC06805.1| DNA excision repair protein E [Arabidopsis thaliana] Length = 1187 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 25/189 (13%) Query: 32 CLQLANGAVYYDEEKHWKEVH------DEKIKALEVII--EKANAAPIIVAYHFNSDLAR 83 ++ N + E + K+K + ++ K +++ L Sbjct: 699 MRKICNHPDLLEREHSHQNPDYGNPERSGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDI 758 Query: 84 LQKAFPQGRTLDKDP----------CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNIL 132 L+ + I E+N + + G G NL G N + Sbjct: 759 LESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSEDMFVFVLTTKVGGLGTNLT-GANRV 817 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + F W+ R + G K+ V VY LI + TI+E V R K + + Sbjct: 818 IIFDPDWNPSNDM-----QARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTN 872 Query: 193 LLLNALKKE 201 +L ++ Sbjct: 873 KILKNPQQR 881 >gi|50309923|ref|XP_454975.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644110|emb|CAH00062.1| KLLA0E22617p [Kluyveromyces lactis] Length = 1033 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 64/215 (29%), Gaps = 33/215 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVY----------YDEEKHWKEVHDEKIKALEVII 63 +L ++ N Y++ + K++ ++ ++ Sbjct: 571 ELMKIRKGKRQVLYGIDILRKICNHPDLLDLKRKKMNDYEDADYGNPARSGKMQVVKQLL 630 Query: 64 --EKANAAPIIVAYHFNSDLARLQKAFPQGRTL---------------DKDPCTIQEWNE 106 + ++ L LQ+ + ++N Sbjct: 631 LLWHSQGHKTLLFTQSRQMLDILQEFISYKDPELSDLKFLRMDGTTNIGSRQSLVDKFNN 690 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + G G+NL G N ++ F W+ R + G KR V Sbjct: 691 EPYDVFLLTTRVGGLGINLT-GANRIIIFDPDWNPSTDM-----QARERAWRIGQKREVT 744 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +Y L+ +I+E + R K + + +L K++ Sbjct: 745 IYRLMIAGSIEEKIYHRQIFKQFLSNKILKDPKQK 779 >gi|228213|prf||1718318A GAM1 gene Length = 1703 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA----SKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 Y + + + +N + ++ ++ ++ N ++E + Sbjct: 1022 MYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEAQINPTRETNDD 1081 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K +++ + + ++ D+ Sbjct: 1082 IWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDE 1141 Query: 97 DPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1142 RSELLRLFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 1195 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E++L+R K I ++ A K Sbjct: 1196 RAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGK 1240 >gi|293401290|ref|ZP_06645434.1| HepA/SNF2 family protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305416|gb|EFE46661.1| HepA/SNF2 family protein [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 1075 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 62/193 (32%), Gaps = 21/193 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIV 73 +G S + QL E KI A I +A+ +++ Sbjct: 874 KGFENSKIMVLSMLTRLRQLCCDPRLLYENYQGVG---NKINACMEFIENCRASGKKVLL 930 Query: 74 AYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 F S L + + +N P+ + G GL Sbjct: 931 FSQFTSLLSLIEKELKQREIDYYLLKGSTPKVQRQQYVNAFNVDATPVFLISLKAGGTGL 990 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL +++ F WW++ R + G V V LIA++TI+E ++ Sbjct: 991 NLTS-AEVVIHFDPWWNVSAQ-----NQATDRAYRIGQHNNVQVVKLIAKDTIEEKIMHL 1044 Query: 184 LRTKSTIQDLLLN 196 K + D +++ Sbjct: 1045 QELKQDLSDSIIH 1057 >gi|313898599|ref|ZP_07832134.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] gi|312956483|gb|EFR38116.1| SNF2 family N-terminal domain protein [Clostridium sp. HGF2] Length = 1077 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 61/188 (32%), Gaps = 21/188 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN 78 S + QL E + KI A I + + +++ F Sbjct: 881 SKIMILSMLTRLRQLCCDPRLLYENYNGIG---AKISACMEFIESCRESGKKVLLFSQFT 937 Query: 79 SDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 S L + + +N P+ + G GLNL Sbjct: 938 SLLSLLEKELIRQDIPYYLLKGSTPKLQRQQLVNSFNSDDTPIFLISLKAGGTGLNLTS- 996 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 +++ F WW++ R + G V V LIA++TI+E ++Q K Sbjct: 997 AEVVIHFDPWWNVSAQ-----NQATDRAYRIGQHNNVQVVKLIAKDTIEEKIMQLQSLKQ 1051 Query: 189 TIQDLLLN 196 + D +++ Sbjct: 1052 DLSDSIIH 1059 >gi|160880712|ref|YP_001559680.1| non-specific serine/threonine protein kinase [Clostridium phytofermentans ISDg] gi|160429378|gb|ABX42941.1| Non-specific serine/threonine protein kinase [Clostridium phytofermentans ISDg] Length = 1069 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 78/212 (36%), Gaps = 23/212 (10%) Query: 2 KQY----HKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + ++Y ++ +G + + Q+ + +E + Sbjct: 847 KVYVSYLAEVRNDIYSEIATKGIEKSQMKILAALTRLRQICCHPSTFLDEYDGGSGKLD- 905 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWN 105 + + AN I++ F S L + + + ++ +N Sbjct: 906 LLLELIEEALANDHRILIFSQFTSMLKIMEAELKKLSVSYFYLEGSTPITERNDFVKRFN 965 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ + + G GLNL G + ++ + WW+ +E R + G K V Sbjct: 966 AGEGSIFLISLKAGGTGLNL-VGADTVIHYDPWWNPA-----VEEQATDRVYRIGQKNNV 1019 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V L+ +NTI+E + + + K + D ++ + Sbjct: 1020 HVIKLLTKNTIEEKIFKLQKKKKELSDSIIQS 1051 >gi|114596225|ref|XP_001144256.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 1 [Pan troglodytes] Length = 1013 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|224098058|ref|XP_002192409.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Taeniopygia guttata] Length = 1189 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 87/245 (35%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 532 VKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 591 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 + K+ L+ ++ K + +++ L L+ Sbjct: 592 PPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRL 651 Query: 91 -GRTLDKDPCT-------------IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 G+T ++ I +N + + G G+NL ++++ Sbjct: 652 DGQTPHEEREVGKLYVNKKSLSEAIDTFNAPNSSKFIFMLSTRAGGLGINL-ATADVVIL 710 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 711 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 765 Query: 195 LNALK 199 + + Sbjct: 766 IQQGR 770 >gi|328861152|gb|EGG10256.1| hypothetical protein MELLADRAFT_94587 [Melampsora larici-populina 98AG31] Length = 984 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 82/225 (36%), Gaps = 34/225 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTV----KCLQLANGAVYYD-------EEKHWK 49 +K+ + +++ ++ E + NS ++ + + ++ + E Sbjct: 424 VKEVKELSKQISYAIESETKDTSNSYTRLMNLLIQLRKVCDHPYLMPNSEPEPFEVAEHV 483 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKD 97 K+ L+ ++ I++ F L L+ G + + Sbjct: 484 VEASNKLILLDKLLTSLIPQGKRILIFSGFTRMLDILEDFLNLRSIGFLRLDGGTSRPRR 543 Query: 98 PCTIQEWNEG-----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I+ + P+ ++ G G+NL + +V + W+ + ++ Sbjct: 544 SLNIRLFQNSFQGQLPKPVFLISTSAGGLGINLTA-ADTVVLYDSSWNPQ-----VDIQA 597 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G R V VY LI +++E +L RLR K + ++ A Sbjct: 598 IARAHRIGQTRPVTVYRLICAASVEEQMLSRLRKKLYLSLKIMEA 642 >gi|221054017|ref|XP_002261756.1| SNF2-family protein [Plasmodium knowlesi strain H] gi|193808216|emb|CAQ38919.1| SNF2-family protein, putative [Plasmodium knowlesi strain H] Length = 3207 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 77/222 (34%), Gaps = 27/222 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEVH------D 53 ++ Y + Y L + A NS ++ ++ N E E Sbjct: 1648 IEFYKNILTKNYEQLAKASGGAKNSLQNICMELKKVCNHPFLCCEPVDKDEYKERLVYSS 1707 Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 KI LE ++ + +++ L L + + + Sbjct: 1708 GKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRGFKHQRLDGTMSKEMRKKAM 1767 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G G+NL + ++ + W+ + + R + Sbjct: 1768 NHFNSKNSDDFVFLLSTKAGGLGINLTS-ADTVIIYDSDWNPQN-----DLQAGARAHRI 1821 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V +Y L+ +++I++ +L+R + K + L++ L K+ Sbjct: 1822 GQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKK 1863 >gi|2213862|gb|AAC47719.1| PfSNF2L [Plasmodium falciparum] Length = 1422 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 76/219 (34%), Gaps = 27/219 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DE 54 K Y + L + ++ + N +D + + Sbjct: 564 KLYSDILSKNIDVLNAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLIETSG 623 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ K + +++ L + D+ I Sbjct: 624 KMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDERQVRIN 683 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++NE + + G G+NL +I++ F ++ + ++ + R + G Sbjct: 684 QFNEPNSKYFIFLLSTRAGGIGINLTT-ADIVILFDSDYNPQ-----MDIQAMDRAHRIG 737 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K+ V VY + QN+++E +++R K + L++ K Sbjct: 738 QKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGK 776 >gi|301777862|ref|XP_002924349.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Ailuropoda melanoleuca] Length = 1052 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|301166647|emb|CBW26223.1| putative helicase [Bacteriovorax marinus SJ] Length = 1063 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 70/209 (33%), Gaps = 21/209 (10%) Query: 2 KQYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y++ + L + + ++ Q A + E + Sbjct: 841 EIYNELKEHYRSKLMDKVQKVGIKKSKVHILEALLRLRQAACHPGLINPLYLDSESAKLE 900 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNE 106 I ++ + + +V F L ++ ++ G+T +++ + Sbjct: 901 ILVEKLKVIAKSGEKALVFSQFTQFLKIVQNRLKAEGIEFSYLDGQTRNREEVIDEFKEV 960 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + G GLNL WW+ Q I+RI + G K V+ Sbjct: 961 PDKTAFLISLKAGGFGLNLTQ-AKYCFLLDPWWNPAVEGQAIDRI-----HRIGQKSEVY 1014 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 L+++ T++E +++ + K + D L Sbjct: 1015 AIKLLSEGTVEEKIIEMQKRKKKLVDNLF 1043 >gi|327273932|ref|XP_003221733.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Anolis carolinensis] Length = 1036 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 393 VKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPG 452 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + I++ L L+ Sbjct: 453 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRILIFSQMTRVLDILEDYCMWRNYEYCRL 512 Query: 93 ----TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 513 DGQTPHDERQASINAYNEPGSSKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 567 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 568 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 619 >gi|298387126|ref|ZP_06996680.1| Snf2 family protein [Bacteroides sp. 1_1_14] gi|298260276|gb|EFI03146.1| Snf2 family protein [Bacteroides sp. 1_1_14] Length = 1027 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 67/206 (32%), Gaps = 21/206 (10%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + L L + F+ + ++ QLA + E+I Sbjct: 810 YEQEKNSLRNILLQQPENRDRYHMFSILNGILRLRQLACHPQLIFPDFDGISGKTEQIID 869 Query: 59 LEVIIEKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKI 109 + ++ +++ F L + A G T ++ + + Sbjct: 870 TFDTL-RSEGHKVLIFSSFVRHLEILAEVFRQRGWKYALLTGSTNNRPSEIAHFTEQKDV 928 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL + + WW+ E + R + G + V Y Sbjct: 929 QAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAYR 982 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I QN+I+E +LQ K + + + Sbjct: 983 FITQNSIEEKILQLQEDKRRLAETFI 1008 >gi|297293442|ref|XP_002804257.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Macaca mulatta] Length = 1052 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|299117330|emb|CBN75290.1| similar to helicase, lymphoid-specific isoform 9 [Ectocarpus siliculosus] Length = 944 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 72/219 (32%), Gaps = 32/219 (14%) Query: 5 HKFQRELYCDLQGENIEAFNS-ASKTVK---------CLQLANGA--VYYDEEKHWKEVH 52 + + ++ L +N SK K Q+ +G + + Sbjct: 703 RRLKSDVLKQLVAKNESLEKVPLSKVAKEVSGYSDFDLHQVCSGFDSLKHLCLSEETLFT 762 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPC 99 K++ L ++ + + I++ + + + + Sbjct: 763 SAKMERLRALLPQLVSEGHRILLFSQWTRLLDLLEVLLGESMGMTFCRLDGSTPVSERKA 822 Query: 100 TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ + IP+ + G G+NL + ++ + ++ E +R R + Sbjct: 823 LIDKFGADTSIPVFLLSTRAGGLGINLTA-ADTVILHDVDFNPEN-----DRQAEDRCHR 876 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V ++A T+DE + K + +LN Sbjct: 877 IGQTKPVTVIRMVAAGTVDEDIYLMGERKKEVNQRVLND 915 >gi|124515798|gb|EAY57307.1| putative helicase, Snf2 family [Leptospirillum rubarum] Length = 1049 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 72/223 (32%), Gaps = 28/223 (12%) Query: 3 QYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + E+ + N + ++ K K Sbjct: 817 AYRAILLMGKEEIRAVSKDRKTFRMNMLALLLRLRLFCCHPDLVPNPKGISVPAPAKFLE 876 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE 106 I +A + I++ F L L+ L + ++E+ Sbjct: 877 TLAKIREALADGHRILLFSQFTGMLDILENALLKDGILFSRLDGKTPLKERQRLVEEFQR 936 Query: 107 ---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G + + + G GL L + + + WW+ + +E R + G KR Sbjct: 937 QKPGSPSVFLSSLKAGGVGLTLTN-ADFVFHYDPWWNPQ-----VENQATDRSHRIGQKR 990 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA---LKKETI 203 VFVY ++ + T++E V K + DL++ + +E + Sbjct: 991 PVFVYRMLTRGTVEEKVKALKEEKLELFDLVMGEGQPVAQEWL 1033 >gi|255955967|ref|XP_002568736.1| Pc21g17380 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590447|emb|CAP96635.1| Pc21g17380 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1399 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 K Y + + D +G ++ ++ +L N ++ + Sbjct: 787 KLYKQLVTHNKMAVTDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEPVEDQMNPTRMSNDL 846 Query: 54 -----EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 847 LWRTAGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 906 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++++N + G GLNLQ + ++ + W+ + + Sbjct: 907 RSDLLRQFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 960 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 961 RAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1005 >gi|220914252|ref|YP_002489561.1| non-specific serine/threonine protein kinase [Arthrobacter chlorophenolicus A6] gi|219861130|gb|ACL41472.1| Non-specific serine/threonine protein kinase [Arthrobacter chlorophenolicus A6] Length = 1160 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 71/210 (33%), Gaps = 22/210 (10%) Query: 2 KQYH---KFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + +R+ L + N F QL+ D V K+ Sbjct: 940 KVYQTHLQRERQKILGLIEDVNKNRFTIFQSLTLLRQLSLDVSLVDPA--LSAVRSSKLD 997 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEG 107 L +E A ++ F L ++++ + E+ G Sbjct: 998 VLFEQLEDLVAEGHRALIFSQFTGFLGKVRERLDEEEIEYCYLDGGTRNRADVVSEFKNG 1057 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G GLNL + + WW+ E V R + G R V V Sbjct: 1058 SAPVFLISLKAGGFGLNLTE-ADYVFLLDPWWNPAS-----EAQAVDRTHRIGQARNVMV 1111 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y L+A++TI+E V+ KS + ++ Sbjct: 1112 YRLVAKDTIEEKVMALKTRKSQLFADVMEG 1141 >gi|126313652|ref|XP_001368284.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 982 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 71/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + E Sbjct: 373 KYYKALLMKDLDAFENETAKKVKLQNILSQLRKCVGHPYLFDGVEPEPFEIGDHLIEASG 432 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ +++ L LQ ++ I+ Sbjct: 433 KLHLLDKLLSFLYTRHHRVLLFSQMTHMLDILQDYMDYRGYSYERLDGSVRGEERHLAIK 492 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + + R + G K Sbjct: 493 NFGQQPIFVFLLSTKAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAIARAHRIGQK 546 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V + LI ++T++E++ +R +K + ++ Sbjct: 547 KSVKIIRLIGRDTVEEVIYRRAASKLRLTSAIIEG 581 >gi|253568895|ref|ZP_04846305.1| Snf2 family helicase [Bacteroides sp. 1_1_6] gi|251840914|gb|EES68995.1| Snf2 family helicase [Bacteroides sp. 1_1_6] Length = 1027 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 67/206 (32%), Gaps = 21/206 (10%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + L L + F+ + ++ QLA + E+I Sbjct: 810 YEQEKNSLRNILLQQPENRDRYHMFSILNGILRLRQLACHPQLIFPDFDGISGKTEQIID 869 Query: 59 LEVIIEKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKI 109 + ++ +++ F L + A G T ++ + + Sbjct: 870 TFDTL-RSEGHKVLIFSSFVRHLEILAEVFRQRGWKYALLTGSTNNRPSEIAHFTEQKDV 928 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL + + WW+ E + R + G + V Y Sbjct: 929 QAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAYR 982 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I QN+I+E +LQ K + + + Sbjct: 983 FITQNSIEEKILQLQEDKRRLAETFI 1008 >gi|35505451|gb|AAH57567.1| Chromodomain helicase DNA binding protein 1-like [Mus musculus] gi|38571574|gb|AAH62966.1| Chromodomain helicase DNA binding protein 1-like [Mus musculus] Length = 900 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 282 KYYKAILMKDLDAFENETSKKVKLQNILTQLRKCVDHPYLFDGVEPEPFEVGEHLIEASG 341 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 342 KLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 401 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + I + + G G+NL + ++F ++ + + R + G Sbjct: 402 NFGNQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 455 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 456 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEG 490 >gi|325651836|ref|NP_003592.3| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Homo sapiens] gi|57014128|sp|O60264|SMCA5_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5; Short=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A5; AltName: Full=Sucrose nonfermenting protein 2 homolog; Short=hSNF2H gi|2967452|dbj|BAA25173.1| hSNF2H [Homo sapiens] gi|18606276|gb|AAH23144.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Homo sapiens] gi|119625476|gb|EAX05071.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Homo sapiens] gi|168275690|dbj|BAG10565.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [synthetic construct] gi|325463895|gb|ADZ15718.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [synthetic construct] Length = 1052 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|29348762|ref|NP_812265.1| Snf2 family helicase [Bacteroides thetaiotaomicron VPI-5482] gi|29340668|gb|AAO78459.1| Snf2 family helicase [Bacteroides thetaiotaomicron VPI-5482] Length = 1027 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 67/206 (32%), Gaps = 21/206 (10%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + L L + F+ + ++ QLA + E+I Sbjct: 810 YEQEKNSLRNILLQQPENKDRYHMFSILNGILRLRQLACHPQLIFPDFDGVSGKTEQIID 869 Query: 59 LEVIIEKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKI 109 + ++ +++ F L + A G T ++ + + Sbjct: 870 TFDTL-RSEGHKVLIFSSFVRHLEILAEVFRQRGWKYALLTGSTNNRPSEIAHFTEQKDV 928 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL + + WW+ E + R + G + V Y Sbjct: 929 QAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAYR 982 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I QN+I+E +LQ K + + + Sbjct: 983 FITQNSIEEKILQLQEDKRRLAETFI 1008 >gi|206602042|gb|EDZ38524.1| Putative helicase, Snf2 family [Leptospirillum sp. Group II '5-way CG'] Length = 1049 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 72/223 (32%), Gaps = 28/223 (12%) Query: 3 QYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + E+ + N + ++ K K Sbjct: 817 AYRAILLMGKEEIRAVSKDRKTFRMNMLALLLRLRLFCCHPDLVPNPKGISVPAPAKFLE 876 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNE 106 I +A + I++ F L L+ L + ++E+ Sbjct: 877 TLAKIREALADGHRILLFSQFTGMLDILENALLKDGILFSRLDGKTPLKERQRLVEEFQR 936 Query: 107 ---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G + + + G GL L + + + WW+ + +E R + G KR Sbjct: 937 QKPGSPSVFLSSLKAGGVGLTLTN-ADFVFHYDPWWNPQ-----VENQATDRSHRIGQKR 990 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA---LKKETI 203 VFVY ++ + T++E V K + DL++ + +E + Sbjct: 991 PVFVYRMLTRGTVEEKVKALKEEKLELFDLVMGEGQPVAQEWL 1033 >gi|114596221|ref|XP_517459.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 5 [Pan troglodytes] gi|114596223|ref|XP_001144488.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 4 [Pan troglodytes] Length = 1052 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|51316190|sp|O12944|RAD54_CHICK RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Putative recombination factor GdRad54; AltName: Full=RAD54 homolog gi|1905887|gb|AAB54115.1| putative recombination factor GdRad54 [Gallus gallus] Length = 733 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 81/234 (34%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y F ++ +L+ I + S +L N ++ +E Sbjct: 411 ELYKNFLKQAKPVEELKEGKINVSS-LSSITSLKKLCNHPALIYDKCVEEEEGFMGALDL 469 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ + + +++ ++ L +K Sbjct: 470 FPAGYSTKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRNRRYLY 529 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 530 VRLDGTMSIKKRAKVVERFNSPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 588 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 589 -----DEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDE 637 >gi|148706991|gb|EDL38938.1| chromodomain helicase DNA binding protein 1-like [Mus musculus] Length = 900 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 282 KYYKAILMKDLDAFENETAKKVKLQNILTQLRKCVDHPYLFDGVEPEPFEVGEHLIEASG 341 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 342 KLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 401 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + I + + G G+NL + ++F ++ + + R + G Sbjct: 402 NFGNQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 455 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 456 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEG 490 >gi|293342854|ref|XP_002725339.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like [Rattus norvegicus] Length = 1046 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 208 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 267 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 268 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 327 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 328 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 382 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 383 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 434 >gi|187779662|ref|ZP_02996135.1| hypothetical protein CLOSPO_03258 [Clostridium sporogenes ATCC 15579] gi|187773287|gb|EDU37089.1| hypothetical protein CLOSPO_03258 [Clostridium sporogenes ATCC 15579] Length = 1077 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 84/231 (36%), Gaps = 37/231 (16%) Query: 2 KQY----HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + E Y +++ S + Q+ + E E + K Sbjct: 851 KVYASFAESAKEEFYKEIKERGFNKSKIKILSIITRLRQICCDPSTFIENY---EGSNGK 907 Query: 56 IKALEVIIEKA--NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 I+ L I+ I++ F S L + +++ Sbjct: 908 IETLLDIVNSNINEGHKILLFSQFTSVLKNISEVFKANNINYLYLDGSTKANVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ +E R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQASDRAHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDE----------LVLQRLRTKSTIQDLLLNALKKETIH 204 V V LIA+ TI+E ++ ++ K+ +++LL+ + +E I Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVIDKNLGEEVLLSNMAEEEIE 1072 >gi|66809969|ref|XP_638708.1| chromo domain-containing protein [Dictyostelium discoideum AX4] gi|60467321|gb|EAL65353.1| chromo domain-containing protein [Dictyostelium discoideum AX4] Length = 1917 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 77/224 (34%), Gaps = 31/224 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 K Y + + +L E + + + N Y + E+ Sbjct: 1002 KYYKWILTKNFQELNKGKGEKTTLLNIMTELKKTCNHPYLYQNARDECELGAKDLLDSMI 1061 Query: 53 --DEKIKALEVIIE--KANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDP 98 K+ L+ ++ K +++ L + + +K Sbjct: 1062 RASGKLVLLDKLLIRLKETGHRVLIFSQMVRMLDILADYLKGRSFQFQRLDGSMSREKRS 1121 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N P + G G+NL + ++ F W+ + + R Sbjct: 1122 QAMDRFNAVDSPDFCFLLSTKAGGLGINL-STADTVIIFDSDWNPQN-----DLQAEARA 1175 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K V +Y L+++++++E +L+R + K + L++ ++K Sbjct: 1176 HRIGQKNHVNIYRLVSKSSVEEDILERAKQKMVLDHLVIQTMEK 1219 >gi|297744167|emb|CBI37137.3| unnamed protein product [Vitis vinifera] Length = 1116 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 25/189 (13%) Query: 32 CLQLANGAVYYDEEKHWKEVH------DEKIKALEVII--EKANAAPIIVAYHFNSDLAR 83 ++ N + E ++ K+K + ++ K +++ L Sbjct: 686 MRKICNHPDLLEREHAYQNPDYGNPERSGKMKVVAHVLKGWKEQGHRVLLFAQTQQMLDI 745 Query: 84 LQKAFPQGRTLDKDP----------CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNIL 132 L+ G + + I E+N+ + + G G NL G N + Sbjct: 746 LENFLIAGGYVYRRMDGFTPIKHRMALIDEFNDSDDVFIFILTTKVGGLGTNLT-GANRV 804 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + W+ R + G R V VY LI + TI+E V QR K + + Sbjct: 805 IIYDPDWNPSTDM-----QARERAWRIGQTRDVTVYRLITRGTIEEKVYQRQIYKHFLTN 859 Query: 193 LLLNALKKE 201 +L +++ Sbjct: 860 KILKNPQQK 868 >gi|110004998|emb|CAK99329.1| hypothetical dna/rna helicase protein [Spiroplasma citri] Length = 1098 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 28/214 (13%) Query: 2 KQYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + ++ + K Q+ D++ + K Sbjct: 872 KIYAAYANAAREEINKILTAGQYQQNRLKIFATLTKLRQICCDPSILDKKYQNE---SAK 928 Query: 56 IKALEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQE 103 + AL I + + I++ F ++ + ++ Sbjct: 929 LDALRDIFDDLAGSGHKILIFSQFTTVLKRIKAIVEEIGLQYFYLDGKTRSESRVLMTEK 988 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + I + + G GLNL ++++ F WW+ +E R + G + Sbjct: 989 FNEDKIINVFLISLKAGGVGLNLTA-ADVVIHFDPWWNPS-----VENQATDRAHRFGQQ 1042 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E +L K + + +LN Sbjct: 1043 NTVQVIKLIAKGTIEEKILTIQNNKQEVINAVLN 1076 >gi|71033631|ref|XP_766457.1| DNA-dependent ATPase [Theileria parva strain Muguga] gi|68353414|gb|EAN34174.1| DNA-dependent ATPase, putative [Theileria parva] Length = 1253 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 32/233 (13%), Positives = 84/233 (36%), Gaps = 35/233 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT----VKCLQLANGAVYY--------DEEKHWK 49 + Y R+ +L ++ + ++ + N + D Sbjct: 452 QLYRDLLRKNVPELGTDDSTKSGIHVQLLNLAMQLRKACNHPYLFEGYEDRNEDPFGEHV 511 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ ++ +I + N++ I++ L L+ + + Sbjct: 512 VQNSGKLCLVDKLIPRLLGNSSRILIFSQMARMLDILEDYCRMRNYLYFRIDGNTSGEDR 571 Query: 98 PCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N + + + G G+NL ++++ + W+ + ++ + R Sbjct: 572 DYQISSFNHPESKVNIFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAIDR 625 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK---KETIHV 205 + G + V+VY L+ Q TI+E +++R K + ++ + KE + + Sbjct: 626 AHRIGQLKPVYVYRLVHQYTIEEKIIERATLKLQLDTAVIQHGRLAQKELLQM 678 >gi|47217344|emb|CAG11049.1| unnamed protein product [Tetraodon nigroviridis] Length = 985 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 89/233 (38%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEEKH- 47 +K Y K QRE Y + ++I+ NS + ++ + N +D + Sbjct: 342 IKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 401 Query: 48 -------WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 V+ K+ L+ ++ K + +++ L L+ Sbjct: 402 PPYTTDLHLVVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRL 461 Query: 93 ----TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +I +NE + + G G+NL ++++ + W+ + Sbjct: 462 DGQTPHEERQISINAFNEPNSSKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 516 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G ++ V V+ I +NT++E +++R K + +++ + Sbjct: 517 -VDLQAMDRAHRIGQQKQVRVFRYITENTVEERIVERAEMKLRLDSIVIQQGR 568 >gi|119181968|ref|XP_001242147.1| hypothetical protein CIMG_06043 [Coccidioides immitis RS] Length = 1410 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 79/225 (35%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + D +G ++ ++ +L N ++ + Sbjct: 788 KLYKQLVTHNKMVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEEEMNPGKGTNDL 847 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K + +++ + + ++ D Sbjct: 848 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDD 907 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N+ + G GLNLQ + ++ + W+ + + Sbjct: 908 RSELLRRFNDPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 961 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 962 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1006 >gi|74227041|dbj|BAE38319.1| unnamed protein product [Mus musculus] Length = 883 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 282 KYYKAILMKDLDAFENETAKKVKLQNILTQLRKCVDHPYLFDGVEPEPFEVGEHLIEASG 341 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 342 KLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 401 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + I + + G G+NL + ++F ++ + + R + G Sbjct: 402 NFGNQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 455 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 456 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEG 490 >gi|302673648|ref|XP_003026510.1| hypothetical protein SCHCODRAFT_258840 [Schizophyllum commune H4-8] gi|300100193|gb|EFI91607.1| hypothetical protein SCHCODRAFT_258840 [Schizophyllum commune H4-8] Length = 1361 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 80/226 (35%), Gaps = 34/226 (15%) Query: 2 KQYHKFQR-ELYCDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEV------ 51 + Y + ++ ++ + +G+ ++ ++ +DE + Sbjct: 739 QLYKQMKKYKMIANGKGKGQSTGGVKGLSNELMQLRKICQHPFLFDEVEDVVNTTQLIDE 798 Query: 52 ----HDEKIKALEVIIEK--ANAAPIIVAYH----------FNSDLARLQKAFPQGRTLD 95 K++ L I+ K A +++ + F + G + Sbjct: 799 KIIRSSGKVELLSRILPKLFATDHRVLIFFQMTKVMDIMEDFLKMMGWKYLRLDGGTKTE 858 Query: 96 KDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +Q +N + I + + G GLNLQ + ++ F W+ + Sbjct: 859 ERASYVQLFNAKDSDIRVFILSTRAGGLGLNLQT-ADTVIIFDSDWNP-----HADLQAQ 912 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G +AV + I + +++E + QR R K I ++ A + Sbjct: 913 DRAHRIGQTKAVLILRFITEKSVEEAMYQRARYKLDIDGKVIQAGR 958 >gi|71649857|ref|XP_813640.1| transcription activator [Trypanosoma cruzi strain CL Brener] gi|70878541|gb|EAN91789.1| transcription activator, putative [Trypanosoma cruzi] Length = 1092 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 74/224 (33%), Gaps = 32/224 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDE--------EKHWKEVH 52 K Y + L + + +S + + ++ N D H Sbjct: 392 KWYMHVLAKDAEALNKASGGSMSSLTNIMMNLRKVINHPYMMDGGEEGPPFITDERIVKH 451 Query: 53 DEKIKALEVIIE-----KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 K+ L+ ++ K +++ F + L L+ + Sbjct: 452 SGKMMILDKLLYRLRREKEEKHKVLIFSQFTTMLDILEDYCGMRGFRVCRIDGNTSGYDR 511 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + + G G+NLQ N +V + W+ + ++ R Sbjct: 512 DAQMAAFNSPNSDYFIFLLSTRAGGLGINLQA-ANHVVIYDSDWNPQ-----MDLQAQDR 565 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G KR V VY I + T++E + +R K + +++ + Sbjct: 566 AHRIGQKRVVRVYRFITEGTVEEKIYRRALKKLYLDAMVVQHGR 609 >gi|13386044|ref|NP_080815.1| chromodomain-helicase-DNA-binding protein 1-like [Mus musculus] gi|81916841|sp|Q9CXF7|CHD1L_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like gi|12852350|dbj|BAB29376.1| unnamed protein product [Mus musculus] gi|30931375|gb|AAH52385.1| Chromodomain helicase DNA binding protein 1-like [Mus musculus] Length = 900 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 282 KYYKAILMKDLDAFENETAKKVKLQNILTQLRKCVDHPYLFDGVEPEPFEVGEHLIEASG 341 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 342 KLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 401 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + I + + G G+NL + ++F ++ + + R + G Sbjct: 402 NFGNQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 455 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 456 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIEG 490 >gi|320034578|gb|EFW16522.1| SNF2-family ATP-dependent chromatin remodeling factor snf21 [Coccidioides posadasii str. Silveira] Length = 1410 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 79/225 (35%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + D +G ++ ++ +L N ++ + Sbjct: 788 KLYKQLVTHNKMVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEEEMNPGKGTNDL 847 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K + +++ + + ++ D Sbjct: 848 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDD 907 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N+ + G GLNLQ + ++ + W+ + + Sbjct: 908 RSELLRRFNDPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 961 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 962 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1006 >gi|40254124|ref|NP_444354.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Mus musculus] gi|55977469|sp|Q91ZW3|SMCA5_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5; AltName: Full=Sucrose nonfermenting protein 2 homolog; Short=mSnf2h gi|16551316|gb|AAL25793.1|AF375046_1 ATP-dependent chromatin remodeling protein SNF2H [Mus musculus] gi|31419851|gb|AAH53069.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Mus musculus] Length = 1051 Score = 104 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 409 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 468 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 469 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 528 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 529 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 583 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 584 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 635 >gi|149698191|ref|XP_001502076.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Equus caballus] Length = 1052 Score = 104 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NSA K ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|190348672|gb|EDK41171.2| hypothetical protein PGUG_05269 [Meyerozyma guilliermondii ATCC 6260] Length = 593 Score = 104 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 82/227 (36%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYC-----DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--- 53 K Y + + D G+ I N+ ++ ++ ++ N Y+E ++ Sbjct: 244 KLYQQMLKYNLLFSSNPDGDGKPIAIKNTNNQIMQLRKICNHPFVYEEVENMINPTADTN 303 Query: 54 -------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARL----------QKAFPQGRTL 94 K + L+ I+ K +++ + S + + Sbjct: 304 DEIWRVAGKFELLDRILPKLKATGHRVLIFFQMTSIMNIMEDFLRLRDLKYMRLDGATKA 363 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +NE + G GLNLQ + ++ F W+ + + Sbjct: 364 DDRTGLLKLFNEENSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQ-----DLQA 417 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++++E++L+R K I ++ A K Sbjct: 418 QDRAHRIGQKNEVRIIRLITEDSVEEMILERAHAKLEIDGKVIQAGK 464 >gi|119612874|gb|EAW92468.1| INO80 complex homolog 1 (S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 1313 Score = 104 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 811 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 870 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 871 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 929 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 930 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 979 >gi|322827781|gb|EFZ31794.1| transcription activator, putative [Trypanosoma cruzi] Length = 1087 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 74/224 (33%), Gaps = 32/224 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDE--------EKHWKEVH 52 K Y + L + + +S + + ++ N D H Sbjct: 387 KWYMHVLAKDAEALNKASGGSMSSLTNIMMNLRKVINHPYMMDGGEEGPPFITDERIVKH 446 Query: 53 DEKIKALEVIIE-----KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 K+ L+ ++ K +++ F + L L+ + Sbjct: 447 SGKMMILDKLLYRLRREKEEKHKVLIFSQFTTMLDILEDYCGMRGFRVCRIDGNTSGYDR 506 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + + G G+NLQ N +V + W+ + ++ R Sbjct: 507 DAQMAAFNSPNSDYFIFLLSTRAGGLGINLQA-ANHVVIYDSDWNPQ-----MDLQAQDR 560 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G KR V VY I + T++E + +R K + +++ + Sbjct: 561 AHRIGQKRVVRVYRFITEGTVEEKIYRRALKKLYLDAMVVQHGR 604 >gi|115959195|ref|XP_001193315.1| PREDICTED: similar to excision repair protein, partial [Strongylocentrotus purpuratus] Length = 953 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 80/232 (34%), Gaps = 42/232 (18%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY----------------- 42 + Y ++ +E L+GE + + + ++ N Sbjct: 263 QVYEEYLASKECNLILRGE----YKVFAGLITLRKICNHPDLVSGGPRIFSHQNLSDEDL 318 Query: 43 -DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--- 96 +E+++ K+ +E ++ K +++ L ++ + + Sbjct: 319 TEEQRYGYYKRAGKMIVVESLLKLWKEQNHRVLLFSQSKQMLDIMEDFVKDRYSYMRMDG 378 Query: 97 ------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I ++N + +I L G G+NL G N ++ + W+ + Sbjct: 379 TTTISSRQPLITKFNSDPRIFLFLLTTRVGGLGVNLT-GANRVIIYDPDWNPST-----D 432 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V +Y L+ +I+E + R K+ + + +L ++ Sbjct: 433 TQARERSWRIGQTKQVTIYRLLTAGSIEEKIYHRQIFKTFLTNRVLKDPRQR 484 >gi|328474032|gb|EGF44843.1| SNF2 family helicase [Listeria monocytogenes 220] Length = 1038 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 68/194 (35%), Gaps = 21/194 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L + E + + Q+ + E + K+ L I+ Sbjct: 851 EKIQADLEASNGNASEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 907 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L ++ + +NEG+ + Sbjct: 908 TARENGKRILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIF 967 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ + LWW+ +E R + G KR V V+ +I Sbjct: 968 LISLKAGGTGLNL-VGADTVILYDLWWNPA-----VEEQATGRAHRIGQKRVVQVFRMIT 1021 Query: 173 QNTIDELVLQRLRT 186 + TI+E + + Sbjct: 1022 KGTIEERIFDLQKK 1035 >gi|150864673|ref|XP_001383607.2| DNA dependent ATPase [Scheffersomyces stipitis CBS 6054] gi|149385929|gb|ABN65578.2| DNA dependent ATPase [Scheffersomyces stipitis CBS 6054] Length = 1067 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 74/229 (32%), Gaps = 37/229 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------EEKHWKEVHD 53 + Y KF +L N ++ N + + V Sbjct: 567 ELYEKFLHS--EELSSILKGRRNVLMGVDILRKICNHPDLVNRDILEHKKNYNYGNPVKS 624 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA------------------FPQGRT 93 K++ L+ ++ ++ ++ L L+K Sbjct: 625 GKMQVLKNLLQLWQSQEHKTLLFCQTRQMLDILEKFVANLRLLDIDHEYFTYLRMDGSTP 684 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + K + ++N + + + G G+NL G + ++ + W+ + Sbjct: 685 IAKRQDLVDKFNSDPNLHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DIQA 738 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ + +Y L+ +I+E + R K+ + + +L K+ Sbjct: 739 RERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQR 787 >gi|253583434|ref|ZP_04860632.1| non-specific serine/threonine protein kinase [Fusobacterium varium ATCC 27725] gi|251834006|gb|EES62569.1| non-specific serine/threonine protein kinase [Fusobacterium varium ATCC 27725] Length = 1022 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 81/213 (38%), Gaps = 17/213 (7%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + +L+ +N + + QL N + + + + + Sbjct: 806 KLYLAYLEKCKKELREKN-NSLEIFVWLTRLRQLCNHPKLFLADYDGES-SKLEALLELL 863 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---------DPCTIQEWNEGKIPLL 112 K+ +++ F L+ +++ P+ T ++ +N G+ + Sbjct: 864 EECKSGGHRVLLFSQFTEMLSIIKENIPKDMTYLYLDGKTKSEHRMELVERFNSGEGDIF 923 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + ++ F WW+ +E R + G + V V+ +IA Sbjct: 924 IISLKAGGSGLNLT-GADTVIHFDPWWN-----SSVENQATDRAYRMGQTKNVNVFKMIA 977 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + TI+E + K + +L+ ++ I + Sbjct: 978 KGTIEEKINIIKDEKEKLIREILDEKQENIISM 1010 >gi|224092566|ref|XP_002309665.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222855641|gb|EEE93188.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1340 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 76/227 (33%), Gaps = 30/227 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 + Y Y L + + ++ +L + + E Sbjct: 551 EYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFRQLLE 610 Query: 53 -DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ L+ ++ K +++ F L L+ + + + Sbjct: 611 TSGKLQLLDKLMVRLKEQGHRVLIYSQFQHMLDLLEDYCTHKKWMYERIDGKVGGAERQV 670 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + + R Sbjct: 671 RIDRFNAKNSSRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAH 724 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G V +Y LI + TI+E ++Q + K ++ L++ LK + I+ Sbjct: 725 RLGQTNKVLIYRLITRGTIEERMMQLTKKKMVLEHLVVGRLKAQNIN 771 >gi|71400983|ref|XP_803224.1| transcription activator [Trypanosoma cruzi strain CL Brener] gi|70865998|gb|EAN81778.1| transcription activator, putative [Trypanosoma cruzi] Length = 1038 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 74/224 (33%), Gaps = 32/224 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDE--------EKHWKEVH 52 K Y + L + + +S + + ++ N D H Sbjct: 413 KWYMHVLAKDAEALNKASGGSMSSLTNIMMNLRKVINHPYMMDGGEEGPPFITDERIVKH 472 Query: 53 DEKIKALEVIIE-----KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 K+ L+ ++ K +++ F + L L+ + Sbjct: 473 SGKMMILDKLLYRLRREKEEKHKVLIFSQFTTMLDILEDYCGMRGFRVCRIDGNTSGYDR 532 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + + G G+NLQ N +V + W+ + ++ R Sbjct: 533 DAQMAAFNSPNSDYFIFLLSTRAGGLGINLQA-ANHVVIYDSDWNPQ-----MDLQAQDR 586 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G KR V VY I + T++E + +R K + +++ + Sbjct: 587 AHRIGQKRVVRVYRFITEGTVEEKIYRRALKKLYLDAMVVQHGR 630 >gi|254586199|ref|XP_002498667.1| ZYRO0G15796p [Zygosaccharomyces rouxii] gi|238941561|emb|CAR29734.1| ZYRO0G15796p [Zygosaccharomyces rouxii] Length = 1651 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 78/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA----SKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 Y + + + + + ++ ++ ++ N ++ + Sbjct: 973 MYQQMLKHRRLFIGDQTNKKMVGLRGFNNQIMQLKKICNHPFVFEAVEDQINPTRETNAA 1032 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ LE ++ K +++ + + ++ D+ Sbjct: 1033 IWRVAGKLELLERVLPKLKATGHRVLIFFQMTQIMDIMEDFLRYIDIKYLRLDGHTKSDE 1092 Query: 97 DPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N+ + + G GLNLQ + ++ F W+ + + Sbjct: 1093 RSELLSLFNDEEAGYFCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 1146 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI QN+++E++L++ K I ++ A K Sbjct: 1147 RAHRIGQKNEVKILRLITQNSVEEVILEKAHKKLDIDGKVIQAGK 1191 >gi|260940993|ref|XP_002615336.1| hypothetical protein CLUG_04218 [Clavispora lusitaniae ATCC 42720] gi|238850626|gb|EEQ40090.1| hypothetical protein CLUG_04218 [Clavispora lusitaniae ATCC 42720] Length = 1269 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 80/227 (35%), Gaps = 36/227 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA------SKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y + + + + N + +K ++ ++ N ++E + Sbjct: 752 LYQQMLKHNALFVGSQTTGTNNKSGIKGLNNKIMQLRKICNHPFVFEEVEDILNSSRITN 811 Query: 53 ------DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTL 94 K + L+ I+ K + +++ + S + + Sbjct: 812 ELIWRTSGKFELLDRILPKFKASGHKVLIFFQMTSVMNIFEDFLRLRDMNYLRLDGSTKA 871 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++ +N+ + + + G GLNLQ + ++ F W+ + + Sbjct: 872 EDRQDMLKSFNKPESDIFCFLLSTRAGGLGLNLQS-ADTVIIFDTDWNPHQ-----DLQA 925 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 926 QDRAHRIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKVIQAGK 972 >gi|281351942|gb|EFB27526.1| hypothetical protein PANDA_008144 [Ailuropoda melanoleuca] Length = 716 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 82/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L+ + + S +L N ++ +E Sbjct: 392 ELYKRFLRQAKPAEELREGKMSVSS-LSSITLLKKLCNHPALIYDKCVEEEDGFEGALEI 450 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 451 FPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY 510 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 511 VRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 569 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 570 -----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 618 >gi|156845664|ref|XP_001645722.1| hypothetical protein Kpol_1043p54 [Vanderwaltozyma polyspora DSM 70294] gi|156116389|gb|EDO17864.1| hypothetical protein Kpol_1043p54 [Vanderwaltozyma polyspora DSM 70294] Length = 1725 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 76/226 (33%), Gaps = 35/226 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVHDE--- 54 Y + + + + +S ++ ++ ++ N ++ + E Sbjct: 1032 LYQQMLKHKRLFVGDQGNNKKSSGLRGFNNQIMQLKKICNHPFVFESVEDQINPTRETNE 1091 Query: 55 ---KIKALEVIIE------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 ++ ++ KA +++ + + ++ D Sbjct: 1092 NIWRVAGKFELLGRVLPKLKATGHRVLIFFQMTQIMDIMEDFLRHIDVKYLRLDGHTKHD 1151 Query: 96 KDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N+ + G GLNLQ + ++ F W+ + + Sbjct: 1152 ERSELLPMFNDPNSDYFCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQ 1205 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +N+++E +L++ K I ++ A K Sbjct: 1206 DRAHRIGQKNEVRILRLITENSVEEAILEKAHKKLDIDGKVIQAGK 1251 >gi|290973846|ref|XP_002669658.1| DEAD/DEAH box helicase [Naegleria gruberi] gi|284083208|gb|EFC36914.1| DEAD/DEAH box helicase [Naegleria gruberi] Length = 1029 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 72/219 (32%), Gaps = 27/219 (12%) Query: 1 MKQYHK-FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----HDEK 55 +K Y + + F + ++ N EK + K Sbjct: 545 VKIYDEYLKSREVTGTLDGEHLLFKA---ITNLRKVCNHPDLICTEKKPDDFGAVEKSGK 601 Query: 56 IKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDPCTIQE 103 + +E ++ K +++ F + + + I + Sbjct: 602 MMVVEKLLSLWKEQNHRVLLFSQSKKMLDVFEPFLQERDYTYSRMDGDTPVKERSVLINQ 661 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + KI + G G+NL G N ++ F W+ + + R + G Sbjct: 662 FNSDDKIFVFLLTTKVGGLGVNL-IGANRIILFDPDWNPST-----DLQALERAWRLGQT 715 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V VY L+ TI+E + R K + + +L +++ Sbjct: 716 KQVTVYRLMTSGTIEEKMYHRQIFKQFLSNKVLKDPRQK 754 >gi|164655795|ref|XP_001729026.1| hypothetical protein MGL_3814 [Malassezia globosa CBS 7966] gi|159102915|gb|EDP41812.1| hypothetical protein MGL_3814 [Malassezia globosa CBS 7966] Length = 1053 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 78/227 (34%), Gaps = 39/227 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 QR+ Y L ++IEA N + ++ + N + Sbjct: 417 DMQRKWYKSLLEKDIEAVNGALSKKEGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 476 Query: 47 HWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTL 94 + K+ L+ ++ K + +++ + L Sbjct: 477 EHLVYNSGKMDILDKLLRKMKERGSRVLIFCQMSRMLDILEDYCLFREYTYCRIDGSSVH 536 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N L + G G+NL +++V F W+ + + Sbjct: 537 EDRIAAIDEYNRPDSDKFLFLLTTRAGGLGINLTS-ADVVVLFDSDWNPQA-----DLQA 590 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G K+ VFVY + ++I+E +L+R K + L++ + Sbjct: 591 MDRAHRIGQKKQVFVYRFVTDHSIEERILERAAQKLRLDQLVIQQGR 637 >gi|71005328|ref|XP_757330.1| hypothetical protein UM01183.1 [Ustilago maydis 521] gi|46096734|gb|EAK81967.1| hypothetical protein UM01183.1 [Ustilago maydis 521] Length = 1692 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 79/232 (34%), Gaps = 39/232 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSAS---------KTVKCLQLANGAVYYD-------- 43 +K Y + ++ +N A A ++ ++ N ++ Sbjct: 1041 LKLYQQMKKHKMILSGEDNSTAGKKAKPQGIRGLQNAIMQLRKICNHPYVFEQVELAINP 1100 Query: 44 --EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 E K + L+ ++ K A +++ + + + ++ Sbjct: 1101 TKENGPDLYRVAGKFELLDRLLPKLFATKHRVLIFFQMTAIMDIMEDFLRYRGFKYLRLD 1160 Query: 91 -GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D ++ +N + + G GLNLQ + ++ + W+ + Sbjct: 1161 GSTKPDDRSQLLKLFNAPGSDYFVFILSTRAGGLGLNLQS-ADTVIIYDSDWNPHQ---- 1215 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G K V + L+ + +++E +L R + K I+ ++ A K Sbjct: 1216 -DLQAQDRAHRIGQKMEVRILRLVTEKSVEETILARAQDKLEIEGKVIQAGK 1266 >gi|281337316|gb|EFB12900.1| hypothetical protein PANDA_013661 [Ailuropoda melanoleuca] Length = 912 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 327 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 386 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 387 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 446 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 447 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 501 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 502 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 553 >gi|301620878|ref|XP_002939792.1| PREDICTED: DNA excision repair protein ERCC-6-like [Xenopus (Silurana) tropicalis] Length = 732 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 74/231 (32%), Gaps = 41/231 (17%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY----------------D 43 + Y F +E+Y L GE + ++ N + + Sbjct: 322 QVYQTFIDSKEVYGILNGE----MQVFPGLIALRKICNHPDLFSGGPKILKGTRDEDLEE 377 Query: 44 EEKHWKEVHDEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQG 91 EE+ K+ +E ++ +++ F Sbjct: 378 EEQFGFWKRSGKLIVVEALLKIWHRQGHRVLLFTQSRQMLQILEVFVRSRCYSYLKMDGT 437 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T+ I ++N + + + G G+NL G N ++ + W+ + Sbjct: 438 TTIASRQPLIAKYNEDPSLFVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPST-----DT 491 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 492 QARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 542 >gi|213408929|ref|XP_002175235.1| SNF2 family helicase Rhp26 [Schizosaccharomyces japonicus yFS275] gi|212003282|gb|EEB08942.1| SNF2 family helicase Rhp26 [Schizosaccharomyces japonicus yFS275] Length = 983 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 68/223 (30%), Gaps = 34/223 (15%) Query: 3 QYHKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD----------EEKHWKE 50 Y +F ++ L G+ ++ N E K+ Sbjct: 571 AYQQFLNSGDMNKILNGK----RQVLFGVDVLRKICNHPDLVMREFLEHKEGYEYGDPKK 626 Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPC 99 K+ + + K+ ++ L ++ Sbjct: 627 SGKLKVVQALLKLWKSQNHRTLLFSQTRQMLDILEKAIGSMGDISYCRMDGTTSIGLRQG 686 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N+ + + G G+NL G + ++ F W+ + R + Sbjct: 687 LVDEFNKTSRYDVFLLTTRVGGLGINLT-GADRVIIFDPDWNPST-----DAQARERAWR 740 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L++ TI+E + R K + + +L + Sbjct: 741 LGQKRDVVVYRLMSSGTIEEKIYHRQIFKQFLTNKILKDPNQR 783 >gi|254574520|ref|XP_002494369.1| Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation [Pichia pastoris GS115] gi|238034168|emb|CAY72190.1| Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation [Pichia pastoris GS115] gi|328353801|emb|CCA40198.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [Pichia pastoris CBS 7435] Length = 1649 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 78/226 (34%), Gaps = 33/226 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSA---SKTVKCLQLANGAVYYDEEKHWKEVH----- 52 +K Y + + + E+ + +K ++ ++ N ++E ++ Sbjct: 998 IKLYEQMLKYNQLFVGDESKKPIGVKGLNNKLMQLRKICNHPFVFEEVENLINPTRETNN 1057 Query: 53 -----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD---------- 95 K + L+ I+ K +++ + + ++ Sbjct: 1058 NIWRVSGKFELLDRILPKFKATGHRVLIFFQMTQIMDIMEDFLRLRDMKYLRLDGATKSD 1117 Query: 96 KDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 1118 DRQDMLRLFNAEGSDYFAFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQ-----DLQAQ 1171 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++I+E++L + K I ++ A + Sbjct: 1172 DRAHRIGQKNEVRILRLITEDSIEEVILSKAYEKLDIDGKVIQAGR 1217 >gi|310822580|ref|YP_003954938.1| snf2/helicase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309395652|gb|ADO73111.1| SNF2/helicase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1282 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 21/173 (12%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 + YD + K++ L ++E K+ ++V F S L +++ +G Sbjct: 1081 SHPRLYD---AQSGISSSKMRRLLELLEELKSEGHRVLVFSQFTSHLELVREEVERGGFT 1137 Query: 95 DK----------DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + IQ + EGK + + G G+NL + ++ WW+ Sbjct: 1138 YQYLDGSTPLGARAKRIQAFQEGKGDVFLISLKAGGTGINLTA-ADYVIHLDPWWNPA-- 1194 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E R + G R V VY LIA+ TI+E +L K + +L Sbjct: 1195 ---VEDQATDRAHRIGQTRPVTVYRLIARGTIEEQILSLHSDKRALVAGVLEG 1244 >gi|170572145|ref|XP_001891999.1| Potential global transcription activator SNF2L [Brugia malayi] gi|158603134|gb|EDP39180.1| Potential global transcription activator SNF2L, putative [Brugia malayi] Length = 1024 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFN---------SASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ N + + + N + Sbjct: 396 VKIYVGLSKMQREWYTRILMKDIDVVNGAGKLEKARIMNILMHLRKCCNHPYLFDGAEPG 455 Query: 43 --DEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ L+ ++ K + +++ + L L+ Sbjct: 456 PPYTTDQHLVDNSGKMVLLDKLLVKLKAQGSRVLIFSSMSRMLDLLEDYCWWRGYRYCRL 515 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I E+N+ + + G G+NL ++++ + W+ + Sbjct: 516 DGQTVHDERQKSIDEFNKPDSDKFIFMLTTRAGGLGINLTA-ADVVIIYDSDWNPQ---- 570 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ I NT+DE +++R K + +++ + Sbjct: 571 -VDLQAMDRAHRIGQKKQVRVFRFITDNTVDERIIERAEMKLHLDSIVIQQGR 622 >gi|67538946|ref|XP_663247.1| hypothetical protein AN5643.2 [Aspergillus nidulans FGSC A4] gi|40743546|gb|EAA62736.1| hypothetical protein AN5643.2 [Aspergillus nidulans FGSC A4] gi|259484887|tpe|CBF81492.1| TPA: SNF2 family helicase/ATPase, putative (AFU_orthologue; AFUA_4G13460) [Aspergillus nidulans FGSC A4] Length = 1111 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 77/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKH--------WK 49 +K Y K + G+ + ++ + N ++ + Sbjct: 433 VKWYQKILEKDIDAVNGAGGKKESKTRLLNIVMQLRKCCNHPYLFEGAEEGPPYTNDVHI 492 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKD 97 + K+ L+ ++ +A + +++ + + + Sbjct: 493 INNSGKMVILDKLLARMQAQGSRVLIFSQMSRVLDILEDYCALRKYQYCRIDGTTAHEDR 552 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + + + R Sbjct: 553 IAAIDEYNKPDSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDR 606 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V VY I ++ I+E VL+R K + L++ + + Sbjct: 607 AHRIGQTKQVVVYRFITESAIEERVLERAAQKLRLDQLVIQQGRAQ 652 >gi|170050421|ref|XP_001861304.1| helicase [Culex quinquefasciatus] gi|167872038|gb|EDS35421.1| helicase [Culex quinquefasciatus] Length = 1024 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 84/225 (37%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYYDEEKH--------W 48 K QRE Y + ++I+ N A K ++ + N +D + Sbjct: 370 KMQREWYTKILMKDIDIVNGAGKMEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDWH 429 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDK 96 + K+ LE ++ + + +++ L L+ + Sbjct: 430 LVENSGKMIILEKLLNKLQEQGSRVLIFSQMTRMLDILEDYCHWRGYNYCRLDGQTPHED 489 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+N + + G G+NL ++++ + W+ + ++ + Sbjct: 490 RTKMIDEYNAEGSQKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 543 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI +NTI+E +++R K + L++ + Sbjct: 544 RAHRIGQKKQVRVFRLITENTIEEKIVERAEIKLKLDKLVIQQGR 588 >gi|291401180|ref|XP_002716976.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like [Oryctolagus cuniculus] Length = 1051 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NSA K ++ + N + Sbjct: 409 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 468 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 469 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 528 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 529 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 583 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 584 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 635 >gi|114596229|ref|XP_001144412.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 3 [Pan troglodytes] Length = 936 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NSA K ++ + N + Sbjct: 294 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 353 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 354 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 413 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 414 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 468 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 469 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 520 >gi|71014727|ref|XP_758754.1| hypothetical protein UM02607.1 [Ustilago maydis 521] gi|46098544|gb|EAK83777.1| hypothetical protein UM02607.1 [Ustilago maydis 521] Length = 1108 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 80/223 (35%), Gaps = 39/223 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYYDEEK-------- 46 + QR+ Y + ++I+A N + ++ + N +D + Sbjct: 461 EMQRKWYKSILEKDIDAVNGGVGKKEGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPFTTD 520 Query: 47 HWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTL 94 + K+ L+ ++ K + +++ + L G Sbjct: 521 EHLVDNSGKMVILDRLLHKMKQKGSRVLIFSQMSRMLDILEDYCLFREYKYCRIDGGTAH 580 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D I E+N+ + + G G+NL +I+V F W+ + + Sbjct: 581 DDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQA-----DLQA 634 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G + V+V+ + ++ I+E +L R K + L++ Sbjct: 635 MDRAHRIGQTKQVYVFRFVTEHAIEERILDRAAQKLRLDQLVI 677 >gi|14028669|gb|AAK52454.1|AF325921_1 DNA-dependent ATPase SNF2H [Mus musculus] Length = 1051 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 409 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 468 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K ++ +++ L L+ Sbjct: 469 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQSSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 528 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 529 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 583 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 584 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 635 >gi|296195484|ref|XP_002745366.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform 1 [Callithrix jacchus] Length = 1052 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NSA K ++ + N + Sbjct: 410 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 469 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 470 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 529 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 530 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 585 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636 >gi|157817975|ref|NP_001100889.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Rattus norvegicus] gi|149037939|gb|EDL92299.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (predicted), isoform CRA_a [Rattus norvegicus] Length = 995 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NSA K ++ + N + Sbjct: 353 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 412 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 413 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 472 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 473 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 527 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 528 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 579 >gi|146299520|ref|YP_001194111.1| non-specific serine/threonine protein kinase [Flavobacterium johnsoniae UW101] gi|146153938|gb|ABQ04792.1| Non-specific serine/threonine protein kinase [Flavobacterium johnsoniae UW101] Length = 966 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 78/210 (37%), Gaps = 21/210 (10%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + + R G + + + +K QL+N D+E + Sbjct: 747 KLYEQEKSKARNFLLKTDGSGPDKISIINTLMKLRQLSNHPKMVDQESEIDSGKYIAVTN 806 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGK 108 + KA +I+ F ++L + + K ++ + E + Sbjct: 807 YLENLVKA-KQKVIIFSSFVTNLNFYTDWCKENKITYCEITGETPAAKREQQVKLFQEKE 865 Query: 109 IPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 PL F + G GLN+ + ++F WW+ E+ GV R + G V V Sbjct: 866 EPLLFFISLKAGGVGLNITK-ASYVLFLDPWWNP-----FAEKQGVGRAHRIGQLNKVNV 919 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I++NT++E +++ K + D LL Sbjct: 920 VRFISKNTVEEKIIKLQENKKLLSDSLLEE 949 >gi|37590263|gb|AAH59235.1| Ino80 protein [Mus musculus] Length = 1088 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 70/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 615 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 674 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ I + + G G+NL + ++F+ W+ Sbjct: 675 TYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 733 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 734 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 783 >gi|320170047|gb|EFW46946.1| helicase [Capsaspora owczarzaki ATCC 30864] Length = 1078 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 76/220 (34%), Gaps = 28/220 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKH--------WKEVHD 53 + Y + + N ++ ++ + N +D + Sbjct: 420 EVYQGILLKDLDVVNSGNANKVRLSNILMQLRKCCNHPYLFDGTEPGPPYTTDKHLLDAC 479 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTI 101 K+ L+ ++ +A + +++ L L+ + I Sbjct: 480 GKMSVLDKLLPKLQAQGSRVLIFSQMTRMLDILEDYCMWRGHTYCRLDGQTDHEDRARMI 539 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 E+N L + G G+NL Y + ++ + W+ + ++ R + Sbjct: 540 DEYNAPNSSKFLFLLSTRAGGLGINL-YTADTVILYDSDWNPQ-----MDLQAQDRAHRI 593 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V ++ + +NT++E +++R K + +++ + Sbjct: 594 GQKKQVRIFRFVTENTVEERIIERAEMKLRLDAMVIQQGR 633 >gi|307209151|gb|EFN86289.1| DNA excision repair protein ERCC-6 [Harpegnathos saltator] Length = 1005 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 63/208 (30%), Gaps = 36/208 (17%) Query: 26 ASKTVKCLQLANGAVYY-------------------DEEKHWKEVHDEKIKALEVIIEKA 66 ++ N + ++ +WK + + I + Sbjct: 556 LIALSALRKICNHPDLFLYTRQLDSEEDIDLSEELLEKFGYWKRAGKMTVVRSLLKIWQK 615 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE-GKIPLLFAH 115 +++ + L+ + + IQ +N + Sbjct: 616 QGHRVLLFTQGIQMIHILESLLQHEGYTYLRLDGSTAMSQRQHVIQMFNNNPSYFVFLLT 675 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G GLNL G N ++ + W+ + R + G + V +Y LI T Sbjct: 676 TRVGGLGLNLT-GANRVIIYDPDWNPAT-----DAQARARAWRIGQNKQVTIYRLITAGT 729 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 I+E + R K + + +L+ ++ + Sbjct: 730 IEEKMYHRQIFKLLLSNKVLDEPRQRRL 757 >gi|326334483|ref|ZP_08200694.1| Snf2 family helicase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693252|gb|EGD35180.1| Snf2 family helicase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 950 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 73/221 (33%), Gaps = 28/221 (12%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + + R + + N + Q++N D + K + Sbjct: 733 KWYEREKSKVRNKLLHIDNHSQT-LNILNMLTLLRQISNHPKLLD---KQSSIPSGKYEE 788 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWN 105 + ++E+ + ++ F S L + ++ Sbjct: 789 VINLLEQLLLSQHKALIFSSFISHLEIYEDWCKTNNIKFTTLTGDTPIPERKIQVESFQK 848 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + I F + GLNL + ++ WW+ ER + R + G + V Sbjct: 849 DKDIMFFFISLKAGEVGLNLTT-ASYVLLLDPWWNP-----FAERQAIARAHRLGQQHKV 902 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 V + Q+T++E ++ + K + + ++ L KE + Sbjct: 903 TVIRFVTQDTLEEKIIHLQQNKKELSENIIEENVLVKEVLE 943 >gi|11035016|gb|AAG01537.2|AF292095_1 imitation switch ISWI [Xenopus laevis] Length = 1046 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEEKH- 47 +K Y K QRE Y + ++I+ NS + ++ + N +D + Sbjct: 403 IKIYVGLSKMQREWYTKILMKDIDILNSSGKTDKMRLLNILMQLRKCCNHPYLFDGAEPG 462 Query: 48 -------WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + I++ L L+ Sbjct: 463 PPYTTDLHLATNSGKMMVLDKLLPKLKEQDSRILIFSQMTRVLDILEDYCMWRNYEYCRL 522 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +I +N + + G G+NL ++++ + W+ + Sbjct: 523 DGQTPHEERQESIIAYNAPGSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 577 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 578 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 629 >gi|326918376|ref|XP_003205465.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [Meleagris gallopavo] Length = 1020 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKT---------VKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NSA K ++ + N + Sbjct: 377 VKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPG 436 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 437 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 496 Query: 93 ----TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 497 DGQTPHDERQASINAYNEPGSSKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 551 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 552 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 603 >gi|148678936|gb|EDL10883.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Mus musculus] Length = 993 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NSA K ++ + N + Sbjct: 351 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 410 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 411 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 470 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 471 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 525 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 526 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 577 >gi|207340928|gb|EDZ69127.1| YOR290Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 824 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA----SKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 Y + + + +N + ++ ++ ++ N ++E + Sbjct: 143 MYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDD 202 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K +++ + + ++ D+ Sbjct: 203 IWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDE 262 Query: 97 DPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 263 RSELLRLFNAPDSEYLCFILSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 316 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E++L+R K I ++ A K Sbjct: 317 RAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGK 361 >gi|126342338|ref|XP_001373609.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Monodelphis domestica] Length = 1010 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 365 VKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 424 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ AL+ ++ K + +++ L L+ Sbjct: 425 PPYTTDTHLVNNSGKMVALDKLLSKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 484 Query: 92 ---RTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ I +N + + G G+NL ++++ + W+ + Sbjct: 485 DGQTPHEEREEAIDTFNAPNSTKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 539 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI NT+++ +++R K + +++ + Sbjct: 540 -VDLQAMDRAHRIGQKKPVRVFRLITDNTVEDRIVERAEIKLRLDSIVIQQGR 591 >gi|115633814|ref|XP_780898.2| PREDICTED: similar to excision repair protein, partial [Strongylocentrotus purpuratus] Length = 973 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 80/232 (34%), Gaps = 42/232 (18%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY----------------- 42 + Y ++ +E L+GE + + + ++ N Sbjct: 283 QVYEEYLASKECNLILRGE----YKVFAGLITLRKICNHPDLVSGGPRIFSHQNLSDEDL 338 Query: 43 -DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--- 96 +E+++ K+ +E ++ K +++ L ++ + + Sbjct: 339 TEEQRYGYYKRAGKMIVVESLLKLWKEQNHRVLLFSQSKQMLDIMEDFVKDRYSYMRMDG 398 Query: 97 ------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I ++N + +I L G G+NL G N ++ + W+ + Sbjct: 399 TTTISSRQPLITKFNSDPRIFLFLLTTRVGGLGVNLT-GANRVIIYDPDWNPST-----D 452 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V +Y L+ +I+E + R K+ + + +L ++ Sbjct: 453 TQARERSWRIGQTKQVTIYRLLTAGSIEEKIYHRQIFKTFLTNRVLKDPRQR 504 >gi|296082077|emb|CBI21082.3| unnamed protein product [Vitis vinifera] Length = 1356 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 30/227 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---------- 51 + Y Y L + + ++ +L + + E Sbjct: 546 EYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDATEAYKLLLE 605 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ L+ ++ K +++ F L L+ + + Sbjct: 606 SSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDGKVGGAERQV 665 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + + R Sbjct: 666 RIDRFNAKNSSRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAH 719 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G V +Y LI + TI+E ++Q + K ++ L++ LK + I+ Sbjct: 720 RLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766 >gi|50310529|ref|XP_455284.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644420|emb|CAG97992.1| KLLA0F04521p [Kluyveromyces lactis] Length = 1344 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 77/227 (33%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVH---- 52 + Y + + + A + +K ++ ++ N +DE ++ Sbjct: 767 QLYEQMLKHNAFFIGAGTEGATKAGIKGLNNKVMQLRKICNHPFVFDEVENVINPTRENS 826 Query: 53 ------DEKIKALEVIIEKA--NAAPIIVAYH----------FNSDLARLQKAFPQGRTL 94 K + L+ ++ K + +++ + F G Sbjct: 827 SILYRVSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMRDLKYMRLDGGTKA 886 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 887 EDRTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 940 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 941 QDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 987 >gi|19115773|ref|NP_594861.1| ATP-dependent DNA helicase Snf21 [Schizosaccharomyces pombe 972h-] gi|46397295|sp|Q9UTN6|SNF21_SCHPO RecName: Full=Chromatin structure-remodeling complex subunit snf21; AltName: Full=ATP-dependent helicase snf21; AltName: Full=RSC complex subunit snf21 gi|5830480|emb|CAB54824.1| ATP-dependent DNA helicase Snf21 [Schizosaccharomyces pombe] gi|42558224|dbj|BAD11105.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Schizosaccharomyces pombe] Length = 1199 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 78/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEVH------ 52 K Y++ ++ ++ ++ ++ N +++ + + Sbjct: 671 KLYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLKKICNHPFVFEDVERSIDPTGFNYDM 730 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K + I++ + + ++ D Sbjct: 731 LWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADD 790 Query: 97 DPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N+ + + G GLNLQ + ++ F W+ + + Sbjct: 791 RSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQ-----DLQAQD 844 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V +Y LI + +++E +L R + K I ++ A K Sbjct: 845 RAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQAGK 889 >gi|321465306|gb|EFX76308.1| RAD54, DNA repair and recombination protein [Daphnia pulex] Length = 748 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 75/228 (32%), Gaps = 42/228 (18%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------------------- 44 + ++ + + + + + +L + E Sbjct: 431 EAVKSKMREANEKPSKSSMTALAAITNLKKLCSHPELVYEKCQSGVDGFEGTLSLFPATF 490 Query: 45 -EKHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ---------- 90 + + K+ L+ I+ I++ ++ L +K Sbjct: 491 DPRKLQTELSGKLCVLDCILAMVKSTTNDKIVLISNYTQTLDLFEKLCRMRSYPCVRLDG 550 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ K ++ +N+ + + G GLNL G N LV F W+ Sbjct: 551 SMSIKKRAKIVEHFNDPASSDFVFLLSSKAGGCGLNL-IGANRLVMFDPDWNPAN----- 604 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ F+Y L++ TI+E + QR K + +++ Sbjct: 605 DDQAMARVWRDGQKKPCFIYRLLSTGTIEEKIFQRQAHKKALSSCVVD 652 >gi|171686770|ref|XP_001908326.1| hypothetical protein [Podospora anserina S mat+] gi|170943346|emb|CAP68999.1| unnamed protein product [Podospora anserina S mat+] Length = 1395 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 82/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 + Y + Q+ L D +G A ++ ++ +L N +DE ++ Sbjct: 818 RLYKQMVTHQKILVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPMSVSNDL 877 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K +++ + + + ++ Sbjct: 878 LWRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDFLRFRGIQYLRLDGTTKSED 937 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++++N P + G GLNLQ + ++ + W+ + + Sbjct: 938 RSDLLRDFNRPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 991 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ +++E +L+R R K + ++ A + Sbjct: 992 RAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGKVIQAGR 1036 >gi|83286649|ref|XP_730253.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23489925|gb|EAA21818.1| SNF2 family N-terminal domain, putative [Plasmodium yoelii yoelii] Length = 1350 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 75/216 (34%), Gaps = 27/216 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DE 54 K Y + + + ++ + N +D + + Sbjct: 489 KLYSDILSKNIDVINAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLIETSG 548 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ K + +++ L + D+ I Sbjct: 549 KMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKKYEYLRIDGSTVGDERQIRIN 608 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++NE + + G G+NL +I++ F ++ + ++ + R + G Sbjct: 609 KFNEPNSKYFIFLLSTRAGGIGINLTT-ADIVILFDSDYNPQ-----MDIQAMDRAHRIG 662 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K+ V VY + QN+++E +++R K + L++ Sbjct: 663 QKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQ 698 >gi|149023010|gb|EDL79904.1| rCG26684 [Rattus norvegicus] Length = 1032 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 70/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL++++ K+ +++ + L++ Sbjct: 559 NGWSFIRIPGKESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 618 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ I + + G G+NL + ++F+ W+ Sbjct: 619 TYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 677 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 678 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 727 >gi|68483751|ref|XP_714234.1| hypothetical protein CaO19.607 [Candida albicans SC5314] gi|46435782|gb|EAK95157.1| hypothetical protein CaO19.607 [Candida albicans SC5314] gi|238880196|gb|EEQ43834.1| hypothetical protein CAWG_02085 [Candida albicans WO-1] Length = 1055 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HDEK 55 + Y F + DL+ N ++ N + K K Sbjct: 557 ELYESFLQS--EDLESILKGKRNVLMGVDILRKICNHPDLVYRDTLMKRKNYGDPAKSGK 614 Query: 56 IKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------------FPQGRTLDKD 97 ++ L+ ++ ++ ++ L L+K + K Sbjct: 615 MQVLKNLLRLWQSENHKTLLFCQTRQMLDILEKFVANLSLINGGDFNYLRMDGSTPISKR 674 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + + + G G+NL G + ++ + W+ + R Sbjct: 675 QMLVDAFNQDPDMHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DIQARERA 728 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR + +Y L+ +I+E + R K+ + + +L K+ Sbjct: 729 WRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQR 773 >gi|255718303|ref|XP_002555432.1| KLTH0G09196p [Lachancea thermotolerans] gi|238936816|emb|CAR24995.1| KLTH0G09196p [Lachancea thermotolerans] Length = 1308 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 73/227 (32%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVHDE-- 54 + Y + + A +K ++ ++ N +DE + Sbjct: 715 QLYQQMLKHNALFFGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEVEGIINPTRGNS 774 Query: 55 --------KIKALEVIIEKAN--AAPIIVAYH----------FNSDLARLQKAFPQGRTL 94 K + L+ I+ K +++ + F Sbjct: 775 PLLYRVAGKFELLDRILPKFKATGHRVLMFFQMTQVMDIMEDFLRMRDLKYLRLDGATKT 834 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 835 EERTGMLKLFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 888 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 889 QDRAHRIGQKNEVRILRLITTDSVEEVILERALQKLDIDGKVIQAGK 935 >gi|296195486|ref|XP_002745367.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform 2 [Callithrix jacchus] gi|296195488|ref|XP_002745368.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform 3 [Callithrix jacchus] Length = 995 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 353 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 412 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 413 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 472 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 473 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 527 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 528 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 579 >gi|260942759|ref|XP_002615678.1| hypothetical protein CLUG_04560 [Clavispora lusitaniae ATCC 42720] gi|238850968|gb|EEQ40432.1| hypothetical protein CLUG_04560 [Clavispora lusitaniae ATCC 42720] Length = 1563 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 75/226 (33%), Gaps = 34/226 (15%) Query: 2 KQYHKFQRELYCDLQGENI----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE--- 54 K Y + G N+ ++ ++ ++ N Y+E ++ E Sbjct: 960 KLYRMMLKYNALFTGGGTGQKPNTIKNANNQLMQLRKICNHPFVYEEVENLINPQAETND 1019 Query: 55 ---KIKALEVII------EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLD 95 ++ ++ K +++ + + G D Sbjct: 1020 TIWRVAGKFELLDRVLPKFKKTGHRVLLFFQMTQIMDIMEDFLRLRGMKYMRLDGGTKAD 1079 Query: 96 KDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +NE + G GLNLQ + ++ F W+ + + Sbjct: 1080 DRTYLLNLFNEPNSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQ-----DLQAQ 1133 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++I+E+VL+R K I ++ A K Sbjct: 1134 DRAHRIGQKNEVRILRLITEDSIEEMVLERAVAKLEIDGKVIQAGK 1179 >gi|323144713|ref|ZP_08079295.1| SNF2 family N-terminal domain protein [Succinatimonas hippei YIT 12066] gi|322415530|gb|EFY06282.1| SNF2 family N-terminal domain protein [Succinatimonas hippei YIT 12066] Length = 1337 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 73/214 (34%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDE-EKHWKEVHDEKIKALE 60 Y E L + N + Q+ + YDE H K K A+ Sbjct: 1110 LYQAKLDESLNKLSSDVKSKMINVITTINALKQICDSPAVYDEGNSHNKPEDSGKSVAVL 1169 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQ-EWNE 106 ++E I+ + L++ TL + I N+ Sbjct: 1170 DLLENILDQGKKTIIFTQYLKMGYLLKQYIKDKFAIDADFLTGETTLKERQNMIDSFQND 1229 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G G+NL ++++ F LWW+ +E R + G + V Sbjct: 1230 PDKSILILSLKAGGSGINLTA-ASVVIHFDLWWNPA-----VENQATDRAYRIGQNKTVQ 1283 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 VY ++ T++E + L K + +L + ++ Sbjct: 1284 VYRMLCSGTLEENIDATLSMKKELNELTVKENER 1317 >gi|260494465|ref|ZP_05814595.1| LOW QUALITY PROTEIN: SWF/SNF family helicase [Fusobacterium sp. 3_1_33] gi|260197627|gb|EEW95144.1| LOW QUALITY PROTEIN: SWF/SNF family helicase [Fusobacterium sp. 3_1_33] Length = 683 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 69/203 (33%), Gaps = 21/203 (10%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--AN 67 E N + K Q+ E+ KI A +I+K N Sbjct: 473 ETLAQSIDVNTNKIEVLAMLTKLRQICIDPRLLYED---ISSSSSKINACIELIKKSIEN 529 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIPLLFAHPA 117 I++ F + L + + K ++++ +PL Sbjct: 530 KQRILLFSSFTTVLDLVAQECDNLSIPYFILTGETNKIKRNQLVEDFQNEAVPLFLISLK 589 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL ++++ WW++ R + G + V V+ LI +NTI+ Sbjct: 590 AGGTGLNLTK-ASVVIHLDPWWNISAQ-----NQATDRAHRIGQEDTVQVFNLITKNTIE 643 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 E +L K + D+ + K Sbjct: 644 EKILNLQNKKKELSDIFVENSKG 666 >gi|296328143|ref|ZP_06870674.1| Snf2 family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154655|gb|EFG95441.1| Snf2 family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 225 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 66/192 (34%), Gaps = 21/192 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN 78 + K Q+ E+ KI A +IEK N I++ F Sbjct: 26 NKIEVLAMLTKLRQICIDPRSLYED---VSSSSSKINAYIELIEKSIENNQKILLFSSFT 82 Query: 79 SDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 + L K ++ + +PL + G GLNL Sbjct: 83 TVLDLVAQECDNLSIPYFMLTGETNKVKRKEMVENFQNEAVPLFLISLKAGGTGLNLTK- 141 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 ++++ WW++ ++ R + G + V ++ LI +NTI+E +L K Sbjct: 142 ASVVIHLDPWWNIS-----VQNQATDRAHRIGQEDTVQLFNLITKNTIEEKILNLQSKKK 196 Query: 189 TIQDLLLNALKK 200 + D+ + K Sbjct: 197 ELSDIFVENSKG 208 >gi|255548778|ref|XP_002515445.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] gi|223545389|gb|EEF46894.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] Length = 1470 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 75/227 (33%), Gaps = 30/227 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 + Y Y L + + ++ +L + + + Sbjct: 543 EYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIQDSNESFRQLVE 602 Query: 53 -DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K++ L+ ++ K +++ F L L+ + + Sbjct: 603 SSGKLQLLDKMMVRLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDGKVGGAERQV 662 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + + R Sbjct: 663 RIDRFNAKNSSRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAH 716 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G V +Y LI + TI+E ++Q + K ++ L++ LK + I+ Sbjct: 717 RLGQTNKVMIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNIN 763 >gi|224143281|ref|XP_002324903.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222866337|gb|EEF03468.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1334 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 74/227 (32%), Gaps = 30/227 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------- 54 + Y Y L + + ++ +L + + E +E Sbjct: 547 EYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLVE 606 Query: 55 -----KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPC 99 ++ ++ K +++ F L L+ + + Sbjct: 607 TSGKLQLLHKMMVRLKEQGHRVLIYSQFQHMLDLLEDYCTHKKWTYERIDGKVGGAERQI 666 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + + R Sbjct: 667 RIDRFNAKNSSRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAH 720 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G V +Y LI + TI+E ++Q + K ++ L++ LK + I+ Sbjct: 721 RLGQTNKVMIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNIN 767 >gi|326426853|gb|EGD72423.1| transcription activator [Salpingoeca sp. ATCC 50818] Length = 1106 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 32/233 (13%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEEK-- 46 +K Y K QR+ Y ++ ++I+ N + ++ + N +D + Sbjct: 464 IKVYVGMSKMQRDWYKNILMKDIDTINGAGRVEKMRLLNILMQLRKCCNHPYLFDGAEPG 523 Query: 47 ------HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 + K+ L+ ++ K A + +++ L L+ Sbjct: 524 PPFTTDQHLVDNSGKLVVLDKLLTKLKAQGSRVLIFSQMTRMLDILEDYSWWRGHKYCRL 583 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I ++N + + G G+NL Y ++++ + ++ + Sbjct: 584 DGSTAHEIRGEMIDDFNRPNSDKFMFLLSTRAGGLGINL-YTADVVIIYDSDFNPQ---- 638 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ R + G + V V+ I + T++E +++R K + +++ + Sbjct: 639 -MDLQAQDRAHRIGQTKEVRVFRFITEKTVEERIVERAEMKLRLDAVVIQQGR 690 >gi|221046276|dbj|BAH14815.1| unnamed protein product [Homo sapiens] Length = 995 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 353 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 412 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 413 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 472 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 473 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 527 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 528 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 579 >gi|297293444|ref|XP_001093597.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like isoform 2 [Macaca mulatta] Length = 995 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 353 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 412 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 413 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 472 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 473 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 527 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 528 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 579 >gi|297482338|ref|XP_002692716.1| PREDICTED: kismet-like [Bos taurus] gi|296480623|gb|DAA22738.1| kismet-like [Bos taurus] Length = 2935 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1161 KYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1220 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1221 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1280 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1281 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1337 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1338 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1390 >gi|194672930|ref|XP_612494.4| PREDICTED: kismet-like [Bos taurus] Length = 2940 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1166 KYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1225 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1226 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1285 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1286 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1342 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1343 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1395 >gi|194380928|dbj|BAG64032.1| unnamed protein product [Homo sapiens] Length = 995 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 353 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 412 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 413 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 472 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 473 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 527 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 528 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 579 >gi|66801511|ref|XP_629681.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60463108|gb|EAL61303.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 2129 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 66/163 (40%), Gaps = 19/163 (11%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDP 98 K++ L+ +++ K +++ F + L+ + D+ Sbjct: 1765 DSGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKYLRLDGSSKLDDRRD 1824 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ I +CG G+NL + ++F+ W+ ++ R + Sbjct: 1825 MVDDFQSDPSIFAFLLSTRACGIGINLTS-ADTVIFYDSDWNPT-----VDEQAQDRAHR 1878 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V VY LI +NTI+E +L+R + K IQ +++ K E Sbjct: 1879 LGQTRPVTVYRLITKNTIEEKILKRAKQKHQIQSIVIAGGKFE 1921 >gi|323455077|gb|EGB10946.1| hypothetical protein AURANDRAFT_62321 [Aureococcus anophagefferens] Length = 1218 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 64/196 (32%), Gaps = 28/196 (14%) Query: 25 SASKTVKCLQLANGAVYYDEE--------KHWKEVHDEKIKALEVIIE--KANAAPIIVA 74 + ++ + N + K+ L+ ++ K +++ Sbjct: 404 VLNLVMQLRKCCNHPYLFPNVEDRSLPVLGEHLVGACGKLVLLDKLLTRLKDKGHRVLIF 463 Query: 75 YHFNSDLAR---------LQKAFPQGRTLDK-DPCTIQEWNEGKI--PLLFAHPASCGHG 122 L G+T + I +N + G G Sbjct: 464 SQMTRMLDILEDFMVMRAYDYCRIDGKTAHELREEYIDAYNAPNSEKFAFLLSTRAGGLG 523 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NLQ + + W+ + + + R + G + V VY L+ +++++E V++ Sbjct: 524 INLQTADTCV-LYDSDWNPQA-----DLQAMDRCHRIGQTKPVHVYRLVTEHSVEEKVVE 577 Query: 183 RLRTKSTIQDLLLNAL 198 R + K + ++ + L Sbjct: 578 RAQQKLKLDAVVTDEL 593 >gi|323490931|ref|ZP_08096126.1| ATP-dependent helicase [Planococcus donghaensis MPA1U2] gi|323395411|gb|EGA88262.1| ATP-dependent helicase [Planococcus donghaensis MPA1U2] Length = 907 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 25/214 (11%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHW----KEVHDEKI 56 Y ++ ++ + K QL N Y +E + +K+ Sbjct: 680 LYEGLVQDTVQKMETLTGFEKKGLVLKMLSKLKQLCNHPSLYLKEPYTNAAEILPRSQKL 739 Query: 57 KAL-------------EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE 103 + + +I + I+ N + + + Sbjct: 740 ERIVTLAGEIAERGEQCLIFTQYIGMGHILQQAINELYGHEVPFLTGSMPKQQRDSLVAQ 799 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + GK P+ + G GLNL ++ WW+ +E R + G + Sbjct: 800 FQAGKFPIFILSLKAGGTGLNLTA-ATHVLHADRWWNPA-----VENQATDRAYRIGQTQ 853 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ + TI+E + L K ++ + + + Sbjct: 854 FVHVHKFVTIGTIEEKIDSLLVQKQSMSEEFIQS 887 >gi|302837688|ref|XP_002950403.1| hypothetical protein VOLCADRAFT_74566 [Volvox carteri f. nagariensis] gi|300264408|gb|EFJ48604.1| hypothetical protein VOLCADRAFT_74566 [Volvox carteri f. nagariensis] Length = 684 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 70/218 (32%), Gaps = 46/218 (21%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKE-----------------------VHDEKIKA 58 + + + +L + + H K+ A Sbjct: 379 SPHVFASLQYLRKLCSHPAMVMDLGLAAHRAAATAVLRTNEPAGVEAALRRLKHSPKLAA 438 Query: 59 LEVIIEKA-----NAAPIIVAYHFNS--DLARLQKAFPQGRTLDK---------DPCTIQ 102 L ++ + ++V S D+ P G + + +Q Sbjct: 439 LRDLLATCGGGNSSGHRMLVFAQHKSLLDIVERDLMAPYGVSYLRLDGSVEAGARFGIVQ 498 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + I +L G GLNL + +VF W+ + + R + G Sbjct: 499 RFNSDPTIDVLLLTTGVGGVGLNLTS-ADTVVFLEHDWNPMKDM-----QAMDRAHRLGQ 552 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +R V VY ++ + T++E V+ + K + ++NA Sbjct: 553 RRTVNVYRILTRGTLEERVMGLQQFKIDVAAAVVNADN 590 >gi|154299240|ref|XP_001550040.1| hypothetical protein BC1G_11798 [Botryotinia fuckeliana B05.10] gi|150857501|gb|EDN32693.1| hypothetical protein BC1G_11798 [Botryotinia fuckeliana B05.10] Length = 1433 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 78/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------- 51 + Y + D +G A ++ ++ +L N + E + Sbjct: 796 RLYKQMVTHNKLVVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFREVEDQMNPTGYINDS 855 Query: 52 ---HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K +++ + + + + + D Sbjct: 856 LWRSAGKFELLDRILPKYQATGHRVLMFFQMTAIMDIMGEFLDYRGIKFMRLDGTTKSDD 915 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 916 RSLLLKEFNAPNSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 969 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A + Sbjct: 970 RAHRIGQKNEVRILRLISSNSVEEKILERAKFKLDMDGKVIQAGR 1014 >gi|261368900|ref|ZP_05981783.1| SNF2 family protein [Subdoligranulum variabile DSM 15176] gi|282568998|gb|EFB74533.1| SNF2 family protein [Subdoligranulum variabile DSM 15176] Length = 811 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 20/191 (10%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFN 78 A + + D+ + + V D I+ + I++ ++ Sbjct: 612 APVVLKGLTLLRECCCHPLLLDDTINVEGVVDSCKLDALKILVADLFESGHKILIFSNYT 671 Query: 79 SDLARLQKA-----------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 S L +++ F + ++++ + + + G GLNL Sbjct: 672 SMLHLIRQELEKRSEYKANLFYLDGKTQQRNLLVEQFEKASAGIFLISIKAGGVGLNLTS 731 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++ + WW+ QQ I+R + G ++AV VY L+A NTI+E +L + K Sbjct: 732 -AQDVIIYDPWWNPFVEQQAIDR-----AYRIGQQQAVNVYKLVAANTIEEKILDMQKDK 785 Query: 188 STIQDLLLNAL 198 + L+N + Sbjct: 786 EQDFEELINGI 796 >gi|187934940|ref|YP_001886534.1| imitation switch iswi [Clostridium botulinum B str. Eklund 17B] gi|187723093|gb|ACD24314.1| imitation switch iswi [Clostridium botulinum B str. Eklund 17B] Length = 1050 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 74/218 (33%), Gaps = 25/218 (11%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + +++ L+ + + QL E+ KI Sbjct: 827 KIYKMYVKDIQDKLKQIDSRNNRIAIFAYLTRLRQLCLDPSIIVEDYD---GGSGKINVA 883 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 + +I+K N I++ F S L + E+N Sbjct: 884 KELIKKSIKNNHKILLFSQFTSVLHKVCDELKGEQISYLYLDGSTPSKERIRLTHEFNNN 943 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I + + G GLNL ++++ F WW+ IE R + G K V Sbjct: 944 EDIKIFLISLKAGGTGLNLTS-ADMVIHFDPWWNPA-----IEDQATDRAHRIGQKNVVQ 997 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL-NALKKETI 203 V LI + +I+E +L K + + ++ L+ E + Sbjct: 998 VIKLITKESIEEKILLLQEDKKALIEDVITGELRDEGL 1035 >gi|108885078|ref|NP_072678.2| SNF2 family helicase putative [Mycoplasma genitalium G37] gi|94730430|sp|P47264|Y018_MYCGE RecName: Full=Uncharacterized ATP-dependent helicase MG018 gi|84626126|gb|AAC71234.2| helicase SNF2 family, putative [Mycoplasma genitalium G37] gi|166078676|gb|ABY79294.1| helicase SNF2 family, putative [synthetic Mycoplasma genitalium JCVI-1.0] Length = 1031 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 82/208 (39%), Gaps = 23/208 (11%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y K + + +++ + A N S +K + + + + K A Sbjct: 813 KLYDKQKTDGLKEIKESDAKNALNILSLILKLRHICS---LVKDNDVNDFEDNSKANAAL 869 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWNEGK 108 II + N +I+ F + ++ F +T+ IQ++N K Sbjct: 870 NIIYEALENKRKVILFTQFLDVIDCFKQTLKNQKIDHLVFDGRKTVKNRNTIIQKFNSAK 929 Query: 109 IP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P ++ A + G G+NL +++ F +WW+ +E R + G + V V Sbjct: 930 EPCVMLASLKAGGVGINLTA-AEVVIHFDVWWNSA-----VENQATDRAHRIGQSKTVQV 983 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y +IA+NTI+E V Q K + L Sbjct: 984 YRIIAKNTIEERVCQVQNQKQELVKKTL 1011 >gi|50548883|ref|XP_501912.1| YALI0C16643p [Yarrowia lipolytica] gi|49647779|emb|CAG82232.1| YALI0C16643p [Yarrowia lipolytica] Length = 1085 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 69/220 (31%), Gaps = 30/220 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY--------YDEEKHWKEVHDEK 55 Y F + +L+ S ++ N + + K Sbjct: 579 YKGFLKS--EELKSILAGKRQSLFGIDILRKICNHPDLASREILKKTADYYYGDPAKSGK 636 Query: 56 IKALEVI--IEKANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQ 102 ++ ++ + + K ++ L L+ F + K + Sbjct: 637 MQVVKALVDLWKKQGHRTLLFCQTRQMLEILEDFFANMPDIKYLRMDGTTPISKRQDMVD 696 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + L G G+NL G N ++ F W+ + R + G Sbjct: 697 TYNKDTSYDLFLLTTRVGGLGVNLT-GANRVIIFDPDWNPST-----DLQARERSWRLGQ 750 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 KR V VY L+ TI+E + R K + + +L K+ Sbjct: 751 KRNVVVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDAKQR 790 >gi|241640781|ref|XP_002410926.1| conserved hypothetical protein [Ixodes scapularis] gi|215503624|gb|EEC13118.1| conserved hypothetical protein [Ixodes scapularis] Length = 654 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 74/218 (33%), Gaps = 33/218 (15%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKI 56 QRE Y L ++ + +L N E K+ Sbjct: 351 IQREWYDRL--ASMRGGTPLATITLLKKLCNHPSLVRECFPDSGPTFKASTVMPELSGKL 408 Query: 57 ---KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 L II +++ ++ L ++ + T+ K + Sbjct: 409 KVLDCLLAIIRSTTDDKVVLISNYTQTLDVFERLCRERGYGFFRLDGSMTIKKRAKIVAA 468 Query: 104 WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N P + G GLNL G N LV F W+ + + R + G Sbjct: 469 FNVPSSPEFAFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN-----DAQAMARIWRDGQ 522 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K+ +VY L++ +I+E +LQR K + ++++ + Sbjct: 523 KKPCYVYRLVSSGSIEEKILQRQTHKKALSSCVVDSEE 560 >gi|150006238|ref|YP_001300982.1| helicase/SNF2 domain-containing protein [Bacteroides vulgatus ATCC 8482] gi|149934662|gb|ABR41360.1| helicase with SNF2 domain [Bacteroides vulgatus ATCC 8482] Length = 762 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 71/205 (34%), Gaps = 20/205 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLA-NGAVYYDEEKHWKEVHDEKIKA 58 + Y K ++ + S + ++ Q N ++ + K Sbjct: 545 EIYSKVRKTFLLAMSDGTSGRLTSIALEGLLRLRQCCVNTSLLPLSLSGKAIIDSSKFNF 604 Query: 59 LEVIIEKA--NAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEG 107 +I+ +++ F S L L K G T ++ N+ Sbjct: 605 AIKLIKDFVSQNHKVLLFSQFTSALELLIKHPKLKELNPLILTGETRNRQTLVNTFQNDP 664 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ + G GLNL + ++ WW+ +E R + G K V V Sbjct: 665 SATVMMVSIKAGGTGLNLTA-ADRVILLDDWWNPA-----VESQAFARTHRIGQKNDVKV 718 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQD 192 Y L+ ++T++E +L+ + K + + Sbjct: 719 YRLVCKDTVEEKILELHKNKEEMSE 743 >gi|296138502|ref|YP_003645745.1| SNF2-related protein [Tsukamurella paurometabola DSM 20162] gi|296026636|gb|ADG77406.1| SNF2-related protein [Tsukamurella paurometabola DSM 20162] Length = 1081 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 73/208 (35%), Gaps = 22/208 (10%) Query: 4 YHKFQRELYCDL----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + + L + F +LA DEE ++V K+ L Sbjct: 863 YDRILADQRAKLLGLLDDFDGNRFEILRSLTMLRRLALDPSLVDEELAVEDV--AKLDYL 920 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARL--------QKAFPQGRTLDKDPCTIQEWNEGKI 109 +++ ++V F L + + + I+++ G++ Sbjct: 921 AEKLDELLEEKHAVLVFSQFTGFLRKAAERLDEEGVEYAYLDGSTTDRAAAIEKFTSGEV 980 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL + WW+ E + R + G R+V VY Sbjct: 981 QVFLISLKAGGFGLNL-VQADYCFLLDPWWNPAA-----EAQAIDRAHRIGQTRSVMVYR 1034 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L++ TI++ V++ K+ + + ++ Sbjct: 1035 LVSAGTIEDKVMELKERKAALFESVVGG 1062 >gi|157103787|ref|XP_001648130.1| helicase [Aedes aegypti] gi|108880485|gb|EAT44710.1| helicase [Aedes aegypti] Length = 1027 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QRE Y + ++I+ N A K ++ + N + + Sbjct: 379 KMQREWYTKILMKDIDIVNGAGKMEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDYH 438 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDK 96 + K+ L+ ++ + + ++V L L+ + Sbjct: 439 LLENSGKMVVLDKLLTKLQEQGSRVLVFSQMTRMLDILEDYCYWRGYQYCRLDGQTPHED 498 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+N + + G G+NL ++++ + W+ + ++ + Sbjct: 499 RTKMIDEYNAENSSKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 552 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI +NT++E +++R K + L++ + Sbjct: 553 RAHRIGQKKQVRVFRLITENTVEEKIVERAEIKLKLDKLVIQQGR 597 >gi|148266412|ref|YP_001233118.1| non-specific serine/threonine protein kinase [Geobacter uraniireducens Rf4] gi|146399912|gb|ABQ28545.1| Non-specific serine/threonine protein kinase [Geobacter uraniireducens Rf4] Length = 1164 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 63/184 (34%), Gaps = 18/184 (9%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 + + ++ Q+ A + E + + + +V F S L + Sbjct: 968 ALTAILRLRQICLSAALVTAGVKGESPKQECLADNLLELRD-EGHSALVFSQFTSYLDLV 1026 Query: 85 QKAFPQ----------GRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILV 133 ++ Q + + ++++ + + P + + G GLNL + Sbjct: 1027 EEGLKQRGLATLRLDGSTPVPRRKELVRQFQQSEEPLVFLISLKAGGKGLNLTR-ATYVY 1085 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 WW+ +E R + G V V L+ ++T++E ++ K + Sbjct: 1086 HLDPWWNPA-----VENQASDRAHRIGQTAQVTVNRLLMRHTVEEKMMALKERKLKLYRA 1140 Query: 194 LLNA 197 LL+ Sbjct: 1141 LLDD 1144 >gi|115371958|ref|ZP_01459270.1| helicase [Stigmatella aurantiaca DW4/3-1] gi|115370923|gb|EAU69846.1| helicase [Stigmatella aurantiaca DW4/3-1] Length = 857 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 73/210 (34%), Gaps = 23/210 (10%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + L+ E + F + + LA +DE+ + K++ + Sbjct: 635 KLYEAARIASILQLESRTEKDKRFVMLAALTRLRLLACHPKLWDED---SPLPSSKLERM 691 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 +E+ A + ++ F L + + ++ + G Sbjct: 692 VERVEELRAEGSRALIFSQFVRLLNLAGEALEARGITFQYLDGQTPAAERQARVEAFQRG 751 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL + ++ WW+ +E R + G R V V Sbjct: 752 EGDVFLISLKAGGTGLNLTA-ADHVIHLDPWWNPA-----VEDQATDRAHRIGQTRPVTV 805 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+++ TI+E +L K + LL+ Sbjct: 806 SRLVSEGTIEEAILALHAEKRELAMSLLSE 835 >gi|298571706|gb|ADI87858.1| hypothetical protein AKSOIL_0350 [uncultured bacterium Ak20-3] Length = 918 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 74/196 (37%), Gaps = 17/196 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 I + + Q+ N + +W++ K + ++ + + I++ Sbjct: 714 DQTPIPYLHVFTVLQLLKQICNHPALIRKTTNWRDGESGKFELFRSLLSEALESNHKIVI 773 Query: 74 AYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 + + +Q + K ++++ + ++ + + G G++ Sbjct: 774 YSQYLQMIEIIQNYLKELKVGHVVLTGKSQKRGDIVKKFQTDPEVKVFVGSLLAGGLGID 833 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L ++++ + WW+ + E R + G K V L+++ T++E + + + Sbjct: 834 LTA-ASVVIHYDRWWNASK-----ENQATDRVHRIGQKNFTQVIKLVSRGTLEEKIDRMI 887 Query: 185 RTKSTIQDLLLNALKK 200 K+++ + L ++ Sbjct: 888 AEKASLFNRFLERDEE 903 >gi|310824688|ref|YP_003957046.1| snf2/helicase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309397760|gb|ADO75219.1| SNF2/helicase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 1299 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 73/210 (34%), Gaps = 23/210 (10%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + L+ E + F + + LA +DE+ + K++ + Sbjct: 1077 KLYEAARIASILQLESRTEKDKRFVMLAALTRLRLLACHPKLWDED---SPLPSSKLERM 1133 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 +E+ A + ++ F L + + ++ + G Sbjct: 1134 VERVEELRAEGSRALIFSQFVRLLNLAGEALEARGITFQYLDGQTPAAERQARVEAFQRG 1193 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL + ++ WW+ +E R + G R V V Sbjct: 1194 EGDVFLISLKAGGTGLNLTA-ADHVIHLDPWWNPA-----VEDQATDRAHRIGQTRPVTV 1247 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+++ TI+E +L K + LL+ Sbjct: 1248 SRLVSEGTIEEAILALHAEKRELAMSLLSE 1277 >gi|115438260|ref|XP_001218021.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Aspergillus terreus NIH2624] gi|114188836|gb|EAU30536.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Aspergillus terreus NIH2624] Length = 1418 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + D +G ++ ++ +L N ++ + Sbjct: 796 KLYRQLMTHNKMVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEPVEDQMNPTRATNDL 855 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 856 LWRTAGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGLKYLRLDGSTKSDD 915 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 916 RSDLLKLFNAPGSEYFCFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQD 969 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+I+E +L+R + K + ++ A K Sbjct: 970 RAHRIGQKNEVRILRLITSNSIEEKILERAQFKLDMDGKVIQAGK 1014 >gi|47228866|emb|CAG09381.1| unnamed protein product [Tetraodon nigroviridis] Length = 1286 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 69/234 (29%), Gaps = 40/234 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYY-------------- 42 K + ++ L + + + ++ N + Sbjct: 649 KLTEEQRQVYRSFLDSKEVYQILNRDMQVFPGLIALRKICNHPDLFSGGPQFLRGVPEDQ 708 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAF 88 E++ K+ +E ++ +++ F + Sbjct: 709 LAQEDRFGFWKRSGKLIVVESLLRLWFRQGQRVLLFTQSRQMLNILEVFVRENNYSYLKM 768 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ I +N + I + G G+NL G N ++ + W+ Sbjct: 769 DGTTSISSRQPLIARYNEDNSIFIFLLTTKVGGLGVNLT-GANRVIIYDPDWNPST---- 823 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G + V +Y L+ TI+E + R K + + +L K+ Sbjct: 824 -DTQARERAWRIGQTQQVTIYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQR 876 >gi|68483838|ref|XP_714194.1| hypothetical protein CaO19.8240 [Candida albicans SC5314] gi|46435735|gb|EAK95111.1| hypothetical protein CaO19.8240 [Candida albicans SC5314] Length = 1055 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HDEK 55 + Y F + DL+ N ++ N + K K Sbjct: 557 ELYESFLQS--EDLESILKGKRNVLMGVDILRKICNHPDLVYRDTLMKRKNYGDPAKSGK 614 Query: 56 IKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------------FPQGRTLDKD 97 ++ L+ ++ ++ ++ L L+K + K Sbjct: 615 MQVLKNLLRLWQSENHKTLLFCQTRQMLDILEKFVANLSLINGGDFNYLRMDGSTPISKR 674 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + + + G G+NL G + ++ + W+ + R Sbjct: 675 QMLVDAFNQDPDMHVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DIQARERA 728 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR + +Y L+ +I+E + R K+ + + +L K+ Sbjct: 729 WRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILKDPKQR 773 >gi|157375524|ref|YP_001474124.1| non-specific serine/threonine protein kinase [Shewanella sediminis HAW-EB3] gi|157317898|gb|ABV36996.1| Non-specific serine/threonine protein kinase [Shewanella sediminis HAW-EB3] Length = 1090 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 68/234 (29%), Gaps = 52/234 (22%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-------------- 50 + Q+ + L G ++ +K Q+ Sbjct: 837 EEVQKAVM--LSGIKRNRLAISNALLKLRQVCCHPQLLKLSHSHISQTEGVTASNDESFQ 894 Query: 51 --------------------VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ--- 85 K+ L + I++ F S L + Sbjct: 895 SDDVTSFTQESVEQGLTEFATGSGKLNWLADKLPSMLAEGRRILIFSSFTSMLTLIGELL 954 Query: 86 -----KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ + + ++P+ + G GLNL ++++ WW+ Sbjct: 955 EQLAVTYVELTGKSRDRASLVKRFQQHEVPVFLISLKAGGAGLNLTA-ADVVIHMDPWWN 1013 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + G ++VFVY LI ++T++E + +K ++ + Sbjct: 1014 PAAEQ-----QASDRAHRIGQDKSVFVYKLICKDTVEERIQLLQESKQSLAQSI 1062 >gi|254518034|ref|ZP_05130090.1| DNA/RNA helicase [Clostridium sp. 7_2_43FAA] gi|226911783|gb|EEH96984.1| DNA/RNA helicase [Clostridium sp. 7_2_43FAA] Length = 1010 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 73/194 (37%), Gaps = 23/194 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL- 81 S K QL ++ + KIKA++ II++ + II+ F S L Sbjct: 814 ILSYLTKLRQLCLDPSLLIDDFKEE---SAKIKAVKEIIKETIDSNKKIIIFSQFTSVLK 870 Query: 82 ---------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + + E+N + + G GLNL +++ Sbjct: 871 KIGNKLEEDDINYLYLDGSIKAKERINLVDEFNNRDKNIFLISLKAGGVGLNLTS-ASVV 929 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V F WW+ R + G K V V LI+++TI+E +++ K + Sbjct: 930 VHFDPWWNPAVQD-----QATDRAHRIGQKNIVEVIKLISKDTIEEKIIKLQEEKKELIS 984 Query: 193 LLL--NALKKETIH 204 ++ +AL ET++ Sbjct: 985 KIIDGDALSGETLN 998 >gi|302697641|ref|XP_003038499.1| hypothetical protein SCHCODRAFT_72893 [Schizophyllum commune H4-8] gi|300112196|gb|EFJ03597.1| hypothetical protein SCHCODRAFT_72893 [Schizophyllum commune H4-8] Length = 1076 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 81/229 (35%), Gaps = 39/229 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEK 46 QR+ Y + ++I+A N + ++ ++ + Sbjct: 422 DMQRKWYRSVLEKDIDAVNGLTGKKEGKTRLMNMVMQLRKVTCHPYLFDGAEPGPPYTTD 481 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTL 94 + K+ L+ ++ K + +++ + L G Sbjct: 482 EHLVENCGKMLILDKLLKSMKEKGSRVLIFSQMSRMLDILEDYCLFRGYKYCRIDGGTAH 541 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D I E+N+ + + G G+NL +I+V + W+ + + Sbjct: 542 DDRITAIDEYNKPDSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQA 595 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G + V+V+ I + +++E +L+R K + L++ +++ Sbjct: 596 MDRAHRIGQTKQVYVFRFITEGSVEERMLERAAQKLRLDQLVIQQGRQQ 644 >gi|63991035|gb|AAY40920.1| unknown [Homo sapiens] Length = 367 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 83/230 (36%), Gaps = 40/230 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 143 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 202 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 203 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 262 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 263 DGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 317 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ + R + G + V V+ I NT++E +++R K + +++ Sbjct: 318 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQ 366 >gi|328872835|gb|EGG21202.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1993 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 77/217 (35%), Gaps = 27/217 (12%) Query: 2 KQYHKFQRELYCDLQGENIE---AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + + L E A + V+ ++ N + +E++ + + + Sbjct: 1245 KMYQLIRSKSVNKLNQEEGAPRLARGLKNTLVQLRKVCNHPYLFYDEEYAIDEYMIRSAG 1304 Query: 59 LEVIIEKA------NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 +++K + +++ + L+ F ++ + Sbjct: 1305 KFDLLDKILPKLKASGHRVLIFSQMTHLIDILEHYFTYKGYKYLRLDGSTKSEERGPMLN 1364 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G GLNLQ + ++ F W+ + ++ R + G Sbjct: 1365 LFNAPGSDLFIFVLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDLQAQDRAHRIG 1418 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V L+ N+++E +L R K + ++ A Sbjct: 1419 QKQTVKVLRLVTVNSVEEKILARAIFKKELDKKIIQA 1455 >gi|260815483|ref|XP_002602502.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae] gi|229287813|gb|EEN58514.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae] Length = 700 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 76/234 (32%), Gaps = 46/234 (19%) Query: 3 QYHKFQRELY--CDLQGENIEAF--NSASKTVKCLQLANGAVYYDE-------------- 44 Y + L ++ + + +L N E Sbjct: 376 LYKHMVQSKLVQAQLDKSKSGKVTGSAFTAITQLKKLCNHPSLIYEKCLEGDEGLDGALD 435 Query: 45 -------EKHWKEVHDEKIKALEVIIEKANA---APIIVAYHFNSDLARLQKAFPQ---- 90 KH + K+ L+ I+ + +++ ++ L +K Sbjct: 436 LFPEKYSPKHIQPELSGKMLVLDYILAMTKSKTSDKVVLVSNYTQTLDLFEKLCRSRGYL 495 Query: 91 ------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 T+ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 496 YVRLDGSMTIKKRAKVVERFNNPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPA 554 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ ++Y L+A TI+E + QR K + +++ Sbjct: 555 N-----DEQAMARVWRDGQKKQCYIYRLLATGTIEEKIFQRQAHKKALSSCVVD 603 >gi|50303907|ref|XP_451901.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641033|emb|CAH02294.1| KLLA0B08327p [Kluyveromyces lactis] Length = 1534 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 73/227 (32%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDL-----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 K Y + + + + + ++ ++ ++ N ++E + Sbjct: 938 KLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETN 997 Query: 52 -----HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 K + LE I+ K +++ + + ++ Sbjct: 998 DTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKS 1057 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D + +N + G GLNLQ + ++ F W+ + + Sbjct: 1058 DDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 1111 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L + K I ++ A K Sbjct: 1112 QDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGK 1158 >gi|189190036|ref|XP_001931357.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972963|gb|EDU40462.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1760 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 74/200 (37%), Gaps = 25/200 (12%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK----EVHDEKIKALEVIIEK--ANA 68 L+ + A + + K Q N + + K+ L+ ++++ AN Sbjct: 1447 LEAKTESA--ALTVCNKLPQPTNERTRFTHIEAPSMSRFVTDSGKLAQLDALLKELKAND 1504 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLFAHPA 117 +++ + + +++ + ++ I + Sbjct: 1505 HRVLLYFQMTRMMDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQSDRSIFVFLLSTR 1564 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + ++F+ W+ I+ + R + G R V VY LI + TI+ Sbjct: 1565 AGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHRLGQTRQVTVYRLITRGTIE 1618 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E + +R K +Q ++++ Sbjct: 1619 ERIRKRALQKEEVQRVVISG 1638 >gi|146412556|ref|XP_001482249.1| hypothetical protein PGUG_05269 [Meyerozyma guilliermondii ATCC 6260] Length = 593 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 81/227 (35%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYC-----DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--- 53 K Y + + D G+ I N+ ++ ++ ++ N Y+E ++ Sbjct: 244 KLYQQMLKYNLLFSSNPDGDGKPIAIKNTNNQIMQLRKICNHPFVYEEVENMINPTADTN 303 Query: 54 -------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARL----------QKAFPQGRTL 94 K + L+ I+ K +++ + + + Sbjct: 304 DEIWRVAGKFELLDRILPKLKATGHRVLIFFQMTLIMNIMEDFLRLRDLKYMRLDGATKA 363 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ +NE + G GLNLQ + ++ F W+ + + Sbjct: 364 DDRTGLLKLFNEENSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQ-----DLQA 417 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++++E++L+R K I ++ A K Sbjct: 418 QDRAHRIGQKNEVRIIRLITEDSVEEMILERAHAKLEIDGKVIQAGK 464 >gi|148228303|ref|NP_001083868.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Xenopus laevis] gi|49899007|gb|AAH76715.1| ISWI protein [Xenopus laevis] Length = 1046 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEEKH- 47 +K Y K QRE Y + ++I+ NS + ++ + N +D + Sbjct: 403 IKIYVGLSKMQREWYTKILMKDIDILNSSGKTDKMRLLNILMQLRKCCNHPYLFDGAEPG 462 Query: 48 -------WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 463 PPYTTDLHLATNSGKMMVLDKLLPKLKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 522 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +I +N + + G G+NL ++++ + W+ + Sbjct: 523 DGQTPHEERQESIIAYNAPGSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 577 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 578 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 629 >gi|260802348|ref|XP_002596054.1| hypothetical protein BRAFLDRAFT_202887 [Branchiostoma floridae] gi|229281308|gb|EEN52066.1| hypothetical protein BRAFLDRAFT_202887 [Branchiostoma floridae] Length = 791 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 17/166 (10%) Query: 43 DEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQ-----GRT 93 + + K++ L ++ + I+V ++ L +Q + Sbjct: 516 YDPNSSSPEYSGKLQVLADLLGSLYSEGPRERIVVVSNYTQTLDMVQVRYGYLRLDGSTP 575 Query: 94 LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K ++ +N+ + + G GLNL G + LV + + W+ + Sbjct: 576 TGKRQQIVERFNDKYCRDFVFLLSTKAGGVGLNL-IGASRLVLYDIDWNPAN-----DLQ 629 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G R V +Y LI TI+E + QR +K + +++A Sbjct: 630 AMARVWRDGQPRVVHIYRLITTGTIEEKIYQRQISKQGLSGAVVDA 675 >gi|123123061|emb|CAM19309.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Mus musculus] Length = 768 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 412 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 471 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 + K+ AL+ ++ K + +++ L L+ Sbjct: 472 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 531 Query: 98 ---------------------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I +N + + G G+NL ++++ Sbjct: 532 DGQTPHEEREDKFLEVELLGQREAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 590 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 591 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 645 Query: 195 LNALK 199 + + Sbjct: 646 IQQGR 650 >gi|320164135|gb|EFW41034.1| smarca2 protein [Capsaspora owczarzaki ATCC 30864] Length = 1466 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 65/201 (32%), Gaps = 36/201 (17%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH----------------DEKIKALEVIIEKAN--AAP 70 ++ ++ N ++ + H K + + ++ K + Sbjct: 866 LMQLRKICNHPFLFETLERGVSRHMGFGGAIITGSLVVRASGKFEMFDRLLTKLHRTGHR 925 Query: 71 IIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGKIPL--LFAHPAS 118 +++ L L+ D+ + ++N P + Sbjct: 926 VLLFSQMTQCLTILEDYCNYNNILYLRLDGNTKPDERAELLTKFNAPNSPYNLFLLSTRA 985 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNLQ + +V F W+ + + R + G K V V + ++++E Sbjct: 986 GGLGLNLQT-ADTVVIFDSDWNPHQ-----DLQAQDRAHRIGQKNEVRVIRFVTADSVEE 1039 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +L + K + ++ A K Sbjct: 1040 RMLAAAQFKLDMDKKVIQAGK 1060 >gi|302816250|ref|XP_002989804.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii] gi|300142370|gb|EFJ09071.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii] Length = 2150 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 72/216 (33%), Gaps = 31/216 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVH----- 52 + Y + Y L+ + + ++ ++ N E + +H Sbjct: 943 EYYRALLTKNYQLLRQGTKSQQSMINIIMQLRKVCNHPYLIPGTEPESGTGEFLHEMRIK 1002 Query: 53 -DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKD 97 K+ L ++ K +++ L L+ + + Sbjct: 1003 ASAKLTLLHSMLGSLKKEGHRVLIFSQMTKLLDILEDYLTFEFGHDSYERVDGSVPVAER 1062 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N+ + SCG G+NL + ++ + ++ + + R Sbjct: 1063 QAAIRRYNKDTSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNP-----HADIQAMNRA 1116 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + + VY L+ + +++E +L + K ++ Sbjct: 1117 HRIGQSKKLLVYRLLVRGSVEERILHLAKKKLELEQ 1152 >gi|126277710|ref|XP_001370967.1| PREDICTED: similar to INO80 complex homolog 1 [Monodelphis domestica] Length = 1558 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 70/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1085 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1144 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1145 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1203 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR KS IQ ++++ Sbjct: 1204 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRANEKSEIQQMVISG 1253 >gi|326479960|gb|EGE03970.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97] Length = 1688 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1401 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1460 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1461 TVLDFQQRPEIFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1514 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1515 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1553 >gi|313238906|emb|CBY13901.1| unnamed protein product [Oikopleura dioica] Length = 769 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 72/215 (33%), Gaps = 23/215 (10%) Query: 2 KQYHKFQR-ELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 + Y ++ + D + ++ N + ++ ++ N E K + Sbjct: 226 QLYKHMKQGYMLMDTNDKKNKSGNKALMNTIMQLRKICNHPFITTCEGVPLVRAAGKFEL 285 Query: 59 LEVIIEKAN--AAPIIVAYHFNS-DLARLQKAFPQGRTLDK---------DPCTIQEWN- 105 ++ I+ K +++ L G + ++++N Sbjct: 286 MQRILPKMKATGHKVLIFTQMTQAILLMEDYFNFYGYKYLRLDGSTKADDRGELLKKFNA 345 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G GLNLQ + ++ F W+ + R + G K Sbjct: 346 VNSDYDVFVLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQDRAHRIGQKNE 399 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V + +++E +L R K T+ + ++ A K Sbjct: 400 VRVLRFVTSQSVEERILAAARYKLTVDEKVIQAGK 434 >gi|302811536|ref|XP_002987457.1| hypothetical protein SELMODRAFT_158748 [Selaginella moellendorffii] gi|300144863|gb|EFJ11544.1| hypothetical protein SELMODRAFT_158748 [Selaginella moellendorffii] Length = 1292 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 30/225 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE--------- 54 Y Y L + + + ++ ++ D + E D Sbjct: 527 YRAVLTRNYEVLSRHSGVQVSLNNLVMELRKICAHPFLLDGVEEETEDEDAVQKTLVEAS 586 Query: 55 ---KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 + KA +++ F L L+ + I Sbjct: 587 GKLLLLDKMTTKLKAEGHRVLIYSQFQRVLDILEDWLAYKNWNYERIDGKVSGADRQSRI 646 Query: 102 QEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G G+NL + +V + W+ + + R + Sbjct: 647 DRFNAPGSKIFCFLLSTRAGGLGINL-ATADTVVIYDSDWNP-----HADMQAMARAHRM 700 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G V +Y LI + TI+E ++Q + K ++ L++ +K + ++ Sbjct: 701 GQTSKVMIYRLITRGTIEERMMQLSKKKMVLEHLVVGRMKTQILN 745 >gi|219110099|ref|XP_002176801.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411336|gb|EEC51264.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 711 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 71/241 (29%), Gaps = 56/241 (23%) Query: 13 CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVH--------------- 52 L + + + ++ N + Sbjct: 248 AFLLSDEVTKVVKGSKQLFAAVTMLRKICNHPDLACDPDEASFESFVRNGYVNQGDLDED 307 Query: 53 -----------------DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP---- 89 K++ L I+ K +++ + L +++ Sbjct: 308 LSDLDSDIGEEKSLVERSGKLEVLSKILPLWKKQGHRVLIFCQWRKMLDIIERLIMLKEW 367 Query: 90 ------QGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + ++N + + + G GLNL G N ++ + W+ + Sbjct: 368 KFGRLDGNTNVASRQRLVDQFNSDESYFGMLCTTRTGGVGLNLT-GANRIILYDPDWNPQ 426 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +R V VY LI TI+E + QR K+ + + +L ++ Sbjct: 427 T-----DAQARERAWRFGQEREVTVYRLITAGTIEEKIYQRQIFKTALSNKVLQDPRQRR 481 Query: 203 I 203 + Sbjct: 482 L 482 >gi|45190977|ref|NP_985231.1| AER375Cp [Ashbya gossypii ATCC 10895] gi|44984045|gb|AAS53055.1| AER375Cp [Ashbya gossypii ATCC 10895] Length = 1288 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 73/227 (32%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVH---- 52 + Y + + + A +K ++ ++ N +DE + Sbjct: 711 QLYQQMLKHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEVEGVVNPTRTNS 770 Query: 53 ------DEKIKALEVIIEKAN--AAPIIVAYH----------FNSDLARLQKAFPQGRTL 94 K + L+ ++ K +++ + F Sbjct: 771 SLLYRVSGKFELLDRVLPKFKATGHRVLMFFQMTQVMDIMEDFLQMKNLKYMRLDGATKA 830 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + +N + G GLNLQ + ++ F W+ + + Sbjct: 831 EERTGMLNAFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 884 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 885 QDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 931 >gi|326468559|gb|EGD92568.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] Length = 1686 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1399 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1458 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1459 TVLDFQQRPEIFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1512 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1513 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1551 >gi|294897357|ref|XP_002775945.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239882312|gb|EER07761.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 1009 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 25/204 (12%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYY------DEEKHWKEVHDEKIKALEVII--EKANA 68 G+ S ++ N + + E K+ L I+ Sbjct: 552 GKTTLPPESLFYLGILRRICNHPDMLLYPGVQADGGYGSEQRSGKLSVLLKILDKWVPQG 611 Query: 69 APIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPC-TIQEWNEGK-IPLLFAHPA 117 +++ L + G T KD + ++N + L+ Sbjct: 612 HRVLIFSQTLGMLDILERKVDEKGWTCSRMDGSTPVKDRAHIVDDFNSPEGPQLMLLSTR 671 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G GLNL G + +V F W+ + R + G K V +Y LIA T++ Sbjct: 672 VGGVGLNLT-GADRIVIFDPDWNPMT-----DAQARERAWRIGQKNEVLIYRLIAMGTVE 725 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E + ++ K + +L+ ++ Sbjct: 726 ESMYKKQIFKHYLSQKILSDPRQR 749 >gi|225557819|gb|EEH06104.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Ajellomyces capsulatus G186AR] Length = 1423 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 70/225 (31%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + ++ +L N ++ + Sbjct: 782 KLYKQLATHNKLIVSDGKGGKTGVRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 841 Query: 55 ------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 842 IWRTAGKFELLDRILPKFQASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 901 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 902 RSDLLKEFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 955 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+ + K + ++ A K Sbjct: 956 RAHRIGQKNEVRILRLITSNSVEERILEAAQFKLDMDGKVIQAGK 1000 >gi|163751730|ref|ZP_02158948.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Shewanella benthica KT99] gi|161328382|gb|EDP99541.1| SNF2-related:Helicase, C-terminal:SWIM Zn-finger [Shewanella benthica KT99] Length = 1077 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 69/220 (31%), Gaps = 38/220 (17%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------------------E 44 + ++ + G ++ +K Q+ Sbjct: 839 EEMRK--AVSVSGVKRNRLAISNALLKLRQVCCHPDLLKLDYIEPSDLANADLADPNSAN 896 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQK--------AFPQGRTL 94 + K+ L + +++ F S L+ + + Sbjct: 897 GVQPLDTRSGKLNWLAAKLPGMLEEGRRVLIFSSFTSMLSLIGELLEKLGISFVELTGKS 956 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + + ++P+ + G GLNL ++++ WW+ Q Sbjct: 957 RDRGALVERFQQREVPIFLISLKAGGAGLNLTA-ADVVIHIDPWWNPAAEQ-----QASD 1010 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G ++VFVY LI ++T++E + +K + + Sbjct: 1011 RAHRIGQDKSVFVYKLICKDTVEERIQLLQESKHNLAQSI 1050 >gi|123468950|ref|XP_001317690.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] gi|121900430|gb|EAY05467.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] Length = 1439 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 27/226 (11%), Positives = 66/226 (29%), Gaps = 38/226 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT----VKCLQLANGAVYYDEEKHWKE-------- 50 Y + +L + + + ++ ++ + + Sbjct: 581 LYRSLIEQKIPELAASDSSHRRALPELPNLAMQLRKVCCHPYLIQDYEKIIGDVLQGMSE 640 Query: 51 -----VHDEKIKALEVIIEKAN--AAPIIVAYHFNS----------DLARLQKAFPQGRT 93 K+ ++ ++ K + I++ F + G Sbjct: 641 FDQLVKCSGKMVFVDKLLGKLHPLGKKILIFSQFKHVLDIISQFLDMRNYKYERIDGGSH 700 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + +N+ I + + G GLNL + ++ F W+ + + Sbjct: 701 GNDRQKKMDRFNDPTQDIFVFLLSTRAGGLGLNLTA-ADTVIIFDSDWNPQN-----DVQ 754 Query: 152 GVTRQRQAGFK-RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G V VY LI + T + + R K + +L+ Sbjct: 755 AQARCHRIGQTAEKVVVYRLITRGTYESEMFDRASKKLGLDQAVLD 800 >gi|73999785|ref|XP_535436.2| PREDICTED: similar to yeast INO80-like protein isoform 1 [Canis familiaris] Length = 1519 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1046 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1105 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1106 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1164 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1165 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1214 Score = 35.1 bits (79), Expect = 5.3, Method: Composition-based stats. Identities = 13/134 (9%), Positives = 34/134 (25%), Gaps = 3/134 (2%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVII 63 + Q + + ++ ++ N ++ ++ W H K + I Sbjct: 747 EDLLQSSMGSTQQAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQISKFI 806 Query: 64 EKANAAPIIVAY--HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + + + L +L +E + + PA + Sbjct: 807 YRHGQIRVFNHSRDRWLRVLLSPFAPDYIQESLFHRKGVNEESCFSFLRFIDVSPAEMAN 866 Query: 122 GLNLQYGGNILVFF 135 + L F Sbjct: 867 LMLQGLLARWLALF 880 >gi|302796603|ref|XP_002980063.1| hypothetical protein SELMODRAFT_177985 [Selaginella moellendorffii] gi|300152290|gb|EFJ18933.1| hypothetical protein SELMODRAFT_177985 [Selaginella moellendorffii] Length = 1274 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 30/225 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE--------- 54 Y Y L + + + ++ ++ D + E D Sbjct: 527 YRAVLTRNYEVLSRHSGVQVSLNNLVMELRKICAHPFLLDGVEEETEDEDAVQKTLVEAS 586 Query: 55 ---KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 + KA +++ F L L+ + I Sbjct: 587 GKLLLLDKMTTKLKAEGHRVLIYSQFQRVLDILEDWLAYKNWNYERIDGKVSGADRQSRI 646 Query: 102 QEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G G+NL + +V + W+ + + R + Sbjct: 647 DRFNAPGSKIFCFLLSTRAGGLGINL-ATADTVVIYDSDWNP-----HADMQAMARAHRM 700 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G V +Y LI + TI+E ++Q + K ++ L++ +K + ++ Sbjct: 701 GQTSKVMIYRLITRGTIEERMMQLSKKKMVLEHLVVGRMKTQILN 745 >gi|156841074|ref|XP_001643913.1| hypothetical protein Kpol_1067p28 [Vanderwaltozyma polyspora DSM 70294] gi|156114542|gb|EDO16055.1| hypothetical protein Kpol_1067p28 [Vanderwaltozyma polyspora DSM 70294] Length = 1053 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 63/211 (29%), Gaps = 29/211 (13%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYD------EEKHWKEVHDEKIKALEVII--EK 65 +L ++ N + + + K++ ++ ++ K Sbjct: 583 ELGQIQNGKRQVLYGIDILRKICNHPDLLEKENRTLNKAYGDPKRSGKMQVVKQLLLLWK 642 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---------------DPCTIQEWNEGKIP 110 ++ L L+ K + ++N Sbjct: 643 KEGHKTLLFTQSRQMLDVLEDFISFKDEDLKGFKYLRMDGTTNISHRQSLVDKFNNENYD 702 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G + ++ F W+ R + G KR V +Y L Sbjct: 703 VFLLTTRVGGLGVNLT-GADRIIIFDPDWNPSTDM-----QARERAWRIGQKREVSIYRL 756 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + R K + + +L K++ Sbjct: 757 LITGTIEEKIYHRQLFKQFLTNKILTDPKQK 787 >gi|255935291|ref|XP_002558672.1| Pc13g02310 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583292|emb|CAP91300.1| Pc13g02310 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1908 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 77/250 (30%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKE------ 50 K + F ++ +L + A + +L N +E H + Sbjct: 1582 KLFEDFTKKEQKELADKVGSADRGDKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQSF 1641 Query: 51 -----------VHDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL+ ++ + +V Sbjct: 1642 LSAKRSNIRDVSHAPKLNALKDLLVDCGIGLDHTAEGELDTGASYVSPHRALVFCQMKEM 1701 Query: 81 LAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L G K + +N + +L + G GLNL Sbjct: 1702 LDIVQNDVLKKLLPSVQYLRLDGGVEATKRQDIVNRFNTDPSYDVLLLTTSVGGLGLNLT 1761 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1762 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1815 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1816 KIDVASTVVN 1825 >gi|149635666|ref|XP_001513276.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 [Ornithorhynchus anatinus] Length = 1012 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NSA K ++ + N + Sbjct: 370 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 429 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 430 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQDSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 489 Query: 93 ----TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 490 DGQTPHDERQDSINAYNEPNSSKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ---- 544 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 545 -VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 596 >gi|56118945|ref|NP_001007993.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Xenopus (Silurana) tropicalis] gi|51704071|gb|AAH80870.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Xenopus (Silurana) tropicalis] Length = 1049 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 83/233 (35%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 406 IKIYVGLSKMQREWYTKILMKDIDILNSSGKTDKMRLLNILMQLRKCCNHPYLFDGAEPG 465 Query: 43 --DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 466 PPYTTDMHLVTNSGKMVVLDKLLPRLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 525 Query: 93 ----TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +I +N + + G G+NL ++++ + W+ + Sbjct: 526 DGQTPHEERQDSIIAYNAPGSSKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 580 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 581 -VDLQAMDRAHRIGQTKTVRVFRYITDNTVEERIVERAEMKLRLDSIVIQQGR 632 >gi|315048263|ref|XP_003173506.1| hypothetical protein MGYG_03681 [Arthroderma gypseum CBS 118893] gi|311341473|gb|EFR00676.1| hypothetical protein MGYG_03681 [Arthroderma gypseum CBS 118893] Length = 1358 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + D +G ++ ++ +L N +D + Sbjct: 784 KLYKQLVTHNKLAVSDGKGGKTPVRGLSNMLMQLRKLCNHPFVFDSVEEELNPGKATNDL 843 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K + +++ + + ++ Sbjct: 844 IWRTAGKFELLDRILPKFLASGHRVLMFFQMTQIMNIMEDFMRFRGMKYLRLDGATKSDD 903 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +NE + G GLNLQ + ++ + W+ + + Sbjct: 904 RSDLLKRFNEPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 957 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 958 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1002 >gi|260948588|ref|XP_002618591.1| hypothetical protein CLUG_02050 [Clavispora lusitaniae ATCC 42720] gi|238848463|gb|EEQ37927.1| hypothetical protein CLUG_02050 [Clavispora lusitaniae ATCC 42720] Length = 1186 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 65/234 (27%), Gaps = 45/234 (19%) Query: 3 QYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------EEKHWKEVH 52 Y KF + ++G ++ N D + Sbjct: 687 MYEKFLGSEDAAAIMKG----RRRVLMGVDILRKICNHPDLVDRTALLHKKGYNYGSPAR 742 Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDL----------------------ARLQKAF 88 K++ ++ +A ++ L Sbjct: 743 SGKMQVARQLLQLWQAQGHRTLLFCQTRQMLDILERFVARMSCIDAQGAETSNPMRYLRM 802 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + K + +N + G G+NL G + ++ F W+ Sbjct: 803 DGSTPIGKRQQLVDTFNANEYYHVFLLTTKVGGLGVNLT-GADRVIIFDPDWNPST---- 857 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G KR + +Y L+ TI+E + R K+ + + +L K+ Sbjct: 858 -DIQARERAWRLGQKRDITIYRLMTAGTIEEKIYHRQIFKTFLTNKILKDPKQR 910 >gi|309360381|emb|CAP31417.2| CBR-RAD-54 protein [Caenorhabditis briggsae AF16] Length = 1079 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 80/237 (33%), Gaps = 47/237 (19%) Query: 3 QYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------------- 44 Y+K +++ + + A ++ S +L N E Sbjct: 734 LYNKLIECEKQNRITEKDKGATA-SALSFITHLKKLCNHPYLVYEELQKPDNRFRTKCLS 792 Query: 45 -------EKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAF------ 88 K + K+K L+ I+ K ++ ++ + + Sbjct: 793 VFPEAFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMALCKLRGYD 852 Query: 89 ----PQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 ++ + + +N+ I + G GLNL G N LV F W+ Sbjct: 853 FVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNL-IGANRLVMFDPDWNPA 911 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + R + G K+ F+Y L+A +I+E + QR K + +++A + Sbjct: 912 N-----DDQAMARVWRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAGE 963 >gi|255692899|ref|ZP_05416574.1| Snf2 family helicase [Bacteroides finegoldii DSM 17565] gi|260621348|gb|EEX44219.1| Snf2 family helicase [Bacteroides finegoldii DSM 17565] Length = 1010 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 21/206 (10%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + L L F+ + ++ QLA + +I Sbjct: 793 YEQEKNSLRNILLQHPQSTDKLHSFSVLNGILRLRQLACHPQLIFPDFTGSSGKTAQIIE 852 Query: 59 LEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + ++ +++ F L + A G T D+ + + Sbjct: 853 TFDTL-RSEGHKVLIFSSFVKHLEVLAEAFQERGWKYALLTGATNDRPSEIAHFTEQKDV 911 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL + + WW+ E + R + G + V Y Sbjct: 912 QAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAYR 965 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I Q +I+E +LQ K + + + Sbjct: 966 FITQGSIEEKILQLQDEKRKLAETFV 991 >gi|323452052|gb|EGB07927.1| hypothetical protein AURANDRAFT_26802 [Aureococcus anophagefferens] Length = 1012 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 28/233 (12%), Positives = 77/233 (33%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSA---------SKTVKCLQLANGAVYY------ 42 +K Y + QR Y + ++ N+ + ++ ++ N + Sbjct: 357 VKLYIGMTEMQRLWYTKILSKDAHTLNALGGPDRVQLLNILMQLRKVCNHPYLFEGAEPG 416 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAF 88 + + K+ + ++ K A + +++ L Sbjct: 417 PPFMDGPHLWENTGKLVLMSKLLPKLMAQDSRVLIFSQMTRMLDILEDYMRLNQYKYCRI 476 Query: 89 PQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + D + +N + G G+NL +I+V + W+ + Sbjct: 477 DGSTSGDDRDSQMDVFNAPGSEKFAFLLSTRAGGLGINL-ATADIVVLYDSDWNPQ---- 531 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ + + T++E +++R K + ++ + Sbjct: 532 -VDLQAMDRAHRIGQTKPVTVFRFVTEGTVEEKIIERADRKLFLDAAVIQQGR 583 >gi|317138645|ref|XP_001817051.2| chromatin structure-remodeling complex subunit snf2 [Aspergillus oryzae RIB40] Length = 1422 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 K Y + + D +G ++ ++ +L N ++ + Sbjct: 797 KLYKQLVTHNKMAVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEPVEDQMNPGRGTNDL 856 Query: 53 ----DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 857 LWRTSGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 916 Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + + G GLNLQ + ++ F W+ + + Sbjct: 917 RSDLLKLFNAENSEYFCFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQD 970 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 971 RAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1015 >gi|315048299|ref|XP_003173524.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Arthroderma gypseum CBS 118893] gi|311341491|gb|EFR00694.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Arthroderma gypseum CBS 118893] Length = 1692 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1405 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1464 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1465 TVLDFQQRPEIFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1518 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1519 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1557 >gi|256027374|ref|ZP_05441208.1| SWF/SNF family helicase [Fusobacterium sp. D11] gi|289765340|ref|ZP_06524718.1| SWF/SNF family helicase [Fusobacterium sp. D11] gi|289716895|gb|EFD80907.1| SWF/SNF family helicase [Fusobacterium sp. D11] Length = 1088 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 67/203 (33%), Gaps = 21/203 (10%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--AN 67 E N + K Q+ E+ KI A +I+K N Sbjct: 878 ETLAQSIDVNTNKIEVLAMLTKLRQICIDPRLLYED---ISSSSSKINACIELIKKSIEN 934 Query: 68 AAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 I++ F + L K ++++ +PL Sbjct: 935 KQRILLFSSFTTVLDLVAQECDNLSIPYFMLTGETNKVKRNQLVEDFQNEAVPLFLISLK 994 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL ++++ WW++ R + G + V V+ LI +NTI+ Sbjct: 995 AGGTGLNLTK-ASVVIHLDPWWNISAQ-----NQATDRAHRIGQEDTVQVFNLITKNTIE 1048 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 E +L K + D+ + K Sbjct: 1049 EKILNLQNKKKELSDIFVENSKG 1071 >gi|83764905|dbj|BAE55049.1| unnamed protein product [Aspergillus oryzae] Length = 1417 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 K Y + + D +G ++ ++ +L N ++ + Sbjct: 792 KLYKQLVTHNKMAVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEPVEDQMNPGRGTNDL 851 Query: 53 ----DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 852 LWRTSGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 911 Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + + G GLNLQ + ++ F W+ + + Sbjct: 912 RSDLLKLFNAENSEYFCFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQD 965 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 966 RAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1010 >gi|327300573|ref|XP_003234979.1| RSC complex subunit Sth1 [Trichophyton rubrum CBS 118892] gi|326462331|gb|EGD87784.1| RSC complex subunit Sth1 [Trichophyton rubrum CBS 118892] Length = 1352 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + D +G ++ ++ +L N +D + Sbjct: 778 KLYKQLVTHNKLAVSDGKGGKTPVRGLSNMLMQLRKLCNHPFVFDSVEEELNPGKATNDL 837 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K + +++ + + ++ Sbjct: 838 IWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFMRFRGMKYLRLDGATKSDD 897 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +NE + G GLNLQ + ++ + W+ + + Sbjct: 898 RSDLLRRFNEPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 951 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 952 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 996 >gi|308803887|ref|XP_003079256.1| putative helicase (ISS) [Ostreococcus tauri] gi|116057711|emb|CAL53914.1| putative helicase (ISS) [Ostreococcus tauri] Length = 869 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 67/188 (35%), Gaps = 25/188 (13%) Query: 32 CLQLANGAVYYDEEKHWK-----EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 QL + + + K++ L ++ + A + ++ + L L Sbjct: 665 LHQLCGDFMLQGALREKLLSPECGLESAKVQRLRELLVELKAKGSRALIFSQWKIMLDIL 724 Query: 85 QKAFPQ----------GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNIL 132 + +++ + ++N + + + G GLNL G + + Sbjct: 725 EWVLCHVGFSYARLDGDTAVEERQELVDKFNAKDSSLDTFLLSTRAGGQGLNLT-GADTV 783 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + ++ + I+R R + G ++ V VY + + T+DE ++ K + Sbjct: 784 ILHDCDFNPQ-----IDRQAEDRCHRLGQEKQVTVYRFVTEGTVDEKIVAIAEHKMNLGS 838 Query: 193 LLLNALKK 200 +L ++ Sbjct: 839 TILAEGEQ 846 >gi|281203153|gb|EFA77354.1| chromo domain-containing protein [Polysphondylium pallidum PN500] Length = 1842 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 77/222 (34%), Gaps = 29/222 (13%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKH--------WKEVH 52 K Y + + +L E + + + N ++ + Sbjct: 958 KYYRWILSKNFHELNKGVKGEKTTLLNIVAELKKTCNHPYLFENAEDLNAENPLDAMVKA 1017 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCT 100 K+ L+ ++ K +++ L L + +K Sbjct: 1018 SGKLILLDKLLVRLKETGHRVLIFSQMVRMLDILADYLKGRGFLFQRLDGSTSREKRSQA 1077 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N P + G G+NL + ++ F W+ + + R + Sbjct: 1078 MDRFNAEGSPDFAFLLSTRAGGLGINL-STADTVIIFDSDWNPQN-----DLQAEARAHR 1131 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G K V +Y L++++TI+E +L+R + K + L++ +++K Sbjct: 1132 IGQKNTVNIYRLVSKSTIEEEILERAKQKMVLDHLVIQSMEK 1173 >gi|326444982|ref|ZP_08219716.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 1408 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 28/217 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-------DEEKHWKEVHD 53 Y E +++ A + ++ N + + Sbjct: 1175 LYQTVADETLREIRAAEGIARKGLLLKLFDQLQKICNAPEQFLAEPLDSTYDAERAAARS 1234 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCT 100 K+ AL+ ++ ++ + + RL Sbjct: 1235 GKLAALDDLLPTLSDPDESCLIFTRYRAMARRLVHHLQGHGISPLYFSGDISAGRDRQRV 1294 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + + + G GL L + ++ F W+ + Q I+R + G Sbjct: 1295 IDTFQNHPGQTMVITIKAGGTGLTLTQ-ASHVILFDRPWNPAKESQAIDR-----AHRLG 1348 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ L +NT+++ V + LR KS + D +L + Sbjct: 1349 QTRTVTVHQLTTENTLEDRVEELLRHKSALADAVLAS 1385 >gi|254389181|ref|ZP_05004410.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] gi|197702897|gb|EDY48709.1| SNF2/RAD54 family helicase [Streptomyces clavuligerus ATCC 27064] Length = 964 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 28/217 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYY-------DEEKHWKEVHD 53 Y E +++ A + ++ N + + Sbjct: 731 LYQTVADETLREIRAAEGIARKGLLLKLFDQLQKICNAPEQFLAEPLDSTYDAERAAARS 790 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCT 100 K+ AL+ ++ ++ + + RL Sbjct: 791 GKLAALDDLLPTLSDPDESCLIFTRYRAMARRLVHHLQGHGISPLYFSGDISAGRDRQRV 850 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + + + G GL L + ++ F W+ + Q I+R + G Sbjct: 851 IDTFQNHPGQTMVITIKAGGTGLTLTQ-ASHVILFDRPWNPAKESQAIDR-----AHRLG 904 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V V+ L +NT+++ V + LR KS + D +L + Sbjct: 905 QTRTVTVHQLTTENTLEDRVEELLRHKSALADAVLAS 941 >gi|83286456|ref|XP_730169.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Plasmodium yoelii yoelii str. 17XNL] gi|23489816|gb|EAA21734.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Plasmodium yoelii yoelii] Length = 2541 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 77/222 (34%), Gaps = 27/222 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEV------HD 53 ++ Y + Y L + A NS ++ ++ N E E Sbjct: 1175 IEYYKNILTKNYEQLAKASGGAKNSLQNICMELKKVCNHPFLCCEPIDKDEYRERLVYSS 1234 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTI 101 KI LE ++ K +++ L + T + + Sbjct: 1235 GKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRGFKHQRLDGTMTKEMRKKAM 1294 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G G+NL + ++ + W+ + + R + Sbjct: 1295 NHFNSKNSDDFVFLLSTKAGGLGINLTS-ADTVIIYDSDWNPQN-----DLQAGARAHRI 1348 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V +Y L+ +++I++ +L+R + K + L++ L K+ Sbjct: 1349 GQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKK 1390 >gi|325095549|gb|EGC48859.1| SNF2-family ATP dependent chromatin remodeling factor [Ajellomyces capsulatus H88] Length = 1423 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 74/225 (32%), Gaps = 33/225 (14%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + D +G ++ ++ +L N ++ + Sbjct: 782 KLYKQLATHNKLVVSDGKGGKTGVRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 841 Query: 55 ------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 842 IWRTAGKFELLDRILPKFQASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 901 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 902 RSDLLKEFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 955 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+ + K + ++ A K Sbjct: 956 RAHRIGQKNEVRILRLITSNSVEERILEAAQFKLDMDGKVIQAGK 1000 >gi|260943410|ref|XP_002616003.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720] gi|238849652|gb|EEQ39116.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720] Length = 879 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 70/239 (29%), Gaps = 45/239 (18%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-------------- 50 + A +L + Sbjct: 564 RALYEHFISSDDSSKLIASQPLKAIDMLKKLCTHPDLLSLPDDIQGSRKLIPDDYQSSEA 623 Query: 51 ---------VHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K LE + + I+V ++ L ++K Sbjct: 624 GGRGREIQTWFSAKFSILERFLHQIRTQTNDKIVVISNYTRTLDLIEKMCRYKRYGSLRL 683 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T++K + +N+ + + + G G+NL G N LV W+ Q Sbjct: 684 DGTMTINKRQKIVDRFNDPEGNEFIFLLSSKAGGCGINL-IGANRLVLMDPDWNPAADQ- 741 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G K+ F+Y + TI+E + QR K ++ +++A K++ + Sbjct: 742 ----QALARVWRDGQKKDCFIYRFMCTGTIEEKIFQRQSMKLSLSSCVVDA-KEDVERI 795 >gi|224125208|ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222871157|gb|EEF08288.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2332 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 77/222 (34%), Gaps = 33/222 (14%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHDEK 55 + Y + Y L+ G+ + + + ++ ++ N + + +H+ + Sbjct: 998 EYYRAMLTKNYQMLRNIGKGVAQQSMLNIVMQLRKICNHPYLIPGTEPDSGSLEFLHEMR 1057 Query: 56 --------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLD 95 + + I +++ L L+ ++ Sbjct: 1058 IKASAKLTLLHSMLKILYKEGHRVLIFSQMTKLLDILEDYLTIEFGPKTYERVDGSVSVS 1117 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ K + SCG G+NL + ++ + ++ + + Sbjct: 1118 DRQTAIARFNQDKSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNP-----HADIQAMN 1171 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1172 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1213 >gi|148696004|gb|EDL27951.1| INO80 complex homolog 1 (S. cerevisiae) [Mus musculus] Length = 1032 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 70/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 559 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 618 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ I + + G G+NL + ++F+ W+ Sbjct: 619 TYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 677 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 678 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 727 >gi|237744605|ref|ZP_04575086.1| SWF/SNF family helicase [Fusobacterium sp. 7_1] gi|229431834|gb|EEO42046.1| SWF/SNF family helicase [Fusobacterium sp. 7_1] Length = 1088 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 67/203 (33%), Gaps = 21/203 (10%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--AN 67 E N + K Q+ E+ KI A +I+K N Sbjct: 878 ETLAQSIDVNTNKIEVLAMLTKLRQICIDPRLLYED---ISSSSSKINACIELIKKSIEN 934 Query: 68 AAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 I++ F + L K ++++ +PL Sbjct: 935 KQRILLFSSFTTVLDLVAQECDNLSIPYFMLTGETNKVKRNQLVEDFQNEAVPLFLISLK 994 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL ++++ WW++ R + G + V V+ LI +NTI+ Sbjct: 995 AGGTGLNLTK-ASVVIHLDPWWNISAQ-----NQATDRAHRIGQEDTVQVFNLITKNTIE 1048 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 E +L K + D+ + K Sbjct: 1049 EKILNLQNKKKELSDIFVENSKG 1071 >gi|190347304|gb|EDK39551.2| hypothetical protein PGUG_03649 [Meyerozyma guilliermondii ATCC 6260] Length = 1117 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 72/230 (31%), Gaps = 41/230 (17%) Query: 3 QYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------EEKHWKEVH 52 Y KF +L+ L+G+ N + ++ N D + Sbjct: 610 MYEKFLSSEDLHAILKGK----RNMLTGVDTLRKICNHPDLVDRELLLRKKGYNYGIPNK 665 Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARL------------------QKAFPQGR 92 K+ L+ ++ ++ ++ L L Sbjct: 666 SGKMLVLKGLLQLWQSQGHRTLLFCQTKQMLDILEKLLVNLTRISDGTEYFNYMRMDGST 725 Query: 93 TLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K + +N + G G+NL G + ++ + W+ + Sbjct: 726 PISKRQGLVDMFNNNTNYDVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DIQ 779 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G KR + +Y L+ TI+E + R K+ + + +L K+ Sbjct: 780 ARERAWRLGQKRDIVIYRLMTAGTIEEKIYHRQIFKTFLTNKILKDPKQR 829 >gi|302817780|ref|XP_002990565.1| hypothetical protein SELMODRAFT_185367 [Selaginella moellendorffii] gi|300141733|gb|EFJ08442.1| hypothetical protein SELMODRAFT_185367 [Selaginella moellendorffii] Length = 1296 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 75/225 (33%), Gaps = 28/225 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK------ 55 + Y + Y L + + ++ +L E E + + Sbjct: 534 ELYKEILTRNYEALSKRGGPQVSLNNVVMELRKLCGHPYMVIEPDSKNEEEENRHRIESS 593 Query: 56 ----IKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTI 101 + ++ KA+ +++ F L + T + I Sbjct: 594 GKLSLLDKMMVKLKASGHRVLLYSQFQHMLDILEDYLTHKNWSYERIDGNVTGAERQIRI 653 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + G G+NL + +V + W+ + + R + Sbjct: 654 DRFNAPNSNRFCFLLSTRAGGLGINL-ATADTVVIYDSDWNP-----HADLQAMARAHRL 707 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G K V +Y L+ + +I+E ++Q + K ++ L++ +K + ++ Sbjct: 708 GQKNMVMIYRLVTRGSIEERMMQMTKKKMVLEHLVVGRMKTQVLN 752 >gi|302510453|ref|XP_003017178.1| hypothetical protein ARB_04055 [Arthroderma benhamiae CBS 112371] gi|291180749|gb|EFE36533.1| hypothetical protein ARB_04055 [Arthroderma benhamiae CBS 112371] Length = 1405 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + D +G ++ ++ +L N +D + Sbjct: 831 KLYKQLVTHNKLAVSDGKGGKTPVRGLSNMLMQLRKLCNHPFVFDSVEEELNPGKATNDL 890 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K + +++ + + ++ Sbjct: 891 IWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFMRFRGMKYLRLDGATKSDD 950 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +NE + G GLNLQ + ++ + W+ + + Sbjct: 951 RSDLLRRFNEPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 1004 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 1005 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1049 >gi|85083489|ref|XP_957128.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Neurospora crassa OR74A] gi|28918214|gb|EAA27892.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Neurospora crassa OR74A] Length = 1455 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 82/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 + Y + Q+ L D +G A ++ ++ +L N +DE ++ + Sbjct: 766 RLYKQMVTHQKILVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPTNTSNDL 825 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ ++ K +++ + + + ++ Sbjct: 826 LWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDFLRFRGIQYLRLDGTTKAED 885 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N P + G GLNLQ + ++ + W+ + + Sbjct: 886 RSELLRLFNAPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 939 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ +++E +L+R R K + ++ A + Sbjct: 940 RAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGKVIQAGR 984 >gi|302803789|ref|XP_002983647.1| hypothetical protein SELMODRAFT_155996 [Selaginella moellendorffii] gi|300148484|gb|EFJ15143.1| hypothetical protein SELMODRAFT_155996 [Selaginella moellendorffii] Length = 1296 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 75/225 (33%), Gaps = 28/225 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK------ 55 + Y + Y L + + ++ +L E E + + Sbjct: 534 ELYKEILTRNYEALSKRGGPQVSLNNVVMELRKLCGHPYMVIEPDSKNEEEENRHRIESS 593 Query: 56 ----IKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTI 101 + ++ KA+ +++ F L + T + I Sbjct: 594 GKLSLLDKMMVKLKASGHRVLLYSQFQHMLDILEDYLTHKNWSYERIDGNVTGAERQIRI 653 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + G G+NL + +V + W+ + + R + Sbjct: 654 DRFNAPNSNRFCFLLSTRAGGLGINL-ATADTVVIYDSDWNP-----HADLQAMARAHRL 707 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G K V +Y L+ + +I+E ++Q + K ++ L++ +K + ++ Sbjct: 708 GQKNMVMIYRLVTRGSIEERMMQMTKKKMVLEHLVVGRMKTQVLN 752 >gi|145253731|ref|XP_001398378.1| DNA helicase ino80 [Aspergillus niger CBS 513.88] gi|206558118|sp|A2R9H9|INO80_ASPNC RecName: Full=Putative DNA helicase ino80 gi|134083950|emb|CAK43045.1| unnamed protein product [Aspergillus niger] Length = 1697 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 58/157 (36%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1404 DSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1463 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1464 TVADFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1517 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1518 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVI 1554 >gi|291233864|ref|XP_002736872.1| PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 6-like [Saccoglossus kowalevskii] Length = 1503 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 62/209 (29%), Gaps = 37/209 (17%) Query: 24 NSASKTVKCLQLANGAVYY------------------DEEKHWKEVHDEKIKALEVII-- 63 + + ++ N +E ++ K+ +E ++ Sbjct: 818 KVFAGLITLRKICNHPDISTGGPRVLKGDYEHDDDIPEEMRYGYWKKSGKLIVIESLLKL 877 Query: 64 EKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 K +++ L L + + +N + + + Sbjct: 878 WKKQGHRVLLFTQSKQMLDILDSFVTSRGYNYMRMDGSTPISSRQPAVNRFNQDKSVFVF 937 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G G+NL G + +V + W+ R + G + V +Y L+ Sbjct: 938 LLTTRVGGLGVNL-IGADRVVIYDPDWNPSTDM-----QARERAWRIGQNKQVTIYRLLT 991 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 TI+E + R K + + +L K+ Sbjct: 992 SGTIEEKIYHRQIFKQFLTNRVLKDPKQR 1020 >gi|261334500|emb|CBH17494.1| DNA repair and recombination protein RAD54,putative [Trypanosoma brucei gambiense DAL972] Length = 1037 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 70/232 (30%), Gaps = 49/232 (21%) Query: 8 QRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDE---------EKHWKEVHDEKIK 57 QRE Y + +L N + E + + + Sbjct: 626 QREAYEKISAIVESSQCTPLVLISSLRKLCNHMDLFHEAVVSSNGDQKGKGGGIPKSVLP 685 Query: 58 ---------------------ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------ 90 L+ + + +++ +F L + Sbjct: 686 KGYKVGTLSQEVGSKMQFVSLMLDELCSNGDHDKLVIVSNFTQTLDVIAAMCKTKKISFF 745 Query: 91 ----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + + +N + + G GLNL G N L+ F W+ Sbjct: 746 QLDGSMPIKRRQEVVDRFNVPNSQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPAN- 803 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ VF+Y L++ +I+E + QR +K + +++ Sbjct: 804 ----DAQAMGRVWRDGQKKRVFIYRLLSTGSIEEKIYQRQVSKQGLSANVVD 851 >gi|71755407|ref|XP_828618.1| DNA repair/recombination protein RAD54 [Trypanosoma brucei TREU927] gi|70834004|gb|EAN79506.1| DNA repair and recombination protein RAD54, putative [Trypanosoma brucei] Length = 1037 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 70/232 (30%), Gaps = 49/232 (21%) Query: 8 QRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDE---------EKHWKEVHDEKIK 57 QRE Y + +L N + E + + + Sbjct: 626 QREAYEKISAIVESSQCTPLVLISSLRKLCNHMDLFHEAVVSSNGDQKGKGGGIPKSVLP 685 Query: 58 ---------------------ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------ 90 L+ + + +++ +F L + Sbjct: 686 KGYKVGTLSQEVGSKMQFVSLMLDELCSNGDHDKLVIVSNFTQTLDVIAAMCKTKKISFF 745 Query: 91 ----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + + +N + + G GLNL G N L+ F W+ Sbjct: 746 QLDGSMPIKRRQEVVDRFNVPNSQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPAN- 803 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ VF+Y L++ +I+E + QR +K + +++ Sbjct: 804 ----DAQAMGRVWRDGQKKRVFIYRLLSTGSIEEKIYQRQVSKQGLSANVVD 851 >gi|159126257|gb|EDP51373.1| SNF2 family helicase/ATPase (Ino80), putative [Aspergillus fumigatus A1163] Length = 1708 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1416 DSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1475 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1476 TVADFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1529 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1530 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1568 >gi|70998570|ref|XP_754007.1| SNF2 family helicase/ATPase (Ino80) [Aspergillus fumigatus Af293] gi|74672951|sp|Q4WTV7|INO80_ASPFU RecName: Full=Putative DNA helicase ino80 gi|66851643|gb|EAL91969.1| SNF2 family helicase/ATPase (Ino80), putative [Aspergillus fumigatus Af293] Length = 1708 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1416 DSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1475 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1476 TVADFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1529 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1530 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1568 >gi|119499890|ref|XP_001266702.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] gi|119414867|gb|EAW24805.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] Length = 1141 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 77/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 457 VKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 516 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 517 VYNSGKMVILDKLLARMQQQGSRVLIFSQMSRVLDILEDYCVFRDYKYCRIDGTTAHEDR 576 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + + + R Sbjct: 577 IAAIDEYNKPGSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDR 630 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 631 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 676 >gi|324502629|gb|ADY41155.1| DNA excision repair protein ERCC-6 [Ascaris suum] Length = 1156 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 65/207 (31%), Gaps = 34/207 (16%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI-----------------IEK 65 ++ + +L N + ++ + + K Sbjct: 552 MDAFVGLITLRKLCNHPDLVTGGPNKHNEYNVTLDEEMDFGAASRSGKMIVLKALLKLWK 611 Query: 66 ANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +++ L L+K + ++++N I L Sbjct: 612 DQNQKVLLFSQSRQMLTLLEKFVIKEGYEYLRMDGSTPIGSRQPLVEKFNTNEDIFLFLL 671 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G G+NL G N +V F W+ + R + G +RAV VY L+ Sbjct: 672 TTKVGGLGVNLT-GANRVVIFDPDWNPST-----DVQARERAWRIGQERAVTVYRLLTSG 725 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 TI+E + QR K + + +L K+ Sbjct: 726 TIEEKIYQRQIFKQFLANRVLVDPKQR 752 >gi|198433296|ref|XP_002124821.1| PREDICTED: similar to chromodomain helicase DNA binding protein 7 [Ciona intestinalis] Length = 4218 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 27/237 (11%), Positives = 70/237 (29%), Gaps = 39/237 (16%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYD--EEKHWKEV------ 51 K Y + L N + ++ + N E+K +E Sbjct: 1831 KYYRAILERNFEFLAKGTTGGNVPNLMNTMMELRKCCNHPYLIKGAEDKIMQEHRVMSNE 1890 Query: 52 ---------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR----------LQKAFPQ 90 K+ ++ ++ K +++ L + Sbjct: 1891 QNPLQAMIQSSGKLVLIDKLLPRLKQGGHKVLIFSQMVRVLDILEDYLVQRSYFYERIDG 1950 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ I ++ + + G G+NL + ++ F W+ + Sbjct: 1951 CIRGNERQMAIDRFSRKGSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN----- 2004 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G ++ V +Y LI +N+ + + + K + +L ++ + Sbjct: 2005 DLQAQARCHRIGQQKPVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSISGRQDQI 2061 >gi|302658563|ref|XP_003020983.1| hypothetical protein TRV_04848 [Trichophyton verrucosum HKI 0517] gi|291184858|gb|EFE40365.1| hypothetical protein TRV_04848 [Trichophyton verrucosum HKI 0517] Length = 1362 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + D +G ++ ++ +L N +D + Sbjct: 788 KLYKQLVTHNKLAVSDGKGGKTPVRGLSNMLMQLRKLCNHPFVFDSVEEELNPGKATNDL 847 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K + +++ + + ++ Sbjct: 848 IWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFMRFRGMKYLRLDGATKSDD 907 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +NE + G GLNLQ + ++ + W+ + + Sbjct: 908 RSDLLRRFNEPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 961 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 962 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1006 >gi|84998236|ref|XP_953839.1| SWI/SNF family trascriptional activator protein [Theileria annulata] gi|65304836|emb|CAI73161.1| SWI/SNF family trascriptional activator protein, putative [Theileria annulata] Length = 1012 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 32/233 (13%), Positives = 84/233 (36%), Gaps = 35/233 (15%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNS--ASKTVKCLQLANGAVYY--------DEEKHWK 49 + Y R+ +L + + ++ + N + D Sbjct: 429 QLYRDLLRKNVPELGVDDNTKSGIHVQLLNLAMQLRKACNHPYLFEGYEDRNEDPFGEHV 488 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ ++ +I + N++ I++ L L+ + + Sbjct: 489 VQNSGKLSLVDKLIPRLLGNSSRILIFSQMARMLDILEDYCRMRNYLYFRIDGNTSSEDR 548 Query: 98 PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N + + + + G G+NL ++++ + W+ + ++ + R Sbjct: 549 DYQISSFNQPDSMVNIFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAIDR 602 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK---KETIHV 205 + G + V+VY L+ Q TI+E +++R K + ++ + KE + + Sbjct: 603 AHRIGQLKPVYVYRLVHQYTIEEKIIERATMKLQLDTAVIQHGRLAQKELLQM 655 >gi|117606190|ref|NP_001071054.1| chromodomain-helicase-DNA-binding protein 7 [Gallus gallus] gi|123883232|sp|Q06A37|CHD7_CHICK RecName: Full=Chromodomain-helicase-DNA-binding protein 7; Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7 gi|115394059|gb|ABI96999.1| chromodomain helicase DNA-binding protein 7 [Gallus gallus] Length = 3011 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 74/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1217 KYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1276 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1277 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1336 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I ++ + + G G+NL + + F W+ + Sbjct: 1337 IDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1393 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1394 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1446 >gi|115438288|ref|XP_001218028.1| hypothetical protein ATEG_09406 [Aspergillus terreus NIH2624] gi|121733988|sp|Q0CA78|INO80_ASPTN RecName: Full=Putative DNA helicase ino80 gi|114188843|gb|EAU30543.1| hypothetical protein ATEG_09406 [Aspergillus terreus NIH2624] Length = 1690 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 58/157 (36%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1397 DSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1456 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1457 TVADFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1510 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1511 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVI 1547 >gi|297484148|ref|XP_002694217.1| PREDICTED: chromodomain helicase DNA binding protein 5 [Bos taurus] gi|296479122|gb|DAA21237.1| chromodomain helicase DNA binding protein 5 [Bos taurus] Length = 2099 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 1046 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 1105 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1106 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1165 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1166 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1219 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1220 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1261 >gi|168206269|ref|ZP_02632274.1| putative helicase [Clostridium perfringens E str. JGS1987] gi|170662244|gb|EDT14927.1| putative helicase [Clostridium perfringens E str. JGS1987] Length = 1067 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 69/195 (35%), Gaps = 22/195 (11%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 + + N + K ++ + + K+ ++ I++ + I++ Sbjct: 861 EKSGRDKINLFAYLTKLREICLDPSLVVPDYTGE---SSKLTVVKEIVKDASESGKKILL 917 Query: 74 AYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 F S L G ++ +N + I + + G G Sbjct: 918 FSQFTSVLKKIEEDFKKEDISYLYLDGGTYAKDRVEIVKNFNEDSNIKVFLISLKAGGVG 977 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL ++++ F WW+ +E R + G + V V L+A++TI+E ++ Sbjct: 978 LNLTS-ASVVIHFDPWWNPA-----VEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVL 1031 Query: 183 RLRTKSTIQDLLLNA 197 K + L++ Sbjct: 1032 MQEDKRELIQSLMDG 1046 >gi|159110197|ref|XP_001705360.1| Chromodomain helicase-DNA-binding protein, putative [Giardia lamblia ATCC 50803] gi|157433443|gb|EDO77686.1| Chromodomain helicase-DNA-binding protein, putative [Giardia lamblia ATCC 50803] Length = 2645 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 78/219 (35%), Gaps = 27/219 (12%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW------KEVHDEKIKALE 60 + Y L ++ + + ++ ++ N + K K + L+ Sbjct: 1536 LLEQNYEMLTAKSYNSVKLQNLLMQLRKVCNHPYIIHDLKLHTANLKDIVDGSGKFQVLD 1595 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK 108 +++K N +++ L L++ T ++ I +NE Sbjct: 1596 KLLDKLNSEGHRVLIFSQLIKTLDILERYCFYKKYKFQRLQGSMTSEQRRRAINNFNEKN 1655 Query: 109 IP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + S G G+NL + ++ F ++ + R + G + V Sbjct: 1656 SKDFIFLLSTRSGGQGINL-ATADTVIIFDADYNP-----HNDLQAAGRVHRIGQSKPVT 1709 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +Y L+ +++++E +L K + ++ K E+I++ Sbjct: 1710 IYRLVTRDSVEERILDIGHRKLMLDYAIIQK-KNESINL 1747 >gi|322382458|ref|ZP_08056353.1| ATP-binding SNF2 helicase-like protein/protein kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153571|gb|EFX45960.1| ATP-binding SNF2 helicase-like protein/protein kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 463 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 70/182 (38%), Positives = 102/182 (56%), Gaps = 10/182 (5%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 + K LQ+A+GAVY +E KE+H+ K+ ALE I+E + P++V Y++ L R+Q+ Sbjct: 280 LSNKLLQMASGAVYDEERGV-KEIHEAKLDALEDILEASQGKPVMVFYNYKHSLQRVQQR 338 Query: 88 FPQGRTLDKDP---CTIQEWNEGKIPLLFAHPASCGHGLNLQ-YGGNILVFFSLWWDLEE 143 FPQ R L K I +WN KIPLL HP S GHGLNLQ +++F W LEE Sbjct: 339 FPQARILRKGKEGVQDITDWNTNKIPLLLLHPKSAGHGLNLQESNCQTVIWFDQIWSLEE 398 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 Q R + G R + V L+A+ T+DE V++ + K+T Q+ L+ A+K Sbjct: 399 FQ-----QANARVYRQGQTRKIVVMQLVAEGTMDEEVVEAIDKKATGQEELMQAVKARIE 453 Query: 204 HV 205 + Sbjct: 454 RI 455 >gi|328783971|ref|XP_001120586.2| PREDICTED: DNA excision repair protein ERCC-6-like [Apis mellifera] Length = 1134 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 67/239 (28%), Gaps = 43/239 (17%) Query: 2 KQYHKFQREL-YCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKE---- 50 K Y K+ R + E N ++ N Y Sbjct: 587 KLYKKYLRSTDVSFILHEKNNIENGKYRARLLIALSALRKICNHPDLYLYTTPIDSDEDI 646 Query: 51 -------------VHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQ 85 H K+ + ++ K +++ + Sbjct: 647 DISDETLEKFGYWKHSGKMIVVRSLLKIWKKQGHRVLLFTQGRQMMHILESLIQNEQYTY 706 Query: 86 KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + TI+ +N + + G G+NL G N +V + W+ Sbjct: 707 LRMDGTTPMSHRQETIRSFNKDSSYFIFLLTTRVGGLGVNLT-GANRVVIYDPDWNPAT- 764 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R + G + V +Y LI TI+E + R K + + +L ++ + Sbjct: 765 ----DAQARERAWRIGQNKNVTIYRLITAGTIEEKIYHRQIFKILLSNKVLEDPRQRRL 819 >gi|327356382|gb|EGE85239.1| RSC complex subunit [Ajellomyces dermatitidis ATCC 18188] Length = 1487 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 75/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + D +G ++ ++ +L N ++ + Sbjct: 844 KLYKQLATHNKLVVSDGKGGKTGVRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 903 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K + +++ + + ++ D Sbjct: 904 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 963 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 964 RSDLLKEFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 1017 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+ + K + ++ A K Sbjct: 1018 RAHRIGQKNEVRILRLITSNSVEERILEAAQFKLDMDGKVIQAGK 1062 >gi|301754870|ref|XP_002913258.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Ailuropoda melanoleuca] gi|281338216|gb|EFB13800.1| hypothetical protein PANDA_001057 [Ailuropoda melanoleuca] Length = 1561 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1088 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1147 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1148 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1206 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1207 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1256 Score = 35.1 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 13/134 (9%), Positives = 35/134 (26%), Gaps = 3/134 (2%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVII 63 + Q + + ++ ++ N ++ ++ W H K + I Sbjct: 789 EDLLQSSMGSTQQAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQISKFI 848 Query: 64 EKANAAPIIVAY--HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + + + L ++L +E + + PA + Sbjct: 849 YRHGQIRVFNHSRDRWLRVLLSPFAPDYIQQSLFHRKGVNEESCFSFLRFIDVSPAEMAN 908 Query: 122 GLNLQYGGNILVFF 135 + L F Sbjct: 909 LMLQGLLARWLALF 922 >gi|156086702|ref|XP_001610760.1| SNF2 helicase [Babesia bovis T2Bo] gi|154798013|gb|EDO07192.1| SNF2 helicase, putative [Babesia bovis] Length = 894 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 83/233 (35%), Gaps = 35/233 (15%) Query: 2 KQYHKFQRELYCDLQGEN----IEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 + Y R DL E+ + + ++ + N + D Sbjct: 337 RLYKDLLRRTVPDLGAEDSHSSVVKVQLLNLAMQLRKACNHPYLFEGWEDRDADPFGEHL 396 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ ++ ++ + + I++ L L+ + ++ Sbjct: 397 VENAGKLNVVDKLLRRLLKANSRILIFSQMARMLDILEDYCRMRGYSYFRIDGNTSGEER 456 Query: 98 PCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N+ + + G G+NL ++++ + W+ + ++ + R Sbjct: 457 DDQISSFNDPNSEVSIFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAIDR 510 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK---KETIHV 205 + G + V VY L+ + TI+E +++R K + ++ + + KE + + Sbjct: 511 AHRIGQSKTVHVYRLVHEYTIEEKIIERATIKLQLDSAVIQSGRMGQKELLEM 563 >gi|19704495|ref|NP_604057.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714769|gb|AAL95356.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 1089 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 69/214 (32%), Gaps = 24/214 (11%) Query: 2 KQYHK--FQ-RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + E N + K Q+ E+ KI A Sbjct: 868 KLYQANLIKINETLAQNIDVNTNKIEVLAMLTKLRQICIDPRLLYED---VSSSSSKINA 924 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNE 106 +IEK N I++ F + L K ++ + Sbjct: 925 CIELIEKSIENNQKILLFSSFTTVLDLVAQECDNLSIPYFMLTGETNKVKRKEMVENFQN 984 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +PL + G GLNL ++++ WW++ R + G + V Sbjct: 985 EAVPLFLISLKAGGTGLNLTK-ASVVIHLDPWWNISAQ-----NQATDRAHRIGQEDTVQ 1038 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V+ LI +NTI+E +L K + D+ + K Sbjct: 1039 VFNLITKNTIEEKILNLQSKKKELSDIFVENSKG 1072 >gi|170940256|emb|CAP65483.1| unnamed protein product [Podospora anserina S mat+] Length = 866 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 73/207 (35%), Gaps = 22/207 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDEKIKALEVI 62 +F+R +L I + ++ + N Y E K+ L+ + Sbjct: 578 DEFERARTLELAKREISLKKLGNPVMQLRLVCNSPHHFYDCEADESIVTASGKMLLLDRL 637 Query: 63 IEK--ANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWN-EGK 108 + +++ FN L + I+++N + + Sbjct: 638 LPALFERGHKVLIFSQFNKQLDLLESYCADLRGWPVCRIDGSVAQEDRQAQIEDFNKDPE 697 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G G+NL + ++ F W+ ++ + R + G R V VY Sbjct: 698 LKIFLLTTRAGGQGINL-ASADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTRPVVVY 751 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 L ++T+++ +L K ++ L++ Sbjct: 752 RLATKDTVEDELLGSADAKRRLEKLVI 778 >gi|326917666|ref|XP_003205117.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 7-like [Meleagris gallopavo] Length = 3011 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 74/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1217 KYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1276 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1277 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1336 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I ++ + + G G+NL + + F W+ + Sbjct: 1337 IDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1393 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1394 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1446 >gi|73999781|ref|XP_849183.1| PREDICTED: similar to yeast INO80-like protein isoform 3 [Canis familiaris] Length = 1560 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1087 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1146 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1147 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1205 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1206 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1255 Score = 35.1 bits (79), Expect = 5.9, Method: Composition-based stats. Identities = 13/134 (9%), Positives = 34/134 (25%), Gaps = 3/134 (2%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVII 63 + Q + + ++ ++ N ++ ++ W H K + I Sbjct: 788 EDLLQSSMGSTQQAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQISKFI 847 Query: 64 EKANAAPIIVAY--HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + + + L +L +E + + PA + Sbjct: 848 YRHGQIRVFNHSRDRWLRVLLSPFAPDYIQESLFHRKGVNEESCFSFLRFIDVSPAEMAN 907 Query: 122 GLNLQYGGNILVFF 135 + L F Sbjct: 908 LMLQGLLARWLALF 921 >gi|237795092|ref|YP_002862644.1| helicase, SNF2/RAD54 family [Clostridium botulinum Ba4 str. 657] gi|229260925|gb|ACQ51958.1| helicase, SNF2/RAD54 family [Clostridium botulinum Ba4 str. 657] Length = 1077 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 79/213 (37%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++E Y +++ + S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIREKGFNKSKIKILSIITRLRQICCDPSTFIENY---EGSNGK 907 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 + L I++ I++ F S L D +++ Sbjct: 908 TETLLDIVDSSINAGHKILLFSQFTSVLKNIAEVFKINNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ +E R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQASDRAHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|268566403|ref|XP_002639713.1| C. briggsae CBR-RAD-54 protein [Caenorhabditis briggsae] Length = 782 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 80/237 (33%), Gaps = 47/237 (19%) Query: 3 QYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------------- 44 Y+K +++ + + A ++ S +L N E Sbjct: 437 LYNKLIECEKQNRITEKDKGATA-SALSFITHLKKLCNHPYLVYEELQKPDNRFRTKCLS 495 Query: 45 -------EKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAF------ 88 K + K+K L+ I+ K ++ ++ + + Sbjct: 496 VFPEAFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMALCKLRGYD 555 Query: 89 ----PQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 ++ + + +N+ I + G GLNL G N LV F W+ Sbjct: 556 FVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNL-IGANRLVMFDPDWNPA 614 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + R + G K+ F+Y L+A +I+E + QR K + +++A + Sbjct: 615 N-----DDQAMARVWRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAGE 666 >gi|307191137|gb|EFN74835.1| DNA excision repair protein ERCC-6 [Camponotus floridanus] Length = 983 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 30/239 (12%), Positives = 66/239 (27%), Gaps = 43/239 (17%) Query: 2 KQYHK-FQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVHD- 53 K Y K E + E ++ N + + + D Sbjct: 459 KLYKKYLCSEDVTFILHEKNNHDTGRYRARFLIALSALRKICNHPDLFLYTREFDSDEDI 518 Query: 54 ----------------EKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQ 85 K+ + ++ +++ + Sbjct: 519 TLSEEQLEKFGYWKRAGKMNVVRSLLKIWHKQQHRVLLFTQGRQMMHILESLLQREGYTY 578 Query: 86 KAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + TI +N + G G+NL G + ++ + W+ Sbjct: 579 LRMDGTTAMSQRQQTIHTFNNRPSYFVFLLTTRVGGLGVNL-IGADRVIIYDPDWNPAT- 636 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R + G + V VY LI TI+E + R K + + +L+ ++ + Sbjct: 637 ----DAQARERAWRIGQNKQVTVYRLITAGTIEEKMYHRQIFKLLLSNKVLDDPRQRRL 691 >gi|168184681|ref|ZP_02619345.1| helicase, SNF2/RAD54 family [Clostridium botulinum Bf] gi|182672230|gb|EDT84191.1| helicase, SNF2/RAD54 family [Clostridium botulinum Bf] Length = 1077 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 79/213 (37%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++E Y +++ + S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIREKGFNKSKIKILSIITRLRQICCDPSTFIENY---EGSNGK 907 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 + L I++ I++ F S L D +++ Sbjct: 908 TETLLDIVDSSINAGHKILLFSQFTSVLKNIAEVFKINNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ +E R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQASDRAHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|325179864|emb|CCA14266.1| hypothetical protein SORBIDRAFT_03g009030 [Albugo laibachii Nc14] Length = 938 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 28/192 (14%) Query: 32 CLQLANGAVYYDEEKHW--------KEVHDEKIKALEVII--EKANAAPIIVAYHFNSDL 81 L N K+ L I+ K +++ L Sbjct: 456 LRHLCNHPDLVKRAGDEASRSENFGSIEKSGKMLVLCKILAMWKDQGHRVLLFTQTRMML 515 Query: 82 ARLQKAFPQ----------GRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGG 129 L++ + + + ++N+ + I + + G G+NL G Sbjct: 516 DILERLMEHLGYNHCRLDGSTPVKERQRLLDKFNDAESGIFIFLLTTRAGGIGINL-AGA 574 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 N +V F W+ R + G + V +Y LI TI+E + R K Sbjct: 575 NRVVIFDPDWNPSTDM-----QARERSWRIGQIKQVTIYRLITSGTIEEKIYHRQIFKQY 629 Query: 190 IQDLLLNALKKE 201 + +L+ K++ Sbjct: 630 LTTKVLHDPKRK 641 >gi|295674669|ref|XP_002797880.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Paracoccidioides brasiliensis Pb01] gi|226280530|gb|EEH36096.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Paracoccidioides brasiliensis Pb01] Length = 1332 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSAS-KTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + S ++ +L N ++ + Sbjct: 691 KLYKQLVTHNKLVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 750 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K + +++ + + ++ D Sbjct: 751 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 810 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 811 RSDLLKEFNAPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 864 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R + K + ++ A K Sbjct: 865 RAHRIGQKNEVRILRLITSNSVEERILERAQFKLDMDGKVIQAGK 909 >gi|73999783|ref|XP_858164.1| PREDICTED: similar to yeast INO80-like protein isoform 4 [Canis familiaris] Length = 1584 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1111 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1170 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1171 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1229 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1230 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1279 Score = 35.1 bits (79), Expect = 6.0, Method: Composition-based stats. Identities = 13/134 (9%), Positives = 34/134 (25%), Gaps = 3/134 (2%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVII 63 + Q + + ++ ++ N ++ ++ W H K + I Sbjct: 788 EDLLQSSMGSTQQAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQISKFI 847 Query: 64 EKANAAPIIVAY--HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + + + L +L +E + + PA + Sbjct: 848 YRHGQIRVFNHSRDRWLRVLLSPFAPDYIQESLFHRKGVNEESCFSFLRFIDVSPAEMAN 907 Query: 122 GLNLQYGGNILVFF 135 + L F Sbjct: 908 LMLQGLLARWLALF 921 >gi|311244967|ref|XP_003121636.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Sus scrofa] Length = 1566 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1093 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1152 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1153 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1211 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1212 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1261 Score = 35.1 bits (79), Expect = 5.3, Method: Composition-based stats. Identities = 13/134 (9%), Positives = 35/134 (26%), Gaps = 3/134 (2%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVII 63 + Q + + ++ ++ N ++ ++ W H K + I Sbjct: 794 EDLLQSSMGSTQQAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQISKFI 853 Query: 64 EKANAAPIIVAY--HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + + + L ++L +E + + PA + Sbjct: 854 YRHGQIRVFNHSRDRWLRVLLSPFAPDYIQQSLFHRKGVNEESCFSFLRFIDVSPAEMAN 913 Query: 122 GLNLQYGGNILVFF 135 + L F Sbjct: 914 LMLQGLLARWLALF 927 >gi|134083941|emb|CAK43037.1| unnamed protein product [Aspergillus niger] Length = 1418 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + D +G ++ ++ +L N ++ + Sbjct: 798 KLYRQLVTHNKMAVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEPVEDQMNPGRGTNDL 857 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 858 IWRTAGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGLKYLRLDGSTKSDD 917 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 918 RSDLLKLFNAPDSEYFCFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQD 971 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 972 RAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1016 >gi|25144179|ref|NP_498468.2| yeast ISW (imitation SWI) homolog family member (isw-1) [Caenorhabditis elegans] gi|21264515|sp|P41877|ISW1_CAEEL RecName: Full=Chromatin-remodeling complex ATPase chain isw-1; AltName: Full=Nucleosome-remodeling factor subunit isw-1 gi|16950408|gb|AAA50636.2| Yeast isw (imitation swi) homolog protein 1 [Caenorhabditis elegans] Length = 1009 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 88/233 (37%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYYDEEK-- 46 +K Y K QRE Y + ++I+ N A K + + N +D + Sbjct: 362 VKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEPG 421 Query: 47 ------HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-------- 90 + K+ L+ ++ K + +++ F+ L L+ Sbjct: 422 PPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRL 481 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I+ +N + + G G+NL ++++ + W+ + Sbjct: 482 DGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINL-ATADVVIIYDSDWNPQS--- 537 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + R + G K+ V V+ LI +NT+DE ++++ K + ++++ + Sbjct: 538 --DLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGR 588 >gi|330944191|ref|XP_003306326.1| hypothetical protein PTT_19456 [Pyrenophora teres f. teres 0-1] gi|311316176|gb|EFQ85559.1| hypothetical protein PTT_19456 [Pyrenophora teres f. teres 0-1] Length = 1892 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 74/200 (37%), Gaps = 25/200 (12%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK----EVHDEKIKALEVIIEK--ANA 68 L+ + A + + K Q N + + K+ L+ ++++ AN Sbjct: 1264 LEAKTESA--ALTVCNKLPQPTNERTRFTHIEAPSMSRFVTDSGKLAQLDALLKELKAND 1321 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLFAHPA 117 +++ + + +++ + ++ I + Sbjct: 1322 HRVLLYFQMTRMMDLMEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQSDRSIFVFLLSTR 1381 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + ++F+ W+ I+ + R + G R V VY LI + TI+ Sbjct: 1382 AGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHRLGQTRQVTVYRLITRGTIE 1435 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E + +R K +Q ++++ Sbjct: 1436 ERIRKRALQKEEVQRVVISG 1455 >gi|291388024|ref|XP_002710542.1| PREDICTED: chromodomain helicase DNA binding protein 7 [Oryctolagus cuniculus] Length = 2997 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1216 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1275 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1276 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1335 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1336 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1392 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1393 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1445 >gi|223953572|gb|ACN30001.1| chromodomain helicase DNA-binding protein 7 [Vicugna vicugna] Length = 3000 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1212 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1271 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1272 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1331 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1332 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1388 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1389 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1441 >gi|301759851|ref|XP_002915762.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Ailuropoda melanoleuca] gi|281345480|gb|EFB21064.1| hypothetical protein PANDA_003773 [Ailuropoda melanoleuca] Length = 2995 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1214 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1273 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1274 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1333 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1334 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1390 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1391 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1443 >gi|194214886|ref|XP_001915803.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 7 (ATP-dependent helicase CHD7) (CHD-7) [Equus caballus] Length = 2995 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1215 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1274 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1275 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1334 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1335 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1391 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1392 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1444 >gi|148673732|gb|EDL05679.1| mCG20155 [Mus musculus] Length = 2985 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1206 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1265 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1266 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1325 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1326 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1382 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1383 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1435 >gi|124487249|ref|NP_001074886.1| chromodomain-helicase-DNA-binding protein 7 [Mus musculus] gi|148877247|sp|A2AJK6|CHD7_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 7; Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7 gi|123228216|emb|CAM16769.1| chromodomain helicase DNA binding protein 7 [Mus musculus] gi|123229796|emb|CAM25204.1| chromodomain helicase DNA binding protein 7 [Mus musculus] Length = 2986 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1206 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1265 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1266 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1325 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1326 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1382 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1383 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1435 >gi|73999130|ref|XP_544097.2| PREDICTED: similar to chromodomain helicase DNA binding protein 7 isoform 1 [Canis familiaris] Length = 2995 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1215 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1274 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1275 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1334 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1335 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1391 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1392 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1444 >gi|146416597|ref|XP_001484268.1| hypothetical protein PGUG_03649 [Meyerozyma guilliermondii ATCC 6260] Length = 1117 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 72/230 (31%), Gaps = 41/230 (17%) Query: 3 QYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------EEKHWKEVH 52 Y KF +L+ L+G+ N + ++ N D + Sbjct: 610 MYEKFLSSEDLHAILKGK----RNMLTGVDTLRKICNHPDLVDRELLLRKKGYNYGIPNK 665 Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARL------------------QKAFPQGR 92 K+ L+ ++ ++ ++ L L Sbjct: 666 SGKMLVLKGLLQLWQSQGHRTLLFCQTKQMLDILEKLLVNLTRISDGTEYFNYMRMDGST 725 Query: 93 TLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K + +N + G G+NL G + ++ + W+ + Sbjct: 726 PISKRQGLVDMFNNNTNYDVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DIQ 779 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G KR + +Y L+ TI+E + R K+ + + +L K+ Sbjct: 780 ARERAWRLGQKRDIVIYRLMTAGTIEEKIYHRQIFKTFLTNKILKDPKQR 829 >gi|326431158|gb|EGD76728.1| SNF2 family DNA-dependent ATPase [Salpingoeca sp. ATCC 50818] Length = 1797 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 74/218 (33%), Gaps = 42/218 (19%) Query: 18 ENIEAFNSA-SKTVKCLQLANGAVYYDEEKHWKEVH---------------------DEK 55 ++ + N + ++ +L ++E + H K Sbjct: 1061 QDASSVNKLRNMIMQLRKLCCHPFLFEEVERAYLEHAAAEMGMDKAALTNGPELWRACGK 1120 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQE 103 + L+ ++ K A ++ F S L + D ++ Sbjct: 1121 FELLDRMLPKLRAGRHRTLIFSQFTSLLTVLEDYFAAKGIKYLRMDGSTSADDRAELLRL 1180 Query: 104 WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + + G GLNLQ + ++ + W+ + + R + G Sbjct: 1181 FNAPDSEYEIFILSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQDRAHRIGQ 1234 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R V V+ L+ N+++E +L+R + K + ++ A K Sbjct: 1235 TREVRVFRLVTVNSVEERILERAKYKLDVDQKVIQAGK 1272 >gi|257467968|ref|ZP_05632064.1| SNF2-related protein [Fusobacterium ulcerans ATCC 49185] gi|317062254|ref|ZP_07926739.1| helicase [Fusobacterium ulcerans ATCC 49185] gi|313687930|gb|EFS24765.1| helicase [Fusobacterium ulcerans ATCC 49185] Length = 1030 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 77/204 (37%), Gaps = 17/204 (8%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + ++ ++ E + + QL N + E+ K + + Sbjct: 815 KLYLAYLKKYKREIASEK-NSLKIFLYITRLRQLCNHPQLFLEDYSGKS-SKLEALLELL 872 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL---------DKDPCTIQEWNEGKIPLL 112 K+ ++V F L ++K P+ T + ++ +N G + Sbjct: 873 EECKSGGHRVLVFSQFTEMLEIIKKNMPENMTYLYLDGKTKAKERIELVENFNSGNEDVF 932 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLN+ G + ++ F WW+ +E R + G K+ V V+ ++A Sbjct: 933 IISLKAGGSGLNIT-GADTVIHFDPWWN-----SSVEDQATARAYRLGQKKNVNVFKMVA 986 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 + TI+E + K + +L+ Sbjct: 987 KGTIEEKINTIKEGKEELIREILD 1010 >gi|261198361|ref|XP_002625582.1| RSC complex subunit [Ajellomyces dermatitidis SLH14081] gi|239594734|gb|EEQ77315.1| RSC complex subunit [Ajellomyces dermatitidis SLH14081] Length = 1468 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 75/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + D +G ++ ++ +L N ++ + Sbjct: 825 KLYKQLATHNKLVVSDGKGGKTGVRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 884 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K + +++ + + ++ D Sbjct: 885 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 944 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 945 RSDLLKEFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 998 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+ + K + ++ A K Sbjct: 999 RAHRIGQKNEVRILRLITSNSVEERILEAAQFKLDMDGKVIQAGK 1043 >gi|317036939|ref|XP_001398370.2| chromatin structure-remodeling complex subunit snf2 [Aspergillus niger CBS 513.88] Length = 1422 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + D +G ++ ++ +L N ++ + Sbjct: 802 KLYRQLVTHNKMAVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEPVEDQMNPGRGTNDL 861 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 862 IWRTAGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGLKYLRLDGSTKSDD 921 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 922 RSDLLKLFNAPDSEYFCFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQD 975 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 976 RAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1020 >gi|268579039|ref|XP_002644502.1| Hypothetical protein CBG14390 [Caenorhabditis briggsae] gi|187027870|emb|CAP32941.1| hypothetical protein CBG_14390 [Caenorhabditis briggsae AF16] Length = 2938 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 76/222 (34%), Gaps = 37/222 (16%) Query: 7 FQRELYCDLQGENIEAFNSASKTV-KCLQLANGAVYYDEEKHWKEVH------------- 52 Q+ L L G+ S T+ +L N ++ + + Sbjct: 1888 MQKGLL--LDGKTNTGSRSLMNTMVHLRKLCNHPFLFENVEDSCKSFWKSQFISAKDLYR 1945 Query: 53 -DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPC 99 K++ L+ I+ K +++ + + + ++ G + Sbjct: 1946 VSGKLELLDRILPKLQASGHRVLMFFQMTAMMTIVEDYLAGGNIQYLRLDGSTKTDERGA 2005 Query: 100 TIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++N + G GLNLQ + ++ F W+ + R Sbjct: 2006 LLDKFNAPNSEYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQDRAH 2059 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V V+ LI N+++E +L R K + + ++ A K Sbjct: 2060 RIGQKAEVRVFRLITANSVEEKILASARFKLNVDEKVIQAGK 2101 >gi|302833439|ref|XP_002948283.1| hypothetical protein VOLCADRAFT_80059 [Volvox carteri f. nagariensis] gi|300266503|gb|EFJ50690.1| hypothetical protein VOLCADRAFT_80059 [Volvox carteri f. nagariensis] Length = 1091 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 79/223 (35%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 Q++ Y L ++I+A N + ++ + N + Sbjct: 410 DMQKKWYAALLQKDIDALNGGADRAKLLNVVMQLRKCCNHPYLFQGAEPGPPFITGEHLI 469 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ + + +++ + L+ Sbjct: 470 ENSGKLVLLDKLLPRLKERDSRVLIFSQMTRMIDILEDYCLYRGYGYCRIDGNTGGDDRD 529 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+N+ + + G G+NL +I+V + W+ + ++ + R Sbjct: 530 NMIDEFNKPNSSKFIFLLSTRAGGLGINL-ATADIVVLYDSDWNPQ-----MDLQAMDRA 583 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ +N+I+E V+++ K + L++ + Sbjct: 584 HRIGQKKEVQVFRFCIENSIEEKVIEKAYKKLRLDALVIQQGR 626 >gi|294657478|ref|XP_459783.2| DEHA2E10934p [Debaryomyces hansenii CBS767] gi|199432721|emb|CAG88022.2| DEHA2E10934p [Debaryomyces hansenii] Length = 1157 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 75/234 (32%), Gaps = 45/234 (19%) Query: 3 QYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------EEKHWKEVH 52 Y KF +L+ L+G+ N ++ N D + Sbjct: 650 LYEKFLSSEDLHAILKGK----RNILMGVDILRKICNHPDLVDREILQRRKNYNYGNPAK 705 Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------------------F 88 K++ L+ ++ + ++ L L+K Sbjct: 706 SGKLQVLKNLLQLWQMQGHRTLLFCQTKQMLDILEKFVTNLPSLNENGEEVRGTFNYLRM 765 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + + + +N + + + G G+NL G + ++ + W+ Sbjct: 766 DGSTNIGRRQALVDTFNEDKQYHVFLLTTKVGGLGINLT-GADRVIIYDPDWNPST---- 820 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G K+ + +Y L+ +I+E + R K+ + + +L K+ Sbjct: 821 -DIQARERAWRLGQKKDITIYRLMTAGSIEEKIYHRQIFKTFLTNKILKDPKQR 873 >gi|295674629|ref|XP_002797860.1| DNA ATP-dependent helicase [Paracoccidioides brasiliensis Pb01] gi|226280510|gb|EEH36076.1| DNA ATP-dependent helicase [Paracoccidioides brasiliensis Pb01] Length = 1614 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 59/157 (37%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1312 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1371 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1372 TVLDFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1425 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1426 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVI 1462 >gi|212535682|ref|XP_002147997.1| SNF2 family helicase/ATPase (Ino80), putative [Penicillium marneffei ATCC 18224] gi|210070396|gb|EEA24486.1| SNF2 family helicase/ATPase (Ino80), putative [Penicillium marneffei ATCC 18224] Length = 2500 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 2213 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 2272 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 2273 TVADFQHRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 2326 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 2327 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 2365 >gi|320164602|gb|EFW41501.1| SNF2 family DNA-dependent ATPase [Capsaspora owczarzaki ATCC 30864] Length = 2139 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 73/221 (33%), Gaps = 38/221 (17%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------------- 54 + + Q + + N ++ + N + + Sbjct: 861 KSSMVVQPQQQRVTLMNIL---MELRKCTNHPYLFPGAEPEFAGDSAEVADMQAQSLVQA 917 Query: 55 --KIKALEVIIE--KANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCT 100 K+ L+ ++ +A +++ S L Sbjct: 918 SGKLVLLDKMLPGLRARGHRVLIFSQMTRVLDILEDYLSHLQMPFCRLDGSTLNTDRQHL 977 Query: 101 IQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++N P+ + G G+NL + ++ F ++ + ++R + Sbjct: 978 IDKFNAPNSPIFCFLLSTRAGGLGINLHT-ADTIIMFDSDFNP-----HSDMQALSRAHR 1031 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V VY L+ +TI+E +LQR R K + +++ L+ Sbjct: 1032 IGQKKPVTVYRLVTSDTIEEGILQRARKKLLLGHVVVEKLE 1072 >gi|297791319|ref|XP_002863544.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp. lyrata] gi|297309379|gb|EFH39803.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp. lyrata] Length = 2251 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 77/222 (34%), Gaps = 33/222 (14%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHDEK 55 + Y + Y L+ G+ + + + ++ ++ N E + +HD + Sbjct: 943 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLHDMR 1002 Query: 56 --------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLD 95 + + + + +++ L L+ + Sbjct: 1003 IKASAKLTLLHSMLKVLQKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVA 1062 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ K + +CG G+NL + ++ + ++ + + Sbjct: 1063 DRQAAIARFNQDKNRFVFLLSTRACGLGINL-ATADTVIIYDSDFNP-----HADIQAMN 1116 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1117 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1158 >gi|154316737|ref|XP_001557689.1| hypothetical protein BC1G_03786 [Botryotinia fuckeliana B05.10] gi|150845398|gb|EDN20591.1| hypothetical protein BC1G_03786 [Botryotinia fuckeliana B05.10] Length = 1130 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 76/224 (33%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + G+ + ++ + N + Sbjct: 426 VKWYKKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 485 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ K + +++ + L L+ G + Sbjct: 486 VFNAGKMVMLDKLLTRMKKAGSRVLIFSQMSRLLDILEDYCVFREYKYCRIDGGTAHEDR 545 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N+ + + G G+NL +I+V + W+ + + + R Sbjct: 546 IQAIDDYNKPDSEKFVFLLTTRAGGLGINLTS-ADIVVLYDSDWNPQA-----DLQAMDR 599 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY + +N I+E VL+R K + L++ + Sbjct: 600 AHRIGQTKQVVVYRFVTENAIEEKVLERAAQKLRLDQLVIQQGR 643 >gi|194386250|dbj|BAG59689.1| unnamed protein product [Homo sapiens] Length = 567 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 81/234 (34%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L + + S +L N ++ +E Sbjct: 242 ELYKRFLRQAKPAEELLEGKMS-VSPLSSITSLKKLCNHPALIYDKCVEEEDGFVGALDL 300 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 301 FPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY 360 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 361 VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 419 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 420 -----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 468 >gi|149604225|ref|XP_001512827.1| PREDICTED: similar to chromatin remodeling factor CHROM1 isoform 1 [Ornithorhynchus anatinus] Length = 2885 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 72/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEE-----KHWKEVHD- 53 K Y + + L N + ++ + N ++E H Sbjct: 1108 KYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETHSP 1167 Query: 54 --------------EKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 TAPDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + R K + +L ++ Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGR 1337 >gi|326479975|gb|EGE03985.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Trichophyton equinum CBS 127.97] Length = 1352 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + D +G ++ ++ +L N +D + Sbjct: 778 KLYKQLVTHNKLAVSDGKGGKTPVRGLSNMLMQLRKLCNHPFVFDSVEEELNPGKATNDL 837 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K + +++ + + ++ Sbjct: 838 IWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFLRFRGMKYLRLDGATKSDD 897 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +NE + + G GLNLQ + ++ + W+ + + Sbjct: 898 RSDLLRRFNEPESEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 951 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 952 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 996 >gi|332007781|gb|AED95164.1| chromatin remodeling 4 protein [Arabidopsis thaliana] Length = 2223 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 76/222 (34%), Gaps = 33/222 (14%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHDEK 55 + Y + Y L+ G+ + + + ++ ++ N E + +HD + Sbjct: 940 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLHDMR 999 Query: 56 --------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLD 95 + + + +++ L L+ + Sbjct: 1000 IKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVA 1059 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ K + +CG G+NL + ++ + ++ + + Sbjct: 1060 DRQAAIARFNQDKNRFVFLLSTRACGLGINL-ATADTVIIYDSDFNP-----HADIQAMN 1113 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1114 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1155 >gi|322805986|emb|CBZ03553.1| swf/SNF family helicase [Clostridium botulinum H04402 065] Length = 1077 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++E Y +++ S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIENY---EGSNGK 907 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 + L I+ I++ F S L D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNIKYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ +E R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQASDRAHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|320166021|gb|EFW42920.1| Ercc6 protein [Capsaspora owczarzaki ATCC 30864] Length = 1576 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K+ ++ ++ A +++ L +++ + Sbjct: 1038 SGKLVVIDSLLRMWHAQGHRVLLFAQTRQTLDIIERWVRSTAYRYRRMDGTTPIRSRQQM 1097 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E+N + L G G+NL G + +V F W+ + R + Sbjct: 1098 VDEFNTNESLFLFLLTTKVGGLGVNLT-GADRVVIFDPDWNPST-----DTQARERAWRI 1151 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V VY L+ TI+E + R K + + +L+ ++ Sbjct: 1152 GQKRQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLSDPRQR 1193 >gi|317138661|ref|XP_001817058.2| DNA helicase ino80 [Aspergillus oryzae RIB40] Length = 1690 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1397 DSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1456 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1457 TVADFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1510 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1511 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1549 >gi|170111204|ref|XP_001886806.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164638164|gb|EDR02443.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 928 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 75/212 (35%), Gaps = 34/212 (16%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVIIEK--A 66 + + ++ ++ + +D + K+ L+ ++ + Sbjct: 609 KVNNMKLQNAVMQLRKVCSHPFLFDWPVDPDTMMPILGEELVNASGKMMVLDRLLRELFR 668 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCTIQEWNEGKIP---- 110 +++ F + L ++ +++ + N G P Sbjct: 669 RKHKVLLFSQFTTMLNIIEDWATDYMGWNICRIDGSSKPMERREAMNRFQNGGDDPDAPS 728 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL + ++F+ W+ + ++ R + G + V ++ L Sbjct: 729 LFLLSTRAGGLGINLVA-ADTVIFYDQDWNPQ-----MDAQAQDRAHRIGQTKPVLIFRL 782 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++ +TI+ ++QR K ++ L++ K + Sbjct: 783 VSAHTIETKIMQRATEKRKLEALVIAKGKFKM 814 >gi|145358870|ref|NP_199293.2| CHR4 (CHROMATIN REMODELING 4); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding / protein binding / zinc ion binding [Arabidopsis thaliana] Length = 2242 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 76/222 (34%), Gaps = 33/222 (14%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHDEK 55 + Y + Y L+ G+ + + + ++ ++ N E + +HD + Sbjct: 940 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLHDMR 999 Query: 56 --------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLD 95 + + + +++ L L+ + Sbjct: 1000 IKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVA 1059 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ K + +CG G+NL + ++ + ++ + + Sbjct: 1060 DRQAAIARFNQDKNRFVFLLSTRACGLGINL-ATADTVIIYDSDFNP-----HADIQAMN 1113 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1114 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1155 >gi|119498509|ref|XP_001266012.1| SNF2 family helicase/ATPase (Ino80), putative [Neosartorya fischeri NRRL 181] gi|206558086|sp|A1CZE5|INO80_NEOFI RecName: Full=Putative DNA helicase ino80 gi|119414176|gb|EAW24115.1| SNF2 family helicase/ATPase (Ino80), putative [Neosartorya fischeri NRRL 181] Length = 1708 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1416 DSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1475 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1476 TVADFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1529 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1530 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1568 >gi|2660669|gb|AAC79140.1| human Mi-2 autoantigen-like protein [Arabidopsis thaliana] gi|9758384|dbj|BAB08833.1| helicase-like protein [Arabidopsis thaliana] Length = 2228 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 76/222 (34%), Gaps = 33/222 (14%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHDEK 55 + Y + Y L+ G+ + + + ++ ++ N E + +HD + Sbjct: 926 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLHDMR 985 Query: 56 --------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLD 95 + + + +++ L L+ + Sbjct: 986 IKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVA 1045 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ K + +CG G+NL + ++ + ++ + + Sbjct: 1046 DRQAAIARFNQDKNRFVFLLSTRACGLGINL-ATADTVIIYDSDFNP-----HADIQAMN 1099 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + + VY L+ + +++E +LQ + K + L +N Sbjct: 1100 RAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1141 >gi|168209499|ref|ZP_02635124.1| putative helicase [Clostridium perfringens B str. ATCC 3626] gi|170712417|gb|EDT24599.1| putative helicase [Clostridium perfringens B str. ATCC 3626] Length = 1067 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 71/195 (36%), Gaps = 22/195 (11%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 + + N + K ++ + + K+ ++ I++ + I++ Sbjct: 861 EKSGRDKINLFAYLTKLREICLDPSLVVPDYTGE---SSKLTVVKEIVKDASESGKKILL 917 Query: 74 AYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 F S L G + ++++N + I + + G G Sbjct: 918 FSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVG 977 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL ++++ F WW+ +E R + G + V V L+A++TI+E ++ Sbjct: 978 LNLTS-ASVVIHFDPWWNPA-----VEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVL 1031 Query: 183 RLRTKSTIQDLLLNA 197 K + L++ Sbjct: 1032 MQEDKRELIQSLMDG 1046 >gi|326468544|gb|EGD92553.1| SNF2 family ATP dependent chromatin remodeling factor snf21 [Trichophyton tonsurans CBS 112818] Length = 1352 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + D +G ++ ++ +L N +D + Sbjct: 778 KLYKQLVTHNKLAVSDGKGGKTPVRGLSNMLMQLRKLCNHPFVFDSVEEELNPGKATNDL 837 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K + +++ + + ++ Sbjct: 838 IWRTAGKFELLDRILPKFFASGHRVLMFFQMTQIMNIMEDFLRFRGMKYLRLDGATKSDD 897 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +NE + G GLNLQ + ++ + W+ + + Sbjct: 898 RSDLLRRFNEPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 951 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 952 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 996 >gi|150864381|ref|XP_001383167.2| chromatin remodeling complex Adenosinetriphosphatase [Scheffersomyces stipitis CBS 6054] gi|149385637|gb|ABN65138.2| chromatin remodeling complex Adenosinetriphosphatase [Scheffersomyces stipitis CBS 6054] Length = 1222 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 83/228 (36%), Gaps = 39/228 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 + Q + Y L ++I+A N + ++ + N + Sbjct: 541 EMQIQWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTND 600 Query: 47 HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTL 94 + K+ L+ +++K + +++ + L L+ + Sbjct: 601 EHLVFNSGKMVILDKMLQKFKSEGSRVLIFSQMSRLLDILEDYCYLRDYSYCRIDGSTSH 660 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I ++N+ + + + G G+NL +I++ + W+ + + Sbjct: 661 EDRIEAIDQYNDPESDKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQA 714 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G K+ V VY + +N I+E VL R K + L++ ++ Sbjct: 715 MDRAHRIGQKKQVKVYRFVTENAIEEKVLDRAAQKLRLDQLVIQQGRQ 762 >gi|323453618|gb|EGB09489.1| hypothetical protein AURANDRAFT_71326 [Aureococcus anophagefferens] Length = 1707 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 69/189 (36%), Gaps = 24/189 (12%) Query: 29 TVKCLQLANGAVYYDEE----KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 ++ + N + + K L+ ++ K +++ + + Sbjct: 679 LMQLRKCCNHPFLFRTDAWRVDESLVRSSGKFLLLDSMLPKLKAAGHRVLLFSQMTALMD 738 Query: 83 RLQKAF----------PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGN 130 L+ F D+ + +N+ P + + G GLNL + Sbjct: 739 LLEDFFALRDYDYLRLDGSTAADERERRMARFNDPSSPAFVFLLSTRAGGLGLNL-ASAD 797 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +V F W+ M++ R + G K V V+ LI+ + ++E +LQR K + Sbjct: 798 TVVIFDSDWNP-----MMDAQAQDRAHRIGQKNDVRVFRLISTSPVEERILQRATDKLNM 852 Query: 191 QDLLLNALK 199 +L++ A K Sbjct: 853 NNLIVEAGK 861 >gi|119612877|gb|EAW92471.1| INO80 complex homolog 1 (S. cerevisiae), isoform CRA_c [Homo sapiens] Length = 1616 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1114 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1173 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1174 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1232 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1233 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1282 >gi|149604227|ref|XP_001512847.1| PREDICTED: similar to chromatin remodeling factor CHROM1 isoform 2 [Ornithorhynchus anatinus] Length = 2876 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 72/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEE-----KHWKEVHD- 53 K Y + + L N + ++ + N ++E H Sbjct: 1108 KYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETHSP 1167 Query: 54 --------------EKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 TAPDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + R K + +L ++ Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGR 1337 >gi|119607236|gb|EAW86830.1| chromodomain helicase DNA binding protein 7, isoform CRA_a [Homo sapiens] gi|119607239|gb|EAW86833.1| chromodomain helicase DNA binding protein 7, isoform CRA_a [Homo sapiens] Length = 3011 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1231 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1290 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1291 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1350 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1351 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1407 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1408 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1460 >gi|320533736|ref|ZP_08034345.1| hypothetical protein HMPREF9057_02235 [Actinomyces sp. oral taxon 171 str. F0337] gi|320134049|gb|EFW26388.1| hypothetical protein HMPREF9057_02235 [Actinomyces sp. oral taxon 171 str. F0337] Length = 199 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 59/169 (34%), Gaps = 16/169 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--------F 88 + KI+ L ++ + ++ F L+ +++ Sbjct: 24 PAKGQRGPGRRPSPSAKIQVLLEHLDPIISEGHRALIFSQFTRYLSGVREHLEAAGVRTT 83 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I + G+ + + G GL L + + WW+ + +Q + Sbjct: 84 YLDGSTPDRQRVIDAFRAGQADVFLISLKAGGFGLTLTE-ADYVFLLDPWWNPQAEEQAV 142 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G + V VY L++ +TI+E V+ K+ + ++ Sbjct: 143 DR-----THRIGQDKPVMVYRLVSADTIEEKVMALKEKKAELFARVVEG 186 >gi|123123062|emb|CAM19310.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Mus musculus] Length = 1033 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 392 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 451 Query: 43 --DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 + K+ AL+ ++ K + +++ L L+ Sbjct: 452 PPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRL 511 Query: 98 ---------------------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I +N + + G G+NL ++++ Sbjct: 512 DGQTPHEEREDKFLEVELLGQREAIDAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 570 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 571 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 625 Query: 195 LNALK 199 + + Sbjct: 626 IQQGR 630 >gi|149692054|ref|XP_001503533.1| PREDICTED: INO80 complex homolog 1 (S. cerevisiae) [Equus caballus] Length = 1561 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1088 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1147 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1148 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1206 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1207 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1256 Score = 35.1 bits (79), Expect = 6.4, Method: Composition-based stats. Identities = 13/134 (9%), Positives = 34/134 (25%), Gaps = 3/134 (2%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVII 63 + Q + + ++ ++ N ++ ++ W H K + I Sbjct: 789 EDLLQSSMGSTQQAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQISKFI 848 Query: 64 EKANAAPIIVAY--HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + + + L +L +E + + PA + Sbjct: 849 YRHGQIRVFNHSRDRWLRVLLSPFAPDYIQESLFHRKGVNEESCFSFLRFIDVSPAEMAN 908 Query: 122 GLNLQYGGNILVFF 135 + L F Sbjct: 909 LMLQGLLARWLALF 922 >gi|126309162|ref|XP_001369227.1| PREDICTED: similar to chromodomain helicase DNA binding protein 3 [Monodelphis domestica] Length = 2131 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 1162 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1221 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1222 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1281 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1282 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1335 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1336 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1377 >gi|224071533|ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222840937|gb|EEE78484.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2327 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 77/222 (34%), Gaps = 33/222 (14%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHDEK 55 + Y + Y L+ G+ + + + ++ ++ N + + +H+ + Sbjct: 997 EYYRAMLTKNYQMLRNIGKGVAQQSMLNIVMQLRKICNHPYLIPGTEPDSGSLEFLHEMR 1056 Query: 56 --------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLD 95 + + I +++ L L+ ++ Sbjct: 1057 IKASAKLTLLHSMLKILYKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVS 1116 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ K + SCG G+NL + ++ + ++ + + Sbjct: 1117 DRQTAIARFNQDKSRFVFLLSTRSCGLGINL-ASADTVIIYDSDFNP-----HSDIQAMN 1170 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + + VY L+ + +++E +LQ R K + L +N Sbjct: 1171 RAHRIGQSKRLLVYRLVVRASVEERILQLARKKLVLDQLFVN 1212 >gi|255726422|ref|XP_002548137.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida tropicalis MYA-3404] gi|240134061|gb|EER33616.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida tropicalis MYA-3404] Length = 1286 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 77/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y + + + + A + K ++ ++ N ++E + Sbjct: 746 LYQQMLKHNALFVGADVGGAKSGIKGLNNKIMQLRKICNHPFVFEEVEAVLNSSRLTNDL 805 Query: 53 ----DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K + +++ + + ++ G + Sbjct: 806 IWRVSGKFELLDRILPKFKKSGHRVLMFFQMTQVMDIMEDFLRWRNMKYLRLDGGTKAED 865 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + +V F W+ + + Sbjct: 866 RQDMLKVFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVVIFDTDWNPHQ-----DLQAQD 919 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 920 RAHRIGQKNEVRILRLITNDSVEEMILERAHQKLDIDGKVIQAGK 964 >gi|156051220|ref|XP_001591571.1| hypothetical protein SS1G_07017 [Sclerotinia sclerotiorum 1980] gi|154704795|gb|EDO04534.1| hypothetical protein SS1G_07017 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1410 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEVHD----- 53 + Y + + + ++ +L N + E + ++ Sbjct: 777 RLYKQMVTHNKLVVSDGKGGKTGAKGLSNMIMQLRKLCNHPFVFREVEDQMNPNNFINDT 836 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K +++ + + + + + D Sbjct: 837 LWRSAGKFELLDRILPKYQATGHRVLMFFQMTAIMDIMGEFLDYRGIKFMRLDGTTKSDD 896 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N P + G GLNLQ + ++ + W+ + + Sbjct: 897 RSLLLKEFNAPDSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 950 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A + Sbjct: 951 RAHRIGQKNEVRILRLISSNSVEEKILERAKFKLDMDGKVIQAGR 995 >gi|110800073|ref|YP_695594.1| putative helicase [Clostridium perfringens ATCC 13124] gi|110674720|gb|ABG83707.1| putative helicase [Clostridium perfringens ATCC 13124] Length = 1069 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 71/195 (36%), Gaps = 22/195 (11%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 + + N + K ++ + + K+ ++ I++ + I++ Sbjct: 863 EKSGRDKINLFAYLTKLREICLDPSLVVPDYTGE---SSKLTVVKEIVKDASESGKKILL 919 Query: 74 AYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 F S L G + ++++N + I + + G G Sbjct: 920 FSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVG 979 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL ++++ F WW+ +E R + G + V V L+A++TI+E ++ Sbjct: 980 LNLTS-ASVVIHFDPWWNPA-----VEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVL 1033 Query: 183 RLRTKSTIQDLLLNA 197 K + L++ Sbjct: 1034 MQEDKRELIQSLMDG 1048 >gi|307727814|ref|YP_003911027.1| SNF2-related protein [Burkholderia sp. CCGE1003] gi|307588339|gb|ADN61736.1| SNF2-related protein [Burkholderia sp. CCGE1003] Length = 1227 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 64/158 (40%), Gaps = 16/158 (10%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQ 102 K+ L ++ + +++ F L+ + +A + +Q Sbjct: 1052 SAKLDLLLSMLPELIEEGRRVLLFSQFTGMLSLIAQALDEAAIAYVILTGDTADRITPVQ 1111 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + +G++PL + G GLNL + ++ + WW+ E R + G Sbjct: 1112 RFQQGEVPLFLISLKAGGVGLNLTA-ADTVIHYDPWWNPAA-----ENQATDRAHRLGQD 1165 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + VFVY LIA +I+E +++ K+ + D +L+ Sbjct: 1166 KPVFVYKLIAAGSIEEKIVELQEQKAGLADSILSEDAA 1203 >gi|156846474|ref|XP_001646124.1| hypothetical protein Kpol_1039p15 [Vanderwaltozyma polyspora DSM 70294] gi|156116797|gb|EDO18266.1| hypothetical protein Kpol_1039p15 [Vanderwaltozyma polyspora DSM 70294] Length = 1385 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 73/227 (32%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVH---- 52 + Y + + A +K ++ ++ N +DE + Sbjct: 759 QLYQQMLNHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEVEGVVNPTRGNS 818 Query: 53 ------DEKIKALEVIIEKA--NAAPIIVAYH----------FNSDLARLQKAFPQGRTL 94 K + L+ ++ K + +++ + F Sbjct: 819 TLLYRVSGKFELLDRVLPKFKASGHRVLIFFQMTQVMDIMEDFLRMRDLKYMRLDGATKA 878 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 879 EDRTDMLKVFNAPNSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 932 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 933 QDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGK 979 >gi|54112403|ref|NP_060250.2| chromodomain-helicase-DNA-binding protein 7 [Homo sapiens] gi|148877246|sp|Q9P2D1|CHD7_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 7; Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7 gi|119607240|gb|EAW86834.1| chromodomain helicase DNA binding protein 7, isoform CRA_d [Homo sapiens] gi|225000838|gb|AAI72443.1| Chromodomain helicase DNA binding protein 7 [synthetic construct] Length = 2997 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1216 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1275 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1276 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1335 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1336 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1392 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1393 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1445 >gi|297682946|ref|XP_002819164.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Pongo abelii] Length = 2997 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1216 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1275 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1276 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1335 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1336 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1392 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1393 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1445 >gi|301095371|ref|XP_002896786.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108669|gb|EEY66721.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 1092 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 80/232 (34%), Gaps = 40/232 (17%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------- 42 K Y + QRE Y + + N+ + ++ ++ N + Sbjct: 383 KLYVGLSEMQREWYMRVLHRDATHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGP 442 Query: 43 -DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD---- 95 +E + K+ L ++ +A + +++ S + L+ Sbjct: 443 PYQEGPHLWENCGKMTLLHKLLPKLQAQGSRVLIFCQMTSMMDILEDYMRYFSHDYCRLD 502 Query: 96 ------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++E+NE + G G+NL +I++ F W+ + Sbjct: 503 GSTKGEDRDNMMEEFNEPGSSKFCFLLSTRAGGLGINL-ATADIVILFDSDWNPQ----- 556 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I T++E +++R K + ++ + Sbjct: 557 VDLQAMDRAHRIGQTKIVRVFRFITDGTVEEKIVERAERKLYLDAAIIQQGR 608 >gi|256072789|ref|XP_002572716.1| helicase [Schistosoma mansoni] gi|238657880|emb|CAZ28948.1| helicase, putative [Schistosoma mansoni] Length = 2395 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 70/182 (38%), Gaps = 19/182 (10%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 K QL + + K++ L ++ + + +++ L L++ Sbjct: 1323 KLHQLVMSCRIQFPDPRLIQYDCGKLQRLHSLLRELKSGNHRVLIFTQMARMLDILEQFL 1382 Query: 89 PQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + ++ +N + +I + S G G+NL G + ++F+ Sbjct: 1383 AYHGHRYLRLDGTTKVEQRQVLMERFNQDSQIFVFILSTRSGGLGINLT-GADTVIFYDS 1441 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 1442 DWNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILRKANQKRFLSDVAIEG 1496 Query: 198 LK 199 K Sbjct: 1497 GK 1498 >gi|323452051|gb|EGB07926.1| hypothetical protein AURANDRAFT_26999 [Aureococcus anophagefferens] Length = 639 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 28/233 (12%), Positives = 77/233 (33%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSA---------SKTVKCLQLANGAVYY------ 42 +K Y + QR Y + ++ N+ + ++ ++ N + Sbjct: 357 VKLYIGMTEMQRLWYTKILSKDAHTLNALGGPDRVQLLNILMQLRKVCNHPYLFEGAEPG 416 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAF 88 + + K+ + ++ K A + +++ L Sbjct: 417 PPFMDGPHLWENTGKLVLMSKLLPKLMAQDSRVLIFSQMTRMLDILEDYMRLNQYKYCRI 476 Query: 89 PQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + D + +N + G G+NL +I+V + W+ + Sbjct: 477 DGSTSGDDRDSQMDVFNAPGSEKFAFLLSTRAGGLGINL-ATADIVVLYDSDWNPQ---- 531 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ + + T++E +++R K + ++ + Sbjct: 532 -VDLQAMDRAHRIGQTKPVTVFRFVTEGTVEEKIIERADRKLFLDAAVIQQGR 583 >gi|322825988|gb|EFZ30789.1| DNA repair and recombination protein RAD54, putative [Trypanosoma cruzi] Length = 1044 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 70/218 (32%), Gaps = 49/218 (22%) Query: 26 ASKTVKCLQLANGAVYYDE--------------------------EKHWKEVHDEKIK-- 57 +L N + E E K+ Sbjct: 643 LVLISALRKLCNHMDLFYEAVLNSSKEEVGEGRGIPKSVLPKGYKSGTLSEAAGGKMHFV 702 Query: 58 --ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ + + +++ +F L + Q + + + +N Sbjct: 703 SLMLDELRNNGDRDKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFN 762 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL G N L+ F W+ + + R + G K+ Sbjct: 763 VPESQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPAN-----DAQAMGRVWRDGQKK 816 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VF+Y L++ +I+E + QR +K + +++ +K + Sbjct: 817 RVFIYRLLSAGSIEEKIYQRQVSKQGLSANVVD-MKSD 853 >gi|307136401|gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo] Length = 2374 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 76/222 (34%), Gaps = 33/222 (14%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHDEK 55 + Y + Y L+ G+ + + + ++ ++ N E + +H+ + Sbjct: 1055 EYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSVEFLHEMR 1114 Query: 56 --------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLD 95 + + I +++ L L+ ++ Sbjct: 1115 IKASAKLTLLHSMLKILHKEGHRVLLFSQMTKLLDILEDYLTIEFGPKTYERVDGSVSVA 1174 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ K + SCG G+NL + ++ + ++ + + Sbjct: 1175 DRQAAITRFNQDKSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNP-----HADIQAMN 1228 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + VY L+ + +++E +LQ + K + L +N Sbjct: 1229 RAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1270 >gi|291403204|ref|XP_002718017.1| PREDICTED: INO80 complex homolog 1 [Oryctolagus cuniculus] Length = 1559 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1086 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1145 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1146 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1204 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1205 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1254 >gi|119607237|gb|EAW86831.1| chromodomain helicase DNA binding protein 7, isoform CRA_b [Homo sapiens] Length = 2996 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1216 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1275 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1276 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1335 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1336 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1392 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1393 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1445 >gi|71651467|ref|XP_814411.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi strain CL Brener] gi|70879380|gb|EAN92560.1| DNA repair and recombination protein RAD54, putative [Trypanosoma cruzi] Length = 1047 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 70/218 (32%), Gaps = 49/218 (22%) Query: 26 ASKTVKCLQLANGAVYYDE--------------------------EKHWKEVHDEKIK-- 57 +L N + E E K+ Sbjct: 643 LVLISALRKLCNHMDLFYEAVLNSSKEEVREGHGIPKSVLPKGYKSGTLSEAAGGKMHFV 702 Query: 58 --ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ + + +++ +F L + Q + + + +N Sbjct: 703 SLMLDELRNNGDRDKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFN 762 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL G N L+ F W+ + + R + G K+ Sbjct: 763 VPESQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPAN-----DAQAMGRVWRDGQKK 816 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VF+Y L++ +I+E + QR +K + +++ +K + Sbjct: 817 RVFIYRLLSAGSIEEKIYQRQVSKQGLSANVVD-MKSD 853 >gi|71662508|ref|XP_818260.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi strain CL Brener] gi|70883500|gb|EAN96409.1| DNA repair and recombination protein RAD54, putative [Trypanosoma cruzi] Length = 1045 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 70/218 (32%), Gaps = 49/218 (22%) Query: 26 ASKTVKCLQLANGAVYYDE--------------------------EKHWKEVHDEKIK-- 57 +L N + E E K+ Sbjct: 643 LVLISALRKLCNHMDLFYEAVLNSSKEEVREGRGLPKSVLPKGYKSGTLSEAAGGKMHFV 702 Query: 58 --ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ + + +++ +F L + Q + + + +N Sbjct: 703 SLMLDELRNNGDRDKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFN 762 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G GLNL G N L+ F W+ + + R + G K+ Sbjct: 763 VPESQEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPAN-----DAQAMGRVWRDGQKK 816 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VF+Y L++ +I+E + QR +K + +++ +K + Sbjct: 817 RVFIYRLLSAGSIEEKIYQRQVSKQGLSANVVD-MKSD 853 >gi|296809211|ref|XP_002844944.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Arthroderma otae CBS 113480] gi|238844427|gb|EEQ34089.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Arthroderma otae CBS 113480] Length = 1660 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1373 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1432 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1433 TVLDFQQRPEIFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1486 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1487 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1525 >gi|320166126|gb|EFW43025.1| lymphoid specific helicase variant4 [Capsaspora owczarzaki ATCC 30864] Length = 835 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 68/191 (35%), Gaps = 28/191 (14%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHD---------EKIKALEVIIE--KANAAPIIVAYHF 77 ++ + N + + K++ L+ ++ + +++ Sbjct: 594 LMQLRKCCNHPYLLNFPLDSAGLPRVDEELIQACGKLRLLDELLPALRRKGHKVLIFSQM 653 Query: 78 NSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L LQ F T I+ +N + ++ + G G+NL Sbjct: 654 TRMLDLLQDYFELRNTAVCRLDGAVSLADRQEQIRSFNSDPEVFAFLLSTRAGGLGINL- 712 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + ++ + W+ + + R + G + V VY L+ NT+++ +++R Sbjct: 713 IAADTVILYDSDWNPQA-----DLQAQDRCHRIGQTKPVIVYRLVTANTVEQRIIERAMA 767 Query: 187 KSTIQDLLLNA 197 K ++ L+++ Sbjct: 768 KRKLEKLVIHE 778 >gi|296226562|ref|XP_002758984.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like isoform 1 [Callithrix jacchus] gi|296226564|ref|XP_002758985.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like isoform 2 [Callithrix jacchus] Length = 2994 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1216 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1275 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1276 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1335 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1336 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1392 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1393 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1445 >gi|226290625|gb|EEH46109.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Paracoccidioides brasiliensis Pb18] Length = 1332 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSAS-KTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + S ++ +L N ++ + Sbjct: 691 KLYKQLVTHNKLVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 750 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K + +++ + + ++ D Sbjct: 751 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 810 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 811 RSDLLKEFNAPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 864 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R + K + ++ A K Sbjct: 865 RAHRIGQKNEVRILRLITSNSVEERILERAQFKLDMDGKVIQAGK 909 >gi|121712698|ref|XP_001273960.1| SNF2 family helicase/ATPase (Ino80), putative [Aspergillus clavatus NRRL 1] gi|206558079|sp|A1C9W6|INO80_ASPCL RecName: Full=Putative DNA helicase ino80 gi|119402113|gb|EAW12534.1| SNF2 family helicase/ATPase (Ino80), putative [Aspergillus clavatus NRRL 1] Length = 1707 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 58/159 (36%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1417 DSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1476 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1477 TVADFQQRPDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1530 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1531 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1569 >gi|72012428|ref|XP_783733.1| PREDICTED: similar to putative recombination factor GdRad54 [Strongylocentrotus purpuratus] gi|115973296|ref|XP_001183354.1| PREDICTED: similar to putative recombination factor GdRad54 [Strongylocentrotus purpuratus] Length = 834 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 82/230 (35%), Gaps = 42/230 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE------------------ 44 Y ++ + + + + + ++ S +L N + Sbjct: 514 IYQQYVKAMMKECRMKTQGKVSTLSAITHLKKLCNHPALVYDKCVSSKDGFHDMLQNFPP 573 Query: 45 ---EKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFP--------- 89 K + K++ L+ I+ + +++ +++ ++ L ++ Sbjct: 574 GYNNKQLRPELSGKMQVLDYILAITKTSSSDKVVLVSNYTQTLDVFEQLCRLRGYLFVRL 633 Query: 90 -QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ K + +N P + + G GLNL G N LV F W+ Sbjct: 634 DGSMSIKKRAKVVDSFNNPNSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN--- 689 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ F+Y L+A TI+E + QR K + +++ Sbjct: 690 --DDQAMARVWRDGQKKRCFIYRLLATGTIEEKIFQRQAHKKALSSCVVD 737 >gi|313230046|emb|CBY07750.1| unnamed protein product [Oikopleura dioica] Length = 1656 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 86/238 (36%), Gaps = 48/238 (20%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEV------------- 51 Q+ LY + ++ N+ +L N V ++ + Sbjct: 1361 LQKRLYEEFTRSKLKKRNATLAIQYLQKLCNHPTLVLTSAHPDYQSIMTDLDRNGSSIRD 1420 Query: 52 --HDEKIKALEVIIEKA----------NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--- 96 H KIKAL+ ++ + + ++ S L +++ + L Sbjct: 1421 IEHAPKIKALKQLLTECGIGQRNGSVVSEHRALIFCQHKSMLDIIERDLFKSNQLPSVSF 1480 Query: 97 -----------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + +N + I +L G GLNL G ++++F W+ + Sbjct: 1481 SRLDGSVPAGARHGIVSRFNRDPTIDVLLLTTKVGGLGLNLT-GADVVIFVEHDWNPQ-- 1537 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++ + R + G K+ V VY LI +NT++E ++ + K +I + L++ Sbjct: 1538 ---MDLQAMDRAHRIGQKKTVNVYRLITRNTVEEKIMGLQKFKLSIANSLVSGDNASM 1592 >gi|289615410|emb|CBI57811.1| unnamed protein product [Sordaria macrospora] Length = 1126 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 76/224 (33%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + G+ + ++ + N + Sbjct: 423 VKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 482 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ +++ + + +++ + L L+ G + Sbjct: 483 VYNAGKMLVLDKLLKRLQKQGSRVLIFSQMSRLLDILEDYCVFRQYKYCRIDGGTAHEDR 542 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + + + R Sbjct: 543 IAAIDEYNKPGSDKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDR 596 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY + N I+E VL+R K + L++ + Sbjct: 597 AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQQGR 640 >gi|296214144|ref|XP_002753574.1| PREDICTED: putative DNA helicase INO80 complex homolog 1 [Callithrix jacchus] Length = 1556 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1084 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1143 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1144 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1202 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1203 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1252 >gi|114620586|ref|XP_519780.2| PREDICTED: chromodomain helicase DNA binding protein 7 [Pan troglodytes] Length = 3041 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1260 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1319 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1320 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1379 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1380 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1436 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1437 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1489 >gi|38708321|ref|NP_060023.1| putative DNA helicase INO80 complex homolog 1 [Homo sapiens] gi|114149322|sp|Q9ULG1|INO80_HUMAN RecName: Full=Putative DNA helicase INO80 complex homolog 1; Short=hINO80 gi|119612875|gb|EAW92469.1| INO80 complex homolog 1 (S. cerevisiae), isoform CRA_b [Homo sapiens] gi|119612876|gb|EAW92470.1| INO80 complex homolog 1 (S. cerevisiae), isoform CRA_b [Homo sapiens] gi|148921591|gb|AAI46786.1| INO80 protein [Homo sapiens] gi|168269776|dbj|BAG10015.1| DNA helicase INO80 complex homolog 1 [synthetic construct] Length = 1556 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1083 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1142 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1143 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1201 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1202 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1251 >gi|114656423|ref|XP_510320.2| PREDICTED: INO80 complex homolog 1 [Pan troglodytes] Length = 1556 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1083 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1142 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1143 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1201 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1202 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1251 >gi|320034589|gb|EFW16533.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira] Length = 1621 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1337 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1396 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1397 TVSDFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1450 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1451 LGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1489 >gi|171686228|ref|XP_001908055.1| hypothetical protein [Podospora anserina S mat+] gi|170943075|emb|CAP68728.1| unnamed protein product [Podospora anserina S mat+] Length = 1895 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 79/249 (31%), Gaps = 59/249 (23%) Query: 1 MKQYHKF-QRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYYDEEKHW------- 48 +K + F ++E + + + +L N + H Sbjct: 1566 LKLFEDFTKKEAKTITEEAGRDDKEAKQHIFQALQYMRKLCNSPALVMKPGHRAYDDTQK 1625 Query: 49 ----------KEVHDEKIKALEVIIEKA-----------------NAAPIIVAYHFNSDL 81 H K+ AL ++ + ++ L Sbjct: 1626 FLARQGTSLEDPAHAPKLTALRDLLVECGIGVEGQESSDPLYTPIKPHRALIFCQMKEML 1685 Query: 82 ARLQKAFPQGRTL-------------DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 +Q +G ++ + ++N + +L + G GLNL Sbjct: 1686 DMVQNTVLKGMLPSTQYLRLDGSVEANRRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT- 1744 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R K Sbjct: 1745 GADTVIFVEHDWNPQK-----DLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFK 1799 Query: 188 STIQDLLLN 196 + ++N Sbjct: 1800 IDVASTVVN 1808 >gi|164426583|ref|XP_956548.2| chromatin remodelling complex ATPase chain ISW1 [Neurospora crassa OR74A] gi|157071396|gb|EAA27312.2| chromatin remodelling complex ATPase chain ISW1 [Neurospora crassa OR74A] Length = 1126 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 76/224 (33%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + G+ + ++ + N + Sbjct: 423 VKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 482 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ +++ + + +++ + L L+ G + Sbjct: 483 VYNAGKMLVLDKLLKRLQKQGSRVLIFSQMSRLLDILEDYCVFRQYKYCRIDGGTAHEDR 542 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I++ + W+ + + + R Sbjct: 543 IAAIDEYNKPDSDKFVFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 596 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY + N I+E VL+R K + L++ + Sbjct: 597 AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQQGR 640 >gi|150015858|ref|YP_001308112.1| non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] gi|149902323|gb|ABR33156.1| Non-specific serine/threonine protein kinase [Clostridium beijerinckii NCIMB 8052] Length = 979 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 78/206 (37%), Gaps = 22/206 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + + + ++ S K ++ E+ + KI+ + I Sbjct: 758 VYSNYVKRVKAAMKNNKDGRIEIFSYLTKLREICLDPSLILEDYN---GGSGKIEEVVEI 814 Query: 63 IEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDK-DPCTIQEWN-EGKI 109 I+ + I++ F S L R+ + G+T K ++++N + Sbjct: 815 IKNHIDSGGKILLFSQFTSALDRIGDRLNKEKIEFFHLSGKTNPKNRIKMVKDFNTNEFV 874 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL N+++ F WW+ +E R + G + V V Sbjct: 875 NVFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----VEAQATDRAHRIGQRDVVEVIK 928 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 L+++ TI+E ++ K + D +L Sbjct: 929 LVSKGTIEEKIILLQEDKKQLIDSIL 954 >gi|323449740|gb|EGB05626.1| hypothetical protein AURANDRAFT_959 [Aureococcus anophagefferens] Length = 472 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 73/219 (33%), Gaps = 34/219 (15%) Query: 4 YHKF--QRELYCDLQGENIEA---FNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y + L A + + ++ + + + + Sbjct: 260 YKALLLKDRDQLKLDDRGPAAGGYKSLVNLLMQLRKTCCHPFLFADAEGCDPGETTLEEL 319 Query: 53 ---DEKIKALEVIIEKAN--AAPIIVAYHFNSD----------LARLQKAFPQGRTLDKD 97 K++ L+ ++ K + ++V F S + Sbjct: 320 VAASGKLRVLDRLLVKLHARKHRVVVFSQFASMVDVLDDYCALRGWPFCRLTGSTNRVQR 379 Query: 98 PCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +NE PL + G G+NLQ + +V + W+ + + + R Sbjct: 380 VVNVRAFNEPSSPLFLFLMTTRAGGLGINLQS-ADTVVLYDSDWNPQA-----DLQAMAR 433 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V +Y L +Q T +E VLQR + K + +++ Sbjct: 434 VHRLGQTKTVHIYRLCSQGTAEERVLQRSQKKLFLSNMV 472 >gi|298710164|emb|CBJ31874.1| Probable chromatin remodelling complex ATPase chain [Ectocarpus siliculosus] Length = 1485 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 69/197 (35%), Gaps = 28/197 (14%) Query: 25 SASKTVKCLQLANGAVYY--------DEEKHWKEVHDEKI--KALEVIIEKANAAPIIVA 74 + ++ + N + D ++ K+ + +++ Sbjct: 532 ILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLIINCGKMVLLDKLLKKLFDKGHRVLIF 591 Query: 75 YHFNSDL---------ARLQKAFPQGRTLDK-DPCTIQEWNEGKI--PLLFAHPASCGHG 122 L R + G T + I +N+ + + G G Sbjct: 592 TQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPDSTKFVFMLSTRAGGLG 651 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NLQ + ++ + W+ + + + R + G KR V VY L+ +NT++E V++ Sbjct: 652 INLQT-ADTVILYDSDWNPQA-----DLQAMDRAHRIGQKRPVSVYRLVTENTVEEKVVE 705 Query: 183 RLRTKSTIQDLLLNALK 199 R + K + +++ + Sbjct: 706 RAQQKLKLDAMIVQQGR 722 >gi|297461261|ref|XP_609360.4| PREDICTED: chromodomain helicase DNA binding protein 5 [Bos taurus] Length = 2048 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 63/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYH-KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y R + + + + N + + Sbjct: 995 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 1054 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1055 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1114 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1115 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1168 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1169 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1210 >gi|297299473|ref|XP_002805403.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like, partial [Macaca mulatta] Length = 2990 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1245 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1304 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1305 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1364 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1365 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1421 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1422 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1474 >gi|242011216|ref|XP_002426351.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212510428|gb|EEB13613.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 4944 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 70/233 (30%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + L + N + ++ + + + ++ Sbjct: 2366 KYYRGILERNFSFLSKGTTSSNIPNLMNTMMELRKCCIHPYLLNGAEEQIQIDYRNVNGD 2425 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K+ ++ ++ K +N +++ L L+ + + Sbjct: 2426 DPDAYFKALIHSSGKMVLVDKLLPKLKSNGHRVLIFSQMVKCLDILEDYLIYRKYSFERI 2485 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I + + + G G+NL + ++ + W+ + Sbjct: 2486 DGRIRGDLRQAAIDRFCRPDSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2541 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V VY LI +NT + + + K + +L ++ Sbjct: 2542 --DLQAQARCHRIGQQKMVKVYRLICRNTYEREMFDKASLKLGLDKAVLQSMN 2592 >gi|126321078|ref|XP_001368272.1| PREDICTED: similar to chromodomain helicase DNA binding protein 7 [Monodelphis domestica] Length = 2999 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 74/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1216 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 1275 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1276 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1335 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I ++ + + G G+NL + + F W+ + Sbjct: 1336 IDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1392 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1393 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1445 >gi|6330933|dbj|BAA86573.1| KIAA1259 protein [Homo sapiens] Length = 1561 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1088 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1147 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1148 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1206 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1207 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1256 >gi|321264716|ref|XP_003197075.1| chromatin remodelling complex ATPase chain [Cryptococcus gattii WM276] gi|317463553|gb|ADV25288.1| Chromatin remodelling complex ATPase chain, putative [Cryptococcus gattii WM276] Length = 1096 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 84/229 (36%), Gaps = 39/229 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYYDEEK-------- 46 + QR+ Y L ++I+A N + ++ + N +D + Sbjct: 451 EMQRKWYKSLLEKDIDAVNGMTGKKEGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPFTTD 510 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ ++ KA + +++ + L L+ Sbjct: 511 QHLVDNAGKMLILDKLLKSMKAKGSRVLIFSQMSRMLDILEDYCQFRGHQYCRIDGSTAH 570 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N + + G G+NL +I+V F W+ + + Sbjct: 571 EDRIAAIDEYNAPGSEKFVFLLTTRAGGLGINLVT-ADIVVLFDSDWNPQA-----DLQA 624 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G + V+V+ I Q+ ++E +L+R K + L++ + + Sbjct: 625 MDRAHRIGQTKQVYVFRFITQDAVEERILERATQKLKLDQLVIQEGRAQ 673 >gi|121708636|ref|XP_001272197.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] gi|119400345|gb|EAW10771.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] Length = 1121 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 77/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 437 IKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 496 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 497 VFNSGKMVILDKLLARMQRQGSRVLIFSQMSRVLDILEDYCVFRDYKYCRIDGTTAHEDR 556 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N+ + + G G+NL +I+V + W+ + + + R Sbjct: 557 IAAIDDYNKPGSEKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDR 610 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I ++ I+E VL+R K + L++ + + Sbjct: 611 AHRIGQTKQVVVFRFITEDAIEEKVLERAAQKLRLDQLVIQQGRAQ 656 >gi|242021397|ref|XP_002431131.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516380|gb|EEB18393.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 745 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 79/228 (34%), Gaps = 42/228 (18%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE------------------- 45 ++ + + + + + S +L N E Sbjct: 427 DALKKTVREEKNSKKGMSLTALSAITTLKKLCNHPDLVYENIMKQTEGFENALKYLPEKY 486 Query: 46 --KHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 K+ + K+ L+ ++ + I++ ++ L +K Sbjct: 487 DIKNVRPEMSGKLMFLDTLLALIKATTNDKIVLVSNYTQTLDLFEKLSRFRNYQYVRLDG 546 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T+ K ++++N+ + + + G GLNL G N LV F W+ Sbjct: 547 SMTIKKRGKVVEKFNDPESKDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN----- 600 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ F+Y L++ TI+E + QR K + +++ Sbjct: 601 DDQAMARVWRDGQKKPCFIYRLLSTGTIEEKIFQRQAHKKALSSTVVD 648 >gi|326478017|gb|EGE02027.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97] Length = 1113 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 75/226 (33%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 431 VKWYQKILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 490 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 491 IDNSGKMVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDR 550 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ F W+ + + + R Sbjct: 551 IQAIDEYNRPGSKKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQA-----DLQAMDR 604 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 605 AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 650 >gi|326473172|gb|EGD97181.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] Length = 1113 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 75/226 (33%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 431 VKWYQKILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 490 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 491 IDNSGKMVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDR 550 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ F W+ + + + R Sbjct: 551 IQAIDEYNRPGSKKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQA-----DLQAMDR 604 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 605 AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 650 >gi|158292419|ref|XP_313902.4| AGAP005035-PA [Anopheles gambiae str. PEST] gi|157016983|gb|EAA09385.4| AGAP005035-PA [Anopheles gambiae str. PEST] Length = 1608 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 64/159 (40%), Gaps = 19/159 (11%) Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCT 100 K+ L+ ++ K +++ + L++ + ++ Sbjct: 1126 GKLAVLDSLLARLKEQGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISERRDMV 1185 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N I + + G G+NL + ++F+ W+ +++ + R + G Sbjct: 1186 ADFQNRADIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHRLG 1239 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V VY LI + TI+E +LQR R KS IQ +++N Sbjct: 1240 QTKQVTVYRLICKGTIEERILQRAREKSEIQRMVINGDN 1278 >gi|68144413|gb|AAY86155.1| chromatin-remodelling complex ATPase ISWI2 [Chlamydomonas reinhardtii] Length = 1086 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 79/223 (35%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q++ Y L ++++A N + ++ + N + Sbjct: 415 EMQKKWYAALLQKDVDALNGGADRAKLLNVVMQLRKCCNHPYLFQGAEPGPPFITGEHLV 474 Query: 51 VHDEKIKALEVIIEKANAA--PIIVAYHFNSDLAR---------LQKAFPQGRTLDK-DP 98 + K+ L+ ++ + +++ + G T + Sbjct: 475 ENSGKLVLLDKLLPRLKERESRVLIFSQMTRMIDILEDYCLYRGYGYCRIDGNTDGEARD 534 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+N + + G G+NL +I+V + W+ + ++ + R Sbjct: 535 NMIDEFNRPNSSKFIFLLSTRAGGLGINL-ATADIVVLYDSDWNPQ-----MDLQAMDRA 588 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ +N+I+E V+++ K + L++ + Sbjct: 589 HRIGQKKEVQVFRFCIENSIEEKVIEKAYKKLRLDALVIQQGR 631 >gi|329947496|ref|ZP_08294696.1| protein, SNF2 family [Actinomyces sp. oral taxon 170 str. F0386] gi|328524738|gb|EGF51795.1| protein, SNF2 family [Actinomyces sp. oral taxon 170 str. F0386] Length = 1205 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 69/191 (36%), Gaps = 27/191 (14%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVA 74 G+ ++ +A+ + + A G K++AL + + +V Sbjct: 1000 GKGMKGKAAAASVKRQRRPARGPS-----------PSAKVEALLEHLRPILSEGHRALVF 1048 Query: 75 YHFNSDLARLQKA--------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 F L+ +++ + I + G+ + + G GL L Sbjct: 1049 SQFTRYLSGVREHLEDAGVRTAYMDGSTPNRQDVIDAFRAGEADVFLISLKAGGFGLTLT 1108 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + WW+ + +Q ++R + G + V VY L++ +TI+E V+ Sbjct: 1109 E-ADYVFLLDPWWNPQAEEQAVDR-----THRIGQDKPVMVYRLVSADTIEEKVMALKEK 1162 Query: 187 KSTIQDLLLNA 197 K+ + ++ Sbjct: 1163 KAELFARVVEG 1173 >gi|110803396|ref|YP_698309.1| DNA/RNA helicase, SNF2 [Clostridium perfringens SM101] gi|110683897|gb|ABG87267.1| putative helicase [Clostridium perfringens SM101] Length = 1069 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 22/195 (11%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 + + N + K ++ + K+ ++ I++ + I++ Sbjct: 863 EKSGRDKINLFAYLTKLREICLDPSLVVPDYK---GGSSKLTVVKEIVKDASESGKKILL 919 Query: 74 AYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 F S L G + ++++N + I + + G G Sbjct: 920 FSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVG 979 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL ++++ F WW+ +E R + G + V V L+A++TI+E ++ Sbjct: 980 LNLTS-ASVVIHFDPWWNPA-----VEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVL 1033 Query: 183 RLRTKSTIQDLLLNA 197 K + L++ Sbjct: 1034 MQEDKRELIQSLMDG 1048 >gi|328698146|ref|XP_001952559.2| PREDICTED: DNA excision repair protein ERCC-6 [Acyrthosiphon pisum] Length = 1136 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 61/195 (31%), Gaps = 23/195 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHW----KEVHDEKIKALEVII--EKANAAPIIVAYHF 77 + + N + K+ +E ++ K +++ Sbjct: 575 KVFVGISRLRTICNHPDIFQTNLETGAFGYWKKSGKMIVVEALLKMWKKQGHRVLLFTQS 634 Query: 78 NSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L QK + I ++N + I ++ G G+NL Sbjct: 635 VKMLNIFQKFIIEQNYSYLKLEGATSIGSRQPIINKFNKDPSIFVMILTTKVGGLGVNL- 693 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++ F W+ + R + G +V +Y L+ TI+E + R Sbjct: 694 IGADRVIIFDPDWNPAT-----DLQARERAWRIGQTNSVTIYRLLTAGTIEEKIYHRQIF 748 Query: 187 KSTIQDLLLNALKKE 201 K + + +L K+ Sbjct: 749 KQFLSNKVLVDPKQR 763 >gi|307211542|gb|EFN87620.1| Chromatin-remodeling complex ATPase chain Iswi [Harpegnathos saltator] Length = 1008 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 83/233 (35%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ N A K ++ + N + Sbjct: 360 IKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPG 419 Query: 43 --DEEKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K ++V L L+ Sbjct: 420 PPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLVFSQMTRMLDILEDYCHWRCFQYCRL 479 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I E+N + + G G+NL ++++ + W+ + Sbjct: 480 DGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 534 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G ++ V V+ I +NT++E +++R K + L++ + Sbjct: 535 -MDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGR 586 >gi|168061453|ref|XP_001782703.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162665796|gb|EDQ52468.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 2113 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 79/226 (34%), Gaps = 32/226 (14%) Query: 3 QYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYD----EEKHWKEVH---- 52 Y ++ Y L N + + + N + E E+ Sbjct: 1134 LYGAILKKNYKQLNRGNTTGKKRSLNFILMDLKMVCNHPYLFPGKEPEHGDADELFRLLI 1193 Query: 53 --DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 K++ L ++ K +++ S L L+ Sbjct: 1194 TASGKLQVLAKLLPRLKEGGHRVLLFSQMKSMLDILEDFLSHLDYKFCRIDGSTPASGRQ 1253 Query: 99 CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N + + + G G+NL + ++ + ++ ++ R Sbjct: 1254 KQIADFNSANSDVFIFLISTRAGGLGINLPS-ADTVIIYDPDFNP-----FVDLQAQARA 1307 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G + V VY LI + +++E + +R R K +++L++++ +K+T Sbjct: 1308 HRIGQRNVVLVYQLITKCSVEEKITERSRQKLAMENLVMSSSEKDT 1353 >gi|311258360|ref|XP_003127576.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Sus scrofa] Length = 1824 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 920 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 979 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 980 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1039 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1040 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1093 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1094 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1135 >gi|119181996|ref|XP_001242158.1| hypothetical protein CIMG_06054 [Coccidioides immitis RS] gi|121937034|sp|Q1DUF9|INO80_COCIM RecName: Full=Putative DNA helicase INO80 Length = 1662 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1378 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1437 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1438 TVSDFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1491 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1492 LGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1530 >gi|322694382|gb|EFY86213.1| chromatin remodelling complex ATPase chain ISW1 [Metarhizium acridum CQMa 102] Length = 1120 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 75/224 (33%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + G+ + ++ + N + Sbjct: 430 VKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 489 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ G + Sbjct: 490 VYNAGKMAVLDKLLVRLQKQGSRVLIFSQMSRLLDILEDYCVFRDYKYCRIDGGTAHEDR 549 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I++ + W+ + + + R Sbjct: 550 IAAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVILYDSDWNPQA-----DLQAMDR 603 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY + N I+E VL+R K + L++ + Sbjct: 604 AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQQGR 647 >gi|28950292|emb|CAD70746.1| related to DNA-dependent ATPase DOMINO B [Neurospora crassa] Length = 1955 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 59/157 (37%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + N +++ + + +++ + Sbjct: 1650 DSGKLAKLDELLRELKENGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1709 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1710 TVADFQTRPEIFIFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1763 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1764 LGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1800 >gi|255947266|ref|XP_002564400.1| Pc22g03590 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591417|emb|CAP97647.1| Pc22g03590 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1100 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 80/227 (35%), Gaps = 39/227 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEK 46 + QR Y + ++I+A N A+ ++ + N + Sbjct: 429 EMQRRWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 488 Query: 47 HWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ ++++ + +++ + L L+ Sbjct: 489 EHLVFNSGKMVILDKLLKRMQADGSRVLIFSQMSRVLDILEDYCCFRDYNYCRIDGTTAH 548 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I ++N+ + + G G+NL +I+V F W+ + + Sbjct: 549 EDRIAAIDDYNKPGSDKFVFLLTTRAGGLGINLTS-ADIVVLFDSDWNPQA-----DLQA 602 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G + V V+ I + I+E VL+R K + L++ + Sbjct: 603 MDRAHRIGQTKQVKVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGR 649 >gi|167522321|ref|XP_001745498.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775847|gb|EDQ89469.1| predicted protein [Monosiga brevicollis MX1] Length = 817 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 28/212 (13%), Positives = 73/212 (34%), Gaps = 28/212 (13%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD---------EKIK 57 R + + ++ ++ ++ N + + K+K Sbjct: 530 LSRAELAQRNSSAVVNVSLQNRLMQLRKVCNHPYLIEYPLTATGDYRIDEALVQQGGKLK 589 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEW- 104 L+ ++ KA +++ L LQ + + ++ Sbjct: 590 ILDQLLPRIKAEGRKVLIFSQMTKMLDILQDYCWLRDYGFVRLDGSVHYTEREEALDKFA 649 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GLNL + + + W+ ++ + R + G + Sbjct: 650 KDSDTFIFLLSTRAGGLGLNLVS-ADTCIIYDSDWNPQQ-----DLQAQDRCHRIGQRNP 703 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V +Y LI NT+D+ +L+R +K ++ ++++ Sbjct: 704 VIIYRLITANTVDQRILERAESKRRLEKMVMH 735 >gi|156405034|ref|XP_001640537.1| predicted protein [Nematostella vectensis] gi|156227672|gb|EDO48474.1| predicted protein [Nematostella vectensis] Length = 1429 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ------- 90 ++ K+ L+ ++ K +++ + L++ Sbjct: 973 FVQMPNRNSVISDSGKLTVLDGLLTKLKLQGHRVLIYSQMTRMIDILEEYMTFRKHKYMR 1032 Query: 91 ----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + D+ N I + + G G+NL + ++F+ W+ Sbjct: 1033 LDGSSKISDRRDMVADFQNNKDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT---- 1087 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ + R + G + V VY L+ +NTI+E +LQR R KS IQ ++++ Sbjct: 1088 -VDEQAMDRAHRLGQTKQVTVYRLVTKNTIEERILQRAREKSEIQKMVISG 1137 >gi|324500954|gb|ADY40432.1| Chromatin-remodeling complex ATPase chain isw-1 [Ascaris suum] Length = 1053 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 81/233 (34%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFN---------SASKTVKCLQLANGAVYYD----- 43 +K Y K QRE Y + ++I+ N + + + N +D Sbjct: 384 VKIYVGLSKMQREWYTKILLKDIDVVNGAGKLEKARIMNILMHLRKCCNHPYLFDGAEPG 443 Query: 44 -----EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 ++ + + K + +++ + L L+ Sbjct: 444 PPYTTDQHLVDNAGKMVLLDKLLKKLKEQGSRVLIFSQMSRMLDLLEDYCWWRNYQYCRL 503 Query: 96 -------KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +I E+N + + G G+NL ++++ + W+ + Sbjct: 504 DGQTAHADRQMSIDEFNRPDSEKFIFMLTTRAGGLGINLTA-ADVVIIYDSDWNPQ---- 558 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ I ++T+DE +++R K + +++ + Sbjct: 559 -VDLQAMDRAHRIGQKKQVRVFRFITESTVDERIIERAEMKLHLDSIVIQQGR 610 >gi|293358005|ref|XP_230473.5| PREDICTED: yeast INO80-like protein [Rattus norvegicus] Length = 1559 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 70/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL++++ K+ +++ + L++ Sbjct: 1086 NGWSFIRIPGKESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1145 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ I + + G G+NL + ++F+ W+ Sbjct: 1146 TYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1204 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1205 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1254 >gi|269955093|ref|YP_003324882.1| Non-specific serine/threonine protein kinase [Xylanimonas cellulosilytica DSM 15894] gi|269303774|gb|ACZ29324.1| Non-specific serine/threonine protein kinase [Xylanimonas cellulosilytica DSM 15894] Length = 1102 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 66/210 (31%), Gaps = 21/210 (10%) Query: 2 KQYHK-FQREL---YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y QRE L + ++A A + + K+ Sbjct: 878 RAYDARLQRERTRVLGMLDDVDGNRLAIFKSLTTLRRMALDASLV-DPSASAGIPSSKLD 936 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLARL--------QKAFPQGRTLDKDPCTIQEWNEG 107 L + + +V F L+ + + + + ++ + EG Sbjct: 937 VLVEQVAEVVAEGHRALVFSQFTGYLSLVAARLDALGLRFAYLDGSTRRRADVVRGFREG 996 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 PL + G GLNL + + WW+ E V R + G R V V Sbjct: 997 DAPLFLISLKAGGFGLNLTE-ADHVFLLDPWWNPAT-----EAQAVDRTHRIGQTRPVNV 1050 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++A TI+E V+ K+ +L Sbjct: 1051 VRMVAAGTIEEKVMALKERKAAAVGAVLGD 1080 >gi|115727572|ref|XP_788696.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 2 [Strongylocentrotus purpuratus] gi|115939380|ref|XP_001176134.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 2 [Strongylocentrotus purpuratus] Length = 1019 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 83/232 (35%), Gaps = 40/232 (17%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------- 42 K Y QRE Y + ++I+ N A K + + N + Sbjct: 368 KMYVGMSIMQREWYTKILMKDIDVVNGAGKSDKMRLMNILMHLRKCGNHPYLFDGAEPGP 427 Query: 43 -DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG-------- 91 + K+ L+ ++ K + +++ L L+ Sbjct: 428 PYTTDKHLVENSGKMSVLDKLLPKLKEQGSRVLIFSQMTRLLDILEDYCVWRGHNYCRLD 487 Query: 92 --RTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + +I +N + + G G+NL +I+V + W+ + Sbjct: 488 GQTPHAERQESINNFNMPDSEKFVFLLSTRAGGLGINL-ATADIVVLYDSDWNPQ----- 541 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ I++NT++E +++R K + ++++ + Sbjct: 542 VDLQAMDRAHRIGQKKQVHVFRFISENTVEERIVERAEMKLRLDNIVIQQGR 593 >gi|303318869|ref|XP_003069434.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240109120|gb|EER27289.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1688 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1378 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1437 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1438 TVSDFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1491 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1492 LGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1530 >gi|164423223|ref|XP_958688.2| hypothetical protein NCU08919 [Neurospora crassa OR74A] gi|157069998|gb|EAA29452.2| hypothetical protein NCU08919 [Neurospora crassa OR74A] Length = 1942 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 59/157 (37%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + N +++ + + +++ + Sbjct: 1641 DSGKLAKLDELLRELKENGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1700 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1701 TVADFQTRPEIFIFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1754 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1755 LGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1791 >gi|330797148|ref|XP_003286624.1| hypothetical protein DICPUDRAFT_54372 [Dictyostelium purpureum] gi|325083372|gb|EGC36826.1| hypothetical protein DICPUDRAFT_54372 [Dictyostelium purpureum] Length = 1848 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 71/187 (37%), Gaps = 19/187 (10%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ 85 + L + + K++ L+ +++ K +++ F + L+ Sbjct: 1484 LMGELNHLYGSSSIWMPSFSKSLNDSGKLQVLDKLLKDLKEGGHRVLIYSQFTKMINILE 1543 Query: 86 KAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + D+ ++ I +CG G+NL + +VF Sbjct: 1544 DFMIYRKYKYLRLDGSSKLEDRRDMVDDFQSDPSIFAFLLSTRACGIGINLTS-ADTVVF 1602 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ ++ + R + G +R V VY LI + TI+E +L+R + K IQ ++ Sbjct: 1603 YDSDWNPT-----VDEQAMDRCHRLGQQRPVTVYRLITKGTIEEKILKRAKQKHHIQSIV 1657 Query: 195 LNALKKE 201 + K E Sbjct: 1658 ITGGKFE 1664 >gi|299755187|ref|XP_001828488.2| SNF2-family ATP dependent chromatin remodeling factor snf21 [Coprinopsis cinerea okayama7#130] gi|298411108|gb|EAU93321.2| SNF2-family ATP dependent chromatin remodeling factor snf21 [Coprinopsis cinerea okayama7#130] Length = 1471 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 79/227 (34%), Gaps = 35/227 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVH---- 52 + Y + ++ ++ + + ++ ++ ++ ++ + Sbjct: 835 QLYKQMKKHKMIADGNKDNKGKSGGIKGLSNELMQLRKICQHPFLFESVEDKMNPSGWID 894 Query: 53 ------DEKIKALEVIIEKA--NAAPIIVAYH----------FNSDLARLQKAFPQGRTL 94 K++ L I+ K +++ + F + G Sbjct: 895 NKLIRASGKVELLSRILPKFFATGHRVLIFFQMTKVMDIMEDFLKFMGWKYLRLDGGTKT 954 Query: 95 DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +Q +N + + + + G GLNLQ + ++ F W+ + Sbjct: 955 EERAQFVQLFNSKDSEYMVFILSTRAGGLGLNLQT-ADTVIIFDSDWNP-----HADLQA 1008 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G RAV + I + +++E + QR R K I D ++ A + Sbjct: 1009 QDRAHRIGQTRAVLILRFITEKSVEEAMYQRARYKLDIDDKVIQAGR 1055 >gi|238880670|gb|EEQ44308.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Candida albicans WO-1] Length = 1302 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 76/225 (33%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y + + + + A + K ++ ++ N ++E + Sbjct: 755 LYQQMLKHNALFVGADVGGAKSGIKGLNNKIMQLRKICNHPFVFEEVESVLNSSRLTNDL 814 Query: 53 ----DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ ++ K + +++ + + ++ + Sbjct: 815 IWRVSGKFELLDRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEE 874 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 875 RQDMLKVFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 928 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 929 RAHRIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKVIQAGK 973 >gi|68471523|ref|XP_720068.1| hypothetical protein CaO19.7869 [Candida albicans SC5314] gi|68471790|ref|XP_719938.1| hypothetical protein CaO19.239 [Candida albicans SC5314] gi|46441784|gb|EAL01078.1| hypothetical protein CaO19.239 [Candida albicans SC5314] gi|46441919|gb|EAL01212.1| hypothetical protein CaO19.7869 [Candida albicans SC5314] Length = 1303 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 76/225 (33%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y + + + + A + K ++ ++ N ++E + Sbjct: 755 LYQQMLKHNALFVGADVGGAKSGIKGLNNKIMQLRKICNHPFVFEEVESVLNSSRLTNDL 814 Query: 53 ----DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ ++ K + +++ + + ++ + Sbjct: 815 IWRVSGKFELLDRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEE 874 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 875 RQDMLKVFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 928 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 929 RAHRIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKVIQAGK 973 >gi|326671885|ref|XP_003199545.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Danio rerio] Length = 1985 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYH-KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y R + + + + N + + + Sbjct: 965 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGN 1024 Query: 48 WKEVHDEKIK--ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ +I K +++ L L+ + Sbjct: 1025 LLVKSSGKLTLLQKMLIKLKDGGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGG 1084 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1085 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1138 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1139 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1180 >gi|289615950|emb|CBI57301.1| putative STH1 protein [Sordaria macrospora] Length = 1486 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 82/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 + Y + Q+ L D +G A ++ ++ +L N +DE ++ + Sbjct: 794 RLYKQMVTHQKILVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPTNTSNDL 853 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ ++ K +++ + + + ++ Sbjct: 854 LWRTAGKFELLDRVLPKYKATGHRVLMFFQMTAIMDIMEDFLRFRGIQYLRLDGTTKSED 913 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N P + G GLNLQ + ++ + W+ + + Sbjct: 914 RSELLRLFNAPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 967 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ +++E +L+R R K + ++ A + Sbjct: 968 RAHRIGQKNEVRILRLISSASVEEKILERARFKLDMDGKVIQAGR 1012 >gi|115744408|ref|XP_793154.2| PREDICTED: similar to Chromodomain helicase DNA binding protein 1-like, partial [Strongylocentrotus purpuratus] gi|115954708|ref|XP_001193945.1| PREDICTED: similar to Chromodomain helicase DNA binding protein 1-like, partial [Strongylocentrotus purpuratus] Length = 852 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 68/224 (30%), Gaps = 32/224 (14%) Query: 2 KQYHKF--QRELYCDLQGENI----EAFNSASKTVKCLQLANGAVYY-------DEEKHW 48 K Y + + + + + + ++ + N + E Sbjct: 244 KLYKAILTKDHAAFEQNVDMVGMPRTRTSLMNTLMQLRKCVNHPYIFDGVEPEPFELGEH 303 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP-------- 98 K+ L+ ++ +++ L LQ + Sbjct: 304 LVDCSGKLHLLDKLLMSLWQQGHKVLLFSQMTRMLDILQDYLGFRGYEYERLDGSVRGEE 363 Query: 99 ---CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + G GLNL G + ++F ++ + + R Sbjct: 364 RYLAVKNFNQRDDTFVFLLSTKAGGQGLNL-VGADTVIFVDSDYNPQN-----DLQAAAR 417 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V + LI +++++EL+LQR K + + ++ K Sbjct: 418 AHRIGQTRPVKIIRLIGRDSVEELILQRADEKLKLTNDVIEGGK 461 >gi|37360298|dbj|BAC98127.1| mKIAA1259 protein [Mus musculus] Length = 1196 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 70/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 723 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 782 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ I + + G G+NL + ++F+ W+ Sbjct: 783 TYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 841 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 842 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 891 >gi|255726412|ref|XP_002548132.1| hypothetical protein CTRG_02428 [Candida tropicalis MYA-3404] gi|240134056|gb|EER33611.1| hypothetical protein CTRG_02428 [Candida tropicalis MYA-3404] Length = 672 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 77/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y + + + + A + K ++ ++ N ++E + Sbjct: 132 LYQQMLKHNALFVGADVGGAKSGIKGLNNKIMQLRKICNHPFVFEEVEAVLNSSRLTNDL 191 Query: 53 ----DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K + +++ + + ++ G + Sbjct: 192 IWRVSGKFELLDRILPKFKKSGHRVLMFFQMTQVMDIMEDFLRWRNMKYLRLDGGTKAED 251 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + +V F W+ + + Sbjct: 252 RQDMLKVFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVVIFDTDWNPHQ-----DLQAQD 305 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 306 RAHRIGQKNEVRILRLITNDSVEEMILERAHQKLDIDGKVIQAGK 350 >gi|210075373|ref|XP_501321.2| YALI0C01243p [Yarrowia lipolytica] gi|199425214|emb|CAG81616.2| YALI0C01243p [Yarrowia lipolytica] Length = 1235 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 80/230 (34%), Gaps = 37/230 (16%) Query: 1 MKQYHKFQRELYCDLQGENIEA------FNSAS-KTVKCLQLANGAVYYDEEKHWKEVHD 53 +K Y + + + ++ A + K ++ ++ N Y+E + Sbjct: 696 LKMYQQMLKYNALYVGDDSGAAGVNKSGVKGLNNKIMQLRKICNHPYVYEEVETLLNPSH 755 Query: 54 E----------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----------QG 91 K + L+ I+ K +++ + + ++ Sbjct: 756 GNNDLLWRSAGKFELLDRILPKFKARDHRVLMFFQMTQIMDIMEDYLRLRGLQYLRLDGN 815 Query: 92 RTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 D ++ +N P + G GLNLQ + ++ + W+ + + Sbjct: 816 TKADDRSEMLKLFNAPDSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDTDWNPHQ-----D 869 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V + LI +++++E++LQR K I ++ A K Sbjct: 870 LQAQDRAHRIGQTKEVRILRLITEDSVEEVILQRAHAKLEIDGKVIQAGK 919 >gi|164656581|ref|XP_001729418.1| hypothetical protein MGL_3453 [Malassezia globosa CBS 7966] gi|159103309|gb|EDP42204.1| hypothetical protein MGL_3453 [Malassezia globosa CBS 7966] Length = 1517 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 63/172 (36%), Gaps = 19/172 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----- 90 G V K+ L+ ++ + +++ + + +++ Sbjct: 1186 GPSMQVPRMDKLIVDSSKLARLDTLLRELKAGGHRVLIYFQMTRMIDLMEEYLIHRQYKY 1245 Query: 91 ------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + D+ ++ + + G G+NL + ++F+ W+ Sbjct: 1246 LRLDGASKISDRRDMVTDWQTRPELFVFLLSTRAGGLGINLTA-ADTVIFYDHDWNPSN- 1303 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G + V VY LI + TIDE +++ R K +QD+++ Sbjct: 1304 ----DSQAMDRAHRLGQTKQVTVYRLITKGTIDERIVKLARNKKEVQDIVVG 1351 >gi|327286054|ref|XP_003227746.1| PREDICTED: hypothetical protein LOC100558176 [Anolis carolinensis] Length = 4477 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 70/179 (39%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L++++ + A +++ L L++ Sbjct: 2854 LHRIVCSMRTQFPDLRLIQYDCGKLQTLDILLRQLKAGAHRVLIFTQMTRMLDVLEQFLN 2913 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2914 YHGHIYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2972 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2973 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 3026 >gi|168212253|ref|ZP_02637878.1| putative helicase [Clostridium perfringens CPE str. F4969] gi|170716039|gb|EDT28221.1| putative helicase [Clostridium perfringens CPE str. F4969] Length = 1067 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 22/195 (11%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 + + N + K ++ + K+ ++ I++ + I++ Sbjct: 861 EKSGRDKINLFAYLTKLREICLDPSLVVPDYT---GGSSKLTVVKEIVKDASESGKKILL 917 Query: 74 AYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 F S L G + ++++N + I + + G G Sbjct: 918 FSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVG 977 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL ++++ F WW+ +E R + G + V V L+A++TI+E ++ Sbjct: 978 LNLTS-ASVVIHFDPWWNPA-----VEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVL 1031 Query: 183 RLRTKSTIQDLLLNA 197 K + L++ Sbjct: 1032 MQEDKRELIQSLMDG 1046 >gi|317138160|ref|XP_001816716.2| ISWI chromatin-remodeling complex ATPase ISW2 [Aspergillus oryzae RIB40] Length = 1122 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 77/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 435 VKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 494 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 495 VYNAGKMSILDKLLARMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTTAHEDR 554 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + + + R Sbjct: 555 IAAIDEYNKPGSDKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDR 608 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 609 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 654 >gi|240274086|gb|EER37604.1| DNA ATP-dependent helicase [Ajellomyces capsulatus H143] Length = 1764 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1467 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1526 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1527 TVLDFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1580 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1581 LGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1619 >gi|109470653|ref|XP_001080838.1| PREDICTED: yeast INO80-like protein-like [Rattus norvegicus] Length = 1559 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 70/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL++++ K+ +++ + L++ Sbjct: 1086 NGWSFIRIPGKESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1145 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ I + + G G+NL + ++F+ W+ Sbjct: 1146 TYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1204 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1205 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1254 >gi|2645435|gb|AAB87384.1| CHD3 [Drosophila melanogaster] Length = 1518 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 70/222 (31%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 K Y + + L + + + + + N + + Sbjct: 523 KFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMS 582 Query: 53 -----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L ++++ A+ +++ L L+ Sbjct: 583 SLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNILEHFLEGEGYQYDRIDGSIKGD 642 Query: 98 --PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N+ + + G G+NL + ++ F W+ + Sbjct: 643 LRQKAIDRFNDPVSEHFVFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDVQAF 696 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G K+ V +Y + N+++E ++Q + K + L++ Sbjct: 697 SRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVV 738 >gi|73956748|ref|XP_546747.2| PREDICTED: similar to chromodomain helicase DNA binding protein 5 [Canis familiaris] Length = 1994 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 1003 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 1062 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1063 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1122 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1123 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1176 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1177 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1218 >gi|156086846|ref|XP_001610830.1| chromo-helicase DNA-binding protein [Babesia bovis T2Bo] gi|154798083|gb|EDO07262.1| chromo-helicase DNA-binding protein, putative [Babesia bovis] Length = 1729 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 77/223 (34%), Gaps = 27/223 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKE------VHD 53 ++ Y Y L + + +S ++ ++ N E + Sbjct: 980 VEWYRNILTRNYDQLAKNSGGSRSSLQNICMELKKVCNHPFLCYEPVDRQSWLQGLVYGS 1039 Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 KI L+ ++ + +++ L + + + + Sbjct: 1040 GKICLLDKLLARLKERGHRVLIFSQMVRMLNIISEYLTMRGFKHQRLDGTMGREVRKKAM 1099 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N+ + G G+NL + ++ + W+ + + R + Sbjct: 1100 DHFNDPNSDDFCFLLSTKAGGLGINLTT-ADTVIIYDSDWNPQN-----DLQAEARAHRI 1153 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G + V +Y L+ +++I++ +L+R +TK + L++ L K+ Sbjct: 1154 GQTKTVQIYRLVTKDSIEQTILERAKTKMVLDALVVQGLNKKG 1196 >gi|222622221|gb|EEE56353.1| hypothetical protein OsJ_05476 [Oryza sativa Japonica Group] Length = 2095 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 80/220 (36%), Gaps = 26/220 (11%) Query: 1 MKQYHKF-----QRELYCDLQGENIE--------AFNSASKTVKCLQLANGAVYYDEEKH 47 +K Y KF ++E+ ++ ++ + L+L + + E Sbjct: 1804 LKLYDKFSNSNAKQEISTIVKENELDQSTSQPKATRHVFQALQYLLKLCSHPLLVTGESP 1863 Query: 48 WKEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLAR--LQKAFPQGRTLDKDPCTI 101 + D + + + ++ ++ + +K + Sbjct: 1864 PDYLVDLLKEIGMGTGDELHDLHHSPKLVALQEILQECGIGVTYLRLDGSVEPEKRFEIV 1923 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +N + I +L G GLNL + LVF W+ M + + R + G Sbjct: 1924 KAFNSDPTIDVLLLTTHVGGLGLNLTS-ADTLVFMEHDWNP-----MKDLQAMDRAHRLG 1977 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++ V V+ LI + T++E V+ R K ++ + ++NA Sbjct: 1978 QRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENA 2017 >gi|193596661|ref|XP_001945595.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like [Acyrthosiphon pisum] Length = 1048 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 87/233 (37%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ N A K ++ + +N + Sbjct: 390 VKVYVGLSKLQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRKCSNHPYLFDGAEPG 449 Query: 43 --DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ + +++ K + ++V + L+ Sbjct: 450 PPYTTDEHIVFNCGKMVVFDKLLKALKEQDSRVLVFSQMTRMMDILEDYMHWKGYNYCRL 509 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I E+NE + + G G+NL ++++ + W+ + Sbjct: 510 DGQTPHEDRQRQINEYNEPNSKKFVFILSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 564 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI +NT++E +++R K + L++ + Sbjct: 565 -MDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAEVKLRLDKLVIQQGR 616 >gi|168216008|ref|ZP_02641633.1| putative helicase [Clostridium perfringens NCTC 8239] gi|182381656|gb|EDT79135.1| putative helicase [Clostridium perfringens NCTC 8239] Length = 1065 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 22/195 (11%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 + + N S K ++ + K+ ++ I++ + I++ Sbjct: 859 EKSGRDKINLFSYLTKLREICLDPSLVVPDYT---GGSSKLTVVKEIVKDASESGKKILL 915 Query: 74 AYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 F S L G + ++++N + I + + G G Sbjct: 916 FSQFTSVLQKIEEDFKKEDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVG 975 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL ++++ F WW+ +E R + G + V V L+A++TI+E ++ Sbjct: 976 LNLTS-ASVVIHFDPWWNPA-----VEDQATDRAHRFGQENKVEVIKLVAKDTIEEKIVL 1029 Query: 183 RLRTKSTIQDLLLNA 197 K + L++ Sbjct: 1030 MQEDKRELIQSLMDG 1044 >gi|70993276|ref|XP_751485.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293] gi|66849119|gb|EAL89447.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293] gi|159125581|gb|EDP50698.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163] Length = 1111 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 77/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 428 VKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 487 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 488 VYNSGKMVILDKLLARMQKQGSRVLIFSQMSRVLDILEDYCVFRDYKYCRIDGTTAHEDR 547 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + + + R Sbjct: 548 IAAIDEYNKPGSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDR 601 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 602 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 647 >gi|326473788|gb|EGD97797.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] gi|326485394|gb|EGE09404.1| SNF2 family helicase/ATPase PasG [Trichophyton equinum CBS 127.97] Length = 861 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 79/220 (35%), Gaps = 27/220 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-------KHWKEVHDEKIK 57 + +R L + I + + ++ + N + + K+ Sbjct: 561 DEIERAKTMKLAKKEISSKKLQNPVMQARLVCNSPLNFYWPWGEDSGVDSTLITSSGKML 620 Query: 58 ALEVIIEK--ANAAPIIVAYHFN------SDLARLQKAFPQGRTL------DKDPCTIQE 103 L+ ++ + +++ F D A +++ R D+ Sbjct: 621 LLDRLVPCLISKGHKVLIFSQFKGQLDILEDWATQLRSWNCCRIDGAIAQADRQEQINAF 680 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N+ + + G G+NL + ++ F W+ ++ + R + G + Sbjct: 681 NNDPDYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTK 734 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V VY L + TI++ +L+R +K ++ L++ K +++ Sbjct: 735 PVIVYRLATRGTIEQTLLERAGSKRRLEKLVIQKGKFKSL 774 >gi|255523219|ref|ZP_05390190.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] gi|255513087|gb|EET89356.1| Non-specific serine/threonine protein kinase [Clostridium carboxidivorans P7] Length = 1005 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 22/206 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y+ + + + ++ S K Q+ +E + K+K + Sbjct: 784 IYNSYIKGVREKVKNNYQGKIEVFSYLTKLRQICLDPSIIFDEYK---GGNGKLKVALSL 840 Query: 63 IEKA--NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEG-KI 109 +++ + +++ F S L + + E+N K+ Sbjct: 841 VKEHITSDGKVLLFSQFTSVLKKIGEALKEDDIEYFYLDGSTKSKERIKLVNEFNSCTKV 900 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL N+++ F WW+ +E R + G K V V Sbjct: 901 KVFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----VEDQATDRAHRIGQKNVVEVIK 954 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 L+A+ TI+E ++ K + ++ Sbjct: 955 LVARGTIEEKIILLQEHKKELIHNII 980 >gi|170755378|ref|YP_001781299.1| Snf2/Rad54 family helicase [Clostridium botulinum B1 str. Okra] gi|169120590|gb|ACA44426.1| helicase, SNF2/RAD54 family [Clostridium botulinum B1 str. Okra] Length = 1077 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++E Y +++ S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIENY---EGSNGK 907 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 + L I+ I++ F S L D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ +E R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQASDRAHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|148379627|ref|YP_001254168.1| helicase, SNF2/RAD54 family [Clostridium botulinum A str. ATCC 3502] gi|153931482|ref|YP_001384006.1| Snf2/Rad54 family helicase [Clostridium botulinum A str. ATCC 19397] gi|153936716|ref|YP_001387549.1| Snf2/Rad54 family helicase [Clostridium botulinum A str. Hall] gi|226948994|ref|YP_002804085.1| helicase, SNF2/RAD54 family [Clostridium botulinum A2 str. Kyoto] gi|148289111|emb|CAL83205.1| putative helicase [Clostridium botulinum A str. ATCC 3502] gi|152927526|gb|ABS33026.1| helicase, SNF2/RAD54 family [Clostridium botulinum A str. ATCC 19397] gi|152932630|gb|ABS38129.1| helicase, SNF2/RAD54 family [Clostridium botulinum A str. Hall] gi|226841046|gb|ACO83712.1| helicase, SNF2/RAD54 family [Clostridium botulinum A2 str. Kyoto] Length = 1077 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++E Y +++ S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIENY---EGSNGK 907 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 + L I+ I++ F S L D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ +E R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQASDRAHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|109475885|ref|XP_001078944.1| PREDICTED: chromodomain helicase DNA binding protein 5 [Rattus norvegicus] Length = 1951 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 63/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYH-KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y R + + + + N + + Sbjct: 956 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGS 1015 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1016 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1075 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1076 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1129 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1130 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1171 >gi|70953850|ref|XP_746001.1| PfSNF2L [Plasmodium chabaudi chabaudi] gi|56526492|emb|CAH76599.1| PfSNF2L, putative [Plasmodium chabaudi chabaudi] Length = 879 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 74/215 (34%), Gaps = 26/215 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEK 55 K Y + + + ++ + N +D + + K Sbjct: 33 KLYSDILSKNIDVINAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHIETSGK 92 Query: 56 IKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + L+ ++ K + +++ L + D+ I + Sbjct: 93 MSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKKYEYLRIDGSTVGDERQIRINK 152 Query: 104 WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +NE + + G G+NL +I++ F ++ + ++ + R + G Sbjct: 153 FNEPNSKYFIFLLSTTAGGIGINLTT-ADIVILFDSDYNPQ-----MDIQAMDRAHRIGQ 206 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K+ V VY + N+++E +++R K + L++ Sbjct: 207 KKRVIVYRFVTHNSVEEKIVERAPKKLKLDSLIIQ 241 >gi|296186183|ref|ZP_06854588.1| SNF2 family [Clostridium carboxidivorans P7] gi|296049451|gb|EFG88880.1| SNF2 family [Clostridium carboxidivorans P7] Length = 1034 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 22/206 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y+ + + + ++ S K Q+ +E + K+K + Sbjct: 813 IYNSYIKGVREKVKNNYQGKIEVFSYLTKLRQICLDPSIIFDEYK---GGNGKLKVALSL 869 Query: 63 IEKA--NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEG-KI 109 +++ + +++ F S L + + E+N K+ Sbjct: 870 VKEHITSDGKVLLFSQFTSVLKKIGEALKEDDIEYFYLDGSTKSKERIKLVNEFNSCTKV 929 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL N+++ F WW+ +E R + G K V V Sbjct: 930 KVFLISLKAGGTGLNLTS-ANLVIHFDPWWNPA-----VEDQATDRAHRIGQKNVVEVIK 983 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 L+A+ TI+E ++ K + ++ Sbjct: 984 LVARGTIEEKIILLQEHKKELIHNII 1009 >gi|302912567|ref|XP_003050729.1| SWI/SNF family of DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4] gi|256731667|gb|EEU45016.1| SWI/SNF family of DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4] Length = 1117 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 75/224 (33%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + G+ + ++ + N + Sbjct: 421 VKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 480 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ G + Sbjct: 481 VYNAGKMAVLDKLLNRLEKQGSRVLIFSQMSRLLDILEDYCVFREYKYCRIDGGTAHEDR 540 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I++ + W+ + + + R Sbjct: 541 IAAIDEYNKPGSEKFIFLLTTRAGGLGINLTT-ADIVILYDSDWNPQA-----DLQAMDR 594 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY + N I+E VL+R K + L++ + Sbjct: 595 AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQQGR 638 >gi|149245518|ref|XP_001527236.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Lodderomyces elongisporus NRRL YB-4239] gi|146449630|gb|EDK43886.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Lodderomyces elongisporus NRRL YB-4239] Length = 1400 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 78/227 (34%), Gaps = 38/227 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + + E A + K ++ ++ N ++E + ++ +K+ Sbjct: 846 LYQQMLKHNALFVGAEVGGAKSGIKGLNNKIMQLRKVCNHPFVFEEVEAV--LNSQKLTN 903 Query: 59 LEVI--------------IEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTL 94 + KA+ +++ + + Sbjct: 904 ELLWRTSGKFELLDRVLPKFKASGHRVLMFFQMTQIMDIMEDFLRLKDMKYMRLDGSTKA 963 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+ ++E+N + G GLNLQ + ++ F W+ + + Sbjct: 964 DERQDMLKEFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 1017 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ ++++E++L+R K I ++ A K Sbjct: 1018 QDRAHRIGQKNEVRILRLISNDSVEEMILERAHQKLEIDGKVIQAGK 1064 >gi|328724512|ref|XP_001948282.2| PREDICTED: hypothetical protein LOC100164870 [Acyrthosiphon pisum] Length = 4192 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 25/233 (10%), Positives = 70/233 (30%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + + L A N + ++ + + + + Sbjct: 1860 KYYRGILEKNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGAEDQIQYDYRNLNGD 1919 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K+ ++ ++ K N +++ L ++ + + Sbjct: 1920 DPDVYYKALIHSSGKMVLIDKLLPKLKDNGHRVLIFSQMVRCLDIIEDYLVYRKYPFERL 1979 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I + + + + G G+NL + ++ + W+ + Sbjct: 1980 DGRIRGNLRQAAIDRFCKPDSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2035 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V VY L+ +NT + + + K + +L ++ Sbjct: 2036 --DLQAQARCHRIGQQKMVKVYRLLCRNTYEREMFNKASLKLGLDKAILQSMN 2086 >gi|156043545|ref|XP_001588329.1| hypothetical protein SS1G_10776 [Sclerotinia sclerotiorum 1980] gi|154695163|gb|EDN94901.1| hypothetical protein SS1G_10776 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1086 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 76/224 (33%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + G+ + ++ + N + Sbjct: 430 VKWYKKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 489 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ K + +++ + L L+ G + Sbjct: 490 IFNAGKMVMLDKLLTRMKKAGSRVLIFSQMSRLLDILEDYCVFREFKYCRIDGGTAHEDR 549 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N+ + + G G+NL +I+V + W+ + + + R Sbjct: 550 IQAIDDYNKPGSEKFVFLLTTRAGGLGINLTS-ADIVVLYDSDWNPQA-----DLQAMDR 603 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY + +N I+E VL+R K + L++ + Sbjct: 604 AHRIGQTKQVVVYRFVTENAIEEKVLERAAQKLRLDQLVIQQGR 647 >gi|158296578|ref|XP_316961.4| AGAP008482-PA [Anopheles gambiae str. PEST] gi|157014777|gb|EAA12280.5| AGAP008482-PA [Anopheles gambiae str. PEST] Length = 4793 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 73/233 (31%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L A N + ++ + + + + Sbjct: 2102 KYYRGILEQNFSFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEDQIQYDYRQQHGE 2161 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 V K+ ++ ++ K AN +++ L L+ + + Sbjct: 2162 DAESYYKNLIVSSGKMVLIDKLLPKLRANGHRVLIFSQMVRCLDILEDYLMYKKYPFERI 2221 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2222 DGRIRGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2277 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V +Y L+ +NT + + + K + +L ++ Sbjct: 2278 --DLQAQARCHRIGQQKMVKIYRLLCRNTYEREMFDKASLKLGLDKAVLQSMN 2328 >gi|58270438|ref|XP_572375.1| transcription activator snf2l1 [Cryptococcus neoformans var. neoformans JEC21] gi|57228633|gb|AAW45068.1| transcription activator snf2l1, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1096 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 85/229 (37%), Gaps = 39/229 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYYDEEK-------- 46 + QR+ Y L ++I+A N + ++ + N +D + Sbjct: 451 EMQRKWYKSLLEKDIDAVNGMTGKKEGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPFTTD 510 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ ++ KA + +++ + L L+ Sbjct: 511 QHLVDNAGKMVILDKLLKSMKAKGSRVLIFSQMSRMLDILEDYCQFRGHQYCRIDGSTAH 570 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N + + + G G+NL +I+V F W+ + + Sbjct: 571 EDRIAAIDEYNAPESEKFVFLLTTRAGGLGINLVT-ADIVVLFDSDWNPQA-----DLQA 624 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G + V+V+ I Q+ ++E +L+R K + L++ + + Sbjct: 625 MDRAHRIGQTKQVYVFRFITQDAVEERILERATQKLKLDQLVIQEGRAQ 673 >gi|83764570|dbj|BAE54714.1| unnamed protein product [Aspergillus oryzae] Length = 1113 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 77/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 426 VKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 485 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 486 VYNAGKMSILDKLLARMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTTAHEDR 545 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + + + R Sbjct: 546 IAAIDEYNKPGSDKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDR 599 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 600 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 645 >gi|332021363|gb|EGI61737.1| Chromatin-remodeling complex ATPase chain Iswi [Acromyrmex echinatior] Length = 1007 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 83/233 (35%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ N A K ++ + N + Sbjct: 360 IKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPG 419 Query: 43 --DEEKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K +++ L L+ Sbjct: 420 PPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRMLDILEDYCHWRCFQYCRL 479 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I E+N + + G G+NL ++++ + W+ + Sbjct: 480 DGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 534 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G ++ V V+ I +NT++E +++R K + L++ + Sbjct: 535 -MDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGR 586 >gi|134117902|ref|XP_772332.1| hypothetical protein CNBL2000 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254945|gb|EAL17685.1| hypothetical protein CNBL2000 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1096 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 85/229 (37%), Gaps = 39/229 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYYDEEK-------- 46 + QR+ Y L ++I+A N + ++ + N +D + Sbjct: 451 EMQRKWYKSLLEKDIDAVNGMTGKKEGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPFTTD 510 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ ++ KA + +++ + L L+ Sbjct: 511 QHLVDNAGKMVILDKLLKSMKAKGSRVLIFSQMSRMLDILEDYCQFRGHQYCRIDGSTAH 570 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N + + + G G+NL +I+V F W+ + + Sbjct: 571 EDRIAAIDEYNAPESEKFVFLLTTRAGGLGINLVT-ADIVVLFDSDWNPQA-----DLQA 624 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G + V+V+ I Q+ ++E +L+R K + L++ + + Sbjct: 625 MDRAHRIGQTKQVYVFRFITQDAVEERILERATQKLKLDQLVIQEGRAQ 673 >gi|190348362|gb|EDK40804.2| hypothetical protein PGUG_04902 [Meyerozyma guilliermondii ATCC 6260] Length = 1034 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 78/228 (34%), Gaps = 39/228 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 + Q Y L ++I+A N + ++ + N + Sbjct: 363 EMQIRWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 422 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP----------QGRTL 94 + K+ L+ ++ + + +++ + L L+ Sbjct: 423 EHLAYNSGKMIILDKMLKKFREQGSRVLIFSQMSRLLDILEDYCYLRDYEYCRIDGSTAH 482 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I +N + + G G+NL +I++ + W+ + + Sbjct: 483 EDRIEAIDSYNAPDSDKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQA 536 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G K+ V VY + +N I+E VL+R K + L++ ++ Sbjct: 537 MDRAHRIGQKKQVHVYRFVTENAIEEKVLERAAQKLRLDQLVIQQGRQ 584 >gi|149633136|ref|XP_001511990.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1-like [Ornithorhynchus anatinus] Length = 819 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 75/216 (34%), Gaps = 33/216 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------EKHWKEVHD 53 MK F+RE+ G+ ++ N S+ + ++ Sbjct: 264 MKDLDAFEREM-----GKKVKLQNILSQ---LRKCVGHPYLFEGVEPEPFAIGDHLVEAS 315 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K+ L+ ++ A +++ L LQ ++ I Sbjct: 316 GKLHLLDKLLAFLYAGGHRVLLFSQMTRMLDVLQDYMDYRGYSYERLDGSVRGEERHLAI 375 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + + + + G G+NL + ++F ++ + + R + G Sbjct: 376 KNFGQQPVFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQATARVHRIGQ 429 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V + LI ++T++E++ + +K + + ++ Sbjct: 430 SKPVKIIRLIGRDTVEEIIYRTAVSKLRLTNAIMEG 465 >gi|313851062|ref|NP_001186586.1| putative DNA helicase INO80 complex homolog 1 [Gallus gallus] Length = 1560 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 69/171 (40%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ------- 90 +K K+ AL++++ K+ +++ + L++ Sbjct: 1091 FIRIPDKESLITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMR 1150 Query: 91 ----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1151 LDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT---- 1205 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1206 -VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1255 Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats. Identities = 16/145 (11%), Positives = 42/145 (28%), Gaps = 12/145 (8%) Query: 3 QYHKFQRE-LYCDLQGENI--------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH- 52 Y + + DL ++ + + ++ ++ N ++ ++ W H Sbjct: 775 LYQALKNKISIDDLLQSSMGTTQQAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHI 834 Query: 53 DEKIKALEVIIEKANAAPIIVAY--HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 K + I + + + L ++L +E + Sbjct: 835 SLKPYPISKFIYRHGQIRVFNHSRDRWLRVLLSPFAPDHIQQSLFHRKGINEESCFSFLR 894 Query: 111 LLFAHPASCGHGLNLQYGGNILVFF 135 + PA + +N + L F Sbjct: 895 FIDVSPAEMANLMNQGHLARWLALF 919 >gi|71033491|ref|XP_766387.1| hypothetical protein [Theileria parva strain Muguga] gi|68353344|gb|EAN34104.1| hypothetical protein TP01_0866 [Theileria parva] Length = 1816 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 78/220 (35%), Gaps = 27/220 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKE------VHDEKI 56 Y Y +L + + +S ++ ++ N E + + KI Sbjct: 1059 YKNILARNYEELARNSGGSRSSLQNICMELKKVCNHPFLCYEPEDRQVWLQGLIYGSGKI 1118 Query: 57 KALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEW 104 L+ +++ K +++ L + + + + + Sbjct: 1119 CLLDKLLQRLKEKGHRVLIFSQMVRMLNIISEYLTLRGFKHQRLDGTMGKEVRKKAMDHF 1178 Query: 105 NEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL + ++ + W+ + + R + G Sbjct: 1179 NDPQSDDFCFLLSTKAGGLGINLTS-ADTVIIYDSDWNPQN-----DLQAEARAHRIGQT 1232 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + V +Y L+ +++I++ +L+R +TK + L++ L K Sbjct: 1233 KTVQIYRLVTKDSIEQTILERAKTKMVLDALVVQGLNKRG 1272 >gi|153939497|ref|YP_001391002.1| Snf2/Rad54 family helicase [Clostridium botulinum F str. Langeland] gi|152935393|gb|ABS40891.1| helicase, SNF2/RAD54 family [Clostridium botulinum F str. Langeland] Length = 1077 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++E Y +++ S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIENY---EGSNGK 907 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 + L I+ I++ F S L D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ +E R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQASDRAHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|302684803|ref|XP_003032082.1| hypothetical protein SCHCODRAFT_67837 [Schizophyllum commune H4-8] gi|300105775|gb|EFI97179.1| hypothetical protein SCHCODRAFT_67837 [Schizophyllum commune H4-8] Length = 811 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 81/222 (36%), Gaps = 37/222 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEVH--------- 52 ++Q++ + + + + S ++ ++ + +D + Sbjct: 487 EEWQKQALGECDDFCSKKYRNLSLQNTVMQLRKVCSHPFLFDWPLDPETHAPVIDESLVH 546 Query: 53 -DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP------------QGRTLDKD 97 K+ LE ++++ +++ F L ++ Q L++ Sbjct: 547 ASGKMMVLERLLDELFRRKHKVLLFSQFTKMLDIIEDWAIEFKGWNLCRIDGQTPPLERR 606 Query: 98 PCTIQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + G P L + G G+NL + ++F+ W+ + ++ Sbjct: 607 AEMDRFQTGGDAPDAPCLFLLSTRAGGLGINLTA-ADTVIFYDQDWNPQ-----MDAQAQ 660 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V ++ L++ +TI+ ++QR K ++ L++ Sbjct: 661 DRAHRIGQTRPVLIFRLVSAHTIETKIMQRATEKRKLEALVI 702 >gi|121712712|ref|XP_001273967.1| RSC complex subunit (Sth1), putative [Aspergillus clavatus NRRL 1] gi|119402120|gb|EAW12541.1| RSC complex subunit (Sth1), putative [Aspergillus clavatus NRRL 1] Length = 1379 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + D +G ++ ++ +L N ++ + Sbjct: 786 KLYKQLVTHNKMVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEPVEDQMNPGRATNDL 845 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 846 IWRTAGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGLKYLRLDGSTKSDD 905 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 906 RSDLLKLFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQ-----DLQAQD 959 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 960 RAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1004 >gi|297296191|ref|XP_002804786.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Macaca mulatta] Length = 1478 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1005 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1064 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1065 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1123 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1124 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1173 >gi|312385188|gb|EFR29745.1| hypothetical protein AND_01060 [Anopheles darlingi] Length = 5373 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 73/233 (31%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L A N + ++ + + + + Sbjct: 1515 KYYRGILEQNFSFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDYRQQHGE 1574 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 V K+ ++ ++ K AN +++ L L+ + + Sbjct: 1575 DAEAYYKNLIVSSGKMVLIDKLLPKLRANGHRVLIFSQMVRCLDILEDYLMYKKYPFERI 1634 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 1635 DGRIRGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 1690 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V +Y L+ +NT + + + K + +L ++ Sbjct: 1691 --DLQAQARCHRIGQQKMVKIYRLLCRNTYEREMFDKASLKLGLDKAVLQSMN 1741 >gi|307179542|gb|EFN67856.1| ATP-dependent helicase brm [Camponotus floridanus] Length = 1996 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 70/232 (30%), Gaps = 43/232 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1426 LYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTP 1485 Query: 53 -------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 K + L+ I+ K +++ + ++ + Sbjct: 1486 GSNVITGPDLFRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLR 1545 Query: 96 --------KDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++++N+ + G GLNLQ + ++ F W+ + Sbjct: 1546 LDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ-- 1602 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 1603 ---DLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1651 >gi|322785850|gb|EFZ12469.1| hypothetical protein SINV_09102 [Solenopsis invicta] Length = 1963 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 70/232 (30%), Gaps = 43/232 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1393 LYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQ 1452 Query: 53 -------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 K + L+ I+ K +++ + ++ + Sbjct: 1453 GSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLR 1512 Query: 96 --------KDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++++N+ + G GLNLQ + ++ F W+ + Sbjct: 1513 LDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ-- 1569 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 1570 ---DLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1618 >gi|300123117|emb|CBK24124.2| unnamed protein product [Blastocystis hominis] Length = 1117 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 68/221 (30%), Gaps = 32/221 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y L+ E S + + N KE HD++ ++ Sbjct: 328 KYYRAIYDRNRAYLEYEGSSMAQLVSIVTELRKCCNHPFMIRGV-VAKETHDDRFLYQKL 386 Query: 62 IIE---------------KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 +++ +++ F + L L+ Sbjct: 387 LVQASGKFVLLSKLLPELHQEHHQVLIFSQFITTLDLLEDLLALLEFSFDRLDGSVRGDL 446 Query: 98 -PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N GK+ + G GLNL + ++ F W+ + + R Sbjct: 447 RQQKIDRFNSGKVFAFLLSTKAGGLGLNLTA-ADTVIIFDNDWNPQN-----DVQAEARA 500 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V V+ L+ + T +E + R K + + + Sbjct: 501 HRIGQQKPVQVFRLVTKGTYEEDLFSRASKKLGLSQAVFES 541 >gi|332025170|gb|EGI65350.1| ATP-dependent helicase brm [Acromyrmex echinatior] Length = 1953 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 70/232 (30%), Gaps = 43/232 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1383 LYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQ 1442 Query: 53 -------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 K + L+ I+ K +++ + ++ + Sbjct: 1443 GSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLR 1502 Query: 96 --------KDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++++N+ + G GLNLQ + ++ F W+ + Sbjct: 1503 LDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ-- 1559 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 1560 ---DLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1608 >gi|328699200|ref|XP_001946170.2| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like [Acyrthosiphon pisum] Length = 1051 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 87/233 (37%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ N A K ++ + +N + Sbjct: 390 VKVYVGLSKLQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRKCSNHPYLFDGVEPG 449 Query: 43 --DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + K+ + +++ K + ++V + L+ Sbjct: 450 PPYTTDEHIVFNCGKMVVFDKLLKALKEQDSRVLVFSQMTRMMDILEDYMHWKGYNYCRL 509 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I E+NE + S G G+NL ++++ + W+ + Sbjct: 510 DGQTPHEDRQRQINEYNEPNSKKFVFILSTRSGGLGINL-ATADVVIIYDSDWNPQ---- 564 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ LI +NT++E +++R K + L++ + Sbjct: 565 -MDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAEVKLRLDKLVIQQGR 616 >gi|302824179|ref|XP_002993735.1| hypothetical protein SELMODRAFT_187576 [Selaginella moellendorffii] gi|300138459|gb|EFJ05227.1| hypothetical protein SELMODRAFT_187576 [Selaginella moellendorffii] Length = 1827 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 81/254 (31%), Gaps = 60/254 (23%) Query: 1 MKQYHKF-----QRELYCDLQ---------GENIEAFNSASKTVKCLQLANGAVYYDEEK 46 +K Y KF ++ + ++ G + ++ + V + Sbjct: 1504 LKLYEKFAFSQAKKNVATMVEAYGGNADDRGNTSAPTHVFQALQYLRKVCSHPVLVLDGP 1563 Query: 47 HWKEVH-------------DEKIKALEVIIEKAN-------------AAPIIVAYHF--- 77 + V+ K+ AL I+E+ +++ Sbjct: 1564 LSENVNEENGSMDIHDIQNSPKLLALRDILEECGIGQCNGDNSTAGGQHRVLIFAQLKGF 1623 Query: 78 ----------NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 + + K ++ +N + I +L G GLNL Sbjct: 1624 LDIIEKDLFQTHMKSVTYMRLDGSVDVSKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLT 1683 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + +VF W+ + + R + G +R V V+ LI + T++E V+ R Sbjct: 1684 A-ADTVVFMEHDWNPMR-----DLQAMDRSHRLGQRRVVNVHRLIMRGTLEEKVMNLQRF 1737 Query: 187 KSTIQDLLLNALKK 200 K +I + ++NA Sbjct: 1738 KLSIANTVINADNA 1751 >gi|328793843|ref|XP_624270.3| PREDICTED: ATP-dependent helicase brm [Apis mellifera] Length = 2018 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 70/232 (30%), Gaps = 43/232 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1448 LYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQ 1507 Query: 53 -------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 K + L+ I+ K +++ + ++ + Sbjct: 1508 GSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLR 1567 Query: 96 --------KDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++++N+ + G GLNLQ + ++ F W+ + Sbjct: 1568 LDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ-- 1624 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 1625 ---DLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1673 >gi|320164565|gb|EFW41464.1| SNF2 family helicase [Capsaspora owczarzaki ATCC 30864] Length = 2959 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 73/178 (41%), Gaps = 11/178 (6%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 A ++A + +Q G + + + D + + +I + V F + Sbjct: 1382 NAMSAAFPDKRLIQYDCGKLQVLDT----LLRDLRAGGHKCLIFTQMTRVLDVLEQFLNF 1437 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + T+++ ++ +N + +I S G G+NL G + ++F+ W Sbjct: 1438 HGYVYLRLDGTTTIEQRQVLMERFNRDKRIFCFILSTRSGGVGVNLT-GADTVIFYDSDW 1496 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G R V +Y LI++ TI+E +L+R K + +++N Sbjct: 1497 NP-----VWDAQAQDRAHRIGQTRDVHIYRLISERTIEENILRRANQKRLLDSMVIND 1549 >gi|225678310|gb|EEH16594.1| helicase SWR1 [Paracoccidioides brasiliensis Pb03] Length = 1611 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 57/144 (39%), Gaps = 7/144 (4%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 K+ L+ ++ + V +F D + D+ + +I + Sbjct: 1327 DSGKLAKLDELLRELKNGGHRVLLYFQMD-PHDRSDGGIPHLEDRRDTVLDFQQRPEIFV 1385 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+NL + ++F+ W+ I+ + R + G R V VY LI Sbjct: 1386 FLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRLGQTRQVTVYRLI 1439 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 + TI+E + +R K +Q +++ Sbjct: 1440 TRGTIEERIRKRALQKEEVQRVVI 1463 >gi|328785433|ref|XP_396195.3| PREDICTED: chromatin-remodeling complex ATPase chain Iswi isoform 1 [Apis mellifera] Length = 959 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 83/233 (35%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ N A K ++ + N + Sbjct: 361 IKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPG 420 Query: 43 --DEEKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ-------- 90 + K+ L+ ++ K +++ L L+ Sbjct: 421 PPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRMLDILEDYCHWRGFQYCRL 480 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I E+N + + G G+NL ++++ + W+ + Sbjct: 481 DGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 535 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G ++ V V+ I +NT++E +++R K + L++ + Sbjct: 536 -MDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGR 587 >gi|168019640|ref|XP_001762352.1| chromatin remodeling complex SWI/SNF protein [Physcomitrella patens subsp. patens] gi|162686430|gb|EDQ72819.1| chromatin remodeling complex SWI/SNF protein [Physcomitrella patens subsp. patens] Length = 1289 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 80/215 (37%), Gaps = 27/215 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DEKI 56 Y + L ++ + ++ + N + E + ++ + K Sbjct: 800 YKQIMESGRVGLDIGTGKSRGLLNTAMQLRKCCNHPYLFLEGRDYEPENRDELIRSSGKF 859 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEW 104 + L+ ++ K +++ + L+ ++ +Q++ Sbjct: 860 ELLDRLLPKLAKTGHRVLLFSQMTRLMDILEDYLEWHGFKFLRLDGTTKTEERGTLLQKF 919 Query: 105 NEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N P + G GLNLQ + ++ F W+ + +++ R + G K Sbjct: 920 NAPDSPYFMFLLSTRAGGLGLNLQT-ADTVILFDSDWNPQ-----MDQQAEDRAHRIGQK 973 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ L++ +I+E +L+R ++K I ++ A Sbjct: 974 KEVRVFVLVSVGSIEEEILERAKSKMGIDAKVIQA 1008 >gi|328771548|gb|EGF81588.1| hypothetical protein BATDEDRAFT_183 [Batrachochytrium dendrobatidis JAM81] Length = 1186 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 78/224 (34%), Gaps = 34/224 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 ++ Y + + G+ + ++ ++ N +D+ + Sbjct: 650 LRLYEQIRHRR---FGGDGFSKKKVLNNLIMQFRKICNHPFVFDQVEELINPSKGTNDTL 706 Query: 55 -----KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 K + L+ I+ K + I++ + + ++ ++ Sbjct: 707 FRVAGKFELLDRILPKFKVSGHRILMFFQMTQVMDIMEDYLRWRGHIYLRLDGHTKPEER 766 Query: 98 PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +N + + + G GLNLQ + ++ + W+ + + R Sbjct: 767 TVMLKTFNRPDDPPFIFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQDR 820 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V + LI +++E +L R + K I ++ A K Sbjct: 821 AHRIGQKKEVRILRLITSKSVEETILARAQYKLDIDGKVIQAGK 864 >gi|116201585|ref|XP_001226604.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88177195|gb|EAQ84663.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 1125 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 74/224 (33%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + G+ + ++ + N + Sbjct: 426 VKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 485 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 486 VYNAGKMIVLDKLLKRMQKQGSRVLIFSQMSRLLDILEDYCVFRQYKYCRIDGSTAHEDR 545 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N+ + + G G+NL +I+V + W+ + + + R Sbjct: 546 IAAIDDYNKPDSEKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDR 599 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY + N I+E VL+R K + L++ + Sbjct: 600 AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQQGR 643 >gi|224044013|ref|XP_002188531.1| PREDICTED: chromodomain helicase DNA binding protein 1-like [Taeniopygia guttata] Length = 888 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 71/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + ++ + + E Sbjct: 278 KYYKAILTKDLDAFENETGRKVTLQNVLIQLRKCVAHPYLFSGVEPEPFEIGDHIVEASG 337 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ A +++ L LQ ++ I+ Sbjct: 338 KMCLLDKLLSFLYAGGHRVLLFSQMTQLLDILQDYMDYRGYSYERLDGSVRGEERHLAIK 397 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + + R + G Sbjct: 398 NFGQQPIFIFLLSTRAGGVGMNLTA-ADTVIFTDSDFNPQN-----DLQAIARAHRIGQH 451 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V + LI ++T++E++ +R +K + + ++ Sbjct: 452 KPVKIIRLIGRDTVEEIIYRRAASKLRLTNAIVEG 486 >gi|301776989|ref|XP_002923917.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Ailuropoda melanoleuca] Length = 1948 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 63/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYH-KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y R + + + + N + + Sbjct: 957 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 1016 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1017 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1076 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1077 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1130 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1131 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1172 >gi|170760693|ref|YP_001787071.1| Snf2/Rad54 family helicase [Clostridium botulinum A3 str. Loch Maree] gi|169407682|gb|ACA56093.1| helicase, SNF2/RAD54 family [Clostridium botulinum A3 str. Loch Maree] Length = 1077 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 77/213 (36%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++E Y +++ S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIENY---EGSNGK 907 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 + L I+ I++ F S L D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNINYLYLDGSTKADVRGNLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ +E R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQASDRAHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V + LIA+ TI+E + + + K I D +++ Sbjct: 1022 TVEIIRLIAKGTIEEKIYKIQQKKKEIIDKVID 1054 >gi|169612371|ref|XP_001799603.1| hypothetical protein SNOG_09308 [Phaeosphaeria nodorum SN15] gi|160702496|gb|EAT83500.2| hypothetical protein SNOG_09308 [Phaeosphaeria nodorum SN15] Length = 1333 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 77/219 (35%), Gaps = 35/219 (15%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DE 54 + ++++ DL ++ +A +S +L N +++ + Sbjct: 774 RRLKKDVEKDLPDKDPKAASS-----SLRKLCNHPFVFEQVEEVMNPTKSTNDLLWRASG 828 Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQ 102 K + L+ I+ + +++ + + D ++ Sbjct: 829 KFELLDRILPKFEKTGHRVLMFFQMTQIMNIMEDYLRLRGMKYMRLDGATKADDRSELLK 888 Query: 103 EWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N P + G GLNLQ + ++ + W+ + + R + G Sbjct: 889 EFNAPNSPYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQDRAHRIG 942 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V + LI N+++E +L+R K + ++ A K Sbjct: 943 QKNEVRILRLITSNSVEEKILERANYKLDMDGKVIQAGK 981 >gi|291405109|ref|XP_002719030.1| PREDICTED: chromodomain helicase DNA binding protein 3-like [Oryctolagus cuniculus] Length = 1910 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 989 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1048 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1049 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1108 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1109 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1162 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1163 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1204 >gi|293347835|ref|XP_002726667.1| PREDICTED: chromodomain helicase DNA binding protein 5 [Rattus norvegicus] Length = 1927 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 63/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYH-KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y R + + + + N + + Sbjct: 932 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGS 991 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 992 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1051 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1052 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1105 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1106 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1147 >gi|322787688|gb|EFZ13700.1| hypothetical protein SINV_08345 [Solenopsis invicta] Length = 1008 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 83/233 (35%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ N A K ++ + N + Sbjct: 361 IKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPG 420 Query: 43 --DEEKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K +++ L L+ Sbjct: 421 PPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRMLDILEDYCHWRCFQYCRL 480 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I E+N + + G G+NL ++++ + W+ + Sbjct: 481 DGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 535 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G ++ V V+ I +NT++E +++R K + L++ + Sbjct: 536 -MDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGR 587 >gi|307191525|gb|EFN75028.1| Chromatin-remodeling complex ATPase chain Iswi [Camponotus floridanus] Length = 1010 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 83/233 (35%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ N A K ++ + N + Sbjct: 362 IKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPG 421 Query: 43 --DEEKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K +++ L L+ Sbjct: 422 PPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRMLDILEDYCHWRCFQYCRL 481 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I E+N + + G G+NL ++++ + W+ + Sbjct: 482 DGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 536 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G ++ V V+ I +NT++E +++R K + L++ + Sbjct: 537 -MDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGR 588 >gi|195398201|ref|XP_002057711.1| GJ18280 [Drosophila virilis] gi|292630877|sp|B4M9A8|RAD54_DROVI RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|194141365|gb|EDW57784.1| GJ18280 [Drosophila virilis] Length = 786 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 74/236 (31%), Gaps = 47/236 (19%) Query: 1 MKQYHKF-----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--- 52 ++ Y F R D + + + +L N E+ +E Sbjct: 416 LQLYTNFLKSDQVRRSLADCTDK--TTLTALADITTLKKLCNHPDLIYEKIAAREKGFEN 473 Query: 53 ------------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----- 86 K L+ ++ + +++ ++ L ++ Sbjct: 474 SQNVLPPNYKPKDVNPELSGKFMLLDFMLAAIRANSDDKVVLISNYTQTLDLFEQLARKR 533 Query: 87 -----AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWD 140 T+ K + +N+ +S G L G N L F W+ Sbjct: 534 KYSYVRLDGTMTIKKRSKVVDRFNDPATDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWN 593 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 594 PAN-----DEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSSIID 644 >gi|219120392|ref|XP_002180935.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407651|gb|EEC47587.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 970 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 74/222 (33%), Gaps = 30/222 (13%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY--------DEEKHWKEV 51 + Y K + G+ + ++ + + D Sbjct: 392 QLYKKLLLRDLDSITGKVSGKNRTAVLNIVMQLRKCCGHPYLFEGVEDRTLDPLGEHLVE 451 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPC 99 + K+ ++ ++++ + +++ D Sbjct: 452 NCGKLSMVDKLLKRLKSRGSRVLIFTQMTRVLDILEDFMVMRGYQYCRIDGNTNYDDRES 511 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I E+N + G G+NLQ + + + W+ ++ + R Sbjct: 512 SIDEFNREGTDKFCFLLSTRAGGLGINLQT-ADTCILYDSDWNPQQ-----DLQAQDRCH 565 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ L+++NT++E +++R + K + +++ + Sbjct: 566 RLGQKKPVNVFRLVSENTVEEKIVERAQQKLKLDAMVVQQGR 607 >gi|161784309|sp|Q872I5|INO80_NEUCR RecName: Full=Putative DNA helicase ino-80 Length = 1997 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 59/157 (37%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + N +++ + + +++ + Sbjct: 1696 DSGKLAKLDELLRELKENGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1755 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1756 TVADFQTRPEIFIFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1809 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1810 LGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1846 >gi|302822093|ref|XP_002992706.1| hypothetical protein SELMODRAFT_186944 [Selaginella moellendorffii] gi|300139447|gb|EFJ06187.1| hypothetical protein SELMODRAFT_186944 [Selaginella moellendorffii] Length = 1825 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 81/254 (31%), Gaps = 60/254 (23%) Query: 1 MKQYHKF-----QRELYCDLQ---------GENIEAFNSASKTVKCLQLANGAVYYDEEK 46 +K Y KF ++ + ++ G + ++ + V + Sbjct: 1502 LKLYEKFAFSQAKKNVATMVEAYGGNADDRGNTSAPTHVFQALQYLRKVCSHPVLVLDGP 1561 Query: 47 HWKEVH-------------DEKIKALEVIIEKAN-------------AAPIIVAYHF--- 77 + V+ K+ AL I+E+ +++ Sbjct: 1562 LSENVNEENGSMDIHDIQNSPKLLALRDILEECGIGQCNGDNSTAGGQHRVLIFAQLKGF 1621 Query: 78 ----------NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 + + K ++ +N + I +L G GLNL Sbjct: 1622 LDIIEKDLFQTHMKSVTYMRLDGSVDVSKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLT 1681 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + +VF W+ + + R + G +R V V+ LI + T++E V+ R Sbjct: 1682 A-ADTVVFMEHDWNPMR-----DLQAMDRSHRLGQRRVVNVHRLIMRGTLEEKVMNLQRF 1735 Query: 187 KSTIQDLLLNALKK 200 K +I + ++NA Sbjct: 1736 KLSIANTVINADNA 1749 >gi|289616366|emb|CBI56893.1| unnamed protein product [Sordaria macrospora] Length = 2008 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 59/157 (37%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + N +++ + + +++ + Sbjct: 1706 DSGKLAKLDELLRELKENGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1765 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1766 TVADFQTRPEIFIFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1819 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1820 LGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1856 >gi|224003427|ref|XP_002291385.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973161|gb|EED91492.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 352 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 73/219 (33%), Gaps = 31/219 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKE------- 50 MK+ R + + +S ++ ++ +D + + Sbjct: 134 MKEIDSIVRLSEAENNPDAEAGRSSVVLRNLVMQLRKICLHPYLFDFAESDIKSTTLEEL 193 Query: 51 -VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKD 97 K+ L+ ++ N + F S L F G + Sbjct: 194 IATSGKLAVLDKLLISLFKNGNRTCIFSQFTSMLNILEDYCVLRGWKYVRFDGGTPRAQR 253 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N + S G G+NLQ + + + W+ + + + R Sbjct: 254 NHIINQFNAPGSKDFIFLMSTKSGGLGINLQT-ADTCILYDSDWNPQ-----PDLQAMAR 307 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G K+ V VY L++ TI+E V++R K + ++ Sbjct: 308 VHRIGQKKVVHVYRLLSAGTIEERVVERAEKKLYLDKMV 346 >gi|150865273|ref|XP_001384421.2| component of SWI/SNF global transcription activator complex [Scheffersomyces stipitis CBS 6054] gi|149386529|gb|ABN66392.2| component of SWI/SNF global transcription activator complex [Scheffersomyces stipitis CBS 6054] Length = 1566 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 36/228 (15%) Query: 2 KQYHKFQRELYCDLQGEN------IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--- 52 K Y + N + N+ ++ ++ ++ N Y+E ++ Sbjct: 922 KLYQLMLKYNILYASDPNGPSDVPLIIKNANNQIMQLRKICNHPFVYEEVENLINPTIET 981 Query: 53 -------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA----------RLQKAFPQGRT 93 K + L+ I+ K +++ + + G Sbjct: 982 SDIIWRVGGKFELLDKILPKFKTTGHRVLIFFQMTQIMDIMEDFLRLRGMKYMRLDGGTK 1041 Query: 94 LDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D ++ +N + G GLNLQ + +V F W+ + + Sbjct: 1042 ADDRTALLKLFNAPDSDYFCFLLSTRAGGLGLNLQT-ADTVVIFDTDWNPHQ-----DLQ 1095 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++++E++L+R K I ++ A K Sbjct: 1096 AQDRAHRIGQKNEVRILRLITEDSVEEMILERAHAKLEIDGKVIQAGK 1143 >gi|148544262|ref|YP_001271632.1| helicase domain-containing protein [Lactobacillus reuteri DSM 20016] gi|148531296|gb|ABQ83295.1| helicase domain protein [Lactobacillus reuteri DSM 20016] Length = 291 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 27/213 (12%) Query: 3 QYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + L +Q + ++ + +L D KIK Sbjct: 70 LYQARAQRLIRQIQKQNDEEFQQNKLAVLAEITRLRELCCSPQLLDRGYS---GPSGKIK 126 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 A +I+ + I++ F S LA + + E+N Sbjct: 127 ATMNLIKDEMADNHKILLFSQFTSALAILKEKLANAGIKYFVIEGKTKKEDRLQFVDEFN 186 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + + G GLNL ++++ F WW++ E R + G K Sbjct: 187 SYDQPAVFLISLKAGGTGLNLTS-ADVVIHFDPWWNIAA-----ENQATDRAHRIGQKNN 240 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y +IAQNTI+E +++ + K+ + + +L+ Sbjct: 241 VTIYKMIAQNTIEEKIVEMQQKKAALANSILSG 273 >gi|170034569|ref|XP_001845146.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus] gi|167875927|gb|EDS39310.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus] Length = 5423 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 73/233 (31%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L A N + ++ + + + + Sbjct: 2406 KYYRGILEQNFSFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEDQIQYDYRMQHGE 2465 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 V K+ ++ ++ K AN +++ L L+ + + Sbjct: 2466 DAEAYYKNLVVSSGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLIYRKYPFERI 2525 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2526 DGRIRGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2581 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V +Y L+ +NT + + + K + +L ++ Sbjct: 2582 --DLQAQARCHRIGQQKMVKIYRLLCRNTYEREMFDKASMKLGLDKAILQSMN 2632 >gi|302653548|ref|XP_003018598.1| hypothetical protein TRV_07389 [Trichophyton verrucosum HKI 0517] gi|291182255|gb|EFE37953.1| hypothetical protein TRV_07389 [Trichophyton verrucosum HKI 0517] Length = 1104 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 75/226 (33%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 422 VKWYQKILEKDIDAVNGAQGNRESKTRLLNVVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 481 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 482 IDNSGKMVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDR 541 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ F W+ + + + R Sbjct: 542 IQAIDEYNRPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQA-----DLQAMDR 595 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 596 AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 641 >gi|294658800|ref|XP_461131.2| DEHA2F17732p [Debaryomyces hansenii CBS767] gi|202953393|emb|CAG89514.2| DEHA2F17732p [Debaryomyces hansenii] Length = 1295 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 76/225 (33%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y + + + + A + K ++ ++ N ++E + Sbjct: 764 LYQQMLKHNALFVGVDVGGAKSGIKGLNNKIMQLRKICNHPFVFEEVETVLNSTRLTNDL 823 Query: 53 ----DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ ++ K + +++ + + ++ Sbjct: 824 IWRVSGKFELLDRVLPKFKASGHRVLIFFQMTQVMNIMEDFLRWRDMKYLRLDGATKAED 883 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++++N + G GLNLQ + ++ F W+ + + Sbjct: 884 RQDMLKDFNAPNSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 937 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 938 RAHRIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKVIQAGK 982 >gi|281343214|gb|EFB18798.1| hypothetical protein PANDA_010098 [Ailuropoda melanoleuca] Length = 1318 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 311 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 370 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ I+ K +++ L L+ + Sbjct: 371 ALIKASGKLMLLQKILRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 430 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 431 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 484 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 485 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 526 >gi|158420731|ref|NP_001005271.2| chromodomain-helicase-DNA-binding protein 3 isoform 3 [Homo sapiens] Length = 2059 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 1053 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1112 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1113 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1172 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1173 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1226 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1227 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1268 >gi|327269727|ref|XP_003219644.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Anolis carolinensis] Length = 3008 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 74/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHD- 53 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 1209 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNP 1268 Query: 54 --------------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 1269 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 1328 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I ++ + + G G+NL + + F W+ + Sbjct: 1329 IDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1385 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1386 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1438 >gi|315054985|ref|XP_003176867.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum CBS 118893] gi|311338713|gb|EFQ97915.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum CBS 118893] Length = 1114 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 75/226 (33%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 431 VKWYQKILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 490 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 491 IDNSGKMVILDKLLTRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDR 550 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ F W+ + + + R Sbjct: 551 IQAIDEYNRPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQA-----DLQAMDR 604 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 605 AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 650 >gi|311251314|ref|XP_003124552.1| PREDICTED: LOW QUALITY PROTEIN: helicase SRCAP-like [Sus scrofa] Length = 3227 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 2017 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2076 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2077 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2135 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2136 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2189 >gi|309268993|ref|XP_003084784.1| PREDICTED: helicase SRCAP [Mus musculus] gi|309268995|ref|XP_001480453.2| PREDICTED: helicase SRCAP isoform 1 [Mus musculus] Length = 3237 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 2021 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2080 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2081 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2139 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2140 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2193 >gi|309266116|ref|XP_003086692.1| PREDICTED: LOW QUALITY PROTEIN: helicase SRCAP [Mus musculus] Length = 3231 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 2021 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2080 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2081 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2139 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2140 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2193 >gi|301778809|ref|XP_002924810.1| PREDICTED: helicase SRCAP-like [Ailuropoda melanoleuca] Length = 3243 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 2032 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2091 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2092 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2150 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2151 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2204 >gi|297698573|ref|XP_002826392.1| PREDICTED: LOW QUALITY PROTEIN: helicase SRCAP-like [Pongo abelii] Length = 3230 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 2021 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2080 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2081 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2139 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2140 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2193 >gi|297283843|ref|XP_002802498.1| PREDICTED: helicase SRCAP-like [Macaca mulatta] Length = 3071 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 1977 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2036 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2037 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2095 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2096 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2149 >gi|293356219|ref|XP_341933.4| PREDICTED: Snf2-related CBP activator protein [Rattus norvegicus] Length = 3198 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 1998 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2057 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2058 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2116 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2117 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2170 >gi|293344407|ref|XP_001080260.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5-like [Rattus norvegicus] Length = 3212 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 2012 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2071 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2072 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2130 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2131 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2184 >gi|291411041|ref|XP_002721806.1| PREDICTED: Snf2-related CBP activator protein [Oryctolagus cuniculus] Length = 3217 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 2005 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2064 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2065 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2123 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2124 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2177 >gi|281352714|gb|EFB28298.1| hypothetical protein PANDA_014226 [Ailuropoda melanoleuca] Length = 3225 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 2014 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2073 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2074 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2132 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2133 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2186 >gi|194219024|ref|XP_001501219.2| PREDICTED: similar to Snf2-related CBP activator protein [Equus caballus] Length = 3228 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 2029 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2088 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2089 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2147 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2148 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2201 >gi|166796215|gb|AAI59100.1| SRCAP protein [Homo sapiens] gi|168272948|dbj|BAG10313.1| Snf2-related CBP activator protein [synthetic construct] Length = 3049 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 1840 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 1899 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 1900 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 1958 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 1959 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2012 >gi|149067720|gb|EDM17272.1| rCG39385, isoform CRA_a [Rattus norvegicus] Length = 1594 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 546 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 605 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 606 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 664 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 665 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 718 >gi|148685599|gb|EDL17546.1| mCG142078, isoform CRA_a [Mus musculus] Length = 2617 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 1564 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 1623 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 1624 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 1682 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 1683 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 1736 >gi|146219843|ref|NP_006653.2| helicase SRCAP [Homo sapiens] gi|296452947|sp|Q6ZRS2|SRCAP_HUMAN RecName: Full=Helicase SRCAP; AltName: Full=Domino homolog 2; AltName: Full=Snf2-related CBP activator gi|225000510|gb|AAI72428.1| Snf2-related CREBBP activator protein [synthetic construct] Length = 3230 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 2021 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2080 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2081 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2139 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2140 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2193 >gi|119572598|gb|EAW52213.1| Snf2-related CBP activator protein, isoform CRA_b [Homo sapiens] Length = 3168 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 1959 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2018 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2019 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2077 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2078 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2131 >gi|119572599|gb|EAW52214.1| Snf2-related CBP activator protein, isoform CRA_c [Homo sapiens] Length = 3131 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 1922 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 1981 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 1982 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2040 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2041 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2094 >gi|34535199|dbj|BAC87237.1| unnamed protein product [Homo sapiens] Length = 2427 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 2021 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 2080 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 2081 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2139 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2140 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2193 >gi|12654665|gb|AAH01171.1|AAH01171 Unknown (protein for IMAGE:3355762) [Homo sapiens] Length = 896 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 287 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 346 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 347 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 406 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 407 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 460 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 461 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 495 >gi|162318864|gb|AAI56473.1| Chromodomain helicase DNA binding protein 3 [synthetic construct] Length = 2045 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 1039 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1098 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1099 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1158 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1159 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1212 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1213 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1254 >gi|73958382|ref|XP_536900.2| PREDICTED: similar to Snf2-related CBP activator protein [Canis familiaris] Length = 3104 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 1898 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 1957 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 1958 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 2016 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2017 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2070 >gi|5106572|gb|AAD39760.1|AF143946_1 transcriptional activator SRCAP [Homo sapiens] Length = 2971 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 1762 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 1821 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 1822 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 1880 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 1881 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 1934 >gi|34327954|dbj|BAA20768.2| KIAA0309 [Homo sapiens] Length = 3053 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ + A +++ L L++ Sbjct: 1844 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLT 1903 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + +VF+ Sbjct: 1904 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVVFYDSD 1962 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 1963 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2016 >gi|114556131|ref|XP_513146.2| PREDICTED: RAD54-like protein [Pan troglodytes] Length = 901 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 83/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L + + +S T +L N ++ +E Sbjct: 576 ELYKRFLRQAKPAEELLEGKMSVSSLSSITS-LKKLCNHPALIHDKCVEEEDGFVGALDL 634 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFP------ 89 K+ L+ I+ ++ +++ ++ L +K Sbjct: 635 FPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY 694 Query: 90 ----QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 695 VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 753 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 754 -----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 802 >gi|291001481|ref|XP_002683307.1| chromodomain helicase DNA binding protein [Naegleria gruberi] gi|284096936|gb|EFC50563.1| chromodomain helicase DNA binding protein [Naegleria gruberi] Length = 1800 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/227 (12%), Positives = 73/227 (32%), Gaps = 37/227 (16%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-------------YDE 44 K Y + RE ++ + ++ ++ N E Sbjct: 608 KAYEQAIFKRNREFLMKGVSKSQNVPKLNNVLMELRKVCNHPFLISGAEENITRGMSDVE 667 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ-KAFPQGRTLDK----- 96 K+ ++ ++ K +++ L L+ + T + Sbjct: 668 VNEALIKSSSKMILVDKLLRKLREGGHKVLIFSQMVLVLNILEDYMRYRNFTYVRLDGTI 727 Query: 97 ----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I +N+ I + + G G+NL + ++ + W+ + + Sbjct: 728 KGSIRQQAIDRFNDPNIDTFVFLVSTKAGGVGINLTS-ADTVIIYDSDWNPQN-----DL 781 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V +Y L+ +NT ++ + +R K + +L++ Sbjct: 782 QAQARCHRIGQTKEVKIYRLLTKNTKEKEIFERASMKLGLDRAVLSS 828 >gi|115389802|ref|XP_001212406.1| chromatin remodelling complex ATPase chain ISW1 [Aspergillus terreus NIH2624] gi|114194802|gb|EAU36502.1| chromatin remodelling complex ATPase chain ISW1 [Aspergillus terreus NIH2624] Length = 1119 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 76/226 (33%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 432 VKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 491 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 492 VYNAGKMVILDKLLSRMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTTAHEDR 551 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N + + G G+NL +I+V + W+ + + + R Sbjct: 552 IAAIDDYNRPGSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDR 605 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 606 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 651 >gi|124487025|ref|NP_001074845.1| chromodomain helicase DNA binding protein 5 isoform1 [Mus musculus] Length = 1952 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 63/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYH-KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y R + + + + N + + Sbjct: 960 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 1019 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1020 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1079 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1080 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1133 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1134 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1175 >gi|237716743|ref|ZP_04547224.1| Snf2 family helicase [Bacteroides sp. D1] gi|262405519|ref|ZP_06082069.1| Snf2 family helicase [Bacteroides sp. 2_1_22] gi|294646342|ref|ZP_06723989.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294806677|ref|ZP_06765508.1| SNF2 family N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229442726|gb|EEO48517.1| Snf2 family helicase [Bacteroides sp. D1] gi|262356394|gb|EEZ05484.1| Snf2 family helicase [Bacteroides sp. 2_1_22] gi|292638297|gb|EFF56668.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294446097|gb|EFG14733.1| SNF2 family N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 946 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 64/206 (31%), Gaps = 21/206 (10%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + L L F+ + ++ QL+ + +I Sbjct: 730 YEQEKNSLRNILLQHPQSTNRLHSFSVLNGILRLRQLSCHPQLILPDYTGTSGKTAQIIE 789 Query: 59 LEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + ++ +++ F L + A G T ++ + + Sbjct: 790 TFDTL-QSEGHKVLIFSSFVRHLEVLAEAFRERGWKYALLTGATNNRPSEIAHFTEQKDV 848 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL + + WW+ E + R + G + V Y Sbjct: 849 QAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAYR 902 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I QN+I+E +L K + + + Sbjct: 903 FITQNSIEEKILHLQDEKRKLAETFV 928 >gi|84998372|ref|XP_953907.1| SNF2-family protein (chromodomain-helicase-DNA-binding protein 1 ) [Theileria annulata] gi|65304905|emb|CAI73230.1| SNF2-family protein (chromodomain-helicase-DNA-binding protein 1 homologue), putative [Theileria annulata] Length = 1816 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 80/223 (35%), Gaps = 27/223 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKE------VHD 53 ++ Y Y +L + + +S ++ ++ N E + + Sbjct: 1055 IEWYKNILARNYEELARNSGGSRSSLQNICMELKKVCNHPFLCYEPEDRQVWLQGLIYGS 1114 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 KI L+ +++ K +++ L + + + + Sbjct: 1115 GKICLLDKLLQRLKEKGHRVLIFSQMVRMLNIISEYLTLRGFKHQRLDGTMGKEVRKKAM 1174 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N+ + + G G+NL + ++ + W+ + + R + Sbjct: 1175 DHFNDPQSDDFCFLLSTKAGGLGINLTS-ADTVIIYDSDWNPQN-----DLQAEARAHRI 1228 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G + V +Y L+ +++I++ +L+R +TK + L++ L K Sbjct: 1229 GQTKTVQIYRLVTKDSIEQTILERAKTKMVLDALVVQGLNKRG 1271 >gi|241952923|ref|XP_002419183.1| ATP-dependent helicase, putative; chromatin structure-remodeling complex protein, putative; nuclear protein Sth1/Nps1 homologue, putative [Candida dubliniensis CD36] gi|223642523|emb|CAX42772.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 1300 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 77/225 (34%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y + + + + A + K ++ ++ N ++E + Sbjct: 750 LYQQMLKHNALFVGADVGGAKSGIKGLNNKIMQLRKICNHPFVFEEVESVLNSSRLTNDL 809 Query: 53 ----DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ ++ K + +++ + + ++ D+ Sbjct: 810 IWRVSGKFELLDRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWRDMKYLRLDGSTKADE 869 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 870 RQDMLKVFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQD 923 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 924 RAHRIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKVIQAGK 968 >gi|66826589|ref|XP_646649.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60474939|gb|EAL72876.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 3247 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 78/220 (35%), Gaps = 30/220 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-SASKTVK-----CLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + L N +K +K ++ N + ++++ + + + Sbjct: 1964 KMYDLIKTKGVSKLASSGGADGNPKLAKGLKNTYVQLRKICNHPYLFYDDEYNIDDNLIR 2023 Query: 56 IKALEVIIE------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 +++ KA +++ + L+ F D+ Sbjct: 2024 YAGKFDLLDRLLPKLKAAGHRVLIFSQMTQLINILEVFFAYKDYKFLRLDGSTKSDERGH 2083 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ +N + + G GLNLQ + ++ F W+ + ++ R Sbjct: 2084 LLELFNAPNSEYFIFVLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDLQAQDRAH 2137 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V V L+ ++++E +L R K + ++ A Sbjct: 2138 RIGQKQTVRVLRLVTAHSVEESILARANFKKELDKKIIQA 2177 >gi|219121827|ref|XP_002181260.1| imitation switch isoform 1, alias nucleosome remodeling factor 140 kDa subunit [Phaeodactylum tricornutum CCAP 1055/1] gi|217407246|gb|EEC47183.1| imitation switch isoform 1, alias nucleosome remodeling factor 140 kDa subunit [Phaeodactylum tricornutum CCAP 1055/1] Length = 1023 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 27/232 (11%), Positives = 76/232 (32%), Gaps = 40/232 (17%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNSA---------SKTVKCLQLANGAVYY------- 42 K Y K Q+E Y ++ N + ++ ++ N + Sbjct: 386 KLYIGLTKMQQEWYVRCLQKDAHELNKLGGPDRNRLLNVLMQLRKVCNHPYLFDGAEQGP 445 Query: 43 -DEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFP 89 + + K++ + ++ K + +++ L Sbjct: 446 PYIDGPHLWENSGKMQLMHKLLPKLQAKGSRVLIFCQMTRVLDILEDYFRLTKLEYCRID 505 Query: 90 QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ + E+N + G G+NL +I++ + W+ + Sbjct: 506 GNTDGERRDSQMDEFNAEGSSKFAFLLSTRAGGLGINL-ATADIVILYDSDWNPQ----- 559 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ + + T++E +++R K + ++ + Sbjct: 560 VDLQAMDRAHRIGQTKPVQVFRFVTEGTVEEKIIERADRKLFLDAAVIQQGR 611 >gi|3298562|gb|AAC39923.1| zinc-finger helicase [Homo sapiens] Length = 2000 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 994 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1053 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1054 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1113 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1114 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1167 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1168 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1209 >gi|308160430|gb|EFO62921.1| Chromodomain helicase-DNA-binding protein, putative [Giardia lamblia P15] Length = 2647 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 77/219 (35%), Gaps = 27/219 (12%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW------KEVHDEKIKALE 60 + Y L ++ + + ++ ++ N + K K + L+ Sbjct: 1538 LLEQNYEMLTAKSYNSVKLQNLLMQLRKVCNHPYIIHDLKLHTASLRDIVDGSGKFQVLD 1597 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK 108 +++K N +++ L L++ T ++ I +NE Sbjct: 1598 KLLDKLNSEGHRVLIFSQLIKTLDILERYCFYKKYKFQRLQGSMTSEQRRRAINNFNEKN 1657 Query: 109 IP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + S G G+NL + ++ F ++ + R + G + V Sbjct: 1658 SKDFIFLLSTRSGGQGINL-ATADTVIIFDADYNP-----HNDLQAAGRVHRIGQSKPVT 1711 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +Y L+ +++++E +L K + ++ K E+ ++ Sbjct: 1712 IYRLVTRDSVEERILDIGHRKLMLDYAIIQK-KNESTNL 1749 >gi|261197291|ref|XP_002625048.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces dermatitidis SLH14081] gi|239595678|gb|EEQ78259.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces dermatitidis SLH14081] Length = 1129 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 436 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 495 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKD 97 + K+ L+ I+ K + +++ + L + Sbjct: 496 IDNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQYCRIDGSTAHEDR 555 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ + W+ + + + R Sbjct: 556 IAAIDEYNRPGSEKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 609 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 610 AHRIGQTKQVIVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 655 >gi|194375514|dbj|BAG56702.1| unnamed protein product [Homo sapiens] Length = 616 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 7 KYYKAILTKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 66 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 67 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 126 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 127 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 180 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 181 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 215 >gi|168180326|ref|ZP_02614990.1| helicase, SNF2/RAD54 family [Clostridium botulinum NCTC 2916] gi|182668683|gb|EDT80661.1| helicase, SNF2/RAD54 family [Clostridium botulinum NCTC 2916] Length = 1077 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 76/213 (35%), Gaps = 27/213 (12%) Query: 2 KQY----HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y ++E Y +++ S + Q+ + E E + K Sbjct: 851 KVYASFAESAKKEFYKEIRERGFNKSKIKILSIITRLRQICCDPSTFIENY---EGSNGK 907 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQE 103 + L I+ I++ F S L D +++ Sbjct: 908 TETLLDIVNSSINAGHKILLFSQFTSVLKNIAEVFKANNINYLYLDGSTKADVRGSLVKD 967 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +N GK + + G GLNL +I++ F WW+ +E R + G K+ Sbjct: 968 FNNGKGDIFLISLKAGGTGLNLTS-ADIVIHFDPWWNPA-----VEDQASDRAHRIGQKK 1021 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V LIA+ TI+E + + + K I D ++ Sbjct: 1022 TVEVIRLIAKGTIEEKIYKIQQKKKEIIDKVIE 1054 >gi|62234443|ref|NP_080850.2| putative DNA helicase INO80 complex homolog 1 [Mus musculus] gi|114149323|sp|Q6ZPV2|INO80_MOUSE RecName: Full=Putative DNA helicase INO80 complex homolog 1 gi|123232376|emb|CAM22022.1| INO80 homolog (S. cerevisiae) [Mus musculus] gi|123236330|emb|CAM25341.1| INO80 homolog (S. cerevisiae) [Mus musculus] Length = 1559 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 70/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1086 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1145 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ I + + G G+NL + ++F+ W+ Sbjct: 1146 TYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1204 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1205 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1254 >gi|46137507|ref|XP_390445.1| hypothetical protein FG10269.1 [Gibberella zeae PH-1] Length = 1114 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 76/220 (34%), Gaps = 31/220 (14%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + G+ + ++ + N + Sbjct: 421 VKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 480 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ +++ + + +++ + L L+ G + Sbjct: 481 VYNAGKMAVLDKLLKRLQKQGSRVLIFSQMSRLLDILEDYCVFREYKYCRIDGGTAHEDR 540 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + + + R Sbjct: 541 IAAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDR 594 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V VY + +N I+E VL+R K + L++ Sbjct: 595 AHRIGQTKQVVVYRFVTENAIEEKVLERAAQKLRLDQLVI 634 >gi|327289025|ref|XP_003229225.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Anolis carolinensis] Length = 2037 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 968 KYYKLILTRNFEALNSKGGGSQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 1027 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1028 SLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1087 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + +V + W+ + Sbjct: 1088 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVVIYDSDWNP-----HNDIQAF 1141 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1142 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1183 >gi|195031155|ref|XP_001988299.1| GH10642 [Drosophila grimshawi] gi|292630863|sp|B4JCS7|RAD54_DROGR RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|193904299|gb|EDW03166.1| GH10642 [Drosophila grimshawi] Length = 786 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 75/236 (31%), Gaps = 47/236 (19%) Query: 1 MKQYHKFQR-----ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--- 52 ++ Y F + D + + + S +L N E+ +E Sbjct: 416 LQIYTNFLKSDQVCRSLADCNEK--TSLTALSDITTLKKLCNHPDLIYEKLAAREKGFEN 473 Query: 53 ------------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----- 86 K L+ ++ + +++ ++ L ++ Sbjct: 474 SQNVLPANYKPKDINPELSGKFMLLDFMLAAIRANSDDKVVLISNYTQTLDLFEQLARKR 533 Query: 87 -----AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWD 140 T+ K + +N+ +S G L G N L F W+ Sbjct: 534 KYSYVRLDGTMTIKKRSKVVDRFNDPSSDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWN 593 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 594 PAN-----DEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 644 >gi|145608774|ref|XP_369873.2| hypothetical protein MGG_06388 [Magnaporthe oryzae 70-15] gi|145016204|gb|EDK00694.1| hypothetical protein MGG_06388 [Magnaporthe oryzae 70-15] Length = 1435 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 83/225 (36%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRE---LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 + Y++ + + D +G A ++ ++ +L N +DE ++ + Sbjct: 805 RLYNQMVKHQKLVVSDGKGGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPTNTSNDL 864 Query: 54 -----EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ ++ K + +++ + + + ++ Sbjct: 865 LWRTAGKFELLDRVLPKYKASGHRVLMFFQMTAIMDIMEDFLRFRGIQYLRLDGTTKSED 924 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++N P + G GLNLQ + ++ + W+ + + Sbjct: 925 RSDLLYQFNRPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 978 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ ++++E +L R R K + ++ A + Sbjct: 979 RAHRIGQKNEVRILRLISSSSVEEKILDRARFKLDMDGKIIQAGR 1023 >gi|281346162|gb|EFB21746.1| hypothetical protein PANDA_013140 [Ailuropoda melanoleuca] Length = 1814 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 825 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 884 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 885 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 944 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 945 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 998 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 999 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1040 >gi|238503530|ref|XP_002382998.1| SNF2 family helicase/ATPase (Ino80), putative [Aspergillus flavus NRRL3357] gi|220690469|gb|EED46818.1| SNF2 family helicase/ATPase (Ino80), putative [Aspergillus flavus NRRL3357] Length = 1553 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1327 DSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1386 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1387 TVADFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1440 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1441 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1479 >gi|24308089|ref|NP_056372.1| chromodomain-helicase-DNA-binding protein 5 [Homo sapiens] gi|51701343|sp|Q8TDI0|CHD5_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 5; Short=CHD-5; AltName: Full=ATP-dependent helicase CHD5 gi|19773960|gb|AAL98962.1|AF425231_1 chromodomain helicase DNA binding protein 5 [Homo sapiens] gi|56203111|emb|CAI19450.1| chromodomain helicase DNA binding protein 5 [Homo sapiens] gi|56417878|emb|CAI19891.1| chromodomain helicase DNA binding protein 5 [Homo sapiens] gi|119591922|gb|EAW71516.1| chromodomain helicase DNA binding protein 5 [Homo sapiens] gi|148922387|gb|AAI46382.1| Chromodomain helicase DNA binding protein 5 [synthetic construct] gi|151555557|gb|AAI48804.1| Chromodomain helicase DNA binding protein 5 [synthetic construct] gi|261857536|dbj|BAI45290.1| Chromodomain-helicase-DNA-binding protein 5 [synthetic construct] Length = 1954 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 958 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 1017 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1018 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1077 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1078 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1131 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1132 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1173 >gi|169343905|ref|ZP_02864901.1| putative helicase [Clostridium perfringens C str. JGS1495] gi|169298025|gb|EDS80116.1| putative helicase [Clostridium perfringens C str. JGS1495] Length = 1065 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 22/190 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN 78 + N + K ++ + K+ ++ I++ + I++ F Sbjct: 864 DKINLFAYLTKLREICLDPSLVVPDYT---GGSSKLTVVKEIVKDASESGKKILLFSQFT 920 Query: 79 SDL----------ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 S L G + ++ +N + I + + G GLNL Sbjct: 921 SVLKKIEEDFKKEDISYLYLDGGTSAKDRVERVKRFNEDSNIKVFLISLKAGGVGLNLTS 980 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ F WW+ +E R + G + V V L+A++TI+E ++ K Sbjct: 981 -ASVVIHFDPWWNPA-----VEEQATDRAHRFGQENKVEVIKLVAKDTIEEKIVLMQEDK 1034 Query: 188 STIQDLLLNA 197 + L++ Sbjct: 1035 RELIQSLMDG 1044 >gi|149240541|ref|XP_001526146.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces elongisporus NRRL YB-4239] gi|146450269|gb|EDK44525.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces elongisporus NRRL YB-4239] Length = 1088 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 79/227 (34%), Gaps = 39/227 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 Q E Y L ++I+A N + ++ + N + Sbjct: 406 DMQLEWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 465 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ ++ + + +++ + L L+ + Sbjct: 466 EHLIDNSGKMIILDKMLKKFQKEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSH 525 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N + + G G+NL +I++ + W+ + + Sbjct: 526 EDRIEAIDEYNAPDSAKFVFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQA 579 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G K+ V VY + +N I+E VL+R K + L++ + Sbjct: 580 MDRAHRIGQKKQVKVYRFVTENAIEEKVLERAAQKLRLDQLVIQQGR 626 >gi|146413953|ref|XP_001482947.1| hypothetical protein PGUG_04902 [Meyerozyma guilliermondii ATCC 6260] Length = 1034 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 79/228 (34%), Gaps = 39/228 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 + Q Y L ++I+A N + ++ + N + Sbjct: 363 EMQIRWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 422 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP----------QGRTL 94 + K+ L+ ++ + + +++ + L L+ Sbjct: 423 EHLAYNSGKMIILDKMLKKFREQGSRVLIFSQMSRLLDILEDYCYLRDYEYCRIDGSTAH 482 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I +N + + + G G+NL +I++ + W+ + + Sbjct: 483 EDRIEAIDLYNAPDLDKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQA 536 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G K+ V VY + +N I+E VL+R K + L++ ++ Sbjct: 537 MDRAHRIGQKKQVHVYRFVTENAIEEKVLERAAQKLRLDQLVIQQGRQ 584 >gi|324499809|gb|ADY39928.1| Chromodomain-helicase-DNA-binding protein 3 [Ascaris suum] Length = 1844 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/224 (11%), Positives = 65/224 (29%), Gaps = 34/224 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 K Y + L + + + + N + + H Sbjct: 880 KYYKNILTRNFEALNPKGGGTQVSLLNIIMDLKKCCNHPYLFPKASIEAPKHKNGMYEGT 939 Query: 53 -----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K L+ ++ K +++ L L+ + Sbjct: 940 ALIKASGKFILLQKMLRKLKEQGHRVLIFSQMTKMLDVLEDFCENEGYKYERIDGSITGQ 999 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + + G G+NL + ++ + W+ + Sbjct: 1000 ARQDAIDRFNAPNAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1053 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G + V +Y + +N+++E + + K + L++ A Sbjct: 1054 SRAHRIGQQNKVLIYRFVTRNSVEERITSVAKKKMLLTHLVVRA 1097 >gi|256074706|ref|XP_002573664.1| helicase [Schistosoma mansoni] gi|238658849|emb|CAZ29896.1| helicase swr1, putative [Schistosoma mansoni] Length = 1156 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 18/179 (10%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL---- 81 + K Q Y KI+ L + K + I++ F L Sbjct: 894 QIHKLCQFYETLSSYTLSPESIISGSGKIQWLNDNLPKLVSEGHRILIFSQFVIMLDILE 953 Query: 82 ------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 R + + I +N I + + G G+NL G + ++ Sbjct: 954 EFLRITNRRYIRMDGSTPVSERQTLIDRFNSSSIEVFLLSTRAGGLGINLT-GADTVIIH 1012 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + ++ +R R + G K V V LI++ T++E +L+ K ++ + Sbjct: 1013 DIDFNP-----YNDRQAEDRCHRLGQKNPVHVIRLISEGTLEEGMLRIASEKLQMEQNV 1066 >gi|194386148|dbj|BAG59638.1| unnamed protein product [Homo sapiens] Length = 693 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 84 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 143 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 144 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 203 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 204 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 257 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 258 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 292 >gi|302883714|ref|XP_003040756.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4] gi|256721646|gb|EEU35043.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4] Length = 805 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N E K W + + Sbjct: 511 LKAINILKKLCNHPDLLNLSDDLPGSEGCCPEDFVPKESRGRDREVKSWYSGKMAVLDRM 570 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ S L ++ ++K + +N+ Sbjct: 571 LARIRQDTNDKIVLISNYTSTLDLFERLCRSRQYGCLRLDGTMNVNKRQKLVDRFNDPNG 630 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 631 DEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 684 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 685 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 716 >gi|242000110|ref|XP_002434698.1| chromodomain helicase DNA binding protein, putative [Ixodes scapularis] gi|215498028|gb|EEC07522.1| chromodomain helicase DNA binding protein, putative [Ixodes scapularis] Length = 1882 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 66/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQGENIE-AFNSASKTVKCLQLANGAVYY---------DEEKHWKEV 51 K Y Y L + + + + + + N + ++ Sbjct: 966 KYYKYILTRNYEALNAKGGSHSVSLLNIMMDLKKCCNHPYLFPAASQEAPRMPNGAYEGS 1025 Query: 52 HDEKIKALEVIIEKA------NAAPIIVAYHFNSDLARL----------QKAFPQGRTLD 95 K +++ K +++ L + + G T Sbjct: 1026 ALTKACGKLILLHKMLRTLKETGHRVLIFSQMTKMLDIMEDFLEAEGYKYERIDGGITGS 1085 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I +N P + G G+NL + ++ + W+ + Sbjct: 1086 QRQEAIDRFNAPNAPQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1139 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1140 SRAHRIGQANKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1181 >gi|52630326|ref|NP_001005273.1| chromodomain-helicase-DNA-binding protein 3 isoform 1 [Homo sapiens] gi|88911273|sp|Q12873|CHD3_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 3; Short=CHD-3; AltName: Full=ATP-dependent helicase CHD3; AltName: Full=Mi-2 autoantigen 240 kDa protein; AltName: Full=Mi2-alpha; AltName: Full=Zinc finger helicase; Short=hZFH gi|119610521|gb|EAW90115.1| chromodomain helicase DNA binding protein 3, isoform CRA_b [Homo sapiens] Length = 2000 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 994 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1053 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1054 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1113 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1114 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1167 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1168 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1209 >gi|255010206|ref|ZP_05282332.1| SNF family helicase [Bacteroides fragilis 3_1_12] Length = 1013 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 66/207 (31%), Gaps = 20/207 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + L L + +E + ++ QLA + I Sbjct: 796 ELYQHEKNSLRNILLEQTVEKGQQPLIVLNGILRLRQLACHPQMILPGFIGESGKLNLII 855 Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + ++ +++ F L + A G + ++ + + + Sbjct: 856 ETFETL-RSEGHKVLIFSSFVKHLELVADEFRKRQWDYALLTGSSTNRPEEIARFSRDPR 914 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I + G GLNL + + WW+ Q + R + G + V Y Sbjct: 915 IQAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAAEAQA-----IARAHRIGQDKQVIAY 968 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 I Q +I+E ++Q K + + + Sbjct: 969 RFITQGSIEEKIIQLQEEKRKLAETFI 995 >gi|7022541|dbj|BAA91637.1| unnamed protein product [Homo sapiens] Length = 831 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 288 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 347 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 348 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 407 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 408 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 461 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 462 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|227496410|ref|ZP_03926698.1| helicase [Actinomyces urogenitalis DSM 15434] gi|226834062|gb|EEH66445.1| helicase [Actinomyces urogenitalis DSM 15434] Length = 1213 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 29/231 (12%), Positives = 73/231 (31%), Gaps = 41/231 (17%) Query: 2 KQYHKF---QRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYD------------- 43 + Y +R+ L ++ F++ Q+A Sbjct: 945 RAYEARLIRERQKVMGLLEDDTAQARFSALRSLTILRQMALDPALVPAAEEGAQDDADPA 1004 Query: 44 -------EEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ--------K 86 + + K++ L + +V F L+ ++ + Sbjct: 1005 AGHERAVRQGGRRPRPSAKVEMLRDTLVPIVAEGHRALVFSQFTRYLSSVREELEAAGLR 1064 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +G+ + + G GL L + + WW+ + +Q Sbjct: 1065 TLYLDGGTSDRQRVVAQFRDGEADVFLISLKAGGFGLTLTE-ADYVFLLDPWWNPQAEEQ 1123 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++R + G + V VY ++A +TI++ V+ K+ + ++ Sbjct: 1124 AVDR-----AHRIGQDKPVMVYRMVAADTIEDKVMALKEKKAGLFAKVVEG 1169 >gi|239606662|gb|EEQ83649.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces dermatitidis ER-3] gi|327351568|gb|EGE80425.1| ISWI chromatin-remodeling complex ATPase ISW1 [Ajellomyces dermatitidis ATCC 18188] Length = 1132 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 439 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 498 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKD 97 + K+ L+ I+ K + +++ + L + Sbjct: 499 IDNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQYCRIDGSTAHEDR 558 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ + W+ + + + R Sbjct: 559 IAAIDEYNRPGSEKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 612 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 613 AHRIGQTKQVIVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 658 >gi|222637088|gb|EEE67220.1| hypothetical protein OsJ_24338 [Oryza sativa Japonica Group] Length = 2258 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 29/227 (12%), Positives = 78/227 (34%), Gaps = 33/227 (14%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHDEK 55 + Y + Y L+ G+ + + ++ ++ N E + +H+ + Sbjct: 924 EYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMR 983 Query: 56 --------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLD 95 + + I + +++ L L+ ++ Sbjct: 984 IKASAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKTFERVDGSVSVA 1043 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I +N+ K + SCG G+NL + ++ + ++ + + Sbjct: 1044 ERQAAIARFNQDKSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNP-----HADIQAMN 1097 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + VY L+ + +++E +L + K + L +N + + Sbjct: 1098 RAHRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVNKSESQ 1144 >gi|218199663|gb|EEC82090.1| hypothetical protein OsI_26092 [Oryza sativa Indica Group] Length = 2275 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 29/227 (12%), Positives = 78/227 (34%), Gaps = 33/227 (14%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHDEK 55 + Y + Y L+ G+ + + ++ ++ N E + +H+ + Sbjct: 941 EYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMR 1000 Query: 56 --------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLD 95 + + I + +++ L L+ ++ Sbjct: 1001 IKASAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKTFERVDGSVSVA 1060 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I +N+ K + SCG G+NL + ++ + ++ + + Sbjct: 1061 ERQAAIARFNQDKSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNP-----HADIQAMN 1114 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + VY L+ + +++E +L + K + L +N + + Sbjct: 1115 RAHRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVNKSESQ 1161 >gi|239609929|gb|EEQ86916.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3] Length = 1686 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1384 DSGKLAKLDELLHELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1443 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1444 TVLDFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1497 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1498 LGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1536 >gi|325095531|gb|EGC48841.1| DNA ATP-dependent helicase [Ajellomyces capsulatus H88] Length = 1676 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1379 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1438 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1439 TVLDFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1492 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1493 LGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1531 >gi|327308272|ref|XP_003238827.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] gi|326459083|gb|EGD84536.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] Length = 1113 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 75/226 (33%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 431 VKWYQKILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 490 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 491 IDNSGKMVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDR 550 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ F W+ + + + R Sbjct: 551 IQAIDEYNRPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQA-----DLQAMDR 604 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 605 AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 650 >gi|289618531|emb|CBI55255.1| unnamed protein product [Sordaria macrospora] Length = 1872 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 74/248 (29%), Gaps = 59/248 (23%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWK------- 49 K + F + + E + +L N + H + Sbjct: 1543 KLFEDFTKREAAKITEEAGRDDKEAKAHIFQALQYMRKLCNSPALVMKPGHKQYDDTQKF 1602 Query: 50 ----------EVHDEKIKALEVIIEKA-----------------NAAPIIVAYHFNSDLA 82 VH K+ AL ++ ++ L Sbjct: 1603 LAKRNTSLEDPVHAPKLTALRDLLVDCGIGVEGQESSDPLYTPIKPHRALIFCQMKEMLD 1662 Query: 83 RLQKAF-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 +Q + + ++N + +L + G GLNL G Sbjct: 1663 MVQNTVLKKMLPSVSHLRLDGSVDPTRRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT-G 1721 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R K Sbjct: 1722 ADTVIFVEHDWNPQK-----DLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKI 1776 Query: 189 TIQDLLLN 196 + ++N Sbjct: 1777 DVASTVVN 1784 >gi|325187562|emb|CCA22100.1| Putative SWI/SNF related putative [Albugo laibachii Nc14] Length = 1114 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 80/232 (34%), Gaps = 40/232 (17%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDE----- 44 K Y + QRE Y + + N+ + ++ ++ N ++ Sbjct: 419 KLYVGLSEMQREWYMRVLHRDAAHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGP 478 Query: 45 ---EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD---- 95 E + K+ L ++ K A + ++ S + L+ Sbjct: 479 PYLEGPHLWENCGKLTLLHRLLPKLKAQGSRALIFCQMTSMMDILEDYMRYFNHEYCRLD 538 Query: 96 ------KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++E+N + G G+NL +I++ + W+ + Sbjct: 539 GQTKGEERDIMMEEFNSPGSTTFCFLLSTRAGGLGINL-ATADIVILYDSDWNPQ----- 592 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I+ T++E +++R K + ++ + Sbjct: 593 VDLQAMDRAHRIGQTKTVRVFRFISDGTVEEKIVERAERKLYLDAAIIQQGR 644 >gi|310792871|gb|EFQ28332.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1119 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 75/224 (33%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + G+ + ++ + N + Sbjct: 422 VKWYQKILEKDIDAVNGANGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 481 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ G + Sbjct: 482 VYNAGKMVVLDKLLARMQKQGSRVLIFSQMSRLLDILEDYCVFREYKYCRIDGGTAHEDR 541 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + + + R Sbjct: 542 IAAIDEYNKPGSEKFIFLLTTRAGGLGINLTS-ADIVVLYDSDWNPQA-----DLQAMDR 595 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY + N I+E VL+R K + L++ + Sbjct: 596 AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQQGR 639 >gi|251770931|gb|EES51516.1| putative helicase, Snf2 family [Leptospirillum ferrodiazotrophum] Length = 1068 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 56/179 (31%), Gaps = 21/179 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK------- 86 A E K H K I + I++ F L ++ Sbjct: 874 ACHPGLLPPELRGKRGHSSKFILTLDKIAEGVEEGHKILLFSQFTGMLDLFEEALPSRGI 933 Query: 87 ---AFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + + + + + + G GL L + + + WW+ Sbjct: 934 STVRLDGSTPISERQKRVALFQSDAPDSPRVFLSSLKAGGVGLTLTK-ADYVFHYDPWWN 992 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +E R + G R+VF+Y + + T++E V + K I LL + Sbjct: 993 PQ-----VEAQASDRSHRIGQTRSVFIYRFLVRGTVEERVQDLKKVKRDIFSRLLGGEE 1046 >gi|73946651|ref|XP_533537.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 1 [Canis familiaris] Length = 1542 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 73/217 (33%), Gaps = 28/217 (12%) Query: 3 QYHKFQRELYCDLQGEN----IEAFNSASKTVKCLQLANGAVYYDE----EKHWKEVHDE 54 Y Q + G + A + ++ ++ N + + Sbjct: 961 LYRHMQAKGILLTDGSEKDKKVRAKTLMNTIMQLRKICNHPYMFQHIEVNCSNTLYRASG 1020 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K + L+ I+ K A +++ S + ++ F + ++ Sbjct: 1021 KFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLK 1080 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++NE + + G GLNLQ + +V F W+ + + R + G Sbjct: 1081 KFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQAQDRAHRIG 1134 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V L N+++E +L + K + ++ A Sbjct: 1135 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1171 >gi|119571321|gb|EAW50936.1| chromodomain helicase DNA binding protein 1-like, isoform CRA_a [Homo sapiens] Length = 897 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 288 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 347 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 348 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 407 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 408 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 461 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 462 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|330801436|ref|XP_003288733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum] gi|325081209|gb|EGC34733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum] Length = 1544 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 79/222 (35%), Gaps = 30/222 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------D 53 K Y +F D++ N+ +++N + H ++ Sbjct: 981 KLYLEFLDSN--DIKSVLEGRRNALYGIDILKKISNHPDILHMDPHDEDRPEDYGNINRS 1038 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----------DPCT 100 K++ ++ I+ +++ L ++ T + Sbjct: 1039 AKLRVVDQILPLWYKQGDKVLLFCQTRQMLDIVEAYIRNSTTFNYLRMDGTTSVKHRQSL 1098 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+N + K+ + G GLNL G N ++ F W+ + R + Sbjct: 1099 VEEFNLDEKLFIFLLTTKVGGLGLNLT-GANRVILFDPDWNPST-----DTQARERVYRI 1152 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K++V +Y L+ TI+E + R K + + +L +++ Sbjct: 1153 GQKKSVTIYRLVTLGTIEEKIYHRQIYKQFLTNKILKDPRQK 1194 >gi|50418184|gb|AAH77717.1| CHD1L protein [Homo sapiens] Length = 693 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 84 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 143 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 144 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 203 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 204 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 257 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 258 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 292 >gi|28629217|gb|AAO49505.1| ALC1 [Homo sapiens] Length = 897 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 288 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 347 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 348 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 407 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 408 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 461 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 462 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|296228587|ref|XP_002759879.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Callithrix jacchus] Length = 862 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 252 KYYKAILMKDLDAFENETGKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASG 311 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 312 KLHLLDKLLAFLYSRGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 371 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 372 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 425 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 426 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 460 >gi|148612870|ref|NP_004275.3| chromodomain-helicase-DNA-binding protein 1-like [Homo sapiens] gi|311033359|sp|Q86WJ1|CHD1L_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like; AltName: Full=Amplified in liver cancer protein 1 gi|55663194|emb|CAH72650.1| chromodomain helicase DNA binding protein 1-like [Homo sapiens] Length = 897 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 288 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 347 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 348 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 407 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 408 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 461 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 462 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|28175792|gb|AAH43501.1| Similar to RIKEN cDNA 4432404A22 gene [Homo sapiens] Length = 890 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 281 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 340 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 341 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 400 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 401 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 454 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 455 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 489 >gi|301613323|ref|XP_002936158.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7, partial [Xenopus (Silurana) tropicalis] Length = 2908 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 30/238 (12%), Positives = 74/238 (31%), Gaps = 44/238 (18%) Query: 2 KQYHKFQRELYCDL----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK-----EVH 52 K Y + + L G + N + ++ + N + + E H Sbjct: 1142 KYYRAILEKNFAFLSKGGGGGHANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFRETH 1201 Query: 53 D---------------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD 95 + K+ ++ ++ K +++ L L+ Q R Sbjct: 1202 NCDPSDFQLQAMTQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPY 1261 Query: 96 KD----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + I +++ + + G G+NL + + F W+ + Sbjct: 1262 ERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN 1320 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 1321 -----DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1373 >gi|258572078|ref|XP_002544816.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Uncinocarpus reesii 1704] gi|237905086|gb|EEP79487.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Uncinocarpus reesii 1704] Length = 1435 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 78/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + D +G ++ ++ +L N ++ + Sbjct: 813 KLYKQLMTHNKMVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEEEMNPGKGTNDL 872 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ ++ K + +++ + + ++ D Sbjct: 873 IWRTAGKFELLDRVLPKFKASGHRVLMFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDD 932 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ + W+ + + Sbjct: 933 RSELLRLFNAPGSDYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 986 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 987 RAHRIGQKNEVRILRLISSNSVEERILERAQFKLDMDGKVIQAGK 1031 >gi|225678325|gb|EEH16609.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Paracoccidioides brasiliensis Pb03] Length = 1391 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 33/225 (14%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSAS-KTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + S ++ +L N ++ + Sbjct: 750 KLYKQLVTHNKLVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDL 809 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K + +++ + + ++ D Sbjct: 810 IWRTAGKFELLDRILPKFKASGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 869 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G GLNLQ + ++ + W+ + + Sbjct: 870 RSDLLKEFNAPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 923 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L+R + K + ++ A K Sbjct: 924 RAHRIGQKNEVRILRLITSNSVEERILERAQFKLDMDGKVIQAGK 968 >gi|159465629|ref|XP_001691025.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158279711|gb|EDP05471.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 1061 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 79/223 (35%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q++ Y L ++++A N + ++ + N + Sbjct: 415 EMQKKWYAALLQKDVDALNGGADRAKLLNVVMQLRKCCNHPYLFQGAEPGPPFITGEHLV 474 Query: 51 VHDEKIKALEVIIEKANAA--PIIVAYHFNSDLAR---------LQKAFPQGRTLDK-DP 98 + K+ L+ ++ + +++ + G T + Sbjct: 475 ENSGKLVLLDKLLPRLKERESRVLIFSQMTRMIDILEDYCLYRGYGYCRIDGNTDGEARD 534 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+N + + G G+NL +I+V + W+ + ++ + R Sbjct: 535 NMIDEFNRPNSSKFIFLLSTRAGGLGINL-ATADIVVLYDSDWNPQ-----MDLQAMDRA 588 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ +N+I+E V+++ K + L++ + Sbjct: 589 HRIGQKKEVQVFRFCIENSIEEKVIEKAYKKLRLDALVIQQGR 631 >gi|302307807|ref|NP_984563.2| AEL297Wp [Ashbya gossypii ATCC 10895] gi|299789178|gb|AAS52387.2| AEL297Wp [Ashbya gossypii ATCC 10895] Length = 895 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 73/247 (29%), Gaps = 53/247 (21%) Query: 3 QYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 Y F R L +L N Sbjct: 575 IYEHFVRSREVAKLMKGTGSQP--LKAIGLLKKLCNHPDLLDLPDEIAGSTNLIPDDYQS 632 Query: 43 ---------DEEKHWKEVHDEKIKALEVIIEKANA---APIIVAYHFNSDLARLQKAFPQ 90 + H K LE + K I++ ++ L ++K Sbjct: 633 AMTHNSRGGRSHVEVQTTHSSKFAILERFLFKIKHESNDKIVLISNYTQTLDLIEKMCRY 692 Query: 91 GR----------TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLW 138 T++K + ++N+ + + G G+NL G N L+ Sbjct: 693 NHYGVLRLDGTMTINKRQKLVDKFNDPSGEEFIFLLSSKAGGCGINL-IGANRLILMDPD 751 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ Q + R + G K+ F+Y I +I+E + QR K ++ +++ Sbjct: 752 WNPAADQ-----QALARVWRDGQKKDCFIYRFITTGSIEEKIYQRQSMKMSLSSCVVDE- 805 Query: 199 KKETIHV 205 K++ + Sbjct: 806 KEDVERL 812 >gi|253742393|gb|EES99228.1| Chromodomain helicase-DNA-binding protein, putative [Giardia intestinalis ATCC 50581] Length = 2636 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 73/210 (34%), Gaps = 26/210 (12%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW------KEVHDEKIKALE 60 + Y L ++ + + ++ ++ N + K K + L+ Sbjct: 1527 LLEQNYEMLTAKSYNSVKLQNLLMQLRKVCNHPYIIHDLKLHTASLKDMVDGSGKFQVLD 1586 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK 108 +++K N +++ L L++ T ++ I +NE Sbjct: 1587 KLLDKLNSEGHRVLIFSQLIKTLDILERYCFYKKYKFQRLQGSMTSEQRRRAINNFNEKN 1646 Query: 109 IP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + S G G+NL + ++ F ++ + + R + G + V Sbjct: 1647 SKDFIFLLSTRSGGQGINL-ATADTVIIFDADYNPQN-----DLQAAGRVHRIGQSKPVT 1700 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Y L+ +++++E +L K + ++ Sbjct: 1701 IYRLVTRDSVEERILDIGHRKLMLDYAIIQ 1730 >gi|261198791|ref|XP_002625797.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] gi|239594949|gb|EEQ77530.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] Length = 1686 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1384 DSGKLAKLDELLHELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1443 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1444 TVLDFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1497 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1498 LGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1536 >gi|171677949|ref|XP_001903925.1| hypothetical protein [Podospora anserina S mat+] gi|170937043|emb|CAP61702.1| unnamed protein product [Podospora anserina S mat+] Length = 1057 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 76/224 (33%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y + + G+ + ++ + N + Sbjct: 394 VKWYKRILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 453 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ +A + +++ + L L+ G + Sbjct: 454 VFNSGKMIILDKLLKRMQAQDSRVLIFSQMSRLLDILEDYCVFRGYKYCRIDGGTAHEDR 513 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I++ + W+ + + + R Sbjct: 514 IAAIDEYNKPGSEKFIFLLTTRAGGLGINLTT-ADIVILYDSDWNPQA-----DLQAMDR 567 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY + N I+E VL+R K + L++ + Sbjct: 568 AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQQGR 611 >gi|50546160|ref|XP_500607.1| YALI0B07513p [Yarrowia lipolytica] gi|49646473|emb|CAG82840.1| YALI0B07513p [Yarrowia lipolytica] Length = 807 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 83/239 (34%), Gaps = 48/239 (20%) Query: 3 QYHKFQ--RELYCDLQGENIE-AFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 Y +F+ +E L+GE + + +L N + Sbjct: 487 LYVQFRTSKEARSLLKGEKSSEGTTTLNAIGILKKLCNHPDLLKLPDEIEGCRKVFPDDY 546 Query: 52 ----------------HDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ-- 90 K LE ++ N I++ ++ + L ++K Q Sbjct: 547 APPDERGSRDRDIYPHFSAKFLILERMLRSINAETNDKIVIISNYTATLDLIEKMCRQRR 606 Query: 91 --------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++K + ++N+ + + + G GLNL G N L+ W+ Sbjct: 607 YGCLRLDGTMNINKRAKLVTQFNDPEGQEFIFLLSSKAGGCGLNL-IGANRLILMDPDWN 665 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q + R + G K+ FVY LIA TI+E + QR K ++ +++ ++ Sbjct: 666 PAADQ-----QALARVWRDGQKKDCFVYRLIATGTIEEKIFQRQSMKQSLSTCVVDEVQ 719 >gi|261335950|emb|CBH09283.1| putative DNA excision repair protein ERCC-6 [Heliconius melpomene] Length = 944 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 66/195 (33%), Gaps = 30/195 (15%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKE-----------VHDEKIKALEVII--EKANAAPI 71 ++ N Y E H + K+ + ++ Sbjct: 461 VLVALTTLRKICNHPDLYLYEAHDDDEDIDEESFGNWKRSGKMSVVHSLLKIWLKQGHRT 520 Query: 72 IVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCG 120 ++ + L L++ + + + I+ +N K + A G Sbjct: 521 LIFSQSRAMLCILEQHLQKHKFEYLKMDGSVSVAQRQNLIKTFNENAKYLVFLATTRVGG 580 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL G + ++ + W+ + R + G +R V VY L++ TI+E + Sbjct: 581 LGVNLT-GADRVIIYDPDWNPAT-----DNQAKERAWRIGQQRNVTVYRLLSAGTIEEKI 634 Query: 181 LQRLRTKSTIQDLLL 195 QR K+ + + +L Sbjct: 635 YQRQIFKNFLSNKIL 649 >gi|227364978|ref|ZP_03849019.1| helicase domain protein [Lactobacillus reuteri MM2-3] gi|325681709|ref|ZP_08161229.1| SNF2/helicase domain protein [Lactobacillus reuteri MM4-1A] gi|227069989|gb|EEI08371.1| helicase domain protein [Lactobacillus reuteri MM2-3] gi|324979021|gb|EGC15968.1| SNF2/helicase domain protein [Lactobacillus reuteri MM4-1A] Length = 292 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 27/213 (12%) Query: 3 QYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + L +Q + ++ + +L D KIK Sbjct: 71 LYQARAQRLIRQIQKQNDEEFQQNKLAVLAEITRLRELCCSPQLLDRGYS---GPSGKIK 127 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 A +I+ + I++ F S LA + + E+N Sbjct: 128 ATMNLIKDEMADNHKILLFSQFTSALAILKEKLANAGIKYFVIEGKTKKEDRLQFVDEFN 187 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + + G GLNL ++++ F WW++ E R + G K Sbjct: 188 SYDQPAVFLISLKAGGTGLNLTS-ADVVIHFDPWWNIAA-----ENQATDRAHRIGQKNN 241 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y +IAQNTI+E +++ + K+ + + +L+ Sbjct: 242 VTIYKMIAQNTIEEKIVEMQQKKAALANSILSG 274 >gi|327350853|gb|EGE79710.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ATCC 18188] Length = 1686 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1384 DSGKLAKLDELLHELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1443 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1444 TVLDFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1497 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1498 LGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1536 >gi|254569936|ref|XP_002492078.1| ATPase component of the RSC chromatin remodeling complex [Pichia pastoris GS115] gi|238031875|emb|CAY69798.1| ATPase component of the RSC chromatin remodeling complex [Pichia pastoris GS115] gi|328351432|emb|CCA37831.1| ATP-dependent helicase STH1/SNF2 [Pichia pastoris CBS 7435] Length = 1239 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 77/229 (33%), Gaps = 40/229 (17%) Query: 3 QYHKFQRELYCDLQ--------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-- 52 Y + + + I+ N +K ++ ++ N +DE ++ + Sbjct: 719 LYQQMLKHNALFIGASSGPGVSKSGIKGLN--NKIMQLRKICNHPFVFDEVENVVDPTRS 776 Query: 53 --------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD------- 95 K + L+ ++ K +++ + + ++ Sbjct: 777 TADLIWRTSAKFELLDRVLPKFCATGHRVLIFFQMTQVMDIMEDYLRYREMKYLRLDGST 836 Query: 96 ---KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 837 NADDRQDMLKAFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DL 890 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 891 QAQDRAHRIGQKNEVRILRLITTDSVEEVILERAHQKLDIDGKVIQAGK 939 >gi|73946641|ref|XP_860308.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 19 [Canis familiaris] Length = 1550 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 75/223 (33%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y Q + G + A + ++ ++ N + + KE Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGGAKTLMNTIMQLRKICNHPYMFQHIEVMKENPACSNEA 1022 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K A +++ S + ++ F + Sbjct: 1023 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1082 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++++NE + + G GLNLQ + +V F W+ + + Sbjct: 1083 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQAQD 1136 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1179 >gi|256072791|ref|XP_002572717.1| helicase [Schistosoma mansoni] gi|238657881|emb|CAZ28949.1| helicase, putative [Schistosoma mansoni] Length = 1753 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 70/182 (38%), Gaps = 19/182 (10%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 K QL + + K++ L ++ + + +++ L L++ Sbjct: 1323 KLHQLVMSCRIQFPDPRLIQYDCGKLQRLHSLLRELKSGNHRVLIFTQMARMLDILEQFL 1382 Query: 89 PQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + ++ +N + +I + S G G+NL G + ++F+ Sbjct: 1383 AYHGHRYLRLDGTTKVEQRQVLMERFNQDSQIFVFILSTRSGGLGINLT-GADTVIFYDS 1441 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 1442 DWNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILRKANQKRFLSDVAIEG 1496 Query: 198 LK 199 K Sbjct: 1497 GK 1498 >gi|114553052|ref|XP_525165.2| PREDICTED: chromodomain helicase DNA binding protein 5 [Pan troglodytes] Length = 1991 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 23/222 (10%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYH-KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y R + + + + N + + Sbjct: 958 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 1017 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L + + Sbjct: 1018 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLGEDFLEYEGYKYERIDGGITGG 1077 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1078 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1131 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1132 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1173 >gi|328768836|gb|EGF78881.1| hypothetical protein BATDEDRAFT_12619 [Batrachochytrium dendrobatidis JAM81] Length = 680 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 74/223 (33%), Gaps = 35/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------------EKHWK 49 Y F ++ L + +L N + + K + Sbjct: 362 IYRHFSKQEMNKLAAKER-GEKPEKAITTLKKLVNHPILLNRDDMEDSWIPKEFSFKECQ 420 Query: 50 EVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLA----------RLQKAFPQGRTLDK 96 + K+ LE ++ + + + I++ ++ L T+ K Sbjct: 421 PEYSGKMYLLERMLCQMHAQSSDKIVLISNYTQTLDAIEKMCRVRKWQLCRLDGTMTIQK 480 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N+ P + + G G+NL G N L+ W+ + + Sbjct: 481 RQKLVDRFNDPTQPEFIFLLSSKAGGCGINL-IGANRLILTDPDWNPAN-----DAQALA 534 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + F+Y IA TI+E + QR K ++ +++ Sbjct: 535 RVWRDGQTKVCFIYRFIATGTIEEKIFQRQAHKQSLSSCVVDE 577 >gi|317025573|ref|XP_001389339.2| ISWI chromatin-remodeling complex ATPase ISW2 [Aspergillus niger CBS 513.88] Length = 1121 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 77/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 437 VKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 496 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 497 VYNAGKMTILDKLLARMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTTAHEDR 556 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V F W+ + + + R Sbjct: 557 IAAIDEYNKPGSEKFIFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQA-----DLQAMDR 610 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 611 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 656 >gi|313148000|ref|ZP_07810193.1| Snf2 family helicase [Bacteroides fragilis 3_1_12] gi|313136767|gb|EFR54127.1| Snf2 family helicase [Bacteroides fragilis 3_1_12] Length = 960 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 66/207 (31%), Gaps = 20/207 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + L L + +E + ++ QLA + I Sbjct: 743 ELYQHEKNSLRNILLEQTVEKGQQPLIVLNGILRLRQLACHPQMILPGFIGESGKLNLII 802 Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + ++ +++ F L + A G + ++ + + + Sbjct: 803 ETFETL-RSEGHKVLIFSSFVKHLELVADEFRKRQWDYALLTGSSTNRPEEIARFSRDPR 861 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I + G GLNL + + WW+ Q + R + G + V Y Sbjct: 862 IQAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAAEAQA-----IARAHRIGQDKQVIAY 915 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 I Q +I+E ++Q K + + + Sbjct: 916 RFITQGSIEEKIIQLQEEKRKLAETFI 942 >gi|295086172|emb|CBK67695.1| Superfamily II DNA/RNA helicases, SNF2 family [Bacteroides xylanisolvens XB1A] Length = 946 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 64/206 (31%), Gaps = 21/206 (10%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + L L F+ + ++ QL+ + +I Sbjct: 730 YEQEKNSLRNILLQHPQSTNRLHSFSVLNGILRLRQLSCHPQLILPDYTGTSGKTAQIIE 789 Query: 59 LEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + ++ +++ F L + A G T ++ + + Sbjct: 790 TFDTL-QSEGHKVLIFSSFVKHLEVLAEAFRERGWKYALLTGATNNRPSEIAHFTEQKDV 848 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL + + WW+ E + R + G + V Y Sbjct: 849 QAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAYR 902 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I QN+I+E +L K + + + Sbjct: 903 FITQNSIEEKILHLQDEKRKLAETFV 928 >gi|240272910|gb|EER36435.1| lymphocyte-specific helicase [Ajellomyces capsulatus H143] gi|325095672|gb|EGC48982.1| lymphocyte-specific helicase [Ajellomyces capsulatus H88] Length = 983 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 75/220 (34%), Gaps = 28/220 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------DEKIK 57 + ++ L I + + ++ N + H K+ Sbjct: 680 RIEKAKTAQLAKREIASKKLQNPVMQARLACNSPHNFYWPWGDDPSHIDDTLITSSGKML 739 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEW 104 L+ +I + I++ F + L + IQ + Sbjct: 740 LLDRLIPCLMSKGHKILIFSQFKTQLDLLQDYATYLRGWNCCRIDGAVSQVDRQAQIQAF 799 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N + + + G G+NL + ++ F W+ ++ + R + G + Sbjct: 800 NTDPDYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTK 853 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 854 PVIVYRLATRGTVEQTLLEKADSKRRLEKLVIQKGKFKSL 893 >gi|194208118|ref|XP_001492263.2| PREDICTED: chromodomain helicase DNA binding protein 5 [Equus caballus] Length = 1936 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 940 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 999 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1000 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1059 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1060 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1113 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1114 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1155 >gi|73999128|ref|XP_857674.1| PREDICTED: similar to chromodomain helicase DNA binding protein 7 isoform 3 [Canis familiaris] Length = 2191 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 411 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 470 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 471 DSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 530 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 531 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 587 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 588 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 640 >gi|320587640|gb|EFX00115.1| tbp associated factor [Grosmannia clavigera kw1407] Length = 1928 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 74/200 (37%), Gaps = 13/200 (6%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLA--NGAVYYDEEKHWKEVHDE-KIKA 58 + Y + QR + QG +IE N A K L G + ++ K Sbjct: 1645 RMYDETQR--LLERQGSSIEDPNHAPKLTALRDLLVDCGIGVEGDGDGSDPLYQPIKPHR 1702 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-DKDPCTIQEWN-EGKIPLLFAHP 116 + + ++ S L + G ++ + +N + +L Sbjct: 1703 ALIFCQMKEMLDMVQNTVLKSMLPSVSYLRLDGSVEANRRQDIVNRFNKDPSYDVLLLTT 1762 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GLNL G + ++F W+ + + + R + G K+ V VY LI + T+ Sbjct: 1763 NVGGLGLNLT-GADTVIFVEHDWNPQR-----DLQAMDRAHRIGQKKVVNVYRLITRGTL 1816 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E +L R K + ++N Sbjct: 1817 EEKILSLQRFKIDVASTVVN 1836 >gi|302658601|ref|XP_003021002.1| hypothetical protein TRV_04867 [Trichophyton verrucosum HKI 0517] gi|291184877|gb|EFE40384.1| hypothetical protein TRV_04867 [Trichophyton verrucosum HKI 0517] Length = 1522 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1235 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1294 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1295 TVLDFQQRPEIFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1348 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1349 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1387 >gi|270007595|gb|EFA04043.1| hypothetical protein TcasGA2_TC014275 [Tribolium castaneum] Length = 4075 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 70/233 (30%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + L A N + ++ + + + + Sbjct: 1833 KYYRAILERNFSFLSKGTTHANIPNLMNTMMELRKCCIHPYLLNGAEDQIQYDYKMAQGE 1892 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K+ ++ ++ K AN +++ L L+ + + Sbjct: 1893 DPDAYYKALINSSGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLMFRKYPFERI 1952 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I ++ + + G G+NL + ++ + W+ + Sbjct: 1953 DGRIRGNLRQAAIDRFSRPDSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2008 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V +Y L+ +NT + + + K + +L ++ Sbjct: 2009 --DLQAQARCHRIGQQKMVKIYRLLCRNTYEREMFDKASLKLGLDKAILQSMN 2059 >gi|237720473|ref|ZP_04550954.1| Snf2 family helicase [Bacteroides sp. 2_2_4] gi|229450224|gb|EEO56015.1| Snf2 family helicase [Bacteroides sp. 2_2_4] Length = 946 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 65/206 (31%), Gaps = 21/206 (10%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + L L F+ + ++ QL+ + +I Sbjct: 730 YEQEKNSLRNILLQHPQSTDRLHSFSVLNGILRLRQLSCHPQLILPDYTGTSGKTAQIIE 789 Query: 59 LEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + ++ +++ F L + A G T ++ ++ + Sbjct: 790 TFDTL-QSEGHKVLIFSSFVRHLEVLAEAFHERGWKYALLTGSTNNRPSEIAHFTDQKDV 848 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL + + WW+ E + R + G + V Y Sbjct: 849 QAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAYR 902 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I QN+I+E +L K + + + Sbjct: 903 FITQNSIEEKILHLQDEKRKLAETFV 928 >gi|255071819|ref|XP_002499584.1| SNF2 super family [Micromonas sp. RCC299] gi|226514846|gb|ACO60842.1| SNF2 super family [Micromonas sp. RCC299] Length = 1271 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 75/216 (34%), Gaps = 31/216 (14%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------DEK 55 Y + + + +G+ N+A ++ ++ N + + + + K Sbjct: 766 YRQVVKGTVTNTEGKVRVLQNTA---MQLRKVCNHPYLFLSDDLFYQPSGPEEILRASGK 822 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQE 103 + L+ I+ K + +++ L + + + + Sbjct: 823 FEILDRILPKLKRSGHRVLLFSQMVKCLDIIGDYLDWRKYTYLRLDGSTGTDARADLLDK 882 Query: 104 WNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N P + G GLNLQ + ++ F W+ + ++ R + G Sbjct: 883 FNAPDSPYFLFMLSTRAGGMGLNLQT-ADTVIIFDSDWNPQ-----MDAQAEDRAHRIGQ 936 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR V + ++ TI+E +L++ K I + A Sbjct: 937 KRRVKILTMVCDGTIEEDILRKANEKRAIDHKAIQA 972 >gi|52630322|ref|NP_005843.2| chromodomain-helicase-DNA-binding protein 3 isoform 2 [Homo sapiens] gi|119610520|gb|EAW90114.1| chromodomain helicase DNA binding protein 3, isoform CRA_a [Homo sapiens] gi|119610522|gb|EAW90116.1| chromodomain helicase DNA binding protein 3, isoform CRA_a [Homo sapiens] Length = 1966 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 994 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1053 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1054 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1113 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1114 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1167 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1168 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1209 >gi|327300603|ref|XP_003234994.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] gi|326462346|gb|EGD87799.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] Length = 1691 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1404 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1463 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1464 TVLDFQQRPEIFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1517 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1518 LGQTRQVTVYRLITRRTIEERIRKRALQKEEVQRVVISG 1556 >gi|221330583|ref|NP_001137761.1| kismet, isoform C [Drosophila melanogaster] gi|220901895|gb|ACL82968.1| kismet, isoform C [Drosophila melanogaster] Length = 5517 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 75/236 (31%), Gaps = 41/236 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L+ A N + ++ + + + + Sbjct: 2277 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2336 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 + K+ ++ ++ K AN +++ L L+ + + Sbjct: 2337 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERI 2396 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2397 DGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2452 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G ++ V +Y L+ +NT + + + K + +L ++ + Sbjct: 2453 --DLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQG 2506 >gi|198476743|ref|XP_001357465.2| GA17619 [Drosophila pseudoobscura pseudoobscura] gi|198137832|gb|EAL34535.2| GA17619 [Drosophila pseudoobscura pseudoobscura] Length = 5605 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 75/236 (31%), Gaps = 41/236 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L+ A N + ++ + + + + Sbjct: 2386 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2445 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 + K+ ++ ++ K AN +++ L L+ + + Sbjct: 2446 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERI 2505 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2506 DGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2561 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G ++ V +Y L+ +NT + + + K + +L ++ + Sbjct: 2562 --DLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQG 2615 >gi|195470194|ref|XP_002087393.1| GE16349 [Drosophila yakuba] gi|194173494|gb|EDW87105.1| GE16349 [Drosophila yakuba] Length = 5330 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 75/236 (31%), Gaps = 41/236 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L+ A N + ++ + + + + Sbjct: 2278 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2337 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 + K+ ++ ++ K AN +++ L L+ + + Sbjct: 2338 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERI 2397 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2398 DGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2453 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G ++ V +Y L+ +NT + + + K + +L ++ + Sbjct: 2454 --DLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQG 2507 >gi|195436658|ref|XP_002066274.1| GK18181 [Drosophila willistoni] gi|194162359|gb|EDW77260.1| GK18181 [Drosophila willistoni] Length = 5689 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 75/236 (31%), Gaps = 41/236 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L+ A N + ++ + + + + Sbjct: 2452 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2511 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 + K+ ++ ++ K AN +++ L L+ + + Sbjct: 2512 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERI 2571 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2572 DGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2627 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G ++ V +Y L+ +NT + + + K + +L ++ + Sbjct: 2628 --DLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQG 2681 >gi|194853302|ref|XP_001968138.1| GG24671 [Drosophila erecta] gi|190660005|gb|EDV57197.1| GG24671 [Drosophila erecta] Length = 5335 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 75/236 (31%), Gaps = 41/236 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L+ A N + ++ + + + + Sbjct: 2285 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2344 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 + K+ ++ ++ K AN +++ L L+ + + Sbjct: 2345 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERI 2404 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2405 DGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2460 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G ++ V +Y L+ +NT + + + K + +L ++ + Sbjct: 2461 --DLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQG 2514 >gi|194766405|ref|XP_001965315.1| GF24504 [Drosophila ananassae] gi|190617925|gb|EDV33449.1| GF24504 [Drosophila ananassae] Length = 3217 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 75/236 (31%), Gaps = 41/236 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L+ A N + ++ + + + + Sbjct: 2269 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKAQHGE 2328 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 + K+ ++ ++ K AN +++ L L+ + + Sbjct: 2329 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERI 2388 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2389 DGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2444 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G ++ V +Y L+ +NT + + + K + +L ++ + Sbjct: 2445 --DLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQG 2498 >gi|17986031|ref|NP_523441.1| kismet, isoform A [Drosophila melanogaster] gi|7230509|gb|AAF43004.1|AF215703_1 KISMET-L long isoform [Drosophila melanogaster] gi|22945599|gb|AAF51527.3| kismet, isoform A [Drosophila melanogaster] Length = 5322 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 75/236 (31%), Gaps = 41/236 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L+ A N + ++ + + + + Sbjct: 2277 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGE 2336 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 + K+ ++ ++ K AN +++ L L+ + + Sbjct: 2337 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERI 2396 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2397 DGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2452 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G ++ V +Y L+ +NT + + + K + +L ++ + Sbjct: 2453 --DLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQG 2506 >gi|323454254|gb|EGB10124.1| hypothetical protein AURANDRAFT_1751 [Aureococcus anophagefferens] Length = 421 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 65/177 (36%), Gaps = 27/177 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ 85 + + AN + + + K + L ++ K +++ + L L Sbjct: 258 LFTELRKAANHPLLLR-------LDNAKCERLRELLPKLKKEGHKVLLFSQWVRLLDLLG 310 Query: 86 KAFPQ----------GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILV 133 + + + ++N+ G + + + G G+NL G + ++ Sbjct: 311 LLCDDLDLNWSRLDGSTPITERQQLVADFNDPAGDLDVFLLSTRAGGLGINLT-GADTVI 369 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + ++ E I+R R + G + V VY L+A++T+D ++ K + Sbjct: 370 IHDVDFNPE-----IDRQAEDRAHRIGQTKPVTVYRLVAEDTVDRDIIDLANRKRAV 421 >gi|62898724|dbj|BAD97216.1| chromodomain helicase DNA binding protein 1-like variant [Homo sapiens] Length = 702 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 74/215 (34%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 192 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 251 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 252 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 311 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ ++ + R + G Sbjct: 312 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQD-----DLQAAARAHRIGQN 365 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 366 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 400 >gi|85090821|ref|XP_958601.1| hypothetical protein NCU07556 [Neurospora crassa OR74A] gi|28919976|gb|EAA29365.1| hypothetical protein NCU07556 [Neurospora crassa OR74A] Length = 1893 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 76/248 (30%), Gaps = 59/248 (23%) Query: 2 KQYHKF-QRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWK------- 49 K + F +RE + + + +L N + H + Sbjct: 1564 KLFEDFTKREAKKITEEAGRDDKEAKAHIFQALQYMRKLCNSPALVMKPGHKQYDDTQKF 1623 Query: 50 ----------EVHDEKIKALEVIIEKA-----------------NAAPIIVAYHFNSDLA 82 VH K+ AL ++ ++ L Sbjct: 1624 LAKRNTSLEDPVHAPKLTALRDLLVDCGIGVEGQESSDPLYTPIKPHRALIFCQMKEMLD 1683 Query: 83 RLQKAF-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 +Q + + ++N + +L + G GLNL G Sbjct: 1684 MVQNTVLKTMLPSVSHLRLDGSVDPTRRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT-G 1742 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R K Sbjct: 1743 ADTVIFVEHDWNPQK-----DLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKI 1797 Query: 189 TIQDLLLN 196 + ++N Sbjct: 1798 DVASTVVN 1805 >gi|326920472|ref|XP_003206496.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Meleagris gallopavo] Length = 1545 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 69/171 (40%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ------- 90 +K K+ AL++++ K+ +++ + L++ Sbjct: 1090 FIRIPDKESLITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMR 1149 Query: 91 ----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1150 LDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT---- 1204 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1205 -VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1254 >gi|298480485|ref|ZP_06998682.1| Snf2 family protein [Bacteroides sp. D22] gi|298273306|gb|EFI14870.1| Snf2 family protein [Bacteroides sp. D22] Length = 946 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 64/206 (31%), Gaps = 21/206 (10%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + L L F+ + ++ QL+ + +I Sbjct: 730 YEQEKNSLRNILLQHPQSTNRLHSFSVLNGILRLRQLSCHPQLILPDYTGTSGKTAQIIE 789 Query: 59 LEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + ++ +++ F L + A G T ++ + + Sbjct: 790 TFDTL-QSEGHKVLIFSSFVKHLEVLAEAFRERGWKYALLTGATNNRPSEIAHFTEQKDV 848 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL + + WW+ E + R + G + V Y Sbjct: 849 QAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAYR 902 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I QN+I+E +L K + + + Sbjct: 903 FITQNSIEEKILHLQDEKRKLAETFV 928 >gi|189458814|ref|NP_083492.2| chromodomain helicase DNA binding protein 5 isoform 2 [Mus musculus] Length = 1915 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 960 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 1019 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1020 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1079 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1080 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1133 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1134 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1175 >gi|123248483|emb|CAM23902.1| chromodomain helicase DNA binding protein 5 [Mus musculus] Length = 1946 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 960 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 1019 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1020 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1079 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1080 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1133 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1134 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1175 >gi|255931991|ref|XP_002557552.1| Pc12g07170 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582171|emb|CAP80344.1| Pc12g07170 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1665 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 59/157 (37%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1377 DSGKLAKLDQLLRELKPGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1436 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1437 TVSDFQSNPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1490 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1491 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVI 1527 >gi|109113157|ref|XP_001111066.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform 2 [Macaca mulatta] Length = 1981 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 976 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1035 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1036 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1095 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1096 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1149 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1150 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1191 >gi|195485258|ref|XP_002091017.1| GE12485 [Drosophila yakuba] gi|194177118|gb|EDW90729.1| GE12485 [Drosophila yakuba] Length = 1027 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QR+ Y + ++I+ N A K ++ + N + Sbjct: 366 KMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N L + G G+NL ++++ + W+ + ++ + Sbjct: 486 RNRQIQEFNMDNSAKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 539 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 540 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|195380475|ref|XP_002048996.1| GJ21345 [Drosophila virilis] gi|194143793|gb|EDW60189.1| GJ21345 [Drosophila virilis] Length = 714 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVK---------CLQLANGAVYY--------DEEKHW 48 K QRE Y L ++I+ N A K K + N + Sbjct: 375 KLQREWYTKLLLKDIDVVNGAGKIEKMRLQNILVHLRKCTNHPYLFDGAEPGPPYTTDEH 434 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDK 96 K+ L+ ++ + + +++ L L+ + Sbjct: 435 LVNDSGKMIILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCAWRNYNYCRLDGKTEHED 494 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N K + + G G+NL ++++ + W+ + ++ + Sbjct: 495 RNQMIQEYNMEKSTKFIFLLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 548 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ L+ +NT+DE +++R K + +++ A + Sbjct: 549 RAHRIGQKKQVRVFRLVTENTVDEKIVERAEVKLRLDRMVIQAGR 593 >gi|14042443|dbj|BAB55248.1| unnamed protein product [Homo sapiens] Length = 521 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 175 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 234 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L Q ++ I+ Sbjct: 235 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDIPQDYMDYRGYSYERVDGSVRGEERHLAIK 294 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 295 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 348 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 349 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 383 >gi|316969354|gb|EFV53467.1| DNA repair protein Rhp54 [Trichinella spiralis] Length = 328 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 81/239 (33%), Gaps = 49/239 (20%) Query: 1 MKQYHKFQ--RELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEE----------- 45 MK Y +F + + L+ + + +L N E+ Sbjct: 3 MKLYERFLNSKTMASQLRDACTGNMPSKALALITNLKKLCNHPALIYEKCIEKTDGFENC 62 Query: 46 -----------KHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAF--- 88 K + K++ L+ ++ +++ ++ L ++ Sbjct: 63 SDLFPPGFSVKKQIRPEWSGKMRVLDGLLAYVKANTDDKVVLVSNYTQTLDLFEQLCILR 122 Query: 89 -------PQGRTLDKDPCTIQEWNEGKI----PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T K + ++N+ ++ + + G GLNL G N LV F Sbjct: 123 NYGFVRLDGSMTKKKRAKIVADFNDPQVGNSTFVFMLSSKAGGCGLNL-IGANRLVMFDP 181 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G K+ F+Y L+A +I+E + QR K + +++ Sbjct: 182 DWNPAN-----DGQAMARVWRDGQKKICFIYRLLATGSIEEKIFQRQTHKKALSSCVVD 235 >gi|312374256|gb|EFR21846.1| hypothetical protein AND_16272 [Anopheles darlingi] Length = 1024 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 82/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QRE Y + ++I+ N A K ++ + N + + Sbjct: 369 KMQREWYTKILMKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDYH 428 Query: 49 KEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQG----------RTLDK 96 + K+ L+ ++ K +++ L L+ + Sbjct: 429 LLENSGKMVVLDKLLRKLQEQESRVLIFSQMTRMLDILEDFCHWRGYHYCRLDGQTPHED 488 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I ++N + + G G+NL ++++ + W+ + ++ + Sbjct: 489 RSNMIADYNAPDSKKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 542 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI +NT++E +++R K + L++ + Sbjct: 543 RAHRIGQKKQVRVFRLITENTVEEKIVERAEVKLKLDKLVIQQGR 587 >gi|224052526|ref|XP_002188227.1| PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 6 [Taeniopygia guttata] Length = 1449 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 67/221 (30%), Gaps = 39/221 (17%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------------VH 52 +E+Y L G+ ++ N + + + Sbjct: 740 KEVYQILNGD----MQILLGLSTLRKICNHPDFVADSPRILKSVPDAEAEDPNQFGYWKR 795 Query: 53 DEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDPCT 100 K+ +E ++ ++ F + Sbjct: 796 SGKMIVVESLLKIWHKQGHRVLFFTQSRQMMQILEVFVRYRNYSYLRMDGTTAVASRQPL 855 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++N + I L G G+NL G + ++ + W+ ++ R + Sbjct: 856 VTKYNEDKSIFLFLLTTRVGGIGVNL-VGADRVIIYDPDWNPS-----VDTQARERAWRI 909 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G K+ V VY L+ TI+E + R K + + +L K+ Sbjct: 910 GQKKEVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQ 950 >gi|195386402|ref|XP_002051893.1| GJ17250 [Drosophila virilis] gi|194148350|gb|EDW64048.1| GJ17250 [Drosophila virilis] Length = 5552 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 74/233 (31%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L+ A N + ++ + + + + Sbjct: 2460 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKAQHGE 2519 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 + K+ ++ ++ K AN +++ L L+ + + Sbjct: 2520 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERI 2579 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2580 DGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2635 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V +Y L+ +NT + + + K + +L ++ Sbjct: 2636 --DLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMN 2686 >gi|195035285|ref|XP_001989108.1| GH10228 [Drosophila grimshawi] gi|193905108|gb|EDW03975.1| GH10228 [Drosophila grimshawi] Length = 5820 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 74/233 (31%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L+ A N + ++ + + + + Sbjct: 2557 KYYRGILEQNFSFLKKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKAQHGE 2616 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 + K+ ++ ++ K AN +++ L L+ + + Sbjct: 2617 DPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERI 2676 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2677 DGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2732 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V +Y L+ +NT + + + K + +L ++ Sbjct: 2733 --DLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMN 2783 >gi|56757896|gb|AAW27088.1| SJCHGC06070 protein [Schistosoma japonicum] Length = 319 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 18/179 (10%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL---- 81 + K Q Y KI+ L + K + I++ F L Sbjct: 57 QVHKLCQFYEVLSPYTLSSDAIISGSGKIEWLNENLPKLISEGHRILIFSQFVIMLDILE 116 Query: 82 ------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 R + + I +N I + + G G+NL G + ++ Sbjct: 117 EFLRITNRRYIRMDGSTPVSERQTLIDRFNSSSIEVFLLSTRAGGLGINLT-GADTVIIH 175 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + ++ +R R + G K V V LI++ T++E +L+ K ++ + Sbjct: 176 DIDFNP-----YNDRQAEDRCHRLGQKNPVHVIRLISEGTLEEGMLRIASEKLQMEQNV 229 >gi|225557945|gb|EEH06230.1| lymphocyte-specific helicase [Ajellomyces capsulatus G186AR] Length = 862 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 75/221 (33%), Gaps = 28/221 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------DEKI 56 + ++ L I + + ++ N + H K+ Sbjct: 558 ERIEKAKTAQLAKREIASKKLQNPVMQARLACNSPHNFYWPWGDDPSHIDDTLITSSGKM 617 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQE 103 L+ +I + I++ F + L + IQ Sbjct: 618 LLLDRLIPCLISKGHKILIFSQFKTQLDLLQDYASYLRGWNCCRIDGAVSQVDRQAQIQA 677 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + G G+NL + ++ F W+ ++ + R + G Sbjct: 678 FNTDPDYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQT 731 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 732 KPVIVYRLATRGTVEQTLLEKADSKRRLEKLVIQKGKFKSL 772 >gi|327300239|ref|XP_003234812.1| hypothetical protein TERG_03864 [Trichophyton rubrum CBS 118892] gi|326462164|gb|EGD87617.1| hypothetical protein TERG_03864 [Trichophyton rubrum CBS 118892] Length = 777 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 79/220 (35%), Gaps = 27/220 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-------KHWKEVHDEKIK 57 + +R L + I + + ++ + N + + K+ Sbjct: 477 DEIERAKTMKLAKKEISSKKLQNPVMQARLVCNSPLNFYWPWGEDSGVDSTLITSSGKML 536 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT------------LDKDPCTIQE 103 L+ ++ + +++ F L L+ Q R+ D+ Sbjct: 537 LLDRLVPCLISKGHKVLIFSQFKGQLDILEDWATQLRSWNCCRIDGAIAQADRQEQINAF 596 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N+ + + G G+NL + ++ F W+ ++ + R + G + Sbjct: 597 NNDPDYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTK 650 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V VY L + TI++ +L+R +K ++ L++ K +++ Sbjct: 651 PVIVYRLATRGTIEQTLLERAGSKRRLEKLVIQKGKFKSL 690 >gi|260172512|ref|ZP_05758924.1| Snf2 family helicase [Bacteroides sp. D2] gi|315920805|ref|ZP_07917045.1| Snf2 family helicase [Bacteroides sp. D2] gi|313694680|gb|EFS31515.1| Snf2 family helicase [Bacteroides sp. D2] Length = 946 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 65/206 (31%), Gaps = 21/206 (10%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + L L F+ + ++ QL+ + +I Sbjct: 730 YEQEKNSLRNILLQHPQSTDRLHSFSVLNGILRLRQLSCHPQLILPDYTGTSGKTAQIIE 789 Query: 59 LEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + ++ +++ F L + A G T ++ ++ + Sbjct: 790 TFDTL-QSEGHKVLIFSSFVRHLEVLAEAFHERGWKYALLTGSTNNRPSEIAHFTDQKDV 848 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL + + WW+ E + R + G + V Y Sbjct: 849 QAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAYR 902 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I QN+I+E +L K + + + Sbjct: 903 FITQNSIEEKILHLQDEKRKLAETFV 928 >gi|168042528|ref|XP_001773740.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp. patens] gi|162674996|gb|EDQ61497.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp. patens] Length = 1791 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 27/227 (11%), Positives = 68/227 (29%), Gaps = 40/227 (17%) Query: 4 YHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDE----------------- 44 Y L + + N + ++ ++ N D Sbjct: 974 YKAILENNVASLLKGSSTSNLPNLRNVAMELRKVCNHPFLCDGLEDSLTAKLRSNANDSN 1033 Query: 45 -EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 + + K+ ++ ++ K +++ F L L+ + Sbjct: 1034 ASGNLLQNSSGKMILVDKLLPKLKDAGRRVLIFSQFTIMLDLLEDYMIMKGYSYERIDGK 1093 Query: 98 ------PCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I + + I + + G G+ L + + + W+ + + Sbjct: 1094 IRGSERQAAIDRYSAKDSDIFVFLLSTRAGGLGITLTA-ADTCIIYDSDWNPQN-----D 1147 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + V +Y LI +NT +E + + K + + +L Sbjct: 1148 LQAMARCHRIGQTKDVKIYRLITRNTYEERLFECSSRKYGLDEAILG 1194 >gi|83715974|ref|NP_001032909.1| chromodomain-helicase-DNA-binding protein 1-like [Bos taurus] gi|122139236|sp|Q3B7N1|CHD1L_BOVIN RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like gi|78174364|gb|AAI07535.1| Chromodomain helicase DNA binding protein 1-like [Bos taurus] gi|296489521|gb|DAA31634.1| chromodomain-helicase-DNA-binding protein 1-like [Bos taurus] Length = 897 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 290 KYYKAILMKDLDAFENETAKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASG 349 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 350 KLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIK 409 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + G G+NL + ++FF ++ + + R + G Sbjct: 410 NFGQQPIFTFLLSTRAGGVGMNLTA-ADTVIFFDSDFNPQN-----DLQAAARAHRIGQN 463 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + + ++ Sbjct: 464 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIEG 498 >gi|320587436|gb|EFW99916.1| DNA repair and recombination protein rad54 [Grosmannia clavigera kw1407] Length = 809 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 67/217 (30%), Gaps = 44/217 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N E K W ++ + Sbjct: 511 LKAINILKKLCNHPDLLNLADDLPGSERCCPDDYVAKEARGRDREVKPWYSGKMMVLERM 570 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I I++ ++ S L ++ + K + +N+ Sbjct: 571 LARIRAETNDKIVLISNYTSTLDLFERLCRNRAYGCLRLDGTMNVSKRQKLVDRFNDPDG 630 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 631 SEFIFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 684 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 Y IA TI+E + QR K ++ +++A + + Sbjct: 685 YRFIATGTIEEKIFQRQSHKQSLSTCVVDAAAGDDVE 721 >gi|50285639|ref|XP_445248.1| hypothetical protein [Candida glabrata CBS 138] gi|49524552|emb|CAG58154.1| unnamed protein product [Candida glabrata] Length = 1115 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 81/223 (36%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEKH 47 Q++ Y + ++I+A N+ + ++ + N + Sbjct: 415 MQKKWYRQILEKDIDAVNADSGSKESKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDE 474 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 + EK+K L+ ++ K + +++ + L L+ + Sbjct: 475 HLVYNSEKLKVLDKLLRKLKEAGSRVLIFSQMSRVLDILEDYCYFREYEYCRIDGSTAHE 534 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I E+N L + G G+NL +++V F W+ + + + Sbjct: 535 DRIEAIDEYNAPDSKKFLFLLTTRAGGLGINLTT-ADVVVLFDSDWNPQA-----DLQAM 588 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V V+ + N+++E +L+R K + L++ Sbjct: 589 DRAHRIGQKKQVRVFRFVTDNSVEEKILERATQKLRLDQLVIQ 631 >gi|323451192|gb|EGB07070.1| hypothetical protein AURANDRAFT_28341 [Aureococcus anophagefferens] Length = 396 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 70/226 (30%), Gaps = 36/226 (15%) Query: 2 KQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 + Y + L G ++ + + ++ + N + + Sbjct: 177 RYYRALYEKNVTMLAGGGRAVDGPSMMNLAMELRKCCNHPFLLKGVEFRELESSGHGVAE 236 Query: 55 ---------KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA----------FPQGRT 93 K++ ++ I+ K ++V F L L+ G T Sbjct: 237 VDRLVDACGKLQFMDKILPKLFDEQRKVLVFSQFTMMLNVLEDYLRARAVVYGRIDGGVT 296 Query: 94 LDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I +++ L+ + G G+NL + ++ + W+ + + Sbjct: 297 GRDRQRQIDAFSDAGSKMRLMLLSTRAGGVGINLVA-ADTVIIYDSDWNPQN-----DVQ 350 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V VY L+ T + + K + +L+ Sbjct: 351 AMARCHRIGQTKKVTVYRLLTAKTYEAHMYDVATAKLDLDRAVLDG 396 >gi|148682990|gb|EDL14937.1| mCG131426 [Mus musculus] Length = 1955 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 63/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYH-KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y R + + + + N + + Sbjct: 969 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 1028 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1029 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1088 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1089 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1142 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1143 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1184 >gi|320031640|gb|EFW13600.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira] Length = 1123 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 78/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 434 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 493 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ +++ K + +++ + L L+ + Sbjct: 494 VDNAGKMVILDKLLKRLKNQGSRVLIFSQMSRVLDILEDYCVFREHAYCRIDGSTAHEDR 553 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N + + + G G+NL +I++ + W+ + + + R Sbjct: 554 IAAIDDYNRPESDKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 607 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 608 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 653 >gi|2645433|gb|AAB87383.1| CHD3 [Homo sapiens] Length = 1944 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 994 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1053 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1054 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1113 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1114 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1167 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1168 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1209 >gi|302510487|ref|XP_003017195.1| hypothetical protein ARB_04072 [Arthroderma benhamiae CBS 112371] gi|291180766|gb|EFE36550.1| hypothetical protein ARB_04072 [Arthroderma benhamiae CBS 112371] Length = 1541 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1254 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1313 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1314 TVLDFQQRPEIFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1367 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1368 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1406 >gi|148342542|gb|ABQ59048.1| CHD1L protein [Homo sapiens] Length = 900 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 74/215 (34%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 291 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 350 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K++ L+ ++ + +++ L LQ ++ I+ Sbjct: 351 KLQLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 410 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 411 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 464 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 465 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 499 >gi|113676533|ref|NP_001038584.1| INO80 complex homolog 1 [Danio rerio] gi|56207300|emb|CAI20655.1| novel protein similar to H.sapiens INOC1, INO80 complex homolog 1 (S. cerevisiae) (INOC1) [Danio rerio] Length = 1552 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 71/182 (39%), Gaps = 19/182 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 + Q + +K K+ L++++ K+ +++ + L++ Sbjct: 1074 VMALQQRHGWSFIRIPDKESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEE 1133 Query: 87 AFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + ++ + I + + G G+NL + ++F+ Sbjct: 1134 YMVYRKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTA-ADTVIFY 1192 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +++ + R + G + V VY LI + TI+E +LQR + KS IQ +++ Sbjct: 1193 DSDWNPT-----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVI 1247 Query: 196 NA 197 + Sbjct: 1248 SG 1249 >gi|190346466|gb|EDK38558.2| hypothetical protein PGUG_02656 [Meyerozyma guilliermondii ATCC 6260] Length = 1224 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 75/225 (33%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y + + + E A + K ++ ++ N ++E + Sbjct: 721 LYQQMLKHNALFVGAEVGSAKSGIKGLNNKIMQLRKICNHPFVFEEVEDVLNPSRMTNNS 780 Query: 53 ----DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ ++ K + +++ + S + ++ Sbjct: 781 IWRSSGKFELLDRVLPKFKASGHRVLLFFQMTSVMDIMEDFLRLRNMKYLRLDGATKAED 840 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 841 RQEMLKLFNAPGSEYFCFLLSTRAGGLGLNLQS-ADTVIIFDTDWNPHQ-----DLQAQD 894 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++E++L+R K I ++ A K Sbjct: 895 RAHRIGQKNEVRILRLITNESVEEVILERAHQKLDIDGKVIQAGK 939 >gi|164425176|ref|XP_962568.2| hypothetical protein NCU06306 [Neurospora crassa OR74A] gi|157070819|gb|EAA33332.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 857 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 72/213 (33%), Gaps = 28/213 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVH------DEKI 56 + +R DL + I + ++ + N Y + + K+ Sbjct: 559 EEIKRAQTLDLAKKEISNKKLGNPLMQLRLVCNSPHNFYNPWSNSDQPIDESIVTASGKM 618 Query: 57 KALEVIIEK--ANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQE 103 L+ ++ I++ F + G D I++ Sbjct: 619 LLLDRLLPALFERGHKILIFSQFKTQLDILEEYCRELRSWDVCRIDGGVAQDDRRAQIEQ 678 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + + G G+NL + ++ F W+ ++ + R + G Sbjct: 679 FNTDPDVKIFLLSTRAGGQGINL-ASADTVILFDSDWNPQQ-----DLQAQDRCHRIGQT 732 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V VY L + T++E +L K ++ L++ Sbjct: 733 RPVVVYRLATKGTVEEELLMSADAKRRLEKLVI 765 >gi|109113159|ref|XP_001110923.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform 1 [Macaca mulatta] Length = 1947 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 976 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1035 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1036 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1095 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1096 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1149 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1150 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1191 >gi|55963369|emb|CAI11899.1| novel protein containing an SNF2 family N-terminal domain and a Helicase conserved C-terminal domain [Danio rerio] Length = 1582 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 71/182 (39%), Gaps = 19/182 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 + Q + +K K+ L++++ K+ +++ + L++ Sbjct: 1107 VMALQQRHGWSFIRIPDKESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEE 1166 Query: 87 AFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + ++ + I + + G G+NL + ++F+ Sbjct: 1167 YMVYRKHTYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTA-ADTVIFY 1225 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +++ + R + G + V VY LI + TI+E +LQR + KS IQ +++ Sbjct: 1226 DSDWNPT-----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVI 1280 Query: 196 NA 197 + Sbjct: 1281 SG 1282 >gi|160883987|ref|ZP_02064990.1| hypothetical protein BACOVA_01961 [Bacteroides ovatus ATCC 8483] gi|156110717|gb|EDO12462.1| hypothetical protein BACOVA_01961 [Bacteroides ovatus ATCC 8483] Length = 946 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 65/206 (31%), Gaps = 21/206 (10%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + L L F+ + ++ QL+ + +I Sbjct: 730 YEQEKNSLRNILLQHPQSTDRLHSFSVLNGILRLRQLSCHPQLILPDYTGTSGKTAQIIE 789 Query: 59 LEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + ++ +++ F L + A G T ++ ++ + Sbjct: 790 TFDTL-QSEGHKVLIFSSFVRHLEVLAEAFHERGWKYALLTGSTNNRPSEIAHFTDQKDV 848 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL + + WW+ E + R + G + V Y Sbjct: 849 QAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAYR 902 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I QN+I+E +L K + + + Sbjct: 903 FITQNSIEEKILHLQDEKRKLAETFV 928 >gi|49022903|dbj|BAC41410.3| mKIAA0308 protein [Mus musculus] Length = 1890 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 128 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 187 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 188 SASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 247 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 248 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 304 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 305 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNV 361 >gi|327264196|ref|XP_003216901.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Anolis carolinensis] Length = 887 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------EKHWKEVHDE 54 K Y + + E + + ++ + ++ Sbjct: 277 KFYKAILTKDLDAFENETGKKARLQNVLIQLRKCVAHPYLFNGVEPEPFVIGDHLIEVSG 336 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ A +++ + L LQ ++ I+ Sbjct: 337 KLNLLDNLLAFLYAGGHRVLLFSQMTNMLDILQDYMDYRGYSYERLDGSVRGEERHLAIK 396 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + +VF ++ + + + R + G Sbjct: 397 NFGQQPIFVFLLSTRAGGVGMNLTS-ADTVVFVDNDFNPQN-----DLQAIARAHRIGQN 450 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V + LI ++TI+E++ +R +K + + ++ Sbjct: 451 KPVKIIRLIGRDTIEEIIYRRAASKLQLTNTIIEG 485 >gi|297663856|ref|XP_002810379.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform 1 [Pongo abelii] Length = 903 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 293 KYYKAILMKDLDAFENEMAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASG 352 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 353 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 412 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 413 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 466 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 467 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 501 >gi|189237363|ref|XP_970443.2| PREDICTED: similar to kismet CG3696-PA [Tribolium castaneum] Length = 4044 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 70/233 (30%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + L A N + ++ + + + + Sbjct: 1802 KYYRAILERNFSFLSKGTTHANIPNLMNTMMELRKCCIHPYLLNGAEDQIQYDYKMAQGE 1861 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K+ ++ ++ K AN +++ L L+ + + Sbjct: 1862 DPDAYYKALINSSGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLMFRKYPFERI 1921 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I ++ + + G G+NL + ++ + W+ + Sbjct: 1922 DGRIRGNLRQAAIDRFSRPDSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 1977 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V +Y L+ +NT + + + K + +L ++ Sbjct: 1978 --DLQAQARCHRIGQQKMVKIYRLLCRNTYEREMFDKASLKLGLDKAILQSMN 2028 >gi|168012021|ref|XP_001758701.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162690311|gb|EDQ76679.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1220 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 78/225 (34%), Gaps = 30/225 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD----------EEKHWKEVHD 53 Y + Y L + + + ++ +L + E + Sbjct: 558 YKAILTKNYQILAKQGGPQVSLTNVVMELRKLCGHPYLLEGVEPTVRNQAEANRQLLENS 617 Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTI 101 K+ L+ ++ K + +++ F L L+ + + I Sbjct: 618 GKLLLLDKMMTKLHAQGHRVLIYSQFTRMLDILEDWLHLKKWGYERIDGKISGSERQIRI 677 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + G G+NL + ++ + W+ + + R + Sbjct: 678 DRYNAPNSTKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAHRL 731 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G + V ++ L+ + TI+E ++Q + K ++ L++ +KKE I+ Sbjct: 732 GQQNKVMIFRLVTRGTIEERMMQMTKKKMVLEHLVVGRMKKENIN 776 >gi|125543874|gb|EAY90013.1| hypothetical protein OsI_11583 [Oryza sativa Indica Group] Length = 1411 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 69/172 (40%), Gaps = 19/172 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---- 90 + + + K++ L++++ + A +++ L L+ Sbjct: 1076 SSPPMSNFDPAKMLTDSGKLQTLDILLRRLRAENHRVLLFAQMTKMLDILEDYMNFRKFK 1135 Query: 91 -------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 D+ N I + + G G+NL + ++F+ + W+ + Sbjct: 1136 YFRLDGSSAISDRRDMVRDFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYEIDWNPTQ 1194 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q + R + G + V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1195 DQ-----QAMDRTHRLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVM 1241 >gi|67523659|ref|XP_659889.1| hypothetical protein AN2285.2 [Aspergillus nidulans FGSC A4] gi|74681303|sp|Q5BAZ5|INO80_EMENI RecName: Full=Putative DNA helicase ino80 gi|40745240|gb|EAA64396.1| hypothetical protein AN2285.2 [Aspergillus nidulans FGSC A4] gi|259487678|tpe|CBF86533.1| TPA: Putative DNA helicase ino80 (EC 3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BAZ5] [Aspergillus nidulans FGSC A4] Length = 1612 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1319 DSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1378 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1379 TVADFQQRPDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1432 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI ++TI+E + +R K +Q ++++ Sbjct: 1433 LGQTRQVTVYRLITRSTIEERIRKRALQKEEVQRVVISG 1471 >gi|119596386|gb|EAW75980.1| chromodomain helicase DNA binding protein 6, isoform CRA_g [Homo sapiens] Length = 1875 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 74/235 (31%), Gaps = 40/235 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD------ 53 K Y + + L N + ++ + N +EEK ++ Sbjct: 32 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINEEKILEDFRKTHSPDA 91 Query: 54 ------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-- 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 92 PDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERID 151 Query: 98 --------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I + + + + G G+NL + + F W+ + Sbjct: 152 GRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN---- 206 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 207 -DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 260 >gi|322711378|gb|EFZ02951.1| chromatin remodelling complex ATPase chain ISW1 [Metarhizium anisopliae ARSEF 23] Length = 1056 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 75/224 (33%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + G+ + ++ + N + Sbjct: 366 VKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 425 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ G + Sbjct: 426 VYNAGKMAVLDKLLVRLQKQGSRVLIFSQMSRLLDILEDYCVFRDYKYCRIDGGTAHEDR 485 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I++ + W+ + + + R Sbjct: 486 IAAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVILYDSDWNPQA-----DLQAMDR 539 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY + N I+E VL+R K + L++ + Sbjct: 540 AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQQGR 583 >gi|311258350|ref|XP_003127574.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Sus scrofa] Length = 1641 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 63/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYH-KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y R + + + + N + + Sbjct: 560 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 619 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 620 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 679 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 680 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 733 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 734 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 775 >gi|293343243|ref|XP_002725430.1| PREDICTED: Chd9 protein-like isoform 2 [Rattus norvegicus] Length = 2876 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1107 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKIIGEFRDTYNP 1166 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1167 SASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1226 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1227 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1283 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1284 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNV 1340 >gi|303312905|ref|XP_003066464.1| Chromatin remodeling complex ATPase chain Iswi, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106126|gb|EER24319.1| Chromatin remodeling complex ATPase chain Iswi, putative [Coccidioides posadasii C735 delta SOWgp] Length = 1123 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 78/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 434 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 493 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ +++ K + +++ + L L+ + Sbjct: 494 VDNAGKMVILDKLLKRLKNQGSRVLIFSQMSRVLDILEDYCVFREHAYCRIDGSTAHEDR 553 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N + + + G G+NL +I++ + W+ + + + R Sbjct: 554 IAAIDDYNRPESDKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 607 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 608 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 653 >gi|119498495|ref|XP_001266005.1| RSC complex subunit (Sth1), putative [Neosartorya fischeri NRRL 181] gi|119414169|gb|EAW24108.1| RSC complex subunit (Sth1), putative [Neosartorya fischeri NRRL 181] Length = 1405 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 + Y + + + D +G ++ ++ +L N ++ + Sbjct: 782 RLYKQLVTHNKMVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEPVEDQMNPGRGTNDL 841 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 842 IWRTAGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 901 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 902 RSDLLKLFNAPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQ-----DLQAQD 955 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 956 RAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1000 >gi|293343241|ref|XP_002725429.1| PREDICTED: Chd9 protein-like isoform 1 [Rattus norvegicus] Length = 2867 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1107 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKIIGEFRDTYNP 1166 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1167 SASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1226 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1227 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1283 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1284 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNV 1340 >gi|17508659|ref|NP_492438.1| RADiation sensitivity abnormal/yeast RAD-related family member (rad-54) [Caenorhabditis elegans] gi|6580237|emb|CAB63308.1| C. elegans protein W06D4.6, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|6580248|emb|CAA22254.2| C. elegans protein W06D4.6, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 818 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 81/237 (34%), Gaps = 47/237 (19%) Query: 3 QYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------------- 44 Y+K +++ + + A ++ S +L N + Sbjct: 472 LYNKLIECEKQNRIVEKDKGATA-SALSFITHLKKLCNHPYLVYDEFQKPDNRFRNKCLS 530 Query: 45 -------EKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAF------ 88 K + K+K L+ I+ K ++ ++ + + + Sbjct: 531 IFPESFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMELCKLRGYD 590 Query: 89 ----PQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 ++ + + +N+ I + G GLNL G N LV F W+ Sbjct: 591 FVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNL-IGANRLVMFDPDWNPA 649 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + R + G K+ F+Y L+A +I+E + QR K + +++A + Sbjct: 650 N-----DDQAMARVWRDGQKKMCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAGE 701 >gi|293400916|ref|ZP_06645061.1| SWF/SNF family helicase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305942|gb|EFE47186.1| SWF/SNF family helicase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 1107 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 25/220 (11%) Query: 2 KQY----HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y + + L LQ E + F + + Q+ E K+ Sbjct: 885 KLYLANLSQVNQALSKHLQMERPDKFAILAMLTRLRQICCEPRILYEN---ITTASSKLL 941 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 ++E + N +++ F S L L++ + T + +Q++ Sbjct: 942 YCLDLLETLRENHQRVLLFSSFTSVLDILEEELIKRRFSYLKLTGNNTKQQRRDMVQQFQ 1001 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + G GLNL + ++ F WW++ R + G + V Sbjct: 1002 NGLTDVFLISLKAGGTGLNLTA-ASAVIHFDPWWNVSAQ-----NQATDRAYRIGQNQNV 1055 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VY LI +++I+E + + K + D + + H+ Sbjct: 1056 QVYKLIMKDSIEEKIQTLQKMKKDLSDHFVEENEGSIYHM 1095 >gi|297663858|ref|XP_002810380.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform 2 [Pongo abelii] Length = 696 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 86 KYYKAILMKDLDAFENEMAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASG 145 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 146 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 205 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 206 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 259 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 260 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 294 >gi|319936092|ref|ZP_08010514.1| SWF/SNF family helicase [Coprobacillus sp. 29_1] gi|319808879|gb|EFW05397.1| SWF/SNF family helicase [Coprobacillus sp. 29_1] Length = 1069 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 21/204 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE- 64 + + L L + + + + QL + E E K+K +I Sbjct: 855 QVNKSLQEKLDIHQLGRIDILAMLTRLRQLCQDSRLLYET---VEEPSSKLKGCMELIHS 911 Query: 65 -KANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIPLLF 113 K N I++ F S L +++ + K + + + + L Sbjct: 912 LKENHKKILLFSSFTSVLHLIEEQCHKEHISYYLLDGSISKEKRKKMVDAFQKDETTLFL 971 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL ++ F WW++ R + G K AV V+ LI + Sbjct: 972 ISLKAGGAGLNLTS-AQAVIHFDPWWNMSAK-----NQATDRAHRIGQKEAVQVFSLIMK 1025 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 N+I+E ++ K + D + Sbjct: 1026 NSIEEKIMDLQNQKKNLADTFVEG 1049 >gi|254568884|ref|XP_002491552.1| Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesion [Pichia pastoris GS115] gi|238031349|emb|CAY69272.1| Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesion [Pichia pastoris GS115] gi|328351939|emb|CCA38338.1| DNA excision repair protein ERCC-6 [Pichia pastoris CBS 7435] Length = 1088 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 64/232 (27%), Gaps = 41/232 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------D 53 Y KF R +L ++ N D + Sbjct: 594 LYEKFLRS--DELSRILQGKRQVLYGIDILRKICNHPDLVDVHAKRRSKKDPTYGSASKS 651 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLAR----------------------LQKAFP 89 K++ ++ ++ K+ ++ L + Sbjct: 652 GKMQVVKKLLELWKSQGHKTLLFTQTRQMLDILESFLERLNAKGAEEEDFVPFKFLRMDG 711 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + N+ + G G+NL G N ++ + W+ + Sbjct: 712 TTSIGVRQSLVDVFNNDPSYNVFLLTTRVGGLGVNLT-GANRVIIYDPDWNPST-----D 765 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G K+ V +Y L+ +I+E + R K + + +L K+ Sbjct: 766 VQARERAWRLGQKKDVTIYRLMIAGSIEEKIYHRQIFKQFLTNKILKDPKQR 817 >gi|46127169|ref|XP_388138.1| hypothetical protein FG07962.1 [Gibberella zeae PH-1] Length = 856 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N E K W + + Sbjct: 562 LKAINILKKLCNHPDLLNMSDDLPGSEKCYPDDYVPKEARGRDREVKSWYSGKMAVLDRM 621 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ S L +K ++K + +N+ + Sbjct: 622 LARIRQDTNDKIVLISNYTSTLDLFEKLCRSRQYGSLRLDGTMNVNKRQKLVDRFNDPEG 681 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 682 DEFIFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 735 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 736 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 767 >gi|311268329|ref|XP_003132000.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2 [Sus scrofa] Length = 2002 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 994 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1053 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1054 ALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1113 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1114 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1167 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1168 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1209 >gi|320581104|gb|EFW95326.1| transcriptional accessory protein [Pichia angusta DL-1] Length = 1878 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 83/250 (33%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----- 50 + Y F ++ +++ E+ + +L N A KH + Sbjct: 1547 QLYKDFIKKQKTNVEKDLHASDESQSKQHIFQALQYMRKLCNHAALVLTPKHPQYNDVMK 1606 Query: 51 ------------VHDEKIKALEVIIEKA------------------NAAPIIVAYHFNSD 80 H K+ +L+ ++ + + ++ Sbjct: 1607 YLKTYDMDIRDIEHSPKLMSLKNLLLECGIGSDGGQKGVIPAENVISQHRALIFCQMKDM 1666 Query: 81 LARLQKAFPQGRTL-------------DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L ++ + K ++++N + I +L G GLNL Sbjct: 1667 LDMVENDLLKKHMPGVTYLRLDGSTEPRKRQDVVRKFNNDPSIDVLLLTTKVGGLGLNLT 1726 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ M + + R + G K+ V VY LI ++T++E ++ + Sbjct: 1727 -GADTVIFVEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRLITKDTLEEKIMGLQKF 1780 Query: 187 KSTIQDLLLN 196 K I ++N Sbjct: 1781 KMNIASTIIN 1790 >gi|168051599|ref|XP_001778241.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162670338|gb|EDQ56908.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1245 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 77/225 (34%), Gaps = 30/225 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD----------EEKHWKEVHD 53 Y + Y L + + + ++ +L + E + Sbjct: 558 YKAILTKNYQILAKQGGPQVSLTNVVMELRKLCGHPYLLEGVEPTVRNQAEANRQLLENS 617 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTI 101 K+ L+ ++ + +++ F L L+ + + I Sbjct: 618 GKLLLLDKMMTKLHSQGHRVLIYSQFTRMLDILEDWLHLKKWGYERIDGKISGSERQIRI 677 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + G G+NL + ++ + W+ + + R + Sbjct: 678 DRYNSPNSTKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAHRL 731 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G + V ++ L+ + TI+E ++Q + K ++ L++ +KKE I+ Sbjct: 732 GQQNKVMIFRLVTRGTIEERMMQMTKKKMVLEHLVVGRMKKENIN 776 >gi|225557800|gb|EEH06085.1| DNA ATP-dependent helicase [Ajellomyces capsulatus G186AR] Length = 1676 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1379 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1438 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1439 TVLDFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1492 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI + TI+E + +R K +Q ++++ Sbjct: 1493 LGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1531 >gi|294655844|ref|XP_002770188.1| DEHA2C08294p [Debaryomyces hansenii CBS767] gi|199430649|emb|CAG86104.4| DEHA2C08294p [Debaryomyces hansenii] Length = 1034 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 84/226 (37%), Gaps = 38/226 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK----------TVKCLQLANGAVYYDEEK--------H 47 QR+ Y + ++I+A N A+K ++ + N ++ + Sbjct: 396 DMQRKWYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPFTTDE 455 Query: 48 WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LD 95 + +K+ L+ ++ K + +++ + L ++ Sbjct: 456 HLVYNSQKMIILDKLLKKFKQEGSRVLIFSQMSRMLDIMEDYCMFRDYEYCRIDGQTDHA 515 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I E+NE + + G G+NL +I++ F W+ + + + Sbjct: 516 DRVNAIDEYNEPGSSKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQA-----DLQAM 569 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V V+ +++N I+E VL+R K + L++ + Sbjct: 570 DRAHRIGQTKQVRVFRFVSENAIEEKVLERATQKLRLDQLVIQQGR 615 >gi|327276403|ref|XP_003222959.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like isoform 2 [Anolis carolinensis] Length = 2876 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 70/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1104 KYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNP 1163 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K+ +++ L L+ R L + Sbjct: 1164 SAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1223 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1224 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1280 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY LI +N+ + + R K + +L ++ V Sbjct: 1281 ---DLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSV 1337 >gi|293355127|ref|XP_002728634.1| PREDICTED: rCG44314-like [Rattus norvegicus] Length = 2802 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1107 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKIIGEFRDTYNP 1166 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1167 SASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1226 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1227 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1283 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1284 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNV 1340 >gi|225678415|gb|EEH16699.1| lymphoid specific helicase variant3 [Paracoccidioides brasiliensis Pb03] Length = 892 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 74/220 (33%), Gaps = 28/220 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------KHWKEVHDEKIK 57 + +R L + I + + ++ N + K+ Sbjct: 587 RIERAKTAQLAKKEIASKKLQNPVMQARLACNSPHNFYWPWDDDPSSVDSSLITSSGKML 646 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEW 104 ++ +I + I++ F + L + I + Sbjct: 647 LIDRLIPCLMSKNHKILIFSQFKTQLDILQDYAVYLRGWNCCRIDGAVSQADRQAQIAAF 706 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N + + + G G+NL + ++ F W+ ++ + R + G + Sbjct: 707 NTDPNYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTK 760 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 761 PVIVYRLATRGTVEQTLLEKADSKRKLEKLVIQKGKFKSL 800 >gi|224371758|ref|YP_002605922.1| putative helicase [Desulfobacterium autotrophicum HRM2] gi|223694475|gb|ACN17758.1| putative helicase [Desulfobacterium autotrophicum HRM2] Length = 942 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 75/214 (35%), Gaps = 22/214 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +E +G + Q+A+ E K ++ K + L Sbjct: 729 MYKNAIKEEIAK-KGLKQSQLFVLQALGELRQIAS----IPEIKSDNQIISPKREVLMEH 783 Query: 63 IEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWNEGKIPL 111 + +A +++ +F L + G T D+ + + Sbjct: 784 VTEAVAGNHKVLIFANFLHSLDCISLDMEKAGLDHLVMTGATRDRSAIVERFQTDNSCAA 843 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G GLNL + + F WW++ E + R + G K VF Y LI Sbjct: 844 LMMTLKTGGLGLNLTA-ADYVFLFDPWWNVAA-----ENQAIDRAHRMGQKNTVFSYRLI 897 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 A+NTI+E +L+ K + D L+ A + Sbjct: 898 ARNTIEEKILKLQAKKKALFDSLIAADNASIKQM 931 >gi|149032671|gb|EDL87541.1| rCG44314 [Rattus norvegicus] Length = 2698 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1107 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKIIGEFRDTYNP 1166 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1167 SASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1226 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1227 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1283 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1284 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNV 1340 >gi|134055454|emb|CAK43969.1| unnamed protein product [Aspergillus niger] Length = 1163 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 77/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 437 VKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 496 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 497 VYNAGKMTILDKLLARMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTTAHEDR 556 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V F W+ + + + R Sbjct: 557 IAAIDEYNKPGSEKFIFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQA-----DLQAMDR 610 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 611 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 656 >gi|242040921|ref|XP_002467855.1| hypothetical protein SORBIDRAFT_01g035270 [Sorghum bicolor] gi|241921709|gb|EER94853.1| hypothetical protein SORBIDRAFT_01g035270 [Sorghum bicolor] Length = 1478 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 68/172 (39%), Gaps = 19/172 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---- 90 + + + K+ L++++ + + +++ L L+ Sbjct: 1136 SSPPMSNFDPAKMLTDSGKLHTLDMLLRRLRSEGHRVLLFAQMTKMLDILEDYMNFRKFK 1195 Query: 91 -------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 D+ N + + + G G+NL + ++F+ + W+ + Sbjct: 1196 YFRLDGSSAISDRRDMVRDFQNRNDVFVFLLSTRAGGLGINLTA-ADTVIFYEIDWNPTQ 1254 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q + R + G + V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1255 DQ-----QAMDRTHRLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVM 1301 >gi|212534786|ref|XP_002147549.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210069948|gb|EEA24038.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1115 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 78/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 426 VKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 485 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ I+ K + +++ + L L+ + Sbjct: 486 VDNSGKMVVLDKILNRMKKQGSRVLIFSQMSRVLDILEDYCVFREHKYCRIDGSTAHEDR 545 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V F W+ + + + R Sbjct: 546 IAAIDEYNKEGSDKFIFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQA-----DLQAMDR 599 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K+ V V+ + ++ I+E VL+R K + L++ + + Sbjct: 600 AHRIGQKKQVVVFRFVTEHAIEEKVLERAAQKLRLDQLVIQQGRAQ 645 >gi|301771598|ref|XP_002921219.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like, partial [Ailuropoda melanoleuca] Length = 1363 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 354 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 413 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ I+ K +++ L L+ + Sbjct: 414 ALIKASGKLMLLQKILRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 473 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 474 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 527 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 528 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 569 >gi|296809533|ref|XP_002845105.1| helicase [Arthroderma otae CBS 113480] gi|238844588|gb|EEQ34250.1| helicase [Arthroderma otae CBS 113480] Length = 869 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 28/221 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------KHWKEVHDEKI 56 + +R L + I + ++ + N + + K+ Sbjct: 568 EEIERAKTMKLAKKEISTKKLQNPVMQARLVCNSPLNFYWPWDENSPGVDSTLVTSSGKM 627 Query: 57 KALEVIIEK--ANAAPIIVAYHFN------SDLARLQKAFPQGRTL------DKDPCTIQ 102 L+ ++ + +++ F D A +++ R D+ Sbjct: 628 LLLDRLVPCLISKGHKVLIFSQFKGQLDILEDWATQLRSWNCCRIDGAIAQADRQEQINA 687 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + G G+NL + ++ F W+ ++ + R + G Sbjct: 688 FNQDPDYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQT 741 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V VY L + T+++ +L+R +K ++ L++ K +++ Sbjct: 742 KPVIVYRLATRGTVEQTLLERAGSKRRLEKLVIQKGKFKSL 782 >gi|195582827|ref|XP_002081227.1| GD10909 [Drosophila simulans] gi|194193236|gb|EDX06812.1| GD10909 [Drosophila simulans] Length = 1001 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QR+ Y + ++I+ N A K ++ + N + Sbjct: 366 KMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N L + G G+NL ++++ + W+ + ++ + Sbjct: 486 RNRQIQEFNMDNSAKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 539 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 540 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|182625182|ref|ZP_02952958.1| DNA/RNA helicase, SNF2 [Clostridium perfringens D str. JGS1721] gi|177909641|gb|EDT72075.1| DNA/RNA helicase, SNF2 [Clostridium perfringens D str. JGS1721] Length = 1069 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 69/195 (35%), Gaps = 22/195 (11%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 + + N + K ++ + K+ ++ I++ + I++ Sbjct: 863 EKSGRDKINLFAYLTKLREICLDPSLVVPDYT---GGSSKLTVVKEIVKDASESGKKILL 919 Query: 74 AYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 F S L G + ++++N + I + + G G Sbjct: 920 FSQFTSVLQKIEEDFKKDDISYLYLDGGTSAKDRVERVKKFNEDSNIKVFLISLKAGGVG 979 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL ++++ F WW+ +E R + G + V V L+A +TI+E ++ Sbjct: 980 LNLTS-ASVVIHFDPWWNPA-----VEDQATDRAHRFGQENKVEVIKLVANDTIEEKIVL 1033 Query: 183 RLRTKSTIQDLLLNA 197 K + L++ Sbjct: 1034 MQEDKRELIQSLMDG 1048 >gi|145353082|ref|XP_001420858.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581093|gb|ABO99151.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 522 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 68/207 (32%), Gaps = 28/207 (13%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------HDEKIKALEV 61 E +G S ++ + N + ++ K+ L+ Sbjct: 272 EKATKGEGGADNFQKLNSLLMQLRKCCNHPFLFTGTDVPEDGVPIEDLISASGKLAVLDR 331 Query: 62 IIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKI 109 +++K +++ F S L + I +N Sbjct: 332 MLQKLKEGGHRVVLFSQFTSMLDILQDFLTLRGYTYARLDGSTNRVQRSIDIAAFNRPDS 391 Query: 110 PLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P+ + G G+NLQ + + F W+ + ++ + R + G K+ V + Sbjct: 392 PMFAFLLSTRAGGLGVNLQT-ADTCILFDSDWNPQ-----VDLQAMARVHRIGQKKMVHI 445 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 Y L+ T++E + QR K + ++ Sbjct: 446 YRLVTAGTVEERMTQRAEKKLFLDQMV 472 >gi|195116621|ref|XP_002002852.1| GI10760 [Drosophila mojavensis] gi|292630864|sp|B4KHL5|RAD54_DROMO RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|193913427|gb|EDW12294.1| GI10760 [Drosophila mojavensis] Length = 783 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 42/224 (18%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------------- 52 R D + + + + +L N E+ KE Sbjct: 428 VRRSLADCNEK--ASLTALADITTLKKLCNHPDLIYEKIAAKEKGFENSQNVLPPNYKPK 485 Query: 53 ------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K L+ ++ + +++ ++ L ++ T Sbjct: 486 DVNPELSGKFMLLDFMLAAIRANSDDKVVLISNYTQTLDLFEQLARKRKYTYVRLDGTMT 545 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIG 152 + K + +N+ +S G L G N L F W+ + Sbjct: 546 IKKRSKVVDRFNDPSTDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DEQA 600 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 601 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 644 >gi|329664944|ref|NP_001192313.1| putative DNA helicase INO80 complex homolog 1 [Bos taurus] gi|296483346|gb|DAA25461.1| brahma-like [Bos taurus] Length = 1566 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 70/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1093 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1152 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ I + + G G+NL + ++F+ W+ Sbjct: 1153 TYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1211 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1212 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1261 Score = 35.1 bits (79), Expect = 5.5, Method: Composition-based stats. Identities = 13/134 (9%), Positives = 35/134 (26%), Gaps = 3/134 (2%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVII 63 + Q + + ++ ++ N ++ ++ W H K + I Sbjct: 794 EDLLQSSMGSTQQAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQISKFI 853 Query: 64 EKANAAPIIVAY--HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + + + L ++L +E + + PA + Sbjct: 854 YRHGQIRVFNHSRDRWLRVLLSPFAPDYIQQSLFHRKGVNEESCFSFLRFIDVSPAEMAN 913 Query: 122 GLNLQYGGNILVFF 135 + L F Sbjct: 914 LMLQGLLARWLALF 927 >gi|170084045|ref|XP_001873246.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164650798|gb|EDR15038.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1573 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++++ +++ + + +++ + + Sbjct: 1314 DSAKLARLDSLLQELKAGDHRVLIYFQMTRMMDLMEEYLIYRQYKYLRLDGSSKLEDRRD 1373 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I I + + G G+NL + +VF+ W+ + + R + Sbjct: 1374 MVIDWQTRPDIFVFLLSTRAGGLGINLTA-ADTVVFYDHDWNPSN-----DAQAMDRAHR 1427 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R V VY LI + TIDE ++Q R K +QD+++ Sbjct: 1428 LGQTRQVTVYRLITKGTIDERIIQLARVKKDVQDIVVG 1465 >gi|323450700|gb|EGB06580.1| hypothetical protein AURANDRAFT_71986 [Aureococcus anophagefferens] Length = 1131 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 72/207 (34%), Gaps = 19/207 (9%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y +R+ ++G + + ++ N + + + + L Sbjct: 462 KMYRHVIRKRDEQAAVEGHVKDT---LGYIQRLQKICNHPALVAQPEGGSAANAREAAEL 518 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI--PLLFAHPA 117 ++ + + P + K ++N+ Sbjct: 519 RSLMPEDDHMPRGRGGR----EGWHSCKLGGNTSTKKRKQFNDDFNDPGSGYFAFLLSSK 574 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL GG+ LV F L W+ ++ R + G K + Y ++ T++ Sbjct: 575 AGGCGLNL-IGGSRLVMFDLDWNPAT-----DKQAAARCWRDGQKYQCYTYRFVSTGTLE 628 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 E +LQR +K +Q+ ++ K + H Sbjct: 629 ERMLQRQLSKEGLQN-VIED-KAQVNH 653 >gi|194883574|ref|XP_001975876.1| GG20326 [Drosophila erecta] gi|190659063|gb|EDV56276.1| GG20326 [Drosophila erecta] Length = 1027 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 82/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QR+ Y + ++I+ N A K ++ + N + Sbjct: 366 KMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 97 DPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + G G+NL ++++ + W+ + ++ + Sbjct: 486 RNRQIQEFNMDNSTKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 539 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 540 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|119192338|ref|XP_001246775.1| conserved hypothetical protein [Coccidioides immitis RS] Length = 1075 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 78/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 386 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 445 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ +++ K + +++ + L L+ + Sbjct: 446 VDNAGKMVILDKLLKRLKNQGSRVLIFSQMSRVLDILEDYCVFREHAYCRIDGSTAHEDR 505 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N + + + G G+NL +I++ + W+ + + + R Sbjct: 506 IAAIDDYNRPESDKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 559 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 560 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 605 >gi|156551567|ref|XP_001601734.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 879 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 84/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ N A K ++ + N + Sbjct: 232 IKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPG 291 Query: 43 --DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRT----- 93 + K+ L+ ++ + + +++ L L+ Sbjct: 292 PPYTTDEHLVYNCGKLVILDKLLPKLQQQQSRVLIFSQMTRMLDILEDYCHWRCYQYCRL 351 Query: 94 -----LDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I E+N + + G G+NL ++++ + W+ + Sbjct: 352 DGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 406 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G ++ V V+ I +NT++E +++R K + L++ + Sbjct: 407 -MDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGR 458 >gi|115389418|ref|XP_001212214.1| hypothetical protein ATEG_03036 [Aspergillus terreus NIH2624] gi|114194610|gb|EAU36310.1| hypothetical protein ATEG_03036 [Aspergillus terreus NIH2624] Length = 1896 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 76/250 (30%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKE------ 50 K + F ++ L + + +L N +E H + Sbjct: 1569 KLFEDFTKKEQKQLASKMGSSEKSDKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQQY 1628 Query: 51 -----------VHDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + +V Sbjct: 1629 LHAKNSYIRDVSHAPKLTALRDLLLDCGIGVAPPSETDLGTGASYVSPHRALVFCQMKEM 1688 Query: 81 LARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L +Q G + + +N + +L + G GLNL Sbjct: 1689 LDIVQSEVLKKLLPSVQFLRLDGGVEATRRQDIVNRFNTDPSYDVLLLTTSVGGLGLNLT 1748 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1749 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1802 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1803 KIDVASTVVN 1812 >gi|157127434|ref|XP_001654978.1| chromodomain helicase DNA binding protein [Aedes aegypti] gi|108882413|gb|EAT46638.1| chromodomain helicase DNA binding protein [Aedes aegypti] Length = 4467 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 73/233 (31%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + + L A N + ++ + + + + Sbjct: 2178 KYYRGILEQNFSFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEDQIQYDYRQQHGD 2237 Query: 51 ----------VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 V K+ ++ ++ K AN +++ L L+ + + Sbjct: 2238 DAEAYYKNLIVSSGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLIYRKYPFERI 2297 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2298 DGRIRGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2353 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V +Y L+ +NT + + + K + +L ++ Sbjct: 2354 --DLQAQARCHRIGQQKMVKIYRLLCRNTYEREMFDKASLKLGLDKAILQSMN 2404 >gi|302504248|ref|XP_003014083.1| hypothetical protein ARB_07803 [Arthroderma benhamiae CBS 112371] gi|291177650|gb|EFE33443.1| hypothetical protein ARB_07803 [Arthroderma benhamiae CBS 112371] Length = 1128 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 75/226 (33%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 422 VKWYQKILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 481 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 482 IDNSGKMVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDR 541 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ F W+ + + + R Sbjct: 542 IQAIDEYNRPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQA-----DLQAMDR 595 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 596 AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 641 >gi|46446009|ref|YP_007374.1| swi/snf helicase family protein [Candidatus Protochlamydia amoebophila UWE25] gi|46399650|emb|CAF23099.1| putative rapA, a bacterial member of the swi/snf helicase family [Candidatus Protochlamydia amoebophila UWE25] Length = 893 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 78/214 (36%), Gaps = 25/214 (11%) Query: 2 KQYHKF----QRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--VHD 53 + Y +F +R L+ ++ E I ++ Q+ + KE + Sbjct: 668 QHYEQFLANFKRNLFKKIEAEGITKHRLEVLEAILRLRQICCHPLLVSSIIEEKEDLITS 727 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQ 102 K L ++ + ++V F S L A+ G T +++ + Sbjct: 728 AKFDLLMQDLQTIREEGRKVLVYSQFTSMLKLMTRYANQQGWTYAYLDGSTQNREKVVTE 787 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + F + G GLNL + ++ + WW+ + +E + R + G + Sbjct: 788 FQENLEQSIFFISLKAGGVGLNLTA-ADYVILYDPWWN-----EAVEEQAINRAHRIGRQ 841 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V + +I+E +++ K T+ D + + Sbjct: 842 EQVIAKRFVVIESIEEKMMKLKAAKRTLVDDIFD 875 >gi|297699953|ref|XP_002827042.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 3-like [Pongo abelii] Length = 1945 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 943 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1002 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1003 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1062 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1063 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1116 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1117 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1158 >gi|258572046|ref|XP_002544805.1| potential DNA-dependent ATPase Ino80p [Uncinocarpus reesii 1704] gi|237905075|gb|EEP79476.1| potential DNA-dependent ATPase Ino80p [Uncinocarpus reesii 1704] Length = 1668 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1386 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1445 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1446 TVSDFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1499 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1500 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1538 >gi|293351605|ref|XP_220602.5| PREDICTED: chromodomain helicase DNA binding protein 3 [Rattus norvegicus] Length = 2047 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 1072 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1131 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1132 ALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1191 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1192 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1245 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1246 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1287 >gi|295660997|ref|XP_002791054.1| ISWI chromatin-remodeling complex ATPase ISW1 [Paracoccidioides brasiliensis Pb01] gi|226280981|gb|EEH36547.1| ISWI chromatin-remodeling complex ATPase ISW1 [Paracoccidioides brasiliensis Pb01] Length = 1154 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 463 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 522 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKD 97 + K+ L+ I+ K + +++ + L + Sbjct: 523 IDNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQYCRIDGSTAHEDR 582 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ + W+ + + + R Sbjct: 583 IAAIDEYNRPGSEKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 636 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 637 AHRIGQTKQVVVFRFVTENAIEEKVLKRAAQKLRLDQLVIQQGRAQ 682 >gi|327276401|ref|XP_003222958.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like isoform 1 [Anolis carolinensis] Length = 2892 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 70/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1104 KYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNP 1163 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K+ +++ L L+ R L + Sbjct: 1164 SAPDFHLQAMIQSAGKLVLIDKLLPKMKSGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1223 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1224 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1280 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY LI +N+ + + R K + +L ++ V Sbjct: 1281 ---DLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSV 1337 >gi|255565329|ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] gi|223537108|gb|EEF38742.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] Length = 2257 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 77/222 (34%), Gaps = 33/222 (14%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVH--- 52 + Y + Y L+ G+ + + + ++ ++ N + + +H Sbjct: 922 EYYRAMLTKNYQILRNIGKGVPQQSMLNIVMQLRKICNHPYLIPGTEPDSGSVEFLHEMR 981 Query: 53 ---DEKIKALEVIIE--KANAAPIIVAYHFN------------SDLARLQKAFPQGRTLD 95 K+ L +++ +++ + + ++ Sbjct: 982 IKASAKLTVLHSMLKALYKEGHRVLIFSQMTKLLDVLEDYLTIEFGPKTYERVDGSVSVS 1041 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +I +N+ K + SCG G+NL + +V + ++ + + Sbjct: 1042 DRQASISRFNQDKSRFVFLLSTRSCGLGINL-ATADTVVIYDSDFNP-----HADIQAMN 1095 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + VY L+ + +++E +LQ + K + L +N Sbjct: 1096 RAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1137 >gi|225848989|ref|YP_002729153.1| helicase, Snf2 family [Sulfurihydrogenibium azorense Az-Fu1] gi|225644628|gb|ACN99678.1| helicase, Snf2 family [Sulfurihydrogenibium azorense Az-Fu1] Length = 561 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 75/219 (34%), Gaps = 34/219 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y +F+ E + + N K Q+ N H K L+ I Sbjct: 344 IYKRFRNEKNFQI----MFKQNIIFSLQKLRQICNFPPNSY--------HSPKANRLKEI 391 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQK--------------AFPQGRTLDKDPCTIQEWNE 106 +++ + +IV +F + +K + + Sbjct: 392 VKELTEDGEKVIVFSNFIQEGIGKIYKNLIEVLPQSSIVLYHGSLNQKEKQEAVKRFMKD 451 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GL L + ++FF L W+ + R + G +AV Sbjct: 452 KNCMVFLGSITAAGEGLTLTS-SSYIIFFDLHWNPAKVW-----QAEDRVHRIGQTKAVN 505 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +Y + +NT++E ++Q+L K +I + L++ E V Sbjct: 506 IYNFVTKNTVEEKIIQKLEEKKSIINNLIDDTVSEIESV 544 >gi|73955627|ref|XP_536627.2| PREDICTED: similar to chromodomain helicase DNA binding protein 3 isoform 3 [Canis familiaris] Length = 1977 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 971 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1030 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1031 ALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1090 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1091 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1144 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1145 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1186 >gi|325117475|emb|CBZ53027.1| hypothetical protein NCLIV_028160 [Neospora caninum Liverpool] Length = 2544 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 73/218 (33%), Gaps = 29/218 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEVH------- 52 +K Y + + L + +S ++ ++ N ++ Sbjct: 1242 LKFYRLILTKNFDLLAKKGGGNRSSLQNICMELKKVCNHPFLCQSPDEEEDGEEWRRLLV 1301 Query: 53 --DEKI--KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 K+ + K +++ D ++ ++ +N Sbjct: 1302 DGSAKMGLLDKLLKRLKEKGHRVLIFSQMRLDGTMAKEV---------RRKAMEHFNAKN 1352 Query: 109 I--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + G G+NL + ++ F W+ + + R + G R V Sbjct: 1353 SEDFCFLLSTKAGGLGINLTS-ADTVIIFDSDWNPQN-----DLQAEARAHRIGQTRTVQ 1406 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +Y L+ +++I++ +L+R + K + L++ L + ++ Sbjct: 1407 IYRLVTKDSIEQTILERAKAKMVLDTLVVQGLNQRSLE 1444 >gi|240276494|gb|EER40006.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus H143] Length = 819 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 63/212 (29%), Gaps = 38/212 (17%) Query: 6 KFQRELY-CDLQGENIEAF-----NSASKTVKCLQLANGAVYYDE--------EKHWKEV 51 K QR Y L + + + ++ N + + Sbjct: 419 KLQRSAYEAFLGSNEMSSILRGRREALYGIDMLRKICNHPDLAEHKVLSKKPSYNYGSAS 478 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 K++ ++ ++ + ++ L + I Sbjct: 479 KSGKMQVVKSLLELWRDTGHKTLLFAQHRIMLDI----------------LERFIISMDI 522 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NL G + ++ + W+ + R + G KR V +Y Sbjct: 523 HVFLLTTKVGGLGVNLT-GADRVIIYDPDWNPST-----DVQARERAWRLGQKREVTIYR 576 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 L+ TI+E + R K + + +L K+ Sbjct: 577 LMTAGTIEEKIYHRQIFKQFLTNKILKDPKQR 608 >gi|225559061|gb|EEH07344.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces capsulatus G186AR] Length = 1142 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 449 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 508 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKD 97 + K+ L+ I+ K + +++ + L + Sbjct: 509 IDNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQYCRIDGSTAHEDR 568 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ + W+ + + + R Sbjct: 569 IAAIDEYNRPGSEKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 622 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 623 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 668 >gi|326927241|ref|XP_003209801.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Meleagris gallopavo] Length = 2782 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 70/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1012 KYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYSP 1071 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1072 TAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1131 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1132 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1188 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY LI +N+ + + R K + +L ++ V Sbjct: 1189 ---DLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSV 1245 >gi|255083104|ref|XP_002504538.1| SNF2 super family [Micromonas sp. RCC299] gi|226519806|gb|ACO65796.1| SNF2 super family [Micromonas sp. RCC299] Length = 1999 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 67/181 (37%), Gaps = 21/181 (11%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR---- 83 ++ Q+ + ++ + K++AL ++ +++ L Sbjct: 1174 LRLAQVR--QQLFFPDRRLVQFDCGKLQALATLLRMKKSGGHKVLIFTQMTKMLDILEAF 1231 Query: 84 ------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++ +Q +N + ++ S G G+NL G + +VF+ Sbjct: 1232 LNLYGYPYCRLDGTTRPEQRQIMMQRFNTDPRLFAFILSTRSGGFGINLT-GADTVVFYD 1290 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ +++ R + G R V +Y L+ + TI+E +L++ K + + Sbjct: 1291 SDWNPA-----MDQQAQDRAHRIGQTREVHIYRLVCKGTIEENILRKSMQKRELDHFAIQ 1345 Query: 197 A 197 A Sbjct: 1346 A 1346 >gi|224003061|ref|XP_002291202.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220972978|gb|EED91309.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1008 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 75/222 (33%), Gaps = 30/222 (13%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------EEKHWKEV 51 K Y + +G + + ++ + A + Sbjct: 391 KLYKDILMRDVDTLTGKGGSGSRTAVLNIVMQLRKCAGHPYLFPGIEDRSLPPLGEHLVE 450 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDPC 99 + K+ L+ ++ + +++ + T + Sbjct: 451 NSGKMVLLDKLLIRLKERGHRVLLFTQMTRILDILEDYMHMRGFQYCRIDGNTTYEDREE 510 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N+ L + G G+NLQ ++++ F W+ + + R Sbjct: 511 RIDEYNKPDSEKFLFLLSTRAGGLGINLQT-ADVVILFDSDWNPQA-----DLQAQDRAH 564 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G KR V V+ ++ ++TI++ V++R + K + +++ + Sbjct: 565 RIGQKRTVQVFRIVTEDTIEQKVVERAQQKLKLDAMVVQQGR 606 >gi|145346994|ref|XP_001417965.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578193|gb|ABO96258.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 609 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 25/183 (13%) Query: 32 CLQLA-----NGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 QL +GA+ + K++ L+ ++ + A + ++ + L L Sbjct: 404 LHQLCGDYMLDGALKDKMLDPEIGLQSAKVQRLQELLVELKAKGSRPLIFSQWKIMLDIL 463 Query: 85 QKAFPQG----------RTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNIL 132 + +D + +N + + + G GLNL G + + Sbjct: 464 EWVLHHMGWKYARLDGDTAVDNRQELVDRFNAKDSYLDTFILSTRAGGQGLNLT-GADTV 522 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + ++ + I+R R + G + V VY L+ + ++DE ++ K + Sbjct: 523 ILHDCDFNPQ-----IDRQAEDRCHRLGQTKTVTVYRLVTEGSVDEKIVAIAEQKLNLGS 577 Query: 193 LLL 195 +L Sbjct: 578 TIL 580 >gi|18400745|ref|NP_565587.1| PKL (PICKLE); ATPase/ DNA binding / DNA helicase [Arabidopsis thaliana] gi|75193642|sp|Q9S775|PKL_ARATH RecName: Full=CHD3-type chromatin-remodeling factor PICKLE; AltName: Full=Protein GYMNOS gi|6318930|gb|AAF07084.1|AF185578_1 GYMNOS/PICKLE [Arabidopsis thaliana] gi|6478518|gb|AAF13875.1|AF185577_1 chromatin remodeling factor CHD3 [Arabidopsis thaliana] gi|330252572|gb|AEC07666.1| CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana] Length = 1384 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 74/227 (32%), Gaps = 30/227 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------- 54 + Y Y L + + + ++ ++ + + +E Sbjct: 533 EYYKAIFTRNYQVLTKKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAFKQLLE 592 Query: 55 -----KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 ++ ++ K +++ F L L+ + + Sbjct: 593 SCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQI 652 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + + R Sbjct: 653 RIDRFNAKNSNKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAH 706 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G V +Y LI + TI+E ++Q + K ++ L++ LK + I+ Sbjct: 707 RLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNIN 753 >gi|322700261|gb|EFY92017.1| Putative DNA helicase ino-80 [Metarhizium acridum CQMa 102] Length = 1925 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 60/170 (35%), Gaps = 19/170 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + H K+ L+ ++ K +++ + + +++ Sbjct: 1637 FMVPSMHKFVTDSGKLAKLDELLFKLKNEGHRVLLYFQMTRMIDMMEEYLTYRNYKYCRL 1696 Query: 96 --------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + +I + + G G+NL + ++F+ W+ Sbjct: 1697 DGSTKLEDRRDTVHDFQTRPEIFIFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT----- 1750 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+ + R + G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1751 IDSQAMDRAHRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVIQG 1800 >gi|311268331|ref|XP_003131999.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1 [Sus scrofa] Length = 1968 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 994 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1053 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1054 ALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1113 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1114 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1167 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1168 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1209 >gi|169863208|ref|XP_001838226.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Coprinopsis cinerea okayama7#130] gi|116500699|gb|EAU83594.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Coprinopsis cinerea okayama7#130] Length = 904 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 25/199 (12%), Positives = 71/199 (35%), Gaps = 34/199 (17%) Query: 29 TVKCLQLANGAVYYDEEKHWKEV----------HDEKIKALEVIIEK--ANAAPIIVAYH 76 ++ ++ + +D K + K+ L+ ++ + +++ Sbjct: 591 VMQLRKVCSHPFLFDWPIDPKTMQPIIGEELVNASGKMMVLDRLLRELFRRGHKVLLFSQ 650 Query: 77 FNSDLARLQKA-----------FPQGRTLDKDPCTIQEWNEG-----KIPLLFAHPASCG 120 F + L ++ + ++ + G L + G Sbjct: 651 FTTMLDIIEDWAVENMGWSICRIDGSSSPLDRKAEMERFQTGGDDPDAPRLFLLSTRAGG 710 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + ++F+ W+ + ++ R + G + V ++ L++ +TI+ + Sbjct: 711 LGINLVA-ADTVIFYDQDWNPQ-----MDAQAQDRAHRIGQTKPVLIFRLVSAHTIETNI 764 Query: 181 LQRLRTKSTIQDLLLNALK 199 +QR K ++ L++ K Sbjct: 765 MQRAAEKRKLEALVIAKGK 783 >gi|73946633|ref|XP_860170.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 15 [Canis familiaris] Length = 1550 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 73/223 (32%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y Q + G + A + ++ ++ N + + Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGGAKTLMNTIMQLRKICNHPYMFQHIESQIFKTQRTRKD 1022 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K A +++ S + ++ F + Sbjct: 1023 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1082 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++++NE + + G GLNLQ + +V F W+ + + Sbjct: 1083 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQAQD 1136 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1179 >gi|70990968|ref|XP_750333.1| TBP associated factor (Mot1) [Aspergillus fumigatus Af293] gi|66847965|gb|EAL88295.1| TBP associated factor (Mot1), putative [Aspergillus fumigatus Af293] Length = 1891 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 77/249 (30%), Gaps = 60/249 (24%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------ 50 K + F ++ LQ + + + +L N +E H + Sbjct: 1566 KLFEDFTKKEQKALQDKVGSTEKADKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQQY 1625 Query: 51 -----------VHDEKIKALEVIIEKA------------------NAAPIIVAYHFNSDL 81 H K+ AL ++ + ++ L Sbjct: 1626 LAAKHSNIRDVAHAPKLSALRDLLIDCGIGVDSPSEGDLSGASYVSPHRALIFCQMKEML 1685 Query: 82 ARLQKAFPQ-------------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 +Q + + +N + +L + G GLNL Sbjct: 1686 DIVQSEVFNKLLPSVQFLRLDGSVEATRRQDIVNRFNTDPSYDVLLLTTSVGGLGLNLT- 1744 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R K Sbjct: 1745 GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1799 Query: 188 STIQDLLLN 196 + ++N Sbjct: 1800 IDVASTVVN 1808 >gi|226706291|sp|B5DE69|CHD8_XENTR RecName: Full=Chromodomain-helicase-DNA-binding protein 8; Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8 Length = 2184 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWK---------- 49 K Y + + L N + ++ + N + Sbjct: 1003 KYYRAILEKNFSFLTKGASQSNTPNLLNTMMELRKCCNHPYLITGAEEKIISEFREATPV 1062 Query: 50 ----------EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R L + Sbjct: 1063 VPPDFHVQAMVRSSGKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1122 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I ++ + + G G+NL + + F W+ + Sbjct: 1123 IDGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1179 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV +Y LI +N+ + + + K + +L ++ H+ Sbjct: 1180 ---DLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNHL 1236 >gi|212549607|ref|NP_001131089.1| chromodomain-helicase-DNA-binding protein 8 [Xenopus (Silurana) tropicalis] gi|197246330|gb|AAI68549.1| Unknown (protein for MGC:184754) [Xenopus (Silurana) tropicalis] Length = 2179 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWK---------- 49 K Y + + L N + ++ + N + Sbjct: 998 KYYRAILEKNFSFLTKGASQSNTPNLLNTMMELRKCCNHPYLITGAEEKIISEFREATPV 1057 Query: 50 ----------EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R L + Sbjct: 1058 VPPDFHVQAMVRSSGKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1117 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I ++ + + G G+NL + + F W+ + Sbjct: 1118 IDGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1174 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV +Y LI +N+ + + + K + +L ++ H+ Sbjct: 1175 ---DLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNHL 1231 >gi|156383405|ref|XP_001632824.1| predicted protein [Nematostella vectensis] gi|156219886|gb|EDO40761.1| predicted protein [Nematostella vectensis] Length = 1022 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 86/232 (37%), Gaps = 40/232 (17%) Query: 2 KQYH---KFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEEKH-- 47 K Y K QR Y + ++I+ N + ++ + N +D + Sbjct: 375 KVYTGLTKMQRSWYTKILMKDIDVVNGAGKTDKMRLLNILMQLRKCCNHPYLFDGAEPGP 434 Query: 48 ------WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR------- 92 + K++ L+ ++ K + +++ L L+ + Sbjct: 435 PYTTDVHLIENSGKMRVLDKLLARLKQEGSRVLIFSQMTRLLDILEDYCLWRQYDYCRLD 494 Query: 93 ---TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ I +N + + G G+NL +I++ + W+ + Sbjct: 495 GQTPHEERQAYINSFNMPGSTKFIFMLSTRAGGLGINL-ATADIVILYDSDWNPQ----- 548 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ I+++T++E +++R K + +++ + Sbjct: 549 VDLQAMDRAHRIGQKKQVKVFRFISESTVEERIIERAEMKLRLDAVVIQQGR 600 >gi|170041242|ref|XP_001848380.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus] gi|167864826|gb|EDS28209.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus] Length = 787 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 82/235 (34%), Gaps = 46/235 (19%) Query: 2 KQYHKFQRE---LYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEE------------ 45 + Y F + L+ ++A + S +L N E+ Sbjct: 407 ELYKSFLQSDSIRRSVLEKSEVKASLTALSNITALKKLCNHPDLVYEKIKERAEGFEEAY 466 Query: 46 ---------KHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ--- 90 K + K+ L+ ++ + I++ ++ L +K + Sbjct: 467 KILPANYSAKEVRPEFGGKLMVLDCMLASIKMNTNDKIVLVSNYTQTLDLFEKLCRKRGY 526 Query: 91 -------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 T+ K + E+N+ + + G GLNL G N LV F W+ Sbjct: 527 GYVRLDGTMTIKKRGKVVDEFNKPDSKEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNP 585 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ F+Y L+A +I+E + QR K + + +++ Sbjct: 586 AN-----DEQAMARVWRDGQKKPCFIYRLLATGSIEEKIFQRQTHKKALSNTVVD 635 >gi|52545542|emb|CAH56404.1| hypothetical protein [Homo sapiens] Length = 1059 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 340 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 399 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 400 SLVKSSGKLMLLQKMLKKLRDEGHRLLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 459 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 460 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 513 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 514 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 555 >gi|303279448|ref|XP_003059017.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226460177|gb|EEH57472.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 811 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 25/188 (13%) Query: 32 CLQLANGAVY-----YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARL 84 QL + K + LE ++ K+ + ++ + L L Sbjct: 612 LHQLCEDPQLGGALAHKALPAEAAFDASKTRKLETLLADLKSKGSRPLIFSQWKIVLDIL 671 Query: 85 QK----------AFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNIL 132 + +++ +N + + G GLNL G +++ Sbjct: 672 EWALRERGHKFVRLDGSTAVEERQRICDAFNRDGSDIFAFLLSTRAGGQGLNLT-GADVV 730 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V ++ + I+R R + G + V VY L+ T+DE +++ K + Sbjct: 731 VIHDCDFNPQ-----IDRQAEDRSHRLGQTKPVTVYRLVTSGTVDERIVEIAEGKLALDA 785 Query: 193 LLLNALKK 200 +L+ K Sbjct: 786 AILSDPKA 793 >gi|56800176|emb|CAI35991.1| chromodomain helicase DNA binding protein 3 [Mus musculus] gi|56800269|emb|CAI35246.1| chromodomain helicase DNA binding protein 3 [Mus musculus] Length = 2055 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 1046 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1105 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1106 ALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1165 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1166 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1219 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1220 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1261 >gi|312074579|ref|XP_003140033.1| hypothetical protein LOAG_04448 [Loa loa] gi|307764800|gb|EFO24034.1| hypothetical protein LOAG_04448 [Loa loa] Length = 1841 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 77/222 (34%), Gaps = 31/222 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y +L + N ++ + N + +E Sbjct: 747 QYYKWILTKNYKELSKGVKGSINGFVNLVMELKKCCNHSSLVRSYDQPEEGADARLQQLL 806 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 K+ L+ ++ + +++ L +Q+ R + Sbjct: 807 KSSGKLILLDKLLCRLQETGHRVLIFSQMVMMLDIMQEYLQLRRFPSQRLDGSMRSDLRK 866 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N P + G G+NL + ++ F W+ + + ++R Sbjct: 867 AALDHFNAPNSPDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAMSRA 920 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + +++E +++R + K + L++ + Sbjct: 921 HRIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLIIQRM 962 >gi|170580649|ref|XP_001895355.1| recombination factor GdRad54 [Brugia malayi] gi|158597754|gb|EDP35808.1| recombination factor GdRad54, putative [Brugia malayi] Length = 865 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 77/236 (32%), Gaps = 45/236 (19%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE------------ 45 K Y + + + + + S +L N + Sbjct: 521 KLYRQLISAFSKGGKQKVTEGDKITGTALSFITNLKKLCNHPQLILNKCQKKEEGFEDCL 580 Query: 46 --------KHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDL----------ARL 84 K ++ K+K L+ ++ ++ ++ + Sbjct: 581 KLFPGEFGKKFEPAFSGKMKVLDYLLAATRATTNDKFVLVSNYTQTIDAFVELCQLRRYP 640 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 T+ + ++++N+ + + + G GLNL G N L+ F W+ Sbjct: 641 YIRLDGTCTIKQRAKLVEKFNDPESVEYVFLLSSKAGGCGLNL-IGANRLIMFDPDWNPA 699 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + + R + G K+ F+Y L++ +I+E + QR K + +++ + Sbjct: 700 N-----DDQAMARVWRDGQKKNCFIYRLLSTGSIEEKMFQRQAHKKALSSCVVDEI 750 >gi|62530244|gb|AAX85379.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus norvegicus] gi|62530246|gb|AAX85380.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus norvegicus] gi|62530248|gb|AAX85381.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus norvegicus] gi|62530250|gb|AAX85382.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus norvegicus] Length = 1959 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 950 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1009 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1010 ALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1069 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1070 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1123 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1124 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1165 >gi|68075951|ref|XP_679895.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56500739|emb|CAH95008.1| conserved hypothetical protein [Plasmodium berghei] Length = 1536 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 77/222 (34%), Gaps = 27/222 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEV------HD 53 ++ Y + Y L + A NS ++ ++ N E E Sbjct: 641 IEYYKNILTKNYEQLAKASGGAKNSLQNICMELKKVCNHPFLCCEPIDKDEYRERLVYSS 700 Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTI 101 KI LE ++ + +++ L + T + + Sbjct: 701 GKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRGFKHQRLDGTMTKEMRKKAM 760 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G G+NL + ++ + W+ + + R + Sbjct: 761 NHFNSKNSDDFVFLLSTKAGGLGINLTS-ADTVIIYDSDWNPQN-----DLQAGARAHRI 814 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V +Y L+ +++I++ +L+R + K + L++ L K+ Sbjct: 815 GQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKK 856 >gi|316974135|gb|EFV57661.1| chromatin-remodeling complex ATPase chain Iswi [Trichinella spiralis] Length = 1075 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 81/220 (36%), Gaps = 29/220 (13%) Query: 3 QYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEK--------HWKEVHD 53 Y K + + G +E + ++ + N +D + + Sbjct: 432 MYTKILMKDIDIVNGAGKLEKARLLNILMQLRKCCNHPYLFDGAEPGPPFTTDQHLVDNC 491 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTI 101 K+ ++ ++ K + +++ + L L+ + + +I Sbjct: 492 GKMVLVDKLLPKLKEQGSRVLIFSQMSRMLDILEDYCLWKQYPYCRLDGQTPHQERQASI 551 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G G+NL +I++ + W+ + ++ + R + Sbjct: 552 DAFNAPNSEKFIFMLTTRAGGLGINL-ATADIVILYDSDWNPQ-----MDLQAMDRAHRI 605 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V V+ LI +NT++E +++R K + +++ + Sbjct: 606 GQKKTVRVFRLITENTVEERIVERAEIKLRLDTVVIQQGR 645 >gi|299147035|ref|ZP_07040102.1| Snf2 family protein [Bacteroides sp. 3_1_23] gi|298514920|gb|EFI38802.1| Snf2 family protein [Bacteroides sp. 3_1_23] Length = 946 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 65/206 (31%), Gaps = 21/206 (10%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + L L F+ + ++ QL+ + +I Sbjct: 730 YEQEKNSLRNILLQHPQSTDRLHSFSVLNGILRLRQLSCHPQLILPDYTGTSGKTAQIIE 789 Query: 59 LEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + ++ +++ F L + A G T ++ ++ + Sbjct: 790 TFDTL-QSEGHKVLIFSSFVRHLEVLAEAFHERGWKYALLTGSTNNRPSEIAYFTDQKDV 848 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL + + WW+ E + R + G + V Y Sbjct: 849 QAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAYR 902 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I QN+I+E +L K + + + Sbjct: 903 FITQNSIEEKILHLQDEKRKLAETFV 928 >gi|294947224|ref|XP_002785281.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] gi|239899054|gb|EER17077.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] Length = 945 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 29/244 (11%), Positives = 73/244 (29%), Gaps = 46/244 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---------- 51 + Y L + + ++ + + Sbjct: 330 RVYKSVYEGKIYSLVNGKGGKSSLNNIAMELRKCCAHPYLISGVEDSHLEALGVKPDSAV 389 Query: 52 -------HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GR 92 K+ LE +I + +++ F L ++ Sbjct: 390 AMQNLTEMSGKLVFLEKLIPQLREKKEKLLIFSQFKIVLDIIEDWLTWKKLPVERLDGSV 449 Query: 93 TLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + K I +N+ + G G+NL +++V + W+ + + Sbjct: 450 SGGKRQAAIDRFNDKKHDSFAFLLTTRAGGVGINLTS-ASVVVIYDSDWNPQN-----DN 503 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL---------KKE 201 R + G + V VY L+ +N+ +E + + K ++ +++++ K+E Sbjct: 504 QAQARCHRIGQTKTVRVYRLLTRNSYEEKLFEIASKKLGLEQAIMSSVTANSELNLSKQE 563 Query: 202 TIHV 205 H+ Sbjct: 564 LEHL 567 >gi|238504258|ref|XP_002383360.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] gi|220690831|gb|EED47180.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] Length = 974 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 77/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 298 VKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 357 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 358 VYNAGKMSILDKLLARMQKQGSRVLIFSQMSRVLDILEDYCVFREYNYCRIDGTTAHEDR 417 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + + + R Sbjct: 418 IAAIDEYNKPGSDKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDR 471 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 472 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 517 >gi|119596385|gb|EAW75979.1| chromodomain helicase DNA binding protein 6, isoform CRA_f [Homo sapiens] Length = 1856 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 74/235 (31%), Gaps = 40/235 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD------ 53 K Y + + L N + ++ + N +EEK ++ Sbjct: 32 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINEEKILEDFRKTHSPDA 91 Query: 54 ------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-- 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 92 PDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERID 151 Query: 98 --------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I + + + + G G+NL + + F W+ + Sbjct: 152 GRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN---- 206 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 207 -DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 260 >gi|255561731|ref|XP_002521875.1| ATP binding protein, putative [Ricinus communis] gi|223538913|gb|EEF40511.1| ATP binding protein, putative [Ricinus communis] Length = 756 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 62/158 (39%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K +AL ++ + + +++ + S L L+ + + Sbjct: 580 SAKCRALAELLPELRRDGHKVLIFSQWTSMLDILEWTLDVIGLTYRRLDGSTPVTERQTI 639 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N I + G GLNL G + +V + ++ + I+R R + Sbjct: 640 VDAFNNDTSIFACLLSTRAGGQGLNLT-GADTVVIHDMDFNPQ-----IDRQAEDRCHRI 693 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V +Y L+ + T+DE + + + K T+ +L + Sbjct: 694 GQTKPVTIYRLVTKGTVDENIYEIAKRKLTLDAAVLES 731 >gi|255936215|ref|XP_002559134.1| Pc13g07020 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583754|emb|CAP91771.1| Pc13g07020 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1116 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 70/215 (32%), Gaps = 32/215 (14%) Query: 6 KFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYD--------EEKHWKEV 51 + QR +Y G + NS +++N D + + Sbjct: 613 QLQRTIYKRFLGSDDMKSIIRGRRNSLYGIDILRKISNHPDLADHTLRSREADYGDAERS 672 Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCT 100 K+ + + + ++ L ++K + + Sbjct: 673 GKMKVLKGLLEVWRDTGHKTLLFTQGRLMLDIIEKFLGVLGGFNCRRMDGTTPIKERQSL 732 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++N + I + G G+NL G + ++ + W+ + R + Sbjct: 733 VNDFNNDPNIHVFLLTTRVGGIGVNLT-GADRVIIYDPDWNPST-----DLQARERAWRL 786 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G KR V ++ L+ + TI+E + R K + + + Sbjct: 787 GQKRDVTIFRLMTKGTIEEKIYHRQIFKQFLTNKI 821 >gi|146417920|ref|XP_001484927.1| hypothetical protein PGUG_02656 [Meyerozyma guilliermondii ATCC 6260] Length = 1224 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 75/225 (33%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y + + + E A + K ++ ++ N ++E + Sbjct: 721 LYQQMLKHNALFVGAEVGSAKSGIKGLNNKIMQLRKICNHPFVFEEVEDVLNPSRMTNNL 780 Query: 53 ----DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ ++ K + +++ + S + ++ Sbjct: 781 IWRSSGKFELLDRVLPKFKASGHRVLLFFQMTSVMDIMEDFLRLRNMKYLRLDGATKAED 840 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 841 RQEMLKLFNAPGSEYFCFLLSTRAGGLGLNLQS-ADTVIIFDTDWNPHQ-----DLQAQD 894 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++E++L+R K I ++ A K Sbjct: 895 RAHRIGQKNEVRILRLITNESVEEVILERAHQKLDIDGKVIQAGK 939 >gi|46110288|ref|XP_382202.1| hypothetical protein FG02026.1 [Gibberella zeae PH-1] gi|84029313|sp|Q4IL82|INO80_GIBZE RecName: Full=Putative DNA helicase INO80 Length = 1904 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ K + +++ + + +++ + Sbjct: 1624 DSGKLAKLDDLLFKLKSEGHRVLLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKLEDRRD 1683 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1684 TVHDFQTRPEIFIFLLSTRAGGLGINLTT-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1737 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1738 LGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVIQG 1776 >gi|56203112|emb|CAI19451.1| chromodomain helicase DNA binding protein 5 [Homo sapiens] gi|56417881|emb|CAI19894.1| chromodomain helicase DNA binding protein 5 [Homo sapiens] Length = 1195 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 474 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 533 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 534 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 593 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 594 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 647 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 648 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 689 >gi|20151803|gb|AAM11261.1| RH13158p [Drosophila melanogaster] Length = 1027 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QR+ Y + ++I+ N A K ++ + N + Sbjct: 366 KMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N L + G G+NL ++++ + W+ + ++ + Sbjct: 486 RNRQIQEFNMDNSAKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 539 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 540 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|159130807|gb|EDP55920.1| TBP associated factor (Mot1), putative [Aspergillus fumigatus A1163] Length = 1891 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 77/249 (30%), Gaps = 60/249 (24%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------ 50 K + F ++ LQ + + + +L N +E H + Sbjct: 1566 KLFEDFTKKEQKALQDKVGSTEKADKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQQY 1625 Query: 51 -----------VHDEKIKALEVIIEKA------------------NAAPIIVAYHFNSDL 81 H K+ AL ++ + ++ L Sbjct: 1626 LAAKHSNIRDVAHAPKLSALRDLLIDCGIGVDSPSEGDLSGASYVSPHRALIFCQMKEML 1685 Query: 82 ARLQKAFPQ-------------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 +Q + + +N + +L + G GLNL Sbjct: 1686 DIVQSEVFNKLLPSVQFLRLDGSVEATRRQDIVNRFNTDPSYDVLLLTTSVGGLGLNLT- 1744 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R K Sbjct: 1745 GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1799 Query: 188 STIQDLLLN 196 + ++N Sbjct: 1800 IDVASTVVN 1808 >gi|17737463|ref|NP_523719.1| imitation SWI, isoform A [Drosophila melanogaster] gi|24653132|ref|NP_725203.1| imitation SWI, isoform B [Drosophila melanogaster] gi|24653134|ref|NP_725204.1| imitation SWI, isoform C [Drosophila melanogaster] gi|6647560|sp|Q24368|ISWI_DROME RecName: Full=Chromatin-remodeling complex ATPase chain Iswi; AltName: Full=CHRAC 140 kDa subunit; AltName: Full=Nucleosome-remodeling factor 140 kDa subunit; Short=NURF-140; AltName: Full=Protein imitation swi gi|439197|gb|AAA19868.1| ISWI protein [Drosophila melanogaster] gi|7303422|gb|AAF58479.1| imitation SWI, isoform A [Drosophila melanogaster] gi|21627326|gb|AAM68637.1| imitation SWI, isoform B [Drosophila melanogaster] gi|21627327|gb|AAM68638.1| imitation SWI, isoform C [Drosophila melanogaster] gi|206597326|gb|ACI15757.1| FI04427p [Drosophila melanogaster] Length = 1027 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QR+ Y + ++I+ N A K ++ + N + Sbjct: 366 KMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N L + G G+NL ++++ + W+ + ++ + Sbjct: 486 RNRQIQEFNMDNSAKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 539 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 540 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|166240632|ref|XP_001732968.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|165988704|gb|EDR41103.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1838 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 64/167 (38%), Gaps = 21/167 (12%) Query: 51 VHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 KI +L + K + ++ + S L L+ + + Sbjct: 1667 KSSTKIDSLLDELNKVFKNEPDSKCLIFSQWTSMLDLLEYPLNLNQFQFVRLDGKIPQKQ 1726 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+ + E + + + G GLNL + + WW+ +Q I+R+ Sbjct: 1727 REVAIKRFKEEPNVKIFLISIKAGGLGLNLVA-ASHVFLMDPWWNPSTEEQAIDRV---- 1781 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G + V V + +++I+E +L ++K + LN +KK+T Sbjct: 1782 -YRIGQNKNVNVIRFLIKDSIEERILNLQKSKKDLAKEALNTMKKQT 1827 >gi|47215569|emb|CAG10740.1| unnamed protein product [Tetraodon nigroviridis] Length = 3070 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 70/238 (29%), Gaps = 43/238 (18%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD------ 53 K Y + + L N + ++ + N K + Sbjct: 523 KYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLITGSAEEKILESFRKSYS 582 Query: 54 ---------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 K+ ++ ++ K A ++V L L+ Q R + Sbjct: 583 PDAADFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRRYSYE 642 Query: 97 D----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I + + + + G G+NL + + F W+ + Sbjct: 643 RIDGRVRGNQRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN- 700 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 701 ----DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 754 >gi|316974280|gb|EFV57776.1| domain protein, SNF2 family [Trichinella spiralis] Length = 2137 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 27/224 (12%), Positives = 67/224 (29%), Gaps = 34/224 (15%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + + L + + + + N + E Sbjct: 993 KYYKYVLTKNFDALNTRCGGSQVSLLNIMMDLKKCCNHPYLFPIAASEAPKLPNGAFEGS 1052 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L ++ + Sbjct: 1053 ALVKSCGKLILLQKMLRMLKEGGHRVLIFSQMTKMLDLIEDFLEYEGYKYERIDGSVTGS 1112 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N P + + G G+NL + ++ + W+ + Sbjct: 1113 LRQDAIDRFNAPNAPQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1166 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G R V +Y + +N+++E + + K + L++ A Sbjct: 1167 SRAHRIGQNRKVMIYRFVTRNSVEERITTVAKKKMMLTHLVVRA 1210 >gi|150951142|ref|XP_001387415.2| ATPase component of a four subunit chromatin remodeling complex [Scheffersomyces stipitis CBS 6054] gi|149388353|gb|EAZ63392.2| ATPase component of a four subunit chromatin remodeling complex [Pichia stipitis CBS 6054] Length = 860 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 38/226 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK----------TVKCLQLANGAVYY--------DEEKH 47 + QR+ Y + ++I+A N A+K ++ + N + Sbjct: 214 EMQRKWYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDE 273 Query: 48 WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR----------TLD 95 + +K+ L+ ++ K + +++ + L L+ Sbjct: 274 HLVYNSQKMIILDQLLRKFQKEGSRVLIFSQMSRMLDILEDYCFFREFKYCRIDGQTEHA 333 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I E+N+ + + G G+NL +I+V F W+ + + + Sbjct: 334 DRINAIDEYNKPGSDRFVFLLTTRAGGLGINLTS-ADIVVLFDSDWNPQA-----DLQAM 387 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V V+ + +N I+E VL+R K + L++ + Sbjct: 388 DRAHRIGQTKQVKVFRFVTENAIEEKVLERATQKLRLDQLVIQQGR 433 >gi|124358950|ref|NP_666131.2| chromodomain helicase DNA binding protein 3 [Mus musculus] Length = 2021 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 1046 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1105 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1106 ALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1165 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1166 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1219 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1220 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1261 >gi|52545633|emb|CAH56377.1| hypothetical protein [Homo sapiens] Length = 1061 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 333 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 392 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 393 SLVKSSGKLMLLQKMLKKLRDEGHRLLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 452 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 453 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 506 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 507 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 548 >gi|326772974|ref|ZP_08232258.1| SNF2/helicase domain protein [Actinomyces viscosus C505] gi|326637606|gb|EGE38508.1| SNF2/helicase domain protein [Actinomyces viscosus C505] Length = 1244 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 16/167 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--------F 88 + K++ L + + +V F L+ +++ Sbjct: 1040 PATGRSGPGRRPSPSAKVEVLVEHLGPILSEGHRALVFSQFTRYLSGVREHLEATGVRTA 1099 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I + G+ + + G GL L + + WW+ + +Q + Sbjct: 1100 YMDGSTPDRQKVIDAFRAGEADVFLISLKAGGFGLTLTE-ADYVFLLDPWWNPQAEEQAV 1158 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V VY L++ +TI+E V+ K+ + ++ Sbjct: 1159 DR-----THRIGQDKPVMVYRLVSADTIEEKVMALKEKKAELFARVV 1200 >gi|321461806|gb|EFX72834.1| hypothetical protein DAPPUDRAFT_215757 [Daphnia pulex] Length = 1614 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 68/233 (29%), Gaps = 42/233 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ +L N + + H Sbjct: 963 LYRHMQSKGVMLTDGSEKDKKGKGGAKALMNTIMQLRKLCNHPFMFQHIEEAYCEHMNVP 1022 Query: 53 ------------DEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K +++ + ++ Sbjct: 1023 GGLVSGPDLYRTSGKFELLDRILPKLKHLNHRVLLFCQMTQLMTIMEDYLNWKSFKYLRL 1082 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D ++ +N+ + G GLNLQ + ++ F W+ + Sbjct: 1083 DGTTKADDRGDLLKRFNDKSSDYFLFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ--- 1138 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G V V L+ +++E +L R K + ++ A K Sbjct: 1139 --DLQAQDRAHRIGQTNEVRVLRLMTVGSVEERILAAARYKLNMDQKVIQAGK 1189 >gi|219121950|ref|XP_002181319.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407305|gb|EEC47242.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1431 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 27/220 (12%), Positives = 76/220 (34%), Gaps = 28/220 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------EEKHWKEVHD 53 K Y +QG + + ++ + A + + Sbjct: 571 KLYRDILIRDIDAVQGTSGSRTAILNIVMQLRKCAGHPYLFPGTEDRSLPPLGEHLVENC 630 Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPCTI 101 K+ L+ ++++ + +++ + ++ I Sbjct: 631 GKMVVLDKLLKRLHERGHRVLLFTQMTRVLDIMEDYLVMRRFPYCRIDGNTSYEQREEYI 690 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G G+NLQ ++++ + W+ + + R + Sbjct: 691 DAYNAPNSEKFIFLLSTRAGGLGINLQT-ADVVILYDSDWNPQA-----DLQAQDRAHRI 744 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G KRAV V+ L+ ++T++E +++R + K + +++ + Sbjct: 745 GQKRAVQVFRLVTEHTVEEKIVERAQQKLKLDAMVVQQGR 784 >gi|195333840|ref|XP_002033594.1| GM21414 [Drosophila sechellia] gi|194125564|gb|EDW47607.1| GM21414 [Drosophila sechellia] Length = 1027 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QR+ Y + ++I+ N A K ++ + N + Sbjct: 366 KMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N L + G G+NL ++++ + W+ + ++ + Sbjct: 486 RNRQIQEFNMDNSAKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 539 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 540 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|195591505|ref|XP_002085481.1| GD14801 [Drosophila simulans] gi|194197490|gb|EDX11066.1| GD14801 [Drosophila simulans] Length = 893 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 69/222 (31%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 K Y + + L + + + + + N + + Sbjct: 521 KFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEAPISPSGIYEMN 580 Query: 53 -----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L ++++ + +++ L L+ Sbjct: 581 SLTKASGKLDLLSKMLKQLKKDNHRVLLFSQMTKMLNILEHFLEGEGYQYDRIDGAIRGD 640 Query: 98 --PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N+ + + G G+NL + ++ F W+ + Sbjct: 641 LRQKAIDRFNDPGSEQFVFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDVQAF 694 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G K+ V +Y + N+++E ++Q + K + L++ Sbjct: 695 SRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKRKMMLTHLVV 736 >gi|241602475|ref|XP_002405194.1| DNA repair and recombination protein RAD54B, putative [Ixodes scapularis] gi|215500578|gb|EEC10072.1| DNA repair and recombination protein RAD54B, putative [Ixodes scapularis] Length = 680 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 69/223 (30%), Gaps = 53/223 (23%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEK-------------------------------HWK 49 +A + + + +L N Sbjct: 368 DANHHLACILALRKLCNHPSLVTPRHMSLWGCFRSSQDLLPTKSQKQFSLDMSKLAAESL 427 Query: 50 EVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 E K+K L + + + I+V +F L +Q+ + Sbjct: 428 EASSGKLKVLAAMLASLWDSSPREKIVVVSNFTRMLNVVQELCACKGYTFVRLDGSTSST 487 Query: 96 KDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++ +N + + G GLNL G + +V + + W+ + + Sbjct: 488 QRLEIVERFNSAHSDCFVFLLSCKAGGVGLNL-IGASRIVLYDVDWNPAN-----DLQAM 541 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V+VY L+ T++E + QR K + +L Sbjct: 542 ARVWRDGQGRHVYVYRLVTTGTVEEKIYQRQVMKLDLSRTVLE 584 >gi|118083490|ref|XP_416560.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 885 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 71/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHDE 54 K Y + +G + ++ + ++ E Sbjct: 278 KYYKAILTKDLDAFEGGTGRKVMLQNVLIQLRKCVAHPYLFNGVEPEPFEIGDHIVEASG 337 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ +++ L LQ ++ I+ Sbjct: 338 KLCLLDKLLSFLYDGGHRVLLFSQMTKLLDILQDYMDYRGYSYERLDGSVRGEERHLAIK 397 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + + R + G Sbjct: 398 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFTDSDFNPQN-----DLQAIARAHRIGQH 451 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V + LI ++T++E++ +R +K + + ++ Sbjct: 452 KPVKIIRLIGRDTVEEIIYRRAASKLRLTNAIVEG 486 >gi|315048045|ref|XP_003173397.1| ISWI chromatin-remodeling complex ATPase ISW1 [Arthroderma gypseum CBS 118893] gi|311341364|gb|EFR00567.1| ISWI chromatin-remodeling complex ATPase ISW1 [Arthroderma gypseum CBS 118893] Length = 767 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 74/221 (33%), Gaps = 28/221 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------KHWKEVHDEKI 56 + +R L + I + + ++ + N + + K+ Sbjct: 466 DEIERAKTMKLAKKEISSKKLQNPVMQARLVCNSPLNFYWPWDEDSSGVDSTLVTSSGKM 525 Query: 57 KALEVIIEK--ANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQE 103 L+ ++ + +++ F + I Sbjct: 526 LLLDRLVPCLISKGHKVLIFSQFKGQLDILEDWATQLRSWNCCRIDGAIAQADRQEQINA 585 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + G G+NL + ++ F W+ ++ + R + G Sbjct: 586 FNSDPDYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQT 639 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V VY L + TI++ +L+R +K ++ L++ K +++ Sbjct: 640 KPVIVYRLATRGTIEQTLLERAGSKRRLEKLVIQKGKFKSL 680 >gi|281206043|gb|EFA80232.1| DEAD-box RNA helicase [Polysphondylium pallidum PN500] Length = 1657 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 66/161 (40%), Gaps = 18/161 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ 102 D ++ L+ ++E + ++ + S L ++ + + +I+ Sbjct: 1492 DALMQELDKVMENEPDSKSLIFSQWTSMLDLIEIPLQKKGIAFVRLDGKVPQKQREISIR 1551 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + E I + + G GLNL + + WW+ +Q I+R+ + G Sbjct: 1552 RFKEEPNIKVFLISMKAGGLGLNL-VVASHVFLLDPWWNPATEEQAIDRV-----YRIGQ 1605 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + VFV + +++I+E +L+ + K + L +KK+ Sbjct: 1606 NKNVFVTRFVIKDSIEERILKLQQNKKNLAQDTLQ-MKKQI 1645 Score = 40.5 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 6/68 (8%), Positives = 20/68 (29%), Gaps = 6/68 (8%) Query: 1 MKQYHKF----QRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 ++ Y + +++ Q + + ++ Q+ + K E Sbjct: 1167 LEIYQELWNASKKKFINFFQSGTLLKNYAHILELLLRLRQICDHPYLVRNILKDKLFSFE 1226 Query: 55 KIKALEVI 62 + E + Sbjct: 1227 EQDVSEEL 1234 >gi|77404417|ref|NP_796198.1| chromodomain-helicase-DNA-binding protein 9 [Mus musculus] gi|76782010|gb|AAZ73184.2| ciprofibrate-bound protein PRIC320 [Mus musculus] Length = 2869 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1107 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1166 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1167 SASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1226 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1227 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1283 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1284 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNV 1340 >gi|62530242|gb|AAX85378.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus norvegicus] Length = 1927 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 952 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1011 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1012 ALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1071 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1072 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1125 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1126 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1167 >gi|212530546|ref|XP_002145430.1| RSC complex subunit (Sth1), putative [Penicillium marneffei ATCC 18224] gi|210074828|gb|EEA28915.1| RSC complex subunit (Sth1), putative [Penicillium marneffei ATCC 18224] Length = 1430 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + D +G I ++ ++ +L N ++ + Sbjct: 806 KLYKQLLTHNKMVVSDGKGGKIGMRGLSNMLMQMRKLCNHPFVFEPVEDQMNPGRGTNDL 865 Query: 55 ------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ ++ K +++ + + ++ D Sbjct: 866 IWRTAGKFELLDRVLPKFKATGHRVLLFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDD 925 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ + W+ + + Sbjct: 926 RSELLKLFNAPNSDYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 979 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L R + K + ++ A K Sbjct: 980 RAHRIGQKNEVRILRLITSNSVEEKILGRAQFKLDMDGKVIQAGK 1024 >gi|25412286|pir||B84645 hypothetical protein At2g25170 [imported] - Arabidopsis thaliana Length = 1359 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 74/227 (32%), Gaps = 30/227 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------- 54 + Y Y L + + + ++ ++ + + +E Sbjct: 533 EYYKAIFTRNYQVLTKKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAFKQLLE 592 Query: 55 -----KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 ++ ++ K +++ F L L+ + + Sbjct: 593 SCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQI 652 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + + R Sbjct: 653 RIDRFNAKNSNKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAH 706 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G V +Y LI + TI+E ++Q + K ++ L++ LK + I+ Sbjct: 707 RLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNIN 753 >gi|320591351|gb|EFX03790.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 1138 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 71/224 (31%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + G+ + ++ + N + Sbjct: 421 VKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 480 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKD 97 + K+ L+ ++ + +++ + L + Sbjct: 481 VYNAGKMAVLDRLLKRMSEQGSRVLIFSQMSRLLDILEDYCVFRGYQYCRIDGSTAHEDR 540 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + + + R Sbjct: 541 IAAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDR 594 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V VY + N I+E VL+R K + L++ + Sbjct: 595 AHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQQGR 638 >gi|256085322|ref|XP_002578871.1| helicase [Schistosoma mansoni] gi|238664258|emb|CAZ35109.1| helicase swr1, putative [Schistosoma mansoni] Length = 1272 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 66/174 (37%), Gaps = 19/174 (10%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 N + E K+ L+ ++ + +N +++ + L++ + Sbjct: 936 NQYAMWKLPNLLYEDDSGKLTTLDYLLSELKSNGHRVLIYSQMTRMIDILEEFMLYRKHA 995 Query: 95 D-----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + Q + + + G G+NL + ++F+ W+ Sbjct: 996 YLRLDGSSRLSDRRDMVAQWQTNPRWFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT- 1053 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI +NT++ +L+R K +Q +++ + Sbjct: 1054 ----VDQQAMDRAHRLGQTKPVTVYRLICKNTVEGRMLRRAEEKRAMQQMVIQS 1103 >gi|167517042|ref|XP_001742862.1| hypothetical protein [Monosiga brevicollis MX1] gi|163779486|gb|EDQ93100.1| predicted protein [Monosiga brevicollis MX1] Length = 470 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 73/201 (36%), Gaps = 27/201 (13%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------HDEKIKALEVIIE--KAN 67 E+ + + ++ ++ N V K++ L+ ++ KA Sbjct: 275 EDKALSSLLNMVMQFRKICNHPNLIARRPVRSPVTHAQLFVADCAKLQVLDDMLRRLKAG 334 Query: 68 AAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHP 116 +++ + L++ + ++ + I Sbjct: 335 GHRVLIYSQMTKMIDLLEEFLTHRQYKYVRLDGSSKISERRDMVADFQSRDDIFAFILST 394 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++F+ W+ +++ + R + G R V VY LI +N++ Sbjct: 395 RAGGIGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHRLGQTRTVTVYRLITRNSV 448 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +L R + KS + +++ Sbjct: 449 EERILARAQEKSKVHQMVIQG 469 >gi|62530240|gb|AAX85377.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus norvegicus] Length = 1924 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 949 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1008 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1009 ALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1068 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1069 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1122 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1123 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1164 >gi|293368877|ref|ZP_06615480.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|292636026|gb|EFF54515.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC 3f] Length = 946 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 21/206 (10%) Query: 4 YHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + L L F+ + ++ QL+ + +I Sbjct: 730 YEQEKNSLRNILLQHPQSTDRLHSFSVLNGILRLRQLSCHPQLILPDYTGTSGKTAQIIE 789 Query: 59 LEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + ++ +++ F L + G T ++ ++ + Sbjct: 790 TFDTL-QSEGHKVLIFSSFVRHLEVLAEAFHERGWKYTLLTGSTNNRPSEIAYFTDQKDV 848 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G GLNL + + WW+ E + R + G + V Y Sbjct: 849 QAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAYR 902 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I QN+I+E +L K + + + Sbjct: 903 FITQNSIEEKILHLQDEKRKLAETFV 928 >gi|195058262|ref|XP_001995418.1| GH23147 [Drosophila grimshawi] gi|193899624|gb|EDV98490.1| GH23147 [Drosophila grimshawi] Length = 1025 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 84/225 (37%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYYDEEKH--------W 48 K QR+ Y + ++I+ N A K ++ + N +D + Sbjct: 366 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDSH 425 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 97 DPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + G G+NL ++++ + W+ + ++ + Sbjct: 486 RNRQIQEFNMDNSTKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 539 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 540 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|159126264|gb|EDP51380.1| RSC complex subunit (Sth1), putative [Aspergillus fumigatus A1163] Length = 1406 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 + Y + + + D +G ++ ++ +L N ++ + Sbjct: 783 RLYKQLVTHNKMVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEPVEDQMNPGRGTNDL 842 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 843 IWRTAGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 902 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 903 RSDLLKLFNAPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQ-----DLQAQD 956 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 957 RAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1001 >gi|62530236|gb|AAX85375.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus norvegicus] gi|62530238|gb|AAX85376.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus norvegicus] Length = 1925 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 950 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1009 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1010 ALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1069 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1070 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1123 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1124 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1165 >gi|322708209|gb|EFY99786.1| Putative DNA helicase ino-80 [Metarhizium anisopliae ARSEF 23] Length = 1927 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 58/159 (36%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ K +++ + + +++ + Sbjct: 1650 DSGKLAKLDELLFKLKNEGHRVLLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKLEDRRD 1709 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1710 TVHDFQTRPEIFIFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1763 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1764 LGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVIQG 1802 >gi|324500144|gb|ADY40077.1| Chromodomain-helicase-DNA-binding protein 1 [Ascaris suum] Length = 1875 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 79/222 (35%), Gaps = 31/222 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y +L + N ++ + N A H++E Sbjct: 745 QYYKWILTKNYKELSKGVKGSINGFVNLIMELKKCCNHASLVRAYDHYEENAQARLQQLM 804 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 K+ L+ ++ + + +++ L +Q+ R + Sbjct: 805 KSSGKLILLDKLLCRLHETGHRVLIFSQMVMMLDIVQEYLQLRRFPSQRLDGSMRADLRK 864 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL + ++ F W+ + + ++R Sbjct: 865 AALDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAMSRA 918 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + +++E +++R + K + L++ + Sbjct: 919 HRIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLVIQRM 960 >gi|156051590|ref|XP_001591756.1| hypothetical protein SS1G_07202 [Sclerotinia sclerotiorum 1980] gi|154704980|gb|EDO04719.1| hypothetical protein SS1G_07202 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1805 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 73/230 (31%), Gaps = 56/230 (24%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWK-----------------EVHDEKIKAL 59 G+ + +L N +E H + +H K+ AL Sbjct: 1498 GDKEAKQHIFQALQYMRKLCNSPALVMKEGHKQYEDTQRLLAKQGTSLRDPIHAPKLTAL 1557 Query: 60 EVIIEKA-------------------NAAPIIVAYHFNSDLARLQK-------------A 87 ++ + +V L +Q Sbjct: 1558 RDLLVDCGIGTEPSSENEITTETSFVSPHRALVFCQMKEMLDMVQNDVLKKMLPSVQFLR 1617 Query: 88 FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +K + ++N + +L + G GLNL G + ++F W+ ++ Sbjct: 1618 MDGSVDANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQK--- 1673 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1674 --DLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKIDVASTVVN 1721 >gi|313233227|emb|CBY24342.1| unnamed protein product [Oikopleura dioica] Length = 1202 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 79/231 (34%), Gaps = 39/231 (16%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------- 52 Y KF +E L E ++ +S +L N + E Sbjct: 429 YIKFVKEKKRLLDTEGMQGPSSLQAITALKKLCNHPALVYPLINNPEYKFLQPYYKDFKP 488 Query: 53 -------DEKIKALEVII---EKANAAPIIVAYHFNSDLA----------RLQKAFPQGR 92 K L++I+ + ++ ++ L Sbjct: 489 DKFDPTLSGKFLLLDLILAITKMHTDDKFVLVSNYTQTLDTCQELCKLRGYGYVRLDGTM 548 Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + K + E+N + + + G GLNL G N L+ F W+ + Sbjct: 549 AIKKRSKLVAEFNSPESSDYVFMLSSKAGGCGLNL-IGANRLIMFDPDWNPAN-----DD 602 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G K+ F+Y L+A TI+E +LQR K + ++++A + + Sbjct: 603 QAMARVWRDGQKKRCFIYRLVAAGTIEEKMLQRQLHKKALSGVVVDAQEAD 653 >gi|156401565|ref|XP_001639361.1| predicted protein [Nematostella vectensis] gi|156226489|gb|EDO47298.1| predicted protein [Nematostella vectensis] Length = 1360 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 68/233 (29%), Gaps = 39/233 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVY----------------Y 42 K Y + L N + ++ + N Sbjct: 477 KFYRAILERNFAFLAKGTSSTANVPNLMNTMMELRKCCNHPFLITGAEEKILQEYGREHV 536 Query: 43 DEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD--- 97 D H K+ + ++ K ++V L L+ + + Sbjct: 537 DRHTHAMIEASGKLVLIHKLLPKLKLGGHKVLVFSQMVRCLDILEDYLVHMKYPYERIDG 596 Query: 98 -------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I +++ + + G G+NL + ++ F W+ + Sbjct: 597 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN----- 650 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G R+V VY LI +N+ + + R K + +L ++ + Sbjct: 651 DLQAQARCHRIGQSRSVKVYRLITRNSYEREMFDRASMKLGLDKAVLQSMNTK 703 >gi|295674887|ref|XP_002797989.1| SNF2 family helicase/ATPase PasG [Paracoccidioides brasiliensis Pb01] gi|226280639|gb|EEH36205.1| SNF2 family helicase/ATPase PasG [Paracoccidioides brasiliensis Pb01] Length = 857 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 28/221 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------KHWKEVHDEKI 56 K +R L + I + + ++ N + K+ Sbjct: 551 DKIERAKTAQLARKEIASKKLQNPVMQARLACNSPHNFYWPWDDDPSSVDSSLITSSGKM 610 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQE 103 L+ +I + I++ F + L + I Sbjct: 611 LLLDRLIPCLMSKNHKILIFSQFKTQLDILQDYAVYLRGWNCCRIDGAVSQVNRQAQIAA 670 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + G G+NL + ++ F W+ ++ + R + G Sbjct: 671 FNTDPSYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQT 724 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 725 KPVIVYRLATRGTVEQTLLEKADSKRKLEKLVIQKGKFKSL 765 >gi|168025390|ref|XP_001765217.1| SNF2 superfamily chromatin remodeling protein [Physcomitrella patens subsp. patens] gi|162683536|gb|EDQ69945.1| SNF2 superfamily chromatin remodeling protein [Physcomitrella patens subsp. patens] Length = 2041 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 53/226 (23%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKH-----------------WKEVHDEKIKALEVIIE 64 + + +L + + E++ + H K++AL I+E Sbjct: 1745 STHVFQALQYLRKLCSHPLLVLEDERQAARHVDAIAQSGAKDLHELHHAPKLQALRDILE 1804 Query: 65 KA----------------NAAPIIVAYHFNSDLARLQKAFPQGRTL-------------D 95 + +++ + L ++K Q D Sbjct: 1805 ECGIGVPAAAESSASPEGGHHRVLIFAQLKNFLDIIEKDLFQTHMKGVTYLRLDGSVESD 1864 Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 K ++ +N + I +L G GLNL + +VF W+ + + Sbjct: 1865 KRFDIVKAFNSDPTIDVLLLTTHVGGLGLNLTA-ADTVVFMEHDWNPMR-----DLQAMD 1918 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G KR V V+ LI + T++E ++ R K ++ + ++NA Sbjct: 1919 RAHRLGQKRVVNVHRLIMRGTLEEKIMSLQRFKISVANTVINAENA 1964 >gi|118096298|ref|XP_414088.2| PREDICTED: similar to chromatin remodeling factor CHROM1 [Gallus gallus] Length = 2891 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 70/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1105 KYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNP 1164 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1165 TAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1224 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1225 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1281 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY LI +N+ + + R K + +L ++ V Sbjct: 1282 ---DLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSV 1338 >gi|110738692|dbj|BAF01271.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] Length = 966 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 74/227 (32%), Gaps = 30/227 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------- 54 + Y Y L + + + ++ ++ + + +E Sbjct: 115 EYYKAIFTRNYQVLTKKGGAQISLNNIMMELRRVCCHPYMLEGVEPVIHDANEAFKQLLE 174 Query: 55 -----KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 ++ ++ K +++ F L L+ + + Sbjct: 175 SCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQI 234 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + + R Sbjct: 235 RIDRFNAKNSNKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAH 288 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G V +Y LI + TI+E ++Q + K ++ L++ LK + I+ Sbjct: 289 RLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNIN 335 >gi|302408325|ref|XP_003001997.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum VaMs.102] gi|261358918|gb|EEY21346.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum VaMs.102] Length = 857 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 45/213 (21%) Query: 26 ASKTVKCLQLANGAVYYD---------------------------EEKHWKEVHDEKIKA 58 +L N + E K W + + Sbjct: 562 LKAINILKKLCNHPDLLNLNDDLPGSENCWPDDYVPKDARGHRNREVKPWYSGKMQVLDR 621 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK 108 + I + I++ ++ L ++ ++K + ++N+ Sbjct: 622 MLARIRQDTNDKIVLISNYTQTLDIFERLCRSRAYGCLRLDGTMNVNKRQKLVDKFNDPA 681 Query: 109 I--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G G+NL G N LV F W+ Q + R + G K+ F Sbjct: 682 GEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCF 735 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY IA TI+E + QR K ++ ++++ + Sbjct: 736 VYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 768 >gi|156548320|ref|XP_001602898.1| PREDICTED: similar to chromodomain helicase DNA binding protein [Nasonia vitripennis] Length = 4629 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 27/232 (11%), Positives = 72/232 (31%), Gaps = 40/232 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + L A N + ++ + + + ++ Sbjct: 2121 KYYRGILERNFSFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNGAEDQIQLDYKHEKED 2180 Query: 53 -----------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-- 97 K+ ++ ++ K A+ ++V L L+ + + Sbjct: 2181 SESYYQALINSSGKMVLIDKLLPKLKASGHRVLVFSQMVKCLDLLEDYLVYKKYPYERID 2240 Query: 98 --------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I +++ + + G G+NL + ++ + W+ + Sbjct: 2241 GRIRGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN---- 2295 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V VY L+ +NT + + + K + +L ++ Sbjct: 2296 -DLQAQARCHRIGQQKMVKVYRLLCRNTYEREMFDKASLKLGLDKAILQSMN 2346 >gi|94707512|sp|Q8BYH8|CHD9_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 9; Short=CHD-9; AltName: Full=ATP-dependent helicase CHD9; AltName: Full=PPAR-alpha-interacting complex protein 320 kDa; AltName: Full=Peroxisomal proliferator-activated receptor A-interacting complex 320 kDa protein Length = 2885 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1107 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1166 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1167 SASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1226 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1227 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1283 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1284 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNV 1340 >gi|70998556|ref|XP_754000.1| RSC complex subunit (Sth1) [Aspergillus fumigatus Af293] gi|66851636|gb|EAL91962.1| RSC complex subunit (Sth1), putative [Aspergillus fumigatus Af293] Length = 1406 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 + Y + + + D +G ++ ++ +L N ++ + Sbjct: 783 RLYKQLVTHNKMVVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEPVEDQMNPGRGTNDL 842 Query: 55 ------KIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 843 IWRTAGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 902 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 903 RSDLLKLFNAPGSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQ-----DLQAQD 956 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 957 RAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 1001 >gi|299755713|ref|XP_001828834.2| DNA ATP-dependent helicase [Coprinopsis cinerea okayama7#130] gi|298411348|gb|EAU92841.2| DNA ATP-dependent helicase [Coprinopsis cinerea okayama7#130] Length = 1625 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++++ ++V + + +++ + + Sbjct: 1352 DSAKLARLDSLLQELKAGDHRVLVYFQMTRMMDLMEEYLIYRQYKYLRLDGSSKLEDRRD 1411 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I I + + G G+NL + ++F+ W+ + + R + Sbjct: 1412 MVIDWQTRPDIFVFLLSTRAGGLGINLTA-ADTVIFYDHDWNPSN-----DAQAMDRAHR 1465 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G R V VY LI + TIDE ++Q R K +QD+++ Sbjct: 1466 LGQTRQVTVYRLITKGTIDERIIQLARVKKDVQDIVVG 1503 >gi|73981363|ref|XP_533028.2| PREDICTED: similar to chromodomain helicase DNA binding protein 1-like [Canis familiaris] Length = 972 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 70/206 (33%), Gaps = 17/206 (8%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + E + + + + + ++ E + + Sbjct: 373 KYYKAILMKDLDAFESEMAKKVKLQNVLSQLRKCVDHPYLFEGETVPFFLTLLFMNIFVA 432 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPL 111 I A +++ L LQ ++ I+ + + + + Sbjct: 433 NII-AQGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPVFV 491 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+NL + ++F ++ + + R + G ++V V LI Sbjct: 492 FLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQNKSVKVIRLI 545 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 ++T++E+V ++ +K + + ++ Sbjct: 546 GRDTVEEIVYRKAASKLQLTNAIIEG 571 >gi|326932279|ref|XP_003212247.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like, partial [Meleagris gallopavo] Length = 1949 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 65/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + + Sbjct: 933 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGN 992 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 993 SLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1052 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1053 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1106 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1107 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1148 >gi|322707957|gb|EFY99534.1| recombinational repair protein [Metarhizium anisopliae ARSEF 23] Length = 807 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 72/212 (33%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVYYD-----------------------EEKHWKEVHDEKIKALEVI 62 +L N + ++ + + K+ L+ + Sbjct: 513 LKAINILKKLCNHPDLLNLSDDLPGSECCFPPEYIPKEARGRDRDVRPEYSGKMMVLDRM 572 Query: 63 I---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 + + I++ ++ S L ++ ++K + +N+ Sbjct: 573 LARIRQDTNDKIVLISNYTSTLDLFERLCRSREYGCLRLDGTMNVNKRQKLVDRFNDPNG 632 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 633 EEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 686 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 687 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 718 >gi|327350928|gb|EGE79785.1| lymphocyte-specific helicase [Ajellomyces dermatitidis ATCC 18188] Length = 893 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 75/220 (34%), Gaps = 28/220 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------DEKIK 57 K ++ L + I + + ++ N + H K+ Sbjct: 590 KIEKTKTAQLAKKEIASKKLQNPVMQARLACNSPHNFYWPWDDDPSHIDESLITSSGKML 649 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEW 104 L+ +I + I++ F + L + IQ + Sbjct: 650 LLDRLIPCLMSKGHKILIFSQFKTQLDLLQDYATYLRGWNCCRIDGAVSQVDRQAQIQAF 709 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N + + G G+NL + ++ F W+ ++ + R + G + Sbjct: 710 NTNQDYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTK 763 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 764 PVIVYRLATRGTVEQTLLEKADSKRRLEKLVIQKGKFKSL 803 >gi|116207742|ref|XP_001229680.1| hypothetical protein CHGG_03164 [Chaetomium globosum CBS 148.51] gi|88183761|gb|EAQ91229.1| hypothetical protein CHGG_03164 [Chaetomium globosum CBS 148.51] Length = 1852 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 77/249 (30%), Gaps = 59/249 (23%) Query: 1 MKQYHKFQR---ELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWK------ 49 +K + F + + + G+ + +L N + H Sbjct: 1523 LKLFEDFTKREGQKLSEQAGKEDKEAKQHIFQALQYMRKLCNSPALVMKPGHRSYEDTQR 1582 Query: 50 -----------EVHDEKIKALEVIIEKA-----------------NAAPIIVAYHFNSDL 81 H K+ AL ++ ++ L Sbjct: 1583 FLAKQNTSLEDPAHAPKLTALRDLLVDCGIGTEGQDSSDPLYTPIKPHRALIFCQMKEML 1642 Query: 82 ARLQKAFPQGRTL-------------DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 +Q Q ++ + ++N + +L + G GLNL Sbjct: 1643 DMVQNTVLQKMLPTTQYLRLDGSVEANRRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT- 1701 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R K Sbjct: 1702 GADTVIFVEHDWNPQK-----DLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFK 1756 Query: 188 STIQDLLLN 196 + ++N Sbjct: 1757 IDVASTVVN 1765 >gi|292498|gb|AAA80560.1| transcription activator [Homo sapiens] Length = 769 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LNALK 199 + + Sbjct: 647 IQQGR 651 >gi|221487102|gb|EEE25348.1| chromodomain helicase DNA binding protein, putative [Toxoplasma gondii GT1] Length = 2325 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 74/228 (32%), Gaps = 30/228 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKE--------- 50 +K Y + + L + +S ++ ++ N ++ Sbjct: 1218 LKFYRLILTKNFDLLAKKGGGNRSSLQNICMELKKVCNHPFLCQSPDEEEDAEEWRRLLV 1277 Query: 51 VHDEKI--KALEVIIEKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDK---------DP 98 K+ + K +++ L + +G + Sbjct: 1278 DGSAKMGLLDKLLKRLKEKGHRVLIFSQMVKMLNLLAEFLKMRGYKHQRLDGTMAKEVRR 1337 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +N + G G+NL + ++ F W+ + + R Sbjct: 1338 KAMEHFNAKNSEDFCFLLSTKAGGLGINLTS-ADTVIIFDSDWNPQN-----DLQAEARA 1391 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G R V +Y L+ +++I++ +L+R + K + L++ L + + Sbjct: 1392 HRIGQTRTVQIYRLVTKDSIEQTILERAKAKMVLDTLVVQGLNQRNVD 1439 >gi|149248292|ref|XP_001528533.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces elongisporus NRRL YB-4239] gi|146448487|gb|EDK42875.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces elongisporus NRRL YB-4239] Length = 917 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 84/225 (37%), Gaps = 38/225 (16%) Query: 7 FQRELYCDLQGENIEAFNSASK----------TVKCLQLANGAVYYDEEK--------HW 48 QR LY + ++I+A N A+K ++ + N +D + Sbjct: 265 MQRNLYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPYLFDGVEPGPPFTTDEH 324 Query: 49 KEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 + +K+ L+ ++ KA + +++ + L L+ Sbjct: 325 LVFNAQKMIILDKLLKKFKAEGSRVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTEHVD 384 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+N+ + + G G+NL +I++ F W+ + + + Sbjct: 385 RINAIDEYNKPGSEKFVFLLTTRAGGLGINLTS-ADIVILFDSDWNPQA-----DLQAMD 438 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V V+ I +N I+E VL+R K + L++ + Sbjct: 439 RAHRIGQTKQVKVFRFITENAIEEKVLERAAQKLRLDQLVIQQGR 483 >gi|84043448|ref|XP_951514.1| transcription activator [Trypanosoma brucei TREU927] gi|33348313|gb|AAQ15639.1| transcription activator, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|62359085|gb|AAX79532.1| transcription activator, putative [Trypanosoma brucei] gi|261326368|emb|CBH09327.1| transcription activator, putative [Trypanosoma brucei gambiense DAL972] Length = 1160 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 74/229 (32%), Gaps = 40/229 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS---------KTVKCLQLANGAVYYDE--------EKHW 48 K QR Y + ++ E N S + ++ N D Sbjct: 415 KVQRRWYMQVLAKDAEVLNKGSGGSSAFLTNTLMSLRKVINHPYMMDGGEEGPPFITDER 474 Query: 49 KEVHDEKIKALEVIIE-----KANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + K+ L+ ++ + +++ F S L L+ + Sbjct: 475 IVKYSGKMLLLDKLLHRLRRDEKEGHKVLIFSQFTSMLDILEDYCSMRGFKVCRIDGSTS 534 Query: 94 LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +N K + + G G+NLQ N ++ + W+ + ++ Sbjct: 535 GYDRDSQMAAFNAPKSDYFIFLLSTRAGGLGINLQA-ANNVIIYDSDWNPQ-----MDLQ 588 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G KR V VY + T++E + R K + +++ + Sbjct: 589 AQDRAHRIGQKRVVRVYRFVTDGTVEERIYHRALKKLYLDAMVVQQGRA 637 >gi|71020091|ref|XP_760276.1| hypothetical protein UM04129.1 [Ustilago maydis 521] gi|46099924|gb|EAK85157.1| hypothetical protein UM04129.1 [Ustilago maydis 521] Length = 983 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 83/225 (36%), Gaps = 40/225 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 K Y RE + I+ + + ++ ++ N +D + Sbjct: 658 KLYS--VREA-----QKQIKNMHLDNTVMQARKICNHPFLFDWPVDKESGTLVVNKDLIN 710 Query: 53 -DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDP 98 K+ L ++++ +++ F + L ++ + D+ Sbjct: 711 ASGKMLMLNRLLDELFHRGHKVLIFSQFTTMLDIIEDWANEFKRLRTCRIDGTTPQDERR 770 Query: 99 CTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +NE K L + G G+NL + ++F+ W+ + ++ Sbjct: 771 AQMKSFNEDKGRDACNLFLLSTRAGGLGINLVA-ADTVIFYDSDWNPQ-----MDLQAQD 824 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G R ++ L++ +T++E +L+R K ++ L++ K Sbjct: 825 RVHRIGQTRPCLIFRLVSASTVEERILRRAGNKRKLEALVIQQGK 869 >gi|255086381|ref|XP_002509157.1| SNF2 super family [Micromonas sp. RCC299] gi|226524435|gb|ACO70415.1| SNF2 super family [Micromonas sp. RCC299] Length = 1814 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 75/221 (33%), Gaps = 46/221 (20%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK--------EVHDEKIKALEVII---- 63 + + A + +L + E K E K AL+ I+ Sbjct: 1517 ESASGAATHVFQALQYLRKLCSHPRLVTEGDGKKGKKAKPTAETMSPKFMALKQILLDCG 1576 Query: 64 --------------EKANAAPIIVAYHFNSDLARLQKAFPQG-------------RTLDK 96 ++++ +++ S L ++ Sbjct: 1577 IGEDPLAEKDPDQKQESSGHRVLIFSQLKSLLDLVEDELFGHLLKGVSWLRLDGSVAPTA 1636 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++++N + I +L G GLNL + +VF W+ ++ + + R Sbjct: 1637 RFDVVRKFNADPSIDVLLLTTHVGGLGLNLTS-ADTVVFLEHDWNPQK-----DLQAMDR 1690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR V V+ L+ + T++E ++ R K + + ++N Sbjct: 1691 AHRLGQKRTVNVFRLLTKGTLEEKIMGLQRFKLDVANAVVN 1731 >gi|211853152|gb|AAI68553.1| chd9 protein [Xenopus (Silurana) tropicalis] Length = 2753 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 70/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 974 KYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRETYNQ 1033 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1034 MAADFYLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLMHKRYLYER 1093 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1094 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1150 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY LI +N+ + + R K + +L ++ V Sbjct: 1151 ---DLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSV 1207 >gi|293340184|ref|XP_001079343.2| PREDICTED: chromodomain helicase DNA binding protein 3 [Rattus norvegicus] Length = 2046 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 1071 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1130 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1131 ALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1190 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1191 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1244 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1245 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1286 >gi|237831501|ref|XP_002365048.1| chromodomain helicase DNA binding protein, putative [Toxoplasma gondii ME49] gi|211962712|gb|EEA97907.1| chromodomain helicase DNA binding protein, putative [Toxoplasma gondii ME49] gi|221506789|gb|EEE32406.1| chromodomain helicase DNA binding protein, putative [Toxoplasma gondii VEG] Length = 2279 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 74/228 (32%), Gaps = 30/228 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKE--------- 50 +K Y + + L + +S ++ ++ N ++ Sbjct: 1218 LKFYRLILTKNFDLLAKKGGGNRSSLQNICMELKKVCNHPFLCQSPDEEEDAEEWRRLLV 1277 Query: 51 VHDEKI--KALEVIIEKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDK---------DP 98 K+ + K +++ L + +G + Sbjct: 1278 DGSAKMGLLDKLLKRLKEKGHRVLIFSQMVKMLNLLAEFLKMRGYKHQRLDGTMAKEVRR 1337 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +N + G G+NL + ++ F W+ + + R Sbjct: 1338 KAMEHFNAKNSEDFCFLLSTKAGGLGINLTS-ADTVIIFDSDWNPQN-----DLQAEARA 1391 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G R V +Y L+ +++I++ +L+R + K + L++ L + + Sbjct: 1392 HRIGQTRTVQIYRLVTKDSIEQTILERAKAKMVLDTLVVQGLNQRNVD 1439 >gi|123241655|emb|CAI35987.2| chromodomain helicase DNA binding protein 3 [Mus musculus] Length = 1885 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 952 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1011 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1012 ALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1071 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1072 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1125 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1126 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1167 >gi|149053041|gb|EDM04858.1| chromodomain helicase DNA binding protein 3 [Rattus norvegicus] Length = 1827 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 817 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 876 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 877 ALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 936 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 937 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 990 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 991 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1032 >gi|148678548|gb|EDL10495.1| mCG140617 [Mus musculus] Length = 1826 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 816 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 875 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 876 ALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 935 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 936 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 989 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 990 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1031 >gi|148679122|gb|EDL11069.1| mCG141427 [Mus musculus] Length = 2699 Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1107 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1166 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1167 SASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1226 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1227 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1283 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1284 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNV 1340 >gi|225682464|gb|EEH20748.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Paracoccidioides brasiliensis Pb03] Length = 1120 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 429 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 488 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKD 97 + K+ L+ I+ K + +++ + L + Sbjct: 489 IDNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQYCRIDGSTAHEDR 548 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ + W+ + + + R Sbjct: 549 IAAIDEYNRPGSEKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 602 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 603 AHRIGQTKQVVVFRFVTENAIEEKVLKRAAQKLRLDQLVIQQGRAQ 648 >gi|242818381|ref|XP_002487106.1| RSC complex subunit (Sth1), putative [Talaromyces stipitatus ATCC 10500] gi|218713571|gb|EED12995.1| RSC complex subunit (Sth1), putative [Talaromyces stipitatus ATCC 10500] Length = 1420 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 76/225 (33%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + D +G I ++ ++ +L N ++ + Sbjct: 799 KLYKQLLTHNKMVVSDGKGGKIGMRGLSNMLMQMRKLCNHPFVFEPVEDQMNPGRGTNDL 858 Query: 55 ------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ ++ K +++ + + ++ D Sbjct: 859 IWRTAGKFELLDRVLPKFKATGHRVLLFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDD 918 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ + W+ + + Sbjct: 919 RSELLKLFNAPNSDYFCFLLSTRAGGLGLNLQT-ADTVIIYDSDWNPHQ-----DLQAQD 972 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI N+++E +L R + K + ++ A K Sbjct: 973 RAHRIGQKNEVRILRLITSNSVEEKILGRAQFKLDMDGKVIQAGK 1017 >gi|255932145|ref|XP_002557629.1| Pc12g07960 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582248|emb|CAP80423.1| Pc12g07960 [Penicillium chrysogenum Wisconsin 54-1255] Length = 937 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 60/169 (35%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRT------ 93 Y++E E+ KI+ L I+ +A IV F S L +++ Sbjct: 691 IYNDEGENGELPSTKIRHLMRILNREAPDFKFIVFSVFTSMLDKIEPFLKTANIGFARYD 750 Query: 94 -----LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ + N +L + GLNL + +V +W+ + Sbjct: 751 GGMANNHREASLEKLRNNSGTRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FV 804 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E + R + V +Y ++ + T++E ++ K + + + Sbjct: 805 EEQAIDRVHRLNQTIDVKIYKMVIKGTVEERIVALQDRKRELANATIEG 853 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 14/43 (32%), Gaps = 4/43 (9%) Query: 4 YHKFQRE----LYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + ++ L + G ++ + ++ Q N Sbjct: 564 YKRLEQRTDNSLEKMMGGAKVDYAGALVLLLRLRQSCNHPDLV 606 >gi|108708155|gb|ABF95950.1| transcriptional activator, putative, expressed [Oryza sativa Japonica Group] Length = 1457 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 69/172 (40%), Gaps = 19/172 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---- 90 + + + K++ L++++ + A +++ L L+ Sbjct: 1122 SSPPMSNFDPAKMLTDSGKLQTLDILLRRLRAENHRVLLFAQMTKMLDILEDYMNFRKFK 1181 Query: 91 -------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 D+ N I + + G G+NL + ++F+ + W+ + Sbjct: 1182 YFRLDGSSAISDRRDMVRDFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYEIDWNPTQ 1240 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q + R + G + V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1241 DQ-----QAMDRTHRLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVM 1287 >gi|308499699|ref|XP_003112035.1| CRE-RAD-54 protein [Caenorhabditis remanei] gi|308268516|gb|EFP12469.1| CRE-RAD-54 protein [Caenorhabditis remanei] Length = 1096 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 78/234 (33%), Gaps = 47/234 (20%) Query: 3 QYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------------- 44 Y+K +++ + + A ++ S +L N E Sbjct: 747 LYNKLIECEKQNRIVEKDKGATA-SALSFITHLKKLCNHPYLVYEEFQKPDNRFRNKCLP 805 Query: 45 -------EKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAF------ 88 K + K+K L+ I+ K ++ ++ + + Sbjct: 806 VFPEAFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMALCKLRGYD 865 Query: 89 ----PQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 ++ + + +N+ I + G GLNL G N LV F W+ Sbjct: 866 FVRLDGSMSIKQRSKIVDTFNDPSSTIFCFLLSSKAGGCGLNL-IGANRLVMFDPDWNPA 924 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ F+Y L+A +I+E + QR K + +++ Sbjct: 925 N-----DDQAMARVWRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSSCVVS 973 >gi|219518574|gb|AAI45220.1| Chd9 protein [Mus musculus] Length = 2884 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1107 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1166 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1167 SASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1226 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1227 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1283 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1284 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNV 1340 >gi|196000388|ref|XP_002110062.1| hypothetical protein TRIADDRAFT_53632 [Trichoplax adhaerens] gi|190588186|gb|EDV28228.1| hypothetical protein TRIADDRAFT_53632 [Trichoplax adhaerens] Length = 1207 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 66/228 (28%), Gaps = 38/228 (16%) Query: 3 QYHK-FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE---------------EK 46 Y + + + + ++ + ++ N + Sbjct: 676 VYQQYLKSDEVAGIIDG---RNHAFGGLITLRKICNHPHLTNISVPRVAKVNVDSEIIRS 732 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQGRTL 94 + K+ AL+ ++ + N +++ F + Sbjct: 733 DGHWLLSGKMIALKTLLSLWRENKHRVLLFTQTRQMANILEKFVKSENYPYMRMDGTTNI 792 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ +N I + G GLNL G + +V F W+ Sbjct: 793 SSRQSLVKLFNRNNAIFIFILTTRVGGLGLNLT-GADRVVIFDPDWNPSTDM-----QAR 846 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V +Y + TI+E + R K + + +L K+ Sbjct: 847 ERAWRVGQTKEVTIYRFLTSGTIEEKIYHRQVFKEFLTNRILKNPKQR 894 >gi|39977783|ref|XP_370279.1| hypothetical protein MGG_06776 [Magnaporthe oryzae 70-15] gi|206558153|sp|A4R227|INO80_MAGO7 RecName: Full=Putative DNA helicase INO80 gi|145013701|gb|EDJ98342.1| hypothetical protein MGG_06776 [Magnaporthe oryzae 70-15] Length = 1944 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 60/157 (38%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDP 98 + K+ L+ ++ K +++ + + +++ + D+ Sbjct: 1657 NSGKLAKLDELLFKLKAGGHRVLLYFQMTRMIDLMEEYLTYRNWKYCRLDGSTKFEDRRD 1716 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1717 TVHDFQTNPSIFVFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1770 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1771 LGQTRQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1807 >gi|194391058|dbj|BAG60647.1| unnamed protein product [Homo sapiens] Length = 434 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 188 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 247 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 248 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 307 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 308 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRVGQN 361 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 362 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 396 >gi|325088122|gb|EGC41432.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces capsulatus H88] Length = 1112 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 419 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 478 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKD 97 + K+ L+ I+ K + +++ + L + Sbjct: 479 IDNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQYCRIDGSTAHEDR 538 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ + W+ + + + R Sbjct: 539 IAAIDEYNRPGSEKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 592 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 593 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 638 >gi|268536304|ref|XP_002633287.1| Hypothetical protein CBG06016 [Caenorhabditis briggsae] Length = 1369 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 74/225 (32%), Gaps = 35/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-------- 54 Y +R D + A + + + +L N + + H Sbjct: 821 IYRHMKRGYLLD-SKSSCGARSLMNTIIHLRKLCNHPFLFQNIEESCRSHWNVNFVSGVN 879 Query: 55 ------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ I+ K +++ + + + + D+ Sbjct: 880 LIRVAGKLELLDRILPKLKATGHRVLMFFQMTTMMTIFEDYLNFRQYTYLRLDGSTKPDE 939 Query: 97 DPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + Sbjct: 940 RGELLKMFNAPDSKYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQD 993 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 994 RAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGK 1038 >gi|328862601|gb|EGG11702.1| hypothetical protein MELLADRAFT_115234 [Melampsora larici-populina 98AG31] Length = 1138 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 84/232 (36%), Gaps = 39/232 (16%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYYDEEK-------- 46 + QR+ Y + ++I+A N + ++ + N +D + Sbjct: 448 EMQRKWYKMILEKDIDAVNGVTGKKEGKTRLMNVVMQLRKCCNHPYLFDGAEPGPPFTTD 507 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTL 94 + K+ L+ ++ KA + +++ + L Sbjct: 508 EHLVFNSGKMIILDKLLKAMKAKGSRVLIFSQMSRVLDILEDYCLFREYEYCRIDGSTQH 567 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I E+N+ + + G G+NL +I+V F W+ + + Sbjct: 568 EERIGAIDEYNKEGSSKFIFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQA-----DLQA 621 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + R + G K+ V+V+ + +N ++E VL+R K + L++ + Sbjct: 622 MDRAHRIGQKKQVYVFRFVTENAVEEKVLERAAQKLRLDQLVIQQGRANVAQ 673 >gi|309363526|emb|CAP26346.2| hypothetical protein CBG_06016 [Caenorhabditis briggsae AF16] Length = 1380 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 74/225 (32%), Gaps = 35/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-------- 54 Y +R D + A + + + +L N + + H Sbjct: 828 IYRHMKRGYLLD-SKSSCGARSLMNTIIHLRKLCNHPFLFQNIEESCRSHWNVNFVSGVN 886 Query: 55 ------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ I+ K +++ + + + + D+ Sbjct: 887 LIRVAGKLELLDRILPKLKATGHRVLMFFQMTTMMTIFEDYLNFRQYTYLRLDGSTKPDE 946 Query: 97 DPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G GLNLQ + ++ F W+ + Sbjct: 947 RGELLKMFNAPDSKYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQD 1000 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 1001 RAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGK 1045 >gi|294056083|ref|YP_003549741.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] gi|293615416|gb|ADE55571.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] Length = 1133 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 67/212 (31%), Gaps = 24/212 (11%) Query: 6 KFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + + E+ E + + ++ Q+ K + + Sbjct: 915 EVREEIAAAYDDQPEQQAGIVALAAILRLRQVCVSPELL---GKQLPEPAPKFVYMGDRL 971 Query: 64 EKAN--AAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP- 110 E+ +V F + + + ++ + G P Sbjct: 972 EELQAEGNAALVFSQFIGGLDQMEAIARERGVDYLRMDGRTPVGQRREIVRSFQSGDGPS 1031 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 F + G GLNL N + WW+ +E R + G R+VFV L Sbjct: 1032 FFFISLKTGGVGLNLTR-ANYVFHLDPWWNPA-----VENQASDRAHRIGQTRSVFVQRL 1085 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 I Q++I+ +L+ K+ + L++ + T Sbjct: 1086 IMQHSIEARMLELKARKAELFRQLVDEPGRRT 1117 >gi|302816879|ref|XP_002990117.1| hypothetical protein SELMODRAFT_131060 [Selaginella moellendorffii] gi|300142130|gb|EFJ08834.1| hypothetical protein SELMODRAFT_131060 [Selaginella moellendorffii] Length = 700 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 27/216 (12%), Positives = 72/216 (33%), Gaps = 31/216 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVH----- 52 + Y + Y L+ + + ++ ++ N E + +H Sbjct: 257 EYYRALLTKNYQLLRQGTKSQQSMINIIMQLRKVCNHPYLIPGTEPESGTGEFLHEMRIK 316 Query: 53 -DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKD 97 K+ L ++ K +++ L L+ + + Sbjct: 317 ASAKLTLLHSMLGSLKKEGHRVLIFSQMTKLLDILEDYLTFEFGHDSYERVDGSVPVAER 376 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N+ + SCG G+NL + ++ + ++ + + R Sbjct: 377 QAAIRRYNKDTSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNP-----HADIQAMNRA 430 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + + VY L+ + +++E +L + K ++ Sbjct: 431 HRIGQSKKLLVYRLLVRGSVEERILHLAKKKLELEQ 466 >gi|323508306|emb|CBQ68177.1| related to INO80-ATPase with chromatin remodeling and helicase activity [Sporisorium reilianum] Length = 1910 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 66/159 (41%), Gaps = 19/159 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKD 97 V K+ L++++ + AN +++ + + +++ + D+ Sbjct: 1581 VDSSKMAKLDMLLRELKANGHRVLIYFQMTRMIDLMEEYLIYRQYKYLRLDGASKISDRR 1640 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ + + G G+NL + ++F+ W+ + + R Sbjct: 1641 DMVTDWQTKPELFIFLLSTRAGGLGINLTA-ADTVIFYDHDWNPSN-----DSQAMDRAH 1694 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY LI + TIDE +++ R K +QD+++ Sbjct: 1695 RLGQTKQVTVYRLITKGTIDERIVRLARNKKEVQDIVVG 1733 >gi|58266666|ref|XP_570489.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134110324|ref|XP_775989.1| hypothetical protein CNBD0390 [Cryptococcus neoformans var. neoformans B-3501A] gi|74685408|sp|Q5KHM0|INO80_CRYNE RecName: Full=Putative DNA helicase INO80 gi|50258657|gb|EAL21342.1| hypothetical protein CNBD0390 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226722|gb|AAW43182.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 1765 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 62/169 (36%), Gaps = 19/169 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-------- 90 + V K+ L+ ++ + +++ + + +++ Sbjct: 1440 LHIPPTKRLIVDSAKLARLDSLLRELKAGGHRVLLYFQMTKMMDLIEEYLIFRQYKYLRL 1499 Query: 91 ---GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ I + + G G+NL + ++F+ W+ Sbjct: 1500 DGSSPIAERRDMVTSWQTNPDIFVFCLSTRAGGLGINLTA-ADTVIFYDHDWNPSS---- 1554 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G + V VY L+A+ TI+E +LQ R K IQD+++ Sbjct: 1555 -DAQAMDRAHRVGQTKQVTVYRLVARGTIEERILQMARGKKDIQDVVVG 1602 >gi|114558328|ref|XP_001157874.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform 5 [Pan troglodytes] Length = 877 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 + Y + + E + + + + + + E Sbjct: 288 RYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASG 347 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 348 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 407 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + I + + G G+NL + ++F ++ + + R + G Sbjct: 408 NFGRQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 461 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 462 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|121702625|ref|XP_001269577.1| TBP associated factor (Mot1), putative [Aspergillus clavatus NRRL 1] gi|119397720|gb|EAW08151.1| TBP associated factor (Mot1), putative [Aspergillus clavatus NRRL 1] Length = 1901 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 78/249 (31%), Gaps = 60/249 (24%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------ 50 K + F ++ LQ + + + +L N +E H + Sbjct: 1573 KLFEDFTKKEQKALQDKVGSSEKSDKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQQY 1632 Query: 51 -----------VHDEKIKALEVIIEKA------------------NAAPIIVAYHFNSDL 81 H K+ AL ++ + ++ L Sbjct: 1633 LTAKHSQIRDVAHAPKLGALRDLLVDCGIGVDPPSEGDLSSASYVSPHRALIFCQMKEML 1692 Query: 82 ARLQKAFPQ-------------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 +Q + K + +N + +L + G GLNL Sbjct: 1693 DIVQSEVFKKLLPSVQFLRLDGSVEATKRQDIVNRFNTDPSYDVLLLTTSVGGLGLNLT- 1751 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R K Sbjct: 1752 GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1806 Query: 188 STIQDLLLN 196 + ++N Sbjct: 1807 IDVASTVVN 1815 >gi|73946643|ref|XP_860337.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 20 [Canis familiaris] Length = 1550 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 73/223 (32%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y Q + G + A + ++ ++ N + + Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGGAKTLMNTIMQLRKICNHPYMFQHIEGLVRPPASRSCR 1022 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K A +++ S + ++ F + Sbjct: 1023 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1082 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++++NE + + G GLNLQ + +V F W+ + + Sbjct: 1083 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQAQD 1136 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1179 >gi|49389246|dbj|BAD25208.1| putative SNF2 domain-containing protein [Oryza sativa Japonica Group] Length = 2057 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 85/261 (32%), Gaps = 67/261 (25%) Query: 1 MKQYHKF-----QRELYCDLQGENIE--------AFNSASKTVKCLQLANGAVYYDEEKH 47 +K Y KF ++E+ ++ ++ + L+L + + E Sbjct: 1725 LKLYDKFSNSNAKQEISTIVKENELDQSTSQPKATRHVFQALQYLLKLCSHPLLVTGESP 1784 Query: 48 WKEV-------------------HDEKIKALEVIIEKAN---------------AAPIIV 73 + H K+ AL+ I+++ +++ Sbjct: 1785 PDYLVDLLKEIGMGTGDELHDLHHSPKLVALQEILQECGIGSEISSPDASAAIGQHRVLI 1844 Query: 74 AYHFN-------------SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 + +K ++ +N + I +L Sbjct: 1845 FAQHKALLDIIEKDLFQSHMRSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVG 1904 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + LVF W+ M + + R + G ++ V V+ LI + T++E Sbjct: 1905 GLGLNLTS-ADTLVFMEHDWNP-----MKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEK 1958 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R K ++ + ++NA Sbjct: 1959 VMSLQRFKVSVANAVINAENA 1979 >gi|320590071|gb|EFX02516.1| chromatin remodeling complex subunit [Grosmannia clavigera kw1407] Length = 1931 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 65/198 (32%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEKAN--AAPIIVAY 75 ++ + Y++ K V K+ L +++ K +++ Sbjct: 1198 LMQLRKCLCHPFIYNDAIEEKTVDQATMVQNLVEASSKLVLLRIMLPKLKARGRRVLLFS 1257 Query: 76 HFNS----------DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 F L + + I +N PL + G G+ Sbjct: 1258 QFLHQLDIVEDFLTILGLPYGRLDGSMSSMEKQKRIDAFNAPDSPLFAFLLSTRAGGVGI 1317 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + +R + G K V + L+ +++++E ++Q Sbjct: 1318 NL-ATADTVIVMDPDFNPHQDM-----QAFSRAHRIGQKNHVLCFQLVTKDSVEEKIMQV 1371 Query: 184 LRTKSTIQDLLLNALKKE 201 R K + L+ ++ E Sbjct: 1372 GRKKMALDHALIESMDAE 1389 >gi|125586260|gb|EAZ26924.1| hypothetical protein OsJ_10853 [Oryza sativa Japonica Group] Length = 1396 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 69/172 (40%), Gaps = 19/172 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---- 90 + + + K++ L++++ + A +++ L L+ Sbjct: 1122 SSPPMSNFDPAKMLTDSGKLQTLDILLRRLRAENHRVLLFAQMTKMLDILEDYMNFRKFK 1181 Query: 91 -------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 D+ N I + + G G+NL + ++F+ + W+ + Sbjct: 1182 YFRLDGSSAISDRRDMVRDFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYEIDWNPTQ 1240 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q + R + G + V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1241 DQ-----QAMDRTHRLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVM 1287 >gi|303281098|ref|XP_003059841.1| dexh-box helicase [Micromonas pusilla CCMP1545] gi|226458496|gb|EEH55793.1| dexh-box helicase [Micromonas pusilla CCMP1545] Length = 2006 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 66/182 (36%), Gaps = 19/182 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR--- 83 A + ++ + K++AL ++ K+ ++ L Sbjct: 1350 LTPLRAAAVRQQLFFPDRRLVQFDCGKLQALAQLLRTLKSGGHKALIFTQMTKMLDILEA 1409 Query: 84 -------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ +Q +N + ++ + S G G+NL G + ++F+ Sbjct: 1410 FLNLYGYPYCRLDGSTRPEQRQILMQRYNTDPRLFVFILSTRSGGFGINLT-GADTVIFY 1468 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +++ R + G R V +Y ++ + TI+E +L++ K + + Sbjct: 1469 DSDWNPA-----MDQQAQDRAHRIGQTRPVRIYRMVCKGTIEENILKKSMQKRELDHFAI 1523 Query: 196 NA 197 A Sbjct: 1524 QA 1525 >gi|74008359|ref|XP_538168.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 1 [Canis familiaris] Length = 1054 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVELLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LNALK 199 + + Sbjct: 647 IQQGR 651 >gi|167517999|ref|XP_001743340.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778439|gb|EDQ92054.1| predicted protein [Monosiga brevicollis MX1] Length = 927 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 82/232 (35%), Gaps = 40/232 (17%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYD------ 43 K Y + QR+ Y + ++IEA N + ++ + N +D Sbjct: 302 KVYVGLSRMQRDWYKKILAKDIEAVNGAGKMEKMRLLNILMQLRKCCNHPYLFDGAEPGP 361 Query: 44 ----EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 ++ + + + + +++ L L+ Sbjct: 362 PFTTDQHLIDNCGKMLVLDKLLKKLQEQGSRVLIFSQMTRMLDILEDYCWWRNYNYCRID 421 Query: 91 -GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + D I E+N + + + G G+NL ++++ F W+ + Sbjct: 422 GSTSHDVRNEMIDEYNKENSEKFIFMLSTRAGGLGINL-ATADVVILFDSDWNPQ----- 475 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ R + G K+ V ++ LI + T++E ++++ K + +++ + Sbjct: 476 MDLQAQDRAHRIGQKKQVRIFRLITEGTVEERIVEKAEMKLRLDAMVIQQGR 527 >gi|296414511|ref|XP_002836943.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632788|emb|CAZ81134.1| unnamed protein product [Tuber melanosporum] Length = 1444 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 75/224 (33%), Gaps = 35/224 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y Y L G + + ++ +++N + + + + + Sbjct: 671 EYYKAIITRNYAALNAGATGPKQSLLNIVMELKKISNHPFMFPPAEQRILGGSNRREDVL 730 Query: 61 VIIEKANA----------------APIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 + ++ ++V L L + Sbjct: 731 KALIMSSGKMVLLDQLLTKLKADNHRVLVFSQMVHMLDILADYLNLKGFSFQRLDGTIAA 790 Query: 98 ---PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I +N + P + G G+NL + ++ F W+ + + Sbjct: 791 GPRRIAIDHFNAPESPDFCFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQA 844 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY L++++TI+E VL+R R K ++ L+++ Sbjct: 845 MARAHRIGQKAHVMVYRLVSKDTIEEEVLERARNKMILEHLVIS 888 >gi|170593189|ref|XP_001901347.1| DNA excision repair protein ERCC-6 [Brugia malayi] gi|158591414|gb|EDP30027.1| DNA excision repair protein ERCC-6, putative [Brugia malayi] Length = 1103 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 78/224 (34%), Gaps = 40/224 (17%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------------DE 44 K Y ++ RE L G+ ++ + +L N +E Sbjct: 499 KLYEEYLSSRECDRILSGK----MDAFVGLITLRKLCNHPDLVTGGPNKFNDYDVTADEE 554 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDL---------ARLQKAFPQGRT 93 K++ L+ ++ K +++ L R + G T Sbjct: 555 MGFGAPCRSGKMQVLKALLKLWKRQGQKVLLFSQSRQMLTILEKFVIQERYEYLRMDGTT 614 Query: 94 LDK-DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + ++E+N KI + G G+NL G N +V F W+ + Sbjct: 615 VVRSRQLLVEEFNKNNKIFIFLLTTRVGGLGINLT-GANRVVIFDPDWNPST-----DIQ 668 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G +RAV +Y L+ TI+E + R K + + +L Sbjct: 669 ARERAWRIGQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRIL 712 >gi|74008357|ref|XP_865363.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform b isoform 7 [Canis familiaris] Length = 1033 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 392 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 451 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 452 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 511 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 512 DGQTPHEEREDKFLEVELLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 570 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 571 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 625 Query: 195 LNALK 199 + + Sbjct: 626 IQQGR 630 >gi|41053461|ref|NP_956607.1| chromodomain-helicase-DNA-binding protein 1-like [Danio rerio] gi|82209540|sp|Q7ZU90|CHD1L_DANRE RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like gi|29791985|gb|AAH50498.1| Chromodomain helicase DNA binding protein 1-like [Danio rerio] Length = 1026 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 25/217 (11%), Positives = 69/217 (31%), Gaps = 25/217 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 + Y + + + ++ + + + E Sbjct: 277 RYYKAILMRDLDAFRTDQSTKTRLLNVLMQLRKCVDHPYLFDGVEPEPFEMGEHLVEASG 336 Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ +++ L LQ ++ I+ Sbjct: 337 KLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIK 396 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + + + G G+NL + ++F ++ + + R + G Sbjct: 397 NFSTKDVFIFLLSTKAGGVGMNLTA-ADTVIFVDGDFNPQN-----DLQAAARAHRIGQT 450 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R V V L+ ++TI+E++ R +K + D ++ + Sbjct: 451 RPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTVIEEGR 487 >gi|328861599|gb|EGG10702.1| hypothetical protein MELLADRAFT_22404 [Melampsora larici-populina 98AG31] Length = 1154 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 78/222 (35%), Gaps = 31/222 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 M Y + Y L + + ++ + +N + + + Sbjct: 405 MYWYKAILTKNYA-LLASTDSQVSLLNVAMELKKASNHPFLFPGAEPKTDTKETTLKGLV 463 Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 V+ K+ L+ ++ KA +++ L + ++ Sbjct: 464 VNSGKMILLDKLLTRLKAEGHRVLIFSQMVRMLDIMSDYMSLRGYIFQRLDGTVASEERR 523 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N P + G G+NL + ++ F W+ + + + R Sbjct: 524 KAIGHFNAPDSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDWNPQN-----DLQAMARA 577 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V VY L+ ++T++E VL+R + K ++ ++N + Sbjct: 578 HRIGQKNHVNVYRLVTKDTVEEDVLERAKRKMILEYAIINQM 619 >gi|145255017|ref|XP_001398836.1| TBP associated factor (Mot1) [Aspergillus niger CBS 513.88] gi|134084423|emb|CAK97415.1| unnamed protein product [Aspergillus niger] Length = 1895 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 73/243 (30%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIE-AFNSASKTVKCLQLANGAVYYDEEKHWKE------------- 50 K Q+EL L + +L N +E H + Sbjct: 1576 KKEQKELANKLGSSEKSDKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQQYLTTKQSH 1635 Query: 51 ----VHDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLAR---- 83 H K+ AL ++ + +V L Sbjct: 1636 IRDVSHAPKLSALRDLLLDCGIGVDPPTEGDLGTGASYVSPHRALVFCQMKEMLDIVQSE 1695 Query: 84 ---------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 G K + +N + +L + G GLNL G + ++ Sbjct: 1696 VLRKLLPSVQYLRLDGGVEATKRQDIVNRFNSDPSYDVLLLTTSVGGLGLNLT-GADTVI 1754 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1755 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1809 Query: 194 LLN 196 ++N Sbjct: 1810 VVN 1812 >gi|330930041|ref|XP_003302867.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1] gi|311321495|gb|EFQ89043.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1] Length = 812 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 64/212 (30%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N E K W + + Sbjct: 511 LKVIGMLKKLCNHPDLLNLPEDLPGCENTLPDDFVQKDARGRDREVKTWYSGKMAVLDRM 570 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I I++ ++ L + K + ++N+ + Sbjct: 571 LARIRAETNDKIVLISNYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLVDKFNDPES 630 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 631 PEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 684 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y I TI+E V QR K ++ ++++ + Sbjct: 685 YRFITTGTIEEKVFQRQSHKQSLSSCVVDSAE 716 >gi|189211141|ref|XP_001941901.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977994|gb|EDU44620.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 812 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 64/212 (30%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N E K W + + Sbjct: 511 LKVIGMLKKLCNHPDLLNLPEDLPGCENTLPDDFVQKDARGRDREVKTWYSGKMAVLDRM 570 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I I++ ++ L + K + ++N+ + Sbjct: 571 LARIRAETNDKIVLISNYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLVDKFNDPES 630 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 631 PEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 684 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y I TI+E V QR K ++ ++++ + Sbjct: 685 YRFITTGTIEEKVFQRQSHKQSLSSCVVDSAE 716 >gi|114558326|ref|XP_001158033.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform 8 [Pan troglodytes] Length = 896 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 + Y + + E + + + + + + E Sbjct: 288 RYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASG 347 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 348 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 407 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + I + + G G+NL + ++F ++ + + R + G Sbjct: 408 NFGRQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 461 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 462 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|189240851|ref|XP_001812556.1| PREDICTED: similar to chromodomain helicase-DNA-binding protein 3 [Tribolium castaneum] Length = 1966 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 65/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 K Y + L ++ + + + + N + + Sbjct: 978 KYYKYILTRNFEALNPKGGGQSVSLLNIMMDLKKCCNHPYLFPVAAEEAPIGPTGGYDIQ 1037 Query: 53 -----DEKIK--ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ A + I + +++ L L+ + Sbjct: 1038 SLIKASGKLVLLAKMLRILREQGHRVLIFSQMTKMLDILEDFLEGEGYKYERIDGAITGS 1097 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + + G G+NL + ++ + W+ + Sbjct: 1098 SRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1151 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1152 SRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1193 >gi|70950861|ref|XP_744718.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56524786|emb|CAH76731.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 1330 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 77/222 (34%), Gaps = 27/222 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEV------HD 53 ++ Y + Y L + A NS ++ ++ N E E Sbjct: 803 IEYYKNILTKNYEQLAKASGGAKNSLQNICMELKKVCNHPFLCCEPIDKDEYRERLVYSS 862 Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTI 101 KI LE ++ + +++ L + T + + Sbjct: 863 GKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRGFKHQRLDGTMTKEMRKKAM 922 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G G+NL + ++ + W+ + + R + Sbjct: 923 NHFNSKNSDDFVFLLSTKAGGLGINLTS-ADTVIIYDSDWNPQN-----DLQAGARAHRI 976 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V +Y L+ +++I++ +L+R + K + L++ L K+ Sbjct: 977 GQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKK 1018 >gi|194036340|ref|XP_001928553.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Sus scrofa] Length = 901 Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 25/217 (11%), Positives = 73/217 (33%), Gaps = 25/217 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 290 KYYKAILMKDLDAFENEMAKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASG 349 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 350 KLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 409 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 410 NFGQQPIFIFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 463 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++V V LI ++T++E++ ++ +K + + ++ + Sbjct: 464 KSVKVIRLIGRDTVEEIICRKAASKLKLTNTIIEGGR 500 >gi|170089013|ref|XP_001875729.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164648989|gb|EDR13231.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1011 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 80/229 (34%), Gaps = 41/229 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-------------ASKTVKCLQLANGAVYY--------DE 44 + QR+ Y + ++I+A N + ++ ++ + Sbjct: 372 EMQRKWYRSVLEKDIDAVNGGCLTGKKEGKTRLMNMVMQLRKVTCHPYLFDGAEPGPPYT 431 Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQGR 92 + K+ L+ ++ KA + +++ + G Sbjct: 432 TDEHLIQNSGKMVILDKLLANMKAKGSRVLIFSQMSRVLDILEDYCLFRQYKYCRIDGGT 491 Query: 93 TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I E+N+ + + G G+NL +I+V + W+ + + Sbjct: 492 AHEDRIAAIDEYNKPGSERFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DL 545 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G + V+V+ I + +++E +L+R K + L++ + Sbjct: 546 QAMDRAHRIGQTKQVYVFRFITEGSVEERMLERAAQKLRLDQLVIQQGR 594 >gi|289619716|emb|CBI53999.1| unnamed protein product [Sordaria macrospora] Length = 861 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 28/213 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVH------DEKI 56 + +R DL + I + ++ + N Y + + K+ Sbjct: 562 EEIERAQTLDLAKKEISNKKLGNPLLQLRLVCNSPHNFYNPWSNSNQPIDESIVTASGKM 621 Query: 57 KALEVIIEK--ANAAPIIVAYHFN------SDLARLQKAFPQGRTL------DKDPCTIQ 102 L+ ++ +++ F D R +++ R D+ Q Sbjct: 622 LLLDRLLPALFERGHKVLIFSQFKTQLDILEDYCRELRSWDICRIDGGVAQDDRRAQIEQ 681 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + + G G+NL + ++ F W+ ++ + R + G Sbjct: 682 FNTDPAVKIFLLSTRAGGQGINL-ASADTVILFDSDWNPQQ-----DLQAQDRCHRIGQT 735 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V VY L + T++E +L K ++ L++ Sbjct: 736 RPVVVYRLATKGTVEEELLMSADAKRRLEKLVI 768 >gi|74008347|ref|XP_865278.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a isoform 2 [Canis familiaris] Length = 1070 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKVYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVELLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LNALK 199 + + Sbjct: 647 IQQGR 651 >gi|50553882|ref|XP_504352.1| YALI0E24431p [Yarrowia lipolytica] gi|49650221|emb|CAG79951.1| YALI0E24431p [Yarrowia lipolytica] Length = 940 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 37/227 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HDEK 55 + Y K E L+ +++F S + ++ N + E+ + + K Sbjct: 587 EIYTKLSSEYLNRLERHQVDSFKS---ILSLRKVCNSPILLSEDGPALDSGKAYLRNSGK 643 Query: 56 IKALEVIIEK---------ANAAPIIVAYHFNS----------DLARLQKAFPQGRTLDK 96 + L +I + NA +++ F DL Sbjct: 644 MNTLFRMIGQLRARNKMDPDNAEKVVIVSSFTQTLDVIEGLVKDLKLSFTRLDGSVQASA 703 Query: 97 DPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++++N + + G G+NL G + L F W+ ++ + Sbjct: 704 RAKIVKQFNSSSADSCFVFLLSARAGGVGINL-IGASRLFLFDPDWNPA-----VDLQAM 757 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G K+ V++Y L+ IDE + QR K+ + + L+ ++ Sbjct: 758 ARIHRDGQKKPVYIYRLLTTGCIDEKIFQRQTIKTGLANSLIEGTEE 804 >gi|303284137|ref|XP_003061359.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226456689|gb|EEH53989.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 2006 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 77/253 (30%), Gaps = 64/253 (25%) Query: 2 KQYHKFQRELYCDLQGENIE-------------AFNSASKTVKCLQLANGAVYYDEEKHW 48 K Y F+ + + +L + + K Sbjct: 1672 KLYDAFEGSSVKSEIETAVSGGGGGADGDGAGATSHVFQALQYLRKLCSHPRLVNGGKKA 1731 Query: 49 KEVH------DEKIKALEVII-------------------------EKANAAPIIVAYH- 76 K AL+ I+ +++ +++ Sbjct: 1732 VGGKVSAEDASPKFVALKQILLDAGIGRDPDVEREDQETGGFAKKESESSGHRVLIFTQL 1791 Query: 77 -----------FNSDLARLQKAFPQGR-TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGL 123 F + + + G + ++++N + I +L G GL Sbjct: 1792 KGLLDLVEEELFGTMMRGVSWLRLDGSVPPTRRFDVVRKFNADPSIDVLLLTTHVGGLGL 1851 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + +VF W+ ++ + + R + G K+ V VY L+ + T++E ++ Sbjct: 1852 NLTS-ADTVVFLEHDWNPQK-----DLQAMDRAHRLGQKKTVNVYRLLTKGTMEEKIMGL 1905 Query: 184 LRTKSTIQDLLLN 196 R K + + ++N Sbjct: 1906 QRFKLDVANAVVN 1918 >gi|224044097|ref|XP_002190618.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 1168 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 73/259 (28%), Gaps = 71/259 (27%) Query: 8 QRELYC--DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----------- 54 ++E + + S ++ Q ++ E Sbjct: 902 RKEFLAGSQSASQVSSTVHVLSMLLRLRQCCCHLSLLKMALDQVNLNSEGLALSIEEQLG 961 Query: 55 ---------------------------------------KIKALEVIIEKANAAPIIVAY 75 + L+ I +V Sbjct: 962 ALTLSELQTPDSESTVYLNGTAFKTDIFDITRESTKVAQLLAELKTIQSHPEPQKSVVVS 1021 Query: 76 HFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGL 123 + S L + + + ++E+N ++ + G GL Sbjct: 1022 QWTSMLKVVAVHLQRLGLKCATVDGSVNPKQRMDVVEEFNNNPKGPQVMLVSLLAGGVGL 1081 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL GGN L + W+ Q +RI + G K+ V ++ + + T++E +LQ Sbjct: 1082 NLT-GGNHLFLLDMHWNPALEDQACDRI-----YRVGQKKDVVIHRFVCEGTVEENILQL 1135 Query: 184 LRTKSTIQDLLLNALKKET 202 + K + +L+ K ET Sbjct: 1136 QKRKKGLAQQILSG-KGET 1153 >gi|213402301|ref|XP_002171923.1| TATA-binding protein-associated factor MOT1 [Schizosaccharomyces japonicus yFS275] gi|211999970|gb|EEB05630.1| TATA-binding protein-associated factor MOT1 [Schizosaccharomyces japonicus yFS275] Length = 1915 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 70/232 (30%), Gaps = 58/232 (25%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKH-----------------WKEVHDEKIKAL 59 G+ + +L N +KH H K+ AL Sbjct: 1619 GKVKGKTHIFQALQYMRKLCNHPALILTKKHPESAAIEARLQKENSSIHDFKHAPKLTAL 1678 Query: 60 EVIIEKAN---------------------AAPIIVAYHFNSDLARLQKAF---------- 88 ++ + N +++ L ++ Sbjct: 1679 RQLLLECNIGTENDSALGANGGTVGSAVSEHRVLIFCQLKDMLDIVENDVLRKTMPSVTY 1738 Query: 89 ---PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +K + +N + I +L G GLNL G + ++F W+ Sbjct: 1739 LRLDGSVDPNKRQEVVTRFNSDPSIDVLLLTTHVGGLGLNLT-GADTVIFVEHDWNPMR- 1796 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ V VY LI + T++E ++ + K + ++N Sbjct: 1797 ----DLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMGLQQFKLNVASTIVN 1844 >gi|238898768|ref|YP_002924450.1| phage DNA helicase, partial [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466528|gb|ACQ68302.1| phage DNA helicase, partial [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 157 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 66/144 (45%), Positives = 92/144 (63%), Gaps = 5/144 (3%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 +E +I++A P++VAY++ SDLA ++ FP+ + TI WN GKIPLL AHPAS Sbjct: 1 MEEMIQEAAGQPVLVAYNYQSDLALIKVRFPKAELIGHAADTIDRWNTGKIPLLLAHPAS 60 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GHGLNLQ GGNI+V+F L W LE +QQ R+ + G R VF+++L+ ++ID Sbjct: 61 AGHGLNLQSGGNIIVWFGLNWSLELYQQFNARL-----HRQGQTRPVFIHHLVMNDSIDL 115 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 VL+ L K Q LL+ALKK+ Sbjct: 116 TVLEALENKHITQKALLDALKKDI 139 >gi|67523645|ref|XP_659882.1| hypothetical protein AN2278.2 [Aspergillus nidulans FGSC A4] gi|40745233|gb|EAA64389.1| hypothetical protein AN2278.2 [Aspergillus nidulans FGSC A4] gi|259487671|tpe|CBF86520.1| TPA: catalytic subunit of the SWI/SNF chromatin remodeling complex (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1407 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 75/215 (34%), Gaps = 30/215 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----------KIKA 58 + + D +G + ++ ++ +L N +++ + K + Sbjct: 801 KMVVSDGKGGKVGMRGLSNMLMQLRKLCNHPFVFEQVEDQVNPGRGTNDLIWRTAGKFEL 860 Query: 59 LEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNE 106 L+ I+ K +++ + + ++ D ++ +N Sbjct: 861 LDRILPKFKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNA 920 Query: 107 GKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + G GLNLQ + ++ F W+ + + R + G K Sbjct: 921 PDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQ-----DLQAQDRAHRIGQKNE 974 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V + LI N+++E +L+R + K + ++ A K Sbjct: 975 VRILRLITSNSVEEKILERAQFKLDMDGKVIQAGK 1009 >gi|212532137|ref|XP_002146225.1| SNF2 family helicase/ATPase PasG, putative [Penicillium marneffei ATCC 18224] gi|210071589|gb|EEA25678.1| SNF2 family helicase/ATPase PasG, putative [Penicillium marneffei ATCC 18224] Length = 916 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 79/221 (35%), Gaps = 28/221 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVH------DEKI 56 + +R L + I + + ++ N Y+ V K+ Sbjct: 617 EEIERAKTIKLAKKEIGSKKLQNPIMQARLACNSPHNFYWPWGDDSSTVDETLITASGKM 676 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE 103 L+ ++ I++ F + L +Q Q G + I+ Sbjct: 677 LLLDRLVPCLMKKGHKILIFSQFKTQLDLIQDWATQLRGWNCCRIDGGVSQVDRRAQIKA 736 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + G G+NL + ++ F W+ ++ + R + G Sbjct: 737 FNSNKNFKIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQT 790 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 791 RPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFKSL 831 >gi|73946655|ref|XP_860536.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 25 [Canis familiaris] Length = 1548 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 74/223 (33%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGEN----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y Q + G + A + ++ ++ N + + V Sbjct: 961 LYRHMQAKGILLTDGSEKDKKVRAKTLMNTIMQLRKICNHPYMFQHIEVKPTVGDECMAE 1020 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K A +++ S + ++ F + Sbjct: 1021 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1080 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++++NE + + G GLNLQ + +V F W+ + + Sbjct: 1081 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQAQD 1134 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1135 RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1177 >gi|114558336|ref|XP_001157822.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform 4 [Pan troglodytes] Length = 692 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 + Y + + E + + + + + + E Sbjct: 84 RYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASG 143 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 144 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 203 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + I + + G G+NL + ++F ++ + + R + G Sbjct: 204 NFGRQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 257 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 258 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 292 >gi|270013510|gb|EFA09958.1| hypothetical protein TcasGA2_TC012115 [Tribolium castaneum] Length = 1969 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 65/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 K Y + L ++ + + + + N + + Sbjct: 981 KYYKYILTRNFEALNPKGGGQSVSLLNIMMDLKKCCNHPYLFPVAAEEAPIGPTGGYDIQ 1040 Query: 53 -----DEKIK--ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ A + I + +++ L L+ + Sbjct: 1041 SLIKASGKLVLLAKMLRILREQGHRVLIFSQMTKMLDILEDFLEGEGYKYERIDGAITGS 1100 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + + G G+NL + ++ + W+ + Sbjct: 1101 SRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1154 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1155 SRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1196 >gi|149024737|gb|EDL81234.1| rCG30890, isoform CRA_a [Rattus norvegicus] Length = 1668 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 684 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGS 743 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 744 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 803 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 804 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 857 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 858 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 899 >gi|324507205|gb|ADY43057.1| DNA repair and recombination protein RAD54-like protein [Ascaris suum] Length = 755 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 77/236 (32%), Gaps = 47/236 (19%) Query: 2 KQYHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYYDE------------- 44 K Y K I + S +L N + Sbjct: 432 KLYQKLISSKRLKEDTSRSDGKITG-TALSFITNLKKLCNHPQLVYDKCQKNEEGFQGCL 490 Query: 45 --------EKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAF----- 88 +K ++ K+K L+ ++ ++ ++ ++ + + Sbjct: 491 ELFPSGFSDKTFEPAFSGKMKVLDYLLAVTKQTTNDKFVLVSNYTQTIDSFVELCKLRRY 550 Query: 89 -----PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 ++ + ++++N+ + + G GLNL G N LV F W+ Sbjct: 551 GYVRLDGSSSIKQRAKIVEKFNDPTSSEYVFLLSSKAGGCGLNL-IGANRLVMFDPDWNP 609 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ F+Y L+A TI+E + QR K + +++ Sbjct: 610 AN-----DDQAMARIWRDGQKKHCFIYRLLATGTIEEKMFQRQTHKKALSSCVVDE 660 >gi|281212152|gb|EFA86312.1| hypothetical protein PPL_00102 [Polysphondylium pallidum PN500] Length = 2033 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 81/220 (36%), Gaps = 30/220 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-SASKTVK-----CLQLANGAVYYDEEKHWKEVHDEK 55 K Y+ + + + E N +K +K ++ N + ++++ + + + Sbjct: 1280 KMYNLIRTKGVSKFTAGSGEDGNPKLAKGLKNTLVQLRKICNHPYLFYDDEYAIDDYMIR 1339 Query: 56 IKALEVIIEKA------NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 +++K + +++ + L++ F D+ Sbjct: 1340 CAGKFDLLDKILPKLKASGHRVLIFSQMTHLIDILEQFFYYKGYKYLRLDGSTKSDERGP 1399 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + + G GLNLQ + ++ F W+ + ++ R Sbjct: 1400 LLNLFNAENSEYFIFVLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDLQAQDRAH 1453 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V V L+ N+++E ++ R K + ++ A Sbjct: 1454 RIGQKQTVKVLRLVTANSVEERIIARANFKKELDRKIIQA 1493 >gi|255729544|ref|XP_002549697.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis MYA-3404] gi|240132766|gb|EER32323.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis MYA-3404] Length = 1024 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 81/226 (35%), Gaps = 39/226 (17%) Query: 7 FQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYYDEEK--------H 47 Q+ LY + ++I+A N + ++ + N ++ + Sbjct: 374 MQKNLYKKILEKDIDAVNGSNGKKESKTRLLNIVMQLRKCCNHPYLFEGMEPGPPYTTDE 433 Query: 48 WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LD 95 + +K+ L+ ++ + + +++ + L L+ Sbjct: 434 HLVFNSQKMLILDQMLKKFQQEGSRVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTEHS 493 Query: 96 KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I E+N+ + + G G+NL +I++ F W+ + + + Sbjct: 494 DRINAIDEYNKPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQA-----DLQAM 547 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V V+ I +N I+E VL+R K + L++ + Sbjct: 548 DRAHRIGQTKQVKVFRFITENAIEEKVLERATQKLRLDQLVIQQGR 593 >gi|67527878|ref|XP_661791.1| hypothetical protein AN4187.2 [Aspergillus nidulans FGSC A4] gi|40740096|gb|EAA59286.1| hypothetical protein AN4187.2 [Aspergillus nidulans FGSC A4] gi|259481212|tpe|CBF74527.1| TPA: TBP associated factor (Mot1), putative (AFU_orthologue; AFUA_1G05830) [Aspergillus nidulans FGSC A4] Length = 1904 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 78/249 (31%), Gaps = 60/249 (24%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKE------ 50 K + F ++ LQ + + +L N +E H + Sbjct: 1579 KLFEDFTKKEQKALQEKMGSSEKADKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQQY 1638 Query: 51 -----------VHDEKIKALEVIIEKA------------------NAAPIIVAYHFNSDL 81 H K+ AL+ ++ + +V L Sbjct: 1639 LQEKKSYLRDVSHAPKLSALKDLLLDCGIGVEPTEGNLGAGASYVSPHRALVFCQMKEML 1698 Query: 82 ARLQKAFPQ-------------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 +Q Q + + +N + +L + G GLNL Sbjct: 1699 DIVQSEVLQKLLPSVQFLRLDGAVEATRRQDIVNRFNSDPSYDVLLLTTSVGGLGLNLT- 1757 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R K Sbjct: 1758 GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1812 Query: 188 STIQDLLLN 196 + ++N Sbjct: 1813 IDVASTVVN 1821 >gi|289620805|emb|CBI52539.1| putative RAD54 protein [Sordaria macrospora] Length = 824 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + + Sbjct: 513 LKAINMLKKLCNHPDLLDLSADLPGCEQYWPDDYVPKEARGRDRDVKPWYSGKMQVLDRM 572 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I I++ ++ L ++ ++K + ++N+ + Sbjct: 573 LARIRADTNDKIVLISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFNDPEG 632 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 633 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 686 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 687 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 718 >gi|296412613|ref|XP_002836017.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629817|emb|CAZ80174.1| unnamed protein product [Tuber melanosporum] Length = 591 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 69/212 (32%), Gaps = 26/212 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKALEV 61 + E + I ++ ++ N + E K+ LE Sbjct: 291 EDEKLILQATQEIGTKKLQNRIMQLRLACNSPHLFYWPWGQGEPDERLVTVSGKMMLLER 350 Query: 62 IIEK--ANAAPIIVAYHFNSDL-----------ARLQKAFPQGRTLDKDPCTIQEWN-EG 107 ++ A +++ F L G + I+ +N + Sbjct: 351 LVPALFARGHKVLIFSQFTKMLDIIEEWAVTLRHWPVCRIDGGIKQEDRREHIRRFNKDE 410 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL + ++ F W+ ++ + R + G K+ V + Sbjct: 411 GWNIFLLSTRAGGLGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQKKPVII 464 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y T+++ +L++ K ++ L++ K Sbjct: 465 YRFATAATVEQTILEKADGKRRLEKLVIQKGK 496 >gi|219112733|ref|XP_002178118.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411003|gb|EEC50932.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 995 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 84/218 (38%), Gaps = 28/218 (12%) Query: 2 KQYHKFQRELYCD--LQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEV----HD 53 + Y + ++ D L G + +A + + ++ ++ N + E + Sbjct: 504 ELYKQISKKAVADTALMGTDTQAPSRGLNNIVMQLRKVCNHPYLFSPEGYHINDIIVRSS 563 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTI 101 K+ L+ ++ K A +++ + + ++ F ++ + Sbjct: 564 GKMALLDQMLPKLRAAGHRVLMFTQMTAVMTIMEDYFALRGYKSLRLDGSTPAEEREKRM 623 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++N P + + G GLNL + ++ F W+ M++ R + Sbjct: 624 YKFNAPDSPYFVFLLSTRAGGLGLNLTS-ADTVIIFDSDWNP-----MMDLQAQDRAHRI 677 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V+ LI + ++E +L R K ++ +L++ + Sbjct: 678 GQRSDVSVFRLITYSPVEEKILSRANEKLSVSELVVES 715 >gi|301788384|ref|XP_002929608.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Ailuropoda melanoleuca] Length = 886 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 25/214 (11%), Positives = 72/214 (33%), Gaps = 25/214 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 278 KYYKAILMKDLDAFENEMAKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASG 337 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 338 KLYLLDKLLAFLYSRGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 397 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + + + G G+NL + ++F ++ + + R + G Sbjct: 398 NFGQQPVFIFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 451 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++V V LI ++T++E+V ++ +K + + ++ Sbjct: 452 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIE 485 >gi|237841199|ref|XP_002369897.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] gi|211967561|gb|EEB02757.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] Length = 1606 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 80/213 (37%), Gaps = 24/213 (11%) Query: 3 QYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---HDEKIKA 58 Y + Q + + ++ + ++ ++AN + +E E K + Sbjct: 953 VYKQIQEKGLRTVDQVGHVTKRGFQNTLMQLRKIANHPYLFVDEYLVNEDLVRVAGKFEC 1012 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNE 106 L+ ++ K +++ L + + + ++E+N Sbjct: 1013 LDRMLPKLLHFKHKVLIFSQMTQVLDLMAEYMHLRGYKYARLDGSVGLTERKERMEEFNN 1072 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++ + + G GLNLQ + +V F ++ + + + R + G + Sbjct: 1073 AEVDTMIFMLSTRAGGLGLNLQA-ADTVVLFDSDFNPHQ-----DLQAMCRAHRLGQTKQ 1126 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L+ + ++E++L++ K I +++ A Sbjct: 1127 VKVFRLVTISGVEEIILEKANRKLNIDQMVIQA 1159 >gi|114558330|ref|XP_001157925.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform 6 [Pan troglodytes] Length = 791 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 + Y + + E + + + + + + E Sbjct: 288 RYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASG 347 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 348 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 407 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + I + + G G+NL + ++F ++ + + R + G Sbjct: 408 NFGRQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 461 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 462 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|326669481|ref|XP_001922536.3| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Danio rerio] Length = 2485 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 76/240 (31%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDE-----EKHWKEVHD- 53 K Y + + L N + ++ + N + +KEV+ Sbjct: 705 KYYRAILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYLIKGAEEKIMEDFKEVYSP 764 Query: 54 --------------EKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ Q R L + Sbjct: 765 AAVDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 824 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 825 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 881 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY LI +N+ + + R K + +L ++ + Sbjct: 882 ---DLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSL 938 >gi|226289865|gb|EEH45349.1| ISWI chromatin-remodeling complex ATPase ISW1 [Paracoccidioides brasiliensis Pb18] Length = 1146 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 446 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 505 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKD 97 + K+ L+ I+ K + +++ + L + Sbjct: 506 IDNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQYCRIDGSTAHEDR 565 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ + W+ + + + R Sbjct: 566 IAAIDEYNRPGSEKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 619 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 620 AHRIGQTKQVVVFRFVTENAIEEKVLKRAAQKLRLDQLVIQQGRAQ 665 >gi|326426828|gb|EGD72398.1| chromodomain helicase DNA binding protein 1 [Salpingoeca sp. ATCC 50818] Length = 1534 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 76/224 (33%), Gaps = 33/224 (14%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD------------EEKHW 48 + Y + Y L+ + + + + ++ + N A D E Sbjct: 831 QIYKHIITKNYTALRSLKKGQKSSLVNVIMELKKCCNHASLIDQAPLSNPDVSPTENMRN 890 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K+ L+ ++++ + +++ L L ++ Sbjct: 891 LLKGSGKLILLDKLLQRLHDKGHRVLIFSQMVLMLDVLATYLMMKGYPFQRLDGNIPNER 950 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + G G+NL + ++ F W+ + + Sbjct: 951 RKQAIDHFNAPGSADFCFILSTRAGGLGVNL-ATADTVIIFDSDWNPQN-----DLQAQA 1004 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G R V +Y +++NT++E +L+R + K + L++ + Sbjct: 1005 RAHRIGQTRQVNIYRFVSKNTVEEDILERAKKKMVLDHLVIQRM 1048 >gi|296201335|ref|XP_002806848.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 3-like, partial [Callithrix jacchus] Length = 1916 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 984 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1043 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1044 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1103 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1104 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1157 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1158 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1199 >gi|239610005|gb|EEQ86992.1| SNF2 family helicase/ATPase PasG [Ajellomyces dermatitidis ER-3] Length = 862 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 75/220 (34%), Gaps = 28/220 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------DEKIK 57 K ++ L + I + + ++ N + H K+ Sbjct: 559 KIEKTKTAQLAKKEIASKKLQNPVMQARLACNSPHNFYWPWDDDPSHIDESLITSSGKML 618 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEW 104 L+ +I + I++ F + L + IQ + Sbjct: 619 LLDRLIPCLMSKGHKILIFSQFKTQLDLLQDYATYLRGWNCCRIDGAVSQVDRQAQIQAF 678 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N + + G G+NL + ++ F W+ ++ + R + G + Sbjct: 679 NTNQDYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTK 732 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 733 PVIVYRLATRGTVEQTLLEKADSKRRLEKLVIQKGKFKSL 772 >gi|57208178|emb|CAI42684.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] gi|57208839|emb|CAI42614.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] Length = 1005 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 392 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 451 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 452 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 511 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 512 DGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 570 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 571 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 625 Query: 195 LNALK 199 + + Sbjct: 626 IQQGR 630 >gi|153807263|ref|ZP_01959931.1| hypothetical protein BACCAC_01541 [Bacteroides caccae ATCC 43185] gi|149130383|gb|EDM21593.1| hypothetical protein BACCAC_01541 [Bacteroides caccae ATCC 43185] Length = 948 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 21/207 (10%) Query: 3 QYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + + L L +F+ + ++ QLA + + +I Sbjct: 730 LYEQEKNSLRNILLQHPQNMDKLHSFSILNGILRLRQLACHPQLIYPDFNGASGKAIQII 789 Query: 58 ALEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + + ++ +++ F L + A G T ++ + Sbjct: 790 EIFDTL-RSEGHKVLIFSSFVKHLEVLAEAFRERGWKYALLTGATNNRPSEIAHFTEQKD 848 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL + + WW+ E + R + G + V Y Sbjct: 849 VQAFLISLKAGGVGLNLTQ-ADYVFIIDPWWNPAA-----ESQAIARAHRIGQDKQVIAY 902 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 I QN+I+E +L K + + + Sbjct: 903 RFITQNSIEEKILYLQDEKRKLAETFV 929 >gi|71004464|ref|XP_756898.1| hypothetical protein UM00751.1 [Ustilago maydis 521] gi|74704380|sp|Q4PGL2|INO80_USTMA RecName: Full=Putative DNA helicase INO80 gi|46095890|gb|EAK81123.1| hypothetical protein UM00751.1 [Ustilago maydis 521] Length = 1910 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 66/159 (41%), Gaps = 19/159 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKD 97 V K+ L+V++ + AN +++ + + +++ + D+ Sbjct: 1576 VDSSKLAKLDVLLRELKANGHRVLIYFQMTRMIDLMEEYLIYRQYKYLRLDGASKISDRR 1635 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ + + G G+NL + ++F+ W+ + + R Sbjct: 1636 DMVTDWQTKPELFIFLLSTRAGGLGINLTA-ADTVIFYDHDWNPSN-----DSQAMDRAH 1689 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY LI + TIDE +++ R K +QD+++ Sbjct: 1690 RLGQTKQVTVYRLITKGTIDERIVRLARNKKEVQDIVVG 1728 >gi|226290524|gb|EEH46008.1| helicase [Paracoccidioides brasiliensis Pb18] Length = 857 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 74/220 (33%), Gaps = 28/220 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------KHWKEVHDEKIK 57 + +R L + I + + ++ N + K+ Sbjct: 552 RIERAKTAQLAKKEIASKKLQNPVMQARLACNSPHNFYWPWDDDPSSVDSSLITSSGKML 611 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEW 104 ++ +I + I++ F + L + I + Sbjct: 612 LIDRLIPCLMSKNHKILIFSQFKTQLDILQDYAVYLRGWNCCRIDGAVSQADRQAQIAAF 671 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N + + + G G+NL + ++ F W+ ++ + R + G + Sbjct: 672 NTDPNYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTK 725 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 726 PVIVYRLATRGTVEQTLLEKADSKRKLEKLVIQKGKFKSL 765 >gi|302406532|ref|XP_003001102.1| TATA-binding protein-associated factor MOT1 [Verticillium albo-atrum VaMs.102] gi|261360360|gb|EEY22788.1| TATA-binding protein-associated factor MOT1 [Verticillium albo-atrum VaMs.102] Length = 1876 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 57/240 (23%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW---------------- 48 K Q E + + + +L N + H Sbjct: 1558 KKLQEEA---GKDDKEAKSHIFQALQYMRKLCNSPALVMKPGHNLYDDTQRLLNKQGTSL 1614 Query: 49 -KEVHDEKIKALEVIIEKA-----------------NAAPIIVAYHFNSDLARLQKAF-- 88 H K+ AL ++ +V L +Q Sbjct: 1615 EDPAHAPKLTALRDLLVDCGIGVEGAESNDPLYQPIKPHRALVFCQMKEMLDMVQNTVLK 1674 Query: 89 -----------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 G +K + ++N + +L + G GLNL G + ++F Sbjct: 1675 SMLPSVSFLRLDGGVEANKRQAIVNKFNQDPSYDVLLLTTSVGGLGLNLT-GADTVIFVE 1733 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ ++ + + R + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1734 HDWNPQK-----DLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKIDVASTVVN 1788 >gi|242793727|ref|XP_002482225.1| SNF2 family helicase/ATPase (Ino80), putative [Talaromyces stipitatus ATCC 10500] gi|218718813|gb|EED18233.1| SNF2 family helicase/ATPase (Ino80), putative [Talaromyces stipitatus ATCC 10500] Length = 1662 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1375 DSGKLAKLDELLRELKNGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1434 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1435 TVADFQHRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1488 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1489 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1527 >gi|320581998|gb|EFW96217.1| DNA-dependent ATPase [Pichia angusta DL-1] Length = 828 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 65/208 (31%), Gaps = 42/208 (20%) Query: 26 ASKTVKCLQLANGAVYYD------------------------EEKHWKEVHDEKIKALEV 61 +L D + + W ++ Sbjct: 537 LKAIGLLRKLCTHPRLLDLPNDISGSENILPDDYDFGNGRNKDVQTWYSGKFAMLERFLF 596 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGKIP- 110 I K I++ +F L ++K R ++K + +N+ Sbjct: 597 KIRKETDDKIVLISNFTQTLDLIEKLCRHHRFGTVRLDGSLGINKRQKLVDRFNDPNADE 656 Query: 111 -LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G+NL G N L+ W+ Q + R + G K+ F+Y Sbjct: 657 FVFLLSSKAGGCGINL-IGANRLILLDPDWNPASDQ-----QALARVWRDGQKKNCFIYR 710 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 IA TI+E + QR K + ++++ Sbjct: 711 FIATGTIEEKIFQRQSAKMELSTCVVDS 738 >gi|221483589|gb|EEE21901.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii GT1] Length = 1628 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 80/213 (37%), Gaps = 24/213 (11%) Query: 3 QYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---HDEKIKA 58 Y + Q + + ++ + ++ ++AN + +E E K + Sbjct: 953 VYKQIQEKGLRTVDQVGHVTKRGFQNTLMQLRKIANHPYLFVDEYLVNEDLVRVAGKFEC 1012 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNE 106 L+ ++ K +++ L + + + ++E+N Sbjct: 1013 LDRMLPKLLHFKHKVLIFSQMTQVLDLMAEYMHLRGYKYARLDGSVGLTERKERMEEFNN 1072 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++ + + G GLNLQ + +V F ++ + + + R + G + Sbjct: 1073 AEVDTMIFMLSTRAGGLGLNLQA-ADTVVLFDSDFNPHQ-----DLQAMCRAHRLGQTKQ 1126 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L+ + ++E++L++ K I +++ A Sbjct: 1127 VKVFRLVTISGVEEIILEKANRKLNIDQMVIQA 1159 >gi|327259622|ref|XP_003214635.1| PREDICTED: putative DNA helicase INO80 complex homolog 1-like [Anolis carolinensis] Length = 1421 Score = 98.3 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 69/171 (40%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ------- 90 +K K+ AL+V++ K+ +++ + L++ Sbjct: 1091 FIRIPDKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMR 1150 Query: 91 ----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1151 LDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT---- 1205 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1206 -VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1255 Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 12/134 (8%), Positives = 35/134 (26%), Gaps = 3/134 (2%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVII 63 + Q + + ++ ++ N ++ ++ W H K + + Sbjct: 787 DDLLQSSMGTTQQAQNTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQISKFL 846 Query: 64 EKANAAPIIVAY--HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + + L ++L +E + + PA Sbjct: 847 YHHGQIRVYNHSRDRWLQFLLSPFAPDHIQQSLFHRKGNEKESCFSFLRFIDISPAEMAS 906 Query: 122 GLNLQYGGNILVFF 135 ++ + L F Sbjct: 907 LVHKGHLARWLALF 920 >gi|325089155|gb|EGC42465.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus H88] Length = 830 Score = 97.9 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + + W + + Sbjct: 532 LKAIGILKKLCNHPDLLNLGADLPGSEQILPDDYVPLESRGRDRDVRSWYSGKMMVLDRM 591 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L ++ + K + ++N+ Sbjct: 592 LARIRQDTNDKIVLISNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVDKFNDPNG 651 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 652 EEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 705 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 706 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 737 >gi|260809115|ref|XP_002599352.1| hypothetical protein BRAFLDRAFT_64295 [Branchiostoma floridae] gi|229284629|gb|EEN55364.1| hypothetical protein BRAFLDRAFT_64295 [Branchiostoma floridae] Length = 996 Score = 97.9 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 73/234 (31%), Gaps = 46/234 (19%) Query: 1 MKQYHKFQRE------------LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW 48 ++ Y F + D + + + ++ N H Sbjct: 696 VQLYEDFAKSQARKGVEDSITMATADEEEKPKRTTHIFQALQYLQKVCNHPKLVLSCSHP 755 Query: 49 KEV-----------------HDEKIKALEVIIEKANAAPIIVAYHFNSDL---------A 82 + H K+ AL ++ + SDL Sbjct: 756 EFQQVALQLKAQQSSLDDIQHSAKLTALRQLLLDCG--IGVPDSGQTSDLLSDAVVGQHR 813 Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 L + + ++ N+ I LL G GLNL G + ++F W+ Sbjct: 814 ALVFCQLKSMLDILEKDLLKFNNDPSIDLLLLTTHVGGLGLNLT-GADTVIFVEHDWNPM 872 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ V VY L+ Q T++E ++ + K I + +++ Sbjct: 873 R-----DLQAMDRAHRLGQKKVVNVYRLVTQGTLEEKIMGLQKFKLNIANTVIS 921 >gi|162452831|ref|YP_001615198.1| hypothetical protein sce4555 [Sorangium cellulosum 'So ce 56'] gi|161163413|emb|CAN94718.1| hypothetical protein sce4555 [Sorangium cellulosum 'So ce 56'] Length = 1270 Score = 97.9 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 21/173 (12%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ--------- 85 + YD + K+ ++E+ A +V F S LA ++ Sbjct: 1064 SHPRLYD---ARSTLDSSKLARFLGLVEELCAEGQRALVFSQFTSHLALVREALEARGVA 1120 Query: 86 KAFPQGRTLDK-DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + G T K ++E+ EG PL + G G+NL ++ WW+ Sbjct: 1121 YVYLDGETPRKARAERVREFQEGSAPLFLISLKAGGFGINLTA-ATNVIHLDPWWNPA-- 1177 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E R + G +R V +Y L+A TI+E +L K ++ +L Sbjct: 1178 ---VEDQASDRAHRLGQRRPVTIYRLVALGTIEEKMLSLHAEKRSLVAQVLGG 1227 >gi|119592220|gb|EAW71814.1| FLJ20105 protein, isoform CRA_b [Homo sapiens] Length = 1080 Score = 97.9 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 64/222 (28%), Gaps = 32/222 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 + Y KF ++ +E + ++ +L + + + Sbjct: 230 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARAYVDHIDQVTDDTLME 287 Query: 53 -DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDP 98 K+ L ++++ +V L +++ L + Sbjct: 288 ESGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLERE 347 Query: 99 CTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + G GL L +V F W+ + V R Sbjct: 348 KRINLFQQNKDYSVFLLTTQVGGVGLTLTA-ATRVVIFDPSWNPAT-----DAQAVDRVY 401 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V VY LI T++E + +R K ++ K Sbjct: 402 RIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKK 443 >gi|198420785|ref|XP_002121862.1| PREDICTED: similar to DNA excision repair protein ERCC-6 (ATP-dependent helicase ERCC6) (Cockayne syndrome protein CSB) [Ciona intestinalis] Length = 1155 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 29/227 (12%), Positives = 65/227 (28%), Gaps = 41/227 (18%) Query: 10 ELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 ++Y + +I ++ ++ N + Sbjct: 276 DVYKEYLDSDIVHSILCRRAKIFVGLIQLRKICNHPDLFTGGHKLMVGEATPGYGDSRRF 335 Query: 52 ----HDEKIKALEVII--EKANAAPIIVAYHFNSDL-----------ARLQKAFPQGRTL 94 K+ +E ++ K +++ L Q Sbjct: 336 GYWRRSGKMVVVESLLRIWKKQGKKVLLFTQSRKMLGILEDFVKSRSYCYLTMHGQTSVQ 395 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + P + + I + G G+NL G + +V + W+ + Sbjct: 396 ARQPLVKKFNEDPSIFVFILTTRVGGLGVNL-IGADRVVIYDPDWNPST-----DTQAQE 449 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V +Y L+ TI+E + R K + + +L K+ Sbjct: 450 RSWRIGQTKQVTIYRLVTSGTIEEKIYHRQIFKQFMTNRVLKDPKQR 496 >gi|73946637|ref|XP_860229.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 17 [Canis familiaris] Length = 1553 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 37/226 (16%) Query: 3 QYHKFQRELYCDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----- 53 Y Q + G + A + ++ ++ N + + Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGGAKTLMNTIMQLRKICNHPYMFQHIEDVLPPKSVAVLG 1022 Query: 54 --------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 K + L+ I+ K A +++ S + ++ F Sbjct: 1023 MYNLYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1082 Query: 94 LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++++NE + + G GLNLQ + +V F W+ + + Sbjct: 1083 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQ 1136 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 AQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1182 >gi|321468122|gb|EFX79109.1| hypothetical protein DAPPUDRAFT_319863 [Daphnia pulex] Length = 4355 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 70/233 (30%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + L A N + ++ + + + + Sbjct: 1949 KYYRGILERNFSFLTKGTTNANVPNLMNTMMELRKCCIHPYLLNGAEEQIQYEMKVSHTS 2008 Query: 52 -----------HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K+ ++ ++ K A+ +++ L L+ + + Sbjct: 2009 DPDLHHKALIQSSGKLVLVDKLLPKLKADGHRVLIFSQMVRCLDILEDYLIYRKYPYERL 2068 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I + + + + G G+NL + ++ + W+ + Sbjct: 2069 DGRIRGNMRQAAIDRYCKPDSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2124 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G K+ V +Y L+ +NT + + + K + +L ++ Sbjct: 2125 --DLQAQARCHRIGQKKMVKIYRLLTRNTYEREMFDKASLKLGLDKAVLQSMN 2175 >gi|326430023|gb|EGD75593.1| snf family helicase [Salpingoeca sp. ATCC 50818] Length = 3098 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQG------ 91 ++ + H K++ LE ++ + +++ L L++ Sbjct: 1615 ALVLPDRALIQYHCSKLQVLEKLLREKKAGGHRVLIFTQMAKMLDILEQFLAFHAFTYLR 1674 Query: 92 ----RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + +N + ++ S G G+NL G + +VF+ W+ Sbjct: 1675 LDGSTPVVRRQQMTERFNRDSRLFCFILSTRSGGLGVNLT-GADTVVFYDSDWNPT---- 1729 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ R + G R V +Y L+ T++E +L++ + K + D+ + Sbjct: 1730 -MDAQAQDRAHRLGQTRDVHIYRLVCAKTVEENILKKAQQKRQLGDIAIEG 1779 >gi|170034779|ref|XP_001845250.1| TATA-binding protein-associated factor 172 [Culex quinquefasciatus] gi|167876380|gb|EDS39763.1| TATA-binding protein-associated factor 172 [Culex quinquefasciatus] Length = 1899 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 82/251 (32%), Gaps = 56/251 (22%) Query: 2 KQYHKFQR--------ELYCDLQGENIEAFNSASKTVKCLQ-LANGAVYYDEEKHWKE-- 50 + Y F R E ++ G+ + + ++ LQ + N + H + Sbjct: 1575 RLYEDFSRTHLNSDIRECLENIDGQMVSKKTHVFQALRYLQNVCNHPKLVLQPSHPEYQS 1634 Query: 51 ---------------VHDEKIKALEVII----------EKANAAPIIVAYHFNSDLARLQ 85 H K+ AL+ ++ N ++ + L ++ Sbjct: 1635 IVSEFSRNSSSLDDIEHSAKLPALKQLLLDCGIGTNEDMSVNQHRALIFCQLKAMLDIIE 1694 Query: 86 K-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 G + ++N + I +L G GLNL G + Sbjct: 1695 NDLLKKHLPAVSYLRLDGGVPPSSRHQIVTKFNGDPSIDVLLLTTQVGGLGLNLT-GADT 1753 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F W+ M + + R + G K+ V VY LI + +++E ++ + K Sbjct: 1754 VIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRKSLEEKIMGLQKFKLLTA 1808 Query: 192 DLLLNALKKET 202 + +++ Sbjct: 1809 NTIVSDENASM 1819 >gi|17551114|ref|NP_508736.1| hypothetical protein C52B9.8 [Caenorhabditis elegans] gi|13775404|gb|AAK39219.1| Hypothetical protein C52B9.8 [Caenorhabditis elegans] Length = 1336 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 75/226 (33%), Gaps = 37/226 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA-SKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 Y Q+ L L G+ S + + +L N ++ + Sbjct: 619 LYKHMQKGLL--LDGKTNTGSKSLRNTMIHLRKLCNHPFLFENVEESCRNFWDARFISAV 676 Query: 53 -----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD---------- 95 K++ L I+ K +++ + S + ++ G Sbjct: 677 DLYRVSGKLELLSRILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPD 736 Query: 96 KDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + ++N + G GLNLQ + ++ F W+ + Sbjct: 737 ERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQ 790 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V V+ LI N+++E +L R K + + ++ A K Sbjct: 791 DRAHRIGQKAEVRVFRLITANSVEEKILAAARYKLNVDEKVIQAGK 836 >gi|167527295|ref|XP_001747980.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773729|gb|EDQ87367.1| predicted protein [Monosiga brevicollis MX1] Length = 760 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 75/243 (30%), Gaps = 52/243 (21%) Query: 3 QYHKFQRELYCDLQG----------ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH 52 Y + L+ + +L N ++ +E Sbjct: 423 MYKRLIDSQAIALEDDGPGKTNQKKSGGSGPTPLAFITHLKKLCNHPELIMDKIQAREPG 482 Query: 53 DEKIKA------------------------LEVIIEKANAAPIIVAYHFNSDLARLQKAF 88 K++ + +++ +++ ++ L ++ Sbjct: 483 FAKLQDLVPAKWDSRVVSPEWSGKVMVVDAMLAMLKSTTDEKVVLISNYTQTLDLFERLC 542 Query: 89 PQ----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFS 136 Q ++ K + +N + + G G+NL G + L+ Sbjct: 543 RQRRYKYVRLDGTMSIKKRQKVVDHFNAPDSDDFIFMLSSKAGGCGINL-IGASRLILTD 601 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G +R +VY L+A TI+E +L R K+ + D +++ Sbjct: 602 PDWNPAS-----DAQALARCWRDGQRRITYVYRLVATGTIEEKILARQAHKTALSDCVID 656 Query: 197 ALK 199 + Sbjct: 657 EAE 659 >gi|159490586|ref|XP_001703254.1| chromodomain-helicase-DNA-binding protein [Chlamydomonas reinhardtii] gi|158280178|gb|EDP05936.1| chromodomain-helicase-DNA-binding protein [Chlamydomonas reinhardtii] Length = 1219 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 27/226 (11%), Positives = 74/226 (32%), Gaps = 35/226 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + +L + + + + + N ++ + +E A+ Sbjct: 478 QYYKWILTRNFKELNKSSRGGGHVSLLNIIGELKKCCNHPFLFESAEDNYRGSEEDKSAV 537 Query: 60 EVII---------------EKANAAPIIVAYHFNSDLARLQKAFP-QGRTLDK------- 96 + +I KA +++ L + +G + Sbjct: 538 DRLIVPSGKMVLLDKLLRRLKATGHRVLIFSQMVRVLDIISDYMRLRGFPHQRLDGSTPA 597 Query: 97 --DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +N P + G G+NL + ++ F W+ + + Sbjct: 598 AARHAAMEHFNRPDSPDFAFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQA 651 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++R + G V +Y + +++E +L+R + K + L++ + Sbjct: 652 MSRAHRIGQTETVNIYRFVTSGSVEEDILERAKRKMVLDHLVIQRM 697 >gi|114558338|ref|XP_001157674.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] gi|114558340|ref|XP_001157728.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] Length = 615 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 + Y + + E + + + + + + E Sbjct: 7 RYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASG 66 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 67 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 126 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + I + + G G+NL + ++F ++ + + R + G Sbjct: 127 NFGRQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 180 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 181 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 215 >gi|21071044|ref|NP_003060.2| probable global transcription activator SNF2L1 isoform a [Homo sapiens] gi|115311627|sp|P28370|SMCA1_HUMAN RecName: Full=Probable global transcription activator SNF2L1; AltName: Full=ATP-dependent helicase SMARCA1; AltName: Full=Nucleosome-remodeling factor subunit SNF2L; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 gi|57208177|emb|CAI42683.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] gi|57208838|emb|CAI42613.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] gi|109658918|gb|AAI17448.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Homo sapiens] gi|119632240|gb|EAX11835.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_c [Homo sapiens] Length = 1054 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LNALK 199 + + Sbjct: 647 IQQGR 651 >gi|66362430|ref|XP_628179.1| CHD3 ortholog with 2x chromodomains plus SNF2 ATpase (2chromo+helicase+Znf_NFX) [Cryptosporidium parvum Iowa II] gi|46227356|gb|EAK88291.1| CHD3 ortholog with 2x chromodomains plus SNF2 ATpase (2chromo+helicase+Znf_NFX) [Cryptosporidium parvum Iowa II] Length = 2055 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 72/225 (32%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEK-------------HW 48 Y Y +L S ++ ++ N + H Sbjct: 807 MYKSILTRNYDELSKSTGGTKTSLQNICMELKKVCNHPFLIHRPELDPSQGITVASIQHQ 866 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + + +++ L + + + Sbjct: 867 LVYGCGKLCLLDKLLSRLREKGSRVLIFSQMVRMLNIISEFLVLRGFRHQRLDGTMGKEL 926 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + ++ + W+ + + Sbjct: 927 RKKAMDHFNSPNSDDFCFLLSTKAGGLGINLTT-ADTVIIYDSDWNPQN-----DLQAEA 980 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V +Y L+ +++I+E +L+R +TK + L++ L Sbjct: 981 RAHRIGQKKQVQIYRLVTKDSIEENILERAKTKMVLDTLVVQGLN 1025 >gi|225432582|ref|XP_002281240.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1103 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 82/214 (38%), Gaps = 26/214 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIK 57 YH+ L + ++ + + +++ + N + + + + K + Sbjct: 654 YHQVTDLGRVGLDTGSGKSKSLQNLSMQLRKCCNHPYLFVGDYNIWQKKEEMVRASGKFE 713 Query: 58 ALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ K +++ + L+ ++ ++++N Sbjct: 714 LLDRLLPKLQKAGHRVLLFSQMTRLMDILEIYLQMNEIKYLRLDGSTKTEERGTKLKQFN 773 Query: 106 EGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 P + G GLNLQ + ++ F W+ + +++ R + G K+ Sbjct: 774 APDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQKK 827 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +I+E++L+R + K I ++ A Sbjct: 828 EVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 861 >gi|195328571|ref|XP_002030988.1| GM24274 [Drosophila sechellia] gi|194119931|gb|EDW41974.1| GM24274 [Drosophila sechellia] Length = 1923 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 77/252 (30%), Gaps = 58/252 (23%) Query: 1 MKQYHKF----QRELYCDLQGENIEAF---------NSASKTVKCLQLANGAVYYDEEKH 47 ++ Y F ++ L + + + + N + Sbjct: 1608 LRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSE 1667 Query: 48 WKEV----------------HDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLA 82 H K+ AL+ ++ + ++ + L Sbjct: 1668 EITKVTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLD 1727 Query: 83 RLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 +++ + + +N + I +L G GLNL G Sbjct: 1728 IVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-G 1786 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ M + + R + G K+ V VY LI +N+++E ++ + K Sbjct: 1787 ADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKI 1841 Query: 189 TIQDLLLNALKK 200 + +++A Sbjct: 1842 LTANTVVSAENA 1853 >gi|296826190|ref|XP_002850934.1| chromatin remodelling complex ATPase chain ISW1 [Arthroderma otae CBS 113480] gi|238838488|gb|EEQ28150.1| chromatin remodelling complex ATPase chain ISW1 [Arthroderma otae CBS 113480] Length = 1113 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 74/226 (32%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT---VKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + ++ + N + Sbjct: 431 VKWYQKILEKDIDAVNGAQGNRESKTRLVNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 490 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ + + +++ + L L+ + Sbjct: 491 IDNSGKMVILDKLLSRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDR 550 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ F W+ + + + R Sbjct: 551 IQAIDEYNRPGSEKFVFLLTTRAGGLGINLTT-ADIVILFDSDWNPQA-----DLQAMDR 604 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ I + I+E VL+R K + L++ + + Sbjct: 605 AHRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQ 650 >gi|194760847|ref|XP_001962644.1| GF14336 [Drosophila ananassae] gi|292630861|sp|B3MMA5|RAD54_DROAN RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|190616341|gb|EDV31865.1| GF14336 [Drosophila ananassae] Length = 791 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 76/236 (32%), Gaps = 47/236 (19%) Query: 1 MKQYHKF-----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--- 52 ++ Y F R D + + + + ++ + ++ KE Sbjct: 425 LQLYTNFLNSDQVRRSLADCNEK--ASLTALADITTLKKICSHPDLIHQKIEAKEKGFEN 482 Query: 53 ------------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----- 86 K L+ ++ A +++ ++ L ++ Sbjct: 483 SQNVLPSNYKPKEICPEWSGKFMLLDFMLAAIRAAGNDKVVLISNYTQTLDLFEQLARKR 542 Query: 87 -----AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWD 140 ++ K + ++N+ +S G L G N L F W+ Sbjct: 543 KYGFVRLDGTMSIKKRSKVVDKFNDPDSECFLFMLSSKAGGCGLNLIGANRLFMFDPDWN 602 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ ++Y L+A TI+E +LQR K ++ +++ Sbjct: 603 PAN-----DEQAMARVWRDGQKKPCYIYRLVASGTIEEKILQRQTHKKSLSSTIID 653 >gi|157134957|ref|XP_001663375.1| hypothetical protein AaeL_AAEL013189 [Aedes aegypti] gi|108870352|gb|EAT34577.1| conserved hypothetical protein [Aedes aegypti] Length = 1904 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 52/247 (21%) Query: 2 KQYHKFQR--------ELYCDLQGENIEAFNSASKTVKCLQ-LANGAVYYDEEKHWKE-- 50 + Y F R E ++ G+ + + ++ LQ + N + H + Sbjct: 1577 RLYEDFSRMHLNSDIRECLENIDGQIVSKKTHVFQALRYLQNVCNHPKLVLQPSHPEYQT 1636 Query: 51 -----------VHDEKIKALEVII----------EKANAAPIIVAYHFNSDLARLQK--- 86 H K+ AL+ ++ N ++ + L ++ Sbjct: 1637 ILSEISSMDDIEHSAKLPALKQLLLDCGIGTNEDMSVNQHRALIFCQLKAMLDIIENDLL 1696 Query: 87 ----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + ++N + I +L G GLNL G + ++F Sbjct: 1697 KKHLPAVSYLRLDGSVPPSSRHQIVTKFNGDPSIDVLLLTTQVGGLGLNLT-GADTVIFV 1755 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ M + + R + G K+ V VY LI + +++E ++ + K + ++ Sbjct: 1756 EHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRKSLEEKIMGLQKFKLLTANTVV 1810 Query: 196 NALKKET 202 + Sbjct: 1811 SDENASM 1817 >gi|85092588|ref|XP_959470.1| DNA repair and recombination protein RAD54 [Neurospora crassa OR74A] gi|28920899|gb|EAA30234.1| DNA repair and recombination protein RAD54 [Neurospora crassa OR74A] gi|40804592|emb|CAF05853.1| Rad54 homolog MUS-25 [Neurospora crassa] Length = 831 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + + Sbjct: 516 LKAINILKKLCNHPDLLDLSADLPGCEQYWPEDYVPKEARGRDRDVKPWYSGKMQVLDRM 575 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I I++ ++ L ++ ++K + ++N+ + Sbjct: 576 LARIRADTNDKIVLISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFNDPEG 635 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 636 DEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 689 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 690 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 721 >gi|258573727|ref|XP_002541045.1| chromatin remodelling complex ATPase chain ISW1 [Uncinocarpus reesii 1704] gi|237901311|gb|EEP75712.1| chromatin remodelling complex ATPase chain ISW1 [Uncinocarpus reesii 1704] Length = 994 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 77/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 306 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 365 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ +++ K + +++ + L L+ + Sbjct: 366 VDNAGKMVILDKLLKRLKVQGSRVLIFSQMSRVLDILEDYCVFREHAYCRIDGSTAHEDR 425 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ + W+ + + + R Sbjct: 426 IAAIDEYNRPGSEKFVFLLTTRAGGLGINLTT-ADIVILYDSDWNPQA-----DLQAMDR 479 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 480 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 525 >gi|195501119|ref|XP_002097666.1| GE24355 [Drosophila yakuba] gi|194183767|gb|EDW97378.1| GE24355 [Drosophila yakuba] Length = 1925 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 76/252 (30%), Gaps = 58/252 (23%) Query: 1 MKQYHKF----QRELYCDLQGENIEAF---------NSASKTVKCLQLANGAVYYDEEKH 47 ++ Y F ++ L + + + + N + Sbjct: 1610 LRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSE 1669 Query: 48 WKEV----------------HDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLA 82 H K+ AL+ ++ + ++ + L Sbjct: 1670 ELTKVTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLD 1729 Query: 83 RLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 ++ + + +N + I +L G GLNL G Sbjct: 1730 IVEHDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-G 1788 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ M + + R + G K+ V VY LI +N+++E ++ + K Sbjct: 1789 ADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKI 1843 Query: 189 TIQDLLLNALKK 200 + +++A Sbjct: 1844 LTANTVVSAENA 1855 >gi|226293396|gb|EEH48816.1| DNA repair and recombination protein RAD54 [Paracoccidioides brasiliensis Pb18] Length = 863 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 67/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + + W + + Sbjct: 565 LKAIGILKKLCNHPDLLNLGADLPGCEQFFPDDYIPIESRGRDRDVRSWYSGKMMVLDRM 624 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L ++ + K + ++N+ + Sbjct: 625 LARIRQDTNDKIVLISNYTQTLDLFERLCRSRQYGCLRLDGSMNVTKRQKLVDKFNDPEG 684 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 685 EEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 738 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 739 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 770 >gi|156545320|ref|XP_001605650.1| PREDICTED: similar to chromodomain helicase DNA binding protein [Nasonia vitripennis] Length = 1997 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 66/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD---------EEKHWKEV 51 K Y + L + + + + + N + +++ Sbjct: 965 KYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTGPNGNYETS 1024 Query: 52 HDEKIKALEVIIEKA------NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLD 95 K V++ + + +++ L + T Sbjct: 1025 ALIKAAGKLVLLSRMLKKLRDDGHRVLIFSQMTKMLDLLEDYLEGEGYKYERIDGNITGT 1084 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I +N + + G G+NL + ++ + W+ + Sbjct: 1085 QRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1138 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1139 SRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1180 >gi|327288760|ref|XP_003229093.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Anolis carolinensis] Length = 2059 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 1052 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1111 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1112 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGA 1171 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1172 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1225 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1226 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1267 >gi|321469421|gb|EFX80401.1| hypothetical protein DAPPUDRAFT_318579 [Daphnia pulex] Length = 1037 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 83/233 (35%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASKT---------VKCLQLANGAVYY------ 42 +K Y K QRE+Y + +I+ N A K ++ + N + Sbjct: 366 VKVYIGLSKMQREMYTKILMRDIDIVNGAGKLEKMRLQNILMQLRKCCNHPYLFDGAEPG 425 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 + K+ L+ ++ K A + +++ L L+ Sbjct: 426 PPYTTDEHIVYNCGKMVILDKLLPKLKAQGSRVLIFSQMTRMLDILEDYSLWRGYNYCRL 485 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I+E+N + G G+NL +++V F W+ + Sbjct: 486 DGSTPHEDRHRQIEEYNAPDSKKFLFMLSTRAGGLGINL-ATADVVVLFDSDWNPQ---- 540 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E ++++ K + L++ + Sbjct: 541 -MDLQAMDRAHRIGQLKQVRVFRFITDNTVEEKIVEKAEVKLRLDKLVIQQGR 592 >gi|297304754|ref|XP_002806437.1| PREDICTED: probable global transcription activator SNF2L1-like [Macaca mulatta] gi|119632241|gb|EAX11836.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, isoform CRA_d [Homo sapiens] gi|219520696|gb|AAI43955.1| SMARCA1 protein [Homo sapiens] Length = 1070 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LNALK 199 + + Sbjct: 647 IQQGR 651 >gi|73998082|ref|XP_859465.1| PREDICTED: similar to helicase, lymphoid-specific isoform 9 [Canis familiaris] Length = 692 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 63/193 (32%), Gaps = 28/193 (14%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHD---------EKIKALEVIIEKAN--AAPIIVAYHF 77 + + N + K L+ ++ + +++ Sbjct: 506 MMLLRKCCNHPYLIEYPIDPLPPFSIDEELVTNSGKFLILDRMLPELKARGHKVLLFSQM 565 Query: 78 NSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L L + + + +N + + + + G G+NL Sbjct: 566 TRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINLT 625 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 626 A-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAA 679 Query: 187 KSTIQDLLLNALK 199 K ++ L+++ K Sbjct: 680 KRKLEKLIIHKSK 692 >gi|154277928|ref|XP_001539795.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus NAm1] gi|150413380|gb|EDN08763.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus NAm1] Length = 684 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 61/191 (31%), Gaps = 23/191 (12%) Query: 26 ASKTVKCLQLANGAVYYD-----EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 +L N + D I++ ++ Sbjct: 407 LKAIGILKKLCNHPDLLNLGADLPGSEQILPDDYVSLESRGRDRDDTNDKIVLISNYTQT 466 Query: 81 LARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYG 128 L ++ + K + ++N+ + + G G+NL G Sbjct: 467 LDLFERLCRTRRYGCLRLDGTMNVTKRQKLVDKFNDPNGEEFVFLLSSKAGGCGINL-IG 525 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N LV F W+ Q + R + G K+ FVY IA TI+E + QR K Sbjct: 526 ANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQ 580 Query: 189 TIQDLLLNALK 199 ++ ++++ + Sbjct: 581 SLSSCVVDSAE 591 >gi|7384851|dbj|BAA93079.1| Rad54 homolog [Neurospora crassa] Length = 834 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + + Sbjct: 520 LKAINILKKLCNHPDLLDLSADLPGCEQYWPEDYVPKEARGRDRDVKPWYSGKMQVLDRM 579 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I I++ ++ L ++ ++K + ++N+ + Sbjct: 580 LARIRADTNDKIVLISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFNDPEG 639 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 640 DEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 693 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 694 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 725 >gi|331227507|ref|XP_003326422.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309305412|gb|EFP82003.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 939 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 69/211 (32%), Gaps = 41/211 (19%) Query: 26 ASKTVKCLQLANGAVY------------YDEEKHWKEVH--------DEKIKALEVIIEK 65 +L N Y + + + K+ LE + K Sbjct: 649 LKMLGILRKLCNHPDLLDLQQDIPGSEKYFPDGYRSKDPRAPARPELSGKMTVLERFLHK 708 Query: 66 ANA---APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP-- 110 I++ +F L ++K + + K + +N+ + Sbjct: 709 IKTETTDKIVLISNFTQTLDVMEKMCRERRWGNLRLDGTMQITKRQKLVDRFNDPEGKEF 768 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL G N L+ F W+ Q + R + G K+ FVY Sbjct: 769 IFLLSSKAGGCGINL-IGANRLILFDPDWNPASDQ-----QALARVWRDGQKKNCFVYRF 822 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I +++E V QR K + +++ + E Sbjct: 823 ILTGSVEEKVFQRQSQKMKLSASVVDEQEDE 853 >gi|73946625|ref|XP_860020.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 11 [Canis familiaris] Length = 1547 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 74/220 (33%), Gaps = 31/220 (14%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWK-----EV 51 Y Q + G + + ++ ++ N + + W+ Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEMWEVSAELYR 1022 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 K + L+ I+ K A +++ S + ++ F + Sbjct: 1023 ASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAA 1082 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++NE + + G GLNLQ + +V F W+ + + R Sbjct: 1083 LLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQAQDRAH 1136 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1137 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1176 >gi|330798162|ref|XP_003287124.1| hypothetical protein DICPUDRAFT_87450 [Dictyostelium purpureum] gi|325082902|gb|EGC36370.1| hypothetical protein DICPUDRAFT_87450 [Dictyostelium purpureum] Length = 521 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 63/175 (36%), Gaps = 18/175 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 +Y D + L +++ + ++ + S L ++ Sbjct: 341 PIYDSSNWKSSTKIDSLLDELNKVLKNEPDSKCLIFSQWTSMLDLIEIPLNINSMPFVRL 400 Query: 93 ----TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + I+ + E I + + G GLNL + + WW+ +Q Sbjct: 401 DGKIPQKQREVAIKRFKEEPSIKIFLISIKAGGLGLNL-VVASHVFLCDPWWNPATEEQA 459 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 I+R+ + G + V V +++I+E +L+ ++K + L +KK+ Sbjct: 460 IDRV-----YRIGQNKNVNVIRFFIKDSIEEKILELQKSKKDLAKEAL-TMKKQP 508 Score = 37.8 bits (86), Expect = 0.87, Method: Composition-based stats. Identities = 5/60 (8%), Positives = 13/60 (21%), Gaps = 6/60 (10%) Query: 2 KQYHKFQREL-----YCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + G + + ++ Q N + + + Sbjct: 13 KMYQDLWKSAKSRFNILFQNGSLLKNYAHVLEMLLRLRQACNHPFLALKNQSGAGSNSLM 72 >gi|297737012|emb|CBI26213.3| unnamed protein product [Vitis vinifera] Length = 1110 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 82/214 (38%), Gaps = 26/214 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIK 57 YH+ L + ++ + + +++ + N + + + + K + Sbjct: 654 YHQVTDLGRVGLDTGSGKSKSLQNLSMQLRKCCNHPYLFVGDYNIWQKKEEMVRASGKFE 713 Query: 58 ALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ K +++ + L+ ++ ++++N Sbjct: 714 LLDRLLPKLQKAGHRVLLFSQMTRLMDILEIYLQMNEIKYLRLDGSTKTEERGTKLKQFN 773 Query: 106 EGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 P + G GLNLQ + ++ F W+ + +++ R + G K+ Sbjct: 774 APDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQKK 827 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +I+E++L+R + K I ++ A Sbjct: 828 EVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 861 >gi|126344594|ref|XP_001379453.1| PREDICTED: similar to Snf2-related CBP activator protein,, partial [Monodelphis domestica] Length = 3130 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 70/179 (39%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP 89 ++ + + K++ L V++ KA A +++ L L++ Sbjct: 2041 LHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRRLKAGAHRVLIFTQMTRMLDVLEQFLT 2100 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + ++ +N + +I S G G+NL G + ++F+ Sbjct: 2101 YHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT-GADTVIFYDSD 2159 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 2160 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEG 2213 >gi|114558334|ref|XP_001157776.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] Length = 783 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 + Y + + E + + + + + + E Sbjct: 175 RYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASG 234 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 235 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 294 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + I + + G G+NL + ++F ++ + + R + G Sbjct: 295 NFGRQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 348 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 349 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 383 >gi|68164076|gb|AAY87153.1| ciprofibrate bound protein p240 isoform PRIC320-2 [Homo sapiens] Length = 1995 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 222 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 281 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 282 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 341 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 342 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 398 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 399 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 455 >gi|256072060|ref|XP_002572355.1| helicase [Schistosoma mansoni] gi|238657512|emb|CAZ28586.1| helicase, putative [Schistosoma mansoni] Length = 1016 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 82/233 (35%), Gaps = 41/233 (17%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNS----------ASKTVKCLQLANGAVYYD----- 43 K Y K QR+LY + ++I+ NS + ++ + N +D Sbjct: 340 KIYIGLSKMQRDLYTKILMKDIDVVNSVGNKVDRLRLLNILMQLRKCCNHPYLFDGLEPG 399 Query: 44 -----EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 + + + K + +++ + L+ Sbjct: 400 PPFTTDHHLVDNCGKLMLLDKLLPKLKQQGSRVLLFCQMTRMMDILEDYCLWRGHEYFRL 459 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +I E+N + G G+NL ++++ + W+ + Sbjct: 460 DGSTPHEERQISIDEYNRPGSTKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ---- 514 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ LI ++T++E ++ R K + +L++ + Sbjct: 515 -VDLQAMDRAHRIGQTKTVRVFRLITEHTVEERIIMRAEMKLKLDNLVIQQGR 566 >gi|198455729|ref|XP_001357539.2| GA21216 [Drosophila pseudoobscura pseudoobscura] gi|198135371|gb|EAL24661.2| GA21216 [Drosophila pseudoobscura pseudoobscura] Length = 1035 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QR+ Y + ++I+ N A K ++ + N + Sbjct: 375 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 434 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 435 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWKNYNYCRLDGQTPHED 494 Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + + G G+NL ++++ + W+ + ++ + Sbjct: 495 RNRQIQEYNMENSTKFVFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 548 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 549 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 593 >gi|171683845|ref|XP_001906864.1| hypothetical protein [Podospora anserina S mat+] gi|170941883|emb|CAP67535.1| unnamed protein product [Podospora anserina S mat+] Length = 1062 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 58/178 (32%), Gaps = 20/178 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA------------RLQ 85 Y K+ + +++ I+ + S L R Sbjct: 871 RRYMHYLRDNWEDSAKVTQVIELLKTIQETNEKTIIFSQWTSLLDLIECQIKYSLKLRHC 930 Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +D + ++ + GLNL + ++ +W+ Sbjct: 931 RYTGDMSRTHRDEAVQDFVENPENKVMLVSLRAGNAGLNLT-CASRVIICDPFWNP---- 985 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 IE V R + G ++ V V+ ++ + T+++ ++ K + + L+ K + + Sbjct: 986 -FIEMQAVDRAHRIGQQKEVQVHRILVKETVEDRIMDLQEKKRELVESALDEDKSKQL 1042 Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 3/44 (6%), Positives = 7/44 (15%), Gaps = 6/44 (13%) Query: 4 YHKFQRELYCDLQG----ENI--EAFNSASKTVKCLQLANGAVY 41 Y + + N ++ Q Sbjct: 593 YKDLEERSQVVFNKYLRAGTVGRNYSNILVLLLRLRQACCHPHL 636 >gi|290878263|emb|CBK39322.1| Isw1p [Saccharomyces cerevisiae EC1118] Length = 1069 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 77/229 (33%), Gaps = 35/229 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYYD----------EEKHW 48 K Y K + + G N + + ++ + N +D +E Sbjct: 379 KWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLV 438 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDP 98 ++ + K + +++ + + Sbjct: 439 YNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRI 498 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N + + G G+NL +++V + W+ + + + R Sbjct: 499 QAIDDYNAPDSKKFVFLLTTRAGGLGINLTS-ADVVVLYDSDWNPQA-----DLQAMDRA 552 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN----ALKKE 201 + G K+ V V+ L+ N+++E +L+R K + L++ +LKK+ Sbjct: 553 HRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKK 601 >gi|224064310|ref|XP_002193588.1| PREDICTED: chromodomain helicase DNA binding protein 9 [Taeniopygia guttata] Length = 2346 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 70/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 578 KYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNP 637 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 638 SAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 697 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 698 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 754 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY LI +N+ + + R K + +L ++ V Sbjct: 755 ---DLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSV 811 >gi|148675685|gb|EDL07632.1| transcription termination factor, RNA polymerase II [Mus musculus] Length = 1138 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 66/241 (27%), Gaps = 67/241 (27%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------------------------- 53 + S+ ++ Q E+ Sbjct: 888 STVHVLSQLLRLRQCCCHLSLLKSALDPTELESEGLVLSLEEQLSALTLSKVDVSEPSPT 947 Query: 54 -----------------------EKIKALEVIIEKANAAPIIVAYHFNSDLA-------- 82 + LE I + + ++ + S L Sbjct: 948 VSLNGTCFKAELFDDTRRSTKVSSLLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLKK 1007 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 1008 NRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1066 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + Q +RI + G K+ V ++ + + T++E +LQ K + +L+ + Sbjct: 1067 NPSLEDQACDRI-----YRVGQKKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSE 1121 Query: 200 K 200 Sbjct: 1122 G 1122 >gi|123296349|emb|CAI26225.2| transcription termination factor, RNA polymerase II [Mus musculus] Length = 1139 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 66/241 (27%), Gaps = 67/241 (27%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------------------------- 53 + S+ ++ Q E+ Sbjct: 889 STVHVLSQLLRLRQCCCHLSLLKSALDPTELESEGLVLSLEEQLSALTLSKVDVSEPSPT 948 Query: 54 -----------------------EKIKALEVIIEKANAAPIIVAYHFNSDLA-------- 82 + LE I + + ++ + S L Sbjct: 949 VSLNGTCFKAELFDDTRRSTKVSSLLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLKK 1008 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 1009 NRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1067 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + Q +RI + G K+ V ++ + + T++E +LQ K + +L+ + Sbjct: 1068 NPSLEDQACDRI-----YRVGQKKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSE 1122 Query: 200 K 200 Sbjct: 1123 G 1123 >gi|56611125|gb|AAH87733.1| Transcription termination factor, RNA polymerase II [Mus musculus] Length = 1138 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 66/241 (27%), Gaps = 67/241 (27%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------------------------- 53 + S+ ++ Q E+ Sbjct: 888 STVHVLSQLLRLRQCCCHLSLLKSALDPTELESEGLVLSLEEQLSALTLSKVDVSEPSPT 947 Query: 54 -----------------------EKIKALEVIIEKANAAPIIVAYHFNSDLA-------- 82 + LE I + + ++ + S L Sbjct: 948 VSLNGTCFKAELFDDTRRSTKVSSLLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLKK 1007 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 1008 NRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1066 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + Q +RI + G K+ V ++ + + T++E +LQ K + +L+ + Sbjct: 1067 NPSLEDQACDRI-----YRVGQKKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSE 1121 Query: 200 K 200 Sbjct: 1122 G 1122 >gi|254692909|ref|NP_001013044.2| transcription termination factor 2 [Mus musculus] gi|152031718|sp|Q5NC05|TTF2_MOUSE RecName: Full=Transcription termination factor 2; AltName: Full=RNA polymerase II termination factor; AltName: Full=Transcription release factor 2 gi|66911227|gb|AAH96625.1| Transcription termination factor, RNA polymerase II [Mus musculus] gi|123294595|emb|CAM22070.1| transcription termination factor, RNA polymerase II [Mus musculus] Length = 1138 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 66/241 (27%), Gaps = 67/241 (27%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------------------------- 53 + S+ ++ Q E+ Sbjct: 888 STVHVLSQLLRLRQCCCHLSLLKSALDPTELESEGLVLSLEEQLSALTLSKVDVSEPSPT 947 Query: 54 -----------------------EKIKALEVIIEKANAAPIIVAYHFNSDLA-------- 82 + LE I + + ++ + S L Sbjct: 948 VSLNGTCFKAELFDDTRRSTKVSSLLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLKK 1007 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 1008 NRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1066 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + Q +RI + G K+ V ++ + + T++E +LQ K + +L+ + Sbjct: 1067 NPSLEDQACDRI-----YRVGQKKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSE 1121 Query: 200 K 200 Sbjct: 1122 G 1122 >gi|316969757|gb|EFV53807.1| domain protein, SNF2 family [Trichinella spiralis] Length = 527 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 78/224 (34%), Gaps = 35/224 (15%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DE 54 + ++L + A + ++ N ++ +++ Sbjct: 278 DEMDKQLLMSYISKKQHA------MMCLRKVTNHPYLLSDKVIDDQINEANKQEVISSSG 331 Query: 55 KIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K+ L+ ++ K +++ F + L + + + Sbjct: 332 KMIVLDRLLEGLFKEGDHKVLIFTQFVEMIHILSFYCEYRNYKFCSLYGKMSFGERQDEV 391 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +G+ + + GLNL + ++ F W+ + + R + G Sbjct: 392 DRFTKGEASVFLISTRAGNLGLNLMA-ADTVILFDSDWNPQ-----CDLQASDRCHRIGQ 445 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V +Y L+A+ TIDE+++ R ++K +++ + E + + Sbjct: 446 TKPVLIYRLVAKGTIDEIMVDRAQSKRKLENASEKLTEAELLEI 489 >gi|51893808|ref|YP_076499.1| SNF2 family helicase [Symbiobacterium thermophilum IAM 14863] gi|51857497|dbj|BAD41655.1| Snf2 family helicase-like protein [Symbiobacterium thermophilum IAM 14863] Length = 499 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 26/184 (14%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD-- 80 + + + QL N K+ LE + A ++ + Sbjct: 300 ALTLLNQLKQLCN--------LDPATGASCKLAFLEQELAPLVARGEKAVIFSQYPKVTL 351 Query: 81 ---LARLQKA----FPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNIL 132 L RL+ F + K + + G +L + G G+ L N + Sbjct: 352 EPLLPRLEPFGAVLFDGSLSDWKRQLIVHHFQHGDMPRVLAMSLKAGGVGITLTR-ANHV 410 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 WW+ Q R + G +R VFV L+ + T++E + + + K + Sbjct: 411 YHLDHWWNPAVAQ-----QAEDRTHRIGQRRPVFVTTLLTRGTVEERIAELVERKRELFH 465 Query: 193 LLLN 196 +++ Sbjct: 466 EVMD 469 >gi|154344042|ref|XP_001567965.1| DNA-dependent ATPase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065299|emb|CAM40727.1| putative DNA-dependent ATPase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1103 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 78/225 (34%), Gaps = 39/225 (17%) Query: 8 QRELYCDLQGENIEAFNSA--------SKTVKCLQLANGAVYYDEEKHWKEV-------- 51 QRE Y ++ ++ E N A + + ++ N + + Sbjct: 409 QREWYMNVLAKDAEVLNKAGGSVASLTNVMMGLRKVINHPYLMEGGEEGPPFVTDEKLVR 468 Query: 52 HDEKIKALEVIIEK-----ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K+ L+ ++ + +++ F S L L+ + + Sbjct: 469 TSGKMIILDKLLHRLRADVQGKHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSGYE 528 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + + G G+NLQ N ++ + W+ + ++ Sbjct: 529 RDSQMASFNSPTSDYFIFLLSTRAGGLGINLQA-ANHVILYDSDWNPQ-----MDLQAQD 582 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G KR+V VY + T++E + +R K + +++ + Sbjct: 583 RAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQQGR 627 >gi|195148944|ref|XP_002015422.1| GL11075 [Drosophila persimilis] gi|194109269|gb|EDW31312.1| GL11075 [Drosophila persimilis] Length = 1033 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QR+ Y + ++I+ N A K ++ + N + Sbjct: 375 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 434 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 435 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWKNYNYCRLDGQTPHED 494 Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + + G G+NL ++++ + W+ + ++ + Sbjct: 495 RNRQIQEYNMENSTKFVFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 548 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 549 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 593 >gi|195124267|ref|XP_002006615.1| GI18485 [Drosophila mojavensis] gi|193911683|gb|EDW10550.1| GI18485 [Drosophila mojavensis] Length = 1020 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QR+ Y + ++I+ N A K ++ + N + Sbjct: 365 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 424 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 425 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 484 Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + + G G+NL ++++ + W+ + ++ + Sbjct: 485 RNRQIQEYNMENSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 538 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 539 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 583 >gi|242089493|ref|XP_002440579.1| hypothetical protein SORBIDRAFT_09g003430 [Sorghum bicolor] gi|241945864|gb|EES19009.1| hypothetical protein SORBIDRAFT_09g003430 [Sorghum bicolor] Length = 1127 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 76/214 (35%), Gaps = 28/214 (13%) Query: 4 YHKF-QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIK 57 Y + RE G +A + S ++ + N + E + + K + Sbjct: 692 YEQVTSREKVALGSGLRSKALQNLS--MQLRKCCNHPYLFVEHYNMYQREEIVRASGKFE 749 Query: 58 ALEVIIEKAN--AAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWN 105 L+ ++ K +++ ++ + ++N Sbjct: 750 LLDRLLPKLQRAGHRVLLFSQMTKLLDVLEVYLQMYNFKYMRLDGSTKTEERGRLLADFN 809 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + + G GLNLQ + ++ F W+ + +++ R + G K Sbjct: 810 KKDSEYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQKN 863 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +I+E +L R + K I ++ A Sbjct: 864 EVRVFVLVSVGSIEEEILDRAKQKMGIDAKVIQA 897 >gi|323310031|gb|EGA63226.1| Isw1p [Saccharomyces cerevisiae FostersO] Length = 1069 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 77/229 (33%), Gaps = 35/229 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYYD----------EEKHW 48 K Y K + + G N + + ++ + N +D +E Sbjct: 379 KWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLV 438 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDP 98 ++ + K + +++ + + Sbjct: 439 YNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRI 498 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N + + G G+NL +++V + W+ + + + R Sbjct: 499 QAIDDYNAPDSKKFVFLLTTRAGGLGINLTS-ADVVVLYDSDWNPQA-----DLQAMDRA 552 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN----ALKKE 201 + G K+ V V+ L+ N+++E +L+R K + L++ +LKK+ Sbjct: 553 HRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKK 601 >gi|310779269|ref|YP_003967602.1| SNF2-related protein [Ilyobacter polytropus DSM 2926] gi|309748592|gb|ADO83254.1| SNF2-related protein [Ilyobacter polytropus DSM 2926] Length = 920 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 80/213 (37%), Gaps = 27/213 (12%) Query: 2 KQYHKFQRELYC----DLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + Y ++ I + QLA+ E K V K Sbjct: 699 KIYDERRLFYYDLIHNQIKEHGIGKSQIFILQALNELRQLAS----CPEMKTEGLVSSTK 754 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQEW 104 + L I + N I++ +F D ++ + G T D+ + Sbjct: 755 REILIENIREAVDNGHKILIFTNFIRSIENICEDLDKHNIKHLYMTGATKDRQSLVEKFQ 814 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ K + + G GLNL + + + WW+ + E V R + G R Sbjct: 815 NDKKCKVFVMTLKTGGVGLNLTA-ADTIFIYDPWWN-----KTAEDQAVDRSHRMGQDRT 868 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VF Y LI + TI+E +L+ KS + + L+++ Sbjct: 869 VFSYKLITKGTIEEKILKLQEEKSRLFEKLISS 901 >gi|168056923|ref|XP_001780467.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162668143|gb|EDQ54757.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 698 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 62/164 (37%), Gaps = 19/164 (11%) Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 + K +AL ++ + ++ + + L L+ + Sbjct: 510 DHHALASAKCRALVTLLPQLKKEGHRPLIFSQWTNMLDILEWALDVIGLRFTRLDGSTPV 569 Query: 95 DKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + E+N I + + G GLNL G + ++ + ++ + ++R Sbjct: 570 TERQNLVDEYNNNPDIFVFLLSTRAGGQGLNLT-GADTVIIHDVDFNPQ-----MDRQAE 623 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V VY L+ + T+DE + + + K + +L + Sbjct: 624 DRCHRIGQTKPVTVYRLVTKGTVDESIFRIAQQKLVLDAAVLES 667 >gi|332024475|gb|EGI64673.1| Putative DNA helicase Ino80 [Acromyrmex echinatior] Length = 1115 Score = 97.5 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCT 100 K+ L+ ++ K +++ + L++ + D+ Sbjct: 565 GKLSVLDSLLRRLKEQGHRVLIYSQMTKMIDLLEEYMYHRKHTFMRLDGSSKISDRRDMV 624 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + + G G+NL + ++F+ W+ +++ + R + G Sbjct: 625 ADFQKRADIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHRLG 678 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 679 QTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 715 >gi|149636100|ref|XP_001509337.1| PREDICTED: similar to chromodomain helicase DNA binding protein 6 [Ornithorhynchus anatinus] Length = 2613 Score = 97.5 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 26/237 (10%), Positives = 64/237 (27%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + + L N + ++ + N + + K + Sbjct: 853 KYYRAILEKNFSFLAKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 912 Query: 60 EVIIEKAN----------------------AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 + + + +++ L R + Sbjct: 913 DALDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDXXXSFGFPTRYTYER 972 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 973 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1029 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 1030 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 1083 >gi|293418289|gb|ABY48151.3| Mot1 [Triticum monococcum subsp. aegilopoides] Length = 2069 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 67/261 (25%) Query: 1 MKQYHKF----QRELYCDLQGENIE---------AFNSASKTVKCLQLANGAVYYDEEKH 47 +K Y KF +E + + + L+L + + E Sbjct: 1737 LKLYDKFSSSNVKEEISTIVKADESEPSTSQPKATRHVFQALQYLLKLCSHPLLVIGESP 1796 Query: 48 WKEV-------------------HDEKIKALEVIIEKAN---------------AAPIIV 73 + + H K+ AL+ I+++ +++ Sbjct: 1797 PEYIVEHLKEIGMGTGDELHELHHSPKLVALQEILQECGIGSEISSPDASAAVGQHRVLI 1856 Query: 74 AYHFNSDLARLQKAFPQGRTL-------------DKDPCTIQEWN-EGKIPLLFAHPASC 119 + L ++K Q DK ++ +N + I +L Sbjct: 1857 FAQHKAFLDIIEKDLFQSHMRSVTYLRLDGSVQTDKRFEIVKTFNSDPTIDVLLLTTHVG 1916 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + LVF W+ M + + R + G ++ V V+ LI + T++E Sbjct: 1917 GLGLNLTS-ADTLVFMEHDWNP-----MKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEK 1970 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R K ++ + ++N+ Sbjct: 1971 VMSLQRFKVSVANAVINSENA 1991 >gi|254569384|ref|XP_002491802.1| Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes [Pichia pastoris GS115] gi|238031599|emb|CAY69522.1| Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes [Pichia pastoris GS115] Length = 1061 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 84/227 (37%), Gaps = 39/227 (17%) Query: 6 KFQRELYCDLQGENIEAF-----------NSASKTVKCLQLANGAVYYDEEK-------- 46 QR+ Y + ++I+A + ++ + N ++ + Sbjct: 399 DMQRQWYQKILEKDIDAVVSSSGKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPFTTD 458 Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRT----------L 94 + +K+K L+ +++ K + +++ + L L+ Sbjct: 459 EHLVFNAQKMKVLDKLLKRKKEQGSRVLIFSQMSRMLDILEDYCNFREYGYCRIDGQTDH 518 Query: 95 DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I ++N + + + G G+NL + ++ + W+ + + Sbjct: 519 SDRIDAIDDYNRKDSDKFVFLLTTRAGGLGINLTS-ADTVILYDSDWNPQA-----DLQA 572 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G + V+VY L+ +N I+E VL+R + K + L++ + Sbjct: 573 MDRAHRIGQTKQVYVYRLVTENAIEEKVLERAQQKLRLDQLVIQQGR 619 >gi|326431585|gb|EGD77155.1| CHD1 protein [Salpingoeca sp. ATCC 50818] Length = 1497 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 79/234 (33%), Gaps = 44/234 (18%) Query: 2 KQYHKFQRELYCDLQGENIEA---------FNSA-SKTVKCLQLANGAVYYDEEKHWKEV 51 + Y + E ++ + ++ +L N + E + Sbjct: 720 QLYKHMKEHGVLLTGDEAKSKSGHHHKKRTVHALRNTLMQLRKLCNHPFLFKEIEVAYAR 779 Query: 52 HDEKIKALEVIIEKANA----------------APIIVAYHFNSDLARLQKAF------- 88 H + + +A+ +++ L L+ F Sbjct: 780 HRSLQYVHDEDLWRASGKLELLTRMLPKFKASKHKVLLFSQMTQLLTILEDFFTAIGLTY 839 Query: 89 ---PQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 G + ++ ++E+N +I + + G GLNLQ + ++ F W+ + Sbjct: 840 IRLDGGTSDEERGRQVKEFNSPDSQIDVFVLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQ 898 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K V V+ L + N+++E +L+ R K + + ++ A Sbjct: 899 -----DLQAQDRAHRIGQKNEVRVFRLCSINSVEETILEAARFKLNVDEKVIQA 947 >gi|301165746|emb|CBW25318.1| putative helicase [Bacteriovorax marinus SJ] Length = 1049 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 19/184 (10%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN--- 78 ++ Q ++K + KI+ L +E+ IV F Sbjct: 851 EILKGLLQLRQSCLWQSPTAGL-NYKNIASTKIEFLVEQLEQIIEEGHQTIVFSQFTTYL 909 Query: 79 -------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 SD +++ K + ++ GK + + G GLNL + Sbjct: 910 DLIQNTLSDKHWRLSRIDGSQSIKKRQQQVDDFQSGKSDVFLISLKAGGVGLNLTA-ASY 968 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + WW+ +E + R + G + + VY I +++++E VL+ K + Sbjct: 969 VFIMDPWWNPA-----VESQAIDRAHRIGQQNTLTVYRPIIKDSVEEKVLKLQEMKKQLF 1023 Query: 192 DLLL 195 LL Sbjct: 1024 KDLL 1027 >gi|261860470|dbj|BAI46757.1| chromodomain helicase DNA binding protein 9 [synthetic construct] Length = 2012 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 222 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 281 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 282 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 341 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 342 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 398 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 399 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 455 >gi|73946627|ref|XP_860059.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 12 [Canis familiaris] Length = 1549 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 72/222 (32%), Gaps = 33/222 (14%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVHD--- 53 Y Q + G + + ++ ++ N + + Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEDVLPPKSVAL 1022 Query: 54 ----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 K + L+ I+ K A +++ S + ++ F + Sbjct: 1023 YRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR 1082 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++++NE + + G GLNLQ + +V F W+ + + R Sbjct: 1083 AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQAQDR 1136 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1137 AHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1178 >gi|327285131|ref|XP_003227288.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Anolis carolinensis] Length = 2471 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 73/237 (30%), Gaps = 43/237 (18%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVY-----------YDEEKHW 48 K Y + + L + N + ++ + N + + H Sbjct: 1038 KYYRAILEKNFNFLSKGAGHSNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFRDSCHH 1097 Query: 49 KEVH----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 H K+ ++ ++ K +++ L L+ Q R L + Sbjct: 1098 HVPHDFPLQAMVRSSGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQKRYLYE 1157 Query: 97 D----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I +++ + + G G+NL + + F W+ + Sbjct: 1158 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN- 1215 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1216 ----DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1268 >gi|301766462|ref|XP_002918636.1| PREDICTED: probable global transcription activator SNF2L1-like isoform 1 [Ailuropoda melanoleuca] Length = 1054 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVELLGQREAIEAFNVPNSNKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LNALK 199 + + Sbjct: 647 IQQGR 651 >gi|301107063|ref|XP_002902614.1| chromodomain protein, putative [Phytophthora infestans T30-4] gi|262098488|gb|EEY56540.1| chromodomain protein, putative [Phytophthora infestans T30-4] Length = 1748 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 64/223 (28%), Gaps = 34/223 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--EEKHWKEVH------ 52 K Y L G N + ++ + N E+K Sbjct: 982 KYYRAIFERNRQFLNMGATGTVANLVNVEMELRKCCNHPFLIRGVEDKECVGFDEQLRMK 1041 Query: 53 -----DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K L+ ++ + +++ F L ++ + Sbjct: 1042 ILIQASGKTVLLDKLLTKFRQENKKVLIFSQFKIMLDIIEDMCQLRGYSMERLDGSVRGN 1101 Query: 98 --PCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL ++++ F W+ + + V Sbjct: 1102 SRQAAIDRFNSPDSDTFAFLLSTRAGGVGINL-IAASVVILFDSDWNPQN-----DLQAV 1155 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G ++V +Y L+ + T + + + K + + Sbjct: 1156 ARCHRIGQTQSVNIYRLVTKKTYEAQMFEIASKKLGMHHAVFE 1198 >gi|156845729|ref|XP_001645754.1| hypothetical protein Kpol_1010p11 [Vanderwaltozyma polyspora DSM 70294] gi|156116422|gb|EDO17896.1| hypothetical protein Kpol_1010p11 [Vanderwaltozyma polyspora DSM 70294] Length = 661 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 79/224 (35%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEK 46 + QR+ Y L ++I+A N A ++ + N + Sbjct: 384 QMQRKWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 443 Query: 47 HWKEVHDEKI--KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ + K + + +++ + L L+ + Sbjct: 444 EHLVFNSGKMIILDKLLKKLKESGSRVLIFSQMSRLLDILEDYCYFRGYNYCRIDGSTSH 503 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I E+NE + + G G+NL + +V + W+ + + Sbjct: 504 EERIEAIDEYNEPDSDKFVFLLTTRAGGLGINLVT-ADTVVLYDSDWNPQA-----DLQA 557 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V VY + +N I+E V++R K + L++ Sbjct: 558 MDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 601 >gi|150866895|ref|XP_001386641.2| Nuclear protein STH1/NPS1 (Chromatin structure remodeling complex protein STH1) (SNF2 homolog) [Scheffersomyces stipitis CBS 6054] gi|149388151|gb|ABN68612.2| Nuclear protein STH1/NPS1 (Chromatin structure remodeling complex protein STH1) (SNF2 homolog) [Scheffersomyces stipitis CBS 6054] Length = 1259 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 76/227 (33%), Gaps = 38/227 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + + + + A + K ++ ++ N ++E + ++ K+ Sbjct: 734 LYQQMLKHNAFFVGADAGGAKSGIKGLNNKIMQLRKICNHPFVFEEVEAV--LNSSKLTN 791 Query: 59 LEVI--------------IEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + KA+ +++ + + ++ Sbjct: 792 DLIWRTSGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRWRDMKYLRLDGSTKA 851 Query: 95 DKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++ +N + G GLNLQ + ++ F W+ + + Sbjct: 852 EDRQEMLKVFNAPNSDYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQA 905 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI ++++E++L+R K I ++ A K Sbjct: 906 QDRAHRIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKVIQAGK 952 >gi|242045708|ref|XP_002460725.1| hypothetical protein SORBIDRAFT_02g033850 [Sorghum bicolor] gi|241924102|gb|EER97246.1| hypothetical protein SORBIDRAFT_02g033850 [Sorghum bicolor] Length = 614 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 79/227 (34%), Gaps = 33/227 (14%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHDEK 55 + Y + Y L+ G+ + + ++ ++ N E + +HD + Sbjct: 225 EYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHDMR 284 Query: 56 IK--------ALEVIIEKANAAPIIVAYHFNSDLARLQKA------------FPQGRTLD 95 IK + I +++ L L+ ++ Sbjct: 285 IKASAKLALLHSMLKILHKEGHRVLIFSQMTKLLDILEDYLTLEFGPKTFERVDGSVSVA 344 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I +N+ K + SCG G+NL + ++ + ++ + + Sbjct: 345 ERQAAIARFNQDKTRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNP-----HADIQAMN 398 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + VY L+ + +++E +LQ + K + L +N + + Sbjct: 399 RAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSESQ 445 >gi|119194699|ref|XP_001247953.1| hypothetical protein CIMG_01724 [Coccidioides immitis RS] Length = 846 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 65/212 (30%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 486 LKAIGILKKLCNHPDLLNLSADLPGSEQFFPDDYVPPEGRGRDRDVKSWYSGKMMVLDRM 545 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K T+ K + +N+ Sbjct: 546 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDPDG 605 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 606 EEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 659 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K + ++++ + Sbjct: 660 YRFIATGSIEEKIFQRQSHKQLLSSCVVDSAE 691 >gi|73946629|ref|XP_860094.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 13 [Canis familiaris] Length = 1550 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 76/223 (34%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKH-WKEVH----- 52 Y Q + G + A + ++ ++ N + + + VH Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGGAKTLMNTIMQLRKICNHPYMFQHIEDIFCPVHHEKST 1022 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ I+ K A +++ S + ++ F + Sbjct: 1023 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1082 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++++NE + + G GLNLQ + +V F W+ + + Sbjct: 1083 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQAQD 1136 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1179 >gi|67474889|ref|XP_653178.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica HM-1:IMSS] gi|56470108|gb|EAL47792.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 1641 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 74/223 (33%), Gaps = 34/223 (15%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + L + + + ++ ++ N + + Sbjct: 898 KYYRALYDKNREFLNKGCVGSNVPHLQNLMIQLRKVCNHPFLIPGVEEKEIANPDDPESY 957 Query: 51 -----VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K N +++ L L+K + + Sbjct: 958 AQELIKSSGKMVLLDKLLPKLNADGHKVLIFSQLKGVLDILEKYLSYKKYTYERLDGSVR 1017 Query: 98 ----PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I + +G+ + + G G+NL + ++ + W+ + + Sbjct: 1018 SNDRQNAIDRFMKGERFVFLLCTRAGGIGINL-SEADTVIIYDSDWNPQN-----DLQAQ 1071 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V VY L+++NT + + +R K + +L+ Sbjct: 1072 ARCHRIGQKKEVKVYRLVSKNTYERYMFERASMKLGLDQAILS 1114 >gi|293417053|gb|ACU00616.1| Mot1 protein [Triticum monococcum subsp. monococcum] Length = 2069 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 67/261 (25%) Query: 1 MKQYHKF----QRELYCDLQGENIE---------AFNSASKTVKCLQLANGAVYYDEEKH 47 +K Y KF +E + + + L+L + + E Sbjct: 1737 LKLYDKFSSSNVKEEISTIVKADESEPSTSQPKATRHVFQALQYLLKLCSHPLLVIGESP 1796 Query: 48 WKEV-------------------HDEKIKALEVIIEKAN---------------AAPIIV 73 + + H K+ AL+ I+++ +++ Sbjct: 1797 PEYIVEHLKEIGMGTGDELHELHHSPKLVALQEILQECGIGSEISSPDASAAVGQHRVLI 1856 Query: 74 AYHFNSDLARLQKAFPQGRTL-------------DKDPCTIQEWN-EGKIPLLFAHPASC 119 + L ++K Q DK ++ +N + I +L Sbjct: 1857 FAQHKAFLDIIEKDLFQSHMRSVTYLRLDGSVQTDKRFEIVKTFNSDPTIDVLLLTTHVG 1916 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + LVF W+ M + + R + G ++ V V+ LI + T++E Sbjct: 1917 GLGLNLTS-ADTLVFMEHDWNP-----MKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEK 1970 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R K ++ + ++N+ Sbjct: 1971 VMSLQRFKVSVANAVINSENA 1991 >gi|320586895|gb|EFW99558.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 1541 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 75/214 (35%), Gaps = 31/214 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK-----------EVHD 53 K R L ++ + + + + + + ++ + Sbjct: 953 EKMARILMAEVPQSELRQPDLKHLISELRD-CSDFELHTWCRDYRCIRKFDFPDDLFLQS 1011 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTI 101 K++ L ++ + N +V F L L++ +++ I Sbjct: 1012 GKVQELLRLVQKFQKNGDRALVFTRFARVLNILRECMTTSGLDYVSLEGATRVEERQAII 1071 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N IP+ S G G+NL N ++ F + ++ + R + G Sbjct: 1072 DEFNGNADIPVFLLTTGSGGTGINLTA-ANKVIIFDQSDNPQD-----DVQAENRAHRLG 1125 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R V V L+ + TI+ELV + +TK + + + Sbjct: 1126 QTRDVEVIKLVTRGTIEELVYKACQTKLELAERV 1159 >gi|310791634|gb|EFQ27161.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1893 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 76/248 (30%), Gaps = 59/248 (23%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKH--------- 47 K + F R+ LQ E + +L N + H Sbjct: 1563 KLFDDFTRKQGKKLQEEAGREDKDAKSHIFQALQYMRKLCNSPAMVMKPGHGMYEETQRI 1622 Query: 48 --------WKEVHDEKIKALEVIIEKA-----------------NAAPIIVAYHFNSDLA 82 VH K+ AL ++ +V L Sbjct: 1623 LRKQGTSLEDPVHAPKLTALRDLLVDCGIGVEEAESNDPLYQPIKPHRALVFCQMKEMLD 1682 Query: 83 RLQKAF-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 +Q G +K + ++N + +L + G GLNL G Sbjct: 1683 MVQNTVLKSMLPGVTYLRLDGGVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT-G 1741 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ ++ + R + G K+ V VY L+ + T++E +L R K Sbjct: 1742 ADTVIFVEHDWNPQKDM-----QAMDRAHRIGQKKVVNVYRLVTRGTLEEKILSLQRFKI 1796 Query: 189 TIQDLLLN 196 + ++N Sbjct: 1797 DVASTVVN 1804 >gi|292496|gb|AAA80559.1| transcription activator [Homo sapiens] Length = 976 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 335 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 394 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 395 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 454 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 455 DGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 513 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 514 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 568 Query: 195 LNALK 199 + + Sbjct: 569 IQQGR 573 >gi|116198517|ref|XP_001225070.1| hypothetical protein CHGG_07414 [Chaetomium globosum CBS 148.51] gi|88178693|gb|EAQ86161.1| hypothetical protein CHGG_07414 [Chaetomium globosum CBS 148.51] Length = 1727 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 58/157 (36%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1439 DSGKLAKLDELLRQLKEGGHRVLLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKLEDRRD 1498 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1499 TVADFQTRPEIFIFLLSTRAGGLGINLTT-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1552 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1553 LGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1589 >gi|330797032|ref|XP_003286567.1| hypothetical protein DICPUDRAFT_97424 [Dictyostelium purpureum] gi|325083472|gb|EGC36924.1| hypothetical protein DICPUDRAFT_97424 [Dictyostelium purpureum] Length = 1281 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 73/219 (33%), Gaps = 30/219 (13%) Query: 3 QYHKFQRELYCDLQ-GENIEAFNSASK------TVKCLQLANGAVYYDEEKHWKEV---H 52 Y + + ++ N + EE E Sbjct: 731 MYRSLVEYGVLPVDPDSKEGRAGRLKMKGFNNIVKQLQKICNHPYLFKEEWDINEDLIRS 790 Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCT 100 K ++ I+ K + +++ + +++ F ++ Sbjct: 791 SGKFDTMDQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTYLRLDGSTKPEERAHL 850 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + EWN P + + G G+NLQ + ++ F W+ + ++ R + Sbjct: 851 VVEWNRPDSPFWIFVLSTHAGGLGMNLQT-ADTVIIFDSDWNPQ-----MDLQAQDRCHR 904 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G AV VY LI+ N+I+E +L+R K I ++ A Sbjct: 905 IGQTNAVNVYRLISANSIEEKILERATDKLEIDAKIIQA 943 >gi|293630862|gb|ACU12857.2| Mot1 [Brachypodium distachyon] Length = 2067 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 84/261 (32%), Gaps = 67/261 (25%) Query: 1 MKQYHKFQRELYCDLQGENIEA-------------FNSASKTVKCLQLANGAVYYDEEKH 47 +K Y KF + + A + L+L + V E Sbjct: 1735 LKLYDKFSSSNAKEEISTIVTANESEQSTSQPKATRHVFQALQYLLKLCSHPVLVIGESP 1794 Query: 48 WKEV-------------------HDEKIKALEVIIEKAN---------------AAPIIV 73 + H K+ AL+ I+ + +++ Sbjct: 1795 PDYLVDHLKDIRMGSGDDLHDLHHSPKLVALQEILHECGIGSEISSPDASAAVGQHRVLI 1854 Query: 74 AYHFNSDLARLQKAFPQGRTL-------------DKDPCTIQEWN-EGKIPLLFAHPASC 119 + L ++K Q +K ++ +N + I +L Sbjct: 1855 FAQHKAFLDIIEKDLFQSHMRSVTYLRLDGSVQTEKRFEIVKSFNSDPTIDVLLLTTHVG 1914 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + LVF W+ M + + R + G K+ V V+ LI + T++E Sbjct: 1915 GLGLNLTS-ADTLVFMEHDWNP-----MKDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEK 1968 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R K ++ + ++NA Sbjct: 1969 VMSLQRFKVSVANAVINAENA 1989 >gi|281345379|gb|EFB20963.1| hypothetical protein PANDA_019836 [Ailuropoda melanoleuca] Length = 834 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 25/214 (11%), Positives = 72/214 (33%), Gaps = 25/214 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 246 KYYKAILMKDLDAFENEMAKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASG 305 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 306 KLYLLDKLLAFLYSRGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 365 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + + + G G+NL + ++F ++ + + R + G Sbjct: 366 NFGQQPVFIFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 419 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++V V LI ++T++E+V ++ +K + + ++ Sbjct: 420 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNTIIE 453 >gi|261198639|ref|XP_002625721.1| SNF2 family helicase/ATPase PasG [Ajellomyces dermatitidis SLH14081] gi|239594873|gb|EEQ77454.1| SNF2 family helicase/ATPase PasG [Ajellomyces dermatitidis SLH14081] Length = 862 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 75/220 (34%), Gaps = 28/220 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------DEKIK 57 K ++ L + I + + ++ N + H K+ Sbjct: 559 KIEKTKTAQLAKKEIASKKLQNPVMQARLACNSPHNFYWPWDDDPSHIDESLITSSGKML 618 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEW 104 L+ +I + I++ F + L + IQ + Sbjct: 619 LLDGLIPCLMSKGHKILIFSQFKTQLDLLQDYATYLRGWNCCRIDGAVSQVDRQAQIQAF 678 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N + + G G+NL + ++ F W+ ++ + R + G + Sbjct: 679 NTNQDYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTK 732 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 733 PVIVYRLATRGTVEQTLLEKADSKRRLEKLVIQKGKFKSL 772 >gi|242791140|ref|XP_002481699.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|242791145|ref|XP_002481700.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218718287|gb|EED17707.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218718288|gb|EED17708.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1118 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 76/224 (33%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 426 VKWYQKILEKDIDAVNGAAGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 485 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ I+ K + +++ + L L+ + Sbjct: 486 IDNSGKMVVLDKILNRMKKQGSRVLIFSQMSRVLDILEDYCVFREHKYCRIDGSTAHEDR 545 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I+V F W+ + + + R Sbjct: 546 IAAIDEYNREGSDKFIFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQA-----DLQAMDR 599 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + ++ I+E VL+R K + L++ + Sbjct: 600 AHRIGQKKQVVVFRFVTEHAIEEKVLERAAQKLRLDQLVIQQGR 643 >gi|194210904|ref|XP_001497220.2| PREDICTED: similar to Chromodomain helicase DNA binding protein 1-like isoform 1 [Equus caballus] Length = 1006 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 402 KYYKAILMKDLDAFENETAKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASG 461 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + + +++ L LQ ++ I+ Sbjct: 462 KLHLLDKLLAFLYSRSHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 521 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 522 NFGQKPIFIFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 575 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + + ++ Sbjct: 576 KSVKVIRLIGRDTVEEIVCRKAASKLQLTNTIIEG 610 >gi|308501284|ref|XP_003112827.1| CRE-LET-418 protein [Caenorhabditis remanei] gi|308267395|gb|EFP11348.1| CRE-LET-418 protein [Caenorhabditis remanei] Length = 1884 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 25/224 (11%), Positives = 65/224 (29%), Gaps = 34/224 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEKH 47 K Y + L + + ++ + N + E Sbjct: 856 KWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKASLEAPKEKNGMYEGT 915 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + K L+ ++ K +++ L ++ + Sbjct: 916 ALIKNSGKFALLQKMLRKLKDGGHRVLIFSQMTMMLDIMEDFCDVEGYKYERIDGSITGQ 975 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + + G G+NL + ++ + W+ + Sbjct: 976 MRQDAIDRYNAPGAQQFIFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1029 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K V +Y + + +++E + + K + L++ A Sbjct: 1030 SRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLNHLVVRA 1073 >gi|296236368|ref|XP_002807959.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription activator SNF2L1-like [Callithrix jacchus] Length = 1080 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 82/242 (33%), Gaps = 52/242 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 413 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 472 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 473 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 532 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 533 DGQTPHEEREDKFLEVEFRGQREAIEAFNAPNSSKFIFMLSTRAGGLGINL-ASADVVIL 591 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 592 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 646 Query: 195 LN 196 + Sbjct: 647 IQ 648 >gi|6321275|ref|NP_011352.1| Rad54p [Saccharomyces cerevisiae S288c] gi|417577|sp|P32863|RAD54_YEAST RecName: Full=DNA repair and recombination protein RAD54 gi|172343|gb|AAA34949.1| recombination and repair protein [Saccharomyces cerevisiae] gi|728692|emb|CAA88534.1| RAD54 [Saccharomyces cerevisiae] gi|1322760|emb|CAA96875.1| RAD54 [Saccharomyces cerevisiae] gi|285812049|tpg|DAA07949.1| TPA: Rad54p [Saccharomyces cerevisiae S288c] Length = 898 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 82/241 (34%), Gaps = 44/241 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------------- 45 + Y+K + + + +L N + E Sbjct: 581 ELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLLNFEDEFDDEDDLELPDDYN 640 Query: 46 ------KHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR---- 92 + + + K LE + K + I++ ++ L ++K Sbjct: 641 MPGSKARDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAV 700 Query: 93 ------TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +++K + +N+ + + + G G+NL G N L+ W+ Sbjct: 701 RLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAAD 759 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 Q + R + G K+ F+Y I+ TI+E + QR K ++ +++A K++ Sbjct: 760 Q-----QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDA-KEDVER 813 Query: 205 V 205 + Sbjct: 814 L 814 >gi|281211035|gb|EFA85201.1| myb domain-containing protein [Polysphondylium pallidum PN500] Length = 2415 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 19/173 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 Y +K + K++AL ++ K N ++ + L + Sbjct: 1248 SLYFPDKKLIQYDCGKLQALAKLLRNLKTNGHRALIFTQWTRMLDVFESFLNLHGYTYLR 1307 Query: 96 --------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + +N + KI L S G GLNL G + ++F+ W+ Sbjct: 1308 LDGSTKVDRRQYLAERFNRDNKIFLFILSTRSGGLGLNLT-GADTVIFYDTDWNPS---- 1362 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ R + G R V +Y LI Q+TI+E +L++ K + D+++ + Sbjct: 1363 -MDAQAQDRCHRIGQTREVNIYRLITQHTIEENILRKSNQKRQLDDVVIQGGE 1414 >gi|5911978|emb|CAB55959.1| hypothetical protein [Homo sapiens] Length = 1388 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 392 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 451 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 452 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 511 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 512 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 565 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 566 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 607 >gi|71008587|ref|XP_758230.1| hypothetical protein UM02083.1 [Ustilago maydis 521] gi|46097848|gb|EAK83081.1| hypothetical protein UM02083.1 [Ustilago maydis 521] Length = 870 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 40/211 (18%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKE----------------------VHDEKIKA 58 +L N D + ++ Sbjct: 576 TGSQPLKAIGILKKLCNHPDLLDLPNDLEGSEEYFPEAYTPRDRRYVNPELSGKMMVLQR 635 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGK 108 I + I++ ++ L ++ T++K + +N+ + Sbjct: 636 FLETIRATSNDKIVLISNYTQTLDVFERMCRANRWGMFRLDGTMTINKRQKLVDRFNDPE 695 Query: 109 IP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL G N LV F W+ Q + R + G K++ F Sbjct: 696 GKEFIFLLSSKAGGCGLNL-IGANRLVLFDPDWNPASDQ-----QALARVWRDGQKKSCF 749 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VY IA +I+E +LQR K ++ +++ Sbjct: 750 VYRFIATGSIEEKILQRQSHKQSLSSCVVDE 780 >gi|151943650|gb|EDN61960.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789] Length = 898 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 82/241 (34%), Gaps = 44/241 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------------- 45 + Y+K + + + +L N + E Sbjct: 581 ELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLLNFEDEFDDEDDLELPDDYN 640 Query: 46 ------KHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR---- 92 + + + K LE + K + I++ ++ L ++K Sbjct: 641 MPGSKARDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAV 700 Query: 93 ------TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +++K + +N+ + + + G G+NL G N L+ W+ Sbjct: 701 RLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAAD 759 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 Q + R + G K+ F+Y I+ TI+E + QR K ++ +++A K++ Sbjct: 760 Q-----QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDA-KEDVER 813 Query: 205 V 205 + Sbjct: 814 L 814 >gi|309358145|emb|CAP34504.2| CBR-ISW-1 protein [Caenorhabditis briggsae AF16] Length = 1019 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ N A K + + N + Sbjct: 366 VKVYVGLSKMQREWYTKILLKDIDVINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEPG 425 Query: 43 --DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 + K+ L+ ++ + + +++ F+ L L+ Sbjct: 426 PPYTTDQHLVDNCGKMVVLDKLLSRLQEQGSRVLIFSQFSRMLDLLEDYCWWRKYEYCRL 485 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I+ +N + + G G+NL ++++ + W+ + Sbjct: 486 DGSTAHVDRTSAIEAYNAPDSKKFIFMLTTRAGGLGINL-ATADVVIIYDSDWNPQS--- 541 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + R + G K+ V V+ LI +NT+D+ ++++ K + ++++ + Sbjct: 542 --DLQAMDRAHRIGQKKQVKVFRLITENTVDDRIIEKAEAKLRLDNIVIQQGR 592 >gi|195342153|ref|XP_002037666.1| GM18177 [Drosophila sechellia] gi|194132516|gb|EDW54084.1| GM18177 [Drosophila sechellia] Length = 717 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 42/224 (18%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------------- 52 R D + + + + ++ + E+ +E Sbjct: 367 VRRSLADCNEK--ASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPK 424 Query: 53 ------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K L+ ++ +++ ++ L ++ + Sbjct: 425 DLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMS 484 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIG 152 + K + +N+ + +S G L G N L F W+ + Sbjct: 485 IKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DEQA 539 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 540 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 583 >gi|67609421|ref|XP_666977.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Cryptosporidium hominis TU502] gi|54658055|gb|EAL36743.1| chromodomain-helicase-DNA-binding protein, CHD-1-related [Cryptosporidium hominis] Length = 2025 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 72/225 (32%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEK-------------HW 48 Y Y +L S ++ ++ N + H Sbjct: 805 MYKSILTRNYDELSKTTGGTKTSLQNICMELKKVCNHPFLIHRPELDPSQGITIASIQHQ 864 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + + +++ L + + + Sbjct: 865 LVYGCGKLCLLDKLLSRLREKGSRVLIFSQMVRMLNIISEFLVLRGFRHQRLDGTMGKEL 924 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + ++ + W+ + + Sbjct: 925 RKKAMDHFNSPNSDDFCFLLSTKAGGLGINLTT-ADTVIIYDSDWNPQN-----DLQAEA 978 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V +Y L+ +++I+E +L+R +TK + L++ L Sbjct: 979 RAHRIGQKKQVQIYRLVTKDSIEENILERAKTKMVLDTLVVQGLN 1023 >gi|195539537|ref|NP_001124238.1| DNA repair and recombination protein RAD54-like [Bos taurus] gi|119935983|gb|ABM06051.1| RAD54-like protein [Bos taurus] gi|296488837|gb|DAA30950.1| RAD54-like [Bos taurus] Length = 749 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 85/235 (36%), Gaps = 45/235 (19%) Query: 1 MKQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 ++ Y +F R+ +L+ + + +S T +L N ++ +E Sbjct: 422 IELYKRFLRQAKPAEELREGKMSVSSLSSITS-LKKLCNHPALIYDKCVEEEDGFEGTLD 480 Query: 53 ---------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ---- 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 481 IFPPGYNSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYL 540 Query: 91 ------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 541 YVRLDGTMSIKKRAKVVERFNNPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPA 599 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 600 N-----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 649 >gi|37699520|gb|AAB95091.3| 89B helicase [Drosophila melanogaster] Length = 1924 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 77/252 (30%), Gaps = 58/252 (23%) Query: 1 MKQYHKF----QRELYCDLQGENIEAF---------NSASKTVKCLQLANGAVYYDEEKH 47 ++ Y F ++ L + + + + N + Sbjct: 1609 LRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSE 1668 Query: 48 WKEV----------------HDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLA 82 H K+ AL+ ++ + ++ + L Sbjct: 1669 ELTKVTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLD 1728 Query: 83 RLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 +++ + + +N + I +L G GLNL G Sbjct: 1729 IVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-G 1787 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ M + + R + G K+ V VY LI +N+++E ++ + K Sbjct: 1788 ADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKI 1842 Query: 189 TIQDLLLNALKK 200 + +++A Sbjct: 1843 LTANTVVSAENA 1854 >gi|312371646|gb|EFR19778.1| hypothetical protein AND_21824 [Anopheles darlingi] Length = 2134 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 75/255 (29%), Gaps = 60/255 (23%) Query: 2 KQYHKFQR---------ELYCDLQGENI----EAFNSASKTVKCLQLANGAVYYDEEKHW 48 + Y F R E + G+ + + + + N H Sbjct: 1769 RLYEDFSRMHLHSSDIRECLEHIDGQQMGPANKKTHVFQALRYLQNVCNHPKLVLTPSHP 1828 Query: 49 KEV-----------------HDEKIKALEVIIEKA----------NAAPIIVAYHFNSDL 81 + H K+ L+ ++ N ++ + L Sbjct: 1829 EYKDIVGEFTRNGASMDDIEHSAKLPVLKQLLLDCGIGTNEDVSVNQHRALIFCQLKAML 1888 Query: 82 ARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 L+ + ++N + I +L G GLNL Sbjct: 1889 DILENDLLKKHLPAVSYLRLDGSVPPSTRHHIVTKFNGDPSIDVLLLTTQVGGLGLNLT- 1947 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + ++F W+ M + + R + G K+ V VY LI + +++E ++ + K Sbjct: 1948 GADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRKSLEEKIMGLQKFK 2002 Query: 188 STIQDLLLNALKKET 202 + +++ Sbjct: 2003 LQTANTVVSDENASM 2017 >gi|195380477|ref|XP_002048997.1| GJ21347 [Drosophila virilis] gi|194143794|gb|EDW60190.1| GJ21347 [Drosophila virilis] Length = 1021 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QR+ Y + ++I+ N A K ++ + N + Sbjct: 366 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 426 LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + + G G+NL ++++ + W+ + ++ + Sbjct: 486 RNRQIQEYNMENSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 539 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 540 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|328856768|gb|EGG05888.1| hypothetical protein MELLADRAFT_36442 [Melampsora larici-populina 98AG31] Length = 878 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 65/171 (38%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 + + K+ L+ ++++ +++ + + +++ Sbjct: 645 FMEVPQLEKLMLDSGKLARLDSLLQELKTGGHRVLIYFQMTRMIDLMEEYLSFRHYRYLR 704 Query: 96 ---------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + +I + + G G+NL + ++F+ W+ Q Sbjct: 705 LDGSSTISERRDMVMDWQTRPEIFIFLLSTRAGGLGINLTA-ADTVIFYDCDWNPSNDQ- 762 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G KR V VY LI TIDE +L+ RTK T+QD ++ + Sbjct: 763 ----QAMDRAHRLGQKRQVTVYRLITSGTIDERILKLARTKKTVQDAVVGS 809 >gi|194756516|ref|XP_001960523.1| GF13400 [Drosophila ananassae] gi|190621821|gb|EDV37345.1| GF13400 [Drosophila ananassae] Length = 1027 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QR+ Y + ++I+ N A K ++ + N + Sbjct: 366 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 426 LIYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRGYNYCRLDGQTPHED 485 Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + + G G+NL ++++ + W+ + ++ + Sbjct: 486 RNRQIQEYNMDNSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 539 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 540 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|190407107|gb|EDV10374.1| DNA repair and recombination protein RAD54 [Saccharomyces cerevisiae RM11-1a] Length = 898 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 82/241 (34%), Gaps = 44/241 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------------- 45 + Y+K + + + +L N + E Sbjct: 581 ELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLLNFEDEFDDEDDLELPDDYN 640 Query: 46 ------KHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR---- 92 + + + K LE + K + I++ ++ L ++K Sbjct: 641 MPGSKARDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAV 700 Query: 93 ------TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +++K + +N+ + + + G G+NL G N L+ W+ Sbjct: 701 RLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAAD 759 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 Q + R + G K+ F+Y I+ TI+E + QR K ++ +++A K++ Sbjct: 760 Q-----QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDA-KEDVER 813 Query: 205 V 205 + Sbjct: 814 L 814 >gi|159487869|ref|XP_001701945.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158281164|gb|EDP06920.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 3251 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 68/180 (37%), Gaps = 22/180 (12%) Query: 38 GAVYYDEEKHWKE--VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----- 88 ++ ++ + K+K L+ ++ K N + +++ + + L L+ Sbjct: 861 HHKLLEKYILPQDSILSSAKVKQLDELLPKLKENGSRVLLFSQWTTVLDLLEWYLSLRGY 920 Query: 89 -----PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 +D+ + +N P + + G GLNL G + ++ + ++ Sbjct: 921 TYCRLDGSTNVDERLKLVDAFNASDSPYFVFLLSTRAGGQGLNLT-GADTVILHDVDFNP 979 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + I+R R + G R V VY LI + T+D + K + +L + E Sbjct: 980 Q-----IDRQAEDRAHRLGQTRTVTVYRLITRGTVDSNIQAIAERKLALDHAVLGDVAVE 1034 >gi|119496623|ref|XP_001265085.1| TBP associated factor (Mot1), putative [Neosartorya fischeri NRRL 181] gi|119413247|gb|EAW23188.1| TBP associated factor (Mot1), putative [Neosartorya fischeri NRRL 181] Length = 1920 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 77/249 (30%), Gaps = 60/249 (24%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------ 50 K + F ++ LQ + + + +L N +E H + Sbjct: 1595 KLFEDFTKKEQKALQDKVGSTEKSDKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQQY 1654 Query: 51 -----------VHDEKIKALEVIIEKA------------------NAAPIIVAYHFNSDL 81 H K+ AL ++ + ++ L Sbjct: 1655 LAAKHSNIRDVAHAPKLSALRDLLIDCGIGVDSPSEGDLSGASYVSPHRALIFCQMKEML 1714 Query: 82 ARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 +Q K + +N + +L + G GLNL Sbjct: 1715 DIVQSEVLKKLLPSVQFLRLDGSVEATKRQDIVNRFNTDPSYDVLLLTTSVGGLGLNLT- 1773 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R K Sbjct: 1774 GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFK 1828 Query: 188 STIQDLLLN 196 + ++N Sbjct: 1829 IDVASTVVN 1837 >gi|115654057|ref|XP_001202164.1| PREDICTED: similar to putative recombination factor GdRad54, partial [Strongylocentrotus purpuratus] gi|115679178|ref|XP_790055.2| PREDICTED: similar to putative recombination factor GdRad54, partial [Strongylocentrotus purpuratus] Length = 335 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 82/230 (35%), Gaps = 42/230 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE------------------ 44 Y ++ + + + + + ++ S +L N + Sbjct: 15 IYQQYVKAMMKECRMKTQGKVSTLSAITHLKKLCNHPALVYDKCVSSKDGFHDMLQNFPP 74 Query: 45 ---EKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFP--------- 89 K + K++ L+ I+ + +++ +++ ++ L ++ Sbjct: 75 GYNNKQLRPELSGKMQVLDYILAITKTSSSDKVVLVSNYTQTLDVFEQLCRLRGYLFVRL 134 Query: 90 -QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ K + +N P + + G GLNL G N LV F W+ Sbjct: 135 DGSMSIKKRAKVVDSFNNPNSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN--- 190 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ F+Y L+A TI+E + QR K + +++ Sbjct: 191 --DDQAMARVWRDGQKKRCFIYRLLATGTIEEKIFQRQAHKKALSSCVVD 238 >gi|319441078|ref|ZP_07990234.1| putative DNA/RNA helicase [Corynebacterium variabile DSM 44702] Length = 1050 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 61/193 (31%), Gaps = 24/193 (12%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVIIEK--ANAAPIIVAYHFN 78 + ++ N ++ + K++ L I+ + ++V F Sbjct: 794 VLTALTHFKEICNHPAHFSGDGSGIRKDGRHRSGKVERLYRIVAEALEQDRRVLVFTQFP 853 Query: 79 SD-----------LARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQ 126 S G + + ++ + G G+ L Sbjct: 854 SFGRMLAPDMEEVFGIEVPMLHGGLNRKARVDLVNRFQSENGPKVMILSTRAGGTGITLT 913 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++++ WW+ +E R + G + V V+ LIA T+DE + L Sbjct: 914 R-ASVVIHIDRWWNPA-----VEDQATDRAYRIGQGQDVRVHKLIAVGTLDERINDILGA 967 Query: 187 KSTIQDLLLNALK 199 K + +++A + Sbjct: 968 KRDLAGDVVSAGE 980 >gi|256272233|gb|EEU07224.1| Rad54p [Saccharomyces cerevisiae JAY291] gi|259146347|emb|CAY79604.1| Rad54p [Saccharomyces cerevisiae EC1118] Length = 898 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 82/241 (34%), Gaps = 44/241 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------------- 45 + Y+K + + + +L N + E Sbjct: 581 ELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLLNFEDEFDDEDDLELPDDYN 640 Query: 46 ------KHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR---- 92 + + + K LE + K + I++ ++ L ++K Sbjct: 641 MPGSKARDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAV 700 Query: 93 ------TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +++K + +N+ + + + G G+NL G N L+ W+ Sbjct: 701 RLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAAD 759 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 Q + R + G K+ F+Y I+ TI+E + QR K ++ +++A K++ Sbjct: 760 Q-----QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDA-KEDVER 813 Query: 205 V 205 + Sbjct: 814 L 814 >gi|113678140|ref|NP_001038323.1| chromodomain helicase DNA binding protein 4 [Danio rerio] gi|94732824|emb|CAK04973.1| novel protein similar to vertebrate chromodomain helicase DNA binding protein 4 (CHD4) [Danio rerio] Length = 1929 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 65/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEKH 47 K Y + L + + + + N + E Sbjct: 969 KYYKFILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPAAAMEAAKMPNGMYEGG 1028 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 1029 GLTKSSGKLLLLQKMLRKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGITGG 1088 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N P + + G G+NL + +V + W+ + Sbjct: 1089 MRQEAIDRFNAPGAPQFVFLLSTRAGGLGINL-ATADTVVIYDSDWNP-----HNDIQAF 1142 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1143 SRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKMMLTHLVV 1184 >gi|268573820|ref|XP_002641887.1| C. briggsae CBR-ISW-1 protein [Caenorhabditis briggsae] Length = 1012 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ N A K + + N + Sbjct: 366 VKVYVGLSKMQREWYTKILLKDIDVINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEPG 425 Query: 43 --DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 + K+ L+ ++ + + +++ F+ L L+ Sbjct: 426 PPYTTDQHLVDNCGKMVVLDKLLSRLQEQGSRVLIFSQFSRMLDLLEDYCWWRKYEYCRL 485 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I+ +N + + G G+NL ++++ + W+ + Sbjct: 486 DGSTAHVDRTSAIEAYNAPDSKKFIFMLTTRAGGLGINL-ATADVVIIYDSDWNPQS--- 541 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + R + G K+ V V+ LI +NT+D+ ++++ K + ++++ + Sbjct: 542 --DLQAMDRAHRIGQKKQVKVFRLITENTVDDRIIEKAEAKLRLDNIVIQQGR 592 >gi|310795007|gb|EFQ30468.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 852 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + + Sbjct: 558 LKAINILKKLCNHPDLLNIADDLPGSENCYPDDYVPKEARGRDRDIKPWYSGKMQVLDRM 617 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K ++K + ++N Sbjct: 618 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNNPDG 677 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 678 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 731 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 732 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 763 >gi|124802575|ref|XP_001347516.1| Chromodomain-helicase-DNA-binding protein 1 homolog, putative [Plasmodium falciparum 3D7] gi|23495097|gb|AAN35429.1| Chromodomain-helicase-DNA-binding protein 1 homolog, putative [Plasmodium falciparum 3D7] Length = 3328 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 77/222 (34%), Gaps = 27/222 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEVH------D 53 ++ Y + Y L + A NS ++ ++ N E E Sbjct: 1553 IEYYKNILTKNYEQLAKASGGAKNSLQNICMELKKVCNHPFLCAEPLDKDEYKERLVYSS 1612 Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTI 101 KI LE ++ + +++ L + T + + Sbjct: 1613 GKICLLEKLLIRLKERGNRVLIFSQMVKMLNILSEYLTLRGFKHQRLDGTMTKEMRKKAM 1672 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G G+NL + ++ + W+ + + R + Sbjct: 1673 NHFNSKNSDDFVFLLSTKAGGLGINLTS-ADTVIIYDSDWNPQN-----DLQAGARAHRI 1726 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V +Y L+ +++I++ +L+R + K + L++ L K+ Sbjct: 1727 GQTKTVQIYRLVTKDSIEQTILERAKVKMVLDTLVVQGLNKK 1768 >gi|73946653|ref|XP_860507.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 24 [Canis familiaris] Length = 1545 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 75/221 (33%), Gaps = 33/221 (14%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N Y + + +H Sbjct: 961 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHP-YMFQHIEMEGIHELLY 1019 Query: 53 --DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 K + L+ I+ K A +++ S + ++ F + Sbjct: 1020 RASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRA 1079 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++++NE + + G GLNLQ + +V F W+ + + R Sbjct: 1080 ALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQAQDRA 1133 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V L N+++E +L + K + ++ A Sbjct: 1134 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1174 >gi|325114960|emb|CBZ50516.1| snf2 family N-terminal domain-containing protein, related [Neospora caninum Liverpool] Length = 1630 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 80/213 (37%), Gaps = 24/213 (11%) Query: 3 QYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---HDEKIKA 58 Y + Q + + N+ + ++ ++AN + +E E K + Sbjct: 1005 VYKQIQEKGLRTVDQVGNVTKRGFQNTLMQLRKIANHPYLFVDEYLLNEDLVRVAGKFEC 1064 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNE 106 L+ ++ K +++ L + + L + + E+N Sbjct: 1065 LDRMLPKLLHFKHKVLIFSQMTQVLDLMAEYMHLRGYKFARLDGSVGLTERKERMAEFNN 1124 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++ + + G GLNLQ + ++ F ++ + + + R + G + Sbjct: 1125 AEVDTMIFMLSTRAGGLGLNLQA-ADTVILFDSDFNPHQ-----DLQAMCRAHRLGQTKQ 1178 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L+ + ++E++L++ K I +++ A Sbjct: 1179 VKVFRLVTISGVEEIILEKANRKLNIDQMVIQA 1211 >gi|320589784|gb|EFX02240.1| snf2 family helicase ATPase [Grosmannia clavigera kw1407] Length = 1885 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 58/159 (36%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ K +++ + + +++ + Sbjct: 1602 DSGKLAKLDDLLFKLKEGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1661 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + +VF+ W+ I+ + R + Sbjct: 1662 TVHDFQTRPEIFIFLLSTRAGGLGINLTS-ADTVVFYDSDWNPT-----IDSQAMDRAHR 1715 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY +I + TI+E + +R K +Q +++ Sbjct: 1716 LGQTRQVTVYRMITRGTIEERIRKRALQKEEVQRVVIQG 1754 >gi|170077237|ref|YP_001733875.1| SNF2 helicase, putative [Synechococcus sp. PCC 7002] gi|169884906|gb|ACA98619.1| SNF2 helicase, putative [Synechococcus sp. PCC 7002] Length = 1002 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 67/214 (31%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD---EEKHWKEVHDEKIK 57 Y K E +++ + ++ QL N V + K+ Sbjct: 767 LYQKLVDESLAEIENTDGIQRRGLILTLLLRLKQLCNHPVLLQSKPKLGKNFAPRSGKLL 826 Query: 58 ALEVIIEKAN--AAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEW 104 LE ++E+ ++ F+ L + + + Sbjct: 827 RLEEMLEELISEGDRALIFTQFSEWGKLLQPYLQERLGQDVLFLYGATRRETRQQMCDRF 886 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 P+ + G GLNL N + WW+ +E R + G K Sbjct: 887 QNDPNGPPIFILSLKAGGTGLNLTR-ANHVFHVDRWWNPA-----VEDQATDRAFRIGQK 940 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V V+ ++ T++E + + +K + + ++ Sbjct: 941 QNVQVHKFVSTGTLEEKISAMIASKKELAEQTVD 974 >gi|224099763|ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222851428|gb|EEE88975.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1131 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 81/213 (38%), Gaps = 25/213 (11%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKA 58 Y + LQ + ++ + + T++ + N + + + K + Sbjct: 672 YQQVTEMGRVGLQNGSGKSKSLQNLTMQLRKCCNHPYLFVGDYNMWRKDEIMRASGKFEL 731 Query: 59 LEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNE 106 L+ ++ K + +++ + L+ + ++++N Sbjct: 732 LDRLLPKLHATDHRVLLFSQMTRLMDILEIYLQLHDYKYLRLDGSTKTEERGTLLKKFNA 791 Query: 107 GKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + G GLNLQ + ++ F W+ + +++ R + G K+ Sbjct: 792 PDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQKKE 845 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +++E++L+R + K I ++ A Sbjct: 846 VRVFVLVSVGSVEEVILERAKQKKGIDAKVIQA 878 >gi|320582398|gb|EFW96615.1| DNA helicase [Pichia angusta DL-1] Length = 1219 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 74/226 (32%), Gaps = 35/226 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA-----SKTVKCLQLANGAVYYDEEKHWKEVH----- 52 Y + + A + +K ++ ++ N ++E + Sbjct: 700 LYKQMLNHNALFVGVGTQGATKTGLRGLNNKIMQLRKVCNHPYVFEEVEDIVNPSRLTTD 759 Query: 53 -----DEKIKALEVIIEKA--NAAPIIVAYHFNS----------DLARLQKAFPQGRTLD 95 K + L+ ++ K + +++ + D Sbjct: 760 LIWRSSGKFELLDRVLPKFKASGHKVLIFFQMTQVMDIMEDYLRFRDMKYMRLDGSTKAD 819 Query: 96 KDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++++N + G GLNLQ + ++ F W+ + + Sbjct: 820 DRQDMLKDFNAPDSEYFCFLLSTRAGGLGLNLQT-ADTVIIFDTDWNPHQ-----DLQAQ 873 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI +++++E++L+R K I ++ A K Sbjct: 874 DRAHRIGQKNEVRILRLITEDSVEEVILERAHQKLDIDGKVIQAGK 919 >gi|297666624|ref|XP_002811619.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Pongo abelii] Length = 1048 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 63/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYH-KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y R + + + + N + + Sbjct: 543 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 602 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 603 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 662 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 663 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 716 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 717 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 758 >gi|149745541|ref|XP_001500568.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Equus caballus] Length = 1057 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 416 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 475 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 476 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 535 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 536 DGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSKFIFMLSTRAGGLGINL-ASADVVIL 594 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 595 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 649 Query: 195 LNALK 199 + + Sbjct: 650 IQQGR 654 >gi|114631883|ref|XP_001151005.1| PREDICTED: helicase, lymphoid-specific isoform 6 [Pan troglodytes] Length = 882 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 65/189 (34%), Gaps = 27/189 (14%) Query: 29 TVKCLQLANGAVY--------YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 + + N + + K L+ ++ + +++ Sbjct: 610 MMLLRKCCNHPYLIDFVEPGPFCSIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMT 669 Query: 79 SDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 S L L + + + +N + ++ + + G G+NL Sbjct: 670 SMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTA 729 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ + W+ + + R + G + V VY L+ NTID+ +++R K Sbjct: 730 -ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAK 783 Query: 188 STIQDLLLN 196 ++ L+++ Sbjct: 784 RKLEKLIIH 792 >gi|119603203|gb|EAW82797.1| chromodomain helicase DNA binding protein 9, isoform CRA_e [Homo sapiens] Length = 2823 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1050 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1109 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1110 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1169 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1170 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1226 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1227 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1283 >gi|302897485|ref|XP_003047621.1| hypothetical protein NECHADRAFT_72504 [Nectria haematococca mpVI 77-13-4] gi|256728552|gb|EEU41908.1| hypothetical protein NECHADRAFT_72504 [Nectria haematococca mpVI 77-13-4] Length = 1861 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ K A +++ + + +++ + Sbjct: 1582 DSGKLAKLDDLLFKLKAENHRVLLYFQMTRMIDMMEEYLTYRNYKYCRLDGSTKLEDRRD 1641 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1642 TVHDFQTRPEIFIFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1695 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1696 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVIQG 1734 >gi|73998072|ref|XP_859283.1| PREDICTED: similar to helicase, lymphoid-specific isoform 4 [Canis familiaris] Length = 707 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 63/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 433 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKARGHKVLLFSQ 492 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + + +N + + + + G G+NL Sbjct: 493 MTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINL 552 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 553 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 606 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 607 AKRKLEKLIIH 617 >gi|114631887|ref|XP_001151463.1| PREDICTED: helicase, lymphoid-specific isoform 13 [Pan troglodytes] Length = 779 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 466 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 525 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 526 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 585 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 586 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 639 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 640 AKRKLEKLIIH 650 >gi|297816734|ref|XP_002876250.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297322088|gb|EFH52509.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 2043 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 85/271 (31%), Gaps = 70/271 (25%) Query: 1 MKQYHKFQ----RELYCDLQGENIEA-------------FNSASKTVKCLQLANGAVYYD 43 +K Y +F ++ + + A + L+L + + Sbjct: 1701 LKLYEQFSGSGAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVL 1760 Query: 44 EEKHWKEV----------------------HDEKIKALEVIIEKA--------------- 66 +K + V H K+ AL+ I+E+ Sbjct: 1761 GDKVTEPVASDLSAMINGCSDIITELHKVQHSPKLVALQEILEECGIGSDASSSDGTLSV 1820 Query: 67 NAAPIIVAYHF-------------NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 +++ + +K ++ +N + I +L Sbjct: 1821 GQHRVLIFAQHKALLDIIEKDLFQTHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVL 1880 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE-RIGVTRQRQAGFKRAVFVYYLI 171 G GLNL + LVF W+ Q+ + + R + G KR V V+ LI Sbjct: 1881 LLTTHVGGLGLNLTS-ADTLVFMEHDWNPMRDHQVNKLWQAMDRAHRLGQKRVVNVHRLI 1939 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + T++E V+ R K ++ + ++NA Sbjct: 1940 MRGTLEEKVMSLQRFKVSVANTVINAENASM 1970 >gi|194901180|ref|XP_001980130.1| GG16968 [Drosophila erecta] gi|190651833|gb|EDV49088.1| GG16968 [Drosophila erecta] Length = 1925 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 77/252 (30%), Gaps = 58/252 (23%) Query: 1 MKQYHKF----QRELYCDLQGENIEAF---------NSASKTVKCLQLANGAVYYDEEKH 47 ++ Y F ++ L + + + + N + Sbjct: 1610 LRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSE 1669 Query: 48 WKEV----------------HDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLA 82 H K+ AL+ ++ + ++ + L Sbjct: 1670 ELTKVTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLD 1729 Query: 83 RLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 +++ + + +N + I +L G GLNL G Sbjct: 1730 IVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-G 1788 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ M + + R + G K+ V VY LI +N+++E ++ + K Sbjct: 1789 ADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKI 1843 Query: 189 TIQDLLLNALKK 200 + +++A Sbjct: 1844 LTANTVVSAENA 1855 >gi|123474505|ref|XP_001320435.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121903240|gb|EAY08212.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1497 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 70/234 (29%), Gaps = 44/234 (18%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEV-------- 51 K Y E L + A N+ ++ ++ N + + Sbjct: 540 KFYRALLSENASTLLEQITGSAANNLQNIAMQLRKVCNHPYLLKNAEDTEVKERMADPAN 599 Query: 52 ---------------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 K+ + ++ K +++ L + + Sbjct: 600 KGKSRDQIELEGLVESSGKMVFISKLLPRLKEQGHKVLIFSQMVRVLGIISIFLEANQYK 659 Query: 95 DKD----------PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + I +N + + + + G G+NL N ++ + W+ + Sbjct: 660 YERLDGSVNDNDRQAAIDRFNQDPEAFVFLLSTKAGGVGINLTA-ANTVIIYDSDWNPQN 718 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V VY L+ + T +E + +R K + ++L+ Sbjct: 719 -----DIQAEARCHRIGQTQKVKVYRLVTRATYEEKMYERASKKLGLDHVVLDG 767 >gi|115891453|ref|XP_781410.2| PREDICTED: similar to Chromodomain helicase DNA binding protein 1 [Strongylocentrotus purpuratus] gi|115930718|ref|XP_001181304.1| PREDICTED: similar to Chromodomain helicase DNA binding protein 1 [Strongylocentrotus purpuratus] Length = 1335 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 77/220 (35%), Gaps = 29/220 (13%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + + ++ + N ++ + + Sbjct: 731 KQYYKFILTRNFKALCKGLKGNTSSFINIMMELKKCCNHSLLIRPPEDESDPDLKYIIRG 790 Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K+ L+ ++ + +++ L L + + Sbjct: 791 SGKLVLLDKLLTRLQERGHRVLIFSQMVRMLDILSEYLQYRHFQHQRLDGSIRGEIRKQA 850 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + G GLNL + ++ F W+ + + + R + Sbjct: 851 LDHFNAEGSQDFCFLLSTRAGGLGLNL-ASADTVIIFDSDWNPQN-----DIQAMARAHR 904 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G +R V +Y L+ ++TI+E +++R + K + L++ + Sbjct: 905 IGQRRQVNIYRLVTKDTIEEEIIERAKRKMVLDHLVIQRM 944 >gi|311276917|ref|XP_003135410.1| PREDICTED: probable global transcription activator SNF2L1 [Sus scrofa] Length = 1073 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 416 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 475 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 476 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 535 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 536 DGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINL-ASADVVIL 594 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 595 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 649 Query: 195 LNALK 199 + + Sbjct: 650 IQQGR 654 >gi|297492405|ref|XP_002699560.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Bos taurus] gi|296471282|gb|DAA13397.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Bos taurus] Length = 1057 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 416 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 475 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 476 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 535 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 536 DGQTPHEEREDKFLEVELLGQREAIEAFNIPNSSKFIFMLSTRAGGLGINL-ASADVVIL 594 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 595 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 649 Query: 195 LNALK 199 + + Sbjct: 650 IQQGR 654 >gi|158261765|dbj|BAF83060.1| unnamed protein product [Homo sapiens] Length = 1307 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 1083 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 1142 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1143 TYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1201 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1202 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 1251 >gi|67538626|ref|XP_663087.1| hypothetical protein AN5483.2 [Aspergillus nidulans FGSC A4] gi|40743453|gb|EAA62643.1| hypothetical protein AN5483.2 [Aspergillus nidulans FGSC A4] gi|259485068|tpe|CBF81824.1| TPA: ATP-dependent DNA helicase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1184 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 76/210 (36%), Gaps = 34/210 (16%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--- 65 R+ +L+ E + N SK +L + KI+ II Sbjct: 970 RKTLAELKKE--ASKNQESKRKYLRRL-----------EKTWITSAKIEKTMEIIRDIER 1016 Query: 66 -ANAAPIIVAYHFNSDL-----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 N II+ F S L R ++ + D++ + ++ ++ Sbjct: 1017 RDNNEKIIIFSQFTSLLDLLEIPIAREGHRYRRYDGSMKPADRNSAVLDFTDDPSCKVML 1076 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + GLNL N ++ F +W+ +E V R + G R V V+ ++ Sbjct: 1077 VSLKAGNSGLNLVA-ANHVIIFDPFWNP-----YVEEQAVDRAHRIGQLREVHVHRILVP 1130 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETI 203 T+++ +++ K I D L+ + + I Sbjct: 1131 ETVEDRIIELQDKKRAIIDGALDEKESKNI 1160 Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats. Identities = 4/51 (7%), Positives = 13/51 (25%), Gaps = 6/51 (11%) Query: 1 MKQYHKFQRELYCD----LQGENI--EAFNSASKTVKCLQLANGAVYYDEE 45 ++ Y + + L+ + N ++ Q + Sbjct: 748 LELYKALEAKTQLQFNRYLEAGTVGRNYSNILVLLLRLRQACCHPHLITDF 798 >gi|320581375|gb|EFW95596.1| hypothetical protein HPODL_2930 [Pichia angusta DL-1] Length = 687 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 28/213 (13%), Positives = 76/213 (35%), Gaps = 30/213 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKI 56 K Y F + + + + ++ + + + + K+ Sbjct: 406 KLYEHF------EFVRKQVGTKKLMNVMMQLRLVCDSPHLFFYPWNDYADSGLVEQSAKL 459 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQE 103 + L+ ++ + +++ F S L ++ I Sbjct: 460 QLLDQLLPALHKDGHRVLIFTQFTSMLDLIEEFVNNTLGYKSCRIDGSTDQADRKDEIDR 519 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 ++ ++ + + G GLNL + ++ F W+ + ++ + R + G + Sbjct: 520 FSTEEVDVFLLSTRAGGLGLNLTA-ADSVILFDSDWNPQ-----VDLQAMDRVHRIGQTK 573 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY L+ NT++E++L + +K ++ L++ Sbjct: 574 PVSVYRLVIANTVEEIMLAKADSKRRLERLVIQ 606 >gi|281351280|gb|EFB26864.1| hypothetical protein PANDA_007143 [Ailuropoda melanoleuca] Length = 967 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 326 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 385 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 386 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 445 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 446 DGQTPHEEREDKFLEVELLGQREAIEAFNVPNSNKFIFMLSTRAGGLGINL-ASADVVIL 504 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 505 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 559 Query: 195 LNALK 199 + + Sbjct: 560 IQQGR 564 >gi|281361889|ref|NP_732097.2| helicase 89B [Drosophila melanogaster] gi|272477008|gb|AAF55260.3| helicase 89B [Drosophila melanogaster] Length = 1923 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 77/252 (30%), Gaps = 58/252 (23%) Query: 1 MKQYHKF----QRELYCDLQGENIEAF---------NSASKTVKCLQLANGAVYYDEEKH 47 ++ Y F ++ L + + + + N + Sbjct: 1608 LRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSE 1667 Query: 48 WKEV----------------HDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLA 82 H K+ AL+ ++ + ++ + L Sbjct: 1668 ELTKVTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLD 1727 Query: 83 RLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 +++ + + +N + I +L G GLNL G Sbjct: 1728 IVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-G 1786 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ M + + R + G K+ V VY LI +N+++E ++ + K Sbjct: 1787 ADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKI 1841 Query: 189 TIQDLLLNALKK 200 + +++A Sbjct: 1842 LTANTVVSAENA 1853 >gi|156040810|ref|XP_001587391.1| hypothetical protein SS1G_11383 [Sclerotinia sclerotiorum 1980] gi|154695767|gb|EDN95505.1| hypothetical protein SS1G_11383 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1301 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 63/177 (35%), Gaps = 21/177 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQ 85 G Y K+ ++ + I+ F + L Sbjct: 1115 GHKKYMRYLRKNWQSSAKVDKCVELLERFQTEGEKTIIFSQFVTFLDLLQVPIGEKGWKC 1174 Query: 86 KAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + + I+++ N+ ++ + GLNL + ++ +W+ Sbjct: 1175 ERYDGSINAKRRDDAIKQFTNKPDCNIMLISLKAGNAGLNLVA-ASRVIILDPFWNP--- 1230 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALK 199 IE V R + G + V V+ ++ Q+T+++ ++ + K + + L+ A+K Sbjct: 1231 --FIEMQAVDRAHRIGQMKPVQVHRILIQDTVEDRIMALQKQKKELVESALDEGAMK 1285 Score = 40.5 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 3/47 (6%), Positives = 9/47 (19%), Gaps = 6/47 (12%) Query: 4 YHKFQRELYCDLQG----ENI--EAFNSASKTVKCLQLANGAVYYDE 44 Y + + + N ++ Q + Sbjct: 835 YESLRDKTQLQFNKYRKAGTVGKNYSNILVLLLRLRQCCCHPHLIID 881 >gi|224108163|ref|XP_002314744.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222863784|gb|EEF00915.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 752 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 59/158 (37%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K +AL ++ K +++ + S L L+ + Sbjct: 578 SAKCRALAELLPDLKKCGHRVLIFSQWTSMLDILEWTLDVLGVTYRRLDGSTQVTERQAI 637 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N I + G GLNL G + ++ L ++ + I+R R + Sbjct: 638 VDAFNNDTSISACLLSTRAGGQGLNLT-GADTVIIHDLDFNPQ-----IDRQAEDRCHRI 691 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V +Y L+ + T+DE V + + K + +L + Sbjct: 692 GQTKPVTIYRLVTKGTVDENVYEIAKRKLVLDAAVLES 729 >gi|212527854|ref|XP_002144084.1| TBP associated factor (Mot1), putative [Penicillium marneffei ATCC 18224] gi|210073482|gb|EEA27569.1| TBP associated factor (Mot1), putative [Penicillium marneffei ATCC 18224] Length = 1894 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 76/250 (30%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 K + F ++ DLQ + + +L N +E H + Sbjct: 1566 KLFEDFSKKEQKDLQSKMGSTEKSAKEHIFQALQYMRRLCNSPALVIKEGHKQYDDVQKY 1625 Query: 52 ------------HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + +V Sbjct: 1626 LSAKNSHIRDISHAPKLTALRDLLIDCGIGVDPNTEGELDTGASYVSPHRALVFCQMKEM 1685 Query: 81 LAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L K + ++N + +L + G GLNL Sbjct: 1686 LDIVQEDVLKKMLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1745 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1746 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRF 1799 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1800 KIDVASTVVN 1809 >gi|115910490|ref|XP_783941.2| PREDICTED: similar to PASG [Strongylocentrotus purpuratus] gi|115960855|ref|XP_001194026.1| PREDICTED: similar to PASG [Strongylocentrotus purpuratus] Length = 734 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 70/194 (36%), Gaps = 29/194 (14%) Query: 29 TVKCLQLANGAVYYD--------EEKHWKEVHDE--KIKALEVIIE--KANAAPIIVAYH 76 ++ + N + E + +E+ K+ ++ ++ K +++ Sbjct: 456 VMQLRKCCNHPYLLEYPLLETTGEYRVDEELVSSCGKMLVVDKLLPALKERGHKVLIFSQ 515 Query: 77 FNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 F + L L+ + + + + L + G G+NL Sbjct: 516 FTTMLDILEDFCHMRSHQYCRLDGTTSLEDRQERMKEFNSNPDVFLFLLSTRAGGLGINL 575 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V +Y L+ NTID+ +++R Sbjct: 576 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVIIYRLVTANTIDQRIVERAA 629 Query: 186 TKSTIQDLLLNALK 199 K ++ ++++ K Sbjct: 630 AKRKLEKMVIHQGK 643 >gi|312378128|gb|EFR24784.1| hypothetical protein AND_10400 [Anopheles darlingi] Length = 2623 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 70/208 (33%), Gaps = 31/208 (14%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIE 64 +G A + ++ + N A+ + +V+ K+ L+ ++ Sbjct: 834 KGLKGSANTFLNIVIELKKCCNHAMLTRPVEFDAQVNQDDVLQQLLKGSGKLVLLDKLLC 893 Query: 65 --KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKI--P 110 K +++ L L + + + + +N Sbjct: 894 RLKETGHRVLIFSQMVRMLDILAEYLQKRHFSYQRLDGSIKGELRRQALDHFNAEGSTDF 953 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL + ++ F W+ + + R + G K V +Y L Sbjct: 954 CFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQARAHRIGQKNQVNIYRL 1007 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + +++E +++R + K + L++ + Sbjct: 1008 VTARSVEENIVERAKKKMVLDHLVIQRM 1035 >gi|225684006|gb|EEH22290.1| DNA repair and recombination protein RAD54 [Paracoccidioides brasiliensis Pb03] Length = 821 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 67/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + + W + + Sbjct: 523 LKAIGILKKLCNHPDLLNLGADLPGCEQFFPDDYIPIESRGRDRDVRSWYSGKMMVLDRM 582 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L ++ + K + ++N+ + Sbjct: 583 LARIRQDTNDKIVLISNYTQTLDLFERLCRSRQYGCLRLDGSMNVTKRQKLVDKFNDPEG 642 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 643 EEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 696 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 697 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 728 >gi|7022306|dbj|BAA91550.1| unnamed protein product [Homo sapiens] gi|55662168|emb|CAH70224.1| helicase, lymphoid-specific [Homo sapiens] Length = 310 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 1 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 60 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 61 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 120 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 121 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 174 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 175 AKRKLEKLIIH 185 >gi|189515794|ref|XP_697956.3| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Danio rerio] Length = 3094 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 70/244 (28%), Gaps = 50/244 (20%) Query: 2 KQYHKFQRELYCDLQGENI----------EAFNSASKTVKCLQLANGAVY--------YD 43 K Y + + L N + ++ + N + Sbjct: 1260 KYYRAILEKNFAFLSKSGAGGGSGGGGGSNVPNLLNTMMELRKCCNHPYLINGAEEKIME 1319 Query: 44 EEKHWKEVHD------------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP 89 E + + K+ ++ ++ K +++ L L+ Sbjct: 1320 EFRETHPLDQPEFHLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLI 1379 Query: 90 QGRTLDKD----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSL 137 Q R + I ++ + + G G+NL + + F Sbjct: 1380 QRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDS 1438 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + + R + G ++V +Y LI +N+ + + + K + +L + Sbjct: 1439 DWNPQN-----DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS 1493 Query: 198 LKKE 201 + Sbjct: 1494 MSGR 1497 >gi|114558342|ref|XP_513751.2| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform 9 [Pan troglodytes] Length = 684 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 72/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 + Y + + E + + + + + + E Sbjct: 288 RYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASG 347 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 348 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 407 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + I + + G G+NL + ++F ++ + + R + G Sbjct: 408 NFGRQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 461 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 462 KSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEG 496 >gi|66392086|ref|YP_239310.1| possible DNA helicase [Xanthomonas phage Xp15] gi|62529196|gb|AAX84879.1| possible DNA helicase [Xanthomonas phage Xp15] Length = 587 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 17/205 (8%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y K + +L + + I A N+A K +K LQ+A+GAV DE + K + AL Sbjct: 382 KMYEKMKSDLLVEYEAGEITAVNAAVKAMKLLQIASGAVKDDEGRIVKVDASTREDALWE 441 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIPL 111 I E +++ F + + L F +Q++ + + + Sbjct: 442 IFEGTGETKLVIFAAFRATIDHLVGYFQDRNVKVATINGDVPHALRAKHVQDFQDSDLQV 501 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L P S HG+ L I+ ++SL E + Q RI +AG R +Y+LI Sbjct: 502 LIIQPQSSAHGITLTASCTIV-WYSLVPSGEIYVQANGRIT-----RAGQSRKQTIYHLI 555 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + VL L K + LL Sbjct: 556 GCRP-ERHVLDILEGKVSTSQNLLE 579 >gi|20521890|dbj|BAA92573.2| KIAA1335 protein [Homo sapiens] Length = 2041 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 35 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 94 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 95 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 154 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 155 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 211 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 212 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 265 >gi|195550742|ref|XP_002076092.1| GD12001 [Drosophila simulans] gi|194201741|gb|EDX15317.1| GD12001 [Drosophila simulans] Length = 783 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 42/224 (18%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------------- 52 R D + + + + ++ + E+ +E Sbjct: 433 VRRSLADCNEK--ASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPK 490 Query: 53 ------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K L+ ++ +++ ++ L ++ + Sbjct: 491 DLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMS 550 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIG 152 + K + +N+ + +S G L G N L F W+ + Sbjct: 551 IKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DEQA 605 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 606 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 649 >gi|47228067|emb|CAF97696.1| unnamed protein product [Tetraodon nigroviridis] Length = 2331 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 71/234 (30%), Gaps = 43/234 (18%) Query: 2 KQYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------- 51 K Y + L N N + ++ + N + + Sbjct: 1152 KYYRAILERNFSFLSLGANSNSNVPNLLNTMMELRKCCNHPYLINGAEEKIVAELREVYD 1211 Query: 52 -------------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 K+ L+ ++ KA +++ L L+ R L + Sbjct: 1212 PSAPDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRYLYE 1271 Query: 97 D----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I +++ + + G G+NL + V F W+ + Sbjct: 1272 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCVIFDSDWNPQN- 1329 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + R + G +AV VY LI +N+ + +L + K + +L ++ Sbjct: 1330 ----DLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSM 1379 >gi|221488620|gb|EEE26834.1| DNA repair and recombination protein RAD54, putative [Toxoplasma gondii GT1] Length = 872 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 76/237 (32%), Gaps = 48/237 (20%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI----- 62 ++ + +G+ S ++L N + + ++ K + Sbjct: 440 RKMFTAEAEGKGGFTGRVLSSIQGLMKLCNHPSLVKSQAQMLQGFEKCEKYFSELDLEGQ 499 Query: 63 ------------------------IEKANAAPIIVAYHFNSDLARL-QKAFPQGRTLDK- 96 I I++ ++ L + G + + Sbjct: 500 KARSRMVRTEISGKLLLLARLLDVIRTTTNDKIVLISNYTQTLDLFDRMCRDCGYPVMRL 559 Query: 97 --------DPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I ++N+ P + + G G+NL G N LV F W+ Sbjct: 560 DGQTSIKKRHAMITKFNDPMNPHSFVFLLSSKAGGCGVNL-IGANRLVLFDPDWNPAN-- 616 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++ + R + G K++ ++Y + TI+E + QR K + +L++ + + Sbjct: 617 ---DKQALARVWRDGQKKSCYIYRFFSTGTIEEKIYQRQICKDGLSAMLVSDGENQI 670 >gi|114666515|ref|XP_512012.2| PREDICTED: chromodomain helicase DNA binding protein 3 [Pan troglodytes] Length = 1846 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 989 KYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGG 1048 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVA----------YHFNSDLARLQKAFPQGRTLD 95 K+ L+ ++ K +++ Y+F + G T Sbjct: 1049 ALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQVTCALSCLYNFLDYEGYKYERIDGGITGA 1108 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1109 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1162 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1163 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1204 >gi|45198479|ref|NP_985508.1| AFL040Wp [Ashbya gossypii ATCC 10895] gi|44984430|gb|AAS53332.1| AFL040Wp [Ashbya gossypii ATCC 10895] Length = 1086 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 77/223 (34%), Gaps = 31/223 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYYD----------EEKHW 48 K Y + + + G N + + ++ + N +D +E Sbjct: 387 KWYKQILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLV 446 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 K+ + K + + +++ + L L+ + Sbjct: 447 YNSAKLKVLDKLLKKLKEDGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTAHEDRI 506 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+N + + G G+NL +++V + W+ + + + R Sbjct: 507 EAIDEYNAPDSRKFIFLLTTRAGGLGINLTT-ADVVVLYDSDWNPQA-----DLQAMDRA 560 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ L+ N+++E +L+R K + L++ + Sbjct: 561 HRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQGR 603 >gi|15838886|ref|NP_299574.1| hypothetical protein XF2295 [Xylella fastidiosa 9a5c] gi|9107459|gb|AAF85094.1|AE004041_6 phage-related protein [Xylella fastidiosa 9a5c] Length = 470 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 83/140 (59%), Positives = 109/140 (77%), Gaps = 2/140 (1%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y ++E++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQEMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LD+ P T+++WN G IP+LFAHPAS Sbjct: 317 HEIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRVLDQHPDTLRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWW 139 GHGLNLQ GGNIL FF WW Sbjct: 377 GHGLNLQDGGNILAFFGHWW 396 >gi|323349632|gb|EGA83848.1| Isw1p [Saccharomyces cerevisiae Lalvin QA23] Length = 1101 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 77/229 (33%), Gaps = 35/229 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYYD----------EEKHW 48 K Y K + + G N + + ++ + N +D +E Sbjct: 411 KWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLV 470 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDP 98 ++ + K + +++ + + Sbjct: 471 YNAAKLQVLDKLLKKLKEXGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRI 530 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N + + G G+NL +++V + W+ + + + R Sbjct: 531 QAIDDYNAPDSKKFVFLLTTRAGGLGINLTS-ADVVVLYDSDWNPQA-----DLQAMDRA 584 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN----ALKKE 201 + G K+ V V+ L+ N+++E +L+R K + L++ +LKK+ Sbjct: 585 HRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKK 633 >gi|194207506|ref|XP_001915622.1| PREDICTED: similar to RAD54-like protein [Equus caballus] Length = 755 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 82/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y KF R+ +L+ + + +S T +L N ++ +E Sbjct: 422 ELYKKFLRQAKPAEELREGKMSVSSLSSITS-LKKLCNHPALIYDKCVEEEDGFEGALDI 480 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ +++ ++ L +K Sbjct: 481 FPPGYSSKALEPQLSGKMLVLDYILAVTRSRGNDKVVLVSNYTQTLDLFEKLCRARRYLY 540 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 541 VRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 599 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 600 -----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 648 >gi|24666729|ref|NP_649111.1| Chd3 [Drosophila melanogaster] gi|25089877|sp|O16102|CHD3_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein 3; AltName: Full=ATP-dependent helicase Chd3 gi|23093148|gb|AAF49162.2| Chd3 [Drosophila melanogaster] Length = 892 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 70/222 (31%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 K Y + + L + + + + + N + + Sbjct: 520 KFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMS 579 Query: 53 -----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L ++++ A+ +++ L L+ Sbjct: 580 SLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGD 639 Query: 98 --PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N+ + + G G+NL + ++ F W+ + Sbjct: 640 LRQKAIDRFNDPVSEHFVFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDVQAF 693 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G K+ V +Y + N+++E ++Q + K + L++ Sbjct: 694 SRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVV 735 >gi|322494672|emb|CBZ29974.1| putative DNA-dependent ATPase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1098 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 77/225 (34%), Gaps = 39/225 (17%) Query: 8 QRELYCDLQGENIEAFNSA--------SKTVKCLQLANGAVYYDEEKHWKEV-------- 51 QRE Y ++ ++ E N A + + ++ N D + Sbjct: 409 QREWYMNVLAKDAEVLNKAGGSVASLTNAMMSLRKVINHPYLMDGGEEGPPFVTDEKLVR 468 Query: 52 HDEKIKALEVIIEK-----ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K+ L+ ++ + +++ F S L L+ + Sbjct: 469 TSGKMIILDKLLHRLRADVQGKHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSGYD 528 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + + G G+NLQ N ++ + W+ + ++ Sbjct: 529 RDSQMASFNSPSSDYFIFLLSTRAGGLGINLQA-ANHVILYDSDWNPQ-----MDLQAQD 582 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G KR+V VY + T++E + +R K + +++ + Sbjct: 583 RAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQQGR 627 >gi|156379809|ref|XP_001631648.1| predicted protein [Nematostella vectensis] gi|156218692|gb|EDO39585.1| predicted protein [Nematostella vectensis] Length = 824 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 25/221 (11%), Positives = 66/221 (29%), Gaps = 33/221 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKHW 48 K Y + L + + + + ++ + N + E + Sbjct: 516 KYYKWILTRNFEALNTKGAQQVSLLNVMMELKKCCNHPYLFHAAALEAKRTQSGGYEPNS 575 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L +++K +++ L L+ + Sbjct: 576 LTEASGKLMLLVKMLKKLREQGHRVLIFSQMTRMLDLLEDFLEGHGYKYERIDGSVNGAA 635 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + G G+NL + + + W+ + + Sbjct: 636 RQEAIDRFNAPTSQAFCFLLSTRAGGLGINL-ATADTVFIYDSDWNP-----HNDIQAFS 689 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G V +Y + +++++E + Q + K + L++ Sbjct: 690 RAHRIGQNNKVMIYRFVTRSSVEERITQVAKKKMMLTHLVV 730 >gi|242784804|ref|XP_002480466.1| TBP associated factor (Mot1), putative [Talaromyces stipitatus ATCC 10500] gi|218720613|gb|EED20032.1| TBP associated factor (Mot1), putative [Talaromyces stipitatus ATCC 10500] Length = 1894 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 76/250 (30%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 K + F ++ DLQ + + +L N +E H + Sbjct: 1563 KLFEDFSKKEQKDLQSKMGSTEKSAKEHIFQALQYMRRLCNSPALVIKEGHKQYDDVQRW 1622 Query: 52 ------------HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + +V Sbjct: 1623 LHAKNSHIRDIAHAPKLTALRDLLVDCGIGVDPNTEGELDTGASYVSPHRALVFCQMKEM 1682 Query: 81 LAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L K + ++N + +L + G GLNL Sbjct: 1683 LDIVQEDVLKKMLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1742 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1743 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRF 1796 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1797 KIDVASTVVN 1806 >gi|297696366|ref|XP_002825369.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA helicase INO80 complex homolog 1-like [Pongo abelii] Length = 1537 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 53/127 (41%), Gaps = 6/127 (4%) Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 + + + + ++ N I + + G G+NL + Sbjct: 1112 CCMPEYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTA-AD 1170 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++F+ W+ +++ + R + G + V VY LI + TI+E +LQR + KS I Sbjct: 1171 TVIFYDSDWNPT-----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEI 1225 Query: 191 QDLLLNA 197 Q ++++ Sbjct: 1226 QRMVISG 1232 >gi|156039515|ref|XP_001586865.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980] gi|154697631|gb|EDN97369.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980 UF-70] Length = 861 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + + Sbjct: 567 LKAIGMLKKLCNHPDLLNLSDDLPGCEKYWPEDYVPKDGRGRDRDIKPWYSGKMQVLDRM 626 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L K + K + ++N+ Sbjct: 627 LARIRQDTNDKIVLISNYTQTLDMFDKLCRNRGYGSLRLDGTMNVTKRQKLVDKFNDPDG 686 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 687 QEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 740 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 741 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 772 >gi|224077261|ref|XP_002195547.1| PREDICTED: chromodomain helicase DNA binding protein 6 [Taeniopygia guttata] Length = 2673 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 68/237 (28%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + + L N + ++ + N + + K Sbjct: 679 KYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHCP 738 Query: 60 E--------------------VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 E ++ K A +++ L L+ Q R + Sbjct: 739 EAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 798 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 799 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 855 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 856 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 909 >gi|157130680|ref|XP_001661961.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti] gi|108881922|gb|EAT46147.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti] Length = 791 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 82/235 (34%), Gaps = 46/235 (19%) Query: 2 KQYHKFQRE---LYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEE------------ 45 + Y F + L+ ++A + S +L N E+ Sbjct: 408 ELYKSFLQSDSIRRSMLEKAQVKASLTALSNITSLKKLCNHPDLVYEKIQERADGFENAH 467 Query: 46 ---------KHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ--- 90 K + K+ L+ ++ + I++ ++ L +K + Sbjct: 468 KILPSNYSSKELRPEFGGKLMVLDCMLASIKMNTDDKIVLVSNYTQTLDLFEKLCRKRGY 527 Query: 91 -------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 T+ K + E+N+ + + G GLNL G N LV F W+ Sbjct: 528 CYVRLDGSMTIKKRGKVVDEFNKPDSKEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNP 586 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ F+Y L+A TI+E + QR K + + +++ Sbjct: 587 AN-----DEQAMARVWRDGQKKPCFIYRLLATGTIEEKIFQRQTHKKALSNTVVD 636 >gi|323454081|gb|EGB09951.1| hypothetical protein AURANDRAFT_36628 [Aureococcus anophagefferens] Length = 712 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 28/196 (14%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------DEKIKALEVIIE--KANAAP 70 + + ++ + + + + + K++ L+ ++ N Sbjct: 494 TYKSLLNLLMQLRKTCCHPFLFPDAEGDPDETTLEELVAASGKLRVLDRLLLKLHRNGHR 553 Query: 71 IIVAYHFNSD----------LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPAS 118 ++V F+S + ++ +NE P + + Sbjct: 554 VVVFSQFSSMVDILDDYCRLRGWSFCRLTGATNRVRRVVNVRAFNEPSSPLFIFLMTTRA 613 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NLQ + V + W+ + + + R + G + V +Y L A T +E Sbjct: 614 GGLGINLQS-ADTCVLYDSDWNPQA-----DLQAMARVHRLGQTKTVHIYRLCAAGTAEE 667 Query: 179 LVLQRLRTKSTIQDLL 194 VLQR + K + ++ Sbjct: 668 RVLQRSQKKLYLSHVV 683 >gi|261203723|ref|XP_002629075.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081] gi|239586860|gb|EEQ69503.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081] Length = 828 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + + W + + Sbjct: 530 LKAIGLLKKLCNHPDLLNLGTDLPGSEQFFPDDYVPMECRGRDRDVRSWYSGKMMVLDRM 589 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L ++ + K + ++N+ Sbjct: 590 LARIRQDTNDKIVLISNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVDKFNDPNG 649 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 650 EEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 703 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 704 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 735 >gi|321261786|ref|XP_003195612.1| chromodomain helicase [Cryptococcus gattii WM276] gi|317462086|gb|ADV23825.1| Chromodomain helicase, putative [Cryptococcus gattii WM276] Length = 1502 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 85/226 (37%), Gaps = 30/226 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------VHD 53 Y + + L + + + ++ + +N ++ + + ++ Sbjct: 684 YKNILTKNFAVLSKGGTQQVSLMNVAMELKKASNHPYLFEGAEDRNKPANEILRGLVMNS 743 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 K+ L++++ K++ +++ L + + + +I Sbjct: 744 GKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDIISDYMTARGYVHQRLDGTVPSDVRKKSI 803 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N P + G G+NL + ++ F ++ + + + R + Sbjct: 804 EHFNAPGSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDYNPQN-----DLQAMARAHRI 857 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G +R V ++ L+++ TI+E +L+R K ++ ++N + H+ Sbjct: 858 GQQRHVSIFRLVSKGTIEEDILERAMRKMLLEYAIINKMDTTGAHI 903 >gi|237837635|ref|XP_002368115.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49] gi|211965779|gb|EEB00975.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49] gi|221509119|gb|EEE34688.1| transcriptional regulator atrx, putative [Toxoplasma gondii VEG] Length = 873 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 76/237 (32%), Gaps = 48/237 (20%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI----- 62 ++ + +G+ S ++L N + + ++ K + Sbjct: 440 RKMFTAEAEGKGGFTGRVLSSIQGLMKLCNHPSLVKSQAQMLQGFEKCEKYFSELDLEGQ 499 Query: 63 ------------------------IEKANAAPIIVAYHFNSDLARL-QKAFPQGRTLDK- 96 I I++ ++ L + G + + Sbjct: 500 KARSRMVRTEISGKLLLLARLLDVIRTTTNDKIVLISNYTQTLDLFDRMCRDCGYPVMRL 559 Query: 97 --------DPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I ++N+ P + + G G+NL G N LV F W+ Sbjct: 560 DGQTSIKKRHAMITKFNDPMNPHSFVFLLSSKAGGCGVNL-IGANRLVLFDPDWNPAN-- 616 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++ + R + G K++ ++Y + TI+E + QR K + +L++ + + Sbjct: 617 ---DKQALARVWRDGQKKSCYIYRFFSTGTIEEKIYQRQICKDGLSAMLVSDGENQI 670 >gi|167392422|ref|XP_001740146.1| chromodomain helicase DNA binding protein [Entamoeba dispar SAW760] gi|165895824|gb|EDR23413.1| chromodomain helicase DNA binding protein, putative [Entamoeba dispar SAW760] Length = 1623 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 74/223 (33%), Gaps = 34/223 (15%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 K Y + L + + + ++ ++ N + + Sbjct: 898 KYYRALYDKNREFLNKGCVGSNVPHLQNLMIQLRKVCNHPFLIPGVEEKEIANPEDPESY 957 Query: 51 -----VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K N +++ L L+K + + Sbjct: 958 AQELIKSSGKMVLLDKLLPKLNTDGHKVLIFSQLKGVLDILEKYLSYKKYTYERLDGSVR 1017 Query: 98 ----PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I + +G+ + + G G+NL + ++ + W+ + + Sbjct: 1018 SNDRQNAIDRFMKGERFVFLLCTRAGGIGINL-SEADTVIIYDSDWNPQN-----DLQAQ 1071 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V VY L+++NT + + +R K + +L+ Sbjct: 1072 ARCHRIGQKKEVKVYRLVSKNTYERYMFERASMKLGLDQAILS 1114 >gi|17862908|gb|AAL39931.1| SD02886p [Drosophila melanogaster] Length = 1638 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 +K K+ L+ ++ KAN +++ + L++ + Sbjct: 1142 SIVVPDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMR 1201 Query: 96 ---------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I + + G G+NL + ++F+ W+ Sbjct: 1202 LDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT---- 1256 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1257 -VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 1306 >gi|194210929|ref|XP_001917731.1| PREDICTED: transcription termination factor, RNA polymerase II [Equus caballus] Length = 1167 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 68/246 (27%), Gaps = 69/246 (28%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV----------- 61 DLQG + S+ ++ Q E+ E + Sbjct: 911 ADLQGS--STVHILSQLLRLRQCCCHLSLLKSALDPTELKSEALVLSLEEQLSALTLSEL 968 Query: 62 ---------------------------------------IIEKANAAPIIVAYHFNSDLA 82 I + + ++ + S L Sbjct: 969 DNLEPSSTVALNGKCFQVELFEDVRESTKISSLLAELEAIRRNSGSQKSVIVSQWTSMLK 1028 Query: 83 ----------RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 + ++ +N + ++ + G GLNL GGN Sbjct: 1029 VVALHLKRRGLTYATIDGSVNPKQRMDLVEAFNSSRGPQVMLISLLAGGVGLNLT-GGNH 1087 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L + W+ Q +RI + G ++ V ++ + + T++E +LQ K + Sbjct: 1088 LFLLDMHWNPSLEDQACDRI-----YRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLA 1142 Query: 192 DLLLNA 197 +L+ Sbjct: 1143 KQVLSG 1148 >gi|194208593|ref|XP_001915417.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 9 (ATP-dependent helicase CHD9) (CHD-9) (Chromatin-related mesenchymal modulator) (CReMM) (Chromatin-remodeling factor CHROM1) (Peroxisomal proliferator-activated receptor A-interacting complex 3 [Equus caballus] Length = 2818 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1110 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1169 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1170 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1229 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1230 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1286 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1287 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSNV 1343 >gi|324499672|gb|ADY39866.1| Helicase ssl-1 [Ascaris suum] Length = 2173 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 24/208 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y K + D+ E+ + + +Q+ E E K++ L + Sbjct: 1349 AYQKQLAQERADICRRIFESDDPLVAKCRMMQM-----LQFPELRLIEYDCGKLQVLSSL 1403 Query: 63 IEKA--NAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK---------DPCTIQEWN-EGKI 109 + ++ + L G + ++ +N + KI Sbjct: 1404 LRDLFLYKHRCLIFTQMSRMLDVLQAFLSFHGYQYFRLDGTTGIEQRQAMMERFNSDPKI 1463 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G G+NL G + ++F+ W+ ++ R + G R V +Y Sbjct: 1464 FCFILSTRSGGIGVNLT-GADTVIFYDSDWNPT-----MDAQAQDRCHRIGQTRNVTIYR 1517 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI++ TI+E +L++ K + +L ++ Sbjct: 1518 LISERTIEENILKKAMQKRRLGELAIDE 1545 >gi|320580373|gb|EFW94596.1| chromatin remodelling complex ATPase chain ISW1 [Pichia angusta DL-1] Length = 1018 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 79/225 (35%), Gaps = 31/225 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y + + G + + ++ + N + Sbjct: 361 IKWYRNLLEKDIDAVNGAIGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 420 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKD 97 + K+ L+ +++ ++ + +++ + L L+ ++ Sbjct: 421 VYNSGKMIVLDKLLKKLQSEGSRVLIFSQMSRLLDILEDYCYLRGYQYCRIDGSTAHEER 480 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I ++N+ + + G G+NL + +V + W+ + + + R Sbjct: 481 IQSIDDFNKPGSDKFIFLLTTRAGGLGINLTT-ADAVVLYDSDWNPQA-----DLQAMDR 534 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ V V+ + +N I+E VL+R K + L++ + Sbjct: 535 AHRIGQKKQVKVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRA 579 >gi|146097991|ref|XP_001468285.1| DNA-dependent ATPase; transcription activator [Leishmania infantum] gi|134072652|emb|CAM71368.1| putative DNA-dependent ATPase [Leishmania infantum JPCM5] Length = 1103 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 77/225 (34%), Gaps = 39/225 (17%) Query: 8 QRELYCDLQGENIEAFNSA--------SKTVKCLQLANGAVYYDEEKHWKEV-------- 51 QRE Y ++ ++ E N A + + ++ N D + Sbjct: 409 QREWYMNVLAKDAEVLNKAGGSVASLTNVMMSLRKVINHPYLMDGGEEGPPFVTDEKLVR 468 Query: 52 HDEKIKALEVIIEK-----ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K+ L+ ++ + +++ F S L L+ + Sbjct: 469 TSGKMIILDKLLHRLRADVQGKHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSGYD 528 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + + G G+NLQ N ++ + W+ + ++ Sbjct: 529 RDSQMASFNSPSSDYFIFLLSTRAGGLGINLQA-ANHVILYDSDWNPQ-----MDLQAQD 582 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G KR+V VY + T++E + +R K + +++ + Sbjct: 583 RAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQQGR 627 >gi|121806946|sp|Q2UTQ9|INO80_ASPOR RecName: Full=Putative DNA helicase ino80 gi|83764912|dbj|BAE55056.1| unnamed protein product [Aspergillus oryzae] Length = 1444 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1214 DSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1273 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1274 TVADFQQRPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1327 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1328 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1366 >gi|322502240|emb|CBZ37323.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1103 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 77/225 (34%), Gaps = 39/225 (17%) Query: 8 QRELYCDLQGENIEAFNSA--------SKTVKCLQLANGAVYYDEEKHWKEV-------- 51 QRE Y ++ ++ E N A + + ++ N D + Sbjct: 409 QREWYMNVLAKDAEVLNKAGGSVASLTNVMMSLRKVINHPYLMDGGEEGPPFVTDEKLVR 468 Query: 52 HDEKIKALEVIIEK-----ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K+ L+ ++ + +++ F S L L+ + Sbjct: 469 TSGKMIILDKLLHRLRADVQGKHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSGYD 528 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + + G G+NLQ N ++ + W+ + ++ Sbjct: 529 RDSQMASFNSPSSDYFIFLLSTRAGGLGINLQA-ANHVILYDSDWNPQ-----MDLQAQD 582 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G KR+V VY + T++E + +R K + +++ + Sbjct: 583 RAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQQGR 627 >gi|157875048|ref|XP_001685931.1| DNA-dependent ATPase; transcription activator [Leishmania major strain Friedlin] gi|68129004|emb|CAJ06440.1| putative DNA-dependent ATPase [Leishmania major strain Friedlin] Length = 1103 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 77/225 (34%), Gaps = 39/225 (17%) Query: 8 QRELYCDLQGENIEAFNSA--------SKTVKCLQLANGAVYYDEEKHWKEV-------- 51 QRE Y ++ ++ E N A + + ++ N D + Sbjct: 409 QREWYMNVLAKDAEVLNKAGGSVASLTNVMMSLRKVINHPYLMDGGEEGPPFVTDEKLVR 468 Query: 52 HDEKIKALEVIIEK-----ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K+ L+ ++ + +++ F S L L+ + Sbjct: 469 TSGKMVILDKLLHRLRADVQGRHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSGYD 528 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + + G G+NLQ N ++ + W+ + ++ Sbjct: 529 RDSQMASFNSPSSDYFIFLLSTRAGGLGINLQA-ANHVILYDSDWNPQ-----MDLQAQD 582 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G KR+V VY + T++E + +R K + +++ + Sbjct: 583 RAHRIGQKRSVRVYRFVTDGTLEEKMYRRALKKLYLDAVVVQQGR 627 >gi|24648168|ref|NP_732413.1| Ino80 [Drosophila melanogaster] gi|75026769|sp|Q9VDY1|INO80_DROME RecName: Full=Putative DNA helicase Ino80; Short=dINO80 gi|23171713|gb|AAF55658.2| Ino80 [Drosophila melanogaster] Length = 1638 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 +K K+ L+ ++ KAN +++ + L++ + Sbjct: 1142 SIVVPDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMR 1201 Query: 96 ---------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I + + G G+NL + ++F+ W+ Sbjct: 1202 LDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT---- 1256 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1257 -VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 1306 >gi|115657922|ref|XP_785657.2| PREDICTED: similar to Rad54b [Strongylocentrotus purpuratus] gi|115931907|ref|XP_001183532.1| PREDICTED: similar to Rad54b [Strongylocentrotus purpuratus] Length = 770 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 65/178 (36%), Gaps = 25/178 (14%) Query: 39 AVYYDEEKHWKEV--HDEKIKALEVIIEKAN-----AAPIIVAYHFNSDLAR-------- 83 +Y + + + H K+ L ++ + +++ ++ L Sbjct: 480 PIYPPDYSEGRPLLAHCGKLCVLSEMLRAMHADPTRRERLVLVSNYTQTLDILQALCSIE 539 Query: 84 --LQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 K ++ +N + + G GLNL G + L+ + + W Sbjct: 540 GYQFCRLDGSTPTAKRQSIVEHFNSSYAKETIFLLSSKAGGVGLNL-IGASRLLLYDIDW 598 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G K+ V +Y LI TI+E + QR +K ++ +++A Sbjct: 599 NPAN-----DLQAMARVWRDGQKKTVHIYRLITAGTIEEKIYQRQISKQSLSGAVVDA 651 >gi|110777198|ref|XP_624414.2| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog [Apis mellifera] Length = 1966 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 66/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + + N + E Sbjct: 976 KYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTAPNGSYETS 1035 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLD 95 K+ L +++K + +++ L + T Sbjct: 1036 ALIKAAGKLVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGNITGA 1095 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I +N + + G G+NL + ++ + W+ + Sbjct: 1096 QRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1149 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1150 SRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1191 >gi|268564215|ref|XP_002639045.1| C. briggsae CBR-TAG-192 protein [Caenorhabditis briggsae] Length = 2869 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 72/242 (29%), Gaps = 45/242 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 K Y + L A + + ++ + N + + Sbjct: 1375 KFYRAILERNFSHLCKGT-SAPSLMNVMMELRKCCNHPFLINGAEETIMNDFRLAHPDWD 1433 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K+ +E ++ K + +++ L L++ + Sbjct: 1434 DETLAQKALVQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLITMSYPFERI 1493 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ F W+ + Sbjct: 1494 DGNVRGDMRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN--- 1549 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKETI 203 + R + G K+ V VY LI NT + + + K + +L ALK E Sbjct: 1550 --DLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEGT 1607 Query: 204 HV 205 + Sbjct: 1608 AL 1609 >gi|3413850|dbj|BAA32289.1| KIAA0444 protein [Homo sapiens] Length = 978 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 21/202 (10%), Positives = 60/202 (29%), Gaps = 33/202 (16%) Query: 21 EAFNSASKTVKCLQLANGAVYYD-------------EEKHWKEVHDEKIKALEVIIEK-- 65 + + + + N + + K+ L+ +++K Sbjct: 2 NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLR 61 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIP--LLF 113 +++ L L+ + I +N Sbjct: 62 DEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFL 121 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ + W+ + +R + G + V +Y + + Sbjct: 122 LSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAFSRAHRIGQNKKVMIYRFVTR 175 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 +++E + Q + K + L++ Sbjct: 176 ASVEERITQVAKRKMMLTHLVV 197 >gi|320582108|gb|EFW96326.1| chromatin remodelling complex ATPase chain ISW1 [Pichia angusta DL-1] Length = 1033 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 78/228 (34%), Gaps = 39/228 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 + Q++ Y L +I+A N + ++ + N + Sbjct: 383 EMQKKWYQKLLERDIDAVNGANGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 442 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG----------RTL 94 + +K+K L+ ++ K + +++ + L L+ Sbjct: 443 EHLIYNSQKMKVLDKMLKRFKEQGSRVLIFSQMSRMLDILEDYCSFRGFEYCRIDGQTDH 502 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I E++ + + G G+NL +I+ + W+ + + Sbjct: 503 VDRIRAIDEYSAPDSKKFVFLLTTRAGGLGINLTS-ADIVFLYDSDWNPQA-----DLQA 556 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G + V V+ + Q I+E VL+R K + L++ ++ Sbjct: 557 MDRAHRIGQTKQVKVFRFVTQKAIEEKVLERASQKLRLDQLVIQQGRQ 604 >gi|321262603|ref|XP_003196020.1| ATPase; Ino80p [Cryptococcus gattii WM276] gi|317462495|gb|ADV24233.1| ATPase, putative; Ino80p [Cryptococcus gattii WM276] Length = 1813 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 62/169 (36%), Gaps = 19/169 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-------- 90 + V K+ L+ ++ + +++ + + +++ Sbjct: 1488 LHIPPTKRLIVDSAKLARLDSLLRELKAGGHRVLLYFQMTKMMDLIEEYLIFRQYKYLRL 1547 Query: 91 ---GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ I + + G G+NL + ++F+ W+ Sbjct: 1548 DGSSPIAERRDMVTGWQTNPDIFVFCLSTRAGGLGINLTA-ADTVIFYDHDWNPSS---- 1602 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G + V VY L+A+ TI+E +LQ R K +QD+++ Sbjct: 1603 -DAQAMDRAHRVGQTKQVTVYRLVARGTIEERILQMARGKKDVQDVVVG 1650 >gi|309355522|emb|CAP38925.2| CBR-TAG-192 protein [Caenorhabditis briggsae AF16] Length = 2927 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 72/242 (29%), Gaps = 45/242 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 K Y + L A + + ++ + N + + Sbjct: 1391 KFYRAILERNFSHLCKGT-SAPSLMNVMMELRKCCNHPFLINGAEETIMNDFRLAHPDWD 1449 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K+ +E ++ K + +++ L L++ + Sbjct: 1450 DETLAQKALVQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLITMSYPFERI 1509 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ F W+ + Sbjct: 1510 DGNVRGDMRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN--- 1565 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKETI 203 + R + G K+ V VY LI NT + + + K + +L ALK E Sbjct: 1566 --DLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEGT 1623 Query: 204 HV 205 + Sbjct: 1624 AL 1625 >gi|330864739|ref|NP_001178471.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Bos taurus] Length = 1051 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 416 IKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 475 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 476 PPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 535 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 536 DGQTPHEEREDKFLEVELLGQREAIEAFNIPNSSKFIFMLSTRAGGLGINL-ASADVVIL 594 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 595 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 649 Query: 195 LNALK 199 + + Sbjct: 650 IQQGR 654 >gi|178056748|ref|NP_001116655.1| DNA repair and recombination protein RAD54-like [Sus scrofa] gi|168084900|dbj|BAG09488.1| DNA repair protein RAD54 [Sus scrofa] Length = 747 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 84/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L+ + + +S T +L N ++ +E Sbjct: 422 ELYKRFLRQAKPAEELREGKMSVSSLSSITS-LKKLCNHPALIYDKCVEEEDGFAGALDF 480 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 481 FPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY 540 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 541 VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 599 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 600 -----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 648 >gi|146297575|ref|YP_001181346.1| helicase domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145411151|gb|ABP68155.1| helicase domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 177 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 67/163 (41%), Gaps = 18/163 (11%) Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTL 94 E K++ E I+E + ++V + L Sbjct: 2 QNYEGSSGKLELFEEILEDVLESNHRVVVFSQWVEMLKILEERIKERGFEYFYLNGSTKS 61 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + +N G+ + + G GLNL G ++++ + LWW+ +E + Sbjct: 62 EERIDMVNRFNGGEKQVFLVSLKAGGFGLNLT-GADVVILYDLWWNPA-----VENQAMD 115 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + +V V+ LI +NTI+E + + + K + D ++++ Sbjct: 116 RAHRIGQENSVQVFRLITKNTIEERIFELQQKKKDLFDQVVSS 158 >gi|281352812|gb|EFB28396.1| hypothetical protein PANDA_006982 [Ailuropoda melanoleuca] Length = 2707 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 699 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 758 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 759 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 818 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 819 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 875 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 876 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 929 >gi|238503544|ref|XP_002383005.1| RSC complex subunit (Sth1), putative [Aspergillus flavus NRRL3357] gi|220690476|gb|EED46825.1| RSC complex subunit (Sth1), putative [Aspergillus flavus NRRL3357] Length = 1095 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 77/225 (34%), Gaps = 33/225 (14%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 K Y + + D +G ++ ++ +L N ++ + Sbjct: 532 KLYKQLVTHNKMAVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEPVEDQMNPGRGTNDL 591 Query: 53 ----DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + L+ I+ K +++ + + ++ D Sbjct: 592 LWRTSGKFELLDRILPKFRATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDD 651 Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + + G GLNLQ + ++ F W+ + + Sbjct: 652 RSDLLKLFNAENSEYFCFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQD 705 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K V + LI+ N+++E +L+R + K + ++ A K Sbjct: 706 RAHRIGQKNEVRILRLISSNSVEEKILERAQFKLDMDGKVIQAGK 750 >gi|322701898|gb|EFY93646.1| recombinational repair protein [Metarhizium acridum CQMa 102] Length = 819 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 72/212 (33%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVYYD-----------------------EEKHWKEVHDEKIKALEVI 62 +L N + ++ + + K+ L+ + Sbjct: 467 LKAINILKKLCNHPDLLNLSDDLPGSECCFPPEYTPKEARGRDRDVRPEYSGKMMVLDRM 526 Query: 63 I---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 + + I++ ++ S L ++ ++K + +N+ Sbjct: 527 LARIRQDTNDKIVLISNYTSTLDLFERLCRSRQYGCLRLDGTMNVNKRQKLVDRFNDPNG 586 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 587 EEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 640 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 641 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 672 >gi|301766196|ref|XP_002918518.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like, partial [Ailuropoda melanoleuca] Length = 2710 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 702 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 761 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 762 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 821 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 822 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 878 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 879 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 932 >gi|195430100|ref|XP_002063095.1| GK21565 [Drosophila willistoni] gi|194159180|gb|EDW74081.1| GK21565 [Drosophila willistoni] Length = 1026 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 82/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QR+ Y + ++I+ N A K ++ + N + Sbjct: 366 KMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTH 425 Query: 49 KEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K+ L+ ++ K +++ L L+ + Sbjct: 426 LVYNSGKMAILDKLLPKLQEQESRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHED 485 Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 IQE+N + + G G+NL ++++ + W+ + ++ + Sbjct: 486 RNRQIQEYNMENSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 539 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI ++T++E +++R K + +++ + Sbjct: 540 RAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584 >gi|303316872|ref|XP_003068438.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240108119|gb|EER26293.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1905 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 75/243 (30%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 K Q+EL L EA + +L N +E H + Sbjct: 1583 KKEQKELAKKLGSTEKEAKEHIFQALQYMRRLCNSPALVVKEGHRQYQEVQRYLANKNSN 1642 Query: 52 -----HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLAR---- 83 H K+ AL ++ + ++ L Sbjct: 1643 IRDISHAPKLTALRDLLIDCGIGVDPSAEGELNTAASYVSPHRALIFCQMKEMLDIVQND 1702 Query: 84 ---------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 K + ++N + +L + G GLNL G + ++ Sbjct: 1703 VLKKLLPSIQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVI 1761 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1762 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1816 Query: 194 LLN 196 ++N Sbjct: 1817 VVN 1819 >gi|303311053|ref|XP_003065538.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105200|gb|EER23393.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735 delta SOWgp] Length = 799 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 65/212 (30%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 501 LKAIGILKKLCNHPDLLNLSADLPGSEQLFPDDYVPPEGRGRDRDVKSWYSGKMMVLDRM 560 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K T+ K + +N+ Sbjct: 561 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDPDG 620 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 621 EEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 674 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K + ++++ + Sbjct: 675 YRFIATGSIEEKIFQRQSHKQLLSSCVVDSAE 706 >gi|221114007|ref|XP_002155441.1| PREDICTED: similar to DNA excision repair protein ERCC-6 [Hydra magnipapillata] Length = 1079 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 68/223 (30%), Gaps = 40/223 (17%) Query: 3 QYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 Y +F R++ L G+ +K ++ N ++ Sbjct: 534 IYKEFISSRDVASILNGD----MKIFPGLIKLRKICNHPDLVSLAAEVEKGKPASLDDAS 589 Query: 51 -----VHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRT 93 K+ +E ++ K +++ L + Sbjct: 590 CYGFWKRSGKMIVVENLLRMWKHQGHRVLLFTQSKQMLDILEGFLKAAEHSYMRMDGTTS 649 Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++ I + G GLNL N ++ + W+ ++ Sbjct: 650 VKSRHGIVKKFHESKNIFVFLLTTRVGGLGLNL-IAANRVIIYDPDWNPS-----VDSQA 703 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + V +Y L+ TI+E + R K + + +L Sbjct: 704 RERSWRIGQLKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVL 746 >gi|170043847|ref|XP_001849581.1| domino [Culex quinquefasciatus] gi|167867144|gb|EDS30527.1| domino [Culex quinquefasciatus] Length = 1027 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 75/198 (37%), Gaps = 35/198 (17%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAP 70 + I A ++ + +Q G K++ L+ ++++ + Sbjct: 607 LRILHPIISAMSTLFPDPRLIQYDCG----------------KLQTLDRLLKELKSGGHR 650 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASC 119 +++ L L+ + + ++ +N + ++ + S Sbjct: 651 VLIFTQMTRMLDVLEAFLNYHGHIYLRLDGTTKVEQRQLLMERFNGDKRMFVFILSTRSG 710 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G + ++F+ W+ ++ R + G R V +Y L+++ TI+E Sbjct: 711 GVGINLT-GADTVIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTIEEN 764 Query: 180 VLQRLRTKSTIQDLLLNA 197 +L++ K + DL + Sbjct: 765 ILKKANQKRMLGDLAIEG 782 >gi|73946645|ref|XP_860367.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 21 [Canis familiaris] Length = 1553 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 37/226 (16%) Query: 3 QYHKFQRELYCDLQGEN----IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 Y Q + G + A + ++ ++ N + + Sbjct: 963 LYRHMQAKGILLTDGSEKDKKVRAKTLMNTIMQLRKICNHPYMFQHIETLICKKNFNIKT 1022 Query: 53 -------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 K + L+ I+ K A +++ S + ++ F Sbjct: 1023 FRSLYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1082 Query: 94 LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++++NE + + G GLNLQ + +V F W+ + + Sbjct: 1083 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQ 1136 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 AQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1182 >gi|74197316|dbj|BAC37509.2| unnamed protein product [Mus musculus] Length = 378 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 87/232 (37%), Gaps = 39/232 (16%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEEK-- 46 +K Y K QRE Y + ++I+ NS + ++ + N +D + Sbjct: 55 VKIYVGLSKMQREWYTRILIKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 114 Query: 47 ------HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 + K+ L+ ++ K + +++ L L+ Sbjct: 115 PLFTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 174 Query: 91 -GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +T + +I +NE + + G G+NL ++++ + W+ + Sbjct: 175 DEQTPHERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ----- 228 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + + G ++ V V+ I NT++E +++R K + +++ + Sbjct: 229 VDLQAMDYAHRIGQRKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 280 >gi|115390074|ref|XP_001212542.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114194938|gb|EAU36638.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1205 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 75/211 (35%), Gaps = 34/211 (16%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII---- 63 +++ +L+ E + N SK +L V KI+ I+ Sbjct: 997 KKKTLAELKKE--ASKNIKSKRKYLRRL-----------EKTWVTSAKIEKTLEILDGIR 1043 Query: 64 EKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + I+ F S L ++ + D++ + ++ ++ Sbjct: 1044 QGEGNEKTIIFSQFTSLLDLLEVPISRRGWNYRRYDGSMKPQDRNASVLDFTDDPDCRIM 1103 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + GLNL + ++ F +W+ IE + R + G R V ++ ++ Sbjct: 1104 LVSLKAGNSGLNLVA-ASQVIIFDPFWNP-----YIEEQAIDRAHRIGQMREVQIHRILV 1157 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 NT+++ +L+ K + + L+ + + Sbjct: 1158 PNTVEDRILELQDKKRELIEGALDEKASKNV 1188 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 6/67 (8%), Positives = 19/67 (28%), Gaps = 6/67 (8%) Query: 1 MKQYHKFQRELYCD----LQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 M+ Y + + L+ + N ++ Q + + + Sbjct: 780 MELYQALETKTQLQFNRYLEAGTVGRNYSNILVLLLRLRQACCHPHLITDFSVKLNANTD 839 Query: 55 KIKALEV 61 ++ +E Sbjct: 840 ELNLVEN 846 >gi|154273573|ref|XP_001537638.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces capsulatus NAm1] gi|150415246|gb|EDN10599.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces capsulatus NAm1] Length = 974 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + QG+ + ++ + N + Sbjct: 424 VKWYQKILEKDIDAVNGAQGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 483 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKD 97 + K+ L+ I+ K + +++ + L + Sbjct: 484 IDNAGKMVILDKILKRMKNQGSRVLIFSQMSRVLDILEDYCVFREHQYCRIDGSTAHEDR 543 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + + G G+NL +I++ + W+ + + + R Sbjct: 544 IAAIDEYNRPGSEKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 597 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V V+ + +N I+E VL+R K + L++ + + Sbjct: 598 AHRIGQTKQVVVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRAQ 643 >gi|242208372|ref|XP_002470037.1| predicted protein [Postia placenta Mad-698-R] gi|220730937|gb|EED84787.1| predicted protein [Postia placenta Mad-698-R] Length = 1497 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 77/227 (33%), Gaps = 29/227 (12%) Query: 2 KQYHKFQRELYC----DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----- 52 + Y + ++ D +G++ +++ ++ ++ ++ + Sbjct: 868 QLYKQMKKYKMIADGKDTKGKSGGVKGLSNELMQLRKICQHPFLFESVEDRINPSGIVDD 927 Query: 53 -----DEKIKALEVIIEKA--NAAPIIVAYH----------FNSDLARLQKAFPQGRTLD 95 KI+ L I+ K +++ + F + G + Sbjct: 928 KIVRASGKIELLSRILPKFFATDHRVLIFFQMTKVMDIMEDFLKFMGWKYLRLDGGTKTE 987 Query: 96 KDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL-EEHQQMIERIG 152 +Q +N I + + G GLNLQ +++ + + + Sbjct: 988 DRAGHVQLFNAPDSDIRVFILSTRAGGLGLNLQTADTVIMNNLIDNSFDSDWNPHADLQA 1047 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V + I + +++E + QR R K I D ++ A + Sbjct: 1048 QDRAHRIGQTKVVRILRFITEKSVEESMFQRARYKLDIDDKVIQAGR 1094 >gi|50290467|ref|XP_447665.1| hypothetical protein [Candida glabrata CBS 138] gi|49526975|emb|CAG60602.1| unnamed protein product [Candida glabrata] Length = 1039 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 80/224 (35%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEK 46 Q + Y L ++I+A N A ++ + N + Sbjct: 372 DMQVQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 431 Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ +++ K + +++ + L L+ + Sbjct: 432 EHLIFNAGKMIVLDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRNYNYCRIDGSTSH 491 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I E+N+ + + G G+NL + +V F W+ + + Sbjct: 492 EERIDAIDEYNKPNSEKFVFLLTTRAGGLGINLVT-ADTVVLFDSDWNPQA-----DLQA 545 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V VY + +N I+E VL+R K + L++ Sbjct: 546 MDRAHRIGQKKQVHVYRFVTENAIEEKVLERAAQKLRLDQLVIQ 589 >gi|256272897|gb|EEU07865.1| Isw1p [Saccharomyces cerevisiae JAY291] Length = 1129 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 77/229 (33%), Gaps = 35/229 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYYD----------EEKHW 48 K Y K + + G N + + ++ + N +D +E Sbjct: 439 KWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLV 498 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDP 98 ++ + K + +++ + + Sbjct: 499 YNAAKLQVLDKLLKKLKGEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRI 558 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N + + G G+NL +++V + W+ + + + R Sbjct: 559 QAIDDYNAPDSKKFVFLLTTRAGGLGINLTS-ADVVVLYDSDWNPQA-----DLQAMDRA 612 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN----ALKKE 201 + G K+ V V+ L+ N+++E +L+R K + L++ +LKK+ Sbjct: 613 HRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKK 661 >gi|195109608|ref|XP_001999375.1| GI24474 [Drosophila mojavensis] gi|193915969|gb|EDW14836.1| GI24474 [Drosophila mojavensis] Length = 1663 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 +K K+ L+ ++ KA +++ + L++ + Sbjct: 1156 SIVVPDKETLITDAGKLFVLDSLLTRLKAEGHRVLIYSQMTKMIDLLEEYMWHRKHRYMR 1215 Query: 96 ---------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I + + G G+NL + ++F+ W+ Sbjct: 1216 LDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT---- 1270 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1271 -VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 1320 >gi|209877571|ref|XP_002140227.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209555833|gb|EEA05878.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1100 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 84/224 (37%), Gaps = 37/224 (16%) Query: 7 FQRELYCDLQGENIEAFN---------SASKTVKCLQLANGAVYYD--------EEKHWK 49 QR LY D+ +NI+A + ++ + N +D Sbjct: 426 MQRTLYRDILSKNIDALQERDSGGRVRLINLAMQLRKACNHPYLFDGYEDKNEDPFGEHV 485 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKD 97 + K+ L+ + +K N + I++ F + + Sbjct: 486 IENSGKMIMLDRLTKKLLQNGSRILIFSQMARILDILEDFCYMRKYKYCRIDGNTSTEDR 545 Query: 98 PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N+ I + + G G+NL +I++ + W+ + ++ + R Sbjct: 546 DTQISDFNKPNSDISIFLLSTRAGGLGVNL-ATADIVIIYDSDWNPQ-----VDLQAMDR 599 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V++Y L +NTI+E +L+R K ++ ++ K Sbjct: 600 AHRIGQKKPVYIYRLFHENTIEEKILERANLKLQLESAIIQQGK 643 >gi|119187661|ref|XP_001244437.1| hypothetical protein CIMG_03878 [Coccidioides immitis RS] Length = 1905 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 75/243 (30%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 K Q+EL L EA + +L N +E H + Sbjct: 1583 KKEQKELAKKLGSTEKEAKEHIFQALQYMRRLCNSPALVVKEGHRQYQEVQRYLANKNSN 1642 Query: 52 -----HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLAR---- 83 H K+ AL ++ + ++ L Sbjct: 1643 IRDISHAPKLTALRDLLIDCGIGVDLSVEGELNTAASYVSPHRALIFCQMKEMLDIVQND 1702 Query: 84 ---------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 K + ++N + +L + G GLNL G + ++ Sbjct: 1703 VLKKLLPSIQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVI 1761 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1762 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1816 Query: 194 LLN 196 ++N Sbjct: 1817 VVN 1819 >gi|301752864|ref|XP_002912282.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Ailuropoda melanoleuca] Length = 2885 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1110 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1169 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1170 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1229 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1230 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1286 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1287 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1343 >gi|1765914|emb|CAA71278.1| RAD54 [Drosophila melanogaster] Length = 784 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 42/224 (18%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------------- 52 R D + + + + ++ + E+ +E Sbjct: 434 VRRSLADCNEK--ASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPK 491 Query: 53 ------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K L+ ++ +++ ++ L ++ + Sbjct: 492 DLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMS 551 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIG 152 + K + +N+ + +S G L G N L F W+ + Sbjct: 552 IKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DEQA 606 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 607 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 650 >gi|310790413|gb|EFQ25946.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1874 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 59/159 (37%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ KA +++ + + +++ + Sbjct: 1594 DSGKLATLDKLLTRLKAEGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1653 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1654 TVADFQTRPEIFIFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1707 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q +++ Sbjct: 1708 LGQTRQVTVYRLITKGTIEERIRKRAMQKEEVQRVVIQG 1746 >gi|327349292|gb|EGE78149.1| DsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis ATCC 18188] Length = 849 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + + W + + Sbjct: 551 LKAIGLLKKLCNHPDLLNLGTDLPGSEQFFPDDYVPMECRGRDRDVRSWYSGKMMVLDRM 610 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L ++ + K + ++N+ Sbjct: 611 LARIRQDTNDKIVLISNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVDKFNDPNG 670 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 671 EEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 724 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 725 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 756 >gi|291398172|ref|XP_002715776.1| PREDICTED: transcription termination factor, RNA polymerase II [Oryctolagus cuniculus] Length = 1163 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 30/246 (12%), Positives = 66/246 (26%), Gaps = 67/246 (27%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------------------------- 53 + S+ ++ Q E+ Sbjct: 913 STVHILSQLLRLRQCCCHLSLLKSALDPTELKSEGLVLSLEEQLSALTLSELHDPVPSPT 972 Query: 54 -----------------------EKIKALEVIIEKANAAPIIVAYHFNSDLA-------- 82 + LE I + + ++ + S L Sbjct: 973 VSLNGTCFKVELFEDTRESTKIASLLAELEAIRSNSKSQKSVIVSQWTSMLKVVALHLKR 1032 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N ++ + G GLNL GGN L + W Sbjct: 1033 HGLTYATIDGSVNPKQRMDLVEAFNRSSGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1091 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + Q +RI + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1092 NPSLEDQACDRI-----YRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSA 1146 Query: 200 KETIHV 205 + + Sbjct: 1147 ESVTKL 1152 >gi|294656285|ref|XP_458541.2| DEHA2D01672p [Debaryomyces hansenii CBS767] gi|199431348|emb|CAG86673.2| DEHA2D01672p [Debaryomyces hansenii] Length = 1041 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 31/225 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 380 IKWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHL 439 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKD 97 + K+ L+ ++ K + +++ + L L+ + + Sbjct: 440 VFNAGKMIILDKMLKKFKKEGSRVLIFSQMSRLLDILEDYCYLRDYSYCRIDGSTSHEDR 499 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N + + G G+NL +I++ + W+ + + + R Sbjct: 500 IEAIDQYNMPDSDKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQAMDR 553 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ V VY + +N I+E VL R K + L++ ++ Sbjct: 554 AHRIGQKKQVKVYRFVTENAIEEKVLDRAAQKLRLDQLVIQQGRQ 598 >gi|95147342|ref|NP_079410.4| chromodomain-helicase-DNA-binding protein 9 [Homo sapiens] Length = 2881 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1108 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1167 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1341 >gi|87130801|gb|ABD24032.1| PRIC320 isoform 1 [Homo sapiens] Length = 2881 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1108 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1167 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1341 >gi|307197292|gb|EFN78584.1| Chromodomain-helicase-DNA-binding protein 7 [Harpegnathos saltator] Length = 4395 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 72/233 (30%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + L A N + ++ + + + ++ Sbjct: 2016 KYYRGILERNFSFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNGAEDQIQLDYKTGEKE 2075 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K+ ++ ++ K A+ +++ L L+ + + Sbjct: 2076 DSEAYYHALVNSSGKMVLIDKLLPKLKASGHRVLIFSQMVKCLDLLEDYLLYKKYPYERI 2135 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2136 DGRIRGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2191 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V VY L+ +NT + + + K + +L ++ Sbjct: 2192 --DLQAQARCHRIGQQKMVKVYRLLCRNTYEREMFDKASLKLGLDKAILQSMN 2242 >gi|198432555|ref|XP_002131918.1| PREDICTED: similar to chromodomain helicase DNA binding protein 3 [Ciona intestinalis] Length = 1904 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEE-------------KH 47 K Y + L + + + + N +++ Sbjct: 936 KFYRYILARNFKGLNSRGGPNNSSLLNIMMDLKKCCNHPYLFNKPAEEAQRSHNGAFEGT 995 Query: 48 WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 996 ELTKTSGKLIVLQKMLRKLKDRGNRVLIFSQMTRMLDILEDFLEYEGYKYERIDGSITGS 1055 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +I +N + G G+NL + + + W+ + Sbjct: 1056 IRQESIDRFNAPNSDHFAFLLSTRAGGLGINL-ATADTVFIYDSDWNP-----HNDIQAF 1109 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V + + K + L++ Sbjct: 1110 SRAHRIGQTNKVMIYRFVTKNSVEERVAEVAKRKMMLTHLVV 1151 >gi|151946631|gb|EDN64853.1| ATPase component of a four subunit chromatin remodeling complex [Saccharomyces cerevisiae YJM789] gi|190408605|gb|EDV11870.1| ATPase component of a four subunit chromatin remodeling complex [Saccharomyces cerevisiae RM11-1a] Length = 1129 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 77/229 (33%), Gaps = 35/229 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYYD----------EEKHW 48 K Y K + + G N + + ++ + N +D +E Sbjct: 439 KWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLV 498 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDP 98 ++ + K + +++ + + Sbjct: 499 YNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRI 558 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N + + G G+NL +++V + W+ + + + R Sbjct: 559 QAIDDYNAPDSKKFVFLLTTRAGGLGINLTS-ADVVVLYDSDWNPQA-----DLQAMDRA 612 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN----ALKKE 201 + G K+ V V+ L+ N+++E +L+R K + L++ +LKK+ Sbjct: 613 HRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKK 661 >gi|38344264|emb|CAE02069.2| OSJNBa0005N02.1 [Oryza sativa Japonica Group] gi|38345412|emb|CAE03103.2| OSJNBa0017B10.18 [Oryza sativa Japonica Group] gi|116309716|emb|CAH66762.1| OSIGBa0158F05.11 [Oryza sativa Indica Group] Length = 863 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 64/165 (38%), Gaps = 19/165 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K +AL ++ + +++ + + L L+ G Sbjct: 680 TDEHVLGSAKCQALAELLPSLANDGHRVLIFSQWTTMLDILEWTLEVIGVTYRRLDGGTP 739 Query: 94 LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + +N + I + G GLNL G + ++ + ++ + ++R Sbjct: 740 VTERQTIVDTFNNDRSIFACLLSTRAGGQGLNL-IGADTVIIHDMDFNPQ-----MDRQA 793 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G ++ V +Y L+ + ++DE + + R K + +L + Sbjct: 794 EDRCHRIGQQKPVTIYRLVTKGSVDENIYEIARRKLVLDAAILQS 838 >gi|324499612|gb|ADY39837.1| Helicase ssl-1 [Ascaris suum] Length = 2737 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 74/208 (35%), Gaps = 24/208 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y K + D+ E+ + + +Q+ E E K++ L + Sbjct: 1349 AYQKQLAQERADICRRIFESDDPLVAKCRMMQM-----LQFPELRLIEYDCGKLQVLSSL 1403 Query: 63 IEKA--NAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK---------DPCTIQEWN-EGKI 109 + ++ + L G + ++ +N + KI Sbjct: 1404 LRDLFLYKHRCLIFTQMSRMLDVLQAFLSFHGYQYFRLDGTTGIEQRQAMMERFNSDPKI 1463 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G G+NL G + ++F+ W+ ++ R + G R V +Y Sbjct: 1464 FCFILSTRSGGIGVNLT-GADTVIFYDSDWNPT-----MDAQAQDRCHRIGQTRNVTIYR 1517 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI++ TI+E +L++ K + +L ++ Sbjct: 1518 LISERTIEENILKKAMQKRRLGELAIDE 1545 >gi|320038286|gb|EFW20222.1| helicase SWR1 [Coccidioides posadasii str. Silveira] Length = 1905 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 75/243 (30%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 K Q+EL L EA + +L N +E H + Sbjct: 1583 KKEQKELAKKLGSTEKEAKEHIFQALQYMRRLCNSPALVVKEGHRQYQEVQRYLANKNSN 1642 Query: 52 -----HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLAR---- 83 H K+ AL ++ + ++ L Sbjct: 1643 IRDISHAPKLTALRDLLIDCGIGVDPSAEGELNTAASYVSPHRALIFCQMKEMLDIVQND 1702 Query: 84 ---------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 K + ++N + +L + G GLNL G + ++ Sbjct: 1703 VLKKLLPSIQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVI 1761 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1762 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1816 Query: 194 LLN 196 ++N Sbjct: 1817 VVN 1819 >gi|253721987|gb|ACT34057.1| Mot1 [Aegilops tauschii] Length = 2051 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 86/261 (32%), Gaps = 67/261 (25%) Query: 1 MKQYHKF----QRELYCDLQGENIE---------AFNSASKTVKCLQLANGAVYYDEEKH 47 +K Y KF +E + + + L+L + + E Sbjct: 1719 LKLYDKFSSSNVKEEISTIVKADESEPSTSQPKATRHVFQALQYLLKLCSHPLLVIGESP 1778 Query: 48 WKEV-------------------HDEKIKALEVIIEKAN---------------AAPIIV 73 + H K+ AL+ I+++ +++ Sbjct: 1779 PDYIVEHLKEIGMGTGDELHELHHSPKLVALQEILQECGIGSEISSPDASAAVGQHRVLI 1838 Query: 74 AYHFNSDLARLQKAFPQGRTL-------------DKDPCTIQEWN-EGKIPLLFAHPASC 119 + L ++K Q DK ++ +N + I +L Sbjct: 1839 FAQHKAFLDIIEKDLFQSHMRSVTYLRLDGSVQTDKRFEIVKTFNSDPTIDVLLLTTHVG 1898 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + LVF W+ M + + R + G ++ V V+ LI + T++E Sbjct: 1899 GLGLNLTS-ADTLVFMEHDWNP-----MKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEK 1952 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R K ++ + ++N+ Sbjct: 1953 VMSLQRFKVSVANAVINSENA 1973 >gi|294925765|ref|XP_002778999.1| Chromodomain helicase-DNA-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239887845|gb|EER10794.1| Chromodomain helicase-DNA-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 1105 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 68/222 (30%), Gaps = 35/222 (15%) Query: 4 YHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYY-----DEEKHWKEVH----- 52 Y L G + + V+ + N E + Sbjct: 532 YRAIFERNKTYLSGAQKSGGPSLINLEVQLRKCCNHPFTIDGVEERELAMCQNKDQEFNR 591 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K + +++ F S L +Q+ + Sbjct: 592 MIMASGKMVLLDKLLPKLHAEGHKVLLFSQFLSMLDLIQRYALYRGYSVERLDGSATAKA 651 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + L + G G+NL ++++ F W+ + ++ Sbjct: 652 REEAIDRFNTPESSAFLFLLSTRAGGIGINLTA-ADVVIIFDSDWNPQ-----MDIQATA 705 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + V VY L+ T + + +R K I + + Sbjct: 706 RAHRIGQTKDVKVYRLVTNRTYEAQMFERASQKLGINEAVFQ 747 >gi|239608107|gb|EEQ85094.1| DNA repair and recombination protein RAD54 [Ajellomyces dermatitidis ER-3] Length = 795 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + + W + + Sbjct: 497 LKAIGLLKKLCNHPDLLNLGTDLPGSEQFFPDDYVPMECRGRDRDVRSWYSGKMMVLDRM 556 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L ++ + K + ++N+ Sbjct: 557 LARIRQDTNDKIVLISNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVDKFNDPNG 616 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 617 EEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 670 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 671 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 702 >gi|83764679|dbj|BAE54823.1| unnamed protein product [Aspergillus oryzae] Length = 1894 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 72/250 (28%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 K + F ++ L + + +L N ++ H + Sbjct: 1567 KLFEDFTKKEQKQLANKMGSSEKSDKEHIFQALQYMRRLCNSPALVVKDGHKQYDEVQQY 1626 Query: 52 ------------HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + ++ Sbjct: 1627 LHAKNSYIRDVAHAPKLSALRDLLLDCGIGVDPPSEGDLGTGASYVSPHRALIFCQMKEM 1686 Query: 81 LAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L K + +N + L + G GLNL Sbjct: 1687 LDIVQSEVLKKLLPSVQYLRLDGSVEATKRQDIVNRFNTDPSYDALLLTTSVGGLGLNLT 1746 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1747 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1800 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1801 KIDVASTVVN 1810 >gi|47206405|emb|CAG01534.1| unnamed protein product [Tetraodon nigroviridis] Length = 1491 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 74/222 (33%), Gaps = 38/222 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-----------YDEEKHWKE 50 + Y + G + + ++ + N + Y+E+ Sbjct: 766 RNYKALAK-------GTRGSSSGFLNIVMELKKCCNHSFLIKQPEDGETETYEEQLQAVV 818 Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DP 98 K+ L+ ++ + +++ L L + + R + Sbjct: 819 RGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTRKRYPFQRLDGSIKGEIRK 878 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL + +V F W+ + + R Sbjct: 879 QALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQARA 932 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 933 HRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRM 974 >gi|6319722|ref|NP_009804.1| Isw1p [Saccharomyces cerevisiae S288c] gi|2506238|sp|P38144|ISW1_YEAST RecName: Full=ISWI chromatin-remodeling complex ATPase ISW1 gi|1872131|emb|CAA85208.1| unnamed protein product [Saccharomyces cerevisiae] gi|285810576|tpg|DAA07361.1| TPA: Isw1p [Saccharomyces cerevisiae S288c] Length = 1129 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 77/229 (33%), Gaps = 35/229 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYYD----------EEKHW 48 K Y K + + G N + + ++ + N +D +E Sbjct: 439 KWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLV 498 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDP 98 ++ + K + +++ + + Sbjct: 499 YNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRI 558 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N + + G G+NL +++V + W+ + + + R Sbjct: 559 QAIDDYNAPDSKKFVFLLTTRAGGLGINLTS-ADVVVLYDSDWNPQA-----DLQAMDRA 612 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN----ALKKE 201 + G K+ V V+ L+ N+++E +L+R K + L++ +LKK+ Sbjct: 613 HRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKK 661 >gi|221120739|ref|XP_002163131.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 1024 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 81/224 (36%), Gaps = 37/224 (16%) Query: 7 FQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHWK 49 QR+ Y L ++I+ N A K ++ + N + Sbjct: 386 MQRQWYTKLLMKDIDIVNGAGKVDRMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDQHL 445 Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDK-D 97 + K+ L+++++K + + +++ Q G+T + Sbjct: 446 VDNCGKMIVLDMLLKKLKDSGSRVLIFSQMTRVLDILEDYAMWRGYQYCRLDGQTPHELR 505 Query: 98 PCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N + G G+NL ++++ + W+ + ++ R Sbjct: 506 TAQINEFNAPGSDKFLFMLSTRAGGLGINL-ATADVVIMYDNDWNPQ-----VDLQAQDR 559 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V V+ I +NTI+E +++R K + +++ + Sbjct: 560 AHRIGQTKQVHVFKFITENTIEERIIERAEIKLRLDAVVIQQGR 603 >gi|17136368|ref|NP_476661.1| okra [Drosophila melanogaster] gi|74960637|sp|O76460|RAD54_DROME RecName: Full=DNA repair and recombination protein RAD54-like; Short=DmRAD54; AltName: Full=Protein okra; AltName: Full=RAD54 DNA repair protein gi|3264618|gb|AAC24577.1| Rad54 homolog OKR [Drosophila melanogaster] gi|7295868|gb|AAF51168.1| okra [Drosophila melanogaster] gi|220947310|gb|ACL86198.1| okr-PA [synthetic construct] gi|220956782|gb|ACL90934.1| okr-PA [synthetic construct] Length = 784 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 42/224 (18%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------------- 52 R D + + + + ++ + E+ +E Sbjct: 434 VRRSLADCNEK--ASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPK 491 Query: 53 ------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K L+ ++ +++ ++ L ++ + Sbjct: 492 DLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMS 551 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIG 152 + K + +N+ + +S G L G N L F W+ + Sbjct: 552 IKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DEQA 606 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 607 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 650 >gi|198473012|ref|XP_001356143.2| GA17651 [Drosophila pseudoobscura pseudoobscura] gi|292630937|sp|Q29KH2|RAD54_DROPS RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|198139260|gb|EAL33203.2| GA17651 [Drosophila pseudoobscura pseudoobscura] Length = 782 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 77/238 (32%), Gaps = 50/238 (21%) Query: 1 MKQY------HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-- 52 ++ Y + +R L + + + + +L + E+ +E Sbjct: 419 LQLYTNFLKSDQVRRSLA---DCKEKASLTALADITTLKKLCSHPNLICEKIAAEEKGFE 475 Query: 53 --------------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK--- 86 K K L+ ++ +++ ++ L ++ Sbjct: 476 NSQNILPINYNPKGEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFEQLAR 535 Query: 87 -------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLW 138 ++ K + +N+ + +S G L G N L F Sbjct: 536 KRKYGFVRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNLIGANRLFMFDPD 595 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 596 WNPAN-----DEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 648 >gi|134114696|ref|XP_774056.1| hypothetical protein CNBH1020 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256686|gb|EAL19409.1| hypothetical protein CNBH1020 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1514 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 85/226 (37%), Gaps = 30/226 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------VHD 53 Y + + L + + + ++ + +N ++ + + ++ Sbjct: 696 YKNILTKNFAVLSKGGTQQVSLMNVAMELKKASNHPYLFEGAEDRSKPANEILRGLVMNS 755 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 K+ L++++ K++ +++ L + + + +I Sbjct: 756 GKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDIISDYMTARGYVHQRLDGTVPSDVRKKSI 815 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N P + G G+NL + ++ F ++ + + + R + Sbjct: 816 EHFNAPGSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDYNPQN-----DLQAMARAHRI 869 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G +R V ++ L+++ TI+E +L+R K ++ ++N + H+ Sbjct: 870 GQQRHVSIFRLVSKGTIEEDILERAMRKMLLEYAIINKMDTTGAHI 915 >gi|27819922|gb|AAL39744.2| LD35220p [Drosophila melanogaster] Length = 788 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 42/224 (18%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------------- 52 R D + + + + ++ + E+ +E Sbjct: 438 VRRSLADCNEK--ASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPK 495 Query: 53 ------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K L+ ++ +++ ++ L ++ + Sbjct: 496 DLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMS 555 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIG 152 + K + +N+ + +S G L G N L F W+ + Sbjct: 556 IKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DEQA 610 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 611 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 654 >gi|322710049|gb|EFZ01624.1| chromatin remodeling complex subunit (Chd3), putative [Metarhizium anisopliae ARSEF 23] Length = 1671 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 77/223 (34%), Gaps = 31/223 (13%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DE 54 + + ++ + + E + + ++ + Y E K Sbjct: 1043 QLIKAIFANSKMNKKERGSLNNILMQLRKCLCHPFMYSEAIEEKHDDPVVIHRNLVEASA 1102 Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQ 102 K+ LE ++ K +++ F L ++ + I Sbjct: 1103 KLLLLEQMLPKLKERGHRVLIFSQFLQQLDIVEDFLAGIGYQYRRLDGQLSSLEKQRRID 1162 Query: 103 EWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +NE I + G G+NL + ++ ++ + + ++R + G Sbjct: 1163 AFNEPGSAIFAFLLSTRAGGVGINL-ATADTVIIMDPDFNPHQ-----DIQALSRAHRIG 1216 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 K+ V + L+ ++T++E ++Q + K + L+ ++ + I Sbjct: 1217 QKQKVLCFQLMTKDTVEERIMQIGKKKMALDHALIESMDDDEI 1259 >gi|320039340|gb|EFW21274.1| SNF2 family domain-containing protein [Coccidioides posadasii str. Silveira] Length = 797 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 65/212 (30%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 499 LKAIGILKKLCNHPDLLNLSADLPGSEQLFPDDYVPPEGRGRDRDVKSWYSGKMMVLDRM 558 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K T+ K + +N+ Sbjct: 559 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDPDG 618 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 619 EEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 672 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K + ++++ + Sbjct: 673 YRFIATGSIEEKIFQRQSHKQLLSSCVVDSAE 704 >gi|310796552|gb|EFQ32013.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 878 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 67/209 (32%), Gaps = 28/209 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------KHWKEVHDEKIKAL 59 R + + + A + ++ + N + + K+ L Sbjct: 586 RAKISEQAKKEMSAKKLGNPDMQLRLVCNSPHNFFDPWSYEGAPPVDESIVTSSGKMLML 645 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNE 106 + ++ A +++ F + L LQ + + + Sbjct: 646 DRLLPTLFAKGHKVLIFSQFKTQLDILQDYCELRKWNACRLDGSVSQESRRDQIKEFNEN 705 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G G+NL + ++ F W+ ++ + R + G R V Sbjct: 706 PDFKIFLLSTRAGGQGINL-ASADTVILFDSDWNPQQ-----DLQAQDRCHRIGQTRPVI 759 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L + T++E +L K ++ L++ Sbjct: 760 VYRLATKGTVEEELLLSADAKRRLEKLII 788 >gi|156403967|ref|XP_001640179.1| predicted protein [Nematostella vectensis] gi|156227312|gb|EDO48116.1| predicted protein [Nematostella vectensis] Length = 1552 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y+ ++ G + + ++ ++ N + + H Sbjct: 899 LYNHMYKKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPFMFQHIEESIAEHLGFH 958 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNS-DLARLQKAFPQGRTLDK- 96 K + L+ I+ K N +++ S +G + Sbjct: 959 GGIVTGPDIYRASGKFELLDRILPKLKRNKHRVLMFCQMTSLMTILEDYFNWKGFPYLRL 1018 Query: 97 --------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +N P + + G GLNLQ + +V F W+ + Sbjct: 1019 DGTTKSEDRGQLLSLFNAKDSPYFVFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1074 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G ++ V V L+ N+++E +L R K + + ++ A Sbjct: 1075 --DLQAQDRAHRIGQEKEVRVLRLMTVNSVEEKILAAARYKLNVDEKVIQA 1123 >gi|119596383|gb|EAW75977.1| chromodomain helicase DNA binding protein 6, isoform CRA_d [Homo sapiens] Length = 1877 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 32 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 91 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 92 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 151 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 152 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 208 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 209 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 262 >gi|114662479|ref|XP_001165654.1| PREDICTED: chromodomain helicase DNA binding protein 9 isoform 2 [Pan troglodytes] Length = 2883 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1108 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1167 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1341 >gi|114662481|ref|XP_510966.2| PREDICTED: chromodomain helicase DNA binding protein 9 isoform 5 [Pan troglodytes] gi|114662483|ref|XP_001165616.1| PREDICTED: chromodomain helicase DNA binding protein 9 isoform 1 [Pan troglodytes] Length = 2882 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1108 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1167 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1341 >gi|115389990|ref|XP_001212500.1| DNA repair and recombination protein RAD54 [Aspergillus terreus NIH2624] gi|114194896|gb|EAU36596.1| DNA repair and recombination protein RAD54 [Aspergillus terreus NIH2624] Length = 821 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 523 LKAIGILKKLCNHPDLLNLSNDLPGCEHAFPDDYVPPEGRGRDRDIKSWYSGKMMVLDRM 582 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K + K + ++N+ Sbjct: 583 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVKKRQKLVDKFNDPDG 642 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 643 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 696 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 697 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 728 >gi|317138849|ref|XP_001816825.2| TBP associated factor (Mot1) [Aspergillus oryzae RIB40] Length = 1900 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 72/250 (28%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 K + F ++ L + + +L N ++ H + Sbjct: 1573 KLFEDFTKKEQKQLANKMGSSEKSDKEHIFQALQYMRRLCNSPALVVKDGHKQYDEVQQY 1632 Query: 52 ------------HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + ++ Sbjct: 1633 LHAKNSYIRDVAHAPKLSALRDLLLDCGIGVDPPSEGDLGTGASYVSPHRALIFCQMKEM 1692 Query: 81 LAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L K + +N + L + G GLNL Sbjct: 1693 LDIVQSEVLKKLLPSVQYLRLDGSVEATKRQDIVNRFNTDPSYDALLLTTSVGGLGLNLT 1752 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1753 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1806 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1807 KIDVASTVVN 1816 >gi|297698733|ref|XP_002826464.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9-like [Pongo abelii] Length = 2898 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1108 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1167 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1341 >gi|329663886|ref|NP_001192579.1| chromodomain-helicase-DNA-binding protein 9 [Bos taurus] gi|297485264|ref|XP_002694824.1| PREDICTED: kismet-like [Bos taurus] gi|296478067|gb|DAA20182.1| kismet-like [Bos taurus] Length = 2883 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1109 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1168 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1169 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1228 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1229 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1285 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1286 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1342 >gi|190348945|gb|EDK41499.2| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC 6260] Length = 814 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 67/215 (31%), Gaps = 42/215 (19%) Query: 26 ASKTVKCLQLANGAVY-----------------------YDEEKHWKEVHDEKIKALEVI 62 +L E + W ++ Sbjct: 524 LKAIGMLKKLCTHPELLRLPEEVSGSEDILPDDYESSGRDKEIRTWYSGKFAMLERFLHQ 583 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP-- 110 I I++ ++ L +++ ++K + +N+ + Sbjct: 584 IRTETDDKIVLISNYTQTLDLIERMCRYKRYQCCRLDGTMNINKRQKLVDRFNDPEGQEF 643 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL G N L+ W+ Q + R + G K+ F+Y Sbjct: 644 IFLLSSKAGGCGINL-IGANRLILLDPDWNPAADQ-----QALARVWRDGQKKDCFIYRF 697 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I+ TI+E + QR K ++ +++ K++ + Sbjct: 698 ISTGTIEEKIFQRQSMKLSLSSCVVDE-KEDVDRL 731 >gi|167375276|ref|XP_001739827.1| transcription regulatory protein SNF2 [Entamoeba dispar SAW760] gi|165896374|gb|EDR23803.1| transcription regulatory protein SNF2, putative [Entamoeba dispar SAW760] Length = 756 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 68/187 (36%), Gaps = 23/187 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKH----WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + ++ N ++ + K+K + ++++ ++ Sbjct: 393 LAAIDTLRKICNHPHLINKTEDLTPETIYKESSKLKYVCDLLKQFQKEGHKALIFCQTRQ 452 Query: 80 DLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 L +++ + + +K P I ++N + + + G G+NL G Sbjct: 453 MLNIIEQMMLNEKFKYLRMDGLVSSNKRPEYISQFNNDPTVLVFILTTRVGGLGINLT-G 511 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ + W+ ++ R + G R V +Y LI TI+E + Q+ K Sbjct: 512 ADRVIMYDPDWNPT-----VDSQAKERTLRIGQDRDVIIYRLICSGTIEEHIYQKQMAKE 566 Query: 189 TIQDLLL 195 + D +L Sbjct: 567 ILSDKIL 573 >gi|73998074|ref|XP_859321.1| PREDICTED: similar to helicase, lymphoid-specific isoform 5 [Canis familiaris] Length = 739 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 63/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 465 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKARGHKVLLFSQ 524 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + + +N + + + + G G+NL Sbjct: 525 MTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINL 584 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 585 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 638 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 639 AKRKLEKLIIH 649 >gi|260945000|ref|XP_002616798.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720] gi|238850447|gb|EEQ39911.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720] Length = 1259 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 77/227 (33%), Gaps = 37/227 (16%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 M+ Y + Y L + + + + +N +D + Sbjct: 449 MEYYRNIITKNYAALNAGVKGSQISLLNVMSELKKASNHPYLFDGAEERVLAKGGSTSRD 508 Query: 51 -------VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------G 91 + K+ LE ++ K +++ L L G Sbjct: 509 NVLKGLVMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRILDILGDYLSIKGYQFQRLDGG 568 Query: 92 RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + +I +N + + G G+NL + ++ F W+ + + Sbjct: 569 VPSAQRKISIDHFNSPDSKDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----D 622 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V VY ++++T++E +L+R R K ++ +++ Sbjct: 623 LQAMARAHRIGQKKHVSVYRFVSKDTVEEEILERARKKMILEYAIIS 669 >gi|22775414|dbj|BAC11858.1| recombinational repair protein [Magnaporthe grisea] Length = 803 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N E K W + + + Sbjct: 509 LKAIGILKKLCNHPDLLNLSDDLPGSEAHWPSDYVPKESRGRDREIKPWYSGKMQVLDRM 568 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I I++ ++ S L ++ + K + ++N+ + Sbjct: 569 LARIRADTNDKIVLISNYTSTLDLFERLCRNRGYGSLRLDGTMNVTKRQKLVDKFNDPEG 628 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 629 SEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 682 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 683 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 714 >gi|258576739|ref|XP_002542551.1| hypothetical protein UREG_02067 [Uncinocarpus reesii 1704] gi|237902817|gb|EEP77218.1| hypothetical protein UREG_02067 [Uncinocarpus reesii 1704] Length = 1870 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 75/250 (30%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 K + F ++ +L + + +L N +E H + Sbjct: 1541 KLFEDFTKKEQKELAKKIGSTEKEAKEHIFQALQYMRRLCNSPALVVKEGHRQYPEVQKY 1600 Query: 52 ------------HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + ++ Sbjct: 1601 LSDKRSNIRDISHAPKLTALRDLLIDCGIGVDPSTEGELTTAASYVSPHRALIFCQMKEM 1660 Query: 81 LAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L K + ++N + +L + G GLNL Sbjct: 1661 LDIVQNDVLKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1720 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1721 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1774 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1775 KIDVASTVVN 1784 >gi|118781335|ref|XP_311417.3| AGAP010700-PA [Anopheles gambiae str. PEST] gi|116130122|gb|EAA07020.3| AGAP010700-PA [Anopheles gambiae str. PEST] Length = 1026 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY--------DEEKHW 48 K QRE Y + ++I+ N A K ++ + N + + Sbjct: 367 KMQREWYTKILMKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDYH 426 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDK 96 + K+ L+ ++ + + +++ L L+ + Sbjct: 427 LLENAGKMVVLDKLLRKLQEQDSRVLIFSQMTRMLDILEDFCHWRGYQYCRLDGQTPHED 486 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I ++N + + G G+NL ++++ + W+ + ++ + Sbjct: 487 RSNMIADYNAENSTKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 540 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI +NT++E +++R K + L++ + Sbjct: 541 RAHRIGQKKQVRVFRLITENTVEEKIVERAEVKLKLDKLVIQQGR 585 >gi|317418651|emb|CBN80689.1| Chromodomain-helicase-DNA-binding protein 5 [Dicentrarchus labrax] Length = 1981 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 23/222 (10%), Positives = 59/222 (26%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 K Y + L + + + + N + V Sbjct: 941 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGN 1000 Query: 52 ------HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + + K +++ L L+ + Sbjct: 1001 LLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGG 1060 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1061 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ASADTVIIYDSDWNP-----HNDIQAF 1114 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1115 SRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVV 1156 >gi|281346617|gb|EFB22201.1| hypothetical protein PANDA_000001 [Ailuropoda melanoleuca] Length = 2901 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1110 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1169 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1170 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1229 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1230 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1286 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1287 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1343 >gi|213406021|ref|XP_002173782.1| ATP-dependent helicase RIS1 [Schizosaccharomyces japonicus yFS275] gi|212001829|gb|EEB07489.1| ATP-dependent helicase RIS1 [Schizosaccharomyces japonicus yFS275] Length = 867 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 57/166 (34%), Gaps = 21/166 (12%) Query: 51 VHDEKIKALEVIIE----KANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLD 95 V KI++ ++ + I++ F L R Sbjct: 692 VPSSKIQSAIELVRRIRTEQPGEKILIFSQFTQFLELLSVPLQREGIRFVVYDGSMSASQ 751 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +D + ++ + ++ + GLNL N +V +++ +E + R Sbjct: 752 RDEAIHRFQHKESVQVMLVSLKAGSTGLNLTA-ANHVVLLDPFYNPS-----VEEQAIDR 805 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V VY +I ++I+E + K + + ++ Sbjct: 806 AYRIGQKREVHVYRMITADSIEERIAALQEKKRGLVRSAMAEDERR 851 >gi|195435389|ref|XP_002065674.1| GK15573 [Drosophila willistoni] gi|292630875|sp|B4MX21|RAD54_DROWI RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|194161759|gb|EDW76660.1| GK15573 [Drosophila willistoni] Length = 784 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 72/224 (32%), Gaps = 42/224 (18%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------------- 52 R D + + + + +L + E+ ++ Sbjct: 432 VRRSLADCNEK--ASLTALADITTLKKLCSHPDLIYEKMLARDKGFENSQNILPTNYKPK 489 Query: 53 ------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K L+ ++ + +++ ++ L ++ T Sbjct: 490 DLNPELSGKFMLLDFMLATIRANSDDKVVLISNYTQTLDLFEQLARKRKYTFVRLDGTMT 549 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIG 152 + K + +N+ + +S G L G N L F W+ + Sbjct: 550 IKKRSKVVDRFNDPENDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DEQA 604 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 605 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 648 >gi|119603201|gb|EAW82795.1| chromodomain helicase DNA binding protein 9, isoform CRA_c [Homo sapiens] Length = 2349 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 576 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 635 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 636 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 695 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 696 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 752 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 753 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 809 >gi|207345444|gb|EDZ72265.1| YGL150Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 534 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K++ L+ ++ K + +++ + + +++ + + Sbjct: 343 SAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 402 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 403 VHDWQTNPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 456 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V VY L+ + TI+E + R + K +Q +++ +E Sbjct: 457 GQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQE 498 >gi|50290001|ref|XP_447432.1| hypothetical protein [Candida glabrata CBS 138] gi|49526742|emb|CAG60369.1| unnamed protein product [Candida glabrata] Length = 942 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 74/217 (34%), Gaps = 44/217 (20%) Query: 26 ASKTVKCLQLANGA----------------------VYYDEEKHWKEVHDEKIKALEVII 63 +L N + + + + K LE + Sbjct: 649 LKAIGVLKKLCNHPDLIKLDEELDNYNDLDIPDDYSIPTGKSRDVQTQFSGKFAILERFL 708 Query: 64 EK---ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP 110 K + I++ ++ L +++ +++K + +N+ + Sbjct: 709 HKIKTESDDKIVLISNYTQTLDLIERMCRNRHYASVRLDGTMSINKRQKLVDRFNDPEGQ 768 Query: 111 --LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL G N L+ W+ Q + R + G K+ F+Y Sbjct: 769 EFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQ-----QALARVWRDGQKKDCFIY 822 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I+ TI+E + QR K ++ +++A K++ + Sbjct: 823 RFISTGTIEEKIYQRQSMKMSLSSCVVDA-KEDVERL 858 >gi|74181165|dbj|BAE27845.1| unnamed protein product [Mus musculus] Length = 1510 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 988 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1047 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1048 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1107 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1108 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1163 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1164 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1212 >gi|194881876|ref|XP_001975047.1| GG22110 [Drosophila erecta] gi|190658234|gb|EDV55447.1| GG22110 [Drosophila erecta] Length = 3193 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 68/183 (37%), Gaps = 19/183 (10%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ 85 K + + + + K++ ++ ++ + N +++ L L+ Sbjct: 1631 KLGLLHPITSAMTTQFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLE 1690 Query: 86 KAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + ++ +N + +I S G G+NL G + ++F Sbjct: 1691 AFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADTVIF 1749 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ ++ R + G R V +Y L+++ TI+ +L++ K + D+ Sbjct: 1750 YDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMA 1804 Query: 195 LNA 197 + Sbjct: 1805 IEG 1807 >gi|326931681|ref|XP_003211955.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Meleagris gallopavo] Length = 2658 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 703 KYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 762 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 763 EAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 822 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 823 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 879 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 880 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 933 >gi|316971517|gb|EFV55276.1| DNA excision repair protein ERCC-6 [Trichinella spiralis] Length = 1202 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 60/189 (31%), Gaps = 25/189 (13%) Query: 32 CLQLANGAVYY--------DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 +L N +E +++ + + + K I++ L Sbjct: 398 LRKLCNHPDLVSRAVGENSNEFGYFRRSGKMIVLHSLLKLWKQENHRILLFSQSRQMLNI 457 Query: 84 LQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNIL 132 L+ + + +N I +L G GL+L G + + Sbjct: 458 LEDFLKKRNYAHLRMDGTTAVGSRQSIVTTFNENADIFVLLLTTRVGGLGLDLT-GADRV 516 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + W+ + R + G V VY L++ T++E + R K + + Sbjct: 517 ILYDPDWNPTT-----DAQAQERAWRLGQTSDVVVYRLVSSGTVEEKIYHRQIFKQFLMN 571 Query: 193 LLLNALKKE 201 +L ++ Sbjct: 572 RVLRNSRQR 580 >gi|215273951|sp|Q3L8U1|CHD9_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 9; Short=CHD-9; AltName: Full=ATP-dependent helicase CHD9; AltName: Full=Chromatin-related mesenchymal modulator; Short=CReMM; AltName: Full=Chromatin-remodeling factor CHROM1; AltName: Full=Kismet homolog 2; AltName: Full=PPAR-alpha-interacting complex protein 320 kDa; AltName: Full=Peroxisomal proliferator-activated receptor A-interacting complex 320 kDa protein gi|187954623|gb|AAI40816.1| CHD9 protein [Homo sapiens] Length = 2897 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1108 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1167 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1341 >gi|218195384|gb|EEC77811.1| hypothetical protein OsI_17009 [Oryza sativa Indica Group] Length = 909 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 64/165 (38%), Gaps = 19/165 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K +AL ++ + +++ + + L L+ G Sbjct: 680 TDEHVLGSAKCQALAELLPSLANDGHRVLIFSQWTTMLDILEWTLEVIGVTYRRLDGGTP 739 Query: 94 LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + +N + I + G GLNL G + ++ + ++ + ++R Sbjct: 740 VTERQTIVDTFNNDRSIFACLLSTRAGGQGLNL-IGADTVIIHDMDFNPQ-----MDRQA 793 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G ++ V +Y L+ + ++DE + + R K + +L + Sbjct: 794 EDRCHRIGQQKPVTIYRLVTKGSVDENIYEIARRKLVLDAAILQS 838 >gi|33641444|gb|AAQ24287.1| chromatin remodeling factor CHROM1 [Homo sapiens] gi|219521584|gb|AAI44623.1| CHD9 protein [Homo sapiens] Length = 2897 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1108 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1167 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1341 >gi|293347259|ref|XP_001054095.2| PREDICTED: similar to RAD54B homolog isoform 1; RAD54, S. cerevisiae, homolog of, B [Rattus norvegicus] Length = 888 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 72/248 (29%), Gaps = 55/248 (22%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 ++ Y K + + +L N KE + + + Sbjct: 536 IELYRKLLSSQSVRFCLQGLLGNSAHLICIGALKKLCNHPRLLFSFVKGKEFNSSRDENE 595 Query: 60 EVIIEK------------------------------------ANAAPIIVAYHFNSDLAR 83 E + + +I+ ++ L Sbjct: 596 ERSLCQGLLTVFPAGYNLLQLSESESGKLQVLVKLLAAISELRPTEKVILVSNYRQTLNL 655 Query: 84 LQKAFPQG----------RTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNI 131 L++ + + + +N + + G GLNL GG+ Sbjct: 656 LEEVCKCHGYACARLDGQTPVSQRQQIVDNFNSKYSTDFIFLLSSKAGGVGLNL-IGGSH 714 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + + R + G K V VY L+ TI+E + QR +K + Sbjct: 715 LILYDIDWNPAT-----DIQAMARVWRDGQKHPVHVYRLLTTGTIEEKIYQRQISKQGLS 769 Query: 192 DLLLNALK 199 +++ + Sbjct: 770 GAVVDLTR 777 >gi|151945386|gb|EDN63629.1| ATPase component of a two subunit chromatin remodeling complex [Saccharomyces cerevisiae YJM789] Length = 1120 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 80/224 (35%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEK 46 Q + Y L ++I+A N A ++ + N + Sbjct: 423 DMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ +++ K + +++ + L L+ + Sbjct: 483 EHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSH 542 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I E+N+ + + G G+NL + ++ F W+ + + Sbjct: 543 EERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVT-ADTVILFDSDWNPQA-----DLQA 596 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V VY + +N I+E V++R K + L++ Sbjct: 597 MDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640 >gi|297283992|ref|XP_002808345.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9-like [Macaca mulatta] Length = 2901 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1108 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDAYNP 1167 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1341 >gi|291408167|ref|XP_002720326.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1-like isoform 1 [Oryctolagus cuniculus] Length = 1053 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 52/245 (21%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 412 IKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 471 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 + K+ L+ ++ K + +++ L L+ Sbjct: 472 PPYTTDEHIVNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRL 531 Query: 96 -------------------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 I+ +N + + G G+NL ++++ Sbjct: 532 DGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSKFIFMLSTRAGGLGINL-ASADVVIL 590 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + ++ + R + G K+ V V+ LI NT++E +++R K + ++ Sbjct: 591 YDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 645 Query: 195 LNALK 199 + + Sbjct: 646 IQQGR 650 >gi|224104242|ref|XP_002313369.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222849777|gb|EEE87324.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1748 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 27/231 (11%), Positives = 74/231 (32%), Gaps = 36/231 (15%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKH------------- 47 + Y + DL + + V+ + N ++ H Sbjct: 856 QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDISTNDSSK 915 Query: 48 --WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 + K+ L+ ++ + + +++ L + + + Sbjct: 916 LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDIIAQYMSLRGFQFQRLDGSTK 975 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N + G G+NL + ++ F W+ + + Sbjct: 976 AELRQQAMEHFNAPGSDDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQ 1029 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1030 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEG 1080 >gi|118083556|ref|XP_416595.2| PREDICTED: similar to MGC81081 protein [Gallus gallus] Length = 1178 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 65/243 (26%), Gaps = 69/243 (28%) Query: 22 AFNSASKTVKCLQLANGAVYY--------------------------------------- 42 + S ++ Q Sbjct: 929 TAHVLSMLLRLRQCCCHLSLLKVALDQANLANEGLSLSIEEQLSALTLSELQTPDSKSTV 988 Query: 43 -----------DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA--------- 82 E + L+ I + +V + S L Sbjct: 989 YLNGTAFNTDLFEISKESTKVSHLLAELKTIQSCSETEKSVVVSQWTSMLKVVAVHLQRL 1048 Query: 83 -RLQKAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++E+N ++ + G GLNL GGN L + W Sbjct: 1049 GLKYSMLDGSVNPKQRMDVVEEFNNNPKGPQVMLVSLLAGGVGLNLT-GGNHLFLLDMHW 1107 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + Q +RI + G K+ V ++ + + T++E +LQ K + +L A K Sbjct: 1108 NPALEDQACDRI-----YRVGQKKDVVIHRFVCEGTVEEKILQLQTRKKGLAQQVL-AGK 1161 Query: 200 KET 202 ET Sbjct: 1162 GET 1164 >gi|114631873|ref|XP_001151526.1| PREDICTED: helicase, lymphoid-specific isoform 14 [Pan troglodytes] Length = 923 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 610 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 669 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 670 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 729 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 730 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 783 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 784 AKRKLEKLIIH 794 >gi|148710305|gb|EDL42251.1| mCG18716, isoform CRA_b [Mus musculus] Length = 2582 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 72/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L + N + ++ + N + + + Sbjct: 1061 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHI 1120 Query: 52 ------------HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 1121 IPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1180 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1181 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1237 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1238 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1290 >gi|58271342|ref|XP_572827.1| transcription regulator [Cryptococcus neoformans var. neoformans JEC21] gi|57229086|gb|AAW45520.1| transcription regulator, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1519 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 85/226 (37%), Gaps = 30/226 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------VHD 53 Y + + L + + + ++ + +N ++ + + ++ Sbjct: 701 YKNILTKNFAVLSKGGTQQVSLMNVAMELKKASNHPYLFEGAEDRSKPANEILRGLVMNS 760 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 K+ L++++ K++ +++ L + + + +I Sbjct: 761 GKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDIISDYMTARGYVHQRLDGTVPSDVRKKSI 820 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N P + G G+NL + ++ F ++ + + + R + Sbjct: 821 EHFNAPGSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDYNPQN-----DLQAMARAHRI 874 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G +R V ++ L+++ TI+E +L+R K ++ ++N + H+ Sbjct: 875 GQQRHVSIFRLVSKGTIEEDILERAMRKMLLEYAIINKMDTTGAHI 920 >gi|73949862|ref|XP_863483.1| PREDICTED: similar to chromodomain helicase DNA binding protein 9 isoform 4 [Canis familiaris] Length = 2886 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1110 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1169 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1170 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1229 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1230 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1286 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1287 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1343 >gi|119392064|ref|NP_963999.2| chromodomain-helicase-DNA-binding protein 8 [Mus musculus] gi|123778258|sp|Q09XV5|CHD8_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 8; Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8; AltName: Full=Axis duplication inhibitor; Short=Duplin gi|77744590|gb|ABB02259.1| chromodomain helicase DNA binding protein 8 [Mus musculus] Length = 2582 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 72/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L + N + ++ + N + + + Sbjct: 1061 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHI 1120 Query: 52 ------------HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 1121 IPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1180 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1181 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1237 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1238 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1290 >gi|326912863|ref|XP_003202765.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Meleagris gallopavo] Length = 861 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 24/215 (11%), Positives = 69/215 (32%), Gaps = 26/215 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHDE 54 K Y + +G + + + ++ E Sbjct: 257 KYYKAILTKDLDAFEGGTGRKVTLQNVLTQLRKCVAHPYLFNGVEPEPFEIGDHIIEASG 316 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ +++ L LQ ++ I+ Sbjct: 317 KLCLLDKLLSFLYDGGHRVLLFSQMTKLLDILQDYMDYRGYSYERLDGSVRGEERHLAIK 376 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G+NL + ++F ++ + + + R + G Sbjct: 377 NFGQQPIFVFLLSTRAG-VGMNLTA-ADTVIFTDSDFNPQN-----DLQAIARAHRIGQH 429 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V + LI ++T++E++ +R +K + + ++ Sbjct: 430 KPVKIIRLIGRDTVEEIIYRRAASKLRLTNAIVEG 464 >gi|258570331|ref|XP_002543969.1| rad8 protein [Uncinocarpus reesii 1704] gi|237904239|gb|EEP78640.1| rad8 protein [Uncinocarpus reesii 1704] Length = 979 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 61/166 (36%), Gaps = 21/166 (12%) Query: 53 DEKIKALEVIIEKAN----AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------- 97 KI+ I+ + I+ F + L L+ + + Sbjct: 802 SAKIEKTLEILRETETRGEGEKTIIFSQFTTLLDLLEVPIMKEGWKYRRYDGSMSPIQRN 861 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + ++ + GLNL + ++ F +W+ IE + R Sbjct: 862 EAVLEFTDSQDCKIMLVSLKAGNAGLNLVA-ASQVIIFDPFWNP-----YIEEQAIDRAH 915 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G R V V+ ++ +NT+++ +L+ K + + L+ +++ Sbjct: 916 RIGQTRPVIVHRILVENTVEDRILELQEQKRELIENALDEKASKSL 961 Score = 35.1 bits (79), Expect = 6.4, Method: Composition-based stats. Identities = 4/41 (9%), Positives = 9/41 (21%), Gaps = 2/41 (4%) Query: 14 DLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVH 52 L + A + ++ Q V+ Sbjct: 571 YLDAGTVGAHYSSVLVMLLRLRQACCHPHLIQFFNDDNNVN 611 >gi|238504030|ref|XP_002383247.1| TBP associated factor (Mot1), putative [Aspergillus flavus NRRL3357] gi|220690718|gb|EED47067.1| TBP associated factor (Mot1), putative [Aspergillus flavus NRRL3357] Length = 1663 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 72/250 (28%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQGENIE-----AFNSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 K + F ++ L + + +L N ++ H + Sbjct: 1336 KLFEDFTKKEQKQLANKMGSSEKSDKEHIFQALQYMRRLCNSPALVVKDGHKQYDEVQQY 1395 Query: 52 ------------HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + ++ Sbjct: 1396 LHAKNSYIRDVAHAPKLSALRDLLLDCGIGVDPPSEGDLGTGASYVSPHRALIFCQMKEM 1455 Query: 81 LAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L K + +N + L + G GLNL Sbjct: 1456 LDIVQSEVLKKLLPSVQYLRLDGSVEATKRQDIVNRFNTDPSYDALLLTTSVGGLGLNLT 1515 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1516 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1569 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1570 KIDVASTVVN 1579 >gi|119570417|gb|EAW50032.1| helicase, lymphoid-specific, isoform CRA_g [Homo sapiens] Length = 873 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 564 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 623 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 624 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 683 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 684 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 737 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 738 AKRKLEKLIIH 748 >gi|119603200|gb|EAW82794.1| chromodomain helicase DNA binding protein 9, isoform CRA_b [Homo sapiens] Length = 2785 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1108 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1167 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1341 >gi|73998080|ref|XP_859428.1| PREDICTED: similar to helicase, lymphoid-specific isoform 8 [Canis familiaris] Length = 805 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 63/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 531 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKARGHKVLLFSQ 590 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + + +N + + + + G G+NL Sbjct: 591 MTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINL 650 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 651 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 704 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 705 AKRKLEKLIIH 715 >gi|46108786|ref|XP_381451.1| hypothetical protein FG01275.1 [Gibberella zeae PH-1] Length = 1023 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 70/172 (40%), Gaps = 19/172 (11%) Query: 43 DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDL----------ARLQKAFPQ 90 + E+ K++ L +I + N ++V F+ + + Sbjct: 833 FDIPPEAEMDSGKVRKLLELINHYQENGDRVLVFSKFSRVIELLQEVLAQQQIQHRVLMG 892 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+++ I E+N + IP+ + G G+NL N ++ F + ++ + Sbjct: 893 STTVEERQTLIDEFNEDSDIPVFLLTTGAGGTGINLTA-ANKVIIFDQSDNPQD-----D 946 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G KR V + LIA NTI+EL+ + + K + + + A+ E Sbjct: 947 IQAENRAHRLGQKRDVEIIRLIATNTIEELIYKACQKKIELANKVTGAVADE 998 >gi|197251949|ref|NP_075222.2| chromodomain-helicase-DNA-binding protein 8 [Rattus norvegicus] gi|226706290|sp|Q9JIX5|CHD8_RAT RecName: Full=Chromodomain-helicase-DNA-binding protein 8; Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8; AltName: Full=Axis duplication inhibitor; Short=Duplin gi|149033674|gb|EDL88472.1| chromodomain helicase DNA binding protein 8, isoform CRA_a [Rattus norvegicus] Length = 2581 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 72/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L + N + ++ + N + + + Sbjct: 1059 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHI 1118 Query: 52 ------------HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 1119 IPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1178 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1179 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1235 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1236 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1288 >gi|73946635|ref|XP_860206.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 16 [Canis familiaris] Length = 1552 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 74/225 (32%), Gaps = 36/225 (16%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + + + Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEVMVDPYWFVT 1022 Query: 53 ------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 K + L+ I+ K A +++ S + ++ F Sbjct: 1023 GVLYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKS 1082 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++NE + + G GLNLQ + +V F W+ + + Sbjct: 1083 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQA 1136 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1181 >gi|114662475|ref|XP_001165675.1| PREDICTED: chromodomain helicase DNA binding protein 9 isoform 3 [Pan troglodytes] gi|114662477|ref|XP_001165704.1| PREDICTED: chromodomain helicase DNA binding protein 9 isoform 4 [Pan troglodytes] Length = 2898 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1108 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1167 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1341 >gi|114631877|ref|XP_001151592.1| PREDICTED: helicase, lymphoid-specific isoform 15 [Pan troglodytes] Length = 877 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 564 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 623 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 624 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 683 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 684 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 737 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 738 AKRKLEKLIIH 748 >gi|74177549|dbj|BAB31000.3| unnamed protein product [Mus musculus] Length = 559 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 70/175 (40%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG + + K+ AL+V++ K+ +++ + L++ Sbjct: 337 NGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKH 396 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ I + + G G+NL + ++F+ W+ Sbjct: 397 TYMRLDGSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 455 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 456 -----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 505 >gi|71022005|ref|XP_761233.1| hypothetical protein UM05086.1 [Ustilago maydis 521] gi|46097644|gb|EAK82877.1| hypothetical protein UM05086.1 [Ustilago maydis 521] Length = 1834 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 80/221 (36%), Gaps = 30/221 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------V 51 + Y Y L G F+ + ++ + +N +D + + + Sbjct: 825 RMYKAILTRNYSLLSGATTAQFSLLNIAIELKKASNHPYLFDGTEIISDNREETLKGLVM 884 Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDK---------DPC 99 H K+ L+ ++ KA+ +++ L +G + Sbjct: 885 HSGKMVLLDKLLARLKADGHRVLIFSQMVRMLDILSDYMSLRGYIHQRLDGTVSSEIRKK 944 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ +N P + G G+NL + ++ F W+ + + + R Sbjct: 945 AIEHFNAEGSPDFAFLLSTRAGGLGINL-ETADTVIIFDSDWNPQN-----DLQAMARAH 998 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + K V V+ + ++T++E VL+R + K ++ +++ + Sbjct: 999 RLNSKFHVSVFRFLTKDTVEEDVLERAKRKMVLEYAIIHQM 1039 >gi|291409634|ref|XP_002721122.1| PREDICTED: chromodomain helicase DNA binding protein 6 [Oryctolagus cuniculus] Length = 2717 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 707 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 766 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 767 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 826 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 827 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 883 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 884 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 937 >gi|330803796|ref|XP_003289888.1| hypothetical protein DICPUDRAFT_154353 [Dictyostelium purpureum] gi|325079999|gb|EGC33573.1| hypothetical protein DICPUDRAFT_154353 [Dictyostelium purpureum] Length = 1851 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 32/225 (14%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + +L E + + + N Y+ K E + + Sbjct: 965 KYYKWILTKNFQELNKGVKGEKTTLLNIMTELKKTCNHPYLYESAKEECEQNAKDPLEAM 1024 Query: 61 -------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---------- 97 ++ K +++ L L + + Sbjct: 1025 IKASGKLVLLDKLLVRLKETGHRVLIFSQMVRMLDILAEYLKGRSFCFQRLDGSMSRENR 1084 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N P + G G+NL + +V F W+ + + R Sbjct: 1085 SKAMDRFNAVDSPDFCFLLSTKAGGLGINL-STADTVVIFDSDWNPQN-----DLQAEAR 1138 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K V +Y L+++ +++E +L+R + K + L++ ++K Sbjct: 1139 AHRIGQKNHVNIYRLVSKKSVEEDILERAKQKMVLDHLVIQTMEK 1183 >gi|195025748|ref|XP_001986118.1| GH20710 [Drosophila grimshawi] gi|193902118|gb|EDW00985.1| GH20710 [Drosophila grimshawi] Length = 3285 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 71/193 (36%), Gaps = 19/193 (9%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAY 75 E A + K + + + + K++ ++ ++ + + +++ Sbjct: 1673 EETIAQTVSPKLTLLHPIISAMTTQFPDPRLIQYDCGKLQTMDRLLRQLKVDGHRVLIFT 1732 Query: 76 HFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 L L+ + + ++ +N + +I S G G+N Sbjct: 1733 QMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGIN 1792 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + ++F+ W+ ++ R + G R V +Y L+++ TI+ +L++ Sbjct: 1793 LT-GADTVIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTIEVNILKKA 1846 Query: 185 RTKSTIQDLLLNA 197 K + D+ + Sbjct: 1847 NQKRMLSDMAIEG 1859 >gi|300795783|ref|NP_001178684.1| RAD54 homolog B [Rattus norvegicus] Length = 888 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 72/248 (29%), Gaps = 55/248 (22%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 ++ Y K + + +L N KE + + + Sbjct: 536 IELYRKLLSSQSVRFCLQGLLGNSAHLICIGALKKLCNHPRLLFSFVKGKEFNSSRDENE 595 Query: 60 EVIIEK------------------------------------ANAAPIIVAYHFNSDLAR 83 E + + +I+ ++ L Sbjct: 596 ERSLCQGLLTVFPAGYNLLQLSESESGKLQVLVKLLAAISELRPTEKVILVSNYRQTLNL 655 Query: 84 LQKAFPQG----------RTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNI 131 L++ + + + +N + + G GLNL GG+ Sbjct: 656 LEEVCKCHGYACARLDGQTPVSQRQQIVDNFNSKYSTDFIFLLSSKAGGVGLNL-IGGSH 714 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + + R + G K V VY L+ TI+E + QR +K + Sbjct: 715 LILYDIDWNPAT-----DIQAMARVWRDGQKHPVHVYRLLTTGTIEEKIYQRQISKQGLS 769 Query: 192 DLLLNALK 199 +++ + Sbjct: 770 GAVVDLTR 777 >gi|301114327|ref|XP_002998933.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4] gi|262111027|gb|EEY69079.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4] Length = 1052 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 18/151 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQ-KAFPQGRTLDK---------DPCTIQEWNEGKIPLL 112 + K ++V S L L+ G + + +N L Sbjct: 618 LWKEQKHRVLVFTQTRSMLDILESFMSRLGHACTRLDGTTGVAERQQRLDAFNAPDSNLF 677 Query: 113 --FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G + +V F W+ + R + G ++ V VY L Sbjct: 678 AFLLTTRAGGIGVNL-VGADRVVVFDPDWNPST-----DVQARERAWRIGQQKPVTVYRL 731 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+E + R K + +L+ K++ Sbjct: 732 VTAGTIEEKIYHRQIFKQYLTSKVLHDAKRK 762 >gi|126277336|ref|XP_001368949.1| PREDICTED: similar to chromodomain helicase DNA binding protein 8 [Monodelphis domestica] Length = 2591 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 1058 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 1117 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 1118 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1177 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1178 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1234 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1235 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1287 >gi|259149779|emb|CAY86583.1| Isw2p [Saccharomyces cerevisiae EC1118] Length = 1121 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 80/224 (35%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEK 46 Q + Y L ++I+A N A ++ + N + Sbjct: 423 DMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ +++ K + +++ + L L+ + Sbjct: 483 EHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSH 542 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I E+N+ + + G G+NL + ++ F W+ + + Sbjct: 543 EERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVT-ADTVILFDSDWNPQA-----DLQA 596 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V VY + +N I+E V++R K + L++ Sbjct: 597 MDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640 >gi|154420998|ref|XP_001583513.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] gi|121917755|gb|EAY22527.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] Length = 1468 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 61/195 (31%), Gaps = 31/195 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEK--ANAAPIIVA 74 ++ ++ N + + K+ ++ ++ K +++ Sbjct: 586 LAMQLRKVCNHPYLFPNVEEEIVKPGEDPNEAMINASGKLVFVDKLLAKLRPKGDKVLIF 645 Query: 75 YHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEG--KIPLLFAHPASCGHG 122 L L++ +I ++N+ I + + G G Sbjct: 646 SQMVHVLDILEEYLHYRNYPYVRLDGSVVGDVRQESIDKFNDPEKDIFVFLLCTRAGGVG 705 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL ++ + W+ + + R + G V VY LI + T + + Sbjct: 706 LNLTA-ATNVIIYDSDWNPQN-----DLQAQARCHRIGQTHDVKVYRLITRGTYESDMFT 759 Query: 183 RLRTKSTIQDLLLNA 197 R K + +L++ Sbjct: 760 RASMKLGLDQAILDS 774 >gi|114682043|ref|XP_001147951.1| PREDICTED: chromodomain helicase DNA binding protein 6 isoform 1 [Pan troglodytes] Length = 2228 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 222 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 281 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 282 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 341 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 342 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 398 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 399 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 452 >gi|119181658|ref|XP_001242026.1| hypothetical protein CIMG_05922 [Coccidioides immitis RS] Length = 835 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 74/214 (34%), Gaps = 26/214 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------HDEKIKA 58 + +R L + I + + ++ N + + K+ Sbjct: 539 EIERAKTMKLAKKEIASKKLQNPIMQARLACNSPHNFYWPWDEESDIDESLVTASGKMLL 598 Query: 59 LEVIIEK--ANAAPIIVAYHFN------SDLARLQKAFPQ----GRTLDKDPCTIQEWN- 105 L+ ++ + +++ F D A L+ + I +N Sbjct: 599 LDRLVPCLLSKGHKVLIFSQFKTQLDILQDWAYLRNWNCCRIDGAVSQADRQAQINAFNA 658 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G G+NL + ++ + W+ ++ + R + G + V Sbjct: 659 DPDYKIFLLSTRAGGLGINLTA-ADTVILYDSDWNPQQ-----DLQAQDRAHRIGQTKPV 712 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L + T+++ +L+R +K ++ L++ K Sbjct: 713 IVYRLATRGTVEQTLLERADSKRRLEKLVIQKGK 746 >gi|73949856|ref|XP_535304.2| PREDICTED: similar to chromodomain helicase DNA binding protein 9 isoform 1 [Canis familiaris] Length = 2903 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1110 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1169 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1170 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1229 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1230 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1286 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1287 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1343 >gi|71891786|dbj|BAA20767.3| KIAA0308 [Homo sapiens] Length = 2759 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 985 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1044 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1045 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1104 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1105 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1161 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1162 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1218 >gi|312213639|emb|CBX93641.1| similar to ISWI chromatin-remodeling complex ATPase ISW2 [Leptosphaeria maculans] Length = 1310 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 27/227 (11%), Positives = 65/227 (28%), Gaps = 39/227 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS------KTVKCLQLANGAVYY-------DEEKHWKEVH 52 + R Q + A + ++ + + Sbjct: 636 EIMRATIAKEQESSDSAPTKGAWMKLMNLVMQLRKCCSHPYLLPGVAPDPYYLGDHIIRG 695 Query: 53 DEKIKALEVIIEK---ANAAPIIVAYHFNSDLAR---------------LQKAFPQGRTL 94 K LE +++ +++ F L Sbjct: 696 SGKFILLEKLLKHTVFEQGKKVLIFSGFTRTLDYCEDLLSLISNRGEKFRHLRLDGSSAR 755 Query: 95 DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I+ +N+ ++ + G G+NL ++F W+ + Sbjct: 756 ARRNLDIRLFNQEGSDYKVMLLSTRAGGLGINLTS-AQDVIFLDEDWNPQITL-----QA 809 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V +Y L Q T++E ++ R+R K + + +++ Sbjct: 810 EARAHRIGQTKPVTIYKLCTQGTVEEQMMGRIRKKLYLSAKITESMQ 856 >gi|145616124|ref|XP_361006.2| hypothetical protein MGG_03549 [Magnaporthe oryzae 70-15] gi|145009888|gb|EDJ94544.1| hypothetical protein MGG_03549 [Magnaporthe oryzae 70-15] Length = 819 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N E K W + + + Sbjct: 525 LKAIGILKKLCNHPDLLNLSDDLPGSEAHWPSDYVPKESRGRDREIKPWYSGKMQVLDRM 584 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I I++ ++ S L ++ + K + ++N+ + Sbjct: 585 LARIRADTNDKIVLISNYTSTLDLFERLCRNRGYGSLRLDGTMNVTKRQKLVDKFNDPEG 644 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 645 SEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 698 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 699 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 730 >gi|134077689|emb|CAK45729.1| unnamed protein product [Aspergillus niger] Length = 846 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 548 LKAIGLLKKLCNHPDLLNLSNDLPGCEYTFPEDYVPPEARGRDRDIKSWYSGKMMVLDRM 607 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K T+ K + ++N Sbjct: 608 LARIRQDTNDKIVLISNYTQTLDLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDG 667 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 668 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 721 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 722 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 753 >gi|50310725|ref|XP_455384.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644520|emb|CAG98092.1| KLLA0F06710p [Kluyveromyces lactis] Length = 1096 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 78/226 (34%), Gaps = 39/226 (17%) Query: 7 FQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYYD----------EE 45 Q++ Y + ++I+A N + ++ + N +D +E Sbjct: 381 MQKKWYKQILEKDIDAVNGSNGQKESKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDE 440 Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 K+ + K + +++ + L L+ + Sbjct: 441 HLVYNSAKLKVLDKLLKKFKEQGSRVLIFSQMSRVLDILEDYCYFREYEYCRIDGSTAHE 500 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I ++N + + G G+NL +I+V + W+ + + + Sbjct: 501 DRINAIDDYNAPDSKKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAM 554 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ + N+++E +L+R K + L++ + Sbjct: 555 DRAHRIGQKKQVRVFRFVTDNSVEEKILERATQKLKLDQLVIQQGR 600 >gi|292630953|sp|B4NXB8|RAD54_DROYA RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra Length = 784 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 71/224 (31%), Gaps = 42/224 (18%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------------- 52 R D + + + + ++ + E+ +E Sbjct: 434 VRRSLADCNEK--ASLTALADITTLKKICSHPDLIYEKITAREKGFENSQNVLPSNYNTK 491 Query: 53 ------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K L+ ++ +++ ++ L ++ + Sbjct: 492 DLNPELSGKFMLLDFMLAAIRADGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMS 551 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIG 152 + K + +N+ + +S G L G N L F W+ + Sbjct: 552 IKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DEQA 606 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ ++Y ++A +I+E +LQR K ++ +++ Sbjct: 607 MARVWRDGQKKPCYIYRMVASGSIEEKILQRQTHKKSLSSTIID 650 >gi|302500427|ref|XP_003012207.1| hypothetical protein ARB_01467 [Arthroderma benhamiae CBS 112371] gi|291175764|gb|EFE31567.1| hypothetical protein ARB_01467 [Arthroderma benhamiae CBS 112371] Length = 881 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 78/218 (35%), Gaps = 28/218 (12%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-------KHWKEVHDEKIKAL 59 R ++ + I + + ++ + N + + K+ L Sbjct: 584 MVRSNLSTIE-KEISSKKLQNPVMQARLVCNSPLNFYWPWGEDSGVDSTLITSSGKMLLL 642 Query: 60 EVIIEK--ANAAPIIVAYHFN------SDLARLQKAFPQGRTL------DKDPCTIQEWN 105 + ++ + I++ F D A +++ R D+ N Sbjct: 643 DRLVPCLISKGHKILIFSQFKGQLDILEDWATQLRSWNCCRIDGAIAQADRQEQINSFNN 702 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G G+NL + ++ F W+ ++ + R + G + V Sbjct: 703 DPDYRIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTKPV 756 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 VY L + TI++ +L+R +K ++ L++ K +++ Sbjct: 757 IVYRLATRGTIEQTLLERAGSKRRLEKLVIQKGKFKSL 794 >gi|294660619|ref|NP_853484.2| SNF2 family helicase [Mycoplasma gallisepticum str. R(low)] gi|284812282|gb|AAP57052.2| SNF2 family helicase [Mycoplasma gallisepticum str. R(low)] gi|284930981|gb|ADC30920.1| SNF2 family helicase [Mycoplasma gallisepticum str. R(high)] gi|284931739|gb|ADC31677.1| SNF2 family helicase [Mycoplasma gallisepticum str. F] Length = 1108 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 68/210 (32%), Gaps = 26/210 (12%) Query: 5 HKFQRELYCDLQGENIEAFNS----ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + + E+ +Q + A + Q+ + E + K A Sbjct: 890 QEVKEEILKIIQNKEQSRKGLGIMLAKLLNELRQICCSPKLLNPSF---EGENAKFVAAM 946 Query: 61 VIIEK--ANAAPIIVAYH-------FNSDLARLQKAFP----QGRTLDKDPCTIQEWNEG 107 II + ++ F +L + + + N Sbjct: 947 DIINNAIKSNKKTLLFSQYLGVISLFKKELEQRNIKYFILTGDTPKEVRLQYVNDFNNAK 1006 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + A + G GLNL G I++ + LWW+L R + G + + V Sbjct: 1007 EPAVFIASLKAGGVGLNLT-GAEIVIHYDLWWNLALQ-----NQATDRAHRIGQRNHLQV 1060 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y +IA +TI+E ++ K + L+ Sbjct: 1061 YRIIAADTIEERIVAIQERKKELAAKLIQE 1090 >gi|222629381|gb|EEE61513.1| hypothetical protein OsJ_15806 [Oryza sativa Japonica Group] Length = 934 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 64/165 (38%), Gaps = 19/165 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 + K +AL ++ + +++ + + L L+ G Sbjct: 705 TDEHVLGSAKCQALAELLPSLANDGHRVLIFSQWTTMLDILEWTLEVIGVTYRRLDGGTP 764 Query: 94 LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + +N + I + G GLNL G + ++ + ++ + ++R Sbjct: 765 VTERQTIVDTFNNDRSIFACLLSTRAGGQGLNL-IGADTVIIHDMDFNPQ-----MDRQA 818 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G ++ V +Y L+ + ++DE + + R K + +L + Sbjct: 819 EDRCHRIGQQKPVTIYRLVTKGSVDENIYEIARRKLVLDAAILQS 863 >gi|303318669|ref|XP_003069334.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240109020|gb|EER27189.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 869 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 74/214 (34%), Gaps = 26/214 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------HDEKIKA 58 + +R L + I + + ++ N + + K+ Sbjct: 573 EIERAKTMKLAKKEIASKKLQNPLMQARLACNSPHNFYWPWDEESDIDESLVTASGKMLL 632 Query: 59 LEVIIEK--ANAAPIIVAYHFN------SDLARLQKAFPQ----GRTLDKDPCTIQEWN- 105 L+ ++ + +++ F D A L+ + I +N Sbjct: 633 LDRLVPCLLSKGHKVLIFSQFKTQLDILQDWAYLRNWNCCRIDGAVSQADRQAQINAFNA 692 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G G+NL + ++ + W+ ++ + R + G + V Sbjct: 693 DPDYKIFLLSTRAGGLGINLTA-ADTVILYDSDWNPQQ-----DLQAQDRAHRIGQTKPV 746 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L + T+++ +L+R +K ++ L++ K Sbjct: 747 IVYRLATRGTVEQTLLERADSKRRLEKLVIQKGK 780 >gi|62948072|gb|AAH94345.1| Btaf1 protein [Mus musculus] Length = 990 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 670 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 729 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 730 QHPEFKSTTEKLTVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSSTESGTESVVAQHRIL 789 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 790 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 849 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 850 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 903 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 904 KIMGLQKFKMNIANTVIS 921 >gi|296231077|ref|XP_002807783.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9-like [Callithrix jacchus] Length = 2896 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1108 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1167 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1341 >gi|302922109|ref|XP_003053398.1| hypothetical protein NECHADRAFT_65429 [Nectria haematococca mpVI 77-13-4] gi|256734339|gb|EEU47685.1| hypothetical protein NECHADRAFT_65429 [Nectria haematococca mpVI 77-13-4] Length = 1013 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 71/172 (41%), Gaps = 19/172 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQ 90 + E+ K+K L +I++ N ++V F+ + + Sbjct: 823 FDVPEETEMDSGKVKKLLELIQQYQENGDRVLVFSKFSRVIELLQEVLSLKGIQHRILMG 882 Query: 91 GRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + I E+N+ +IP+ + G G+NL N ++ F + ++ + Sbjct: 883 NTNVSERQTLIDEFNDDPEIPVFLLTTGAGGTGINLTA-ANKVIIFDQSDNPQD-----D 936 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G KR V + LIA +TI+EL+ + + K + + + A++ E Sbjct: 937 IQAENRAHRLGQKRDVEIIRLIASHTIEELIYKACQKKIELANKVTGAVEDE 988 >gi|170584903|ref|XP_001897230.1| Type III restriction enzyme, res subunit family protein [Brugia malayi] gi|158595354|gb|EDP33914.1| Type III restriction enzyme, res subunit family protein [Brugia malayi] Length = 1595 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 77/222 (34%), Gaps = 31/222 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y +L + N ++ + N + +E Sbjct: 669 QYYKWILTKNYKELSKGVKGSINGFVNLVMELKKCCNHSSLVRSYDQAEEGADARLQQLL 728 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 K+ L+ ++ + +++ L +Q+ R + Sbjct: 729 KSSGKLILLDKLLCRLQETGHRVLIFSQMVMMLDIMQEYLQLRRFPSQRLDGSMRSDLRK 788 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N P + G G+NL + ++ F W+ + + ++R Sbjct: 789 AALDHFNAPNSPDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAMSRA 842 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + +++E +++R + K + L++ + Sbjct: 843 HRIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLIIQRM 884 >gi|311271626|ref|XP_001925252.2| PREDICTED: TATA-binding protein-associated factor 172 [Sus scrofa] Length = 1877 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1557 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 1616 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1617 QHPEFKSTTEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESIVAQHRIL 1676 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1677 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 1736 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1737 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1790 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1791 KIMGLQKFKMNIANTVIS 1808 >gi|297687009|ref|XP_002821019.1| PREDICTED: TATA-binding protein-associated factor 172-like [Pongo abelii] Length = 1849 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 75/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1529 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 1588 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 H + H K+ AL+ ++ I+ Sbjct: 1589 HHPEFKTTAEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRIL 1648 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1649 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 1708 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1709 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1762 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1763 KIMGLQKFKMNIANTVIS 1780 >gi|198458681|ref|XP_002138575.1| GA24314 [Drosophila pseudoobscura pseudoobscura] gi|198136427|gb|EDY69133.1| GA24314 [Drosophila pseudoobscura pseudoobscura] Length = 3240 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 71/186 (38%), Gaps = 11/186 (5%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 DL I A + + +Q G + + + K+ V+I + Sbjct: 1671 LDLLHPIISAMTTQFPDPRLIQYDCGKLQTLDR----LLRQLKVDGHRVLIFTQMTKMLD 1726 Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 V F + + +++ ++ +N + +I S G G+NL G + Sbjct: 1727 VLEAFLNHHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADT 1785 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ ++ R + G R V +Y L+++ TI+ +L++ K + Sbjct: 1786 VIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTIEVNILKKANQKRMLS 1840 Query: 192 DLLLNA 197 D+ + Sbjct: 1841 DMAIEG 1846 >gi|163644482|gb|AAC17559.2| Temporarily assigned gene name protein 192 [Caenorhabditis elegans] Length = 2963 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 72/242 (29%), Gaps = 45/242 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 K Y + L A + + ++ + N + + Sbjct: 1445 KFYRAILERNFSHLCKGT-SAPSLMNVMMELRKCCNHPFLINGAEEAIMNDFRLAHPDWD 1503 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K+ +E ++ K + +++ L L++ + Sbjct: 1504 EETLAHKALIQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERI 1563 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ F W+ + Sbjct: 1564 DGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN--- 1619 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKETI 203 + R + G K+ V VY LI NT + + + K + +L ALK E Sbjct: 1620 --DLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEGT 1677 Query: 204 HV 205 + Sbjct: 1678 AL 1679 >gi|216548186|ref|NP_003570.2| DNA repair and recombination protein RAD54-like [Homo sapiens] gi|216548193|ref|NP_001136020.1| DNA repair and recombination protein RAD54-like [Homo sapiens] gi|51316508|sp|Q92698|RAD54_HUMAN RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=RAD54 homolog; Short=hHR54; Short=hRAD54 gi|47777671|gb|AAT38113.1| RAD54-like (S. cerevisiae) [Homo sapiens] gi|56204069|emb|CAI22117.1| RAD54-like (S. cerevisiae) [Homo sapiens] gi|111307699|gb|AAI21061.1| RAD54-like (S. cerevisiae) [Homo sapiens] gi|111309424|gb|AAI21060.1| RAD54-like (S. cerevisiae) [Homo sapiens] gi|119627335|gb|EAX06930.1| RAD54-like (S. cerevisiae), isoform CRA_b [Homo sapiens] Length = 747 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 83/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L + + +S T +L N ++ +E Sbjct: 422 ELYKRFLRQAKPAEELLEGKMSVSSLSSITS-LKKLCNHPALIYDKCVEEEDGFVGALDL 480 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 481 FPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY 540 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 541 VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 599 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 600 -----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 648 >gi|291404474|ref|XP_002718566.1| PREDICTED: helicase, lymphoid-specific [Oryctolagus cuniculus] Length = 837 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 63/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 563 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELQKRGHKVLLFSQ 622 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + + +N + + + + G G+NL Sbjct: 623 MTRMLDILMDYCHLRNFNFSRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINL 682 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 683 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 736 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 737 AKRKLEKLIIH 747 >gi|221106529|ref|XP_002167321.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 352 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 66/166 (39%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPC 99 K+ L+ ++ K +++ + L++ + Sbjct: 40 DSGKLLVLDKLLTRLKKEDHRVLIYSQMTKMIDILEEFMKFRKHSYMRLDGSSKISDRRD 99 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ I + G G+NL + ++F+ W+ +++ + R + Sbjct: 100 MVSDFQSRDIFAFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHRL 153 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETI 203 G + V VY L+ + T++E +L R R KS IQ+++++ KE + Sbjct: 154 GQTKQVTVYRLVTKGTVEEKILNRAREKSEIQNIVISGGQFNKEVL 199 >gi|242012609|ref|XP_002427022.1| predicted protein [Pediculus humanus corporis] gi|212511267|gb|EEB14284.1| predicted protein [Pediculus humanus corporis] Length = 1570 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 61/152 (40%), Gaps = 17/152 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLF 113 K +++ + L++ + ++ + I + Sbjct: 1150 KEGGHRVLIYSQMTRMIDLLEEYMWHRKHTYMRLDGSSKISERRDMVADFQSRADIFVFL 1209 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++F+ W+ +++ + R + G + V VY LI + Sbjct: 1210 LSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHRLGQTKQVTVYRLICK 1263 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 TI+E +LQR R KS IQ ++++ + H+ Sbjct: 1264 GTIEERILQRAREKSEIQRMVISGGNFKPDHL 1295 >gi|193203140|ref|NP_491426.2| Temporarily Assigned Gene name family member (tag-192) [Caenorhabditis elegans] Length = 2967 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 72/242 (29%), Gaps = 45/242 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 K Y + L A + + ++ + N + + Sbjct: 1449 KFYRAILERNFSHLCKGT-SAPSLMNVMMELRKCCNHPFLINGAEEAIMNDFRLAHPDWD 1507 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K+ +E ++ K + +++ L L++ + Sbjct: 1508 EETLAHKALIQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERI 1567 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ F W+ + Sbjct: 1568 DGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN--- 1623 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKETI 203 + R + G K+ V VY LI NT + + + K + +L ALK E Sbjct: 1624 --DLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEGT 1681 Query: 204 HV 205 + Sbjct: 1682 AL 1683 >gi|158258659|dbj|BAF85300.1| unnamed protein product [Homo sapiens] Length = 747 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 83/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L + + +S T +L N ++ +E Sbjct: 422 ELYKRFLRQAKPAEELLEGKMSVSSLSSITS-LKKLCNHPALIYDKCVEEEDGFVGALDL 480 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 481 FPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY 540 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 541 VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 599 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 600 -----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 648 >gi|320034447|gb|EFW16391.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Coccidioides posadasii str. Silveira] Length = 869 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 74/214 (34%), Gaps = 26/214 (12%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------HDEKIKA 58 + +R L + I + + ++ N + + K+ Sbjct: 573 EIERAKTMKLAKKEIASKKLQNPLMQARLACNSPHNFYWPWDEESDIDESLVTASGKMLL 632 Query: 59 LEVIIEK--ANAAPIIVAYHFN------SDLARLQKAFPQ----GRTLDKDPCTIQEWN- 105 L+ ++ + +++ F D A L+ + I +N Sbjct: 633 LDRLVPCLLSKGHKVLIFSQFKTQLDILQDWAYLRNWNCCRIDGAVSQADRQAQINAFNA 692 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G G+NL + ++ + W+ ++ + R + G + V Sbjct: 693 DPDYKIFLLSTRAGGLGINLTA-ADTVILYDSDWNPQQ-----DLQAQDRAHRIGQTKPV 746 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L + T+++ +L+R +K ++ L++ K Sbjct: 747 IVYRLATRGTVEQTLLERADSKRRLEKLVIQKGK 780 >gi|195161916|ref|XP_002021802.1| GL26701 [Drosophila persimilis] gi|292630865|sp|B4GS98|RAD54_DROPE RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|194103602|gb|EDW25645.1| GL26701 [Drosophila persimilis] Length = 782 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 76/238 (31%), Gaps = 50/238 (21%) Query: 1 MKQY------HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--------------- 39 ++ Y + +R L + + + + +L + Sbjct: 419 LQLYTNFLKSDQVRRSLA---DCKEKASLTALADITTLKKLCSHPNLICEKIAAGEKGFE 475 Query: 40 -------VYYDEEKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQ---- 85 + Y+ + K K L+ ++ +++ ++ L + Sbjct: 476 NSQNILPINYNPKGEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFELLAR 535 Query: 86 ------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLW 138 ++ K + +N+ + +S G L G N L F Sbjct: 536 KRKYGFVRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNLIGANRLFMFDPD 595 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 596 WNPAN-----DEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 648 >gi|190407604|gb|EDV10871.1| ATPase component of a two subunit chromatin remodeling complex [Saccharomyces cerevisiae RM11-1a] Length = 1121 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 80/224 (35%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEK 46 Q + Y L ++I+A N A ++ + N + Sbjct: 423 DMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ +++ K + +++ + L L+ + Sbjct: 483 EHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSH 542 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I E+N+ + + G G+NL + ++ F W+ + + Sbjct: 543 EERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVT-ADTVILFDSDWNPQA-----DLQA 596 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V VY + +N I+E V++R K + L++ Sbjct: 597 MDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640 >gi|6324879|ref|NP_014948.1| Isw2p [Saccharomyces cerevisiae S288c] gi|74676479|sp|Q08773|ISW2_YEAST RecName: Full=ISWI chromatin-remodeling complex ATPase ISW2; AltName: Full=Imitation switch protein 2 gi|1420671|emb|CAA99622.1| unnamed protein product [Saccharomyces cerevisiae] gi|285815176|tpg|DAA11069.1| TPA: Isw2p [Saccharomyces cerevisiae S288c] Length = 1120 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 80/224 (35%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEK 46 Q + Y L ++I+A N A ++ + N + Sbjct: 423 DMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ +++ K + +++ + L L+ + Sbjct: 483 EHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSH 542 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I E+N+ + + G G+NL + ++ F W+ + + Sbjct: 543 EERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVT-ADTVILFDSDWNPQA-----DLQA 596 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V VY + +N I+E V++R K + L++ Sbjct: 597 MDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640 >gi|307180140|gb|EFN68184.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein [Camponotus floridanus] Length = 1960 Score = 96.0 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 66/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + + N + E Sbjct: 974 KYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTGPNGSYETS 1033 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLD 95 K+ L +++K + +++ L + T Sbjct: 1034 ALIKAAGKLVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGNITGS 1093 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I +N + + G G+NL + ++ + W+ + Sbjct: 1094 QRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1147 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1148 SRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1189 >gi|297490772|ref|XP_002698437.1| PREDICTED: helicase, lymphoid specific-like [Bos taurus] gi|296472735|gb|DAA14850.1| helicase, lymphoid specific-like [Bos taurus] Length = 784 Score = 96.0 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 63/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 510 MMLLRKCCNHPYLIEYPIDPVTQEFKVDEELVTNSGKFLILDRMLPELKTRGHKVLLFSQ 569 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + I +N + + + + G G+NL Sbjct: 570 MTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNIHSFNTDPDVFIFLVSTRAGGLGINL 629 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G R V VY L+ NTID+ +++R Sbjct: 630 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTRPVVVYRLVTANTIDQKIVERAA 683 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 684 AKRKLEKLIIH 694 >gi|207340908|gb|EDZ69113.1| YOR304Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1121 Score = 96.0 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 80/224 (35%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEK 46 Q + Y L ++I+A N A ++ + N + Sbjct: 423 DMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ +++ K + +++ + L L+ + Sbjct: 483 EHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSH 542 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I E+N+ + + G G+NL + ++ F W+ + + Sbjct: 543 EERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVT-ADTVILFDSDWNPQA-----DLQA 596 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V VY + +N I+E V++R K + L++ Sbjct: 597 MDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640 >gi|190347724|gb|EDK40055.2| hypothetical protein PGUG_04153 [Meyerozyma guilliermondii ATCC 6260] Length = 990 Score = 96.0 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 38/226 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK----------TVKCLQLANGAVYYDEEK--------H 47 QR Y + ++I+A N A+K ++ + N ++ + Sbjct: 373 DMQRSWYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPFTTDE 432 Query: 48 WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLD 95 + EK+K L+ ++ ++ + +++ + L Sbjct: 433 HLVYNAEKMKILDQLLKKFQSEGSRVLIFSQMSRMLDILEDYCAFREFQYCRIDGQTDHA 492 Query: 96 KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I E+N+ + + G G+NL +I++ F W+ + + + Sbjct: 493 DRVNAIDEYNKPGSEKFVFLLTTRAGGLGINLTS-ADIVILFDSDWNPQA-----DLQAM 546 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V V+ I +N I+E VL+R K + L++ + Sbjct: 547 DRAHRIGQTKQVKVFRFITENAIEEKVLERAAQKLRLDQLVIQQGR 592 >gi|987661|dbj|BAA05142.1| transcriptional activator hSNF2a [Homo sapiens] Length = 1572 Score = 96.0 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 977 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1036 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1037 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1096 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1097 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-AHTVVIFDSDWNPHQ--- 1152 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1153 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1201 >gi|1495483|emb|CAA66379.1| RAD54 [Homo sapiens] Length = 747 Score = 96.0 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 83/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L + + +S T +L N ++ +E Sbjct: 422 ELYKRFLRQAKPAEELLEGKMSVSSLSSITS-LKKLCNHPALIYDKCVEEEDGFVGALDL 480 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 481 FPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY 540 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 541 VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 599 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 600 -----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 648 >gi|195470937|ref|XP_002087763.1| GE14966 [Drosophila yakuba] gi|194173864|gb|EDW87475.1| GE14966 [Drosophila yakuba] Length = 772 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 71/224 (31%), Gaps = 42/224 (18%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------------- 52 R D + + + + ++ + E+ +E Sbjct: 422 VRRSLADCNEK--ASLTALADITTLKKICSHPDLIYEKITAREKGFENSQNVLPSNYNTK 479 Query: 53 ------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K L+ ++ +++ ++ L ++ + Sbjct: 480 DLNPELSGKFMLLDFMLAAIRADGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMS 539 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIG 152 + K + +N+ + +S G L G N L F W+ + Sbjct: 540 IKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DEQA 594 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ ++Y ++A +I+E +LQR K ++ +++ Sbjct: 595 MARVWRDGQKKPCYIYRMVASGSIEEKILQRQTHKKSLSSTIID 638 >gi|308806421|ref|XP_003080522.1| chromatin-remodelling complex ATPase ISWI2 (ISS) [Ostreococcus tauri] gi|116058982|emb|CAL54689.1| chromatin-remodelling complex ATPase ISWI2 (ISS) [Ostreococcus tauri] Length = 1036 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 74/223 (33%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q+ Y + ++I+ NS + ++ + N + Sbjct: 414 EMQKTFYKRILQKDIDIVNSGADRSRLLNIVMQLRKCCNHPYLFQGAEPGPPYITGDHLI 473 Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDK-DP 98 K+ L+ ++ + +++ R Q G T + Sbjct: 474 ESSGKLALLDKLLPRLMERGSRVLIFSQMTRLLDILEDYMMYRRYQYCRIDGSTDGETRE 533 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ + G G+NL + ++ + W+ + ++ + R Sbjct: 534 NHIDAFNKEGSEKFAFLLSTRAGGLGINL-ATADTVIIYDSDWNPQ-----MDLQAMDRA 587 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ +++E V+++ K + L++ + Sbjct: 588 HRIGQKKEVQVFRFCTDGSVEEKVIEKAYKKLALDALVIQQGR 630 >gi|42407261|dbj|BAD10847.1| lymphoid specific helicase variant4 [Homo sapiens] gi|119570421|gb|EAW50036.1| helicase, lymphoid-specific, isoform CRA_k [Homo sapiens] Length = 708 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 434 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 493 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 494 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 553 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 554 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 607 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 608 AKRKLEKLIIH 618 >gi|256272525|gb|EEU07504.1| Isw2p [Saccharomyces cerevisiae JAY291] Length = 1121 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 80/224 (35%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEK 46 Q + Y L ++I+A N A ++ + N + Sbjct: 423 DMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 482 Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ +++ K + +++ + L L+ + Sbjct: 483 EHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSH 542 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I E+N+ + + G G+NL + ++ F W+ + + Sbjct: 543 EERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVT-ADTVILFDSDWNPQA-----DLQA 596 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V VY + +N I+E V++R K + L++ Sbjct: 597 MDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 640 >gi|226531237|ref|NP_001141865.1| chromatin complex subunit A [Zea mays] gi|194706224|gb|ACF87196.1| unknown [Zea mays] Length = 444 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 76/214 (35%), Gaps = 28/214 (13%) Query: 4 YHKF-QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIK 57 Y + RE G +A + S ++ + N + E + + K + Sbjct: 9 YEQVTSREKVALGFGLRSKALQNLS--MQLRKCCNHPYLFVEHYNMYQREEIVRASGKFE 66 Query: 58 ALEVIIEKAN--AAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWN 105 L+ ++ K +++ ++ + ++N Sbjct: 67 LLDRLLPKLQRAGHRVLLFSQMTKLLDVLEIYLQMYNFKYMRLDGSTKTEERGRLLADFN 126 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + + G GLNLQ + ++ F W+ + +++ R + G K Sbjct: 127 KKDSEYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQKN 180 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +I+E +L R + K I ++ A Sbjct: 181 EVRVFVLVSVGSIEEEILDRAKQKMGIDAKVIQA 214 >gi|67609493|ref|XP_667013.1| hypothetical protein [Cryptosporidium hominis TU502] gi|54658094|gb|EAL36778.1| hypothetical protein Chro.60441 [Cryptosporidium hominis] Length = 1102 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 77/221 (34%), Gaps = 29/221 (13%) Query: 2 KQYHKFQRELYCDLQGENIE-AFNSASKTVKCLQLANGAVYYD--------EEKHWKEVH 52 + Y + LQ + + ++ + N +D + Sbjct: 435 RLYKDLLSKNVDALQEKEGGGKLRLINLAMQLRKACNHPYLFDGYEDKSVDPFGEHVVEN 494 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDPCT 100 K+ ++ +I+K + + I++ + + D Sbjct: 495 SGKMVLMDRLIKKLVSGGSRILIFSQMARVLDILEDYCHMRGFPYCRIDGNTSGDDRDRQ 554 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N+ + + G G+NL +I++ + W+ + + + R + Sbjct: 555 ISEFNKPNSEKLVFLLSTRAGGLGINL-ATADIVILYDSDWNPQA-----DLQAMDRAHR 608 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ VFV+ L ++TI+E +++R K + ++ + Sbjct: 609 IGQKKPVFVFRLCHEHTIEEKIIERANLKLQLDFAIIQQGR 649 >gi|325181909|emb|CCA16363.1| ChromodomainhelicaseDNAbinding protein 8 putative [Albugo laibachii Nc14] Length = 2334 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 63/223 (28%), Gaps = 34/223 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-----EEKHWKEVHDEK 55 K Y L G N + ++ + N E E+ K Sbjct: 1470 KYYRAIFERNRAFLNQGAAGSVANLVNVEMELRKCCNHPFLIRGVEEKECSRLNEIQRSK 1529 Query: 56 ----------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + + +A I++ F L ++ + Sbjct: 1530 ILVQASGKTVLLDKMLAKFRAEEKKILIFSQFKMMLDVIEDLCHLRGYQIERMDGSVRGN 1589 Query: 98 --PCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N K + G G+NL ++++ + W+ + + V Sbjct: 1590 LRQAAIDRFNNPKSDTFAFLLSTRAGGVGINL-IAASVVILYDSDWNPQN-----DLQAV 1643 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G ++V +Y L+ + T + + K + + Sbjct: 1644 ARCHRIGQTKSVNIYRLVTKKTYEAQMFDIASKKLGMHHAVFE 1686 >gi|145339485|ref|NP_190996.2| RGD3 (ROOT GROWTH DEFECTIVE 3); ATP binding / DNA binding / binding / helicase/ nucleic acid binding [Arabidopsis thaliana] Length = 2038 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 83/270 (30%), Gaps = 74/270 (27%) Query: 1 MKQYHKFQ----RELYCDLQGENIEA-------------FNSASKTVKCLQLANGAVYYD 43 +K Y +F ++ + + A + L+L + + Sbjct: 1702 LKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVL 1761 Query: 44 EEKHWKEV----------------------HDEKIKALEVIIEKAN-------------- 67 +K + V H K+ AL+ I+E+ Sbjct: 1762 GDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVALQEILEECGIGSDASSSDGTLSV 1821 Query: 68 -AAPIIVAYHFN-------------SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 +++ + +K ++ +N + I +L Sbjct: 1822 GQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVL 1881 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G GLNL + LVF W+ + + R + G KR V V+ LI Sbjct: 1882 LLTTHVGGLGLNLTS-ADTLVFMEHDWNPMR-----DHQAMDRAHRLGQKRVVNVHRLIM 1935 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + T++E V+ + K ++ + ++NA Sbjct: 1936 RGTLEEKVMSLQKFKVSVANTVINAENASM 1965 >gi|311245835|ref|XP_001925950.2| PREDICTED: probable global transcription activator SNF2L2 [Sus scrofa] Length = 1515 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 902 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 961 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 962 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1021 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1022 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1077 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1078 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1126 >gi|73998076|ref|XP_859353.1| PREDICTED: similar to helicase, lymphoid-specific isoform 6 [Canis familiaris] Length = 835 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 63/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 561 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKARGHKVLLFSQ 620 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + + +N + + + + G G+NL Sbjct: 621 MTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINL 680 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 681 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 734 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 735 AKRKLEKLIIH 745 >gi|313228968|emb|CBY18120.1| unnamed protein product [Oikopleura dioica] Length = 996 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 80/227 (35%), Gaps = 39/227 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 + Q+ Y + ++I+ N+ + + + N + Sbjct: 360 EMQKNWYKKILLKDIDILNTGGDKGGGKMRLMNILMHLRKCTNHPYLFDGAEPGPPYTTD 419 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ ++ KAN +++ F S L + G Sbjct: 420 QHIVDNCGKMVILDKLLKKCKANGDRVLLFTQFTSMLDIFEDYCLWRDYKYCRLDGGTDH 479 Query: 95 DKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +I +N + G G+NL N+++ + W+ + + Sbjct: 480 ADRTESIDAYNAPNSEKFLFMLSTKAGGLGINLMT-ANVVIIYDSDWNPQN-----DLQA 533 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G K+ V+VY +I ++DE +++R K + +++ + + Sbjct: 534 MDRAHRIGQKKQVYVYRMITDESVDERIIERSELKMRLDSVVIQSGR 580 >gi|115644354|ref|XP_001201170.1| PREDICTED: similar to E1a binding protein P400 [Strongylocentrotus purpuratus] gi|115956564|ref|XP_001178919.1| PREDICTED: similar to E1a binding protein P400 [Strongylocentrotus purpuratus] Length = 3330 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 74/201 (36%), Gaps = 24/201 (11%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----HDEKIKALEVIIEK--AN 67 + N+ S +K + E+ K++ ++ ++ K Sbjct: 1951 VLNSERTLMNTLSSELKPKSWCLHPIENLMRLDMPELRLIQYDCGKLQTMDGLLRKLKTE 2010 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHP 116 + +++ L L++ + + ++ +N + +I Sbjct: 2011 GSRVLIFTQMTKMLDILERFLNFHGHIYLRLDGTTKVEQRQIMMERFNKDPRIFCFILST 2070 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 S G G+NL G N ++F+ W+ ++ R + G R V +Y LI++ +I Sbjct: 2071 RSGGMGVNLT-GANAVIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLISEMSI 2124 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +L++ K + D+ + Sbjct: 2125 EENILKKSNQKRLLIDVSIEG 2145 >gi|52138743|ref|NP_001004446.1| probable global transcription activator SNF2L2 [Rattus norvegicus] gi|49616741|gb|AAT67217.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 [Rattus norvegicus] Length = 1597 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 984 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1043 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1044 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1103 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1104 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1159 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1160 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1208 >gi|321263641|ref|XP_003196538.1| helicase [Cryptococcus gattii WM276] gi|317463015|gb|ADV24751.1| Helicase, putative [Cryptococcus gattii WM276] Length = 926 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 76/219 (34%), Gaps = 34/219 (15%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKA 58 RE +++ + ++ ++++ +D K+ Sbjct: 592 REWALKQATKHVNNMRLQNLVMQLRKISSHPYLFDWPSDPVTGELVVDDNLVNASGKMLL 651 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWN 105 L +++ +++ F + L + + + E+N Sbjct: 652 LNRLLDALFRKGHRVLLFSQFTTMLDVIEDWATVYKGWKVCRIDGSTSQESRREQMDEFN 711 Query: 106 EGK-----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 GK L + G G+NL + ++FF W+ + ++ R + G Sbjct: 712 GGKDDPDACKLFLLSTRAGGLGINLVS-ADTVIFFDQDWNPQ-----MDLQAQDRAHRIG 765 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V V+ L++ +TI+ +L + K ++ L+++ K Sbjct: 766 QTKPVLVFRLVSAHTIESKILAKAGNKRKLEALVISQGK 804 >gi|114631891|ref|XP_001150939.1| PREDICTED: helicase, lymphoid-specific isoform 5 [Pan troglodytes] Length = 708 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 434 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 493 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 494 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 553 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 554 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 607 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 608 AKRKLEKLIIH 618 >gi|312221998|emb|CBY01938.1| hypothetical protein [Leptosphaeria maculans] Length = 1469 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 64/212 (30%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N E K W + + Sbjct: 511 LKVIGMLKKLCNHPDLLNLPEDLPGCEDVLPDDFVQKDARGRDREVKVWYSGKMAVLDRM 570 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I I++ ++ L + K + ++N+ + Sbjct: 571 LARIRAETNDKIVLISNYTQTLDLFAALCRSRGYGALRLDGTMNVSKRQKLVDKFNDPEG 630 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 631 PEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 684 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y I TI+E V QR K ++ ++++ + Sbjct: 685 YRFITTGTIEEKVFQRQSHKQSLSSCVVDSAE 716 >gi|297279826|ref|XP_001093777.2| PREDICTED: chromodomain helicase DNA binding protein 1-like [Macaca mulatta] Length = 617 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 73/215 (33%), Gaps = 25/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 7 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASG 66 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ + +++ L LQ ++ I+ Sbjct: 67 KLYLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIK 126 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I + + G G+NL + ++F ++ + + R + G Sbjct: 127 NFGQQPIFVFLLSTRAGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQN 180 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 181 KSVKVIRLIGRDTVEEIVSRKAASKLQLTNMIIEG 215 >gi|197691963|dbj|BAG70033.1| homolog of human BTAF1 [Arabidopsis thaliana] Length = 2045 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 83/270 (30%), Gaps = 74/270 (27%) Query: 1 MKQYHKFQ----RELYCDLQGENIEA-------------FNSASKTVKCLQLANGAVYYD 43 +K Y +F ++ + + A + L+L + + Sbjct: 1709 LKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVL 1768 Query: 44 EEKHWKEV----------------------HDEKIKALEVIIEKAN-------------- 67 +K + V H K+ AL+ I+E+ Sbjct: 1769 GDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVALQEILEECGIGSDASSSDGTLSV 1828 Query: 68 -AAPIIVAYHFN-------------SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 +++ + +K ++ +N + I +L Sbjct: 1829 GQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVL 1888 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G GLNL + LVF W+ + + R + G KR V V+ LI Sbjct: 1889 LLTTHVGGLGLNLTS-ADTLVFMEHDWNPMR-----DHQAMDRAHRLGQKRVVNVHRLIM 1942 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + T++E V+ + K ++ + ++NA Sbjct: 1943 RGTLEEKVMSLQKFKVSVANTVINAENASM 1972 >gi|66358754|ref|XP_626555.1| SWI/SNF related transcriptional regulator ATpase [Cryptosporidium parvum Iowa II] gi|46227736|gb|EAK88656.1| SWI/SNF related putative transcriptional regulator ATpase [Cryptosporidium parvum Iowa II] Length = 1552 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 79/215 (36%), Gaps = 26/215 (12%) Query: 3 QYHKFQRELY--CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + +++ DL I+ + ++ ++ ++ N + EE ++ ++ Sbjct: 833 VYDQIKQKAVHSMDLSSGKIQYRSVSNTIMQLRKIVNHPYLFVEEYLIEDDDIFRVSCKF 892 Query: 61 VIIEKA------NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW 104 ++++ +++ + T+ + + E+ Sbjct: 893 EVLDRMLPKLIRFRHKVLIFCQMTQLMDILGDFLDYRGIEHHRLDGTMTIQERKEKMDEF 952 Query: 105 NEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N + + G GLNLQ + ++ F W+ + + +R + G K Sbjct: 953 NSPDSEKFVFVLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ-----DLQAQSRAHRMGQK 1006 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V ++ + ++ELVL+R + K I ++ A Sbjct: 1007 NEVRVLRFVSISGVEELVLKRAQKKLEIDHKIIQA 1041 >gi|332022432|gb|EGI62740.1| Chromodomain-helicase-DNA-binding protein 7 [Acromyrmex echinatior] Length = 4236 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 26/214 (12%), Positives = 69/214 (32%), Gaps = 30/214 (14%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + L A N + ++ + + K+ + Sbjct: 1996 KYYRGILERNFSFLAKGTTSANIPNLMNTMMELRKCCIHLFLVN--------SSGKMVLI 2047 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEG 107 + ++ K A+ +++ L L+ + + I +++ Sbjct: 2048 DKLLPKLKASGHRVLIFSQMVKCLDLLEDYLLYKKYPYERIDGRIRGNLRQAAIDRYSKP 2107 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G G+NL + ++ + W+ + + R + G ++ V Sbjct: 2108 DSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN-----DLQAQARCHRIGQQKMV 2161 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY L+ +NT + + + K + +L ++ Sbjct: 2162 KVYRLLCRNTYEREMFDKASLKLGLDKAILQSMN 2195 >gi|3329473|gb|AAC26857.1| RAD54 DNA repair protein [Drosophila melanogaster] Length = 628 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 42/224 (18%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------------- 52 R D + + + + ++ + E+ +E Sbjct: 278 VRRSLADCNEK--ASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPK 335 Query: 53 ------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K L+ ++ +++ ++ L ++ + Sbjct: 336 DLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMS 395 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIG 152 + K + +N+ + +S G L G N L F W+ + Sbjct: 396 IKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DEQA 450 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 451 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 494 >gi|296220834|ref|XP_002756505.1| PREDICTED: lymphoid-specific helicase isoform 7 [Callithrix jacchus] Length = 707 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 66/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + ++ K L+ ++ + +++ Sbjct: 433 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVINSGKFLILDRMLPELKKRGHKVLLFSQ 492 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 493 MTSMLDILMDYCHLRNFNFSRLDGSMSYSERERNMHSFNTDPEVFIFLVSTRAGGLGINL 552 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 553 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 606 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 607 AKRKLEKLIIH 617 >gi|317031306|ref|XP_001393160.2| DNA repair protein rhp54 [Aspergillus niger CBS 513.88] Length = 813 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 515 LKAIGLLKKLCNHPDLLNLSNDLPGCEYTFPEDYVPPEARGRDRDIKSWYSGKMMVLDRM 574 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K T+ K + ++N Sbjct: 575 LARIRQDTNDKIVLISNYTQTLDLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDG 634 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 635 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 688 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 689 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 720 >gi|115921268|ref|XP_787494.2| PREDICTED: similar to MGC81308 protein, partial [Strongylocentrotus purpuratus] gi|115974812|ref|XP_001181201.1| PREDICTED: similar to MGC81308 protein, partial [Strongylocentrotus purpuratus] Length = 629 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 25/178 (14%) Query: 39 AVYYDEEKHWKEV--HDEKIKALEVIIEKAN-----AAPIIVAYHFNSDLAR-------- 83 +Y E + + H K+ L ++ + +++ ++ L Sbjct: 395 PIYPPEYTEGRPLLAHCGKLCVLSEMLRAMHADPTRRERLVLVSNYTQTLDILQALCSIE 454 Query: 84 --LQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 K ++ +N + + G GLNL G + L+ + + W Sbjct: 455 GYQFCRLDGSTPTAKRQSIVEHFNSSYAKETIFLLSSKAGGVGLNL-IGASRLLLYDIDW 513 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G K+ V++Y LI TI+E + QR +K ++ +++A Sbjct: 514 NPAN-----DLQAMARVWRDGQKKTVYIYRLITAGTIEEKIYQRQISKQSLSGAVVDA 566 >gi|321476094|gb|EFX87055.1| RAD54B meiotic recombination protein [Daphnia pulex] Length = 1001 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 70/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 Y + + S + +L N + + E Sbjct: 693 LYRNVLDSSAVRSILSSTQTGNDQLSFILALRKLCNHPTLFAATRKHAECSELWQENYKE 752 Query: 53 ----------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 K I+ K II+ + L ++ + Sbjct: 753 DSSQIQSRDASGKFVVTFAILDSLMKNTKEKIILVSYSTKMLDLFGESCTERKYSFVRLD 812 Query: 91 -GRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + + +N+ + + + G GLNL G + L+ + + W+ Q Sbjct: 813 GSTPTNTRMGIVDRFNDPQGADRVFLLSSKAGGVGLNL-IGASRLILYDIDWNPANDMQA 871 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + RI + G KR V +Y L+ TI+E + QR K + +++A Sbjct: 872 MARIW-----REGQKRTVQIYRLLTTGTIEEKIFQRQILKQGLSGAIVDA 916 >gi|198455503|ref|XP_001360023.2| GA16098 [Drosophila pseudoobscura pseudoobscura] gi|198133273|gb|EAL29175.2| GA16098 [Drosophila pseudoobscura pseudoobscura] Length = 1662 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 +K K+ L+ ++ KA +++ + L++ + Sbjct: 1151 AIVVPDKETLITDAGKLFVLDTLLTRLKAEGHRVLIYSQMTKMIDLLEEYMWHRKHRYMR 1210 Query: 96 ---------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I + + G G+NL + ++F+ W+ Sbjct: 1211 LDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT---- 1265 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1266 -VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 1315 >gi|49476336|gb|AAT66509.1| KISH2 [Homo sapiens] Length = 2881 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 1108 KYYRAILEKNFSFLFKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 1167 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 1168 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 1227 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1228 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1284 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 1285 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 1341 >gi|328863054|gb|EGG12154.1| hypothetical protein MELLADRAFT_76598 [Melampsora larici-populina 98AG31] Length = 823 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 66/208 (31%), Gaps = 39/208 (18%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH--------------------DEKIKALEVIIEK 65 +L N D + K+ LE I + Sbjct: 537 LKMLGILRKLCNHPDLLDLHQDIPGSEKCFPEGYTSKDSRAPARPELSGKMVVLERIRTQ 596 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLF 113 I++ +F L ++K + + K + +N + + Sbjct: 597 TTD-KIVLISNFTQTLDVMEKMCRERRWGCLRLDGTMQITKRQKLVDRFNNPEGKEFIFL 655 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL G N L+ F W+ Q + R + G K+ FVY I Sbjct: 656 LSSKAGGCGINL-IGANRLILFDPDWNPASDQ-----QALARVWRDGQKKECFVYRFILT 709 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 +++E V QR K + +++ + + Sbjct: 710 GSVEEKVFQRQSQKMKLSASVVDEQEDD 737 >gi|225560868|gb|EEH09149.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus G186AR] Length = 1511 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 18/170 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------G 91 + + W + + I + I++ ++ L ++ Sbjct: 482 DRDVRSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRTRQYGCLRLDGT 541 Query: 92 RTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + K + ++N+ + + G G+NL G N LV F W+ Q Sbjct: 542 MNVTKRQKLVDKFNDPNGEEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ---- 596 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G K+ FVY IA TI+E + QR K ++ ++++ + Sbjct: 597 -QALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 645 >gi|194855241|ref|XP_001968502.1| GG24469 [Drosophila erecta] gi|292630862|sp|B3NAN8|RAD54_DROER RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=Protein okra gi|190660369|gb|EDV57561.1| GG24469 [Drosophila erecta] Length = 784 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 73/227 (32%), Gaps = 43/227 (18%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------------ 52 + +R L + + + + ++ + E+ ++ Sbjct: 432 DQVRRSLA---DCKEKASLTALADITTLKKICSHPNLIYEKITARDKGFENSQNVLPSNY 488 Query: 53 ---------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQ 90 K L+ ++ +++ ++ L ++ Sbjct: 489 NAKDLNPELSGKFMLLDFMLAAIRADGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDG 548 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIE 149 ++ K + +N+ + +S G L G N L F W+ + Sbjct: 549 TMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----D 603 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ ++Y L+A +I+E +LQR K ++ +++ Sbjct: 604 EQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID 650 >gi|268557732|ref|XP_002636856.1| C. briggsae CBR-LET-418 protein [Caenorhabditis briggsae] Length = 1849 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 26/224 (11%), Positives = 66/224 (29%), Gaps = 34/224 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEKH 47 K Y + L + + ++ + N + E Sbjct: 857 KWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKASLEAPKEKNGMYEGT 916 Query: 48 WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + K L+ ++ K +++ + L+ + Sbjct: 917 ALIKNSGKFVLLQKMLRKLKDTGHRVLIFSQMTMMMDILEDFCDVEGYKYERIDGSITGQ 976 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + + G G+NL + ++ + W+ + Sbjct: 977 MRQDAIDRYNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1030 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K V +Y + +N+++E + + K + L++ A Sbjct: 1031 SRAHRLGQKHKVMIYRFVTKNSVEERITTVAKKKMLLNHLVVRA 1074 >gi|311261060|ref|XP_001928941.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Sus scrofa] gi|311261079|ref|XP_001929167.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Sus scrofa] Length = 2583 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 1059 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 1118 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 1119 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1178 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1179 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1235 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1236 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1288 >gi|297694660|ref|XP_002824590.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like isoform 1 [Pongo abelii] Length = 2581 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 1059 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 1118 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 1119 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1178 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1179 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1235 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1236 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1288 >gi|295664715|ref|XP_002792909.1| SNF2 family N-terminal domain containing protein [Paracoccidioides brasiliensis Pb01] gi|226278430|gb|EEH33996.1| SNF2 family N-terminal domain containing protein [Paracoccidioides brasiliensis Pb01] Length = 682 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 67/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + + W + + Sbjct: 384 LKAIGILKKLCNHPDLLNLGADLPGCEQFFPEDYIPIESRGRDRDVRSWYSGKMMVLDRM 443 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L ++ + K + ++N+ + Sbjct: 444 LARIRQDTNDKIVLISNYTQTLDLFERLCRSRQYGCLRLDGSMNVTKRQKLVDKFNDPEG 503 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 504 EEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 557 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 558 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 589 >gi|156845511|ref|XP_001645646.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM 70294] gi|156116312|gb|EDO17788.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM 70294] Length = 941 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 79/243 (32%), Gaps = 55/243 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------------ 43 K Y + +++ +L N D Sbjct: 631 KSYIELRKD---------DSFEKPLKAIGVLKKLCNHPDLLDLESELPEMGDSVSIPDGY 681 Query: 44 ------EEKHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ---- 90 + K + K LE + K N I++ ++ L +++ + Sbjct: 682 VISKNGKSKDVQPQFSGKFAILERFLHKINTESDDKIVLISNYTQTLDLVERLCRRKQYG 741 Query: 91 ------GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 T++K + +N + + G G+NL G N L+ W+ Sbjct: 742 SVRLDGSMTINKRQKLVDRFNSPDSHEFIFLLSSKAGGCGINL-IGANRLILLDPDWNPA 800 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Q + R + G K+ F+Y IA TI+E V QR K ++ +++A K++ Sbjct: 801 ADQ-----QALARVWRDGQKKDCFIYRFIATGTIEEKVYQRQSMKMSLSSCVVDA-KEDV 854 Query: 203 IHV 205 + Sbjct: 855 DRL 857 >gi|51593084|ref|NP_035546.2| probable global transcription activator SNF2L2 isoform 1 [Mus musculus] Length = 1583 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 988 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1047 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1048 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1107 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1108 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1163 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1164 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1212 >gi|195426563|ref|XP_002061395.1| GK20897 [Drosophila willistoni] gi|194157480|gb|EDW72381.1| GK20897 [Drosophila willistoni] Length = 3304 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 71/186 (38%), Gaps = 11/186 (5%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 DL I A + + +Q G + + + K+ V+I + Sbjct: 1710 LDLLHPIISAMTTQFPDPRLIQYDCGKLQTLDR----LLRQLKVDGHRVLIFTQMTKMLD 1765 Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 V F + + +++ ++ +N + +I S G G+NL G + Sbjct: 1766 VLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADT 1824 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ ++ R + G R V +Y L+++ TI+ +L++ K + Sbjct: 1825 VIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTIEVNILKKANQKRMLS 1879 Query: 192 DLLLNA 197 D+ + Sbjct: 1880 DMAIEG 1885 >gi|168053884|ref|XP_001779364.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162669280|gb|EDQ55871.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 719 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 56/144 (38%), Gaps = 17/144 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLF 113 + ++ + S L L+ + + + E+N + I + Sbjct: 554 QQGGHRTLIFSQWTSMLDILEWALDVMGFSYTRLDGSTQVSERQTLVDEFNNDPSIFVFL 613 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G + ++ L ++ + ++R R + G + V +Y L+ + Sbjct: 614 LSTRAGGQGLNLT-GADTVILHDLDFNPQ-----MDRQAEDRCHRIGQSKPVTIYRLVTK 667 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 +T+DE + + + K + +L Sbjct: 668 DTVDESIYKIAQQKLVLDAAVLEG 691 >gi|169600905|ref|XP_001793875.1| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15] gi|160705541|gb|EAT90036.2| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15] Length = 831 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 64/212 (30%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N E K W + + Sbjct: 511 LKVIGMLKKLCNHPDLLELPQDLPGCEHTLPEDFVPKDARGRDREVKVWYSGKMLVLDRM 570 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I I++ ++ L + K + ++N+ + Sbjct: 571 LARIRAETNDKIVLISNYTQTLDIFAALCRSRGYGCLRLDGTMNVSKRQKLVDKFNDPEG 630 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 631 PEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 684 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y I TI+E V QR K ++ ++++ + Sbjct: 685 YRFITTGTIEEKVFQRQSHKQSLSSCVVDSAE 716 >gi|328865915|gb|EGG14301.1| myb domain-containing protein [Dictyostelium fasciculatum] Length = 1343 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAF 88 + +K + K++ L ++ + ++ L Sbjct: 226 LFFPDKRLVQYDCGKLQKLAELLRELKKGGHRALIFTQMTKMLDVFEGFLNLHGYTYVRL 285 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +++ + +N + +I L S G GLNL G + ++F+ W+ Sbjct: 286 DGSTKVERRQLLTERFNKDNRIFLFILSTRSGGLGLNLT-GADTVIFYDTDWNPS----- 339 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ R + G R V +Y LI Q+TI+E +L++ K + D+++ + Sbjct: 340 MDAQAQDRCHRIGQTREVHIYRLITQHTIEENILKKSNQKRQLDDMVIQGGE 391 >gi|326923617|ref|XP_003208031.1| PREDICTED: lymphoid-specific helicase-like [Meleagris gallopavo] Length = 871 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 64/191 (33%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEE----------KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 596 MMLLRKCCNHPYLIEYPLDPATQQFKVDEDLVKNSGKFLLLDRMLPELKKRGHKVLMFSQ 655 Query: 77 FNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 L L D++ Q N+ ++ L + G G+NL Sbjct: 656 MTMMLDILMDYCYLRSFKFSRLDGSMSYSDREENMHQFNNDPEVFLFLVSTRAGGLGINL 715 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 716 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 769 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 770 AKRKLEKLIIH 780 >gi|313237190|emb|CBY12409.1| unnamed protein product [Oikopleura dioica] Length = 1294 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 64/210 (30%), Gaps = 25/210 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HDE 54 +K Y+ F D++ + + + ++ + Sbjct: 383 LKIYNDFLSS--EDVRNALMTRASPLVQCTVLKKICDHPRRMANNAIKDIDLDLLLSESG 440 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQE 103 K++ L +++ I++ L + + + +D + Sbjct: 441 KMQVLADLVDAIIPEKILIFSQSIKILDIIAKILDDKTVNFIRMDGKDKLPIRDEKVKRF 500 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 ++ +I + GL L ++ + W+ + V R + G R Sbjct: 501 QSDKRIKVFMLTTGVGAVGLTLTA-ATRVIVYDPDWNPGR-----DDQAVDRAYRIGQTR 554 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 V V+ LI TI+E + R K +I Sbjct: 555 PVVVFRLITCETIEEKIYSRQLFKKSIISQ 584 >gi|297301486|ref|XP_002805795.1| PREDICTED: TATA-binding protein-associated factor 172-like [Macaca mulatta] Length = 1811 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1491 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 1550 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1551 QHPEFKTTTEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRIL 1610 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1611 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 1670 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1671 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1724 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1725 KIMGLQKFKMNIANTVIS 1742 >gi|195570490|ref|XP_002103240.1| GD19063 [Drosophila simulans] gi|194199167|gb|EDX12743.1| GD19063 [Drosophila simulans] Length = 1403 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 77/252 (30%), Gaps = 58/252 (23%) Query: 1 MKQYHKF----QRELYCDLQGENIEAF---------NSASKTVKCLQLANGAVYYDEEKH 47 ++ Y F ++ L + + + + N + Sbjct: 1088 LRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSE 1147 Query: 48 WKEV----------------HDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLA 82 H K+ AL+ ++ + ++ + L Sbjct: 1148 ELTKVTSQLALTNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLD 1207 Query: 83 RLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 +++ + + +N + I +L G GLNL G Sbjct: 1208 IVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-G 1266 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ M + + R + G K+ V VY LI +N+++E ++ + K Sbjct: 1267 ADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKI 1321 Query: 189 TIQDLLLNALKK 200 + +++A Sbjct: 1322 LTANTVVSAENA 1333 >gi|195451229|ref|XP_002072824.1| GK13479 [Drosophila willistoni] gi|194168909|gb|EDW83810.1| GK13479 [Drosophila willistoni] Length = 1892 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 64/171 (37%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 K K+ L+ ++ K+ +++ + L++ + Sbjct: 1147 SIVVPNKETLITDAGKLFVLDSLLTRLKSEGHRVLIYSQMTKMIDLLEEYMWHRKHRYMR 1206 Query: 96 ---------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I + + G G+NL + ++F+ W+ Sbjct: 1207 LDGSSKISARRDMVADFQTRSDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT---- 1261 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1262 -VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 1311 >gi|28317220|gb|AAO39617.1| GH12153p [Drosophila melanogaster] Length = 1221 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 77/252 (30%), Gaps = 58/252 (23%) Query: 1 MKQYHKF----QRELYCDLQGENIEAF---------NSASKTVKCLQLANGAVYYDEEKH 47 ++ Y F ++ L + + + + N + Sbjct: 906 LRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSE 965 Query: 48 WKEV----------------HDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLA 82 H K+ AL+ ++ + ++ + L Sbjct: 966 ELTKVTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLD 1025 Query: 83 RLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 +++ + + +N + I +L G GLNL G Sbjct: 1026 IVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-G 1084 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ M + + R + G K+ V VY LI +N+++E ++ + K Sbjct: 1085 ADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKI 1139 Query: 189 TIQDLLLNALKK 200 + +++A Sbjct: 1140 LTANTVVSAENA 1151 >gi|146414908|ref|XP_001483424.1| hypothetical protein PGUG_04153 [Meyerozyma guilliermondii ATCC 6260] Length = 990 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 38/226 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK----------TVKCLQLANGAVYYDEEK--------H 47 QR Y + ++I+A N A+K ++ + N ++ + Sbjct: 373 DMQRSWYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPFTTDE 432 Query: 48 WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLD 95 + EK+K L+ ++ ++ + +++ + L Sbjct: 433 HLVYNAEKMKILDQLLKKFQSEGSRVLIFSQMSRMLDILEDYCAFREFQYCRIDGQTDHA 492 Query: 96 KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I E+N+ + + G G+NL +I++ F W+ + + + Sbjct: 493 DRVNAIDEYNKPGSEKFVFLLTTRAGGLGINLTS-ADIVILFDSDWNPQA-----DLQAM 546 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V V+ I +N I+E VL+R K + L++ + Sbjct: 547 DRAHRIGQTKQVKVFRFITENAIEEKVLERAAQKLRLDQLVIQQGR 592 >gi|126273285|ref|XP_001375597.1| PREDICTED: similar to high-mobility group protein 2-like 1, [Monodelphis domestica] Length = 1878 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 75/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + +L N Sbjct: 1557 VQLYEDFAKSRAKCDVDETVSTAALAEETEKPKLKATGHVFQALQYLRKLCNHPALVLTT 1616 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1617 QHPEFKNTTEQLAAQNSSLRDIQHAPKLSALKQLLLDCGLGNTSTSESGTEAVVAQHRIL 1676 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1677 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHV 1736 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1737 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1790 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1791 KIMGLQKFKMNIANTVIS 1808 >gi|195124269|ref|XP_002006616.1| GI18484 [Drosophila mojavensis] gi|193911684|gb|EDW10551.1| GI18484 [Drosophila mojavensis] Length = 603 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 79/221 (35%), Gaps = 36/221 (16%) Query: 6 KFQRELYCDLQ---------GENIEAFNSASKTVKCLQLANGAVYYDEEKH-------WK 49 + QRE Y L I + ++ + N ++ + Sbjct: 281 RMQREWYRKLLLNDIDVMTCYGTISKMRVMNIIMQLRKCVNHPYLFEGVEELPYTTDSNL 340 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKD 97 + K+ L+ ++ + + +++ L L+ + + Sbjct: 341 LKNSGKMLILDKLLMKLQEQGSRVLIFSQMTRMLDILEDYCNWRKFDYCRLDGQTPHEDR 400 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+E+N P + + G G+NL ++++ + W+ + ++ + R Sbjct: 401 DKLIREYNMENSPKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMDR 454 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ LIA+ T+DE +L+ K + ++ Sbjct: 455 AHRIGQKKQVRVFRLIAEKTVDEKILEHANIKLRLDRKVIQ 495 >gi|158300661|ref|XP_320523.4| AGAP012009-PA [Anopheles gambiae str. PEST] gi|157013268|gb|EAA00692.4| AGAP012009-PA [Anopheles gambiae str. PEST] Length = 2037 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 67/222 (30%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 K Y Y L A + + + + N + ++ Sbjct: 1029 KYYKYILTRNYEALNPKGGGGACSLINIMMDLKKCCNHPYLFAAAAEEAQLGPGGNYELQ 1088 Query: 53 -----DEKIKALEVIIE--KANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLD 95 K+ LE ++ K+ +++ L + G T Sbjct: 1089 SLTKAAGKLVLLEKMLRLLKSQGHRVLIFSQMTKMLDILEDFLEGLGYKYERIDGGITGS 1148 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N P + G G+NL + ++ + W+ + Sbjct: 1149 IRQEAIDRFNAPGAPQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1202 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1203 SRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1244 >gi|73986616|ref|XP_867769.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 12 [Canis familiaris] Length = 1600 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 74/217 (34%), Gaps = 28/217 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH--DE 54 Y Q + G + + ++ ++ N + + +++ Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEVRLDLYRASG 1066 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K + L+ I+ K A +++ S + ++ F + ++ Sbjct: 1067 KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK 1126 Query: 103 EWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +NE + + G GLNLQ + ++ F W+ + + R + G Sbjct: 1127 TFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQDRAHRIG 1180 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V L N+++E +L + K + ++ A Sbjct: 1181 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1217 >gi|73998068|ref|XP_543938.2| PREDICTED: similar to helicase, lymphoid-specific isoform 1 [Canis familiaris] Length = 837 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 63/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 563 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKARGHKVLLFSQ 622 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + + +N + + + + G G+NL Sbjct: 623 MTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINL 682 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 683 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 736 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 737 AKRKLEKLIIH 747 >gi|168054197|ref|XP_001779519.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162669101|gb|EDQ55695.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 631 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 62/164 (37%), Gaps = 19/164 (11%) Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 + K +AL ++ + N ++ + + L L+ + Sbjct: 443 DHHVLASAKCQALVKLLPQLKKNGHRPLIFSQWTNMLDILEWALAVIGLRFTRLDGSTPV 502 Query: 95 DKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + E+N I + + G GLNL G + ++ + ++ + ++R Sbjct: 503 TERQNLVDEYNNNPDIFVFLLSTRAGGQGLNLT-GADTVIIHDVDFNPQ-----MDRQAE 556 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V VY L+ T+DE + + + K + +L + Sbjct: 557 DRCHRIGQSKPVTVYRLVTNGTVDESIFRIAQQKLVLDAAVLES 600 >gi|19173110|ref|NP_597661.1| similarity to HELICASE MOT1 [Encephalitozoon cuniculi GB-M1] gi|19168777|emb|CAD26296.1| similarity to HELICASE MOT1 [Encephalitozoon cuniculi GB-M1] Length = 1256 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 86/222 (38%), Gaps = 30/222 (13%) Query: 2 KQYHKFQ----RELY--CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + +E +L+ ++ N K + L LA + + ++ K Sbjct: 1028 KLYREIDEKGGKESLGDAELEYGKVDQKNVGFKRTRDLFLAVSHIGHFKDSTEV---SCK 1084 Query: 56 IKALEVIIE----KANAAPIIVAYHFNS--DLARLQKAFPQGRTLDK---------DPCT 100 +KALE II + + I++ + F S DL + Sbjct: 1085 VKALEDIISLCGGEDLGSKILIFFQFKSTIDLVIKDIMKKYKFKYSRLDGSVPSAARTKI 1144 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +E+N G +LF G GLNL G + +V + W+ + + R + G Sbjct: 1145 AEEFNTGTTQMLFLTTQVGGLGLNLT-GADTVVMYEHDWNP-----FNDLQAMDRAHRIG 1198 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 KR V V+ IA+NT++E V+ K + + L++ + Sbjct: 1199 QKRTVNVFRFIARNTLEEKVMNLQSFKMFVANSLVSQQNADI 1240 >gi|71276170|ref|ZP_00652450.1| SNF2-related [Xylella fastidiosa Dixon] gi|71898329|ref|ZP_00680502.1| SNF2-related [Xylella fastidiosa Ann-1] gi|170730598|ref|YP_001776031.1| hypothetical protein Xfasm12_1485 [Xylella fastidiosa M12] gi|71163088|gb|EAO12810.1| SNF2-related [Xylella fastidiosa Dixon] gi|71731852|gb|EAO33910.1| SNF2-related [Xylella fastidiosa Ann-1] gi|167965391|gb|ACA12401.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 470 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 83/140 (59%), Positives = 109/140 (77%), Gaps = 2/140 (1%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 + Y +++++ L+ G +EAFN+ SKT+KCLQLANGA+Y D+ + W+ VHD K++AL Sbjct: 257 RLYKAMEQDMFIALECGTEVEAFNATSKTIKCLQLANGALYTDDTRQAWEVVHDAKLEAL 316 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 IIE+A P++VAYHF SD+ARLQ+AFP+GR LDK+P TI++WN G IP+LFAHPAS Sbjct: 317 HDIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASA 376 Query: 120 GHGLNLQYGGNILVFFSLWW 139 GHGLNLQ GGNIL FF WW Sbjct: 377 GHGLNLQDGGNILAFFGHWW 396 >gi|328868808|gb|EGG17186.1| chromo domain-containing protein [Dictyostelium fasciculatum] Length = 1716 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 76/220 (34%), Gaps = 29/220 (13%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD------- 53 K Y ++ + +L E + + V+ + N ++ ++ Sbjct: 848 KYYRLILKKNFQELNKGVKGEKTSLLNIVVELKKTCNHPYLFESAENENYNDSLDALIKG 907 Query: 54 ---EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 + +I K +++ L L + + +K Sbjct: 908 SGKLILLDKLLIRLKETGHRVLIFSQMVRMLDILARYLKHRGFLFQRLDGSMSREKRSQA 967 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N P + G G+NL + +V F ++ + + R + Sbjct: 968 MDRFNAEGSPDFCFLLSTRAGGLGINL-STADTVVIFDSDYNPQN-----DLQAEARAHR 1021 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G K AV +Y L+ + T++E +L+R + K + L++ ++ Sbjct: 1022 IGQKNAVNIYRLVTKKTVEEDILERAKQKMVLDHLVIQSM 1061 >gi|301784895|ref|XP_002927862.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Ailuropoda melanoleuca] Length = 2583 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 1059 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 1118 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 1119 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1178 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1179 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1235 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1236 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1288 >gi|282165704|ref|NP_001164100.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Homo sapiens] gi|317373586|sp|Q9HCK8|CHD8_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 8; Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8; AltName: Full=Helicase with SNF2 domain 1 Length = 2581 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 1059 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 1118 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 1119 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1178 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1179 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1235 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1236 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1288 >gi|195154762|ref|XP_002018288.1| GL16841 [Drosophila persimilis] gi|194114084|gb|EDW36127.1| GL16841 [Drosophila persimilis] Length = 2139 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 71/186 (38%), Gaps = 11/186 (5%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 DL I A + + +Q G + + + K+ V+I + Sbjct: 568 LDLLHPIISAMTTQFPDPRLIQYDCGKLQTLDR----LLRQLKVDGHRVLIFTQMTKMLD 623 Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 V F + + +++ ++ +N + +I S G G+NL G + Sbjct: 624 VLEAFLNHHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADT 682 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ ++ R + G R V +Y L+++ TI+ +L++ K + Sbjct: 683 VIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTIEVNILKKANQKRMLS 737 Query: 192 DLLLNA 197 D+ + Sbjct: 738 DMAIEG 743 >gi|119479095|ref|XP_001259576.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Neosartorya fischeri NRRL 181] gi|119407730|gb|EAW17679.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Neosartorya fischeri NRRL 181] Length = 967 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 65/193 (33%), Gaps = 31/193 (16%) Query: 29 TVKCLQLANGAVYY-------DEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNS 79 ++ + + E K L+ +++ +IV +F+ Sbjct: 461 LMELRKCCIHPYLFADAIPSPYELGEHLINQSGKFLVLKKLLQHYVTTETKVIVFSNFDQ 520 Query: 80 DLARLQKAFPQGRTLDK---------------DPCTIQ-EWNEGKIPLLFAHPASCGHGL 123 L + + ++ + N+ + + + G GL Sbjct: 521 CLNLCEDLVMMLQGSNRVFEYARLDGRTTGPWRKVMVHLFQNDPRYKVFLISIRAGGEGL 580 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL +++VF W+ + + R R + G R V +Y L + T++E + +R Sbjct: 581 NLTS-SSVVVFLDEDWNPQ-----VMRQAEARVHRIGQTRPVVIYKLRSTGTVEEQMSRR 634 Query: 184 LRTKSTIQDLLLN 196 L K+ I D + Sbjct: 635 LVKKAYIADRVTE 647 >gi|296207850|ref|XP_002750833.1| PREDICTED: DNA repair and recombination protein RAD54-like [Callithrix jacchus] Length = 746 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 82/233 (35%), Gaps = 43/233 (18%) Query: 2 KQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------------- 45 + Y +F R+ + E + +S S +L N ++ Sbjct: 421 ELYKRFLRQAKPAEELHEGKMSVSSLSSITSLKKLCNHPALIHDKCVEGEDGFEGALDLF 480 Query: 46 ------KHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ------ 90 K + K+ L+ I+ ++ +++ ++ L +K Sbjct: 481 PPGYSSKALEPQLSGKMLVLDYILAVTRSCSSDKVVLVSNYTQTLDLFEKLCRARRYLYV 540 Query: 91 ----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 541 RLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN- 598 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 599 ----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 647 >gi|303271827|ref|XP_003055275.1| predicted protein [Micromonas pusilla CCMP1545] gi|226463249|gb|EEH60527.1| predicted protein [Micromonas pusilla CCMP1545] Length = 571 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 39/201 (19%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEV--------HDEKIKALEVIIE--KANAAPIIVAYH 76 S ++ + N + ++ K+ L+ I+ K +++ Sbjct: 349 SLLMQLRKCCNHPFLFAGTDVPEDGVPIEELVEASGKLAVLDRILRRLKDAGHRVVLFSQ 408 Query: 77 FNSDLAR---------------------LQKAFPQGRTLDKDPCTIQEWNEGKIPLL--F 113 F S L + I +N P+ Sbjct: 409 FTSMLDILSDFLTLRGYQARSIHWFPYDRYARLDGSTNRVQRSVDIAAFNRPNSPMFAFL 468 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NLQ + + F W+ + ++ + R + G K+ V VY LI Sbjct: 469 LSTRAGGLGVNLQT-ADTCILFDSDWNPQ-----VDTQAMARVHRIGQKKPVHVYRLITA 522 Query: 174 NTIDELVLQRLRTKSTIQDLL 194 ++++E + QR K ++ ++ Sbjct: 523 DSVEERMQQRAEKKLFLEQMV 543 >gi|242023690|ref|XP_002432264.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus humanus corporis] gi|212517673|gb|EEB19526.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus humanus corporis] Length = 1999 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 K Y + L + + + + + N + + Sbjct: 959 KYYKWILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFSAAAEEAPLSANGTYELQ 1018 Query: 53 -----DEKIK--ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ + + + + +++ L L+ + Sbjct: 1019 GLIKASGKLILLSKMLKLLREQGHRVLIFSQMTKMLDLLEDYLEGEGYKYERIDGSITGN 1078 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N P + G G+NL + ++ + W+ + Sbjct: 1079 LRQEAIDRFNAPGAPQFAFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1132 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1133 SRAHRIGQSNKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1174 >gi|169606908|ref|XP_001796874.1| hypothetical protein SNOG_06505 [Phaeosphaeria nodorum SN15] gi|160707107|gb|EAT86336.2| hypothetical protein SNOG_06505 [Phaeosphaeria nodorum SN15] Length = 1108 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 77/229 (33%), Gaps = 39/229 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 Q + Y + ++I+A N + ++ + N + Sbjct: 430 DMQVDWYKKILEKDIDAVNGGAGNKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 489 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNS----------DLARLQKAFPQGRTL 94 + K+ L+ ++ KA + +++ + Sbjct: 490 EHLVNNAAKMVMLDRLLKRMKAQGSRVLIFSQMSRVLDIMEDYSVMRGYQYCRIDGSTAH 549 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I ++N+ L + G G+NL +I+V F W+ + + Sbjct: 550 EDRIAAIDDYNKPDSEKFLFLLTTRAGGLGINLTT-ADIVVLFDSDWNPQA-----DLQA 603 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G + V+V+ + + I+E VL+R K + L++ + + Sbjct: 604 MDRAHRIGQTKQVYVFRFVTEGAIEEKVLERAAQKLRLDQLVIQQGRSQ 652 >gi|73946679|ref|XP_860926.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 36 [Canis familiaris] Length = 1596 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1001 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1060 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1061 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1120 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1121 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1176 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1177 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1225 >gi|67538714|ref|XP_663131.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4] gi|40743497|gb|EAA62687.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4] Length = 1776 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + + W + + Sbjct: 535 LKAIGILKKLCNHPDLLNLSTDLPGCEHAFPDDYVPVEARGRDRDVRPWYSGKMMVLDRM 594 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K + K + ++N+ Sbjct: 595 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVKKRQKLVDKFNDPDG 654 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 655 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 708 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 709 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 740 >gi|322697909|gb|EFY89684.1| putative helicase-DNA-binding protein [Metarhizium acridum CQMa 102] Length = 1508 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 73/215 (33%), Gaps = 33/215 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVI 62 + + + N + ++ + Y E K K+ LE + Sbjct: 949 KMNKKERGSLN--NILMQLRKCLCHPFMYSEAIEEKHDDPVVIHRNLVEASAKLLLLEQM 1006 Query: 63 IEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEG--K 108 + K +++ F L ++ + I +NE Sbjct: 1007 LPKLKERGHRVLIFSQFLQQLDIIEDFLIGIGYQYRRLDGNLSSLEKQRRIDAYNEPGSA 1066 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I + G G+NL + ++ ++ + + ++R + G K+ V + Sbjct: 1067 IFAFLLSTRAGGVGINL-ATADTVIIMDPDFNPHQ-----DIQALSRAHRIGQKQKVLCF 1120 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L+ ++T++E ++Q + K + L+ +L + I Sbjct: 1121 QLMTKDTVEERIMQIGKKKMALDHALIESLDDDEI 1155 >gi|297835980|ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp. lyrata] gi|297331712|gb|EFH62131.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp. lyrata] Length = 1721 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 72/229 (31%), Gaps = 34/229 (14%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + DL + + V+ + N ++ H Sbjct: 870 QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKLD 929 Query: 51 ---VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + K+ L+ ++ + +++ L L + + Sbjct: 930 KIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAE 989 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + +V F W+ + + + Sbjct: 990 LRQQAMDHFNAPASDDFCFLLSTRAGGLGINL-ATADTVVIFDSDWNPQN-----DLQAM 1043 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1044 SRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEG 1092 >gi|4733988|gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] Length = 1738 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 72/229 (31%), Gaps = 34/229 (14%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + DL + + V+ + N ++ H Sbjct: 887 QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKLD 946 Query: 51 ---VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + K+ L+ ++ + +++ L L + + Sbjct: 947 KIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAE 1006 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + +V F W+ + + + Sbjct: 1007 LRQQAMDHFNAPASDDFCFLLSTRAGGLGINL-ATADTVVIFDSDWNPQN-----DLQAM 1060 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1061 SRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEG 1109 >gi|260834097|ref|XP_002612048.1| hypothetical protein BRAFLDRAFT_127252 [Branchiostoma floridae] gi|229297421|gb|EEN68057.1| hypothetical protein BRAFLDRAFT_127252 [Branchiostoma floridae] Length = 3715 Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 76/198 (38%), Gaps = 23/198 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ YH+ +R + + +Q G + + K + K Sbjct: 2351 LRCYHRVERGMLTQFPDP------------RLVQYDCGKLQRLD----KLLRQLKQGQHR 2394 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 V+I + V F + + +++ ++ +N + +I + S Sbjct: 2395 VLIFTQMTRMLDVLERFLNYHGHVYLRLDGTTRIEQRQALMERFNADYRIFVFILSTRSG 2454 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G + ++F+ W+ ++ R + G R V +Y L+++ T++E Sbjct: 2455 GIGVNLT-GADTVIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVNIYRLVSERTVEEN 2508 Query: 180 VLQRLRTKSTIQDLLLNA 197 +L++ K + D+ + Sbjct: 2509 ILKKANQKRLLVDVSIEG 2526 >gi|326434418|gb|EGD79988.1| BRG1 protein [Salpingoeca sp. ATCC 50818] Length = 1726 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 62/171 (36%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ------- 90 + K++AL+ ++ K +++ + L+ Sbjct: 1393 RCFHPSMDDLVRDCGKLQALDRLLSRLKKEGHRVLIYSQMTRMIDILEDFMTYRKYKYMR 1452 Query: 91 ----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + D+ + I + G G+NL + ++F+ W+ Sbjct: 1453 LDGSCKISDRRDMVADFQSRDDIFAFILSTRAGGIGINLTA-ADTVIFYDSDWNPT---- 1507 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G R V VY LI + T++E +L R + KS + L++ Sbjct: 1508 -VDQQAMDRAHRLGQTRPVTVYRLITKGTVEERILHRAQEKSKVHQLVIQG 1557 >gi|321256964|ref|XP_003193422.1| helicase [Cryptococcus gattii WM276] gi|317459892|gb|ADV21635.1| Helicase, putative [Cryptococcus gattii WM276] Length = 1238 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPC 99 K++ L ++ K+ +++ L L+ Sbjct: 929 DCGKLQKLFEMLRNLKSEGHRVLIFTQMTRVLDILEMFLSYNGHRYLRLDGSTKIEDRQV 988 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + +I + A S G G+NL G + + F+ W+ ++R + R + Sbjct: 989 LTERFNSDPRIFVFIASSRSGGVGINLT-GADTVFFYDSDWNPS-----MDRQCMDRAHR 1042 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V +Y ++ +T++E +L++ K + +++ Sbjct: 1043 IGQTREVHIYRFVSSHTVEENMLRKAEQKRLLDKMVIQE 1081 >gi|307192391|gb|EFN75626.1| Putative DNA helicase Ino80 [Harpegnathos saltator] Length = 1449 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCT 100 K+ L+ ++ K +++ + L++ + D+ Sbjct: 954 GKLSVLDSLLRRLKEQGHRVLIYSQMTKMIDLLEEYMYHRKHTFMRLDGSSKISDRRDMV 1013 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + + G G+NL + ++F+ W+ +++ + R + G Sbjct: 1014 ADFQKRADIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHRLG 1067 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1068 QTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 1104 >gi|294925769|ref|XP_002779000.1| Chromodomain helicase-DNA-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239887846|gb|EER10795.1| Chromodomain helicase-DNA-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 1042 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 68/222 (30%), Gaps = 35/222 (15%) Query: 4 YHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYY-----DEEKHWKEVH----- 52 Y L G + + V+ + N E + Sbjct: 532 YRAIFERNKTYLSGAQKSGGPSLINLEVQLRKCCNHPFTIDGVEERELAMCQNKDQEFNR 591 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K + +++ F S L +Q+ + Sbjct: 592 MIMASGKMVLLDKLLPKLHAEGHKVLLFSQFLSMLDLIQRYALYRGYSVERLDGSATAKA 651 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + L + G G+NL ++++ F W+ + ++ Sbjct: 652 REEAIDRFNTPESSAFLFLLSTRAGGIGINLTA-ADVVIIFDSDWNPQ-----MDIQATA 705 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + V VY L+ T + + +R K I + + Sbjct: 706 RAHRIGQTKDVKVYRLVTNRTYEAQMFERASQKLGINEAVFQ 747 >gi|73951133|ref|XP_859090.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 5 [Canis familiaris] Length = 1822 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 71/219 (32%), Gaps = 28/219 (12%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------D 53 KQY+K R +G + ++ + N + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENDSFKGRLKYGS 785 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 K+ L+ ++ + +++ L L + + + Sbjct: 786 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 845 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + G G+NL + +V F W+ + + R + Sbjct: 846 DHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQARAHRI 899 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 GQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 938 >gi|126649341|ref|XP_001388342.1| SNF2 helicase [Cryptosporidium parvum Iowa II] gi|32398963|emb|CAD98428.1| SNF2 helicase, possible [Cryptosporidium parvum] gi|126117436|gb|EAZ51536.1| SNF2 helicase, putative [Cryptosporidium parvum Iowa II] Length = 1102 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 77/221 (34%), Gaps = 29/221 (13%) Query: 2 KQYHKFQRELYCDLQGENIE-AFNSASKTVKCLQLANGAVYYD--------EEKHWKEVH 52 + Y + LQ + + ++ + N +D + Sbjct: 435 RLYKDLLSKNVDALQEKEGGGKLRLINLAMQLRKACNHPYLFDGYEDKSVDPFGEHVVEN 494 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDPCT 100 K+ ++ +I+K + + I++ + + D Sbjct: 495 SGKMVLMDRLIKKLVSGGSRILIFSQMARVLDILEDYCHMRGFPYCRIDGNTSGDDRDRQ 554 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N+ + + G G+NL +I++ + W+ + + + R + Sbjct: 555 ISEFNKPNSEKLVFLLSTRAGGLGINL-ATADIVILYDSDWNPQA-----DLQAMDRAHR 608 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ VFV+ L ++TI+E +++R K + ++ + Sbjct: 609 IGQKKPVFVFRLCHEHTIEEKIIERANLKLQLDFAIIQQGR 649 >gi|115944263|ref|XP_001189861.1| PREDICTED: similar to LD32234p, partial [Strongylocentrotus purpuratus] Length = 2083 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 74/201 (36%), Gaps = 24/201 (11%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----HDEKIKALEVIIEK--AN 67 + N+ S +K + E+ K++ ++ ++ K Sbjct: 713 VLNSERTLINTLSSELKPKSWCLHPIENLMRLDMPELRLIQYDCGKLQTMDGLLRKLKTE 772 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHP 116 + +++ L L++ + + ++ +N + +I Sbjct: 773 GSRVLIFTQMTKMLDILERFLNFHGHIYLRLDGTTKVEQRQIMMERFNKDPRIFCFILST 832 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 S G G+NL G N ++F+ W+ ++ R + G R V +Y LI++ +I Sbjct: 833 RSGGMGVNLT-GANAVIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLISEMSI 886 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +L++ K + D+ + Sbjct: 887 EENILKKSNQKRLLIDVSIEG 907 >gi|115678452|ref|XP_788939.2| PREDICTED: similar to LD32234p, partial [Strongylocentrotus purpuratus] Length = 2021 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 74/201 (36%), Gaps = 24/201 (11%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----HDEKIKALEVIIEK--AN 67 + N+ S +K + E+ K++ ++ ++ K Sbjct: 651 VLNSERTLINTLSSELKPKSWCLHPIENLMRLDMPELRLIQYDCGKLQTMDGLLRKLKTE 710 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHP 116 + +++ L L++ + + ++ +N + +I Sbjct: 711 GSRVLIFTQMTKMLDILERFLNFHGHIYLRLDGTTKVEQRQIMMERFNKDPRIFCFILST 770 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 S G G+NL G N ++F+ W+ ++ R + G R V +Y LI++ +I Sbjct: 771 RSGGMGVNLT-GANAVIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLISEMSI 824 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +L++ K + D+ + Sbjct: 825 EENILKKSNQKRLLIDVSIEG 845 >gi|114631899|ref|XP_001151339.1| PREDICTED: helicase, lymphoid-specific isoform 11 [Pan troglodytes] Length = 824 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 511 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 570 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 571 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 630 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 631 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 684 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 685 AKRKLEKLIIH 695 >gi|7243213|dbj|BAA92654.1| KIAA1416 protein [Homo sapiens] Length = 1967 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKH-----WKEVHDE 54 K Y + + L G N + ++ + N + + +KE H+ Sbjct: 454 KYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNA 513 Query: 55 ---------------KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 514 ESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYER 573 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 574 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 630 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V +Y LI +N+ + + + K + +L ++ Sbjct: 631 ---DLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 683 >gi|257095431|ref|YP_003169072.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047955|gb|ACV37143.1| Non-specific serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 842 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 76/201 (37%), Gaps = 20/201 (9%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 L ++ + A + ++ N + D + DE I L+ I A ++V Sbjct: 495 FLSEKDQLRLHCALQNMRMS--CNSSFLLDHQTDDGFKADELIALLDDI-FSDPQAKVVV 551 Query: 74 AYHF--NSDL--------ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 + +L F G DK + +N + + + G G Sbjct: 552 FSQWLRTHELIIRRLAGRDWQHVLFHGGVPGDKRGALVDRFNNDPACRVFL-STDAGGVG 610 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ+ ++V L W+ +Q I R+ + G R V V +A+ TI+E +L Sbjct: 611 LNLQHAAAVVVNMDLPWNPAVLEQRIGRV-----HRLGQTRGVQVINFVARGTIEEGMLS 665 Query: 183 RLRTKSTIQDLLLNALKKETI 203 L K ++ +L+ + + Sbjct: 666 VLAFKQSLFAGVLDGGDSDIV 686 >gi|256080936|ref|XP_002576731.1| DNA repair and recombination protein rad54-related [Schistosoma mansoni] gi|242318369|emb|CAZ32968.2| DNA repair and recombination protein rad54-related [Schistosoma mansoni] Length = 832 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 85/249 (34%), Gaps = 56/249 (22%) Query: 2 KQYHKFQREL---------YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--KHWKE 50 + Y F + + D + + +S + +L N E+ + Sbjct: 496 EVYSDFVKRMAREVSLKMNIADGLRNDKLSISSLASITHLKKLCNHPDLVYEKMTANTDG 555 Query: 51 VHDEK---------------------------IKALEVIIEKANAAPIIVAYHFNSDLAR 83 H+ + L +I+ + +++ ++ L Sbjct: 556 FHNALSYFPANYQGSLESNASVKPELSGKFQVLDCLLAVIKSTTSDKVVLISNYTQTLDL 615 Query: 84 LQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 ++ Q T+ K ++++N+ + + G GLNL G N Sbjct: 616 FERLCLQRGYNFVRLDGTMTIKKRAKVVEQFNDPTSRDFVFMLSSKAGGCGLNL-IGANR 674 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 LV F W+ + + R + G K+ ++Y LI+ TI+E +LQR K + Sbjct: 675 LVMFDPDWNPAN-----DDQAMARVWRDGQKKQCYIYRLISTGTIEEKMLQRQAHKKALS 729 Query: 192 DLLLNALKK 200 +++ ++ Sbjct: 730 SCVVDQQEE 738 >gi|326435418|gb|EGD80988.1| hypothetical protein PTSG_01570 [Salpingoeca sp. ATCC 50818] Length = 1332 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 20/150 (13%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 H K+ + + + + + ++ I +N G + + Sbjct: 953 HSLKLLDIMMDVFRGRGVSYLR--------------MDGNMPTEERQEAINRFNAGTVDV 998 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G+ L N +V F W+ +R R + G + V V LI Sbjct: 999 FLLSTKTANTGITLTR-ANKIVIFDPSWNPA-----EDRQAEHRAWRIGQNQDVEVVRLI 1052 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + TI+EL+ R K + + L + Sbjct: 1053 SSGTIEELMYARQLYKQQLAAVALEGRAQR 1082 >gi|73986614|ref|XP_867761.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 11 [Canis familiaris] Length = 1602 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 72/219 (32%), Gaps = 30/219 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + + Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEQPPLLDLYRA 1066 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K + L+ I+ K A +++ S + ++ F + Sbjct: 1067 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 1126 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +NE + + G GLNLQ + ++ F W+ + + R + Sbjct: 1127 LKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQDRAHR 1180 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V L N+++E +L + K + ++ A Sbjct: 1181 IGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1219 >gi|73946677|ref|XP_860893.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 35 [Canis familiaris] Length = 1584 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 989 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1048 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1049 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1108 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1109 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1164 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1165 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1213 >gi|55771379|dbj|BAD72546.1| chromatin-remodeling factor CHD3 [Oryza sativa Japonica Group] gi|55773904|dbj|BAD72509.1| chromatin-remodeling factor CHD3 [Oryza sativa Japonica Group] Length = 1354 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 29/222 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------VH 52 + Y + Y L + + + ++ +L A DE + Sbjct: 541 EYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLES 600 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCT 100 K++ L+ ++ K +++ F L + + Sbjct: 601 SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIR 660 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + G G+NL + ++ + W+ + + R + Sbjct: 661 IDRFNAKNSTRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAHR 714 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G V +Y L+++ TI+E ++Q + K ++ L++ L K Sbjct: 715 LGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTK 756 >gi|67466735|ref|XP_649509.1| helicase [Entamoeba histolytica HM-1:IMSS] gi|56465969|gb|EAL44123.1| helicase domain-containing protein [Entamoeba histolytica HM-1:IMSS] Length = 759 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 66/187 (35%), Gaps = 23/187 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKH----WKEVHDEKIKALEVII--EKANAAPIIVAYHFNS 79 + ++ N ++ + K+K + ++ K ++ Sbjct: 393 LAAIDTLRKICNHPHLINKTEDLTPETIYKESSKLKYVCDLLKQFKKEGHKALIFCQTRQ 452 Query: 80 DLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 L +++ + +K P I ++N + + + G G+NL G Sbjct: 453 MLNIIEQMMLNENFKYLRMDGLVSSNKRPEYISQFNNDPTVLVFILTTRVGGLGINLT-G 511 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ + W+ ++ R + G R V +Y LI TI+E + Q+ K Sbjct: 512 ADRVIMYDPDWNPT-----VDSQAKERTLRIGQDRDVIIYRLICSGTIEEHIYQKQMAKE 566 Query: 189 TIQDLLL 195 + D +L Sbjct: 567 ILSDKIL 573 >gi|328711442|ref|XP_001943462.2| PREDICTED: DNA repair and recombination protein RAD54B-like [Acyrthosiphon pisum] Length = 842 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 77/229 (33%), Gaps = 42/229 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---------- 51 + Y + +Q + + S ++ N ++ + Sbjct: 517 RLYEETVSYWENRVQEFGLSTISHFSVITMLKKVCNHPELILNNRNNSDTTEETLNQHLN 576 Query: 52 -----------HDEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQGRTLD-- 95 K+ ++ ++++ + ++ ++ L K Sbjct: 577 RTITLKHSLIESSGKLIVVDNLLKELHKNGSEKTVLISYYTQTLDIFVKLCDMKHYKYLR 636 Query: 96 --------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + ++++N +L + G GLNL G + L+ + W+ Q Sbjct: 637 LDGSTATAQRTDIVKKFNNSNSNYSVLLLSAKAGGVGLNL-VGASNLILYDSDWNPASDQ 695 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q + RI + G K+ V +Y L+ TI+E + QR +K+ + + + Sbjct: 696 QAMARIW-----RDGQKKNVHIYRLLTSGTIEEKIFQRQISKTGLSEAI 739 >gi|238878261|gb|EEQ41899.1| DNA repair and recombination protein RAD54 [Candida albicans WO-1] Length = 848 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 73/226 (32%), Gaps = 48/226 (21%) Query: 21 EAFNSASKTVKCLQLANGAVYYD--------------------------EEKHWKEVHDE 54 +L N D + + Sbjct: 546 TGSQPLKAIGMLKKLCNHPDLLDLPEDVEGSEEFIPDDYQSSIAGGSASRNREIQTWFSG 605 Query: 55 KIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K LE ++K N I++ ++ L ++K ++K + Sbjct: 606 KFLILERFLQKINKETDDKIVLISNYTQTLDLIEKMCRYKKYGVLRLDGTMNINKRQKLV 665 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++N+ P + + G G+NL G N LV W+ Q + R + Sbjct: 666 DKFNDPNGPEFIFLLSSKAGGCGINL-IGANRLVLMDPDWNPASDQ-----QALARVWRD 719 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G K+ F+Y I+ TI+E + QR K ++ +++ K++ + Sbjct: 720 GQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDE-KEDVERL 764 >gi|26353950|dbj|BAC40605.1| unnamed protein product [Mus musculus] Length = 594 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 274 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 333 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 334 QHPEFKSTTEKLTVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSSTESGTESVVAQHRIL 393 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 394 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 453 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 454 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 507 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 508 KIMGLQKFKMNIANTVIS 525 >gi|27477070|ref|NP_003963.1| TATA-binding protein-associated factor 172 [Homo sapiens] gi|12643543|sp|O14981|BTAF1_HUMAN RecName: Full=TATA-binding protein-associated factor 172; AltName: Full=ATP-dependent helicase BTAF1; AltName: Full=B-TFIID transcription factor-associated 170 kDa subunit; AltName: Full=TAF(II)170; AltName: Full=TBP-associated factor 172; Short=TAF-172 gi|2920587|gb|AAC04573.1| TBP-associated factor 172 [Homo sapiens] gi|2995136|emb|CAA04475.1| TBP associated factor [Homo sapiens] gi|55959634|emb|CAI14103.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) [Homo sapiens] gi|85567637|gb|AAI12202.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa [Homo sapiens] gi|119570487|gb|EAW50102.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae), isoform CRA_a [Homo sapiens] gi|119570488|gb|EAW50103.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 1849 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1529 VQLYEDFAKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 1588 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1589 QHPEFKTTAEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRIL 1648 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1649 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 1708 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1709 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1762 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1763 KIMGLQKFKMNIANTVIS 1780 >gi|270010554|gb|EFA07002.1| hypothetical protein TcasGA2_TC009972 [Tribolium castaneum] Length = 945 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 66/205 (32%), Gaps = 33/205 (16%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYY--------------DEEKHWKEVHDEKIKALEVII 63 EN N ++ N Y ++K K+ + ++ Sbjct: 468 ENQTRANVLISITALRKICNHPDIYLHAAGEEAEDDQNVCDKKFGYYKKSGKMIVVSALL 527 Query: 64 --EKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWN-EGKIP 110 K +++ + + ++ + I ++N + Sbjct: 528 KIWKKQKHRVLLFTQSRAMITIFEEFLKQQGYTYLKMDGSTAVSSRQPLINKFNEDSSYD 587 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL G + ++ + W+ + R + G ++ V +Y L Sbjct: 588 VFLLTTKVGGLGVNLT-GADRVIIYDPDWNPAT-----DTQARERAWRIGQEKQVTIYRL 641 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 ++ TI+E + QR K + + +L Sbjct: 642 LSAGTIEEKMYQRQVWKQLLSNKVL 666 >gi|170070470|ref|XP_001869591.1| helicase [Culex quinquefasciatus] gi|167866368|gb|EDS29751.1| helicase [Culex quinquefasciatus] Length = 1569 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCT 100 K+ L+ ++ K +++ + L++ + + Sbjct: 1176 GKLAVLDSLLTRLKTQGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMV 1235 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + I + + G G+NL + ++F+ W+ +++ + R + G Sbjct: 1236 ADFQSRTDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHRLG 1289 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1290 QTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 1326 >gi|42407265|dbj|BAD10849.1| lymphoid specific helicase variant6 [Homo sapiens] gi|119570418|gb|EAW50033.1| helicase, lymphoid-specific, isoform CRA_h [Homo sapiens] Length = 740 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 466 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 525 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 526 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 585 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 586 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 639 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 640 AKRKLEKLIIH 650 >gi|309361932|emb|CAP29254.2| CBR-LET-418 protein [Caenorhabditis briggsae AF16] Length = 1863 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 26/224 (11%), Positives = 66/224 (29%), Gaps = 34/224 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEKH 47 K Y + L + + ++ + N + E Sbjct: 862 KWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKASLEAPKEKNGMYEGT 921 Query: 48 WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + K L+ ++ K +++ + L+ + Sbjct: 922 ALIKNSGKFVLLQKMLRKLKDTGHRVLIFSQMTMMMDILEDFCDVEGYKYERIDGSITGQ 981 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + + G G+NL + ++ + W+ + Sbjct: 982 MRQDAIDRYNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1035 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K V +Y + +N+++E + + K + L++ A Sbjct: 1036 SRAHRLGQKHKVMIYRFVTKNSVEERITTVAKKKMLLNHLVVRA 1079 >gi|281345313|gb|EFB20897.1| hypothetical protein PANDA_004205 [Ailuropoda melanoleuca] Length = 1845 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1525 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 1584 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1585 QHPEFKSTTEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESIVAQHRIL 1644 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1645 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 1704 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1705 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1758 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1759 KIMGLQKFKMNIANTVIS 1776 >gi|198430685|ref|XP_002130660.1| PREDICTED: hypothetical protein [Ciona intestinalis] Length = 1867 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 75/223 (33%), Gaps = 32/223 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW----------K 49 KQY+K + +G + + ++ + N A + Sbjct: 747 KQYYKWLLTKNYAALTKGGRGSFTSFCNIIMELKKCCNHAFLVKAPETEATSSEMLLKVL 806 Query: 50 EVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---------- 97 + K+ L+ ++ K N +++ L +Q+ R + Sbjct: 807 LRNSGKMILLDKLLIRLKENGHRVLIFSQMVRMLDIIQEYLVVRRLQFQRLDGSVSSDLR 866 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + G G+NL + ++ F W+ M + R Sbjct: 867 RRALDHFNAEGSEDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----MNDLQAQAR 920 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 921 AHRIGQKNQVNIYRLVCAGSVEEDIIERAKKKMVLDHLVIQRM 963 >gi|73991998|ref|XP_534421.2| PREDICTED: similar to chromodomain helicase DNA binding protein 6 isoform 1 [Canis familiaris] Length = 2713 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 707 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 766 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 767 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 826 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 827 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 883 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 884 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 937 >gi|195121866|ref|XP_002005439.1| GI19071 [Drosophila mojavensis] gi|193910507|gb|EDW09374.1| GI19071 [Drosophila mojavensis] Length = 3199 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 70/186 (37%), Gaps = 11/186 (5%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 L I A + + +Q G + + + K+ V+I + Sbjct: 1655 LALLHPIISAMTTQFPDPRLIQYDCGKLQTLDR----LLRQLKVDGHRVLIFTQMTKMLD 1710 Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 V F + + +++ ++ +N + +I S G G+NL G + Sbjct: 1711 VLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGVNLT-GADT 1769 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ ++ R + G R V +Y L+++ TI+ +L++ K + Sbjct: 1770 VIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTIEVNILKKANQKRMLS 1824 Query: 192 DLLLNA 197 D+ + Sbjct: 1825 DMAIEG 1830 >gi|168058055|ref|XP_001781026.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162667507|gb|EDQ54135.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 808 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 78/226 (34%), Gaps = 36/226 (15%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDEKIKAL 59 ++E + A + + ++ + + + +E K+K L Sbjct: 293 LKKESPKIIGDSPGTATSLQNIVIQLRKACSHPYLFDGIEPEPFQEGEHIVEASGKLKML 352 Query: 60 EVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----PCTIQEWNE------- 106 +VI++K + +++ L LQ + + +N Sbjct: 353 DVILKKLHASGHRVLIFAQMTRTLDILQDYLEYRSYSYERLDGSVRAEERFNAVHSFSAG 412 Query: 107 ----------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 G + + G GLNL G + ++F+ W+ + ++ + R Sbjct: 413 HSKCGGDAKSGSAFVFLLTTRAGGVGLNL-IGADTVIFYEQDWNPQA-----DKQALQRA 466 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G V LI ++TIDE++++R + K + ++ + Sbjct: 467 HRIGQISPVLAINLITRHTIDEVIMRRAKKKLELTCNVIGRDDADL 512 >gi|145602348|ref|XP_359788.2| hypothetical protein MGG_04989 [Magnaporthe oryzae 70-15] gi|145010771|gb|EDJ95427.1| hypothetical protein MGG_04989 [Magnaporthe oryzae 70-15] Length = 1887 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 76/248 (30%), Gaps = 59/248 (23%) Query: 2 KQYHKF-QRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYYDEEKHW-------- 48 K + F ++E + + + +L N + H Sbjct: 1558 KLFEDFTKKESKKITEQAGREDKEAKQHIFQALQYMRKLCNSPALVMKPGHKLYDDTQRI 1617 Query: 49 ---------KEVHDEKIKALEVIIEKA-----------------NAAPIIVAYHFNSDLA 82 VH K+ AL ++ ++ L Sbjct: 1618 LAKQGTSLEDPVHAPKLTALRDLLVDCGIGVEGTDSNDPLYQPIKPHRALIFCQMKEMLD 1677 Query: 83 RLQKAF-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 +Q G +K + ++N + +L + G GLNL G Sbjct: 1678 MVQNTVLKKLLPSVSFLRLDGGVEANKRQDIVNKFNSDPSFDVLLLTTSVGGLGLNLT-G 1736 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ + + + R + G K+ V VY LI + T++E +L R K Sbjct: 1737 ADTVIFVEHDWNPQR-----DLQAMDRAHRIGQKKVVNVYRLITRATLEEKILSLQRFKI 1791 Query: 189 TIQDLLLN 196 + ++N Sbjct: 1792 DVASTVVN 1799 >gi|114651881|ref|XP_001153522.1| PREDICTED: chromodomain helicase DNA binding protein 8 isoform 3 [Pan troglodytes] Length = 2556 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 1034 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 1093 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 1094 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1153 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1154 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1210 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1211 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1263 >gi|414117|emb|CAA51407.1| HBRM [Homo sapiens] Length = 1586 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 973 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1032 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1033 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1092 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1093 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1148 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1149 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1197 >gi|328773251|gb|EGF83288.1| hypothetical protein BATDEDRAFT_84829 [Batrachochytrium dendrobatidis JAM81] Length = 825 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 70/242 (28%), Gaps = 58/242 (23%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------- 52 Y + + + + N +K Q N + + Sbjct: 572 YDGLLNSIKKEAKDQQ---GNILIYILKLRQACNHFSLIGSTADDEPIPDSIPTLSDLSK 628 Query: 53 -----------------------DEKIKALEVIIEKANAA----PIIVAYHFNSDLA--- 82 K + I+ + IV F S L Sbjct: 629 FLTNLKLEPTETKLDSLESTTVSSTKCDEVVRILAENQKNSNVSKTIVFSQFTSMLNVIQ 688 Query: 83 -------RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVF 134 L + G + T+ + + I ++ G+NL N ++ Sbjct: 689 NALDETDILYCRYDGGMKRKEREQTLFHFKSSEKINVMLISTKCGAAGINLT-CANFVIL 747 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ M+E + R + G + V V L+ ++TI+E V+++ + K + + Sbjct: 748 VDPWWNP-----MMEEQAIGRVHRIGQRNPVHVVRLVMKDTIEEKVMEKQKQKLDMIEGT 802 Query: 195 LN 196 + Sbjct: 803 IG 804 >gi|119596382|gb|EAW75976.1| chromodomain helicase DNA binding protein 6, isoform CRA_c [Homo sapiens] Length = 2750 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 744 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 803 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 804 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 863 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 864 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 920 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 921 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 974 >gi|159126737|gb|EDP51853.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Aspergillus fumigatus A1163] Length = 986 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 31/193 (16%) Query: 29 TVKCLQLANGAVYY-------DEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNS 79 ++ + + E K L+ +++ +IV +F+ Sbjct: 496 LMELRKCCIHPYLFADAIPSPYELGEHLIHQSGKFLVLKKLLQYYVTTETKVIVFSNFDQ 555 Query: 80 DLARLQKAFPQGRTLDK---------------DPCTIQ-EWNEGKIPLLFAHPASCGHGL 123 L + + ++ + N+ + + + G GL Sbjct: 556 CLNLCEDLVMMLQGSNRAFEYARLDGRTTGPWRKVMVHLFQNDPRYKVFLVSIRAGGEGL 615 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL +++VF W+ + + R R + G R V +Y L + T++E + +R Sbjct: 616 NLTS-SSVVVFLDEDWNPQ-----VMRQAEARVHRIGQTRPVVIYKLRSAGTVEEQMSRR 669 Query: 184 LRTKSTIQDLLLN 196 L K+ + D + Sbjct: 670 LVKKAYVADRVTE 682 >gi|291398984|ref|XP_002715711.1| PREDICTED: RAD54-like protein [Oryctolagus cuniculus] Length = 755 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 82/233 (35%), Gaps = 43/233 (18%) Query: 2 KQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y +F R+ + E + +S S +L N ++ +E Sbjct: 430 ELYKRFLRQAKPAEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVEEEDGFEGALDIF 489 Query: 53 -------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ------ 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 490 PPGYNSKAIEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYV 549 Query: 91 ----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 550 RLDGTMSIKKRAKVVERFNSPTSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN- 607 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 608 ----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 656 >gi|194761570|ref|XP_001963002.1| GF14153 [Drosophila ananassae] gi|190616699|gb|EDV32223.1| GF14153 [Drosophila ananassae] Length = 842 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 68/183 (37%), Gaps = 20/183 (10%) Query: 34 QLAN-GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----- 85 QL N +Y + K L+ ++ K +++ F L ++ Sbjct: 629 QLCNKHELYDVKIPDPLICDSGKFGYLDELLPKLREEGHRVLLFSQFTMMLDIVEEYLRV 688 Query: 86 -----KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + I ++N + I + + G G+NL + + + + Sbjct: 689 RNHGFCRLDGSTAVKERQDLITDFNVDDNIFVFLLSTKAGGVGINLTA-ADTCIIHDIDF 747 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++ R + G +R V +Y LI+++TI+E +L K ++ + ++ K Sbjct: 748 NP-----YNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSSEK 802 Query: 200 KET 202 E Sbjct: 803 GEV 805 >gi|114631889|ref|XP_001151071.1| PREDICTED: helicase, lymphoid-specific isoform 7 [Pan troglodytes] Length = 740 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 466 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 525 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 526 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 585 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 586 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 639 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 640 AKRKLEKLIIH 650 >gi|37542684|gb|AAL47211.1| chromatin-remodeling factor CHD3 [Oryza sativa] Length = 1360 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 29/222 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------VH 52 + Y + Y L + + + ++ +L A DE + Sbjct: 547 EYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLES 606 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCT 100 K++ L+ ++ K +++ F L + + Sbjct: 607 SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIR 666 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + G G+NL + ++ + W+ + + R + Sbjct: 667 IDRFNAKNSTRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAHR 720 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G V +Y L+++ TI+E ++Q + K ++ L++ L K Sbjct: 721 LGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTK 762 >gi|308512703|gb|ADO33005.1| cockayne syndrome protein [Biston betularia] Length = 954 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 30/194 (15%) Query: 26 ASKTVKCLQLANGAVYY-----------DEEKHWKEVHDEKIKALEVII--EKANAAPII 72 ++ N Y DEEK K+ + ++ + + Sbjct: 470 LVALSTLRKICNHPDLYLYEAQEDLEAIDEEKFGHWKRSGKMTVVNSLLKIWQKQGHRAL 529 Query: 73 VAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGH 121 + + L L++ + + I+ +N + + + G Sbjct: 530 IFSQSRAMLCVLEQYLQSQNFKYLKMDGSVLVSQRQSLIKTFNENAEYLVFLSTTRVGGL 589 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL G + ++ + W+ + R + G +R V VY L+ TI+E + Sbjct: 590 GVNLT-GADRVIVYDPDWNPAT-----DDQAKERAWRIGQERTVTVYRLLCAGTIEEKIY 643 Query: 182 QRLRTKSTIQDLLL 195 QR K + + +L Sbjct: 644 QRQIFKHFLSNKIL 657 >gi|258568006|ref|XP_002584747.1| DNA repair and recombination protein RAD54 [Uncinocarpus reesii 1704] gi|237906193|gb|EEP80594.1| DNA repair and recombination protein RAD54 [Uncinocarpus reesii 1704] Length = 1534 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 65/212 (30%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 370 LKAIGILKKLCNHPDLLNLSADLPGCEQFFPDDFVPPEGRGRDRDVKSWYSGKMMVLDRM 429 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L ++ + K + ++N+ Sbjct: 430 LARIRQDTNDKIVLISNYTQTLDLFERLCRSRGYGSLRLDGTMNVKKRQKLVDKFNDPNG 489 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 490 EEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 543 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K + ++++ + Sbjct: 544 YRFIATGSIEEKIFQRQSHKQLLSSCVVDSAE 575 >gi|114682041|ref|XP_001148020.1| PREDICTED: chromodomain helicase DNA binding protein 6 isoform 2 [Pan troglodytes] Length = 2693 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 687 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 746 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 747 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 806 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 807 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 863 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 864 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 917 >gi|73998226|ref|XP_543929.2| PREDICTED: similar to TATA-binding-protein-associated factor 172 (TBP-associated factor 172) (TAF-172) (TAF(II)170) (B-TFIID transcription factor-associated 170 kDa subunit) [Canis familiaris] Length = 1849 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1529 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 1588 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1589 QHPEFKSTTEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRIL 1648 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1649 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 1708 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1709 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1762 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1763 KIMGLQKFKMNIANTVIS 1780 >gi|322492128|emb|CBZ27402.1| DNA repair and recombination protein RAD54,putative [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1130 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 18/149 (12%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKI 109 + + +++ +F L + + K + +N Sbjct: 808 DELKRNGEHDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVPGS 867 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N L+ F W+ + + R + G K+ VF+ Sbjct: 868 QEVVFLLSSKAGGVGLNL-IGANRLILFDPDWNPAN-----DAQAMGRVWRDGQKKRVFI 921 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y L++ TI+E + QR +K + +++ Sbjct: 922 YRLLSTGTIEEKIYQRQVSKQGLSANVVD 950 >gi|317498269|ref|ZP_07956568.1| SNF2 family domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316894478|gb|EFV16661.1| SNF2 family domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 438 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 84/213 (39%), Gaps = 24/213 (11%) Query: 2 KQYHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + +R+ Y DL G + I A +K ++ QL G + D+ + V+ K+ AL Sbjct: 225 ELYDRIKRDSYADLDGGDHITATTVLTKLLRLQQLTGGFLLQDDSETPVLVNKAKLNALA 284 Query: 61 VIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI--------------QE 103 IIE + +++ F ++ + + + +K I Q Sbjct: 285 DIIEDYVIGSEKKLVIFARFIPEVKAIIEMVDKLLPKNKKQVAIYGDIKKELRGGLVKQF 344 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G G+ L + V++S ++ + Q + RI + G + Sbjct: 345 QEDPDTMVFVGQIDTAGTGITLTA-ADTCVYYSKNYNYATYSQSLSRI-----HRIGQRN 398 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L + T+DE++ + L K + +++ Sbjct: 399 VCTYIDLEVEKTVDEMINKALSKKEDMAKTVVD 431 >gi|189091948|ref|XP_001929807.1| hypothetical protein [Podospora anserina S mat+] gi|27803083|emb|CAD60786.1| unnamed protein product [Podospora anserina] gi|188219327|emb|CAP49307.1| unnamed protein product [Podospora anserina S mat+] Length = 800 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 L N + K W + + + Sbjct: 506 LKAIGILKNLCNHPDLLKLPDDLPGSEQHYPDDYVPRDSRGRDRDIKPWYSGKMQVLDRM 565 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I I++ ++ L +K ++K + ++N+ Sbjct: 566 LARIRADTNDKIVLISNYTQTLDLFEKLCRSRAYPCLRLDGKMLVNKRQKLVDKFNDPNG 625 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 626 DEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 679 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 680 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 711 >gi|218197711|gb|EEC80138.1| hypothetical protein OsI_21929 [Oryza sativa Indica Group] gi|222635083|gb|EEE65215.1| hypothetical protein OsJ_20361 [Oryza sativa Japonica Group] Length = 1309 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 29/222 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------VH 52 + Y + Y L + + + ++ +L A DE + Sbjct: 496 EYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLES 555 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCT 100 K++ L+ ++ K +++ F L + + Sbjct: 556 SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIR 615 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + G G+NL + ++ + W+ + + R + Sbjct: 616 IDRFNAKNSTRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAHR 669 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G V +Y L+++ TI+E ++Q + K ++ L++ L K Sbjct: 670 LGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTK 711 >gi|194205833|ref|XP_001502326.2| PREDICTED: helicase, lymphoid-specific isoform 1 [Equus caballus] Length = 837 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 63/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 563 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKTRGHKVLLFSQ 622 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + + +N + + + + G G+NL Sbjct: 623 MTRMLDILMDYCHFRDFNFSRLDGSMSYSEREKNMHNFNTDPDVFIFLVSTRAGGLGINL 682 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 683 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 736 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 737 AKRKLEKLIIH 747 >gi|256072692|ref|XP_002572668.1| chromodomain helicase DNA binding protein [Schistosoma mansoni] gi|238657831|emb|CAZ28900.1| chromodomain helicase DNA binding protein, putative [Schistosoma mansoni] Length = 1958 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 41/229 (17%) Query: 7 FQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKHWKE 50 QR LY + E + N + V ++ N E E Sbjct: 735 LQRRLYKYILTSNYEELRCGNLMNSIVHLQKVCNHPYLMQIGDSIAPRLNLNDETNGPYE 794 Query: 51 VH-----DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L ++ + +++ F L L++ R Sbjct: 795 PKALVQVSSKLVVLMELLRGLFVDDHRVLIFSRFTMMLDLLEQVMINARYKYVRIDGRVR 854 Query: 98 ----PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 TI +N + + G G+NL + +V + W+ + + Sbjct: 855 GPLRQVTIDRFNAPDSEYFIFLLSTRAGGEGINL-ASADTVVLYDSDWNPQ-----WDLQ 908 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++R + G + V +Y I +++I+E + Q R K + L+++ +K Sbjct: 909 ALSRAHRIGQSKHVVIYRFITRHSIEEKISQVARRKLALTQLIVDHNQK 957 >gi|81884744|sp|Q6DIC0|SMCA2_MOUSE RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 gi|49523317|gb|AAH75641.1| Smarca2 protein [Mus musculus] Length = 1577 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 982 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1041 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1042 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1101 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1102 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1157 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1158 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1206 >gi|48255900|ref|NP_003061.3| probable global transcription activator SNF2L2 isoform a [Homo sapiens] gi|212276472|sp|P51531|SMCA2_HUMAN RecName: Full=Probable global transcription activator SNF2L2; AltName: Full=ATP-dependent helicase SMARCA2; AltName: Full=BRG1-associated factor 190B; Short=BAF190B; AltName: Full=Protein brahma homolog; Short=hBRM; AltName: Full=SNF2-alpha; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 gi|55957477|emb|CAI14599.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Homo sapiens] gi|55958982|emb|CAI12967.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Homo sapiens] gi|119579215|gb|EAW58811.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, isoform CRA_a [Homo sapiens] gi|119579218|gb|EAW58814.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, isoform CRA_a [Homo sapiens] Length = 1590 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 977 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1036 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1037 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1096 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1097 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1152 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1153 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1201 >gi|156549903|ref|XP_001601964.1| PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] Length = 899 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 72/204 (35%), Gaps = 38/204 (18%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH------------------DEKIKALEVIIE--K 65 + ++ N + EK K+K ++ I + K Sbjct: 590 LTVITALKKVCNHPYLFTSEKSNILDEVLPSVPTNLSAINTSYSYSSKVKVVQAIFQAIK 649 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN--EGKIPLLF 113 +++ +F L L+K + +N + L Sbjct: 650 RTNEKVVLVSYFTQTLDFLEKVCCTEGLQFCRLDGHTPAASRTKLVDRFNSKDNSFCLFL 709 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL G + L+ F W+ + + R + G KR+VF+Y L+ Sbjct: 710 LSAKAGGVGLNL-VGASRLILFDSDWNPAN-----DAQAMARIWRDGQKRSVFIYRLLTT 763 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 TI+E + QR +K+ + + +++A Sbjct: 764 GTIEEKIYQRQISKTGLSEAVVDA 787 >gi|76879794|dbj|BAE45737.1| putative protein product of Nbla10143 [Homo sapiens] Length = 372 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 98 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 157 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 158 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 217 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 218 TA-ADTVIIYDSDWNPQS-----DPQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 271 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 272 AKRKLEKLIIH 282 >gi|301122081|ref|XP_002908767.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora infestans T30-4] gi|262099529|gb|EEY57581.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora infestans T30-4] Length = 1788 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 26/230 (11%), Positives = 69/230 (30%), Gaps = 36/230 (15%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVY--------------YDEE 45 + Y L G N + ++ + N + Sbjct: 694 QWYRAIYERNTSFLNRGGNPRNVPNLMNVMMELRKCCNHPYLNNGVEEILNEGLTTDTQR 753 Query: 46 KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ ++ ++ + N +++ L ++ L + Sbjct: 754 HEMLVKCCGKMVLIDKLLPRLNDGGHKVLIFSQMVRVLDIIEDYLRYCGYLYERLDGNIR 813 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + + ++ + G GLNL + ++ F W+ + + Sbjct: 814 GNDRQAAVDRFVKPEYKRFVMLLSTKAGGLGLNLTA-ADTVIIFDSDWNPQN-----DLQ 867 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G +V +Y LI + T + + + K + +L +++E Sbjct: 868 AQARAHRIGQTHSVKIYRLITRKTYEMHMFHKASLKLGLDKAVLTHMRRE 917 >gi|73986600|ref|XP_867692.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 4 [Canis familiaris] Length = 1603 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 73/218 (33%), Gaps = 29/218 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEV---HD 53 Y Q + G + + ++ ++ N + + ++ Sbjct: 1009 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIESFQLDLYRAS 1068 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K + L+ I+ K A +++ S + ++ F + + Sbjct: 1069 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1128 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +NE + + G GLNLQ + ++ F W+ + + R + Sbjct: 1129 KTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQDRAHRI 1182 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V L N+++E +L + K + ++ A Sbjct: 1183 GQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1220 >gi|8953897|gb|AAF82185.1| helicase DOMINO A [Drosophila melanogaster] Length = 3201 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 69/184 (37%), Gaps = 19/184 (10%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K + + + + K++ ++ ++ + N +++ L L Sbjct: 1631 AKLALLHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVL 1690 Query: 85 QKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + + ++ +N + +I S G G+NL G + ++ Sbjct: 1691 EAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADTVI 1749 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F+ W+ ++ R + G R V +Y L+++ TI+ +L++ K + D+ Sbjct: 1750 FYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDM 1804 Query: 194 LLNA 197 + Sbjct: 1805 AIEG 1808 >gi|296220759|ref|XP_002756460.1| PREDICTED: TATA-binding protein-associated factor 172 [Callithrix jacchus] Length = 1849 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1529 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 1588 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1589 QHPEFKTTTEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRIL 1648 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1649 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 1708 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1709 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1762 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1763 KIMGLQKFKMNIANTVIS 1780 >gi|158286564|ref|XP_308811.4| AGAP006945-PA [Anopheles gambiae str. PEST] gi|157020528|gb|EAA04280.4| AGAP006945-PA [Anopheles gambiae str. PEST] Length = 871 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 70/226 (30%), Gaps = 41/226 (18%) Query: 6 KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKH---------------- 47 + R E A + ++ N + Sbjct: 515 QLTRTALSFYDSEKGADNAVSPLQLITILKKICNHPSLVSVQGKGDPESLVHLLAEQLPP 574 Query: 48 ---WKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR----------LQKAFPQGR 92 K+ +E ++E I++ +++ L Sbjct: 575 WQRMGPTDSAKLGIVEALLEAMLAMQEKIVIVSYYSKTLDMIGGLCDHYNYKYCRLDGST 634 Query: 93 TLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + +N +L + G GLNL G + LV + W+ + Sbjct: 635 AGPDRSRIVAAFNNPANDSFILLLSAKAGGAGLNL-IGASRLVLYDNDWNPAN-----DL 688 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G ++ VF+Y L+ +I+E + QR +K+++ +++ Sbjct: 689 QAMSRVWRDGQRKPVFIYRLLTAYSIEERIFQRQISKTSLSGTVVD 734 >gi|322698448|gb|EFY90218.1| TBP associated factor (Mot1), putative [Metarhizium acridum CQMa 102] Length = 1893 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 78/248 (31%), Gaps = 59/248 (23%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWK------- 49 K + F ++ LQ + + +L N + Sbjct: 1565 KLFEDFTKKQGKKLQSEAGRDDKEAKQHIFQALQYMRKLCNSPAMVMKPGTPVYDDTQKI 1624 Query: 50 ----------EVHDEKIKALEVII-----------------EKANAAPIIVAYHFNSDLA 82 +H K+ AL+ ++ + ++ L Sbjct: 1625 LQRQGTSIEDTIHAPKLTALKDLLVDCGIGGDDGDTNDPLYQPIKPHRALIFCQMKEMLD 1684 Query: 83 RLQKAF-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 ++K +K + ++N + +L + G GLNL G Sbjct: 1685 MVEKKVLKELLPSVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT-G 1743 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R K Sbjct: 1744 ADTVIFVEHDWNPQK-----DLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKI 1798 Query: 189 TIQDLLLN 196 + ++N Sbjct: 1799 DVASTVVN 1806 >gi|301761472|ref|XP_002916159.1| PREDICTED: TATA-binding protein-associated factor 172-like [Ailuropoda melanoleuca] Length = 1865 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1545 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 1604 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1605 QHPEFKSTTEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESIVAQHRIL 1664 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1665 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 1724 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1725 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1778 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1779 KIMGLQKFKMNIANTVIS 1796 >gi|195486513|ref|XP_002091544.1| domino [Drosophila yakuba] gi|194177645|gb|EDW91256.1| domino [Drosophila yakuba] Length = 3195 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 67/179 (37%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 + + + + K++ ++ ++ + N ++V L L+ Sbjct: 1642 LHPITSAMTTQFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLVFTQMTKMLDVLESFLN 1701 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ +N + +I S G G+NL G + ++F+ Sbjct: 1702 YHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSD 1760 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1761 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLTDMAIEG 1814 >gi|296422807|ref|XP_002840950.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637177|emb|CAZ85141.1| unnamed protein product [Tuber melanosporum] Length = 1046 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 27/225 (12%), Positives = 73/225 (32%), Gaps = 36/225 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK----IKA 58 Y +F + + + ++ ++ N ++ + +K Sbjct: 652 LYEEFMSMAKTRETLASGNYLSIINCLMQLRKVCNHPDLFETRQIVTSFAMQKSVVADYE 711 Query: 59 LEVIIEKAN---------------AAPIIVAYHFNSDLARLQKAFPQGRTLD-------- 95 ++ ++ ++ L L++ Sbjct: 712 VKELLYDCGKLQRLDLLLRQLQAGGHRALIFTQMTKVLDILEQFLNIHGHRYLRLDGATK 771 Query: 96 --KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +N +I + S G G+NL G + ++F+ L W+ +++ Sbjct: 772 VEQRQILTDRFNNDTRILVFILSTRSGGLGINLT-GADTVIFYDLDWNPA-----MDKQC 825 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 826 QDRCHRIGQTRDVHIYRFVSEYTIESNILRKSNQKRMLDDVVIQE 870 >gi|281203782|gb|EFA77978.1| myb domain-containing protein [Polysphondylium pallidum PN500] Length = 2536 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 68/224 (30%), Gaps = 36/224 (16%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 K Y + + L +G + + ++ + N + + Sbjct: 687 KYYRAIYEKNFTFLRKGGKGNGPSLLNIMMELRKCCNHPYLIKGAEDSETSMLMKNSDAI 746 Query: 53 -------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ ++ ++ K +++ S L L L + Sbjct: 747 YHKLIQASGKLVLIDKLLPKLKAGNHKVLIFSQMVSVLDILDDYLTFRGYLHERIDGSIK 806 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I ++ + + G G+NL + ++ F W+ + + Sbjct: 807 AEDRQAAIDRFSAPDSDRFVFLLCTRAGGMGINLTA-ADTVIIFDSDWNPQN-----DLQ 860 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + V VY L+ +NT + ++ R K + +L Sbjct: 861 AQARCHRIGQDKMVKVYRLVTRNTYERIMFDRASKKLGLDRAVL 904 >gi|241950361|ref|XP_002417903.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and recombination protein, putative [Candida dubliniensis CD36] gi|223641241|emb|CAX45621.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and recombination protein, putative [Candida dubliniensis CD36] Length = 839 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 73/221 (33%), Gaps = 48/221 (21%) Query: 26 ASKTVKCLQLANGAVYYD--------------------------EEKHWKEVHDEKIKAL 59 +L N D + + K L Sbjct: 542 LKAIGMLKKLCNHPDLLDLPDDIEGSADLIPDDYQSSIAGGSAGRNREIQTWFSGKFLIL 601 Query: 60 EVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 E + K N I++ ++ L ++K ++K + ++N+ Sbjct: 602 ERFLRKINKETDDKIVLISNYTQTLDLIEKMCRYKKYGVLRLDGTMNINKRQKLVDKFND 661 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + + G G+NL G N LV W+ Q + R + G K+ Sbjct: 662 PNGPEFIFLLSSKAGGCGINL-IGANRLVLIDPDWNPASDQ-----QALARVWRDGQKKD 715 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 F+Y LI+ TI+E + QR K ++ +++ K++ + Sbjct: 716 CFIYRLISTGTIEEKIFQRQSMKMSLSSCVVDE-KEDVERL 755 >gi|123977054|ref|XP_001330700.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] gi|121897443|gb|EAY02564.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] Length = 822 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 66/185 (35%), Gaps = 19/185 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVH-DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ--- 85 ++ N +DE+K+ K K L I+ ++ L+ L+ Sbjct: 460 LQEICNHPNIFDEQKYSTNPKMSCKTKLLMKILPQWHKEGHRCLLFAQSLKMLSILEEIM 519 Query: 86 ------KAFPQGRTLDKDPCTI-QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 G T + I +N G G G+NL G + ++ Sbjct: 520 TNLNLEFFRMDGDTPPERRIVIMDRFNHGDKFACLLSKKVGGLGINLT-GADRVIIIEPD 578 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ + + R + G ++V VY LI TI+E + ++ K + + ++ Sbjct: 579 WNPST-----DEQALERAYRIGQTKSVSVYRLICVGTIEEKIYKKQIFKQILSNTIMQDA 633 Query: 199 KKETI 203 +++ + Sbjct: 634 RQKRL 638 >gi|322707181|gb|EFY98760.1| TBP associated factor (Mot1), putative [Metarhizium anisopliae ARSEF 23] Length = 1895 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 78/248 (31%), Gaps = 59/248 (23%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWK------- 49 K + F ++ LQ + + +L N + Sbjct: 1567 KLFEDFTKKQGKKLQSEAGRDDKEAKQHIFQALQYMRKLCNSPAMVMKPGTPVYDDTQKI 1626 Query: 50 ----------EVHDEKIKALEVII-----------------EKANAAPIIVAYHFNSDLA 82 +H K+ AL+ ++ + ++ L Sbjct: 1627 LQRQGTSIEDTIHAPKLTALKDLLVDCGIGGDDGDTNDPLYQPIKPHRALIFCQMKEMLD 1686 Query: 83 RLQKAF-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 ++K +K + ++N + +L + G GLNL G Sbjct: 1687 MVEKKVLKELLPSVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT-G 1745 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R K Sbjct: 1746 ADTVIFVEHDWNPQK-----DLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKI 1800 Query: 189 TIQDLLLN 196 + ++N Sbjct: 1801 DVASTVVN 1808 >gi|297833338|ref|XP_002884551.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297330391|gb|EFH60810.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 1130 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 79/214 (36%), Gaps = 26/214 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIK 57 Y + LQ + ++ + + T++ + N + + K + Sbjct: 686 YKQVTDMGRVGLQTGSGKSKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGKFE 745 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN 105 L+ ++ K I++ + D+ ++++N Sbjct: 746 LLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFN 805 Query: 106 EGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E P + G GLNLQ + ++ F W+ + +++ R + G K+ Sbjct: 806 EPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQKK 859 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +I+E++L+R + K I ++ A Sbjct: 860 EVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 893 >gi|254570653|ref|XP_002492436.1| DNA-dependent ATPase [Pichia pastoris GS115] gi|238032234|emb|CAY70235.1| DNA-dependent ATPase [Pichia pastoris GS115] gi|328353550|emb|CCA39948.1| DNA repair and recombination protein RAD54 and RAD54-like protein [Pichia pastoris CBS 7435] Length = 838 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 73/234 (31%), Gaps = 45/234 (19%) Query: 3 QYHKF-QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---------- 51 Y +F + L E S +L + + + Sbjct: 520 LYQRFTASKSISKLVKEVGGGAQSLQSIGLLKKLCTHPNLLNLPEDIEGCENLLPDDYDY 579 Query: 52 -------------HDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQG---- 91 H K L+ + K N I++ ++ L ++K Sbjct: 580 GHGNRRNREVQVWHSSKFLILQRFLYKINKETNDKIVIISNYTQTLDLIEKLCISSRYGS 639 Query: 92 ------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++K + ++N + + + G G+NL G N L+ W+ Sbjct: 640 LRLDGTMNINKRQKLVDKFNNPEGKEFVFLLSSKAGGCGINL-IGANRLILVDPDWNPAS 698 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q + R + G + F+Y IA +I+E + QR K + ++++ Sbjct: 699 DQ-----QALARVWRDGQTKNCFIYRFIATGSIEEKIFQRQSAKLQLSSCVVDS 747 >gi|189188400|ref|XP_001930539.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972145|gb|EDU39644.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1794 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 57/150 (38%), Gaps = 20/150 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCTIQEWN-E 106 + E + +V L +Q G K + ++N + Sbjct: 1559 DLPEAVSQHRALVFCQMKEMLDMVQHNVLEKLLPSVQFMRLDGGVEATKRQEIVNKFNTD 1618 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL G + ++F W+ ++ + + R + G K+ V Sbjct: 1619 PSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVN 1672 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY ++ + T++E +L R K I ++N Sbjct: 1673 VYRIVTRGTLEEKILNLQRFKIDIASTVVN 1702 >gi|50551961|ref|XP_503455.1| YALI0E02332p [Yarrowia lipolytica] gi|49649324|emb|CAG79034.1| YALI0E02332p [Yarrowia lipolytica] Length = 1028 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 79/226 (34%), Gaps = 31/226 (13%) Query: 1 MKQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 +K Y K + + G + + ++ + N + Sbjct: 396 VKWYQKILEKDIDAVNGQIGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 455 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDP 98 + K+ L+ ++ + + +++ + L + G+T +D Sbjct: 456 VYNAGKMVILDKLLKRIQEQGSRVLIFSQMSRVLDILEDYCLFRGYKYCRIDGQTAHEDR 515 Query: 99 -CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I +N+ + + G G+NL + +V + W+ + + + R Sbjct: 516 INAIDAYNKEGSEKFVFLLTTRAGGLGINLTT-ADQVVLYDSDWNPQA-----DLQAMDR 569 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G + V+VY I +N ++E V++R K + L++ + + Sbjct: 570 AHRIGQTKQVYVYRFITENAVEEKVIERATQKLRLDKLVIQQGRSQ 615 >gi|169621462|ref|XP_001804141.1| hypothetical protein SNOG_13941 [Phaeosphaeria nodorum SN15] gi|160704260|gb|EAT78566.2| hypothetical protein SNOG_13941 [Phaeosphaeria nodorum SN15] Length = 1274 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 35/222 (15%) Query: 7 FQRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYY-------DEEKHWKEVHDEKIK 57 ++ + + +++ + ++ + + K Sbjct: 612 MRQTIEKEQGSSEVKSAWQKLMNLVMQLRKCCSHPYLLPRVSPDPYYLGDHIIRASGKFI 671 Query: 58 ALEVIIEK---ANAAPIIVAYHFNSDLARLQK---------------AFPQGRTLDKDPC 99 LE +I+ +++ F L + F K Sbjct: 672 LLEKLIKHTVMNQGKKVLIFSGFTRTLDYTEDLLSLISNHGRDFKHLRFDGSTARAKRNL 731 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ +N ++ + G G+NL ++F W+ + R Sbjct: 732 DIRLFNQESSDYKVMLLSTRAGGLGINLTS-AQDVIFLDEDWNPQITL-----QAEARAH 785 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V +Y + Q T++E ++ R+R K + + +++ Sbjct: 786 RIGQTKKVTIYKICTQGTVEEQMMGRIRKKLYLSAKITESMR 827 >gi|119596384|gb|EAW75978.1| chromodomain helicase DNA binding protein 6, isoform CRA_e [Homo sapiens] Length = 2731 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 744 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 803 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 804 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 863 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 864 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 920 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 921 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 974 >gi|321479460|gb|EFX90416.1| hypothetical protein DAPPUDRAFT_232072 [Daphnia pulex] Length = 2083 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 66/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYY-------------DEEKH 47 K Y + L + + + + + N + E Sbjct: 1078 KYYKYVLTRNFEALNSRTGGQQVSLLNIMMDLKKCCNHPYLFPVASQEAPCLQNGMYETT 1137 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L ++ K +++ L L+ + + Sbjct: 1138 ALVKASGKLVLLSKMLRVLKEQGHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGT 1197 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N P + + G G+NL + +V + W+ + Sbjct: 1198 LRQDAIDRFNAPGAPQFVFLLSTRAGGLGINL-ATADTVVIYDSDWNP-----HNDIQAF 1251 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1252 SRAHRIGQANKVMIYRFVTRNSVEERVTQVAKKKMMLTHLVV 1293 >gi|281211051|gb|EFA85217.1| myb domain-containing protein [Polysphondylium pallidum PN500] Length = 1186 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 29/235 (12%), Positives = 78/235 (33%), Gaps = 42/235 (17%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS------------ASKTVKCLQLANGAVYY--- 42 +K Y QRE Y L ++ EA + + ++ + N + Sbjct: 420 IKLYVGLSAMQREWYKRLLSKDFEALHGVGVKGSSGRVKLLNICMQLRKACNHPYLFDGA 479 Query: 43 ----DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR----------LQK 86 + K+ L+ ++ K + +++ + L Sbjct: 480 EEQPYTTGDHLINNSGKMVLLDKLLGRLKQRGSRVLIFSQWARMLDILEDYLLYRDYSYC 539 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I+ +NE + + G G+ L ++++ F W+ + Sbjct: 540 RIDGSTDSQTRENYIESFNEPGSKHFVFILTTRAGGLGITL-NTADVVILFDSDWNPQ-- 596 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ R + G + V VY + +++++E ++++ K + +++ + Sbjct: 597 ---MDLQAQDRAHRIGQTKPVTVYRFVTESSMEEKMVEKAELKLQLDAVVIQQGR 648 >gi|254572850|ref|XP_002493534.1| Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes [Pichia pastoris GS115] gi|238033333|emb|CAY71355.1| Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes [Pichia pastoris GS115] Length = 983 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 78/225 (34%), Gaps = 31/225 (13%) Query: 1 MKQYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEK--------HWK 49 +K Y + + G+ + ++ + N ++ + Sbjct: 338 IKLYRNLLEKDIDAVNCGFGKREGKTRLLNIVMQLRKCCNHPYLFEGVEPGPPFTTDEHL 397 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ K + +++ + L L+ + Sbjct: 398 VYNSAKMIVLDKLLKKMKEQGSRVLIFSQMSRLLDILEDYCFFREYEYCRIDGSTAHEDR 457 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + + + R Sbjct: 458 INAIDEYNKPDSKKFIFLLTTRAGGLGINLTS-ADIVVLYDSDWNPQA-----DLQAMDR 511 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ V V+ + +N I+E VL+R K + L++ + Sbjct: 512 AHRIGQKKQVQVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRA 556 >gi|195062800|ref|XP_001996256.1| GH22391 [Drosophila grimshawi] gi|193899751|gb|EDV98617.1| GH22391 [Drosophila grimshawi] Length = 1659 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 57/144 (39%), Gaps = 17/144 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLF 113 KA +++ + L++ + + I + Sbjct: 1189 KAEGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADFQTRADIFVFL 1248 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++F+ W+ +++ + R + G + V VY LI + Sbjct: 1249 LSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHRLGQTKQVTVYRLICK 1302 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 TI+E +LQR R KS IQ ++++ Sbjct: 1303 GTIEERILQRAREKSEIQRMVISG 1326 >gi|145359958|ref|NP_178970.3| CHR5 (chromatin remodeling 5); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|330251136|gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana] Length = 1724 Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 72/229 (31%), Gaps = 34/229 (14%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + DL + + V+ + N ++ H Sbjct: 873 QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKLD 932 Query: 51 ---VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + K+ L+ ++ + +++ L L + + Sbjct: 933 KIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAE 992 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + +V F W+ + + + Sbjct: 993 LRQQAMDHFNAPASDDFCFLLSTRAGGLGINL-ATADTVVIFDSDWNPQN-----DLQAM 1046 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1047 SRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEG 1095 >gi|302693046|ref|XP_003036202.1| hypothetical protein SCHCODRAFT_50771 [Schizophyllum commune H4-8] gi|300109898|gb|EFJ01300.1| hypothetical protein SCHCODRAFT_50771 [Schizophyllum commune H4-8] Length = 1898 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 59/182 (32%), Gaps = 20/182 (10%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR---- 83 K + QL + E I A + +++ L Sbjct: 1648 KLLALKQLLTDCGIGVTASAAESGKSELIDAGPESAGAFSQHRVLIFCQMKQMLDIIESD 1707 Query: 84 ---------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 G K +Q +N + I L G GL L G + ++ Sbjct: 1708 LFKQHMPSVTYMRLDGGTDASKRHAIVQTFNSDPSIDCLLLTTHVGGLGLTLT-GADTVI 1766 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ M + + R + G K+ V VY LI + T++E ++ R K I + Sbjct: 1767 FVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITKGTLEEKIMGLQRFKLNIANS 1821 Query: 194 LL 195 ++ Sbjct: 1822 VV 1823 >gi|296220830|ref|XP_002756503.1| PREDICTED: lymphoid-specific helicase isoform 5 [Callithrix jacchus] Length = 739 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 66/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + ++ K L+ ++ + +++ Sbjct: 465 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVINSGKFLILDRMLPELKKRGHKVLLFSQ 524 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 525 MTSMLDILMDYCHLRNFNFSRLDGSMSYSERERNMHSFNTDPEVFIFLVSTRAGGLGINL 584 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 585 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 638 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 639 AKRKLEKLIIH 649 >gi|19421557|gb|AAK56405.1| chromodomain helicase DNA binding protein 5 [Homo sapiens] Length = 2713 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 707 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 766 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 767 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 826 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 827 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 883 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 884 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 937 >gi|48255898|ref|NP_620614.2| probable global transcription activator SNF2L2 isoform b [Homo sapiens] gi|55957478|emb|CAI14600.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Homo sapiens] gi|55958983|emb|CAI12968.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Homo sapiens] gi|119579217|gb|EAW58813.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, isoform CRA_c [Homo sapiens] gi|119579219|gb|EAW58815.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, isoform CRA_c [Homo sapiens] gi|162318924|gb|AAI56186.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [synthetic construct] gi|307686381|dbj|BAJ21121.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [synthetic construct] Length = 1572 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 977 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1036 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1037 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1096 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1097 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1152 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1153 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1201 >gi|195391896|ref|XP_002054595.1| GJ24541 [Drosophila virilis] gi|194152681|gb|EDW68115.1| GJ24541 [Drosophila virilis] Length = 1632 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 +K K+ L+ ++ KA +++ + L++ + Sbjct: 1156 SIVVPDKETLITDAGKLFVLDSLLTRLKAEGHRVLIYSQMTKMIDLLEEYMWHRKHRYMR 1215 Query: 96 ---------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I + + G G+NL + ++F+ W+ Sbjct: 1216 LDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT---- 1270 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1271 -VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 1320 >gi|193787140|dbj|BAG52346.1| unnamed protein product [Homo sapiens] Length = 979 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 474 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSNDGS 533 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 534 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 593 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 594 LRQEAIDRFNAPGAQQFCFLLSTRASGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 647 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 648 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 689 >gi|291404432|ref|XP_002718428.1| PREDICTED: BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa [Oryctolagus cuniculus] Length = 1858 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1538 VQLYEDFAKSRAKCDVDETVSSVTLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTS 1597 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1598 QHPEFKSTTEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGGTSESGTESVVAQHRIL 1657 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1658 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 1717 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1718 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1771 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1772 KIMGLQKFKMNIANTVIS 1789 >gi|114682033|ref|XP_001148096.1| PREDICTED: chromodomain helicase DNA binding protein 6 isoform 3 [Pan troglodytes] gi|114682035|ref|XP_001148168.1| PREDICTED: chromodomain helicase DNA binding protein 6 isoform 4 [Pan troglodytes] gi|114682037|ref|XP_001148245.1| PREDICTED: chromodomain helicase DNA binding protein 6 isoform 5 [Pan troglodytes] gi|114682039|ref|XP_001148310.1| PREDICTED: chromodomain helicase DNA binding protein 6 isoform 6 [Pan troglodytes] Length = 2713 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 707 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 766 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 767 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 826 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 827 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 883 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 884 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 937 >gi|73946647|ref|XP_860406.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 22 [Canis familiaris] Length = 1552 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 74/225 (32%), Gaps = 36/225 (16%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + K+ Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEKKKKKRKERG 1022 Query: 53 ------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 K + L+ I+ K A +++ S + ++ F Sbjct: 1023 AELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKS 1082 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++NE + + G GLNLQ + +V F W+ + + Sbjct: 1083 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQA 1136 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1181 >gi|302791647|ref|XP_002977590.1| hypothetical protein SELMODRAFT_450749 [Selaginella moellendorffii] gi|300154960|gb|EFJ21594.1| hypothetical protein SELMODRAFT_450749 [Selaginella moellendorffii] Length = 2094 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 67/168 (39%), Gaps = 11/168 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + LQ G + + K + +I + + F + Sbjct: 1106 RLLQFDCGKLQQL----SVLLRRLKSEGHRALIFTQMTKMLDILESFINLYGYNYMRLDG 1161 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ +Q +N KI L S G G+NL G + ++F+ W+ ++ Sbjct: 1162 STKPEQRQILMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPA-----MD 1215 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G R V +Y L++++TI+E +L++ K + +L++ + Sbjct: 1216 QQAQDRCHRIGQTREVHIYRLVSESTIEENILKKANQKRFLDNLVIQS 1263 >gi|301098711|ref|XP_002898448.1| SNF2 family helicase/ATPase and F-box protein, putative [Phytophthora infestans T30-4] gi|262105219|gb|EEY63271.1| SNF2 family helicase/ATPase and F-box protein, putative [Phytophthora infestans T30-4] Length = 2503 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 72/170 (42%), Gaps = 19/170 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP-QGRTLDK- 96 + +K + K++ L V++ K ++ +S L L+ G T + Sbjct: 1064 LFFPDKALVQFDCGKLQQLAVLLRTLKRGGHRCLIFTQMSSMLNILEAFLNLHGHTYFRL 1123 Query: 97 --------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ +N + KI S G G+NL G + ++F+ W+ Sbjct: 1124 DGATKVDKRQMLMERFNRDEKIFCFILSTRSGGLGINLT-GADAVIFYDSDWNPA----- 1177 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ R + G R V +Y L++++T++E +L++ + K + L+++ Sbjct: 1178 MDAQAQDRAHRIGQTRDVHIYRLVSEHTVEENILRKAQQKRHLDFLVMSE 1227 >gi|42407259|dbj|BAD10846.1| lymphoid specific helicase variant3 [Homo sapiens] gi|119570413|gb|EAW50028.1| helicase, lymphoid-specific, isoform CRA_c [Homo sapiens] Length = 806 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 532 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 591 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 592 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 651 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 652 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 705 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 706 AKRKLEKLIIH 716 >gi|68467321|ref|XP_722322.1| hypothetical protein CaO19.12471 [Candida albicans SC5314] gi|68467550|ref|XP_722208.1| hypothetical protein CaO19.5004 [Candida albicans SC5314] gi|46444164|gb|EAL03441.1| hypothetical protein CaO19.5004 [Candida albicans SC5314] gi|46444289|gb|EAL03565.1| hypothetical protein CaO19.12471 [Candida albicans SC5314] Length = 848 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 73/226 (32%), Gaps = 48/226 (21%) Query: 21 EAFNSASKTVKCLQLANGAVYYD--------------------------EEKHWKEVHDE 54 +L N D + + Sbjct: 546 TGSQPLKAIGMLKKLCNHPDLLDLPEDVEGSEEFIPDDYQSSIAGGSASRNREIQTWFSG 605 Query: 55 KIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K LE ++K N I++ ++ L ++K ++K + Sbjct: 606 KFLILERFLQKINKETDDKIVLISNYTQTLDLIEKMCRYKKYGVLRLDGTMNINKRQKLV 665 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++N+ P + + G G+NL G N LV W+ Q + R + Sbjct: 666 DKFNDPNGPEFIFLLSSKAGGCGINL-IGANRLVLMDPDWNPASDQ-----QALARVWRD 719 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G K+ F+Y I+ TI+E + QR K ++ +++ K++ + Sbjct: 720 GQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDE-KEDVERL 764 >gi|296214425|ref|XP_002753816.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1 [Callithrix jacchus] Length = 2583 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 1059 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 1118 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 1119 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1178 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1179 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1235 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1236 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1288 >gi|156544311|ref|XP_001607169.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 1587 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 69/232 (29%), Gaps = 43/232 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1009 LYKHMQSKGVLLTDGSEKGKRGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYSEHLGIQ 1068 Query: 53 -------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ------- 90 K + L+ I+ K +++ + ++ Sbjct: 1069 GVGLISGPDLYRASGKFELLDRILPKLKATGHRVLLFCQMTQLMTIMEDYLNWRGFRYLR 1128 Query: 91 ---GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + ++ +N+ + G GLNLQ + ++ F W+ + Sbjct: 1129 LDGTTKAEDRGDLLKRFNDPSSDYFLFILSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ-- 1185 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 1186 ---DLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1234 >gi|146324514|ref|XP_751168.2| dsDNA-dependent ATPase Rad54 [Aspergillus fumigatus Af293] gi|129557284|gb|EAL89130.2| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus Af293] Length = 807 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 509 LKAIGILKKLCNHPDLLDLTRDLPGCEHTFPEDYVPPEARGRDRDIKSWYSGKMMVLDRM 568 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K ++K + ++N Sbjct: 569 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNINKRQKLVDKFNNPDG 628 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 629 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 682 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 683 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 714 >gi|58260984|ref|XP_567902.1| helicase [Cryptococcus neoformans var. neoformans JEC21] gi|57229983|gb|AAW46385.1| helicase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 926 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 75/219 (34%), Gaps = 34/219 (15%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKA 58 RE +++ + ++ ++++ +D K+ Sbjct: 592 REWALKQATKHVNNMRLQNLVMQLRKISSHPYLFDWPSDPATGELVVDDNLVNASGKMLL 651 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWN 105 L +++ +++ F + L + + E+N Sbjct: 652 LNRLLDALFQKGHRVLLFSQFTTMLDVIEDWATVYKGWKVCRIDGSTPQESRREQMDEFN 711 Query: 106 EGK-----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 GK L + G G+NL + ++FF W+ + ++ R + G Sbjct: 712 GGKDDPNACKLFLLSTRAGGLGINLVS-ADTVIFFDQDWNPQ-----MDLQAQDRAHRIG 765 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V V+ L++ +TI+ +L + K ++ L+++ K Sbjct: 766 QTKPVLVFRLVSAHTIESKILAKAGNKRKLEALVISQGK 804 >gi|169763362|ref|XP_001727581.1| SNF2 family helicase/ATPase PasG [Aspergillus oryzae RIB40] gi|83770609|dbj|BAE60742.1| unnamed protein product [Aspergillus oryzae] Length = 868 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 81/219 (36%), Gaps = 26/219 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKA 58 + +R L + + + ++ N + + + V K+ Sbjct: 574 EEIERAKTFKLAKQEVAQKKMQNPVMQARLACNSPHNFYWPWNDEPVDESLITASGKMLL 633 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT------------LDKDPCTIQEW 104 L+ ++ + AN I++ F S L LQ Q R+ D+ Sbjct: 634 LDRLVTRLLANGHKILIFSQFKSQLDILQDWATQLRSWNCCRIDGAISQTDRRDQIKAFN 693 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+NL + ++ F W+ ++ + R + G R Sbjct: 694 TDPDYKIFLLSTRAGGQGINLMA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTRP 747 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 748 VIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFKSL 786 >gi|296220826|ref|XP_002756501.1| PREDICTED: lymphoid-specific helicase isoform 3 [Callithrix jacchus] Length = 805 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 66/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + ++ K L+ ++ + +++ Sbjct: 531 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVINSGKFLILDRMLPELKKRGHKVLLFSQ 590 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 591 MTSMLDILMDYCHLRNFNFSRLDGSMSYSERERNMHSFNTDPEVFIFLVSTRAGGLGINL 650 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 651 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 704 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 705 AKRKLEKLIIH 715 >gi|300793896|ref|NP_001178846.1| TATA-binding protein-associated factor 172 [Rattus norvegicus] gi|293344714|ref|XP_001080159.2| PREDICTED: BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae) [Rattus norvegicus] Length = 1855 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1535 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 1594 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1595 QHPEFKNTTEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGTSSESGTESVVAQHRIL 1654 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1655 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 1714 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1715 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1768 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1769 KIMGLQKFKMNIANTVIS 1786 >gi|213406579|ref|XP_002174061.1| helicase SWR1 [Schizosaccharomyces japonicus yFS275] gi|212002108|gb|EEB07768.1| helicase SWR1 [Schizosaccharomyces japonicus yFS275] Length = 1603 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 64/163 (39%), Gaps = 19/163 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDP 98 K+ L+ ++ + AN ++V + + +++ + + Sbjct: 1425 DSGKLSKLDKLLAELKANDHRVLVYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRD 1484 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + + G G+NL + +VF+ W+ I+ + R + Sbjct: 1485 MVSEWQTRPDLFVFLLSTRAGGLGINLTA-ADTVVFYDSDWNPS-----IDSQAMDRAHR 1538 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G ++ V VY I + TI+E ++ R + K +Q ++++ + Sbjct: 1539 IGQQKQVTVYRFITKGTIEERIVHRAKEKEEVQKVVISGGESR 1581 Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats. Identities = 7/71 (9%), Positives = 22/71 (30%), Gaps = 6/71 (8%) Query: 3 QYHKFQRE-LYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +R+ +L + + + + ++ ++ N ++ E + Sbjct: 1103 LYQALRRQISVTELLEKAKSGADDSVASIMNLVMQFRKVCNHPDLFEREDVHSPLSLASY 1162 Query: 57 KALEVIIEKAN 67 I + N Sbjct: 1163 SQSHFINREGN 1173 >gi|114631881|ref|XP_001151143.1| PREDICTED: helicase, lymphoid-specific isoform 8 [Pan troglodytes] Length = 806 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 532 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 591 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 592 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 651 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 652 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 705 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 706 AKRKLEKLIIH 716 >gi|114631895|ref|XP_001151399.1| PREDICTED: helicase, lymphoid-specific isoform 12 [Pan troglodytes] Length = 861 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 548 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 607 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 608 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 667 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 668 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 721 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 722 AKRKLEKLIIH 732 >gi|70997575|ref|XP_753531.1| nucleosome remodeling complex ATPase subunit (Snf2h) [Aspergillus fumigatus Af293] gi|66851167|gb|EAL91493.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Aspergillus fumigatus Af293] Length = 986 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 31/193 (16%) Query: 29 TVKCLQLANGAVYY-------DEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNS 79 ++ + + E K L+ +++ +IV +F+ Sbjct: 496 LMELRKCCIHPYLFADAIPSPYELGEHLIHQSGKFLVLKKLLQYYVTTETKVIVFSNFDQ 555 Query: 80 DLARLQKAFPQGRTLDK---------------DPCTIQ-EWNEGKIPLLFAHPASCGHGL 123 L + + ++ + N+ + + + G GL Sbjct: 556 CLNLCEDLVMMLQGSNRAFEYARLDGRTTGPWRKVMVHLFQNDPRYKVFLVSIRAGGEGL 615 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL +++VF W+ + + R R + G R V +Y L + T++E + +R Sbjct: 616 NLTS-SSVVVFLDEDWNPQ-----VMRQAEARVHRIGQTRPVVIYKLRSAGTVEEQMSRR 669 Query: 184 LRTKSTIQDLLLN 196 L K+ + D + Sbjct: 670 LVKKAYVADRVTE 682 >gi|332024911|gb|EGI65099.1| DNA repair and recombination protein RAD54-like protein [Acromyrmex echinatior] Length = 681 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 74/228 (32%), Gaps = 42/228 (18%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------------ 52 +R + + + + ++ + +L N ++ K Sbjct: 366 DSIKRSMEENDNPKKTGSLSALAAITLLKKLCNHPDLIYDKIKEKADGLEKAASLLPPNY 425 Query: 53 ---------DEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ---------- 90 K+ L+ ++ I++ ++ L +K + Sbjct: 426 SAKELMPELSGKLMVLDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCHKRSYNYVRLDG 485 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T+ K + +N + + G GLNL G N LV F W+ Sbjct: 486 TMTIKKRAKVVDNFNSDSSNDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN----- 539 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ FVY ++ TI+E + QR K + +++ Sbjct: 540 DDQAMARVWRDGQKKPCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVD 587 >gi|188996818|ref|YP_001931069.1| Non-specific serine/threonine protein kinase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931885|gb|ACD66515.1| Non-specific serine/threonine protein kinase [Sulfurihydrogenibium sp. YO3AOP1] Length = 559 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 83/221 (37%), Gaps = 34/221 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + + + N K Q+ N + +H K++ L+ Sbjct: 341 LNLYERIK----YEKNFNYMMKQNLIFSLQKLRQICNFP--------PESIHSPKVERLK 388 Query: 61 VIIEK--ANAAPIIVAYHFNSDL--------------ARLQKAFPQGRTLDKDPCTIQEW 104 I+++ +++ +F ++ ++ + +K+ + Sbjct: 389 EIVKELADQKEKVVIFTNFVNEGVDKIIKNIKTILQPQQIVSYHGSLKPDEKNLAVKKFV 448 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + K + + G GL L + ++FF L W+ + R + G K Sbjct: 449 EDEKCLVFVGTINAAGEGLTLTS-SSYVIFFDLHWNPAKMW-----QAEDRVHRIGQKNK 502 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V +Y I QNT++E ++Q+L K ++ + +++ + + V Sbjct: 503 VNIYTFITQNTVEEKIMQKLEEKRSMINNVIDDVSSDIESV 543 >gi|157870081|ref|XP_001683591.1| DNA repair and recombination protein RAD54 [Leishmania major strain Friedlin] gi|68126657|emb|CAJ04466.1| putative DNA repair and recombination protein RAD54 [Leishmania major strain Friedlin] Length = 1127 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 18/149 (12%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKI 109 + + +++ +F L + + K + +N Sbjct: 802 DELKGNGEHDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVPGS 861 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N L+ F W+ + + R + G K+ VF+ Sbjct: 862 QEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPAN-----DAQAMGRVWRDGQKKCVFI 915 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y L++ TI+E + QR +K + +++ Sbjct: 916 YRLLSTGTIEEKIYQRQVSKQGLSANVVD 944 >gi|297479287|ref|XP_002690695.1| PREDICTED: chromodomain helicase DNA binding protein 8 [Bos taurus] gi|296483394|gb|DAA25509.1| chromodomain helicase DNA binding protein 8 [Bos taurus] Length = 2540 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 1016 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 1075 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 1076 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1135 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1136 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1192 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1193 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1245 >gi|119391227|dbj|BAF41982.1| TBP-associated factor 170 [Mus musculus] Length = 1848 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1528 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 1587 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1588 QHPEFKSTTEKLTVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSSTESGTESVVAQHRIL 1647 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1648 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 1707 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1708 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1761 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1762 KIMGLQKFKMNIANTVIS 1779 >gi|123858774|ref|NP_001074175.1| TATA-binding protein-associated factor 172 [Mus musculus] Length = 1848 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1528 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 1587 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1588 QHPEFKSTTEKLTVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSSTESGTESVVAQHRIL 1647 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1648 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 1707 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1708 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1761 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1762 KIMGLQKFKMNIANTVIS 1779 >gi|83767454|dbj|BAE57593.1| unnamed protein product [Aspergillus oryzae] Length = 815 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 517 LKAIGLLKKLCNHPDLLNLSTDLPGCEFAFPEDYVPPEARGRDRDIKSWYSGKMMVLDRM 576 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K ++K + ++N Sbjct: 577 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDG 636 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 637 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 690 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 691 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 722 >gi|223985797|ref|ZP_03635840.1| hypothetical protein HOLDEFILI_03146 [Holdemania filiformis DSM 12042] gi|223962245|gb|EEF66714.1| hypothetical protein HOLDEFILI_03146 [Holdemania filiformis DSM 12042] Length = 1073 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 61/172 (35%), Gaps = 21/172 (12%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN 78 + + Q+ + + K+ A +IE + I+V F Sbjct: 873 SKIMILAMLTRLRQICCDPGLVFDGYGGE---RSKLTACMELIENAVESGKKILVFSQFT 929 Query: 79 SDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 + L +L+ + + ++ +N K P+ + G GLNL G Sbjct: 930 TILDKLRGECEKRGIGTYLLTGATPKQQRFDLMESFNRDKTPVFLISLKAGGTGLNLT-G 988 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 I++ + WW+L E R + G R V V LI + T++E + Sbjct: 989 AEIVIHYDPWWNLSA-----ENQATDRAYRIGQTRNVQVVKLIVEGTVEEKI 1035 >gi|29244924|ref|NP_115597.3| chromodomain-helicase-DNA-binding protein 6 [Homo sapiens] gi|296439466|sp|Q8TD26|CHD6_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 6; Short=CHD-6; AltName: Full=ATP-dependent helicase CHD6; AltName: Full=Radiation-induced gene B protein gi|56203260|emb|CAI22255.1| chromodomain helicase DNA binding protein 6 [Homo sapiens] gi|56203561|emb|CAI21744.1| chromodomain helicase DNA binding protein 6 [Homo sapiens] gi|57208321|emb|CAI42977.1| chromodomain helicase DNA binding protein 6 [Homo sapiens] gi|119596381|gb|EAW75975.1| chromodomain helicase DNA binding protein 6, isoform CRA_b [Homo sapiens] gi|225000154|gb|AAI72397.1| Chromodomain helicase DNA binding protein 6 [synthetic construct] Length = 2715 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 709 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 768 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 769 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 828 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 829 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 885 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 886 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 939 >gi|70982334|ref|XP_746695.1| SNF2 family helicase/ATPase (Swr1) [Aspergillus fumigatus Af293] gi|74666640|sp|Q4WAS9|SWR1_ASPFU RecName: Full=Helicase swr1 gi|66844319|gb|EAL84657.1| SNF2 family helicase/ATPase (Swr1), putative [Aspergillus fumigatus Af293] gi|159123062|gb|EDP48182.1| SNF2 family helicase/ATPase (Swr1), putative [Aspergillus fumigatus A1163] Length = 1695 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 70/179 (39%), Gaps = 11/179 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + K + D K +I + + F + Sbjct: 1362 RLSIAFPDKRLLQYDCGKLQRLD----KLLRDLKAGGHRALIFTQMTKMLDILEQFLNIH 1417 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N + +I + S G G+NL G + ++F+ L W+ Sbjct: 1418 GHRYLRLDGTTKVEQRQILTDRFNNDDRILVFILSSRSGGLGINLT-GADTVIFYDLDWN 1476 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y ++++TI+ +L++ K + D+++ + Sbjct: 1477 PA-----MDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILRKANQKRMLDDVVIQEGE 1530 >gi|296200471|ref|XP_002806815.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 6-like [Callithrix jacchus] Length = 2692 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 687 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 746 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 747 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 806 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 807 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 863 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 864 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 917 >gi|296411575|ref|XP_002835506.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629290|emb|CAZ79663.1| unnamed protein product [Tuber melanosporum] Length = 812 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N E K W + + Sbjct: 518 LKAIGLLKKLCNHPDLLNLSEDLPGCESLYPDDYVPKDARGRDREVKVWYSGKMMVLDRM 577 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I++ I++ ++ L +K K + ++N+ Sbjct: 578 LARIQRETKDKIVLISNYTQTLDVFEKLCRSRGYGALRLDGTMNGSKRTKLVAKFNDPDS 637 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 638 EEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 691 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ +++ ++ Sbjct: 692 YRFIATGTIEEKIFQRQSHKQSLSTSVVDGVE 723 >gi|255720466|ref|XP_002556513.1| KLTH0H15158p [Lachancea thermotolerans] gi|238942479|emb|CAR30651.1| KLTH0H15158p [Lachancea thermotolerans] Length = 1021 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 81/224 (36%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 Q + Y L ++++A N + ++ + N + Sbjct: 368 DMQVQWYKSLLEKDLDAVNGAIGKREGNTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 427 Query: 47 HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ +++K + +++ + L L+ + Sbjct: 428 EHLIFNAGKMIVLDKLLKKKREAGSRVLIFSQMSRLLDILEDYCFFREYSYCRIDGSTSH 487 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I ++NE + + G G+NL + +V + W+ + + Sbjct: 488 EERIDAIDQFNEPNSDKFIFLLTTRAGGLGINLVT-ADTVVLYDSDWNPQA-----DLQA 541 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V+VY + +N I+E V++R K + L++ Sbjct: 542 MDRAHRIGQKKQVYVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 585 >gi|296814920|ref|XP_002847797.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS 113480] gi|238840822|gb|EEQ30484.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS 113480] Length = 819 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 64/212 (30%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N E K W + + Sbjct: 521 LKAIGILKKLCNHPDLLKLSEDLPGCEKYFPEDMASSNGRRGDREVKSWYSGKMMVLDRM 580 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L ++ + K + +N+ Sbjct: 581 LARIRQDTNDKIVLISNYTQTLDLFERLCRSRGYGCIRLDGTMGVKKRSKLVDRFNDPNG 640 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G + FV Sbjct: 641 EEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPAADQ-----QALARVWRDGQSKDCFV 694 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA TI+E + QR K ++ ++++ + Sbjct: 695 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 726 >gi|330925332|ref|XP_003301007.1| hypothetical protein PTT_12406 [Pyrenophora teres f. teres 0-1] gi|311324570|gb|EFQ90879.1| hypothetical protein PTT_12406 [Pyrenophora teres f. teres 0-1] Length = 1935 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 57/150 (38%), Gaps = 20/150 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCTIQEWN-E 106 + E + +V L +Q G K + ++N + Sbjct: 1700 DLPEAVSQHRALVFCQMKEMLDMVQHNVLEKLLPSVQFMRLDGGVEATKRQEIVNKFNTD 1759 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL G + ++F W+ ++ + + R + G K+ V Sbjct: 1760 PSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVN 1813 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY ++ + T++E +L R K I ++N Sbjct: 1814 VYRIVTRGTLEEKILNLQRFKIDIASTVVN 1843 >gi|225436245|ref|XP_002275285.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 2052 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 81/270 (30%), Gaps = 74/270 (27%) Query: 1 MKQYHKF----QRELYCDLQGENIEA-------------FNSASKTVKCLQLANGAVYY- 42 +K Y +F R + N + L+L + Sbjct: 1713 LKLYEQFSGSHVRHEISSIVKRNESTDTGEGNSASPKASSHVFQALQYLLKLCGHPLLVV 1772 Query: 43 ---------------------DEEKHWKEVHDEKIKALEVIIEKA--------------- 66 + K H K+ AL I+E+ Sbjct: 1773 GEKIPDSLTTILSEFFPGTSDIMSELHKLHHSPKLIALHEILEECGIGVDASSSEGAVSV 1832 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRT-------------LDKDPCTIQEWN-EGKIPLL 112 +++ + L +++ +K ++ +N + I +L Sbjct: 1833 GQHRVLIFAQHKAFLDIIERDLFHTHMKSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVL 1892 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G GLNL + LVF W+ + + R + G ++ V V+ LI Sbjct: 1893 LLTTHVGGLGLNLTS-ADTLVFMEHDWNPMR-----DHQAMDRAHRLGQRKVVNVHRLIM 1946 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + T++E V+ R K ++ + ++N+ Sbjct: 1947 RGTLEEKVMSLQRFKLSVANSVINSENASM 1976 >gi|73946631|ref|XP_860127.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 14 [Canis familiaris] Length = 1554 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 73/227 (32%), Gaps = 38/227 (16%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + + Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEVRMDPKRSSE 1022 Query: 53 --------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GR 92 K + L+ I+ K A +++ S + ++ F Sbjct: 1023 EWLLLYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTT 1082 Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++++NE + + G GLNLQ + +V F W+ + + Sbjct: 1083 KSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DL 1136 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 QAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1183 >gi|328716042|ref|XP_003245819.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog [Acyrthosiphon pisum] Length = 2002 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 K Y + L + + + + + N + Sbjct: 982 KYYKYILTRNFEALNPRGGGQQVSLLNIMMDLKKCCNHPYLFPAAAQEAPTAINGSYEIG 1041 Query: 52 ------HDEKIKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLD 95 + + + I +++ L + T + Sbjct: 1042 GLTRAAGKLVLLSKMLRILHDTNHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGSITGN 1101 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I +N + + G G+NL + ++ + W+ + Sbjct: 1102 QRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1155 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1156 SRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1197 >gi|330803641|ref|XP_003289812.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum] gi|325080071|gb|EGC33642.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum] Length = 731 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 78/225 (34%), Gaps = 37/225 (16%) Query: 3 QYHK-FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK------------ 49 Y L +S S +L N + + Sbjct: 314 LYKSVLNSNSVQSLINGKESPASSLSTITLLKKLCNSPSLLQDTSDQELQSIFKQYSYNM 373 Query: 50 ---EVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 E K+ +E +I++ +++ ++ L ++ + + Sbjct: 374 ESMENEAGKLLFVESLIKQLKSVGEKLVLVSNYTQTLDVFERLCKKLSTDFLRLDGSVSS 433 Query: 95 DKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D + ++N+ K + + G G+NL GGN LV + W+ I+ Sbjct: 434 DTRQSLVDKFNDQSNKKYQIFLLSAKAGGVGINL-IGGNHLVLYDPDWNPA-----IDIQ 487 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + VF+Y L + TI+E + QR K +I + +++ Sbjct: 488 AMERVWREGQNKPVFIYRLFSTGTIEEKIYQRQLMKESISNSIVD 532 >gi|307172263|gb|EFN63768.1| Chromodomain-helicase-DNA-binding protein 7 [Camponotus floridanus] Length = 4304 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 72/233 (30%), Gaps = 41/233 (17%) Query: 2 KQYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + L A N + ++ + + + ++ Sbjct: 1928 KYYRGILERNFSFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNGAEDQIQLDYKTGEKE 1987 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K+ ++ ++ K A+ +++ L L+ + + Sbjct: 1988 DSEAYYHALVNSSGKMVLIDKLLPKLKASGHRVLIFSQMVKCLDLLEDYLLYKKYPYERI 2047 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ + W+ + Sbjct: 2048 DGRIRGNLRQAAIDRYSKPDSDRFVFLLCTKAGGLGINLTA-ADTVIIYDSDWNPQN--- 2103 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++ V VY L+ +NT + + + K + +L ++ Sbjct: 2104 --DLQAQARCHRIGQQKMVKVYRLLCRNTYEREMFDKASLKLGLDKAILQSMN 2154 >gi|296189845|ref|XP_002806533.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription activator SNF2L2-like [Callithrix jacchus] Length = 1589 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 976 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1035 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1036 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1095 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1096 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1151 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1152 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1200 >gi|241949239|ref|XP_002417342.1| chromatin remodelling complex ATPase chain ISW1, pseudogene, putative [Candida dubliniensis CD36] gi|223640680|emb|CAX44987.1| chromatin remodelling complex ATPase chain ISW1, pseudogene, putative [Candida dubliniensis CD36] Length = 1017 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 78/226 (34%), Gaps = 39/226 (17%) Query: 7 FQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEKH 47 Q+ LY + ++I+A N + ++ + N + Sbjct: 374 MQKNLYQKILEKDIDAVNGANGKKESKTRLLNIVMQLRKCCNHPYLFEGVEPGPPYTTDE 433 Query: 48 WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LD 95 + +K+ L+ ++ + + +++ + L L+ Sbjct: 434 HLVFNSQKMLILDQLLKKFQQEGSRVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTEHS 493 Query: 96 KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I E+N+ + + G G+NL +I++ F W+ + + + Sbjct: 494 DRINAIDEYNKPGSEKFIFLLTTRAGGLGINLTS-ADIVILFDSDWNPQA-----DLQAM 547 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V V+ I + I+E VL+R K + L++ + Sbjct: 548 DRAHRIGQTKQVKVFRFITERAIEEKVLERAAQKLRLDQLVIQQGR 593 >gi|222630170|gb|EEE62302.1| hypothetical protein OsJ_17090 [Oryza sativa Japonica Group] Length = 1087 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 72/213 (33%), Gaps = 26/213 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----HDEKIKA 58 Y + L + +++ + N + E + + K + Sbjct: 652 YEQVTSNGRVSLGSGLKSKA-LQNLSMQLRKCCNHPYLFVEHYNMYQRQEIVRSSGKFEL 710 Query: 59 LEVIIEKAN--AAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWN- 105 L+ ++ K +++ ++ + ++N Sbjct: 711 LDRLLPKLQRAGHRVLLFSQMTKLLDILEVYLQMYQFKYMRLDGSTKTEERGRLLADFNK 770 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + L + G GLNLQ + ++ F W+ + +++ R + G K Sbjct: 771 KDSEYFLFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQKNE 824 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +I+E +L R + K I ++ A Sbjct: 825 VRVFVLVSVGSIEEEILDRAKQKMGIDAKVIQA 857 >gi|42407269|dbj|BAD10851.1| lymphoid specific helicase variant8 [Homo sapiens] gi|119570412|gb|EAW50027.1| helicase, lymphoid-specific, isoform CRA_b [Homo sapiens] Length = 884 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 610 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 669 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 670 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 729 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 730 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 783 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 784 AKRKLEKLIIH 794 >gi|50549971|ref|XP_502458.1| YALI0D05775p [Yarrowia lipolytica] gi|49648326|emb|CAG80646.1| YALI0D05775p [Yarrowia lipolytica] Length = 990 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 80/227 (35%), Gaps = 39/227 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 Q + Y L ++I+A N + ++ + N + Sbjct: 336 DMQVQWYQKLLEKDIDAVNGQLGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 395 Query: 47 HWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ +++ K+ + +++ + L L+ Sbjct: 396 EHLVFNCGKMVMLDKLLKRLKSQGSRVLIFSQMSRMLDILEDYCSFRDYEYSRIDGSTAH 455 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N + + G G+NL +I++ + W+ + + Sbjct: 456 EDRIAAIDEYNAEGSEKFVFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQA 509 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G + V+V+ + +N ++E VL+R K + L++ + Sbjct: 510 MDRAHRIGQTKQVYVFRFVTENAVEEKVLERAAQKLRLDQLVIQQGR 556 >gi|302786826|ref|XP_002975184.1| hypothetical protein SELMODRAFT_450747 [Selaginella moellendorffii] gi|300157343|gb|EFJ23969.1| hypothetical protein SELMODRAFT_450747 [Selaginella moellendorffii] Length = 2063 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 67/168 (39%), Gaps = 11/168 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + LQ G + + K + +I + + F + Sbjct: 1079 RLLQFDCGKLQQL----SVLLRRLKSEGHRALIFTQMTKMLDILESFINLYGYNYMRLDG 1134 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ +Q +N KI L S G G+NL G + ++F+ W+ ++ Sbjct: 1135 STKPEQRQILMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPA-----MD 1188 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G R V +Y L++++TI+E +L++ K + +L++ + Sbjct: 1189 QQAQDRCHRIGQTREVHIYRLVSESTIEENILKKANQKRFLDNLVIQS 1236 >gi|225441419|ref|XP_002275336.1| PREDICTED: similar to PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase [Vitis vinifera] Length = 2049 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 68/168 (40%), Gaps = 11/168 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +Q G + + + K + +I + V F + Sbjct: 1041 RLIQFDCGKLQ----ELAVLLRKLKSEGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDG 1096 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ +Q +N KI + S G G+NL G + ++F+ W+ ++ Sbjct: 1097 STQPEERQTLMQRFNTNPKIFIFILSTRSGGVGINL-VGADTVIFYDSDWNPA-----MD 1150 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G R V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 1151 QQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1198 >gi|114631875|ref|XP_001151210.1| PREDICTED: helicase, lymphoid-specific isoform 9 [Pan troglodytes] Length = 884 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 610 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 669 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 670 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 729 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 730 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 783 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 784 AKRKLEKLIIH 794 >gi|313221625|emb|CBY36111.1| unnamed protein product [Oikopleura dioica] Length = 1267 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 64/210 (30%), Gaps = 25/210 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HDE 54 +K Y+ F D++ + + + ++ + Sbjct: 354 LKIYNDFLSS--EDVRNALMTRASPLVQCTVLKKICDHPRRMANNAIKDIDLDLLLSESG 411 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQE 103 K++ L +++ I++ L + + + +D + Sbjct: 412 KMQVLADLVDAIIPEKILIFSQSIKILDIIAKILDDKTVNFIRMDGKDKLPIRDEKVKRF 471 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 ++ +I + GL L ++ + W+ + V R + G R Sbjct: 472 QSDKRIKVFMLTTGVGAVGLTLTA-ATRVIVYDPDWNPGR-----DDQAVDRAYRIGQTR 525 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 V V+ LI TI+E + R K +I Sbjct: 526 PVVVFRLITCETIEEKIYSRQLFKKSIISQ 555 >gi|311248656|ref|XP_003123249.1| PREDICTED: LOW QUALITY PROTEIN: transcription activator BRG1 [Sus scrofa] Length = 1475 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|296090211|emb|CBI40030.3| unnamed protein product [Vitis vinifera] Length = 1884 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 81/270 (30%), Gaps = 74/270 (27%) Query: 1 MKQYHKF----QRELYCDLQGENIEA-------------FNSASKTVKCLQLANGAVYY- 42 +K Y +F R + N + L+L + Sbjct: 1545 LKLYEQFSGSHVRHEISSIVKRNESTDTGEGNSASPKASSHVFQALQYLLKLCGHPLLVV 1604 Query: 43 ---------------------DEEKHWKEVHDEKIKALEVIIEKA--------------- 66 + K H K+ AL I+E+ Sbjct: 1605 GEKIPDSLTTILSEFFPGTSDIMSELHKLHHSPKLIALHEILEECGIGVDASSSEGAVSV 1664 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRT-------------LDKDPCTIQEWN-EGKIPLL 112 +++ + L +++ +K ++ +N + I +L Sbjct: 1665 GQHRVLIFAQHKAFLDIIERDLFHTHMKSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVL 1724 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G GLNL + LVF W+ + + R + G ++ V V+ LI Sbjct: 1725 LLTTHVGGLGLNLTS-ADTLVFMEHDWNPMR-----DHQAMDRAHRLGQRKVVNVHRLIM 1778 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + T++E V+ R K ++ + ++N+ Sbjct: 1779 RGTLEEKVMSLQRFKLSVANSVINSENASM 1808 >gi|156538236|ref|XP_001602268.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 1536 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCT 100 K+ L+ ++ K +++ + L++ + D+ Sbjct: 1058 GKLSVLDNLLRRLKEQGHRVLIYSQMTKMIDLLEEYMYHRKHTFMRLDGSSKISDRRDMV 1117 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + + G G+NL + ++F+ W+ +++ + R + G Sbjct: 1118 ADFQKRADIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHRLG 1171 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1172 QTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 1208 >gi|328722605|ref|XP_001946846.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Acyrthosiphon pisum] Length = 1670 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 26/220 (11%), Positives = 74/220 (33%), Gaps = 36/220 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 K Y+ ++ G + + ++ + N A+ +++ Sbjct: 646 KNYNALRK-------GSKGSSTTFLNIMIELKKCCNHALLTKPQENENTADDNLQGLLRG 698 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K+ L+ ++ + +++ L L + + Sbjct: 699 SGKLMLLDKLLVRLRETGHRVLIFSQMVRMLDILAEYLSYRHLPFQRLDGSIKGDIRRQA 758 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N + G G+NL + ++ F W+ + + R + Sbjct: 759 LEHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQARAHR 812 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G K V +Y L+ + +++E +++R + K + L++ + Sbjct: 813 IGQKNQVNIYRLVTKGSVEEDIVERAKQKMVLDHLVIQRM 852 >gi|307203835|gb|EFN82771.1| DNA repair and recombination protein RAD54-like [Harpegnathos saltator] Length = 679 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 73/228 (32%), Gaps = 42/228 (18%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE------------------- 45 ++ + + + ++ + +L N ++ Sbjct: 364 DSIKKSMEDSDNSKKGGSLSALAAITLLKKLCNHPDLIYDKIKERSDGFENAARLLPANY 423 Query: 46 --KHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ---------- 90 K K+ L+ ++ I++ ++ L +K + Sbjct: 424 STKELLPDLSGKLMVLDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCHKRGYNYVRLDG 483 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T+ K + +N + + G GLNL G N LV F W+ Sbjct: 484 TMTIKKRSKVVDNFNSESSSDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN----- 537 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ FVY ++ TI+E + QR K + +++ Sbjct: 538 DDQAMARVWRDGQKKPCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVD 585 >gi|301761430|ref|XP_002916137.1| PREDICTED: lymphoid-specific helicase-like [Ailuropoda melanoleuca] Length = 837 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 23/191 (12%), Positives = 62/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K + ++ + +++ Sbjct: 563 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLIFDTMLPELKARGHKVLLFSQ 622 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + + +N + + + + G G+NL Sbjct: 623 MTRMLDILLDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINL 682 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 683 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 736 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 737 AKRKLEKLIIH 747 >gi|17539642|ref|NP_502082.1| Phasmid Socket Absent family member (psa-4) [Caenorhabditis elegans] gi|10312098|gb|AAG16655.1|AF230280_1 SWI2/SNF2-like protein [Caenorhabditis elegans] gi|3875463|emb|CAA92768.1| C. elegans protein F01G4.1, confirmed by transcript evidence [Caenorhabditis elegans] gi|3879468|emb|CAA92978.1| C. elegans protein F01G4.1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 1474 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 76/225 (33%), Gaps = 35/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------- 53 Y Q+ L D + A + + V +L N + + + Sbjct: 786 IYRHMQKGLLLD-AKMSSGARSLMNTVVHLRKLCNHPFLFPNIEDSCRAYWKVNEVNGTD 844 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ I+ K I++ + S + + D+ Sbjct: 845 LMRVAGKLELLDRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDE 904 Query: 97 DPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++N L + G GLNLQ + ++ F W+ + Sbjct: 905 RGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQD 958 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 959 RAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGK 1003 >gi|313217104|emb|CBY38281.1| unnamed protein product [Oikopleura dioica] Length = 1430 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 26/230 (11%), Positives = 63/230 (27%), Gaps = 39/230 (16%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + L + + ++ + N + Sbjct: 681 KYYRAILERNFDFLSKGASTGNVPSLMNTMMELRKCCNHPFLIKGAEDKIIDEYRAKGEV 740 Query: 53 ----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD--- 97 K+ + ++ K +++ L L+ Q + Sbjct: 741 ADPLTSIVQASGKMVLIHKLLPKLKAGGHKVLIFSQMIRVLDILEDYLYQMSMGFERLDG 800 Query: 98 -------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I + + + + G G+NL + ++ F W+ + Sbjct: 801 RIRGNDRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN----- 854 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + R + G K+ V +Y L+ T + + R K + +L ++ Sbjct: 855 DLQAQARCHRIGQKKEVKIYRLLTSKTYEREMFDRASLKLGLDRAVLQSM 904 >gi|198466497|ref|XP_002135204.1| GA23929 [Drosophila pseudoobscura pseudoobscura] gi|198150627|gb|EDY73831.1| GA23929 [Drosophila pseudoobscura pseudoobscura] Length = 2036 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 73/226 (32%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS---------KTVKCLQLANGAVYYDEE--------KHW 48 Q++ Y + +N EA NS + + + N + Sbjct: 988 AMQKKFYKFILTKNYEALNSKTGGGSCSLINIMMDLKKCCNHPYLFPSAAEEAQTAAGGL 1047 Query: 49 KEVHD-----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 E++ K+ L ++ + + +++ L L+ + + Sbjct: 1048 YEINSLTKAAGKLVLLSKMLRQLKSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGG 1107 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + + G G+NL + ++ + W+ + Sbjct: 1108 ITGTVRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1161 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1162 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1207 >gi|156087380|ref|XP_001611097.1| snf2-related chromatin remodeling factor SRCAP [Babesia bovis T2Bo] gi|154798350|gb|EDO07529.1| snf2-related chromatin remodeling factor SRCAP [Babesia bovis] Length = 1675 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 17/143 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DPCTIQEWN-EGKIPLLF 113 K ++ F+ L L+ G T + + +N KI L Sbjct: 1373 KNEGHRCLLYTQFSKMLDILENWINLMGFTYIRLDGSTKVDMRQRIVTRFNENQKIFLFI 1432 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + + G GL L G + ++F+ W+ ++R + R + G R V VY LI++ Sbjct: 1433 SSTRAGGVGLTLT-GADTVIFYDTDWNPA-----MDRQAMDRCHRIGQTREVNVYRLISE 1486 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +T++E + ++ K + D++++ Sbjct: 1487 HTVEENIWRKQLQKRRLDDIVVD 1509 >gi|322817843|gb|EFZ25436.1| helicase-like protein, putative [Trypanosoma cruzi] Length = 929 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 74/235 (31%), Gaps = 49/235 (20%) Query: 6 KFQRELY-----CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 + QR+L L G+ A + + + Sbjct: 444 RLQRQLLFRMTEQALNGDKANATRLQAHFTHQRIVCCHPLALRILGVEVRASAQAGWEER 503 Query: 52 ---------------HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF------ 88 K+ L+ ++ + N ++ +F S L LQ Sbjct: 504 LASAGIELDEASIIAPSAKMIELDRMLREFKANGHRCLIFSNFTSILDLLQALCVLRGYG 563 Query: 89 ----PQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + ++ +N + + G G+ L G + ++ F ++ + Sbjct: 564 FERIDGSTSRVERELSMIRFNAPGSACFVFLLTTTAGGVGVTLT-GADTVILFDAHYNPQ 622 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+R R + G R V VY L +NTI+E + K+++ D +++ Sbjct: 623 -----IDRQAADRAHRIGQTRVVRVYRLCLKNTIEERIHNVALRKASLGDFIVDG 672 >gi|24656962|ref|NP_726065.1| domino, isoform D [Drosophila melanogaster] gi|21645213|gb|AAM70870.1| domino, isoform D [Drosophila melanogaster] Length = 3183 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 67/179 (37%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 + + + + K++ ++ ++ + N +++ L L+ Sbjct: 1636 LHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLN 1695 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ +N + +I S G G+NL G + ++F+ Sbjct: 1696 YHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSD 1754 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1755 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 1808 >gi|328354642|emb|CCA41039.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Pichia pastoris CBS 7435] Length = 1012 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 78/225 (34%), Gaps = 31/225 (13%) Query: 1 MKQYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEK--------HWK 49 +K Y + + G+ + ++ + N ++ + Sbjct: 367 IKLYRNLLEKDIDAVNCGFGKREGKTRLLNIVMQLRKCCNHPYLFEGVEPGPPFTTDEHL 426 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + K+ L+ ++ K + +++ + L L+ + Sbjct: 427 VYNSAKMIVLDKLLKKMKEQGSRVLIFSQMSRLLDILEDYCFFREYEYCRIDGSTAHEDR 486 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+N+ + + G G+NL +I+V + W+ + + + R Sbjct: 487 INAIDEYNKPDSKKFIFLLTTRAGGLGINLTS-ADIVVLYDSDWNPQA-----DLQAMDR 540 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ V V+ + +N I+E VL+R K + L++ + Sbjct: 541 AHRIGQKKQVQVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRA 585 >gi|209882325|ref|XP_002142599.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209558205|gb|EEA08250.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1866 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 70/225 (31%), Gaps = 34/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEK-------------HW 48 Y Y +L S ++ ++ N + H Sbjct: 799 LYKSILTRNYEELSKTTGGTKTSLQNICMELKKVCNHPFLIHRPEVDSSQGITPATIQHQ 858 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K +++ L + + + Sbjct: 859 LIYGCGKLCLLDKLLSRLKEKGNRVLIFSQMVRMLNIISEFLILRGFRHQRLDGTMGKEL 918 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + ++ + W+ + + Sbjct: 919 RKKAMDHFNSPNSDDFCFLLSTKAGGLGINLTT-ADTVIIYDSDWNPQN-----DLQAEA 972 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V +Y L+ +++I+E +L+R +TK + L++ L Sbjct: 973 RAHRIGQTKQVQIYRLVTKDSIEENILERAKTKMVLDTLVVQGLN 1017 >gi|146413212|ref|XP_001482577.1| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC 6260] Length = 814 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 66/215 (30%), Gaps = 42/215 (19%) Query: 26 ASKTVKCLQLANGAVY-----------------------YDEEKHWKEVHDEKIKALEVI 62 +L E + W ++ Sbjct: 524 LKAIGMLKKLCTHPELLRLPEEVLGSEDILPDDYESSGRDKEIRTWYSGKFAMLERFLHQ 583 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP-- 110 I I++ ++ L +++ ++K + +N+ + Sbjct: 584 IRTETDDKIVLISNYTQTLDLIERMCRYKRYQCCRLDGTMNINKRQKLVDRFNDPEGQEF 643 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL G N L+ W+ Q + R + G K+ F+Y Sbjct: 644 IFLLSSKAGGCGINL-IGANRLILLDPDWNPAADQ-----QALARVWRDGQKKDCFIYRF 697 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I TI+E + QR K ++ +++ K++ + Sbjct: 698 ILTGTIEEKIFQRQSMKLSLSSCVVDE-KEDVDRL 731 >gi|327308794|ref|XP_003239088.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS 118892] gi|326459344|gb|EGD84797.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS 118892] Length = 808 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 18/177 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---- 90 ++NG E K W + + I + I++ ++ L ++ Sbjct: 545 VSNGRRGDREAKTWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYG 604 Query: 91 ------GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + K + ++N+ + + G G+NL G N LV F W+ Sbjct: 605 CIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPA 663 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q + R + G + FVY IA TI+E + QR K ++ ++++ + Sbjct: 664 ADQ-----QALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVIDSAE 715 >gi|312381365|gb|EFR27128.1| hypothetical protein AND_06360 [Anopheles darlingi] Length = 2541 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 71/185 (38%), Gaps = 11/185 (5%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 L I A ++ + +Q G + + + K V+I + V Sbjct: 1582 KLLHPIISAMSTQFPDPRLIQYDCGKLQTLDR----LLKKLKSGGHRVLIFTQMTRMLDV 1637 Query: 74 AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNIL 132 F + + +++ ++ +N + + + S G G+NL G + + Sbjct: 1638 LEAFLNFHGHIYLRLDGTTKVEQRQVLMERFNNDRRMFVFILSTRSGGVGINLT-GADTV 1696 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 +F+ W+ ++ R + G R V +Y L+++ TI+E +L++ K + D Sbjct: 1697 IFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTIEENILKKANQKRILGD 1751 Query: 193 LLLNA 197 L + Sbjct: 1752 LAIEG 1756 >gi|301623501|ref|XP_002941055.1| PREDICTED: probable global transcription activator SNF2L2 [Xenopus (Silurana) tropicalis] Length = 1559 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 964 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPFIFQHIEESFAEHLGFT 1023 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1024 HRIIQVPDLYRTSGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1083 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE P + + G GLNLQ + +V F W+ + Sbjct: 1084 DGTTKSEDRASLLKRFNEEGSPFFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1139 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1140 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1188 >gi|157821521|ref|NP_001101267.1| chromodomain-helicase-DNA-binding protein 6 [Rattus norvegicus] gi|149043033|gb|EDL96607.1| chromodomain helicase DNA binding protein 6 (predicted) [Rattus norvegicus] Length = 2698 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 70/237 (29%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + + L N + ++ + N + + Sbjct: 708 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSS 767 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 768 EASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 827 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 828 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 884 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 885 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKG 938 >gi|17562600|ref|NP_504523.1| LEThal family member (let-418) [Caenorhabditis elegans] gi|3294508|gb|AAC25894.1| Lethal protein 418, confirmed by transcript evidence [Caenorhabditis elegans] gi|11095333|gb|AAG29838.1| LET-418 [Caenorhabditis elegans] Length = 1829 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 25/224 (11%), Positives = 65/224 (29%), Gaps = 34/224 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEKH 47 K Y + L + + ++ + N + E Sbjct: 860 KWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGT 919 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + K L+ ++ K +++ L ++ + Sbjct: 920 ALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQ 979 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + + G G+NL + ++ + W+ + Sbjct: 980 MRQDAIDRYNAPGAQQFIFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1033 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K V +Y + + +++E + + K + L++ A Sbjct: 1034 SRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRA 1077 >gi|242774780|ref|XP_002478510.1| SNF2 family helicase/ATPase PasG, putative [Talaromyces stipitatus ATCC 10500] gi|218722129|gb|EED21547.1| SNF2 family helicase/ATPase PasG, putative [Talaromyces stipitatus ATCC 10500] Length = 895 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 78/221 (35%), Gaps = 28/221 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------KHWKEVHDEKI 56 + +R L + I + + ++ N + K+ Sbjct: 596 EEIERAKTIKLAKKEIGSKKLQNPVMQARLACNSPHNFYWPWGDDSSTVDETLVTASGKM 655 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE 103 L+ ++ I++ F + L +Q Q G + I+ Sbjct: 656 LLLDRLVPCLMQKGHKILIFSQFKTQLDLIQDWATQLRGWNCCRIDGGVSQIDRRAQIKA 715 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + G G+NL + ++ F W+ ++ + R + G Sbjct: 716 FNTDKNFKIFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQT 769 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 770 RPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFKSL 810 >gi|297738311|emb|CBI27512.3| unnamed protein product [Vitis vinifera] Length = 728 Score = 94.8 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K + L ++ K +++ + S L L+ + Sbjct: 552 SAKCRELAELLPTLKQGGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTI 611 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N I + G GLNL G + +V + ++ + I+R R + Sbjct: 612 VDTFNNDTSIFACLLSTRAGGQGLNLT-GADTVVIHDMDFNPQ-----IDRQAEDRCHRI 665 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V +Y L+ ++T+DE V + + K + +L + Sbjct: 666 GQTKPVTIYRLVTKDTVDENVYEIAKRKLILDAAVLES 703 >gi|119472846|ref|XP_001258430.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL 181] gi|119406582|gb|EAW16533.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL 181] Length = 835 Score = 94.8 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 537 LKAIGILKKLCNHPDLLDLTRDLPGCEHTFPEDYVPPEARGRDRDIKSWYSGKMMVLDRM 596 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K ++K + ++N Sbjct: 597 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNINKRQKLVDKFNNPDG 656 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 657 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 710 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 711 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 742 >gi|302656074|ref|XP_003019794.1| hypothetical protein TRV_06171 [Trichophyton verrucosum HKI 0517] gi|291183564|gb|EFE39170.1| hypothetical protein TRV_06171 [Trichophyton verrucosum HKI 0517] Length = 881 Score = 94.8 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 75/208 (36%), Gaps = 27/208 (12%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEE-------KHWKEVHDEKIKALEVIIEK--AN 67 + I + + ++ + N + + K+ L+ ++ + Sbjct: 593 EKEISSKKLQNPVMQARLVCNSPLNFYWPWGEDSRVDSTLITSSGKMLLLDRLVPCLISK 652 Query: 68 AAPIIVAYHFN------SDLARLQKAFPQGRTL------DKDPCTIQEWNEGKIPLLFAH 115 I++ F D A +++ R D+ N+ + Sbjct: 653 GHKILIFSQFKGQLDILEDWATQLRSWNCCRIDGAIAQADRQEQINAFNNDPDYRIFLLS 712 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ ++ + R + G + V VY L + T Sbjct: 713 TRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTKPVIVYRLATRGT 766 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 I++ +L+R +K ++ L++ K +++ Sbjct: 767 IEQTLLERAGSKRRLEKLVIQKGKFKSL 794 >gi|256269545|gb|EEU04829.1| Sth1p [Saccharomyces cerevisiae JAY291] Length = 1359 Score = 94.8 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 66/196 (33%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE------KIKALEVII------EKANAAPIIVAY 75 K ++ ++ N +DE + ++ ++ KA+ +++ + Sbjct: 755 KIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFF 814 Query: 76 H----------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 F ++ + +N + G GL Sbjct: 815 QMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGL 874 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K V + LI ++++E++L+R Sbjct: 875 NLQT-ADTVIIFDTDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 928 Query: 184 LRTKSTIQDLLLNALK 199 K I ++ A K Sbjct: 929 AMQKLDIDGKVIQAGK 944 >gi|145349184|ref|XP_001419020.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579250|gb|ABO97313.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 956 Score = 94.8 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 26/223 (11%), Positives = 72/223 (32%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q+ Y + ++I+ NS + ++ + N + Sbjct: 332 EMQKTFYKRILQKDIDIVNSGADRSRLLNIVMQLRKCCNHPYLFQGAEPGPPYITGDHLI 391 Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 K+ L+ ++ + +++ L L+ Sbjct: 392 ESSGKLALLDKLLPRLMQRGSRVLIFSQMTRLLDILEDYLMYRNYQYCRIDGSTDGAVRE 451 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N+ + G G+NL + ++ + W+ + ++ + R Sbjct: 452 DHIDAFNKEGSEKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPQ-----MDLQAMDRA 505 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ +++E V+++ K + L++ + Sbjct: 506 HRIGQKKEVQVFRFCTDGSVEEKVIEKAYKKLALDALVIQQGR 548 >gi|313231904|emb|CBY09016.1| unnamed protein product [Oikopleura dioica] Length = 1677 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 26/230 (11%), Positives = 63/230 (27%), Gaps = 39/230 (16%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + L + + ++ + N + Sbjct: 621 KYYRAILERNFDFLSKGASTGNVPSLMNTMMELRKCCNHPFLIKGAEDKIIDEYRAKGEV 680 Query: 53 ----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD--- 97 K+ + ++ K +++ L L+ Q + Sbjct: 681 ADPLTSIVQASGKMVLIHKLLPKLKAGGHKVLIFSQMIRVLDILEDYLYQMSMGFERLDG 740 Query: 98 -------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I + + + + G G+NL + ++ F W+ + Sbjct: 741 RIRGNDRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN----- 794 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + R + G K+ V +Y L+ T + + R K + +L ++ Sbjct: 795 DLQAQARCHRIGQKKEVKIYRLLTSKTYEREMFDRASLKLGLDRAVLQSM 844 >gi|294658394|ref|XP_002770778.1| DEHA2F08470p [Debaryomyces hansenii CBS767] gi|202953094|emb|CAR66304.1| DEHA2F08470p [Debaryomyces hansenii] Length = 1923 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 37/264 (14%), Positives = 74/264 (28%), Gaps = 75/264 (28%) Query: 2 KQYHKFQR--------ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--- 50 + Y F + E+ + + +L N H K Sbjct: 1582 QLYKDFAKKQKSTVVDEVQSEGDEAKEGKTHVFQALQYMRKLCNHPALVLSPDHPKFAEV 1641 Query: 51 --------------VHDEKIKALEVIIEKA------------------------------ 66 H K+ +L+ ++ + Sbjct: 1642 STYLQSHKSDIRSIEHSPKLMSLKNLLLECGIGVNDNDYLSANYKQKQKQQQMITSEGVI 1701 Query: 67 NAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + ++ L ++++N + I +L Sbjct: 1702 SEHRALIFCQLKDMLDIVENELLKKYLPSVTYTRLDGSTDPRDRQSIVRKFNEDPSIDVL 1761 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G GLNL G + ++F W+ M + + R + G K+ V VY LI Sbjct: 1762 LLTTKVGGLGLNLT-GADTVIFVEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRLIT 1815 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 +NT++E ++ + K I ++N Sbjct: 1816 KNTLEEKIMGLQKFKMNIASTIVN 1839 >gi|49257014|dbj|BAD24805.1| lymphoid specific helicase variant10 [Homo sapiens] Length = 782 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 564 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 623 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 624 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 683 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 684 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 737 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 738 AKRKLEKLIIH 748 >gi|21914927|ref|NP_060533.2| lymphoid-specific helicase [Homo sapiens] gi|74761670|sp|Q9NRZ9|HELLS_HUMAN RecName: Full=Lymphoid-specific helicase; AltName: Full=Proliferation-associated SNF2-like protein; AltName: Full=SWI/SNF2-related matrix-associated actin-dependent regulator of chromatin subfamily A member 6 gi|8980660|gb|AAF82262.1| proliferation-associated SNF2-like protein [Homo sapiens] gi|17384047|emb|CAD13191.1| helicase, lymphoid-specific [Homo sapiens] gi|119570420|gb|EAW50035.1| helicase, lymphoid-specific, isoform CRA_j [Homo sapiens] gi|148922411|gb|AAI46309.1| Helicase, lymphoid-specific [synthetic construct] gi|189069422|dbj|BAG37088.1| unnamed protein product [Homo sapiens] gi|261857602|dbj|BAI45323.1| helicase, lymphoid-specific [synthetic construct] Length = 838 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 564 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 623 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 624 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 683 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 684 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 737 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 738 AKRKLEKLIIH 748 >gi|58261190|ref|XP_568005.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134115795|ref|XP_773611.1| hypothetical protein CNBI2250 [Cryptococcus neoformans var. neoformans B-3501A] gi|74682377|sp|Q5K8T2|SWR1_CRYNE RecName: Full=Helicase SWR1 gi|50256237|gb|EAL18964.1| hypothetical protein CNBI2250 [Cryptococcus neoformans var. neoformans B-3501A] gi|57230087|gb|AAW46488.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 1246 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 62/159 (38%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPC 99 K++ L ++ K+ +++ L L+ Sbjct: 936 DCGKLQKLFEMLRDLKSEGHRVLIFTQMTRVLDILEMFLSHNGHRYLRLDGSTKIEDRQV 995 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + +I + A S G G+NL G + + F+ W+ ++R + R + Sbjct: 996 LTERFNSDSRIFVFIASSRSGGVGINLT-GADTVFFYDSDWNPS-----MDRQCMDRAHR 1049 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V +Y ++ +T++E +L++ K + +++ Sbjct: 1050 IGQTREVHIYRFVSSHTVEENMLRKAEQKRLLDKMVIQE 1088 >gi|238814383|ref|NP_001154953.1| RAD54-like [Nasonia vitripennis] Length = 749 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 73/231 (31%), Gaps = 47/231 (20%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE------------------- 45 Q + + ++ A ++ + K N E+ Sbjct: 438 KSMQDDGTA--KKGSLSALSAITLLKKL---CNHPDLVYEKIQENSDGFEGAAKLLPANY 492 Query: 46 --KHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAF----------PQ 90 K K+ L+ ++ + I++ ++ L ++ Sbjct: 493 STKEVMPELSGKLMVLDCLLAFIKSTTTDKIVLVSNYTQTLDLFERLCAKRKYKYVRLDG 552 Query: 91 GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ K + +N + + G GLNL G N LV F W+ Sbjct: 553 TMSIKKRAKVVDNFNNPDSGDFIFMLSSKAGGCGLNL-VGANRLVMFDPDWNPAN----- 606 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + R + G K+ FVY + TI+E + QR K + +++ + Sbjct: 607 DDQAMARVWRDGQKKPCFVYRFLCTGTIEEKIFQRQAHKKALSSTVVDQDE 657 >gi|71649758|ref|XP_813592.1| helicase-like protein [Trypanosoma cruzi strain CL Brener] gi|70878490|gb|EAN91741.1| helicase-like protein, putative [Trypanosoma cruzi] Length = 929 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 73/235 (31%), Gaps = 49/235 (20%) Query: 6 KFQRELY-----CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 + QR+L L G+ A + + + Sbjct: 444 RLQRQLLFRMTEQALNGDKANATRLQAHFTHQRIVCCHPLALRILGVEVRASAQAGWEER 503 Query: 52 ---------------HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF------ 88 K+ L+ ++ + N ++ +F S L LQ Sbjct: 504 LASAGIELDEASIIAPSAKMIELDRMLREFKANGHRCLIFSNFTSILDLLQALCVLRGYG 563 Query: 89 ----PQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ +N + + G G+ L G + ++ F ++ + Sbjct: 564 FERIDGSTPRVERELSMIRFNAPGSACFVFLLTTTAGGVGVTLT-GADTVILFDAHYNPQ 622 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+R R + G R V V+ L +NTI+E + K+++ D +++ Sbjct: 623 -----IDRQAADRAHRIGQTRVVRVHRLCLKNTIEERIHDVALRKASLGDFIVDG 672 >gi|328867774|gb|EGG16155.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 2377 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 7/141 (4%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 +I I + F L+ + ++ + I + +CG Sbjct: 2034 LIYCQMTKMINILEDFVIFRKYKYLRLDGSSKLEDRRDLVDDFQSDQSIFVFLLSTRACG 2093 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + ++FF W+ ++ + R + G +R V VY L+ + T++E V Sbjct: 2094 IGINLTA-ADTVIFFDSDWNPT-----MDEQAMDRCHRLGQQRPVTVYRLVTKGTVEERV 2147 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 ++R + K IQ +++ K E Sbjct: 2148 IKRAKQKHQIQSIVIAGGKFE 2168 >gi|254583686|ref|XP_002497411.1| ZYRO0F04906p [Zygosaccharomyces rouxii] gi|238940304|emb|CAR28478.1| ZYRO0F04906p [Zygosaccharomyces rouxii] Length = 848 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 43/224 (19%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------------DEKI 56 + + +L N D + + + K Sbjct: 548 KGVGGTQPLKAIGLLKKLCNHPDLVDFNEEIENLDEISIPDDYEWNSKRKDLQVKYSSKF 607 Query: 57 KALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 LE + + I++ ++ L ++K Q ++K + Sbjct: 608 SILERFLAKIRSESDDKIVIISNYTQTLDLIEKLCRQKRYGSVRLDGTMGINKRQKLVDR 667 Query: 104 WNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N+ + + + G G+NL G N L+ W+ Q + R + G Sbjct: 668 FNDPEGQEFVFLLSSKAGGCGINL-IGANRLILLDPDWNPAADQ-----QALARVWRDGQ 721 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 K+ F+Y I+ +I+E + QR K ++ +++A K++ + Sbjct: 722 KKDCFIYRFISTGSIEEKIYQRQSMKLSLSSCVVDA-KEDVERL 764 >gi|312071855|ref|XP_003138800.1| hypothetical protein LOAG_03215 [Loa loa] gi|307766034|gb|EFO25268.1| hypothetical protein LOAG_03215 [Loa loa] Length = 1112 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 67/199 (33%), Gaps = 34/199 (17%) Query: 25 SASKTVKCLQLANGAVYY---------------DEEKHWKEVHDEKIKALEVII--EKAN 67 + + +L N +E K++ L+ ++ K Sbjct: 539 AFVGLITLRKLCNHPDLITGGPNKFNDYSVTAENEMDFGAPCRSGKMQVLKALLKLWKQQ 598 Query: 68 AAPIIVAYHFNSDLAR---------LQKAFPQGRTLDK-DPCTIQEWNE-GKIPLLFAHP 116 +++ L + G T + ++++N+ +I + Sbjct: 599 DQKVLLFSQSRQMLTILEKFVIQEGYEYLRMDGTTPVRSRQLLVEKFNKVDEIFIFLLTT 658 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G G+NL G N +V F W+ + R + G +RAV +Y L+ TI Sbjct: 659 RVGGLGINLT-GANRVVIFDPDWNPST-----DIQARERAWRIGQERAVTIYRLLTGGTI 712 Query: 177 DELVLQRLRTKSTIQDLLL 195 +E + R K + + +L Sbjct: 713 EEKIYHRQIFKVFLSNRIL 731 >gi|114631879|ref|XP_001151268.1| PREDICTED: helicase, lymphoid-specific isoform 10 [Pan troglodytes] Length = 838 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 564 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 623 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 624 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 683 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 684 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 737 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 738 AKRKLEKLIIH 748 >gi|62087266|dbj|BAD92080.1| BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa variant [Homo sapiens] Length = 699 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 379 VQLYEDFAKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 438 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 439 QHPEFKTTAEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRIL 498 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 499 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 558 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 559 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 612 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 613 KIMGLQKFKMNIANTVIS 630 >gi|14090511|gb|AAK53539.1| DOMINO B [Drosophila melanogaster] Length = 2497 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 69/184 (37%), Gaps = 19/184 (10%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 +K + + + + K++ ++ ++ + N +++ L L Sbjct: 1631 AKLALLHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVL 1690 Query: 85 QKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + + ++ +N + +I S G G+NL G + ++ Sbjct: 1691 EAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADTVI 1749 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F+ W+ ++ R + G R V +Y L+++ TI+ +L++ K + D+ Sbjct: 1750 FYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDM 1804 Query: 194 LLNA 197 + Sbjct: 1805 AIEG 1808 >gi|26333481|dbj|BAC30458.1| unnamed protein product [Mus musculus] Length = 278 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/202 (12%), Positives = 71/202 (35%), Gaps = 28/202 (13%) Query: 20 IEAFNSASKTVKCLQLANGAVYY--------DEEKHWKEVHDEKIKALEVIIEK--ANAA 69 ++ + ++ + N + + K+ L+ ++ K + Sbjct: 1 MDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGS 60 Query: 70 PIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKI--PLLFAHPA 117 +++ L L+ D+ +I +NE + Sbjct: 61 RVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTR 120 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL ++++ + W+ + ++ + R + G + V V+ I NT++ Sbjct: 121 AGGLGINL-ATADVVILYDSDWNPQ-----VDLQAMDRAHRIGQTKTVRVFRFITDNTVE 174 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E +++R K + +++ + Sbjct: 175 ERIVERAEMKLRLDSIVIQQGR 196 >gi|324500109|gb|ADY40062.1| Chromodomain-helicase-DNA-binding protein 1 [Ascaris suum] Length = 1095 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 79/222 (35%), Gaps = 31/222 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y +L + N ++ + N A H++E Sbjct: 745 QYYKWILTKNYKELSKGVKGSINGFVNLIMELKKCCNHASLVRAYDHYEENAQARLQQLM 804 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 K+ L+ ++ + + +++ L +Q+ R + Sbjct: 805 KSSGKLILLDKLLCRLHETGHRVLIFSQMVMMLDIVQEYLQLRRFPSQRLDGSMRADLRK 864 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL + ++ F W+ + + ++R Sbjct: 865 AALDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAMSRA 918 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + +++E +++R + K + L++ + Sbjct: 919 HRIGQKKQVNIYRLVTKASVEEEIVERAKRKLVLDHLVIQRM 960 >gi|242094948|ref|XP_002437964.1| hypothetical protein SORBIDRAFT_10g005630 [Sorghum bicolor] gi|241916187|gb|EER89331.1| hypothetical protein SORBIDRAFT_10g005630 [Sorghum bicolor] Length = 1147 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 73/223 (32%), Gaps = 30/223 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG----------AVYYDEEKHWKEV 51 + Y + Y L N + + ++ +L +E Sbjct: 364 EYYKAILTKNYEVLARRNGGHTSLINVVMELRKLCCHGFMIDEPDFEPANPEEGLRRLLD 423 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPC 99 K++ L+ ++ K +++ F L + + + Sbjct: 424 SSGKMQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKISGAERQI 483 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + + R Sbjct: 484 RIDRFNAKNSTRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAH 537 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G V +Y L+++ TI+E ++Q + K ++ L++ L K Sbjct: 538 RLGQTSKVMIYRLVSRGTIEERMMQLTKKKILLEHLVVGRLTK 580 >gi|194041750|ref|XP_001929005.1| PREDICTED: lymphoid-specific helicase [Sus scrofa] Length = 837 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 63/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 563 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKIRGHKVLLFSQ 622 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + + +N + + + + G G+NL Sbjct: 623 MTRMLDILMDYCHFRNFNFSRLDGSMSYTEREKNMHSFNTDPDVFIFLVSTRAGGLGINL 682 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 683 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 736 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 737 AKRKLEKLIIH 747 >gi|308198272|ref|XP_001386950.2| protein required for X-ray damage repair, mitotic recombination, and full meiotic recombination. mRNA increases in meiosis [Scheffersomyces stipitis CBS 6054] gi|149388940|gb|EAZ62927.2| protein required for X-ray damage repair, mitotic recombination, and full meiotic recombination. mRNA increases in meiosis [Pichia stipitis CBS 6054] Length = 821 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 74/219 (33%), Gaps = 46/219 (21%) Query: 26 ASKTVKCLQLANGAVYYD------------------------EEKHWKEVHDEKIKALEV 61 +L N + + + + K LE Sbjct: 527 LKAIGMLKKLCNHPDLLNLPDDFEGSEKFIPEDYCSSIGSGGRNREVQSWYSGKFMILER 586 Query: 62 IIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGK 108 + + I++ ++ L +++ + +++K + ++N+ + Sbjct: 587 FLYQIRSQTNDKIVLISNYTQTLDLIERMCRHKKYGSLRLDGTLSINKRQKLVDKFNDPE 646 Query: 109 IP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G G+NL G N L+ W+ Q + R + G K+ F Sbjct: 647 GNEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAADQ-----QALARVWRDGQKKDCF 700 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +Y I+ TI+E + QR K ++ +++ K++ + Sbjct: 701 IYRFISTGTIEEKIFQRQSMKMSLSSCVVDE-KEDVERL 738 >gi|149944717|ref|NP_001092585.1| probable global transcription activator SNF2L2 [Bos taurus] gi|148745424|gb|AAI42522.1| SMARCA2 protein [Bos taurus] gi|296484787|gb|DAA26902.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 [Bos taurus] Length = 1554 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 959 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1018 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1019 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1078 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1079 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1134 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1135 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1183 >gi|296220822|ref|XP_002756499.1| PREDICTED: lymphoid-specific helicase isoform 1 [Callithrix jacchus] Length = 837 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 66/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + ++ K L+ ++ + +++ Sbjct: 563 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVINSGKFLILDRMLPELKKRGHKVLLFSQ 622 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 623 MTSMLDILMDYCHLRNFNFSRLDGSMSYSERERNMHSFNTDPEVFIFLVSTRAGGLGINL 682 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 683 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 736 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 737 AKRKLEKLIIH 747 >gi|73946659|ref|XP_860605.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 27 [Canis familiaris] Length = 1540 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 945 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1004 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1005 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1064 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1065 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1120 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1121 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1169 >gi|312376441|gb|EFR23522.1| hypothetical protein AND_12719 [Anopheles darlingi] Length = 875 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 74/235 (31%), Gaps = 42/235 (17%) Query: 6 KFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH---------------- 47 + R + E A ++ N Sbjct: 516 QLLRTALTFYEEERSGSNAITPLQLITILKKICNHPSLVKVTGRGDPESLLHRLADQLPD 575 Query: 48 ---WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD------- 95 K+ ++ ++E +++ ++N L + Sbjct: 576 WQAMGPSDSAKLAIVDTLLEDLIVKQEKVVIVSYYNKTLDMIAGLCEHYNYKHSRLDGST 635 Query: 96 ---KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + +N I +L + G GLNL G + LV + W+ + Sbjct: 636 VASDRSKIVATFNNAASDIFILLLSAKAGGAGLNL-IGASRLVLYDNDWNPAN-----DL 689 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++R + G R VF+Y L+ +I+E + QR +K+++ +++ K+ ++ Sbjct: 690 QAMSRVWRDGQTRTVFIYRLLTAFSIEERIFQRQISKTSLSGTVVDQ-KRNMNNL 743 >gi|167535979|ref|XP_001749662.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771810|gb|EDQ85471.1| predicted protein [Monosiga brevicollis MX1] Length = 1288 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 71/216 (32%), Gaps = 46/216 (21%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE--------------------V 61 A + + ++ +L + E + +++ E ++ + Sbjct: 740 ARSLQNVVMQMRKLCCHPFLFKEVE--QDLKSELLRHEDAATALANLNGLELWRTAGKLE 797 Query: 62 IIEKA------NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +++ I++ F + L K + ++N Sbjct: 798 LLDHMIPKLRRFGHRILLFSQFTTMLDILEDYFRYRRLKYCRMDGTCGAAKRAELLHDFN 857 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G GLNLQ + +V F W+ + + R + G + Sbjct: 858 APDSDLEIFILSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ-----DLQAQDRAHRIGQTK 911 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ L+ +++E +L+R R K + ++ A K Sbjct: 912 EVRVFRLVTVQSVEERMLERAREKLDVDQQVIQAGK 947 >gi|321460021|gb|EFX71068.1| hypothetical protein DAPPUDRAFT_309233 [Daphnia pulex] Length = 1322 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 14/167 (8%) Query: 44 EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 +K K++ L+ ++ K+ +++ + L++ Sbjct: 1116 PDKETLICDAGKLQVLDALLRRLKSEGHRVLIYSQMTRIIDLLEEYMWHRKWTYMRLDGS 1175 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + D+ I + + G G+NL + ++F+ W+ QQ ++R Sbjct: 1176 SKISDRRDMVADFQTRSDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPTVDQQAMDR 1234 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q + + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1235 AHRLGQTKQAREHIVTVYRLICKGTIEERILQRAREKSKIQKIVISG 1281 >gi|254584336|ref|XP_002497736.1| ZYRO0F12320p [Zygosaccharomyces rouxii] gi|238940629|emb|CAR28803.1| ZYRO0F12320p [Zygosaccharomyces rouxii] Length = 983 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 74/224 (33%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 + Q Y L ++I+A N + ++ + N + Sbjct: 305 EMQVHWYKSLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 364 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQGRTL 94 + K+ L+ ++ K + +++ + Sbjct: 365 EHLVYNAGKMIVLDKLLKKMKEKGSRVLIFSQMSRLLDILEDYCYFRDYEYCRIDGSTAH 424 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N+ + + G G+NL + +V + W+ + + Sbjct: 425 EDRIEAIDEFNKPDSDKFVFLLTTRAGGLGINLVT-ADTVVLYDSDWNPQA-----DLQA 478 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V VY + ++ I+E V++R K + L++ Sbjct: 479 MDRAHRIGQKKQVHVYRFVTESAIEEKVIERAAQKLRLDQLVIQ 522 >gi|109090016|ref|XP_001095267.1| PREDICTED: lymphoid-specific helicase isoform 9 [Macaca mulatta] Length = 707 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 433 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 492 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 493 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNMDPEVFIFLVSTRAGGLGINL 552 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NT+D+ +++R Sbjct: 553 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTVDQKIVERAA 606 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 607 AKRKLEKLIIH 617 >gi|172764|gb|AAA35120.1| STH1 protein [Saccharomyces cerevisiae] Length = 1352 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 66/196 (33%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE------KIKALEVII------EKANAAPIIVAY 75 K ++ ++ N +DE + ++ ++ KA+ +++ + Sbjct: 755 KIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFF 814 Query: 76 H----------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 F ++ + +N + G GL Sbjct: 815 QMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGL 874 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K V + LI ++++E++L+R Sbjct: 875 NLQT-ADTVIIFDTDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 928 Query: 184 LRTKSTIQDLLLNALK 199 K I ++ A K Sbjct: 929 AMQKLDIDGKVIQAGK 944 >gi|73946663|ref|XP_860667.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 29 [Canis familiaris] Length = 1547 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 952 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1011 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1012 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1071 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1072 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1127 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1128 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1176 >gi|154338237|ref|XP_001565343.1| DNA repair and recombination protein RAD54 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062392|emb|CAM42253.1| putative DNA repair and recombination protein RAD54 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1126 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 18/149 (12%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKI 109 + + E +++ +F L + + K + +N Sbjct: 802 DELRENGEHDKLVIVSNFTQTLDIIAALCNSKRIAYFQLDGSTPIKKRQQLVDYFNVPDS 861 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N L+ F W+ + + R + G K+ VF+ Sbjct: 862 QEVVFLLSSKAGGVGLNL-IGANRLILFDPDWNPAN-----DAQAMGRVWRDGQKKRVFI 915 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y L++ TI+E + QR +K + +++ Sbjct: 916 YRLLSTGTIEEKIYQRQVSKQGLSANVVD 944 >gi|88603125|ref|YP_503303.1| SNF2-like protein [Methanospirillum hungatei JF-1] gi|88188587|gb|ABD41584.1| SNF2-related protein [Methanospirillum hungatei JF-1] Length = 886 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 68/209 (32%), Gaps = 22/209 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ L+ A + Q+ N + ++ K+ L Sbjct: 652 LYQAVVEDMAQSLETVTGLARRGVIFRAITRLKQICNHPGLFIHDRGVLPERSGKVSRLL 711 Query: 61 VIIEK--ANAAPIIVAYH---FNSDLARLQKAFP---------QGRTLDKDPCTIQEWNE 106 ++E+ ++ F LAR+ + + +++ + + Sbjct: 712 EMLEEVSEEGDSALIFTQYATFAEYLARILEERFLIPVFLLTGKTSRRERERLVREFQSS 771 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL + WW+ +E R + G K+ V Sbjct: 772 KEPSFFVISLKAGGTGLNLTA-ATHVFHVDRWWNPA-----VEDQATDRTYRIGQKQNVQ 825 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ +IA T++E + + K + +L Sbjct: 826 VHLMIAAGTLEEQIDRINAEKRILGREVL 854 >gi|20988306|gb|AAH29930.1| BTAF1 protein [Homo sapiens] Length = 680 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 360 VQLYEDFAKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 419 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 420 QHPEFKTTAEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRIL 479 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 480 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 539 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 540 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 593 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 594 KIMGLQKFKMNIANTVIS 611 >gi|73946671|ref|XP_850159.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform a isoform 2 [Canis familiaris] Length = 1574 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 961 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1020 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1021 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1080 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1081 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1136 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1185 >gi|6322065|ref|NP_012140.1| Sth1p [Saccharomyces cerevisiae S288c] gi|417373|sp|P32597|STH1_YEAST RecName: Full=Nuclear protein STH1/NPS1; AltName: Full=ATP-dependent helicase STH1; AltName: Full=Chromatin structure-remodeling complex protein STH1; AltName: Full=SNF2 homolog gi|218449|dbj|BAA01446.1| nuclear protein [Saccharomyces cerevisiae] gi|599991|emb|CAA86866.1| nuclear protein [Saccharomyces cerevisiae] gi|285812528|tpg|DAA08427.1| TPA: Sth1p [Saccharomyces cerevisiae S288c] Length = 1359 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 66/196 (33%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE------KIKALEVII------EKANAAPIIVAY 75 K ++ ++ N +DE + ++ ++ KA+ +++ + Sbjct: 755 KIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFF 814 Query: 76 H----------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 F ++ + +N + G GL Sbjct: 815 QMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGL 874 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K V + LI ++++E++L+R Sbjct: 875 NLQT-ADTVIIFDTDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 928 Query: 184 LRTKSTIQDLLLNALK 199 K I ++ A K Sbjct: 929 AMQKLDIDGKVIQAGK 944 >gi|158293462|ref|XP_314800.4| AGAP008698-PA [Anopheles gambiae str. PEST] gi|157016718|gb|EAA10171.4| AGAP008698-PA [Anopheles gambiae str. PEST] Length = 2083 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 26/223 (11%), Positives = 70/223 (31%), Gaps = 39/223 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------- 50 K + ++ G + ++ + N A + + Sbjct: 857 KNFDALRK-------GMKGSVGTFLNIVIELKKCCNHAALTRPIEFETQRNSQQDVVQQL 909 Query: 51 -VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------D 97 K+ L+ ++ K +++ L L + + + Sbjct: 910 LKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHFSFQRLDGSIKGELR 969 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + G G+NL + ++ F W+ + + R Sbjct: 970 KQALDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQAR 1023 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ ++++E +++R + K + L++ + Sbjct: 1024 AHRIGQKNQVNIYRLVTAHSVEENIVERAKQKMVLDHLVIQRM 1066 >gi|125538184|gb|EAY84579.1| hypothetical protein OsI_05951 [Oryza sativa Indica Group] Length = 936 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 85/261 (32%), Gaps = 67/261 (25%) Query: 1 MKQYHKF-----QRELYCDLQGENIEAF--------NSASKTVKCLQLANGAVYYDEEKH 47 +K Y KF ++E+ ++ ++ + L+L + + E Sbjct: 604 LKLYDKFSNSNAKQEISTIVKENELDQSTSQPKATRHVFQALQYLLKLCSHPLLVTGESP 663 Query: 48 WKEV-------------------HDEKIKALEVIIEKAN---------------AAPIIV 73 + H K+ AL+ I+++ +++ Sbjct: 664 PDYLVDLLKEIGMGTGDELHDLHHSPKLVALQEILQECGIGSEISSPDASAAIGQHRVLI 723 Query: 74 AYHFN-------------SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 + +K ++ +N + I +L Sbjct: 724 FAQHKALLDIIEKDLFQSHMRSVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVLLLTTHVG 783 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + LVF W+ M + + R + G ++ V V+ LI + T++E Sbjct: 784 GLGLNLTS-ADTLVFMEHDWNP-----MKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEK 837 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 V+ R K ++ + ++NA Sbjct: 838 VMSLQRFKVSVANAVINAENA 858 >gi|221504382|gb|EEE30057.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii VEG] Length = 1139 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 80/213 (37%), Gaps = 24/213 (11%) Query: 3 QYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---HDEKIKA 58 Y + Q + + ++ + ++ ++AN + +E E K + Sbjct: 464 VYKQIQEKGLRTVDQVGHVTKRGFQNTLMQLRKIANHPYLFVDEYLVNEDLVRVAGKFEC 523 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNE 106 L+ ++ K +++ L + + + ++E+N Sbjct: 524 LDRMLPKLLHFKHKVLIFSQMTQVLDLMAEYMHLRGYKYARLDGSVGLTERKERMEEFNN 583 Query: 107 GKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++ + + G GLNLQ + +V F ++ + + + R + G + Sbjct: 584 AEVDTMIFMLSTRAGGLGLNLQA-ADTVVLFDSDFNPHQ-----DLQAMCRAHRLGQTKQ 637 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L+ + ++E++L++ K I +++ A Sbjct: 638 VKVFRLVTISGVEEIILEKANRKLNIDQMVIQA 670 >gi|71064092|gb|AAZ22501.1| Sth1p [Saccharomyces cerevisiae] Length = 1359 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 66/196 (33%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE------KIKALEVII------EKANAAPIIVAY 75 K ++ ++ N +DE + ++ ++ KA+ +++ + Sbjct: 755 KIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFF 814 Query: 76 H----------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 F ++ + +N + G GL Sbjct: 815 QMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGL 874 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K V + LI ++++E++L+R Sbjct: 875 NLQT-ADTVIIFDTDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 928 Query: 184 LRTKSTIQDLLLNALK 199 K I ++ A K Sbjct: 929 AMQKLDIDGKVIQAGK 944 >gi|24656966|ref|NP_524833.2| domino, isoform A [Drosophila melanogaster] gi|160380691|sp|Q9NDJ2|DOM_DROME RecName: Full=Helicase domino gi|21645214|gb|AAM70871.1| domino, isoform A [Drosophila melanogaster] Length = 3198 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 67/179 (37%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 + + + + K++ ++ ++ + N +++ L L+ Sbjct: 1636 LHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLN 1695 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ +N + +I S G G+NL G + ++F+ Sbjct: 1696 YHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSD 1754 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1755 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 1808 >gi|317142811|ref|XP_001819108.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40] Length = 1137 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 63/169 (37%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 ++ + + KI+ L I+ +++ IV F S L +++ + Sbjct: 885 LNPGDEDNQVLPSTKIRHLMKILRRESSDYKFIVFSVFTSMLDKIEPFLQRAGIGFARYD 944 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 R ++ + N +L + GLNL + +V +W+ + Sbjct: 945 GGMRNDLREASLNKLRNNSGTRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FV 998 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E + R + V +Y LI ++T++E ++ K + ++ + Sbjct: 999 EEQAIDRVHRLNQTVDVKIYKLIIKDTVEERIIDLQERKRELANVTIEG 1047 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 14/43 (32%), Gaps = 4/43 (9%) Query: 4 YHKFQRE----LYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + ++ L + G ++ + ++ Q N Sbjct: 644 YKRLEQRTDNSLEKMMGGSKLDYAGALVLLLRLRQSCNHPDLV 686 >gi|312071167|ref|XP_003138483.1| hypothetical protein LOAG_02898 [Loa loa] gi|307766356|gb|EFO25590.1| hypothetical protein LOAG_02898 [Loa loa] Length = 755 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 76/238 (31%), Gaps = 51/238 (21%) Query: 2 KQYHKFQ-------RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------- 45 K Y + ++ + A S +L N + Sbjct: 411 KLYRQLISTFSMGGKQKVTEGDKITGTA---LSFITNLKKLCNHPQLIFNKCQKKEEGFE 467 Query: 46 -----------KHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDL---------- 81 + ++ K+K L+ ++ ++ ++ + Sbjct: 468 GCLKLFPGEFGRKFEPAFSGKMKVLDYLLAATRTTTNDKFVLVSNYTQTIDAFVELCQLR 527 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 T+ + ++++N+ K + + G GLNL G N L+ F W Sbjct: 528 RYPYIRLDGTCTIKQRAKLVEKFNDPKSVEYVFLLSSKAGGCGLNL-IGANRLIMFDPDW 586 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G ++ F+Y L+A +I+E + QR K + +++ Sbjct: 587 NPAN-----DDQAMARVWRDGQRKNCFIYRLLASGSIEEKMFQRQAHKKALSSCVIDE 639 >gi|238501732|ref|XP_002382100.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] gi|220692337|gb|EED48684.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] Length = 1158 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 63/169 (37%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 ++ + + KI+ L I+ +++ IV F S L +++ + Sbjct: 906 LNPGDEDNQVLPSTKIRHLMKILRRESSDYKFIVFSVFTSMLDKIEPFLQRAGIGFARYD 965 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 R ++ + N +L + GLNL + +V +W+ + Sbjct: 966 GGMRNDLREASLNKLRNNSGTRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FV 1019 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E + R + V +Y LI ++T++E ++ K + ++ + Sbjct: 1020 EEQAIDRVHRLNQTVDVKIYKLIIKDTVEERIIDLQERKRELANVTIEG 1068 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 14/43 (32%), Gaps = 4/43 (9%) Query: 4 YHKFQRE----LYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + ++ L + G ++ + ++ Q N Sbjct: 665 YKRLEQRTDNSLEKMMGGSKLDYAGALVLLLRLRQSCNHPDLV 707 >gi|25013136|gb|AAN71681.1| SD16865p [Drosophila melanogaster] Length = 673 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 78/252 (30%), Gaps = 58/252 (23%) Query: 1 MKQYHKF----QRELYCDLQGENIEAF---------NSASKTVKCLQLANGAVYYDEEKH 47 ++ Y F ++ L + + + + N + Sbjct: 358 LRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSE 417 Query: 48 WKEV----------------HDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLA 82 H K+ AL+ ++ + ++ + L Sbjct: 418 ELTKVTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLD 477 Query: 83 RLQKAFPQGR-------------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 +++ + + + +N + I +L G GLNL G Sbjct: 478 IVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLT-G 536 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ M + + R + G K+ V VY LI +N+++E ++ + K Sbjct: 537 ADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKI 591 Query: 189 TIQDLLLNALKK 200 + +++A Sbjct: 592 LTANTVVSAENA 603 >gi|83766966|dbj|BAE57106.1| unnamed protein product [Aspergillus oryzae] Length = 1157 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 63/169 (37%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 ++ + + KI+ L I+ +++ IV F S L +++ + Sbjct: 905 LNPGDEDNQVLPSTKIRHLMKILRRESSDYKFIVFSVFTSMLDKIEPFLQRAGIGFARYD 964 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 R ++ + N +L + GLNL + +V +W+ + Sbjct: 965 GGMRNDLREASLNKLRNNSGTRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FV 1018 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E + R + V +Y LI ++T++E ++ K + ++ + Sbjct: 1019 EEQAIDRVHRLNQTVDVKIYKLIIKDTVEERIIDLQERKRELANVTIEG 1067 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 14/43 (32%), Gaps = 4/43 (9%) Query: 4 YHKFQRE----LYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + ++ L + G ++ + ++ Q N Sbjct: 664 YKRLEQRTDNSLEKMMGGSKLDYAGALVLLLRLRQSCNHPDLV 706 >gi|190406337|gb|EDV09604.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Saccharomyces cerevisiae RM11-1a] Length = 1359 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 66/196 (33%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE------KIKALEVII------EKANAAPIIVAY 75 K ++ ++ N +DE + ++ ++ KA+ +++ + Sbjct: 755 KIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFF 814 Query: 76 H----------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 F ++ + +N + G GL Sbjct: 815 QMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGL 874 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K V + LI ++++E++L+R Sbjct: 875 NLQT-ADTVIIFDTDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 928 Query: 184 LRTKSTIQDLLLNALK 199 K I ++ A K Sbjct: 929 AMQKLDIDGKVIQAGK 944 >gi|119570414|gb|EAW50029.1| helicase, lymphoid-specific, isoform CRA_d [Homo sapiens] Length = 700 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 426 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 485 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 486 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 545 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 546 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 599 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 600 AKRKLEKLIIH 610 >gi|157128256|ref|XP_001661368.1| hypothetical protein AaeL_AAEL002341 [Aedes aegypti] gi|108882255|gb|EAT46480.1| conserved hypothetical protein [Aedes aegypti] Length = 851 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 66/229 (28%), Gaps = 40/229 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-------------------- 41 K R + + + ++ N Sbjct: 503 KLQETLLRTAIQFYEKSDRSTYFPLQLITVLKKICNHPSLIASTEKIDVGGSLIKLLNDN 562 Query: 42 ---YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN---------SDLARLQKAFP 89 + + + +L + + +IV+Y+ Sbjct: 563 LPPWQDMGPTDSGKLAVLDSLLETLIQRQEKAVIVSYYGKTLDMIMGLCEHYNYKYCRLD 622 Query: 90 QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + +N + + G GLNL G + L+ + W+ Sbjct: 623 GSTPSQDRCKIVSSFNSPSSDTFIFLLSAKAGGIGLNLT-GASRLILYDNDWNPAS---- 677 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++R + G R VF+Y LI +I+E + QR +K+++ +++ Sbjct: 678 -DLQAMSRIWRDGQTRNVFIYRLITAFSIEEKIYQRQISKTSLSGTVVD 725 >gi|255565952|ref|XP_002523964.1| TATA-binding protein-associated factor MOT1, putative [Ricinus communis] gi|223536691|gb|EEF38332.1| TATA-binding protein-associated factor MOT1, putative [Ricinus communis] Length = 1920 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 86/267 (32%), Gaps = 73/267 (27%) Query: 1 MKQYHKF----QRELYCDLQGENIEA------------FNSASKTVKCLQLANGAVYYDE 44 +K Y +F ++ + + A + L+L + + Sbjct: 1582 LKLYDQFSGSHVKQEISSMVKVDDSACREGNSASPKASSHVFQALQYLLKLCSHPLLVLG 1641 Query: 45 EKHWKEV----------------------HDEKIKALEVIIEKAN--------------- 67 EK + + H K+ AL+ I+E+ Sbjct: 1642 EKMHESLASQLAGILPANSDIISELHKLHHSPKLVALQEILEECGIGVDISSSENAVNVG 1701 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT-------------LDKDPCTIQEWN-EGKIPLLF 113 +++ + L +++ +K ++ +N + I L Sbjct: 1702 QHRVLIFAQHKALLDIIERDLFHSHMKNVTYLRLDGSVEPEKRFDIVKAFNSDPTIDALL 1761 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G GLNL + LVF W+ + + R + G K+ V V+ LI + Sbjct: 1762 LTTHVGGLGLNLTS-ADTLVFMEHDWNPMR-----DHQAMDRAHRLGQKKVVNVHRLIMR 1815 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKK 200 T++E V+ + K ++ + ++NA Sbjct: 1816 GTLEEKVMSLQKFKVSVANAVINAENA 1842 >gi|195166785|ref|XP_002024215.1| GL22908 [Drosophila persimilis] gi|194107570|gb|EDW29613.1| GL22908 [Drosophila persimilis] Length = 1898 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 73/226 (32%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS---------KTVKCLQLANGAVYYDEE--------KHW 48 Q++ Y + +N EA NS + + + N + Sbjct: 846 AMQKKFYKFILTKNYEALNSKTGGGSCSLINIMMDLKKCCNHPYLFPSAAEEAQTAAGGL 905 Query: 49 KEVHD-----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 E++ K+ L ++ + + +++ L L+ + + Sbjct: 906 YEINSLTKAAGKLVLLSKMLRQLKSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGG 965 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + + G G+NL + ++ + W+ + Sbjct: 966 ITGTVRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1019 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1020 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1065 >gi|151943040|gb|EDN61375.1| SNF2-like protein [Saccharomyces cerevisiae YJM789] Length = 1359 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 66/196 (33%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE------KIKALEVII------EKANAAPIIVAY 75 K ++ ++ N +DE + ++ ++ KA+ +++ + Sbjct: 755 KIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFF 814 Query: 76 H----------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 F ++ + +N + G GL Sbjct: 815 QMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGL 874 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K V + LI ++++E++L+R Sbjct: 875 NLQT-ADTVIIFDTDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 928 Query: 184 LRTKSTIQDLLLNALK 199 K I ++ A K Sbjct: 929 AMQKLDIDGKVIQAGK 944 >gi|121701385|ref|XP_001268957.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus clavatus NRRL 1] gi|119397100|gb|EAW07531.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus clavatus NRRL 1] Length = 892 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 76/221 (34%), Gaps = 28/221 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------KHWKEVHDEKI 56 + +R L + I + ++ N + K+ Sbjct: 593 EEIERANTIKLAKKEIAQKKLQNPVMQARLACNSPHNFYWPWGNEPAAIDETLVTASGKM 652 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE 103 L+ ++ I++ F + L LQ Q + I+ Sbjct: 653 LLLDRLVPCLLKKGHKILIFSQFKTQLDILQDWATQLRGWNCCRIDGAISQTDRQAQIKA 712 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + G G+NL + ++ F W+ ++ + R + G Sbjct: 713 FNSDSHFKIFLLSTRAGGQGINLVA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQT 766 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 767 RPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFKSL 807 >gi|312922352|ref|NP_001099924.2| transcription termination factor 2 [Rattus norvegicus] Length = 1142 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 69/238 (28%), Gaps = 67/238 (28%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-------------------------- 54 + S+ ++ Q KE+ E Sbjct: 892 STVHVLSQLLRLRQCCCHLSLLKSVLDPKELESEGLVLSLEEQLSALTLSKVDVSEPSPT 951 Query: 55 --------KIKALEVI---------------IEKANA-APIIVAYHFNSDLA-------- 82 K++ + I I+K ++ + S L Sbjct: 952 VSLNGTCFKVELFDDIRRSTKVSSLLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLRK 1011 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 1012 NRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1070 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q +RI + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1071 NPSLEDQACDRI-----YRVGQEKDVVMHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1123 >gi|225556696|gb|EEH04984.1| transcriptional accessory protein [Ajellomyces capsulatus G186AR] Length = 1984 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 77/250 (30%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQG-----ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 K + F ++ D+ + + +L N +E H + Sbjct: 1655 KLFEDFTKKEQKDIAKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKESHKQYDEIQKS 1714 Query: 52 ------------HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + +V Sbjct: 1715 LAAKNSHIRDVAHAPKLIALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQMKEM 1774 Query: 81 LARLQKAF-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L +Q K + ++N + +L + G GLNL Sbjct: 1775 LDIVQNDVLKKLLPSVQFLRLDGSVEATKRQSIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1834 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1835 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1888 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1889 KIDVASTVVN 1898 >gi|194382816|dbj|BAG64578.1| unnamed protein product [Homo sapiens] Length = 677 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 357 VQLYEDFAKSRAKCDVDETVSSATLSEETEKPKLKATGHVFQALQYLRKLCNHPALVLTP 416 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 417 QHPEFKTTAEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRIL 476 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 477 IFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLLTTHV 536 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 537 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 590 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 591 KIMGLQKFKMNIANTVIS 608 >gi|149030493|gb|EDL85530.1| transcription termination factor, RNA polymerase II (predicted), isoform CRA_b [Rattus norvegicus] Length = 1070 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 69/238 (28%), Gaps = 67/238 (28%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-------------------------- 54 + S+ ++ Q KE+ E Sbjct: 820 STVHVLSQLLRLRQCCCHLSLLKSVLDPKELESEGLVLSLEEQLSALTLSKVDVSEPSPT 879 Query: 55 --------KIKALEVI---------------IEKANA-APIIVAYHFNSDLA-------- 82 K++ + I I+K ++ + S L Sbjct: 880 VSLNGTCFKVELFDDIRRSTKVSSLLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLRK 939 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 940 NRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 998 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q +RI + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 999 NPSLEDQACDRI-----YRVGQEKDVVMHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1051 >gi|224052611|ref|XP_002191629.1| PREDICTED: BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) [Taeniopygia guttata] Length = 1844 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 68/223 (30%), Gaps = 53/223 (23%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----------------HDEKIKALEVII 63 + +L N +H + H K+ AL+ ++ Sbjct: 1558 STGHVFQALQYLRKLCNHPALVLTTQHPEYKRITEQLAAQNSSLRDIQHAPKLSALKQLL 1617 Query: 64 EKAN----------------AAPIIVAYHFNSDLARLQK-------------AFPQGRTL 94 +++ S L ++ Sbjct: 1618 LDCGLGNGGSSESGTEAVVAQHRVLIFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPA 1677 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + +N + I +L G GLNL G + +VF W+ + + Sbjct: 1678 GQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLT-GADTVVFVEHDWNPMR-----DLQAM 1731 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G KR V VY LI + T++E ++ + K I + +++ Sbjct: 1732 DRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVIS 1774 >gi|114631901|ref|XP_507937.2| PREDICTED: helicase, lymphoid-specific isoform 16 [Pan troglodytes] Length = 700 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 426 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 485 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 486 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 545 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 546 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 599 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 600 AKRKLEKLIIH 610 >gi|73946611|ref|XP_859774.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 4 [Canis familiaris] Length = 1556 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 961 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1020 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1021 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1080 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1081 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1136 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1185 >gi|326478381|gb|EGE02391.1| TATA-binding protein-associated factor MOT1 [Trichophyton equinum CBS 127.97] Length = 1912 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 K Q+++ + + EA + +L N +E H + Sbjct: 1592 QKEQKDIANKVGSSDKEAKEHIFQALQYMRRLCNSPALVMKEGHKQYHQVQKLLASKNSS 1651 Query: 52 -----HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLARLQKA 87 H K+ AL ++ + ++ L +Q Sbjct: 1652 IRDIAHAPKLSALRDLLIDCGIGVDPSAEGELATGASYVSPHRALIFCQMKEMLDIVQND 1711 Query: 88 F-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 K + ++N + +L + G GLNL G + ++ Sbjct: 1712 VLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVI 1770 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1771 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1825 Query: 194 LLN 196 ++N Sbjct: 1826 VVN 1828 >gi|326473865|gb|EGD97874.1| TBP associated factor Mot1 [Trichophyton tonsurans CBS 112818] Length = 1905 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 K Q+++ + + EA + +L N +E H + Sbjct: 1585 QKEQKDIANKVGSSDKEAKEHIFQALQYMRRLCNSPALVMKEGHKQYHQVQKLLASKNSS 1644 Query: 52 -----HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLARLQKA 87 H K+ AL ++ + ++ L +Q Sbjct: 1645 IRDIAHAPKLSALRDLLIDCGIGVDPSAEGELATGASYVSPHRALIFCQMKEMLDIVQND 1704 Query: 88 F-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 K + ++N + +L + G GLNL G + ++ Sbjct: 1705 VLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVI 1763 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1764 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1818 Query: 194 LLN 196 ++N Sbjct: 1819 VVN 1821 >gi|194224801|ref|XP_001490809.2| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Equus caballus] Length = 1548 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 935 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 994 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 995 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1054 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1055 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1110 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1111 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1159 >gi|115462049|ref|NP_001054624.1| Os05g0144300 [Oryza sativa Japonica Group] gi|53749343|gb|AAU90202.1| putative transcriptional regulator [Oryza sativa Japonica Group] gi|113578175|dbj|BAF16538.1| Os05g0144300 [Oryza sativa Japonica Group] Length = 1128 Score = 94.8 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 72/213 (33%), Gaps = 26/213 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----HDEKIKA 58 Y + L + +++ + N + E + + K + Sbjct: 693 YEQVTSNGRVSLGSGLKSKA-LQNLSMQLRKCCNHPYLFVEHYNMYQRQEIVRSSGKFEL 751 Query: 59 LEVIIEKAN--AAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWN- 105 L+ ++ K +++ ++ + ++N Sbjct: 752 LDRLLPKLQRAGHRVLLFSQMTKLLDILEVYLQMYQFKYMRLDGSTKTEERGRLLADFNK 811 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + L + G GLNLQ + ++ F W+ + +++ R + G K Sbjct: 812 KDSEYFLFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQKNE 865 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +I+E +L R + K I ++ A Sbjct: 866 VRVFVLVSVGSIEEEILDRAKQKMGIDAKVIQA 898 >gi|326912967|ref|XP_003202815.1| PREDICTED: transcription termination factor 2-like [Meleagris gallopavo] Length = 1176 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 34/243 (13%), Positives = 66/243 (27%), Gaps = 69/243 (28%) Query: 22 AFNSASKTVKCLQLANGAVYY--------------------------------------- 42 + S ++ Q Sbjct: 927 TAHVLSMLLRLRQCCCHLSLLKVALDKVNLTSEGLSLSIEEQLSALTLSELQTPDSKTTV 986 Query: 43 -----------DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA--------- 82 E + L+ I + +V + S L Sbjct: 987 YLNGTAFNTDLFEITKESTKVSHLLAELKTIQSHPESQKSVVVSQWTSMLKVVAVHLQRL 1046 Query: 83 -RLQKAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++E+N ++ + G GLNL GGN L + W Sbjct: 1047 GLKYSVVDGSVNPKQRMDVVEEFNNNPKGPQVMLVSLLAGGVGLNLT-GGNHLFLLDMHW 1105 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +Q +RI + G ++ V ++ + + T++E ++Q K + +L A K Sbjct: 1106 NPALEEQACDRI-----YRVGQQKDVVIHRFVCEGTVEEKIVQLQTKKKGLAQQVL-AGK 1159 Query: 200 KET 202 ET Sbjct: 1160 GET 1162 >gi|317143637|ref|XP_001819595.2| DNA repair protein rhp54 [Aspergillus oryzae RIB40] Length = 827 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 529 LKAIGLLKKLCNHPDLLNLSTDLPGCEFAFPEDYVPPEARGRDRDIKSWYSGKMMVLDRM 588 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K ++K + ++N Sbjct: 589 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDG 648 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 649 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 702 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 703 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 734 >gi|223462579|gb|AAI50807.1| Chromodomain helicase DNA binding protein 6 [Mus musculus] Length = 2711 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 70/237 (29%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + + L N + ++ + N + + Sbjct: 708 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSS 767 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 768 EASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 827 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 828 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 884 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 885 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKG 938 >gi|168016565|ref|XP_001760819.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162687828|gb|EDQ74208.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1644 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 70/182 (38%), Gaps = 22/182 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------ 90 + K++ L++++++ A +++ L L+ Sbjct: 1210 PPLQSFDFAKMLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYL 1269 Query: 91 -----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +D+ + I + + G G+NL + ++F+ W+ Sbjct: 1270 RLDGSSTIMDRRDMVNDFQHRSDIFVFLLSTRAGGLGINLTA-ADTVIFYESDWNPT--- 1325 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL---NALKKET 202 ++ + R + G + V VY LI T++E +++R K+T+Q L++ NA + + Sbjct: 1326 --MDLQAMDRAHRLGQTKEVTVYRLICTGTVEEKIMKRASQKNTVQQLVMTGNNASQGDV 1383 Query: 203 IH 204 + Sbjct: 1384 LE 1385 >gi|169612227|ref|XP_001799531.1| hypothetical protein SNOG_09232 [Phaeosphaeria nodorum SN15] gi|206557941|sp|Q0UG82|INO80_PHANO RecName: Full=Putative DNA helicase INO80 gi|160702459|gb|EAT83424.2| hypothetical protein SNOG_09232 [Phaeosphaeria nodorum SN15] Length = 1673 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ +++ KA +++ + + +++ + Sbjct: 1397 DSGKLARLDALLKGLKAGDHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1456 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1457 TVADFQSDPTIFVFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1510 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI TI+E + +R K +Q ++++ Sbjct: 1511 LGQTRQVTVYRLITSGTIEERIRKRALQKEEVQRVVISG 1549 >gi|149045437|gb|EDL98437.1| similar to RAD54B homolog isoform 1; RAD54, S. cerevisiae, homolog of, B (predicted), isoform CRA_b [Rattus norvegicus] Length = 819 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 72/248 (29%), Gaps = 55/248 (22%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 ++ Y K + + +L N KE + + + Sbjct: 467 IELYRKLLSSQSVRFCLQGLLGNSAHLICIGALKKLCNHPRLLFSFVKGKEFNSSRDENE 526 Query: 60 EVIIEK------------------------------------ANAAPIIVAYHFNSDLAR 83 E + + +I+ ++ L Sbjct: 527 ERSLCQGLLTVFPAGYNLLQLSESESGKLQVLVKLLAAISELRPTEKVILVSNYRQTLNL 586 Query: 84 LQKAFPQG----------RTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNI 131 L++ + + + +N + + G GLNL GG+ Sbjct: 587 LEEVCKCHGYACARLDGQTPVSQRQQIVDNFNSKYSTDFIFLLSSKAGGVGLNL-IGGSH 645 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + + R + G K V VY L+ TI+E + QR +K + Sbjct: 646 LILYDIDWNPAT-----DIQAMARVWRDGQKHPVHVYRLLTTGTIEEKIYQRQISKQGLS 700 Query: 192 DLLLNALK 199 +++ + Sbjct: 701 GAVVDLTR 708 >gi|119627334|gb|EAX06929.1| RAD54-like (S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 567 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 83/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L + + +S T +L N ++ +E Sbjct: 242 ELYKRFLRQAKPAEELLEGKMSVSSLSSITS-LKKLCNHPALIYDKCVEEEDGFVGALDL 300 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFP------ 89 K+ L+ I+ ++ +++ ++ L +K Sbjct: 301 FPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY 360 Query: 90 ----QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 361 VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 419 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 420 -----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 468 >gi|119570422|gb|EAW50037.1| helicase, lymphoid-specific, isoform CRA_l [Homo sapiens] Length = 714 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 440 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 499 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 500 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 559 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 560 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 613 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 614 AKRKLEKLIIH 624 >gi|323348194|gb|EGA82445.1| Sth1p [Saccharomyces cerevisiae Lalvin QA23] Length = 1359 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 66/196 (33%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE------KIKALEVII------EKANAAPIIVAY 75 K ++ ++ N +DE + ++ ++ KA+ +++ + Sbjct: 755 KIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFF 814 Query: 76 H----------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 F ++ + +N + G GL Sbjct: 815 QMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNXFNAPDSDYFCFLLSTRAGGLGL 874 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K V + LI ++++E++L+R Sbjct: 875 NLQT-ADTVIIFDTDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 928 Query: 184 LRTKSTIQDLLLNALK 199 K I ++ A K Sbjct: 929 AMQKLDIDGKVIQAGK 944 >gi|302666050|ref|XP_003024628.1| hypothetical protein TRV_01197 [Trichophyton verrucosum HKI 0517] gi|291188693|gb|EFE44017.1| hypothetical protein TRV_01197 [Trichophyton verrucosum HKI 0517] Length = 1911 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 K Q+++ + + EA + +L N +E H + Sbjct: 1591 QKEQKDIANKVGSSDKEAKEHIFQALQYMRRLCNSPALVMKEGHKQYHQVQKLLASKNSN 1650 Query: 52 -----HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLARLQKA 87 H K+ AL ++ + ++ L +Q Sbjct: 1651 IRDIAHAPKLSALRDLLIDCGIGVDPSAEGELATGASYVSPHRALIFCQMKEMLDIVQND 1710 Query: 88 F-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 K + ++N + +L + G GLNL G + ++ Sbjct: 1711 VLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVI 1769 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1770 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1824 Query: 194 LLN 196 ++N Sbjct: 1825 VVN 1827 >gi|301117486|ref|XP_002906471.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora infestans T30-4] gi|262107820|gb|EEY65872.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora infestans T30-4] Length = 2158 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 29/227 (12%), Positives = 70/227 (30%), Gaps = 38/227 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y + L + + ++ + N + + Sbjct: 1133 QYYRAIYDKNKSFLYRGTKNGLPTLNNIQLQLRKCCNHPFLIKGVEERELDELGSNPTPA 1192 Query: 53 ---------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 K+ + +I K + I++ F L L++ + + Sbjct: 1193 QVMEKTIECSGKMMLVSKLIPKLKRDGHKILIFSQFLKQLDLLERYCEANSFVFERLDGS 1252 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I ++ + + G G+NL + ++ F W+ M + Sbjct: 1253 TGGSVRQSAIDRFSRPHSKSFIFLLSTKAGGVGINL-IAADTVIIFDSDWNP-----MND 1306 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R + G K++V +Y L+ +NT + + R K ++ +L Sbjct: 1307 LQAQSRCHRIGQKKSVQIYRLVTRNTYESEMFDRASRKLGLEHAVLG 1353 >gi|224070615|ref|XP_002303179.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222840611|gb|EEE78158.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1682 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 69/170 (40%), Gaps = 19/170 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAF 88 Y ++ + K++ L +++ K + +++ L Sbjct: 660 LYFPDRRLIQFDCGKLQELAILLRKLKSEGHRVLIFTQMTKMLDILEAFINLYGYTYMRL 719 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + +Q +N KI + S G G+NL G + ++F+ W+ Sbjct: 720 DGSTQPEDRQTLMQRFNTNPKIFIFILSTRSGGVGINL-VGADTVIFYDSDWNPA----- 773 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ R + G R V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 774 MDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 823 >gi|126334594|ref|XP_001365802.1| PREDICTED: similar to BRM protein [Monodelphis domestica] Length = 1570 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 975 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1034 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1035 SGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1094 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1095 DGTTKSEDRAALLKKFNEPGSQFFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1150 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1151 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1199 >gi|61742812|ref|NP_775544.2| chromodomain helicase DNA binding protein 6 [Mus musculus] gi|126540714|emb|CAM46169.1| chromodomain helicase DNA binding protein 6 [Mus musculus] Length = 2711 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 70/237 (29%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + + L N + ++ + N + + Sbjct: 708 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSS 767 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 768 EASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 827 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 828 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 884 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 885 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKG 938 >gi|297687067|ref|XP_002821047.1| PREDICTED: LOW QUALITY PROTEIN: lymphoid-specific helicase-like [Pongo abelii] Length = 890 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 616 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 675 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 676 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 735 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 736 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 789 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 790 AKRKLEKLIIH 800 >gi|189521245|ref|XP_696641.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Danio rerio] Length = 2063 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 1009 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAAEAPKTPSGAYEGV 1068 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K ++V L L+ + Sbjct: 1069 GLTKASGKLMLLQKMLRKLKEQGHRVLVFSQMTKMLDLLEDFLDSEGYKYERIDGGITGA 1128 Query: 98 --PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ F W+ + Sbjct: 1129 LRQEAIDRFNAPGAVQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDIQAF 1182 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1183 SRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1224 >gi|166240364|ref|XP_638342.2| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|165988561|gb|EAL64859.2| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1604 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 77/219 (35%), Gaps = 30/219 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTV-------KCLQLANGAVYYDEEKHWKEV---H 52 Y + ++ E + K + ++ N + +E E Sbjct: 877 MYRSLVEYGVLPIDPDSKEGRSGRLKMKGFNNIVKQLQKICNHPYLFKDEWDINEDLIRT 936 Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCT 100 K ++ I+ K + +++ + +++ F ++ Sbjct: 937 SGKFDTMDQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERAHL 996 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + EWN P + + G G+NLQ + ++ F W+ + ++ R + Sbjct: 997 VVEWNRPDSPFWIFVLSTHAGGLGMNLQT-ADTVIIFDSDWNPQ-----MDLQAQDRCHR 1050 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G +V V+ LI+ N+I+E +L R K I ++ A Sbjct: 1051 IGQTNSVSVFRLISANSIEEKILGRATDKLEIDAKIIQA 1089 >gi|291383314|ref|XP_002708230.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2-like isoform 1 [Oryctolagus cuniculus] Length = 1595 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 982 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1041 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1042 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1101 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1102 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1157 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1158 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1206 >gi|254573876|ref|XP_002494047.1| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) [Pichia pastoris GS115] gi|238033846|emb|CAY71868.1| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) [Pichia pastoris GS115] Length = 728 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 68/181 (37%), Gaps = 17/181 (9%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------- 86 + E++ K + L I+++ A I+ F LA L+ Sbjct: 533 CSQCKSLSEQQTPPLERSAKSERLLEILKRDPARKTIIFSQFTKLLATLKPFLTKNGFKC 592 Query: 87 --AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +D + + +L GLNL N +V + WW+ + Sbjct: 593 VLYEGTMTRAMRDTTLKEFNENPETTVLLCSLKCGAIGLNLT-IANRVVIYDPWWNPQ-- 649 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +E + R + G + V VY LI +++++E +++ K + + +++ K+ + Sbjct: 650 ---VEDQAIDRVYRFGQTKEVDVYRLIIKDSVEENIVRLQEKKRQVAEAVVDIHGKKKVS 706 Query: 205 V 205 + Sbjct: 707 L 707 >gi|207344407|gb|EDZ71563.1| YIL126Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1358 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 66/196 (33%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE------KIKALEVII------EKANAAPIIVAY 75 K ++ ++ N +DE + ++ ++ KA+ +++ + Sbjct: 754 KIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFF 813 Query: 76 H----------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 F ++ + +N + G GL Sbjct: 814 QMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGL 873 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K V + LI ++++E++L+R Sbjct: 874 NLQT-ADTVIIFDTDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 927 Query: 184 LRTKSTIQDLLLNALK 199 K I ++ A K Sbjct: 928 AMQKLDIDGKVIQAGK 943 >gi|15230608|ref|NP_187252.1| ATCHR12; ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|6671969|gb|AAF23228.1|AC013454_15 putative transcriptional regulator [Arabidopsis thaliana] Length = 1132 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 79/214 (36%), Gaps = 26/214 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIK 57 Y + LQ + ++ + + T++ + N + + K + Sbjct: 687 YKQVTDMGRVGLQTGSGKSKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGKFE 746 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN 105 L+ ++ K I++ + D+ ++++N Sbjct: 747 LLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFN 806 Query: 106 EGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E P + G GLNLQ + ++ F W+ + +++ R + G K+ Sbjct: 807 EPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQKK 860 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +++E++L+R + K I ++ A Sbjct: 861 EVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQA 894 >gi|73946669|ref|XP_860771.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 32 [Canis familiaris] Length = 1586 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 961 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1020 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1021 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1080 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1081 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1136 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1185 >gi|328867898|gb|EGG16279.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1282 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 77/213 (36%), Gaps = 24/213 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQ-LANGAVYYD---EEKHWKEVHDEKIKA 58 +Y + + ++ ++ + T+K +Q + N + + K Sbjct: 592 EYGQLPIDPTSEMFKKSKTGMRGFNNTLKQMQKICNHPYLFLSEWDINEDLIRASGKFDM 651 Query: 59 LEVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN- 105 ++ I+ KA+ +++ + ++ + EWN Sbjct: 652 MDQILLKMKASGHRVLIFTQMTEVINLMGEYFSLKEWDYLRLDGSTKPEERSRLVVEWNR 711 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+NLQ + ++ F W+ + ++ R + G Sbjct: 712 KDSPFFIFVLSTHAGGLGMNLQT-ADTVIIFDSDWNPQ-----MDLQAQDRCHRVGQVNR 765 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI+ N+I+E +L+R K I ++ A Sbjct: 766 VNVFRLISANSIEEKILERATDKLEIDAKIIQA 798 >gi|297821893|ref|XP_002878829.1| PKL/SSL2 [Arabidopsis lyrata subsp. lyrata] gi|297324668|gb|EFH55088.1| PKL/SSL2 [Arabidopsis lyrata subsp. lyrata] Length = 1399 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 30/242 (12%), Positives = 73/242 (30%), Gaps = 45/242 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------- 54 + Y Y L + + + ++ ++ + + +E Sbjct: 533 EYYKAIFTRNYQVLTKKGGAQISLNNIMMELRKVCCHPYMLEGVEPAIHDANEAFKQLLE 592 Query: 55 -----KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-------------- 95 ++ ++ K +++ F L L+ Sbjct: 593 SCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCSYKFQHMLDLLEDYCSYKKWN 652 Query: 96 -----------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + I +N + G G+NL + ++ + W+ Sbjct: 653 YERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP- 710 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + R + G V +Y LI + TI+E ++Q + K ++ L++ LK + Sbjct: 711 ----HADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQN 766 Query: 203 IH 204 I+ Sbjct: 767 IN 768 >gi|114631903|ref|XP_001150736.1| PREDICTED: helicase, lymphoid-specific isoform 2 [Pan troglodytes] Length = 714 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 440 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 499 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 500 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 559 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 560 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 613 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 614 AKRKLEKLIIH 624 >gi|73946661|ref|XP_860636.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 28 [Canis familiaris] Length = 1549 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 954 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1013 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1014 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1073 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1074 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1129 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1130 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1178 >gi|254586715|ref|XP_002498925.1| ZYRO0G21780p [Zygosaccharomyces rouxii] gi|238941819|emb|CAR29992.1| ZYRO0G21780p [Zygosaccharomyces rouxii] Length = 1094 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 80/223 (35%), Gaps = 39/223 (17%) Query: 7 FQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEKH 47 Q+ Y + ++++A N+ + ++ + N + Sbjct: 377 MQKTWYKQILEKDLDAVNASGGQKESKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDE 436 Query: 48 WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLD 95 + K+K L+ ++ K + +++ + L L+ + Sbjct: 437 HLVYNSAKLKVLDKLLRKMKEQGSRVLIFSQMSRLLDILEDYCFLREYDYCRIDGSTDHE 496 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +I E+N L + G G+NL +++V + W+ + + + Sbjct: 497 DRIRSIDEYNRPDSNKFLFLLTTRAGGLGINLTS-ADVVVLYDSDWNPQA-----DLQAM 550 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V V+ + N++++ +L+R K + L++ Sbjct: 551 DRAHRIGQKKQVKVFRFVTDNSVEDKILERATQKLRLDQLVIQ 593 >gi|195161920|ref|XP_002021804.1| GL26702 [Drosophila persimilis] gi|194103604|gb|EDW25647.1| GL26702 [Drosophila persimilis] Length = 1943 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 71/225 (31%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------EEKH 47 KQY+K + +G+ + ++ + N A E Sbjct: 803 KQYYKWILTKNFDALRKGKKGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQ 862 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L + + Sbjct: 863 TLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGE 922 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 923 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 976 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 977 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 1021 >gi|325087704|gb|EGC41014.1| TBP associated factor [Ajellomyces capsulatus H88] Length = 1756 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 77/250 (30%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQG-----ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 K + F ++ D+ + + +L N +E H + Sbjct: 1427 KLFEDFTKKEQKDITKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKESHKQYDEIQKS 1486 Query: 52 ------------HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + +V Sbjct: 1487 LAAKNSHIRDVAHAPKLIALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQMKEM 1546 Query: 81 LARLQKAF-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L +Q K + ++N + +L + G GLNL Sbjct: 1547 LDIVQNDVLKKLLPSVQFLRLDGSVEATKRQSIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1606 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1607 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1660 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1661 KIDVASTVVN 1670 >gi|315055153|ref|XP_003176951.1| TATA-binding protein-associated factor MOT1 [Arthroderma gypseum CBS 118893] gi|311338797|gb|EFQ97999.1| TATA-binding protein-associated factor MOT1 [Arthroderma gypseum CBS 118893] Length = 1906 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 K Q+++ + + EA + +L N +E H + Sbjct: 1586 QKEQKDIANKVGSSDKEAKEHIFQALQYMRRLCNSPALVMKEGHKQYHQVQKLLASKNSS 1645 Query: 52 -----HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLARLQKA 87 H K+ AL ++ + ++ L +Q Sbjct: 1646 IRDIAHAPKLSALRDLLIDCGIGVDPSAEGELATGASYVSPHRALIFCQMKEMLDIVQND 1705 Query: 88 F-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 K + ++N + +L + G GLNL G + ++ Sbjct: 1706 VLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVI 1764 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1765 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1819 Query: 194 LLN 196 ++N Sbjct: 1820 VVN 1822 >gi|225436589|ref|XP_002275100.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1764 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 74/231 (32%), Gaps = 36/231 (15%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + DL + + V+ + N ++ H Sbjct: 866 QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGNRSTNDCGK 925 Query: 51 -----VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 + K+ L+ ++EK + +++ L L + + Sbjct: 926 LERLILSSGKLVLLDKLLEKLHETNHRVLIFSQMVRMLDILAEYMSLRGFQFQRLDGSTK 985 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +N + G G+NL + ++ F W+ + + Sbjct: 986 AELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQ 1039 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1040 AMSRAHRIGQREVVNIYRFVTSKSVEENILKRAKQKMVLDHLVIQKLNAEG 1090 >gi|34328020|dbj|BAB13390.3| KIAA1564 protein [Homo sapiens] Length = 2432 Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 910 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 969 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 970 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1029 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1030 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1086 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1087 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1139 >gi|296418119|ref|XP_002838689.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634650|emb|CAZ82880.1| unnamed protein product [Tuber melanosporum] Length = 404 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 76/248 (30%), Gaps = 59/248 (23%) Query: 3 QYHKFQRE-LYCDL-----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y + + D+ G + + ++ ++ N ++ + + Sbjct: 32 LYKGLRDKISIMDIIEKAASGADENNATLMNLVMQFRKVCNHPDLFERAETSSPIDLGLY 91 Query: 53 ------------------------------DEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 K+ L+ ++ + +++ + Sbjct: 92 PIPKILPEPSSEKMGYAHIKVPSMRRFVSDSGKLAKLDALLTELKAGGHRVLLYFQMTKM 151 Query: 81 L-----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 + R + + D+ +I + + G G+NL Sbjct: 152 MDLCEEYLTYRHHRYLRLDGSSKLEDRRDMVSAWQTTPEIFVFILSTRAGGLGINLTA-A 210 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F+ W+ I+ + R + G R V VY LI + TI+E + R + K Sbjct: 211 DTVIFYDSDWNPT-----IDSQAMDRAHRLGQTRQVTVYRLITRGTIEERIRTRAKQKEE 265 Query: 190 IQDLLLNA 197 +Q +++ Sbjct: 266 VQRVVIQG 273 >gi|302508605|ref|XP_003016263.1| hypothetical protein ARB_05661 [Arthroderma benhamiae CBS 112371] gi|291179832|gb|EFE35618.1| hypothetical protein ARB_05661 [Arthroderma benhamiae CBS 112371] Length = 1904 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 K Q+++ + + EA + +L N +E H + Sbjct: 1584 QKEQKDIANKVGSSDKEAKEHIFQALQYMRRLCNSPALVMKEGHKQYHQVQKLLASKNSN 1643 Query: 52 -----HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLARLQKA 87 H K+ AL ++ + ++ L +Q Sbjct: 1644 IRDIAHAPKLSALRDLLIDCGIGVDPSAEGELATGASYVSPHRALIFCQMKEMLDIVQND 1703 Query: 88 F-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 K + ++N + +L + G GLNL G + ++ Sbjct: 1704 VLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVI 1762 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1763 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1817 Query: 194 LLN 196 ++N Sbjct: 1818 VVN 1820 >gi|281340559|gb|EFB16143.1| hypothetical protein PANDA_017702 [Ailuropoda melanoleuca] Length = 2448 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 924 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 983 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 984 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 1043 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 1044 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 1100 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 1101 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1153 >gi|308497953|ref|XP_003111163.1| CRE-TAG-192 protein [Caenorhabditis remanei] gi|308240711|gb|EFO84663.1| CRE-TAG-192 protein [Caenorhabditis remanei] Length = 2998 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 72/242 (29%), Gaps = 45/242 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 K Y + L A + + ++ + N + + Sbjct: 1463 KFYRAILERNFSHLCKGT-SAPSLMNVMMELRKCCNHPFLINGAEETIMNDFRLAHPDWD 1521 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K+ +E ++ K + +++ L L++ + Sbjct: 1522 DETLAQKALVQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLITMSYPFERI 1581 Query: 98 ---------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + ++ F W+ + Sbjct: 1582 DGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN--- 1637 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKETI 203 + R + G K+ V VY LI NT + + + K + +L ALK E Sbjct: 1638 --DLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQSTTALKAEGT 1695 Query: 204 HV 205 + Sbjct: 1696 AL 1697 >gi|225681199|gb|EEH19483.1| DNA repair protein RAD5 [Paracoccidioides brasiliensis Pb03] Length = 1083 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 61/167 (36%), Gaps = 18/167 (10%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQK-----------AFPQ 90 DE + + KI+ L I++K + IV F S L +++ Sbjct: 825 DEPETPDHLASTKIRHLMKILKKESGDYKFIVFSFFTSMLTKIEPFLKGANIGYARYDGA 884 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 R ++ + N K +L + GLNL + +V +W+ +E Sbjct: 885 MRNDMRENSLDRLRNSPKTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEE 938 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + V VY L +NT++E ++ K + + + Sbjct: 939 QAIDRVHRLNQTIDVKVYKLTIRNTVEERIVDLQEHKRELANATIEG 985 Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 10/86 (11%), Positives = 25/86 (29%), Gaps = 16/86 (18%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGA------------VYYDEEKH 47 Y + + + L + G +I ++ ++ Q N V Sbjct: 569 YSRLEQRTDKTLERMIGGNSINYASALVLLLRLRQACNHPDLVKSDLAQDKDVLTGNFGG 628 Query: 48 WKEVHDEKIKALEVIIEKANAAPIIV 73 + + K + ++ I +I Sbjct: 629 SQSKNSVKEEDVDDIANLMGGLSVIT 654 >gi|149733277|ref|XP_001502820.1| PREDICTED: chromodomain helicase DNA binding protein 6 [Equus caballus] Length = 2717 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 707 KYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 766 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 767 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 826 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 827 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 883 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 884 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 937 >gi|328865462|gb|EGG13848.1| myb domain-containing protein [Dictyostelium fasciculatum] Length = 1157 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 76/226 (33%), Gaps = 39/226 (17%) Query: 7 FQRELYCDLQGENIEAFNS------------ASKTVKCLQLANGAVYY-------DEEKH 47 QRE Y L ++ EA + + ++ + N + Sbjct: 457 MQREWYKSLLTKDFEALHGIGVKGGSGKVKLLNICMQLRKACNHPYLFDGAEEQPYTTGE 516 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 + K+ L+ ++ K + +++ L L+ G + Sbjct: 517 HIIDNSGKMVMLDRLLARLKQRGSRVLIFSQMARMLDILEDYMMYRDYKYCRIDGGTDSE 576 Query: 96 KDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I+ +N L + G G+ L +I+V F W+ + ++ Sbjct: 577 SRENNIETFNAPGSELFAFLLTTRAGGLGITL-NTADIVVLFDSDWNPQ-----VDLQAQ 630 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY + +++++E ++++ K + ++ + Sbjct: 631 DRAHRIGQTKPVTVYRFVTESSMEEKMVEKAEMKLHLDAAVIQQGR 676 >gi|320164356|gb|EFW41255.1| DNA helicase [Capsaspora owczarzaki ATCC 30864] Length = 1777 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDP 98 K+ L+ ++ K A +++ L R + Q ++ Sbjct: 1464 DSIKMVVLDKLLTKLKAEGHRVLIYSQMTKMIDLLEEFMNFRLHRYVRLDGQTTIETRNN 1523 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + + G G+NL + ++F+ W+ +++ + R + Sbjct: 1524 MVSNFQTRSDIFVFLLSTRAGGVGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRSHR 1577 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY LIA+ T++E +L R R KS I +++ Sbjct: 1578 LGQTRQVTVYRLIAKGTVEERILARARQKSEIHKMVI 1614 >gi|330922223|ref|XP_003299753.1| hypothetical protein PTT_10809 [Pyrenophora teres f. teres 0-1] gi|311326467|gb|EFQ92163.1| hypothetical protein PTT_10809 [Pyrenophora teres f. teres 0-1] Length = 1302 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 61/201 (30%), Gaps = 33/201 (16%) Query: 26 ASKTVKCLQLANGAVYY-------DEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAY 75 + ++ + + K LE +++ I++ Sbjct: 624 MNLVMQLRKCCSHPYQLPGVAPDPYYLGDHIIRASGKFILLEKLLKHTVFAQGKKILIFS 683 Query: 76 HFNSDLAR---------------LQKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPAS 118 F L + + I+ +N+ ++ + Sbjct: 684 SFTRTLDHCEDLLSLISNHGERFKSLRLDGSTSRARRNLDIRLFNQKGSDYKVMLLSTRA 743 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL ++F W+ + R + G + V +Y L Q T++E Sbjct: 744 GGLGINLTS-AEDVIFLDEDWNPQITL-----QAEARAHRIGQTKKVTIYKLCTQGTVEE 797 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 ++ R+R K + + +++ Sbjct: 798 QMMGRIRKKLYLSAKITESMQ 818 >gi|148674355|gb|EDL06302.1| chromodomain helicase DNA binding protein 6 [Mus musculus] Length = 2695 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 70/237 (29%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + + L N + ++ + N + + Sbjct: 705 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSS 764 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 765 EASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 824 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 825 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 881 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 882 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKG 935 >gi|281349310|gb|EFB24894.1| hypothetical protein PANDA_007733 [Ailuropoda melanoleuca] Length = 1561 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 952 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1011 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1012 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1071 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1072 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1127 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1128 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1176 >gi|158295468|ref|XP_001688808.1| AGAP006165-PB [Anopheles gambiae str. PEST] gi|157016052|gb|EDO63814.1| AGAP006165-PB [Anopheles gambiae str. PEST] Length = 2856 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 73/197 (37%), Gaps = 35/197 (17%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPI 71 L I A ++ + +Q G K++ L+ +++K + + Sbjct: 1703 QLLHPIISAMSTQFPDPRLIQYDCG----------------KLQTLDRLLKKLKSEGHRV 1746 Query: 72 IVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGK-IPLLFAHPASCG 120 ++ L L+ + + ++ +N + + S G Sbjct: 1747 LIFTQMTRMLDVLEAFLNYHGHIYLRLDGTTKVEQRQVLMERFNNDRRMFAFILSTRSGG 1806 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL G + ++F+ W+ ++ R + G R V +Y L+++ TI+E + Sbjct: 1807 VGINLT-GADTVIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTIEENI 1860 Query: 181 LQRLRTKSTIQDLLLNA 197 L++ K + DL + Sbjct: 1861 LKKANQKRILGDLAIEG 1877 >gi|158295466|ref|XP_316223.4| AGAP006165-PA [Anopheles gambiae str. PEST] gi|157016051|gb|EAA11849.4| AGAP006165-PA [Anopheles gambiae str. PEST] Length = 3418 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 73/197 (37%), Gaps = 35/197 (17%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPI 71 L I A ++ + +Q G K++ L+ +++K + + Sbjct: 1703 QLLHPIISAMSTQFPDPRLIQYDCG----------------KLQTLDRLLKKLKSEGHRV 1746 Query: 72 IVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGK-IPLLFAHPASCG 120 ++ L L+ + + ++ +N + + S G Sbjct: 1747 LIFTQMTRMLDVLEAFLNYHGHIYLRLDGTTKVEQRQVLMERFNNDRRMFAFILSTRSGG 1806 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL G + ++F+ W+ ++ R + G R V +Y L+++ TI+E + Sbjct: 1807 VGINLT-GADTVIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTIEENI 1860 Query: 181 LQRLRTKSTIQDLLLNA 197 L++ K + DL + Sbjct: 1861 LKKANQKRILGDLAIEG 1877 >gi|47211690|emb|CAF91815.1| unnamed protein product [Tetraodon nigroviridis] Length = 1369 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEKH 47 K Y + + L + + + + N + + Sbjct: 825 KYYKFILTKNFEALNTKGGGNQVSLLNVVMDLKKCCNHPYLFPTAAIEAPKMPNGMYDGS 884 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L+ + Sbjct: 885 ALTKASGKLLLLQKMMRRLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGITGG 944 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 945 MRQEAIDRFNAPGAQQFAFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 998 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G R V +Y + + +++E + Q + K + L++ Sbjct: 999 SRAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMMLTHLVV 1040 >gi|253748230|gb|EET02490.1| DNA repair and recombination protein Rhp26p [Giardia intestinalis ATCC 50581] Length = 930 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 69/225 (30%), Gaps = 36/225 (16%) Query: 2 KQYHKFQ--RELYCDLQG--------ENIEAFNSASKTVKCLQLANGAVYYDEEKHW--- 48 + Y + E L+ A + +K ++ + + D Sbjct: 476 QLYLQLLSSDEAIIKLKQLSATSRTFGEGIAKLTMAKLIQLQHICDHPSLLDTTGTDAPE 535 Query: 49 KEVHDEKIKALEV---IIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGR 92 + K+ L + + I+V L+ ++K Sbjct: 536 LQESSCKLTYLMEKLTELWNQSHDKILVFCQGRMMLSIVEKAFLEHSFFRDSYLRMDGHV 595 Query: 93 TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D P I ++ + I L G GLNL N + + W+ I+ Sbjct: 596 PVDARPALISQFSTDPHIRLFLLTTRVGGLGLNLTA-ANHVFLLNPNWNPT-----IDDQ 649 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V R + + V VY + TI+E + R K + +L+ Sbjct: 650 SVERCWRITQTKRVTVYKIFTGGTIEEKIFNRQIYKRLLVSRVLD 694 >gi|198473015|ref|XP_001356144.2| GA17649 [Drosophila pseudoobscura pseudoobscura] gi|198139261|gb|EAL33204.2| GA17649 [Drosophila pseudoobscura pseudoobscura] Length = 1943 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 71/225 (31%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------EEKH 47 KQY+K + +G+ + ++ + N A E Sbjct: 803 KQYYKWILTKNFDALRKGKKGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQ 862 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L + + Sbjct: 863 TLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGE 922 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 923 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 976 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 977 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 1021 >gi|168066598|ref|XP_001785222.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162663184|gb|EDQ49963.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1727 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 11/168 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + LQ G + + + K + +I + V F + Sbjct: 1020 RLLQFDCGKLQ----ELAVLLRRLKSQGHRALIFTQMTKMLDVLESFINLYGYTYMRLDG 1075 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ +Q +N KI L S G G+NL G + ++F+ W+ ++ Sbjct: 1076 STKPEQRQILMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPA-----MD 1129 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 1130 LQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRILDDLVIQS 1177 >gi|134116877|ref|XP_772665.1| hypothetical protein CNBK0390 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255283|gb|EAL18018.1| hypothetical protein CNBK0390 [Cryptococcus neoformans var. neoformans B-3501A] Length = 926 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 75/219 (34%), Gaps = 34/219 (15%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKA 58 RE +++ + ++ ++++ +D K+ Sbjct: 592 REWALKQATKHVNNMRLQNLVMQLRKISSHPYLFDWPSDPATGELVVDDNLVNASGKMLL 651 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWN 105 L +++ +++ F + L + + E+N Sbjct: 652 LNRLLDALFQKGHRVLLFSQFTTMLDVIEDWATVYKGWKVCRIDGSTPQESRRDQMDEFN 711 Query: 106 EGK-----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 GK L + G G+NL + ++FF W+ + ++ R + G Sbjct: 712 GGKDDPNACKLFLLSTRAGGLGINLVS-ADTVIFFDQDWNPQ-----MDLQAQDRAHRIG 765 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V V+ L++ +TI+ +L + K ++ L+++ K Sbjct: 766 QTKPVLVFRLVSAHTIESKILAKAGNKRKLEALVISQGK 804 >gi|156052200|ref|XP_001592061.1| hypothetical protein SS1G_07509 [Sclerotinia sclerotiorum 1980] gi|206557750|sp|A7EQA8|INO80_SCLS1 RecName: Full=Putative DNA helicase INO80 gi|154705285|gb|EDO05024.1| hypothetical protein SS1G_07509 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1707 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 58/157 (36%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ K +++ + + +++ + Sbjct: 1420 DSGKLAKLDSLLTKLKEGGHRVLLYFQMTRMIDLMEEYLTYRNYKYLRLDGSTKLEDRRD 1479 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1480 TVHDFQTRPEIFIFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1533 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY +I + TI+E + +R K +Q +++ Sbjct: 1534 LGQTRQVTVYRMITRGTIEERIRKRALQKEEVQKVVM 1570 >gi|71034023|ref|XP_766653.1| ATP-dependent helicase [Theileria parva strain Muguga] gi|68353610|gb|EAN34370.1| ATP-dependent helicase, putative [Theileria parva] Length = 1632 Score = 94.4 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 17/161 (10%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKA-FPQGRTLDK---------DPCTIQEW 104 K+ ++ K+ I+ F+ L L+ G T + I + Sbjct: 1317 KVLGPLLLKLKSEEHRCIIYTQFSKMLDILENWINFMGFTYIRLDGSTKIDMRQKIINRF 1376 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N KI L + + G G+ L G + ++F+ W+ I+R + R + G + Sbjct: 1377 NENTKIFLFISSTRTGGVGITLT-GADTVIFYDTDWNPA-----IDRQAMDRCHRIGQTK 1430 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V VY LI ++T++E + ++ K + DL+++ + + H Sbjct: 1431 DVNVYRLITEHTVEENIWRKQLQKRKLDDLIVDQGQFDIQH 1471 >gi|242790191|ref|XP_002481516.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC 10500] gi|218718104|gb|EED17524.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC 10500] Length = 808 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 67/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 510 LKAIGLLKKLCNHPDLLDLSRDLPGCEQYFPDDYVPPDGRGRDRDIKSWYSGKMMVLDRM 569 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K ++K + ++N+ Sbjct: 570 LARIRQDTNDKIVLISNYTQTLDLFEKLCRARAYGCLRLDGTMNVNKRQKLVDKFNDPNG 629 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 630 EEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 683 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 684 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 715 >gi|295673658|ref|XP_002797375.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb01] gi|226282747|gb|EEH38313.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb01] Length = 1084 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 18/168 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQGRTLD----- 95 DE + + KI+ L I++K + IV F S L +++ Sbjct: 826 DDEPETPDHLASTKIRHLMKILKKESGDYKFIVFSFFTSMLTKIEPFLKSANIGYARYDG 885 Query: 96 ------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ + N K +L + GLNL + +V +W+ +E Sbjct: 886 AMRNDLRENSLDRLRNSPKTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVE 939 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + V +Y L +NT++E ++ K + + + Sbjct: 940 EQAIDRVHRLNQTIDVKIYKLTVRNTVEERIVDLQERKRELANATIEG 987 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 10/86 (11%), Positives = 25/86 (29%), Gaps = 16/86 (18%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGA------------VYYDEEKH 47 Y + + + L + G +I ++ ++ Q N V Sbjct: 565 YSRLEQRTDKTLERMIGGNSINYASALVLLLRLRQACNHPDLVKSDLAQDKDVLTGNFGG 624 Query: 48 WKEVHDEKIKALEVIIEKANAAPIIV 73 + + K + ++ I +I Sbjct: 625 SQSKNSVKEEDVDDIANLMGGLSVIT 650 >gi|320461545|ref|NP_001189381.1| chromodomain-helicase-DNA-binding protein 8 [Danio rerio] Length = 2549 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 70/234 (29%), Gaps = 43/234 (18%) Query: 2 KQYHKFQRELYCDLQGE---NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------- 51 K Y + L N N + ++ + N + Sbjct: 1133 KYYRAILERNFSFLSMGATQNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYD 1192 Query: 52 -------------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 K+ L+ ++ KA +++ L L+ R L + Sbjct: 1193 PLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 1252 Query: 97 D----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I +++ + + G G+NL + V F W+ + Sbjct: 1253 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCVIFDSDWNPQN- 1310 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + R + G +AV VY LI +N+ + +L + K + +L ++ Sbjct: 1311 ----DLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSM 1360 >gi|109014585|ref|XP_001112974.1| PREDICTED: transcription termination factor 2-like isoform 1 [Macaca mulatta] Length = 1170 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 29/238 (12%), Positives = 65/238 (27%), Gaps = 67/238 (28%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------------------- 52 + S+ ++ Q E+ Sbjct: 920 STVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSALTLSELRDSEPSST 979 Query: 53 ----------------------DEKIKALEVIIEKANAAPIIVAYHFNSDLA-------- 82 + LE I + + ++ + + L Sbjct: 980 VSLNGTFFKTELFEDTRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKK 1039 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 1040 HGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1098 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q +RI + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1099 NPSLEDQACDRI-----YRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1151 >gi|109014588|ref|XP_001112999.1| PREDICTED: transcription termination factor 2-like isoform 2 [Macaca mulatta] Length = 1163 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 29/238 (12%), Positives = 65/238 (27%), Gaps = 67/238 (28%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------------------- 52 + S+ ++ Q E+ Sbjct: 913 STVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSALTLSELRDSEPSST 972 Query: 53 ----------------------DEKIKALEVIIEKANAAPIIVAYHFNSDLA-------- 82 + LE I + + ++ + + L Sbjct: 973 VSLNGTFFKTELFEDTRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKK 1032 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 1033 HGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1091 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q +RI + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1092 NPSLEDQACDRI-----YRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1144 >gi|300120100|emb|CBK19654.2| unnamed protein product [Blastocystis hominis] Length = 1570 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 70/236 (29%), Gaps = 41/236 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---------- 51 K Y + E+ + + ++ + N + + Sbjct: 315 KFYRAVYDRNTSVIGNESKNLPSLINIMMEIRKCCNHPYLIRGAESSIMLEIRTPASDWK 374 Query: 52 -----------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA----------F 88 K+ L+ ++ ++ +++ L +Q Sbjct: 375 GEELVLQALLTSSGKMVLLDKLLPKLQSQGHRVLLFSQMTHMLDIIQDYLTLKGYLFERI 434 Query: 89 PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G + I+ ++ + + G G+NL + ++ + W+ + Sbjct: 435 DGGVKSNDRQAAIERFSAPGSDRFIFLICTRAGGVGINLTA-ADTVIIYDSDWNPQN--- 490 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI T + + QR K + +LN L + Sbjct: 491 --DIQAQARCHRIGQDKAVKVYRLITNRTYEMEMFQRANLKLGLDKAVLNPLNQNV 544 >gi|195346399|ref|XP_002039753.1| GM15831 [Drosophila sechellia] gi|194135102|gb|EDW56618.1| GM15831 [Drosophila sechellia] Length = 2550 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 71/198 (35%), Gaps = 35/198 (17%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAP 70 L I A + + +Q G K++ ++ ++ + N Sbjct: 1640 LALLHPIISAMTTKFPDPRLIQYDCG----------------KLQTMDRLLRQLKVNGHR 1683 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASC 119 +++ L L+ + + ++ +N + +I S Sbjct: 1684 VLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSG 1743 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G + ++F+ W+ ++ R + G R V +Y L+++ TI+ Sbjct: 1744 GVGINLT-GADTVIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEVN 1797 Query: 180 VLQRLRTKSTIQDLLLNA 197 +L++ K + D+ + Sbjct: 1798 ILKKANQKRMLSDMAIEG 1815 >gi|109090014|ref|XP_001095376.1| PREDICTED: lymphoid-specific helicase isoform 10 [Macaca mulatta] Length = 739 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 465 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 524 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 525 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNMDPEVFIFLVSTRAGGLGINL 584 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NT+D+ +++R Sbjct: 585 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTVDQKIVERAA 638 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 639 AKRKLEKLIIH 649 >gi|328786874|ref|XP_393832.4| PREDICTED: putative DNA helicase Ino80-like [Apis mellifera] Length = 1636 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCT 100 K+ L+ ++ K +++ + L++ + D+ Sbjct: 1099 GKLSVLDSLLRRLKEQGHRVLIYSQMTKMIDLLEEYMYHKKHTFMRLDGSSKISDRRDMV 1158 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + + G G+NL + ++F+ W+ +++ + R + G Sbjct: 1159 ADFQKRADIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHRLG 1212 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1213 QTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 1249 >gi|294891224|ref|XP_002773482.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] gi|239878635|gb|EER05298.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] Length = 994 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 68/222 (30%), Gaps = 35/222 (15%) Query: 4 YHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYY-----DEEKHWKEVH----- 52 Y L G + + V+ + N E + Sbjct: 533 YRAIFERNKTYLSGAQKSGGPSLINLEVQLRKCCNHPFTIDGVEERELAMCQNKDQEFNR 592 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K + +++ F S L +Q+ + Sbjct: 593 MIMASGKMVLLDKLLPKLHAEGHKVLLFSQFLSMLDLIQRYALYRGYSVERLDGSATAKA 652 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + L + G G+NL ++++ F W+ + ++ Sbjct: 653 REEAIDRFNTPESSAFLFLLSTRAGGIGINLTA-ADVVIIFDSDWNPQ-----MDIQATA 706 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + V VY L+ T + + +R K I + + Sbjct: 707 RAHRIGQTKDVKVYRLVTNRTYEAQMFERASQKLGINEAVFQ 748 >gi|242010572|ref|XP_002426039.1| DNA repair and recombination protein RAD26, putative [Pediculus humanus corporis] gi|212510049|gb|EEB13301.1| DNA repair and recombination protein RAD26, putative [Pediculus humanus corporis] Length = 1206 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 59/204 (28%), Gaps = 33/204 (16%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHD----------------EKIKALEVII--EKAN 67 + ++ N Y ++ D K+ +E ++ K Sbjct: 629 FVGLINLRKICNHPHLYSGGPKHVKLDDLEFIPEENKFGYWKKAGKMIVMETLLKIWKKQ 688 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIPLLFAHPA 117 +++ L+ L+ I ++NE K +F Sbjct: 689 GHRVLIFTQSRKMLSILENFVLSQNYEYLKLDGTTNIGSRQPLINKFNEEKKYYIFLSTT 748 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G N +V + W+ R + G + V +Y L+ TI+ Sbjct: 749 HVGGLGVNLTGANRVVIYDPDWNPATDM-----QARERAWRIGQENQVTIYRLVTSGTIE 803 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E + R K + + +L + Sbjct: 804 EKIYHRQIFKQFLTNKVLKDPSQR 827 >gi|325117906|emb|CBZ53457.1| hypothetical protein NCLIV_032440 [Neospora caninum Liverpool] Length = 713 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 76/237 (32%), Gaps = 48/237 (20%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI----- 62 ++ + +G++ S ++L N + + ++ K + Sbjct: 284 RKIFAAEAEGKSGFTGRVLSSIQGLMKLCNHPSLVKSQAQMLQGFEKCEKYFSELDLEGQ 343 Query: 63 ------------------------IEKANAAPIIVAYHFNSDLARL-QKAFPQGRTLDK- 96 I I++ ++ L + G + + Sbjct: 344 KARSRLVRPEISGKLLLLARLLDVIRTTTNDKIVLISNYTQTLDLFDRMCRDCGYPVMRL 403 Query: 97 --------DPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I ++N+ P + + G G+NL G N LV F W+ Sbjct: 404 DGQTSIKKRHAMITKFNDPMNPQSFVFLLSSKAGGCGVNL-IGANRLVLFDPDWNPAN-- 460 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++ + R + G K+ ++Y + TI+E + QR K + +L++ + + Sbjct: 461 ---DKQALARVWRDGQKKPCYIYRFFSTGTIEEKIYQRQICKDGLSAMLVSDGENQI 514 >gi|254567481|ref|XP_002490851.1| DNA-dependent ATPase [Pichia pastoris GS115] gi|238030647|emb|CAY68571.1| DNA-dependent ATPase [Pichia pastoris GS115] gi|328351234|emb|CCA37634.1| DNA repair and recombination protein RAD54B [Pichia pastoris CBS 7435] Length = 840 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 77/217 (35%), Gaps = 29/217 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-ASKTVKCLQLANGAVYYDEEKHW------KEVHDE 54 + Y L I N K + ++ N +E + + Sbjct: 482 ELYKDIIETNQAKL--GLINDRNFFLQKILILRKICNSPSLLKDEPDFARYNLGNRFNSG 539 Query: 55 KIKALEVII---EKANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQE 103 KIK +++ + ++ +F L LQ K + +++ Sbjct: 540 KIKLTVLLLRKLFETTNEKCVIVSNFTKTLDVLQLIIEHNNWKYHRLDGSSKGRDKIVRD 599 Query: 104 WNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +NE ++ + G GLNL G + L+ F W+ ++ + R + G Sbjct: 600 FNESPQKDRFIMLLSSKAGGVGLNL-IGASRLILFDNDWNPS-----VDIQAMARVHRDG 653 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 KR F+Y L + TIDE +LQR K + D L+ Sbjct: 654 QKRHTFIYRLYTKGTIDEKILQRQLMKQNLSDKFLDD 690 >gi|6822074|emb|CAB71002.1| TATA box binding protein (TBP) associated factor (TAF)-like protein [Arabidopsis thaliana] Length = 2049 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 83/276 (30%), Gaps = 75/276 (27%) Query: 1 MKQYHKFQ----RELYCDLQGENIEA-------------FNSASKTVKCLQLANGAVYYD 43 +K Y +F ++ + + A + L+L + + Sbjct: 1702 LKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVL 1761 Query: 44 EEKHWKEV----------------------HDEKIKALEVIIEKAN-------------- 67 +K + V H K+ AL+ I+E+ Sbjct: 1762 GDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVALQEILEECGIGSDASSSDGTLSV 1821 Query: 68 -AAPIIVAYHFN-------------SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 +++ + +K ++ +N + I +L Sbjct: 1822 GQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVL 1881 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE------RIGVTRQRQAGFKRAVF 166 G GLNL + LVF W+ Q + R + G KR V Sbjct: 1882 LLTTHVGGLGLNLTS-ADTLVFMEHDWNPMRDHQFANIELNKLWQAMDRAHRLGQKRVVN 1940 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V+ LI + T++E V+ + K ++ + ++NA Sbjct: 1941 VHRLIMRGTLEEKVMSLQKFKVSVANTVINAENASM 1976 >gi|296220824|ref|XP_002756500.1| PREDICTED: lymphoid-specific helicase isoform 2 [Callithrix jacchus] Length = 881 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 66/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + ++ K L+ ++ + +++ Sbjct: 607 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVINSGKFLILDRMLPELKKRGHKVLLFSQ 666 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 667 MTSMLDILMDYCHLRNFNFSRLDGSMSYSERERNMHSFNTDPEVFIFLVSTRAGGLGINL 726 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 727 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 780 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 781 AKRKLEKLIIH 791 >gi|226288690|gb|EEH44202.1| TATA-binding protein-associated factor MOT1 [Paracoccidioides brasiliensis Pb18] Length = 1912 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 78/250 (31%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQG-----ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------ 50 K + F ++ D+ + + +L N +E H + Sbjct: 1583 KLFEDFTKKEQKDIAKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKENHKRYNEIQKL 1642 Query: 51 -----------VHDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + +V Sbjct: 1643 LEAKNSHIRDVAHAPKLSALRDLLVDCGIGVDPSTEGELDTGANYVSPHRALVFCQMKEM 1702 Query: 81 LARLQKAFPQ-------------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L +Q + K + ++N + +L + G GLNL Sbjct: 1703 LDIVQNDVFKKLLPSVQYLRLDGSVEAAKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1762 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1763 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1816 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1817 KIDVASTVVN 1826 >gi|295670740|ref|XP_002795917.1| TATA-binding protein-associated factor MOT1 [Paracoccidioides brasiliensis Pb01] gi|226284050|gb|EEH39616.1| TATA-binding protein-associated factor MOT1 [Paracoccidioides brasiliensis Pb01] Length = 1906 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 78/250 (31%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQG-----ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------ 50 K + F ++ D+ + + +L N +E H + Sbjct: 1577 KLFEDFTKKEQKDIAKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKENHKRYNEIQKS 1636 Query: 51 -----------VHDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + +V Sbjct: 1637 LEAKNSHIRDVAHAPKLSALRDLLVDCGIGVDPSTEGELDTGVNYVSPHRALVFCQMKEM 1696 Query: 81 LARLQKAFPQ-------------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L +Q + K + ++N + +L + G GLNL Sbjct: 1697 LDIVQNDVFKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1756 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1757 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1810 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1811 KIDVASTVVN 1820 >gi|225681546|gb|EEH19830.1| modifier of transcription [Paracoccidioides brasiliensis Pb03] Length = 1912 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 78/250 (31%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQG-----ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------ 50 K + F ++ D+ + + +L N +E H + Sbjct: 1583 KLFEDFTKKEQKDIAKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKENHKRYNEIQKL 1642 Query: 51 -----------VHDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + +V Sbjct: 1643 LEAKNSHIRDVAHAPKLSALRDLLVDCGIGVDPSTEGELDTGANYVSPHRALVFCQMKEM 1702 Query: 81 LARLQKAFPQ-------------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L +Q + K + ++N + +L + G GLNL Sbjct: 1703 LDIVQNDVFKRLLPSVQYLRLDGSVEAAKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1762 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1763 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1816 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1817 KIDVASTVVN 1826 >gi|308800202|ref|XP_003074882.1| Swr1 Swr1-Pie_related helicase (IC) [Ostreococcus tauri] gi|119358821|emb|CAL52149.3| Swr1 Swr1-Pie_related helicase (IC) [Ostreococcus tauri] Length = 1023 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 66/186 (35%), Gaps = 19/186 (10%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDL 81 N + + +K + K++ L ++ K +++ L Sbjct: 762 NILRLLAPLRKSIIRQSMFFPDKQLVQFDCGKLQVLATLLRTLKQGNHKVLIFTQMTRML 821 Query: 82 AR----------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 + ++ Q +N + +I + S G G+NL G + Sbjct: 822 DILESFLNLHGYSYCRLDGSTSTEQRQLLTQRFNGDDRIFIFILSTRSGGFGINLT-GAD 880 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++F+ W+ +++ R + G R V +Y LI + TI+E +LQ+ K + Sbjct: 881 TVIFYDSDWNPA-----MDQQAQDRCHRIGQTRDVHIYRLIGEGTIEESILQKAIQKREL 935 Query: 191 QDLLLN 196 + + Sbjct: 936 DSMAIQ 941 >gi|73946675|ref|XP_860860.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 34 [Canis familiaris] Length = 1548 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 953 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1012 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1013 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1072 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1073 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1128 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1129 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1177 >gi|291383316|ref|XP_002708231.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2-like isoform 2 [Oryctolagus cuniculus] Length = 1577 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 982 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1041 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1042 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1101 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1102 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1157 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1158 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1206 >gi|240281557|gb|EER45060.1| transcriptional accessory protein [Ajellomyces capsulatus H143] Length = 1913 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 77/250 (30%), Gaps = 61/250 (24%) Query: 2 KQYHKFQRELYCDLQG-----ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 K + F ++ D+ + + +L N +E H + Sbjct: 1584 KLFEDFTKKEQKDITKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKESHKQYDEIQKS 1643 Query: 52 ------------HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSD 80 H K+ AL ++ + +V Sbjct: 1644 LAAKNSHIRDVAHAPKLIALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQMKEM 1703 Query: 81 LARLQKAF-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L +Q K + ++N + +L + G GLNL Sbjct: 1704 LDIVQNDVLKKLLPSVQFLRLDGSVEATKRQSIVNQFNTDPSYDVLLLTTSVGGLGLNLT 1763 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ ++ + + R + G K+ V VY LI + T++E +L R Sbjct: 1764 -GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRF 1817 Query: 187 KSTIQDLLLN 196 K + ++N Sbjct: 1818 KIDVASTVVN 1827 >gi|321475222|gb|EFX86185.1| hypothetical protein DAPPUDRAFT_313238 [Daphnia pulex] Length = 1791 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 77/254 (30%), Gaps = 65/254 (25%) Query: 1 MKQYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWK-EVHD 53 +K Y F ++ +L + + + ++ N +H + EV Sbjct: 1465 VKLYEDFSKKH-AELNQTSQASASSPAHAHIFQALQYLRKVCNHPKLVLTPQHPQFEVFQ 1523 Query: 54 EKIKALEVIIEKANA-------------------------------------APIIVAYH 76 + +K + + ++ Sbjct: 1524 QHLKDQKSNLSDLQHASKLLALKQLLLDCGIGLDTANGSIDSPDTGGSVVSIHRALIFCQ 1583 Query: 77 FNSDLARLQKAFPQGRTLD-------------KDPCTIQEWN-EGKIPLLFAHPASCGHG 122 S + ++ + ++ +N + I +L G G Sbjct: 1584 LRSMIDIIENDLLKTHMKTVSYLRLDGSIAAGSRQGVVKRFNEDPSIDVLLLTTQVGGLG 1643 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL G + ++F W+ M + + R + G K+ V VY LI + T++E ++ Sbjct: 1644 LNLT-GADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMG 1697 Query: 183 RLRTKSTIQDLLLN 196 + K + +++ Sbjct: 1698 LQKFKLQTANTIIS 1711 >gi|331226428|ref|XP_003325884.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309304874|gb|EFP81465.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1071 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 80/231 (34%), Gaps = 45/231 (19%) Query: 6 KFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVH-------D 53 K +++ L+ E + + ++ ++ N + + Sbjct: 491 KLSQQIRYALEAEEGSTNSQSYKKLLNLLMQLRKVCNHPYLMPNSEPEPFLIAEHIVNVS 550 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTI 101 K+ L+ I++ +++ F S L L+ + + I Sbjct: 551 SKLVMLDKILKSELPKGKRLLIFSSFTSMLDILEDFLNLRQIDYLRLDGSTPVARRNLAI 610 Query: 102 QEWNEGK---------------IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + K +P+ + G G+NL + +V + W+ + Sbjct: 611 RIFQQTKTMDTLKSHGSSSQRIVPIFLISTKAGGLGINLTA-ADTVVLYDSSWNPQ---- 665 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ + R + G + V VY LI +++ ++ RLR K + +L++ Sbjct: 666 -VDIQAIARAHRIGQTQNVTVYRLICAESVEHQMIGRLRKKLYLSLKILDS 715 >gi|195354154|ref|XP_002043565.1| GM19418 [Drosophila sechellia] gi|194127733|gb|EDW49776.1| GM19418 [Drosophila sechellia] Length = 882 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + L + + + + + N + + I + Sbjct: 521 KFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEAPISPSGIYEMN 580 Query: 61 VI---------------IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + + K + +++ + L L+ Sbjct: 581 SLTKASGKLVLLSKMLKLLKKDNHRVLLFSQMSKMLNILEHFLEGEGYQYDRIDGAIRGD 640 Query: 98 --PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N+ + + G G+NL + ++ F W+ + Sbjct: 641 LRQKAIDRFNDPGSEQFVFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDVQAF 694 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G K+ V +Y + N+++E ++Q + K + L++ Sbjct: 695 SRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKRKMMLTHLVV 736 >gi|118092869|ref|XP_421689.2| PREDICTED: similar to TBP-associated factor 172 [Gallus gallus] Length = 1865 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1544 VQLYEDFAKSRAKCDIDETVSSISLREETEKPKLKATGHVFQALQYLRKLCNHPALVLTT 1603 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1604 QHPEYKRITEQLAAHNSSLRDIQHAPKLSALKQLLLDCGLGNGGSSESGTEAVVAQHRIL 1663 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 1664 IFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHV 1723 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1724 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1777 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 1778 KIMGLQKFKMNIANTVIS 1795 >gi|321461550|gb|EFX72581.1| hypothetical protein DAPPUDRAFT_227473 [Daphnia pulex] Length = 1801 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 26/224 (11%), Positives = 72/224 (32%), Gaps = 40/224 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y ++ G A + ++ + N A +++ + + L+ Sbjct: 693 KNYTALRK-------GNKGSASTFVNIVMELKKCCNHAFLTKPQENERRYGASATEQLQQ 745 Query: 62 IIE---------------KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---------- 96 +I + +++ L + + + Sbjct: 746 LIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRMLDLIAEYLQLRHFPFQRLDGGIKGEL 805 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + G G+NL + ++ F W+ + + Sbjct: 806 RRKAMEHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQA 859 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ + +++E +++R + K + L++ + Sbjct: 860 RAHRIGQKNQVNIYRLVTKASVEEDIVERAKRKMVLDHLVIQRM 903 >gi|330799785|ref|XP_003287922.1| hypothetical protein DICPUDRAFT_55110 [Dictyostelium purpureum] gi|325082056|gb|EGC35551.1| hypothetical protein DICPUDRAFT_55110 [Dictyostelium purpureum] Length = 1271 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 79/217 (36%), Gaps = 27/217 (12%) Query: 2 KQYHKFQRELYCD---LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y + + + L G A + V+ ++ N + +E++ + + + Sbjct: 516 KMYDLIKDKGFTAGSGLDGNPKLAKGLKNTYVQLRKICNHPYLFYDEEYPIDDNLIRYAG 575 Query: 59 LEVIIE------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 +++ KA +++ + L+ F ++ +Q Sbjct: 576 KFDLLDRLLPKLKAAGHRVLIFSQMTQLINILEVFFAYRDFKYLRLDGSTKSEERGPLLQ 635 Query: 103 EWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G GLNLQ + ++ F W+ + ++ R + G Sbjct: 636 LFNAPNSEYFIFVLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDLQAQDRAHRIG 689 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V L+ ++++E +L R K + ++ A Sbjct: 690 QKQTVRVLRLVTLHSVEENILARANFKKELDKKIIQA 726 >gi|302769197|ref|XP_002968018.1| hypothetical protein SELMODRAFT_440203 [Selaginella moellendorffii] gi|300164756|gb|EFJ31365.1| hypothetical protein SELMODRAFT_440203 [Selaginella moellendorffii] Length = 1234 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 79/223 (35%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYY--------DEEKHWKE 50 + QR Y L ++I+A N+ + ++ + N + Sbjct: 438 QMQRNYYKALLQKDIDAINTGGERRRLLNIAMQLRKCCNHPYLFQGAEPGPPYFTGEHLV 497 Query: 51 VHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + K+ L+ ++ K +++ L L+ G + + Sbjct: 498 ENSGKMVLLDKLLPKLKQRSSRVLIFSQMTRLLDILEDYCIFRGYPSCRIDGGTSGEDRE 557 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + + G G+NL +I++ + W+ + ++ R Sbjct: 558 FAIEAFNREGSEKFIFLLSTRAGGLGINL-ATADIVILYDSDWNPQ-----VDLQAQDRA 611 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ Q TI+E V++R K + L++ + Sbjct: 612 HRIGQKKEVQVFRFCTQYTIEEKVIERAYKKLALDALVIQQGR 654 >gi|254570084|ref|XP_002492152.1| Essential abundant protein involved in regulation of transcription [Pichia pastoris GS115] gi|238031949|emb|CAY69872.1| Essential abundant protein involved in regulation of transcription [Pichia pastoris GS115] gi|328351362|emb|CCA37761.1| TATA-binding protein-associated factor MOT1 [Pichia pastoris CBS 7435] Length = 1937 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 75/265 (28%), Gaps = 76/265 (28%) Query: 2 KQYHKFQREL-------YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--- 51 + Y F ++ D + + +L N KH + Sbjct: 1590 QLYRDFAKKQKGTVEAEVKDANEKKESKQHIFQALQYMRKLCNHPALVVTPKHPQYADVQ 1649 Query: 52 --------------HDEKIKALEVIIEKA------------------------------- 66 H K+ +L+ ++ + Sbjct: 1650 AYLRDSKMDIRDIRHAPKLVSLKTLLLECGIGSSDENSEEGLGSSLRRQQQQLVTGSEGV 1709 Query: 67 -NAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPL 111 + ++ L ++++N + I L Sbjct: 1710 ISQHRALIFCQLKDMLDMVENDLLRKHMPSVTYMRLDGSTDPHSRQSIVRKFNEDPSIDL 1769 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GLNL G + ++F W+ M + + R + G K+ V VY LI Sbjct: 1770 LLLTTKVGGLGLNLT-GADTVIFVEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRLI 1823 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 QNT++E ++ + K I ++N Sbjct: 1824 TQNTLEERIMGLQKFKMNIASSVVN 1848 >gi|255726014|ref|XP_002547933.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis MYA-3404] gi|240133857|gb|EER33412.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis MYA-3404] Length = 1063 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 77/228 (33%), Gaps = 39/228 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 Q + Y L ++I+A N + ++ + N + Sbjct: 387 DMQVDWYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 446 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYH----------FNSDLARLQKAFPQGRTL 94 + K+ L+ ++ KA + +++ + + Sbjct: 447 EHLVFNSGKMIILDKMLKKFKAEGSRVLIFSQMSRLLDILEDYCYFREYEYCRIDGSTSH 506 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N + + G G+NL +I++ + W+ + + Sbjct: 507 EDRIDAIDEYNSPDSEKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQA 560 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G K+ V VY + + I+E VL+R K + L++ ++ Sbjct: 561 MDRAHRIGQKKQVKVYRFVTEMAIEEKVLERAAQKLRLDQLVIQQGRQ 608 >gi|19552947|ref|NP_600949.1| helicase [Corynebacterium glutamicum ATCC 13032] gi|62390624|ref|YP_226026.1| superfamily II DNA/RNA helicase [Corynebacterium glutamicum ATCC 13032] gi|21324512|dbj|BAB99136.1| Superfamily II DNA/RNA helicases, SNF2 family [Corynebacterium glutamicum ATCC 13032] gi|41325962|emb|CAF20125.1| Superfamily II DNA/RNA helicase [Corynebacterium glutamicum ATCC 13032] Length = 613 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 61/237 (25%), Positives = 95/237 (40%), Gaps = 58/237 (24%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------------------------- 50 I A ++A+ +K LQ A GAVY D E + Sbjct: 382 ISAVHAATLRMKLLQYAGGAVYVDPEDSAQSQDLDASTARDVIDATNTAMTTITSRPTMI 441 Query: 51 VHDEKIKALEVIIEK-------------------ANAAPIIVAYHFNSDLARLQKAFPQG 91 VH K++ + I+ P +VAY F SD L Q Sbjct: 442 VHLHKVRKVIEILCNPALGGEPVNIDQDETGKQVYTPTPTLVAYRFISDKEILLHYLAQA 501 Query: 92 -----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D P + WN G+IP+L PAS GHGLN Q+GG+ LV+++L + E + Sbjct: 502 GVQGVEVFDGSPDMLSRWNAGRIPVLLLQPASAGHGLNFQHGGHRLVWYNLPDNNEHYM- 560 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G K V ++ +I +T D + L K+ Q L++A++++ + Sbjct: 561 ----QANARLHRIGQKNPVTIHRIITADTYDANMPAILAGKANRQQRLIDAVRRDPV 613 >gi|322503893|emb|CBZ38979.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1285 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 67/157 (42%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DPC 99 K++ LE + + +++ F L L++ G + Sbjct: 867 DCGKLQFLETALKKMRDEGHRMLIFTQFVHMLNILERFLALIGIVYTRLDGSTKAELRQQ 926 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + +I + S G GLNL G + ++F+ W+ I+ R + Sbjct: 927 YVDRFNADPRITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPT-----IDLQAQDRCHR 980 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V +Y LI+++T++E +L++ R + + ++++ Sbjct: 981 IGQTRPVTIYRLISEHTVEESILEKARERKKLNNVVI 1017 >gi|294659915|ref|XP_462354.2| DEHA2G18722p [Debaryomyces hansenii CBS767] gi|199434332|emb|CAG90861.2| DEHA2G18722p [Debaryomyces hansenii] Length = 834 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 73/192 (38%), Gaps = 17/192 (8%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 ++ + ++A N ++ + + +V + KIK + I+ I+ Sbjct: 615 EICMKRLDANNQSTDGTRFCKACGESVKVPKHHEDDYYVSSKIKQVLEILMTNRDRKTII 674 Query: 74 AYHFNSDL-----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 F S ++ ++ N+ + +L G Sbjct: 675 FSQFPSLFKVLGDTLSTKGFKILTYDGSMDIKARNFALNSLKNDPDMNVLLCSLKCGSVG 734 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + ++ F WW+ + +Q I+R+ + G + V +Y L +NT+++ +L+ Sbjct: 735 LNLT-CASQVILFDPWWNPQIQEQAIDRV-----YRIGQTKPVDIYELTVKNTVEDNILK 788 Query: 183 RLRTKSTIQDLL 194 +TK + + + Sbjct: 789 LQKTKRQLANAV 800 Score = 37.8 bits (86), Expect = 0.89, Method: Composition-based stats. Identities = 7/56 (12%), Positives = 18/56 (32%), Gaps = 1/56 (1%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K ++E + N+ ++ ++ QL E+ + K+ Sbjct: 538 KLKKE-ITQAKTGNVNYMSALVYLLRLRQLCCSWNLLFEDTEDSLNFEGKLTTSND 592 >gi|46128445|ref|XP_388776.1| hypothetical protein FG08600.1 [Gibberella zeae PH-1] Length = 2462 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 63/176 (35%), Gaps = 19/176 (10%) Query: 43 DEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDL-----------ARLQKAFPQ 90 + + + KI+ L I++ + IV F S L R + Sbjct: 2234 RDPNSPQVLASSKIRELIKILQNEVKEHKFIVFSQFTSMLNLVEPFFRKERFRFVRYDGS 2293 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + +++ ++ + +L GLNL +V +W+ +E Sbjct: 2294 MKNDEREESLRSLRSDPETRILLCSLKCGSLGLNLTA-ATRVVILEPFWNP-----FVEE 2347 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKETIHV 205 + R + V +Y L NT++E +L+ K + + + ++KE + + Sbjct: 2348 QAIDRVHRLTQTVDVIIYKLTVSNTVEERILELQDKKRELAEQAIEGGMRKEALKL 2403 Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 6/45 (13%), Positives = 13/45 (28%), Gaps = 4/45 (8%) Query: 2 KQYHKFQRELYCDLQG----ENIEAFNSASKTVKCLQLANGAVYY 42 K Y + L+ + N+ + ++ Q N Sbjct: 1888 KFYDRLAARADQSLEDQMLQGKVNYANALTLLLRLRQACNHPKLV 1932 >gi|327280078|ref|XP_003224781.1| PREDICTED: TATA-binding protein-associated factor 172-like [Anolis carolinensis] Length = 2315 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 76/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + A + +L N Sbjct: 1993 VQLYEDFAKSRAKCDVDETVSAVSLTEETEKTKLKATGHVFQALQYLRKLCNHPALVLTA 2052 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 H + H K+ AL+ ++ I+ Sbjct: 2053 SHPEYKRITEKLAAENSSLRDIQHAPKLSALKQLLLDCGLGNGGSSENGTETVVAQHRIL 2112 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + +N + I +L Sbjct: 2113 IFCQLKSMLDIVEHDLLKPHLPSITYLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHV 2172 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ M + + R + G KR V VY LI + T++E Sbjct: 2173 GGLGLNLT-GADTVVFVEHDWNP-----MKDLQAMDRAHRIGQKRVVNVYRLITRGTLEE 2226 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 2227 KIMGLQKFKMNIANTVIS 2244 >gi|322499392|emb|CBZ34465.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1126 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 18/149 (12%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKI 109 + + +++ +F L + + K + +N Sbjct: 801 DELKRNGERDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVPGS 860 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N L+ F W+ + + R + G K+ VF+ Sbjct: 861 QEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPAN-----DAQAMGRVWRDGQKKRVFI 914 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y L++ TI+E + QR +K + +++ Sbjct: 915 YRLLSTGTIEEKIYQRQVSKQGLSANVVD 943 >gi|146087788|ref|XP_001465905.1| DNA repair and recombination protein RAD54 [Leishmania infantum JPCM5] gi|134070006|emb|CAM68336.1| putative DNA repair and recombination protein RAD54 [Leishmania infantum JPCM5] Length = 1126 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 18/149 (12%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKI 109 + + +++ +F L + + K + +N Sbjct: 801 DELKRNGERDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKRQQLVDYFNVPGS 860 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N L+ F W+ + + R + G K+ VF+ Sbjct: 861 QEIVFLLSSKAGGVGLNL-IGANRLILFDPDWNPAN-----DAQAMGRVWRDGQKKRVFI 914 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y L++ TI+E + QR +K + +++ Sbjct: 915 YRLLSTGTIEEKIYQRQVSKQGLSANVVD 943 >gi|326484392|gb|EGE08402.1| DNA repair and recombination protein RAD54 [Trichophyton equinum CBS 127.97] Length = 820 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 18/179 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 + ++NG E K W + + I + I++ ++ L ++ Sbjct: 555 MMVSNGRRGDREVKTWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARA 614 Query: 91 --------GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + K + ++N+ + + G G+NL G N LV F W+ Sbjct: 615 YGCIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWN 673 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q + R + G + FVY IA TI+E + QR K ++ ++++ + Sbjct: 674 PAADQ-----QALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 727 >gi|290983303|ref|XP_002674368.1| helicase-like protein [Naegleria gruberi] gi|284087958|gb|EFC41624.1| helicase-like protein [Naegleria gruberi] Length = 745 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 76/226 (33%), Gaps = 37/226 (16%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 + Y+ + + + + + + ++ ++ N E + Sbjct: 451 EYYNAVKSKDLLPIFKDQKRANSTTLLNLLMQMRKICNHPFLLREFETKDSESESASNKR 510 Query: 52 -------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLA-----------RLQKAFPQG 91 + K L ++E K N +++ L Sbjct: 511 FLKECTQNSGKFGLLVKMLENLKKNGHKVLIFSLMTRFLDVLEDYLECRGDMKYCRIDGS 570 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I+E+N + + + G G+NL + ++ + W+ + I+ Sbjct: 571 IAQTEREQKIKEFNQDEDVFCFLLSTRAGGLGINLTA-ADTVIIYDSDWNPQ-----IDL 624 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G KR+V ++ L+ T+++ VLQ K ++ L+++ Sbjct: 625 QAQDRCHRIGQKRSVRIFRLLTLGTVEKKVLQTATKKLKLERLIIH 670 >gi|196010103|ref|XP_002114916.1| hypothetical protein TRIADDRAFT_58909 [Trichoplax adhaerens] gi|190582299|gb|EDV22372.1| hypothetical protein TRIADDRAFT_58909 [Trichoplax adhaerens] Length = 1351 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 63/205 (30%), Gaps = 16/205 (7%) Query: 3 QYHKFQRELYCDLQGENIEAFN------SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y Q++ G + + ++ ++ N + + H Sbjct: 790 LYDHMQKQGVLLTDGSEKDRKGHGGTKALMNTIMQLRKICNHPFLFQHIEEALSEHFGMK 849 Query: 57 KALEV--IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LL 112 L +I + + + + + +N P + Sbjct: 850 GGLVTGVLIFCQMTNLMTIMEDYLVWRGFRYLRLDGTTKAEDRGQLLALFNAENSPYFIF 909 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNLQ + +V F W+ + + R + G + V V L+ Sbjct: 910 LLSTRAGGLGLNLQS-ADTVVIFDSDWNPHQ-----DLQAQDRAHRIGQQNEVRVLRLMT 963 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 +++E +L R K + + ++ A Sbjct: 964 VQSVEEKILAAARYKLNVDEKVIQA 988 >gi|194384656|dbj|BAG59488.1| unnamed protein product [Homo sapiens] Length = 979 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 23/194 (11%), Positives = 56/194 (28%), Gaps = 33/194 (17%) Query: 29 TVKCLQLANGAVYYD-------------EEKHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 + + N + E K+ L+ ++ K +++ Sbjct: 1 MMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLI 60 Query: 74 AYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIP--LLFAHPASCGH 121 L L+ + I +N + G Sbjct: 61 FSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGL 120 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL + ++ F W+ + +R + G V +Y + + +++E + Sbjct: 121 GINL-ATTDTVIIFDSDWNP-----HNDIQAFSRAHRIGQANKVMIYRFVTRASVEERIT 174 Query: 182 QRLRTKSTIQDLLL 195 Q + K + L++ Sbjct: 175 QVAKRKMMLTHLVV 188 >gi|73946667|ref|XP_860732.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 31 [Canis familiaris] Length = 1548 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 951 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1010 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1011 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1070 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1071 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1126 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1127 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1175 >gi|28573600|ref|NP_788424.1| domino, isoform E [Drosophila melanogaster] gi|28380650|gb|AAM70872.2| domino, isoform E [Drosophila melanogaster] Length = 2497 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 67/179 (37%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 + + + + K++ ++ ++ + N +++ L L+ Sbjct: 1636 LHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLN 1695 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ +N + +I S G G+NL G + ++F+ Sbjct: 1696 YHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSD 1754 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1755 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 1808 >gi|88319960|ref|NP_001034645.1| fibrinogen silencer-binding protein [Mus musculus] gi|51316246|sp|Q6PFE3|RA54B_MOUSE RecName: Full=DNA repair and recombination protein RAD54B; AltName: Full=RAD54 homolog B gi|34785459|gb|AAH57604.1| RIKEN cDNA E130016E03 gene [Mus musculus] gi|123227625|emb|CAM18403.1| RAD54 homolog B (S. cerevisiae) [Mus musculus] Length = 886 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 71/248 (28%), Gaps = 55/248 (22%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 ++ Y K R + +E +L N KE + Sbjct: 534 IELYRKLLRSQSVRFCLQGLLENSAHLICIGALKKLCNHPCLLFSSVKGKEFSSSCEENE 593 Query: 60 EVIIEK------------------------------------ANAAPIIVAYHFNSDLA- 82 E + + +I+ ++ L Sbjct: 594 ERNLCQGLLSVFPAGYNPLQFSEEESGKLQVLVKLLAVIHELRPTEKVILVSNYRQTLNV 653 Query: 83 RLQKAFPQGRTLDK---------DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNI 131 + G + + +N + + G GLNL GG+ Sbjct: 654 LEEVCKRHGYACARLDGQTPVSQRQHIVDSFNSKYSTDFIFLLSSKAGGVGLNL-IGGSH 712 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 713 LILYDIDWNPAT-----DIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLS 767 Query: 192 DLLLNALK 199 +++ + Sbjct: 768 GAVVDLTR 775 >gi|238878835|gb|EEQ42473.1| chromatin remodelling complex ATPase chain ISW1 [Candida albicans WO-1] Length = 1017 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 78/226 (34%), Gaps = 39/226 (17%) Query: 7 FQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEKH 47 Q+ LY + ++I+A N + ++ + N + Sbjct: 374 MQKNLYQKILEKDIDAVNGANGKKESKTRLLNIVMQLRKCCNHPYLFEGVEPGPPYTTDE 433 Query: 48 WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LD 95 + +K+ L+ ++ + + +++ + L L+ Sbjct: 434 HLVYNSQKMLILDQLLKKFQQEGSRVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTEHS 493 Query: 96 KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I E+N+ + + G G+NL +I++ F W+ + + + Sbjct: 494 DRINAIDEYNKPGSEKFIFLLTTRAGGLGINLTS-ADIVILFDSDWNPQA-----DLQAM 547 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V V+ I + I+E VL+R K + L++ + Sbjct: 548 DRAHRIGQTKQVKVFRFITERAIEEKVLERAAQKLRLDQLVIQQGR 593 >gi|73946621|ref|XP_859943.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 9 [Canis familiaris] Length = 1532 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 74/229 (32%), Gaps = 40/229 (17%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + + + Sbjct: 939 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEVMVDPYWFVT 998 Query: 53 ----------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 999 VINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDG 1058 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1059 TTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ----- 1112 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1113 DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1161 >gi|255564822|ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1| Helicase, putative [Ricinus communis] Length = 2029 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 11/168 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +Q G + K + K + +I + + F + Sbjct: 1027 RLIQFDCGKLQ----KLAVLLRRLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDG 1082 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ +Q +N KI L S G G+NL +G + ++F+ W+ ++ Sbjct: 1083 STQPEQRQTLMQRFNTNPKIFLFILSTRSGGVGINL-FGADTVIFYDSDWNPA-----MD 1136 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G R V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 1137 QQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 1184 >gi|260834763|ref|XP_002612379.1| hypothetical protein BRAFLDRAFT_218963 [Branchiostoma floridae] gi|229297756|gb|EEN68388.1| hypothetical protein BRAFLDRAFT_218963 [Branchiostoma floridae] Length = 1849 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 71/234 (30%), Gaps = 42/234 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVY----------------- 41 K Y + L + N + ++ + N Sbjct: 394 KYYRAILERNFTFLAKGCGSSSNVPNLMNTMMELRKCCNHPYLINGAEEKILGEYKDQHG 453 Query: 42 --YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 + + H K+ ++ ++ K A +++ L L+ Q + Sbjct: 454 ENHGKYLHCMVQASGKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLVQNVYPYER 513 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + ++ F W+ + Sbjct: 514 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN-- 570 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G ++V VY L+ + T + + R K + +L +++ Sbjct: 571 ---DLQAQARCHRIGQSKSVKVYRLLTRATYERDMFDRASLKLGLDKAVLQSMR 621 >gi|32563629|ref|NP_491994.2| hypothetical protein H06O01.2 [Caenorhabditis elegans] gi|25004979|emb|CAB07481.2| C. elegans protein H06O01.2, confirmed by transcript evidence [Caenorhabditis elegans] Length = 1461 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 75/220 (34%), Gaps = 31/220 (14%) Query: 4 YHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKE----------VH 52 Y + Y +L + N ++ + N A + H + Sbjct: 650 YKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYDDAQGRLQQLLKS 709 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K+ L+ ++ K +++ L LQ+ R + Sbjct: 710 SGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQA 769 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + G G+NL + ++ F W+ + + ++R + Sbjct: 770 LDHYNAPGSTDFAFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAMSRAHR 823 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G + V +Y L+ + +++E +++R + K + L++ + Sbjct: 824 IGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRM 863 >gi|325185489|emb|CCA19972.1| PREDICTED: similar to SWI/SNFrelated matrixassociated actindependent regulator of chromatin a2 isoform b isoform 10 putative [Albugo laibachii Nc14] Length = 1295 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 77/223 (34%), Gaps = 32/223 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLANGAVYYDEEKHWKEVHDE 54 Y + Q+ L+ E E + A ++ ++ N + + + + Sbjct: 738 LYRRIQQGGAILLEQEGNEKSSKAKYTFKGLSNVLMQLRKVCNHPYLFQPQGYPIDFDLV 797 Query: 55 KIKALEVIIEKA------NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + ++++ +++ + L+ F + D+ Sbjct: 798 RSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHILEDYFQYRSFTYLRLDGSTSADERE 857 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N P + + G GLNL + ++ F W+ ++ R Sbjct: 858 QRMFMFNASDSPHFIFLLSTRAGGLGLNL-ATADTVIIFDSDWNPA-----MDAQAQDRA 911 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V V+ L+ + ++E +L R K + +L++ A K Sbjct: 912 HRIGQKNEVRVFRLVTNSPVEEKILSRATNKLNMNNLVVEAGK 954 >gi|327307624|ref|XP_003238503.1| TBP associated factor Mot1 [Trichophyton rubrum CBS 118892] gi|326458759|gb|EGD84212.1| TBP associated factor Mot1 [Trichophyton rubrum CBS 118892] Length = 1903 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 78/243 (32%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 K Q+++ + + EA + +L N +E H + Sbjct: 1583 QKEQKDIANKVGSSDKEAKEHIFQALQYMRRLCNSPALVMKEGHKQYHQVQKLLASKNSN 1642 Query: 52 -----HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLARLQKA 87 H K+ AL ++ + ++ L +Q Sbjct: 1643 IRDIAHAPKLSALRDLLIDCGIGVDPSAEGELATGASYVSPHRALIFCQMKEMLDIVQND 1702 Query: 88 F-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 K + ++N + +L + G GLNL G + ++ Sbjct: 1703 VLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVI 1761 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1762 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1816 Query: 194 LLN 196 ++N Sbjct: 1817 VVN 1819 >gi|301788109|ref|XP_002929471.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Ailuropoda melanoleuca] Length = 911 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 73/248 (29%), Gaps = 55/248 (22%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVY------------------ 41 ++ Y K + + +L N Sbjct: 557 IELYRKLLNSQAVRFCLQGLLGNSPHLICIGALKKLCNHPCLLFNSIKEKEYSSTWDGNE 616 Query: 42 --------------YDEEKHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLAR 83 + E K++ L ++ + +++ ++ L Sbjct: 617 ERSLYEGLVDVFPADYNPLMFMEEESGKLQVLMKLLAVIHELRPTEKVVLVSNYTQTLNI 676 Query: 84 -LQKAFPQGRTLDK---------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 + G T + + +N + + G GLNL GG+ Sbjct: 677 LQEVCKRHGYTYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNL-IGGSH 735 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 736 LILYDIDWNPAT-----DIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLS 790 Query: 192 DLLLNALK 199 +++ K Sbjct: 791 GAVVDLTK 798 >gi|148673695|gb|EDL05642.1| mCG142038, isoform CRA_b [Mus musculus] Length = 886 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 71/248 (28%), Gaps = 55/248 (22%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 ++ Y K R + +E +L N KE + Sbjct: 534 IELYRKLLRSQSVRFCLQGLLENSAHLICIGALKKLCNHPCLLFSSVKGKEFSSSCEENE 593 Query: 60 EVIIEK------------------------------------ANAAPIIVAYHFNSDLA- 82 E + + +I+ ++ L Sbjct: 594 ERNLCQGLLSVFPAGYNPLQFSEEESGKLQVLVKLLAVIHELRPTEKVILVSNYRQTLNV 653 Query: 83 RLQKAFPQGRTLDK---------DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNI 131 + G + + +N + + G GLNL GG+ Sbjct: 654 LEEVCKRHGYACARLDGQTPVSQRQHIVDSFNSKYSTDFIFLLSSKAGGVGLNL-IGGSH 712 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 713 LILYDIDWNPAT-----DIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLS 767 Query: 192 DLLLNALK 199 +++ + Sbjct: 768 GAVVDLTR 775 >gi|296417472|ref|XP_002838381.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634311|emb|CAZ82572.1| unnamed protein product [Tuber melanosporum] Length = 1069 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 71/214 (33%), Gaps = 28/214 (13%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWKEVHDEKIKALEV 61 + G+ + ++ + N + + K+ L+ Sbjct: 372 DAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHIIDNSGKMVMLDK 431 Query: 62 II--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKI 109 ++ KA + +++ + L + I E+N+ Sbjct: 432 LLKRMKAQKSRVLIFSQMSRQLDILEDYCVFREYPYCRIDGSTAHEDRITAIDEYNKPGS 491 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL +I+V + W+ + + + R + G + V V Sbjct: 492 EKFIFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDRAHRIGQTKQVMV 545 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + +N I+E VL+R K + L++ + + Sbjct: 546 FRFVTENAIEEKVLERAAQKLRLDQLVIQQGRSQ 579 >gi|115634727|ref|XP_787293.2| PREDICTED: similar to MGC81081 protein [Strongylocentrotus purpuratus] gi|115924449|ref|XP_001196643.1| PREDICTED: similar to MGC81081 protein [Strongylocentrotus purpuratus] Length = 600 Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 73/241 (30%), Gaps = 58/241 (24%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 K Y +F ++ N ++ Q E + Sbjct: 369 KIYDQFLQQSR-----STSNKTNILVILLRLRQCCCHLSLLKELPDQESCEMDGIELDLV 423 Query: 53 -------------------DEKIKALEVIIEK-------ANAAPIIVAYHFNSDLARLQK 86 KIK + ++EK ++ + L ++ Sbjct: 424 RQMKEMGLGDMTLYPPSFLSTKIKFVINLLEKIRAAGPADRPEKSVLVSQWTGMLDVVEH 483 Query: 87 AFPQG----------RTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVF 134 + + ++ ++++N ++ + G LNL GGN L F Sbjct: 484 HLKEAGFKCWSIDGDVSPNERDEALKDFNYNPRGRQIMLVSLRTGGATLNL-SGGNHLFF 542 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ Q +RI + G R V ++ I +TI+ + + + K + + + Sbjct: 543 LDMHWNPALEDQACDRI-----YRIGQTRKVHIHKFICSDTIEYRISELQKKKKKLANDV 597 Query: 195 L 195 L Sbjct: 598 L 598 >gi|270001259|gb|EEZ97706.1| brahma [Tribolium castaneum] Length = 1649 Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 69/231 (29%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1087 LYKHMQSKGVLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQNIEEKYCDHVGIS 1146 Query: 53 ------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K +++ + ++ Sbjct: 1147 GGVISGPDLYRASGKFELLDRILPKLKVTGHRVLLFCQMTQLMTIMEDYLSWRGFGYLRL 1206 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++N + G GLNLQ + ++ F W+ + Sbjct: 1207 DGTTKAEDRGDLLKKFNAKNSDYFLFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1262 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1263 --DLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1311 >gi|239611302|gb|EEQ88289.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3] Length = 1072 Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 18/168 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQGRTLD----- 95 DE + + KI+ L I++K + IV F S L +++ Sbjct: 823 DDEPETPDHLASTKIRHLMKILKKESGDYKFIVFSFFTSMLNKIEPFLKDSHIGYARYDG 882 Query: 96 ------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ + N K +L + GLNL + +V +W+ +E Sbjct: 883 AMRNDLREHSLDRLRNSPKTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVE 936 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + V +Y L + T++E ++ K + + + Sbjct: 937 EQAIDRVHRLNQTVDVKIYKLTIKGTVEERIVDLQERKRELANATIEG 984 Score = 39.0 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 16/43 (37%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + + L + G+NI ++ ++ Q N Sbjct: 569 YKRLEQRTDKTLERMIGGDNINYASALVLLLRLRQACNHPDLV 611 >gi|224111230|ref|XP_002315787.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222864827|gb|EEF01958.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1132 Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 80/213 (37%), Gaps = 25/213 (11%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKA 58 Y + L + ++ + + T++ + N + + + K + Sbjct: 673 YQQVTEMGRVGLHTGSGKSKSLQNLTMQLRKCCNHPYLFVGDYNMWRKDEIMRASGKFEL 732 Query: 59 LEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNE 106 L+ ++ K + +++ + L+ + ++++N Sbjct: 733 LDRLLPKLHATDHRVLLFSQMTRLMDILEIYLQLHDYKYLRLDGSTKTEERGTLLKKFNA 792 Query: 107 GKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + G GLNLQ + ++ F W+ + +++ R + G K+ Sbjct: 793 PDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQKKE 846 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +++E++L+R + K I ++ A Sbjct: 847 VRVFVLVSVGSVEEVILERAKQKKGIDAKVIQA 879 >gi|210075955|ref|XP_504989.2| YALI0F04356p [Yarrowia lipolytica] gi|199424920|emb|CAG77796.2| YALI0F04356p [Yarrowia lipolytica] Length = 1242 Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 73/208 (35%), Gaps = 29/208 (13%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEVHDEKIKALEVI 62 E + + I + + ++AN K++ + + Sbjct: 963 EFLSTIAFDKISTSQTLAN---LRKVANSPYLVKFPWGEEEPVDERIISDSGKMRVFDQL 1019 Query: 63 IEK--ANAAPIIVAYHF----------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + + ++V F L++ I +NE P Sbjct: 1020 AMELVSRKHKMLVFSQFSGTLDLLTEWCEFRHLPYCMLIGSMGLEERQEMIDAFNEESGP 1079 Query: 111 -LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G+NL + +V F W+ ++ ++ + R + G K+ +Y Sbjct: 1080 SIFLITTRAGGTGINLTA-ADSVVIFDSDWNPQQ-----DKQAIDRSHRIGQKKPCVIYR 1133 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI+ NT++E++++ K + ++++ A Sbjct: 1134 LISTNTMEEMLVRVASDKKRLDEMVIQA 1161 >gi|309362352|emb|CAP28139.2| hypothetical protein CBG_08287 [Caenorhabditis briggsae AF16] Length = 1512 Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 76/225 (33%), Gaps = 35/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------- 53 Y ++ L D + A + ++ V +L N + + H Sbjct: 784 IYRHMKKGLLLD-AKASSGARSLSNTIVHLRKLCNHPFLFQNIEDSCRAHWKVNEVNGKE 842 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ I+ K A+ +++ + + + D+ Sbjct: 843 LMRVAGKLELLDRILPKLKASGHRVLMFFQMTKMMDIFEDFLHFRNYTYLRLDGSTKPDE 902 Query: 97 DPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G GLNLQ + ++ F W+ + Sbjct: 903 RGDLLSLYNAPDSEYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQD 956 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 957 RAHRIGQKKEVRVLRLITANSVEEKMLAVARYKLNVDEKVIQAGK 1001 >gi|73946673|ref|XP_860834.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 33 [Canis familiaris] Length = 1536 Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 941 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1000 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1001 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1060 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1061 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1116 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1117 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1165 >gi|294140756|ref|YP_003556734.1| helicase, Snf2 family [Shewanella violacea DSS12] gi|293327225|dbj|BAJ01956.1| helicase, Snf2 family [Shewanella violacea DSS12] Length = 694 Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 64/214 (29%), Gaps = 54/214 (25%) Query: 29 TVKCLQLANGA--------------------------------------VYYDEEKHWKE 50 +K Q+ + E+ + Sbjct: 460 LLKLRQVCCHPKLLKLDHLQQSSQDNVYLDTGWDTSNIDVSHKLGSVNGLQLAEDVSKLD 519 Query: 51 VHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCT 100 K+ L + +++ F S L + + Sbjct: 520 TRSGKLNWLADKLPGMLEEGRRVLIFSSFTSMLTLIGELLENLGISFVELTGKSRDRGAL 579 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + + ++P+ + G GLNL ++++ WW+ Q R + G Sbjct: 580 VKRFQQREVPVFLISLKAGGAGLNLTA-ADVVIHTDPWWNPAAEQ-----QASDRAHRIG 633 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++VFVY LI + T++E + +K+ + + Sbjct: 634 QDKSVFVYKLICKETVEERIQLLQESKNNLAQSI 667 >gi|146104782|ref|XP_001469910.1| helicase [Leishmania infantum] gi|134074280|emb|CAM73025.1| putative helicase [Leishmania infantum JPCM5] Length = 1285 Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 68/157 (43%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DPC 99 K++ LE + + + +++ F L L++ G + Sbjct: 867 DCGKLQFLETALKKMRDDGHRMLIFTQFVHMLNILERFLALIGIVYTRLDGSTKAELRQQ 926 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + +I + S G GLNL G + ++F+ W+ I+ R + Sbjct: 927 YVDRFNADPRITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPT-----IDLQAQDRCHR 980 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V +Y LI+++T++E +L++ R + + ++++ Sbjct: 981 IGQTRPVTIYRLISEHTVEESILEKARERKKLNNVVI 1017 >gi|109090006|ref|XP_001095492.1| PREDICTED: lymphoid-specific helicase isoform 11 [Macaca mulatta] Length = 805 Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 531 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 590 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 591 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNMDPEVFIFLVSTRAGGLGINL 650 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NT+D+ +++R Sbjct: 651 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTVDQKIVERAA 704 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 705 AKRKLEKLIIH 715 >gi|123477045|ref|XP_001321692.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121904523|gb|EAY09469.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1425 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/233 (12%), Positives = 72/233 (30%), Gaps = 43/233 (18%) Query: 4 YHKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEV---------- 51 Y F E L + + + ++ ++ N Sbjct: 499 YRAFLDENRDVLLSQITSGALPSLKNLMMQLRKVCNHPYLIKGATDTILEQFTKASPENT 558 Query: 52 ------------HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF--------- 88 K+ ++ ++ K A+ +++ L L+ Sbjct: 559 PKSDIELKALVQSSGKLILIDKLLPKLKADGHKVLIFSQMVKVLDILEDYIAIKGYKCER 618 Query: 89 -PQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I+ + N+ + + G G+NL + ++ + W+ + Sbjct: 619 IDGSVAENDRQAAIERFGNDPDAFIFLLCTKAGGVGINLTA-ADTVIIYDSDWNPQN--- 674 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +R + G + V VY L+ + T + +L R K + LL++++ Sbjct: 675 --DIQAQSRCHRIGQTQKVKVYRLVTRGTYELDMLDRASKKLGLDHALLDSVE 725 >gi|296425383|ref|XP_002842221.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638482|emb|CAZ86412.1| unnamed protein product [Tuber melanosporum] Length = 1480 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 75/206 (36%), Gaps = 34/206 (16%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH-------------DEKIKALEVIIEKANAAPIIVA 74 ++ + Y+E+ ++V ++ +L + K +++ Sbjct: 976 LLMQLRKCLCHPFLYNEDIEEQDVDPETAHKNLVDAGSKLELLSLLLPKLKEKGHRVLMF 1035 Query: 75 YHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHG 122 F L + G + + I +N + G G Sbjct: 1036 TQFLGMLDILEDFLFALDLKYQRLDGGVSTLERQKRIDSFNAPDSKYFAFMLSTRAGGVG 1095 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL + ++ ++ + + ++R + G + V V++L+ ++T +E ++Q Sbjct: 1096 INL-ATADTVIILDPDFNPHQ-----DIQALSRAHRIGQTKRVQVFHLVTRDTAEEKIIQ 1149 Query: 183 RLRTKSTIQDLLL---NALKKETIHV 205 + K ++ L++ +A ++E + V Sbjct: 1150 IGKKKLSLDHLIIEKMDATEEEEVDV 1175 >gi|194855230|ref|XP_001968500.1| GG24470 [Drosophila erecta] gi|190660367|gb|EDV57559.1| GG24470 [Drosophila erecta] Length = 1886 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 71/225 (31%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------EEKH 47 KQY+K + +G+ + ++ + N A E Sbjct: 770 KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQ 829 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L + + Sbjct: 830 TLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGE 889 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 890 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 943 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 944 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 988 >gi|50312307|ref|XP_456186.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49645322|emb|CAG98894.1| KLLA0F24838p [Kluyveromyces lactis] Length = 1062 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 81/224 (36%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEK 46 Q E Y L ++I+A N A ++ + N + Sbjct: 375 DMQIEWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 434 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ +++K + +++ + L L+ + Sbjct: 435 EHLVFNSGKMIVLDKLLKKKKEQGSRVLIFSQMSRLLDILEDYCYFRGYEYCRIDGSTSH 494 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+ I E+N+ + + G G+NL + +V + W+ + + Sbjct: 495 DERVEAIDEYNKPNSEKFIFLLTTRAGGLGINLVT-ADTVVLYDSDWNPQA-----DLQA 548 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ VFVY + +N I+E V++R K + L++ Sbjct: 549 MDRAHRIGQKKQVFVYRFVTENAIEEKVIERAAQKLRLDQLVIQ 592 >gi|290997882|ref|XP_002681510.1| TATA-binding protein-associated factor 172 [Naegleria gruberi] gi|284095134|gb|EFC48766.1| TATA-binding protein-associated factor 172 [Naegleria gruberi] Length = 1788 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 75/236 (31%), Gaps = 50/236 (21%) Query: 5 HKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEVH----------- 52 + + + + + I + +L N E H Sbjct: 1485 QELKSQQEDKTKAKEISENSHVFKALKYLRKLCNHPCLVLEPDHPMYESVTQEIKQQGLD 1544 Query: 53 ------DEKIKALEVIIEKA------------NAAPIIVAYHFNSDLARLQKAFPQGRTL 94 K+ +L+ ++ N +++ L +Q Sbjct: 1545 VRDVNLSPKLLSLKQLLNDCGIGAGNSDVDSSNQHRVLIFCQLKQMLDIIQNELFAKYMP 1604 Query: 95 D-------------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + K + ++N + I +L G GLNL G + ++F W+ Sbjct: 1605 NVTFMRLDGDVETTKRYEIVTKFNSDPTIDVLLLTTKIGGLGLNLT-GADTVIFVEHDWN 1663 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ V VY LI +NT++E ++ + K+ I ++N Sbjct: 1664 PSA-----DLQAMDRAHRIGQKKVVNVYRLITRNTLEEKIMGLQKFKTNISKSVIN 1714 >gi|242023203|ref|XP_002432025.1| DNA repair and recombination protein RAD54B, putative [Pediculus humanus corporis] gi|212517383|gb|EEB19287.1| DNA repair and recombination protein RAD54B, putative [Pediculus humanus corporis] Length = 840 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 79/223 (35%), Gaps = 26/223 (11%) Query: 3 QYHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----HDEKIK 57 Y+ + E IE + ++ N +++ ++ E K+K Sbjct: 511 MYNSLVNSFLNAKESEEFIEGSSHLELITSLKKICNYPSLLNKDDNYLEKIDIDTSGKLK 570 Query: 58 ALEVIIEKANAA----PIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQE 103 +++ +++ + L + +++ Sbjct: 571 VTVNFLKELQMTSVKEKVLIVSNATQTLNLLEKVFHVLNYSTCRLDGNTPSAQRNKIVED 630 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + + G GLN+ G + L+ F W+ + ++R + G K Sbjct: 631 FNTSRDLFIFLLSSKAGGVGLNVT-GASRLILFDSDWNPAT-----DLQAISRIWRDGQK 684 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VF+Y L+ TI+E + QR +K + + ++ ++I + Sbjct: 685 FPVFIYRLLTTGTIEEKIYQRQISKQGLCEGTVDPKSNKSIKL 727 >gi|121700154|ref|XP_001268342.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1] gi|119396484|gb|EAW06916.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1] Length = 682 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 384 LKAIGLLKKLCNHPDLLDLSRDLPGCEHTYPEDYVPPEARGRDRDIKSWYSGKMMVLDRM 443 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K T++K + ++N+ Sbjct: 444 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVNKRQKLVDKFNDPNG 503 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 504 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 557 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 558 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 589 >gi|115472213|ref|NP_001059705.1| Os07g0497000 [Oryza sativa Japonica Group] gi|113611241|dbj|BAF21619.1| Os07g0497000 [Oryza sativa Japonica Group] Length = 622 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 79/227 (34%), Gaps = 33/227 (14%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHDEK 55 + Y + Y L+ G+ + + ++ ++ N E + +H+ + Sbjct: 226 EYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMR 285 Query: 56 IK--------ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLD 95 IK + I + +++ L L+ ++ Sbjct: 286 IKASAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKTFERVDGSVSVA 345 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I +N+ K + SCG G+NL + ++ + ++ + + Sbjct: 346 ERQAAIARFNQDKSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNP-----HADIQAMN 399 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + VY L+ + +++E +L + K + L +N + + Sbjct: 400 RAHRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVNKSESQ 446 >gi|281337385|gb|EFB12969.1| hypothetical protein PANDA_010298 [Ailuropoda melanoleuca] Length = 1583 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|302415028|ref|XP_003005346.1| helicase SWR1 [Verticillium albo-atrum VaMs.102] gi|261356415|gb|EEY18843.1| helicase SWR1 [Verticillium albo-atrum VaMs.102] Length = 969 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 72/221 (32%), Gaps = 33/221 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK-----------EV 51 Y + E ++ N + + + + +K + Sbjct: 733 LYDEL--ETMFKSGPSELQQPNMEHLIGELKN-CSDFELHLWCRDYKCLEGFDLPEGSWM 789 Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHF----------NSDLARLQKAFPQGRTLDKDPC 99 K+ + +I + N ++V F ++++ Sbjct: 790 ESGKVTKMLELIHQYQANGDRVLVFSKFAKVIEILREVLHTDGIKHCVLYGATSVEERQG 849 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N IP+ + G G+NL N ++ F + ++ + R + Sbjct: 850 LINEFNENTDIPVFLLTTGAGGTGINLTS-ANKVIIFDQSDNPQD-----DIQAENRAHR 903 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G R V V L+ + TI+EL+ + K + + + A++ Sbjct: 904 LGQTRDVEVIRLLTRRTIEELIFKACEKKIELANKVTGAVE 944 >gi|195999278|ref|XP_002109507.1| hypothetical protein TRIADDRAFT_53614 [Trichoplax adhaerens] gi|190587631|gb|EDV27673.1| hypothetical protein TRIADDRAFT_53614 [Trichoplax adhaerens] Length = 619 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 82/242 (33%), Gaps = 55/242 (22%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----------------HDEK 55 + + ++ + N V EKH + H K Sbjct: 316 LEESKKEPSKMHAFQALQYLRLICNHPVLVLNEKHPQYYEITSRLSRENLELSSIQHSAK 375 Query: 56 IKALEVIIEKAN------------------AAPIIVAYHFNSDLARLQKAFPQGR----- 92 + AL+ ++ + +V + + + +++ + + Sbjct: 376 LMALKQLLLECGIGIPTTNVASVSVMPVVAQHRALVFFQSKAMMKLVEEKLFKDKDSTVA 435 Query: 93 --------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ + + +N + I ++ G GLNL G + ++F W+ Sbjct: 436 YVKLSGDVSIKERAEIVSRFNKDPSIDVMLLTTKVGGVGLNLT-GADTVIFVEHDWNP-- 492 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 M + + R + G K+ V VY LI +NT++E +L KS I + +++ + Sbjct: 493 ---MADAQAMDRAHRIGQKKVVNVYRLITRNTLEEKILGLQNFKSKIANTVISQENASLM 549 Query: 204 HV 205 + Sbjct: 550 SM 551 >gi|268553029|ref|XP_002634497.1| Hypothetical protein CBG08287 [Caenorhabditis briggsae] Length = 1480 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 76/225 (33%), Gaps = 35/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------- 53 Y ++ L D + A + ++ V +L N + + H Sbjct: 784 IYRHMKKGLLLD-AKASSGARSLSNTIVHLRKLCNHPFLFQNIEDSCRAHWKVNEVNGKE 842 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ I+ K A+ +++ + + + D+ Sbjct: 843 LMRVAGKLELLDRILPKLKASGHRVLMFFQMTKMMDIFEDFLHFRNYTYLRLDGSTKPDE 902 Query: 97 DPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G GLNLQ + ++ F W+ + Sbjct: 903 RGDLLSLYNAPDSEYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQD 956 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 957 RAHRIGQKKEVRVLRLITANSVEEKMLAVARYKLNVDEKVIQAGK 1001 >gi|281344850|gb|EFB20434.1| hypothetical protein PANDA_017908 [Ailuropoda melanoleuca] Length = 1133 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 706 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLS 765 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 766 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 825 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 826 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 879 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 880 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 923 >gi|327271091|ref|XP_003220321.1| PREDICTED: DNA repair and recombination protein RAD54-like [Anolis carolinensis] Length = 906 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 82/233 (35%), Gaps = 43/233 (18%) Query: 2 KQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y +F ++ + E + +S S +L N ++ +E Sbjct: 584 ELYKQFLKQAKPAEDLKEGKISVSSLSSITSLKKLCNHPALIHDKCVEEEEGFVGALKLF 643 Query: 53 -------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ------ 90 K+ L+ I+ + + +++ ++ L +K Sbjct: 644 PPGYSTKSLEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRNRRYLYV 703 Query: 91 ----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 704 RLDGTMSIKKRAKVVEHFNSVSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN- 761 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 762 ----DEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDE 810 >gi|212534456|ref|XP_002147384.1| dsDNA-dependent ATPase Rad54, putative [Penicillium marneffei ATCC 18224] gi|210069783|gb|EEA23873.1| dsDNA-dependent ATPase Rad54, putative [Penicillium marneffei ATCC 18224] Length = 808 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 67/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 510 LKAIGLLKKLCNHPDLLDLARDLPGCEQYFPDDYVPPDGRGRDRDIKSWYSGKMMVLDRM 569 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K ++K + ++N+ Sbjct: 570 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNDPNG 629 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N LV F W+ Q + R + G K+ FV Sbjct: 630 EEFIFLLSSKAGGCGINL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 683 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 684 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 715 >gi|125550816|gb|EAY96525.1| hypothetical protein OsI_18430 [Oryza sativa Indica Group] Length = 1088 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 72/213 (33%), Gaps = 26/213 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----HDEKIKA 58 Y + L + +++ + N + E + + K + Sbjct: 653 YEQVTSNGRVSLGSGLKSKA-LQNLSMQLRKCCNHPYLFVEHYNMYQRQEIVRSSGKFEL 711 Query: 59 LEVIIEKAN--AAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWN- 105 L+ ++ K +++ ++ + ++N Sbjct: 712 LDRLLPKLQRAGHRVLLFSQMTKLLDILEVYLQIYQFKYMRLDGSTKTEERGRLLADFNK 771 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + L + G GLNLQ + ++ F W+ + +++ R + G K Sbjct: 772 KDSEYFLFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQKNE 825 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +I+E +L R + K I ++ A Sbjct: 826 VRVFVLVSVGSIEEEILDRAKQKMGIDAKVIQA 858 >gi|312383263|gb|EFR28419.1| hypothetical protein AND_03670 [Anopheles darlingi] Length = 814 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 42/211 (19%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK------------------------IK 57 + S +L N ++ EK + Sbjct: 458 TLTALSNITTLKKLCNHPDLVYDKIQEGADGFEKAGNILPANYSPRELRPELGAKLLLLD 517 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 + I+ I++ ++ L +K + T+ K + ++N Sbjct: 518 CMLASIKTNTNDKIVLVSNYTQTLDLFEKLCRKRGYGYVRLDGTMTIKKRGKVVDQFNSP 577 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G N LV F W+ + + R + G K+ Sbjct: 578 DSSDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN-----DEQAMARVWRDGQKKPC 631 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y L+A +I+E + QR K + +++ Sbjct: 632 FIYRLLATGSIEEKIFQRQTHKKALSTTVVD 662 >gi|157119050|ref|XP_001659312.1| E1a binding protein P400 [Aedes aegypti] gi|108883212|gb|EAT47437.1| E1a binding protein P400 [Aedes aegypti] Length = 3081 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 70/179 (39%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 + + + + K++ L+ ++++ + +++ L L+ Sbjct: 1602 LHPIISAMSTQFPDPRLIQYDCGKLQTLDRLLKQLKSGGHRVLIFTQMTRMLDVLEAFLN 1661 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ +N + ++ + S G G+NL G + ++F+ Sbjct: 1662 YHGHIYLRLDGTTKVEQRQLLMERFNGDKRVFVFILSTRSGGVGINLT-GADTVIFYDSD 1720 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y L+++ TI+E +L++ K + DL + Sbjct: 1721 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTIEENILKKANQKRMLGDLAIEG 1774 >gi|73946665|ref|XP_860704.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 30 [Canis familiaris] Length = 1533 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 936 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 995 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 996 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1055 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1056 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1111 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1112 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1160 >gi|259485020|tpe|CBF81736.1| TPA: DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 833 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + + W + + Sbjct: 535 LKAIGILKKLCNHPDLLNLSTDLPGCEHAFPDDYVPVEARGRDRDVRPWYSGKMMVLDRM 594 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K + K + ++N+ Sbjct: 595 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVKKRQKLVDKFNDPDG 654 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 655 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 708 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 709 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 740 >gi|71681342|gb|AAI00395.1| Helicase, lymphoid specific [Mus musculus] Length = 821 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + ++V Sbjct: 547 MMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLVFSQ 606 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + I +N + + L + G G+NL Sbjct: 607 MTSMLDILMDYCHPRNFIFSRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINL 666 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 667 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 720 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 721 AKRKLEKLIIH 731 >gi|194754060|ref|XP_001959323.1| GF12812 [Drosophila ananassae] gi|190620621|gb|EDV36145.1| GF12812 [Drosophila ananassae] Length = 3199 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 72/197 (36%), Gaps = 19/197 (9%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPI 71 ++ E K + + + + K++ L+ ++ + A+ + Sbjct: 1621 EMAIEERVGREVLPKLALLHPIISAMRTQFPDPRLIQYDCGKLQTLDRLLRQLKADGHRV 1680 Query: 72 IVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCG 120 ++ L L+ + + ++ +N + +I S G Sbjct: 1681 LIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQMHMERFNGDKRIFCFILSTRSGG 1740 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL G + ++F+ W+ ++ R + G R V +Y L+++ TI+ + Sbjct: 1741 VGINL-MGADTVIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTIEVNI 1794 Query: 181 LQRLRTKSTIQDLLLNA 197 L++ K + D+ + Sbjct: 1795 LKKANQKRMLSDMAIEG 1811 >gi|73946657|ref|XP_860572.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 26 [Canis familiaris] Length = 1498 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 903 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 962 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 963 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1022 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1023 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1078 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1079 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1127 >gi|312211525|emb|CBX91610.1| hypothetical protein [Leptosphaeria maculans] Length = 1473 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 59/170 (34%), Gaps = 18/170 (10%) Query: 43 DEEKHWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD------ 95 E V KI+ L I+ ++ +IV F S L ++ + Sbjct: 1237 PEYDASDLVPSTKIRQLLSILEKETPEHKVIVFSQFTSMLDLIEPFLKRADYNFTRYDGS 1296 Query: 96 -----KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ + N+ + +L GLNL + +V +W+ +E Sbjct: 1297 MRNDLREASLAKLRNDKRTRVLLCSLKCGSLGLNLTA-ASRVVIMEPFWNP-----FVEE 1350 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + V VY L+ N+++E + + K + + + K Sbjct: 1351 QAIDRVHRLNQTVDVTVYRLLINNSVEERIQELQEAKRKLANAAIEGGKA 1400 Score = 39.0 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 11/40 (27%), Gaps = 4/40 (10%) Query: 4 YHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGA 39 Y + L GE + + ++ Q N Sbjct: 935 YDRLSDRAQSRLDEMMGGEKQDYIGALVLLLRLRQACNHP 974 >gi|189206215|ref|XP_001939442.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975535|gb|EDU42161.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1271 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 26/224 (11%), Positives = 66/224 (29%), Gaps = 37/224 (16%) Query: 7 FQRELYC-DLQGENIEA---FNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDEK 55 +E + +I + ++ + + K Sbjct: 599 IVKEALSKEQTDSSINKGAWKKLMNLVMQLRKCCSHPYQLPGVAPDPYYLGDHIIRASGK 658 Query: 56 IKALEVIIEKA---NAAPIIVAYHFNSDLAR---------------LQKAFPQGRTLDKD 97 LE +++ +++ F L + + Sbjct: 659 FILLEKLLKHTVFAQGKKVLIFSSFTRTLDHCEDLLSLISNHGERFKSLRLDGSTSRARR 718 Query: 98 PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+ +N+ ++ + G G+NL ++F W+ + R Sbjct: 719 NLDIRLFNQKGSDYKVMLLSTRAGGLGINLTS-AEDVIFLDEDWNPQITL-----QAEAR 772 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V +Y L Q T++E ++ R+R K + + +++ Sbjct: 773 AHRIGQTKKVTIYKLCTQGTVEEQMMGRIRKKLYLSAKITESMQ 816 >gi|296414553|ref|XP_002836963.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632810|emb|CAZ81154.1| unnamed protein product [Tuber melanosporum] Length = 1645 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 15/142 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +K + I+E ++ + + G K + ++N + I +L Sbjct: 1439 LKEMLDIVENDVLKKLLPSVSYLRM--------DGGTEARKRQDIVTKFNGDPSIDVLLL 1490 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ ++ + R + G K+ V VY L+ + Sbjct: 1491 TTHVGGLGLNLT-GADTVIFVEHDWNPQKDM-----QAMDRAHRIGQKKVVNVYRLVTRG 1544 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ R K + ++N Sbjct: 1545 TLEEKIMSLQRFKLDVASTVVN 1566 >gi|303275450|ref|XP_003057019.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226461371|gb|EEH58664.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 665 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 7/126 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFF 135 F S + G + + ++N + + G GLN+ N +V F Sbjct: 517 FLSRRGYVYCRLDGGTAQNARQPLVDDFNNSSSMFVFLLSTKAGGVGLNITS-ANRVVVF 575 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + R + G +R V VY IA +TI+E+V QR K ++ + Sbjct: 576 DPDWNPAL-----DLQAQDRAYRIGQRRDVNVYRFIAADTIEEIVYQRQVYKQQQSNVAV 630 Query: 196 NALKKE 201 +A+++ Sbjct: 631 DAVRER 636 >gi|109090000|ref|XP_001095601.1| PREDICTED: lymphoid-specific helicase isoform 12 [Macaca mulatta] Length = 883 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 609 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 668 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 669 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNMDPEVFIFLVSTRAGGLGINL 728 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NT+D+ +++R Sbjct: 729 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTVDQKIVERAA 782 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 783 AKRKLEKLIIH 793 >gi|296220832|ref|XP_002756504.1| PREDICTED: lymphoid-specific helicase isoform 6 [Callithrix jacchus] Length = 821 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 66/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + ++ K L+ ++ + +++ Sbjct: 547 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVINSGKFLILDRMLPELKKRGHKVLLFSQ 606 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 607 MTSMLDILMDYCHLRNFNFSRLDGSMSYSERERNMHSFNTDPEVFIFLVSTRAGGLGINL 666 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 667 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 720 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 721 AKRKLEKLIIH 731 >gi|221117281|ref|XP_002154909.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 765 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 67/192 (34%), Gaps = 29/192 (15%) Query: 29 TVKCLQLANGAVYYDEE----------KHWKEVHDEKIKALEVIIE--KANAAPIIVAYH 76 ++ + N + K+ L+ I+ K+N +++ Sbjct: 505 MMQLRKCCNHPYLLEYPLDPKTQELVIDENIIKTSGKMLLLDKILPALKSNGHKVLIFSQ 564 Query: 77 FNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 + LQ LD+ + ++ ++ + + G GLNL Sbjct: 565 MTQMMDILQDYCYLRGYGYCRIDGTMSVLDRQENIKKFTDDKELFIFLLSTRAGGLGLNL 624 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + + + W+ + ++ R + G + V +Y + NTID+ +++R Sbjct: 625 -MMADTCIIYDSDWNPQ-----VDLQAQDRCHRIGQTKPVVIYRFVTANTIDQKIIERAA 678 Query: 186 TKSTIQDLLLNA 197 K ++ ++++ Sbjct: 679 CKRKLEKMVIHE 690 >gi|71019185|ref|XP_759823.1| hypothetical protein UM03676.1 [Ustilago maydis 521] gi|46099621|gb|EAK84854.1| hypothetical protein UM03676.1 [Ustilago maydis 521] Length = 1060 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 81/242 (33%), Gaps = 51/242 (21%) Query: 1 MKQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGA------------------- 39 ++ Y ++ LQG N + +L N Sbjct: 606 LRIYQAILGSSQVRSLLQGAP---GNGLLQIGVLRKLCNSPELLLKDTEADADSPTKALV 662 Query: 40 -----VYYDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQG 91 + + K+ + +++ +++ +F S L ++ + Sbjct: 663 GDLTRFFPPNFVRNEARFGGKLICVMNLLQTVRAQTDDKVVLVSNFTSTLDIIEAMMRKK 722 Query: 92 R----------TLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLW 138 R D+ + ++N + + S G GLNL G N LV Sbjct: 723 RYPYLRLDGKTPQDERMAMVNQFNREGVDKSFVFLLSAKSGGVGLNL-IGANRLVLIDSD 781 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ + + R + G K+ ++Y L+ T+DE + QR +K + D L+NA Sbjct: 782 WNPST-----DLQAMARIHRDGQKKPCYIYRLLLSGTMDEKIYQRQISKLGLSDSLMNAE 836 Query: 199 KK 200 KK Sbjct: 837 KK 838 >gi|226706292|sp|B0R0I6|CHD8_DANRE RecName: Full=Chromodomain-helicase-DNA-binding protein 8; Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8 Length = 2511 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 70/234 (29%), Gaps = 43/234 (18%) Query: 2 KQYHKFQRELYCDLQGE---NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------- 51 K Y + L N N + ++ + N + Sbjct: 1095 KYYRAILERNFSFLSMGATQNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYD 1154 Query: 52 -------------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 K+ L+ ++ KA +++ L L+ R L + Sbjct: 1155 PLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 1214 Query: 97 D----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I +++ + + G G+NL + V F W+ + Sbjct: 1215 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCVIFDSDWNPQN- 1272 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + R + G +AV VY LI +N+ + +L + K + +L ++ Sbjct: 1273 ----DLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSM 1322 >gi|320169022|gb|EFW45921.1| chromodomain-helicase-DNA-binding protein 7 [Capsaspora owczarzaki ATCC 30864] Length = 2669 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 23/232 (9%), Positives = 68/232 (29%), Gaps = 43/232 (18%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + L + + + ++ + N + Sbjct: 1158 KYYQAILGRNFEFLAKGCNKNDMPSLMNIVMELRKCCNHPYLIGGAEEKILGEIYGPNFY 1217 Query: 53 --------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 K+ ++ ++++ N +++ L LQ + + Sbjct: 1218 STSPATLLLTLIQASGKLVLIDKLLKRLRENGHKVLIFSQMVRCLDILQDYLTAMQYKFE 1277 Query: 97 D----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I +++ + + G G+NL + ++ + W+ + Sbjct: 1278 RIDGGIRGEARQAAIDRFSKPGSDSFVFLLCTRAGGVGINLTA-ADTVIIYDSDWNPQN- 1335 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G ++V +Y L+ +N+ + + + K + +L Sbjct: 1336 ----DLQAQARCHRIGQTKSVKIYRLLTRNSYEREMFDKASMKLGLDQAVLQ 1383 >gi|145342259|ref|XP_001416174.1| Swr1-Pie_related helicase [Ostreococcus lucimarinus CCE9901] gi|144576399|gb|ABO94467.1| Swr1-Pie_related helicase [Ostreococcus lucimarinus CCE9901] Length = 1053 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 68/185 (36%), Gaps = 19/185 (10%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 + + + +K + K++ L ++ K + ++ L Sbjct: 782 ALGLMAPIRKFVARQSMFVPDKRLVQFDCGKLQILATLLRKLKQDGHKALIFTQMTKMLD 841 Query: 83 ----------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 ++ +Q +N + ++ + S G G+NL G + Sbjct: 842 VLEAFLNLHGYTYCRLDGSTGAEQRQLLMQRFNSDKRLFVFILSTRSGGFGINLT-GADT 900 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ +++ R + G R V +Y LI++ TI+E +LQ+ K + Sbjct: 901 VIFYDSDWNPA-----MDQQAQDRCHRIGQTREVHIYRLISEGTIEESILQKAVQKRELD 955 Query: 192 DLLLN 196 ++ + Sbjct: 956 NMAIQ 960 >gi|241999570|ref|XP_002434428.1| conserved hypothetical protein [Ixodes scapularis] gi|215497758|gb|EEC07252.1| conserved hypothetical protein [Ixodes scapularis] Length = 3286 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 67/227 (29%), Gaps = 39/227 (17%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + L I N + ++ + + Sbjct: 1161 KYYRAILERNFAFLTKGGIGTNVPNLMNTMMELRKCCIHPYLIKGAEEQILQEYRLQHGE 1220 Query: 53 ------------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 K+ L+ ++ K ++V L L+ R L Sbjct: 1221 SLELALNALVQASGKLVLLDKLLPRLKDGGHRVLVFSQMVRCLDLLEDYLVHKRYL---- 1276 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + G G+NL + +V F W+ + + R + Sbjct: 1277 EYSDRF------VFLLCTRAGGLGINLTA-ADTVVIFDSDWNPQN-----DLQAQARCHR 1324 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G +AV VY LI +NT + + + K + +L +L + +V Sbjct: 1325 IGQSKAVKVYRLICRNTYEREMFDKASLKLGLDRAVLQSLNAQKENV 1371 >gi|213983091|ref|NP_001135693.1| helicase, lymphoid-specific [Xenopus (Silurana) tropicalis] gi|197246289|gb|AAI69179.1| Unknown (protein for MGC:189674) [Xenopus (Silurana) tropicalis] gi|197246404|gb|AAI68798.1| Unknown (protein for MGC:188967) [Xenopus (Silurana) tropicalis] Length = 840 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 64/194 (32%), Gaps = 29/194 (14%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + K L+ ++ + +++ Sbjct: 569 MMLLRKCCNHPYLIEYPLDPLTQDFKIDEELVNSSGKFLLLDRLLPEMKKRGHKVLIFSQ 628 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + ++++N E + + + G G+NL Sbjct: 629 MTMMLDILMDYCYYKKFNFCRLDGSMSYSDREENMRKFNTEPDVFIFLVSTRAGGLGINL 688 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G R V VY L+ NTID+ +++R Sbjct: 689 TA-ADTVIIYDSDWNPQA-----DLQAQDRCHRIGQTRPVVVYRLVTANTIDQKIVERAA 742 Query: 186 TKSTIQDLLLNALK 199 K ++ L+++ K Sbjct: 743 AKRKLEKLVIHKNK 756 >gi|195470933|ref|XP_002087761.1| GE14968 [Drosophila yakuba] gi|194173862|gb|EDW87473.1| GE14968 [Drosophila yakuba] Length = 1883 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 71/225 (31%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------EEKH 47 KQY+K + +G+ + ++ + N A E Sbjct: 769 KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQ 828 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L + + Sbjct: 829 TLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGE 888 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 889 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 942 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 943 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 987 >gi|326926799|ref|XP_003209584.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Meleagris gallopavo] Length = 1837 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 729 KQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGIETLQS 788 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 789 LIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 848 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 849 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 902 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 946 >gi|303388827|ref|XP_003072647.1| Mot1 helicase-like protein [Encephalitozoon intestinalis ATCC 50506] gi|303301788|gb|ADM11287.1| Mot1 helicase-like protein [Encephalitozoon intestinalis ATCC 50506] Length = 1257 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 82/223 (36%), Gaps = 32/223 (14%) Query: 2 KQYHKF------QRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDE 54 K Y + ++ DL+ I+ N K + L + ++ + Sbjct: 1029 KLYREINERGGKEKLEDVDLEYGKIDQKNVGFKRTRDLLLAVSHMSHFKDSSEV----SC 1084 Query: 55 KIKALEVIIEKANAA----PIIVAYHFNS--DLARLQKAFPQGRTLDK---------DPC 99 K+KALE II I++ + F S D + Sbjct: 1085 KVKALEDIISLCGGEDLRSKILIFFQFKSSIDFVIKDIMEKYKFKYSRLDGSVPSSTRAK 1144 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +E+N G +LF G GLNL G + +V + W+ + + R + Sbjct: 1145 IAEEFNTGTTQILFLTTQVGGLGLNLT-GADTVVMYEHDWNP-----FNDLQAMDRAHRI 1198 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G KR V V+ LIA+NT++E V+ K + + L++ + Sbjct: 1199 GQKRTVNVFRLIAKNTLEEKVMNLQSFKMFVANSLVSQQNADI 1241 >gi|170087336|ref|XP_001874891.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82] gi|164650091|gb|EDR14332.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82] Length = 816 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 64/219 (29%), Gaps = 48/219 (21%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------------------------- 53 +L N D K Sbjct: 514 TTSQPLKAINILKKLCNHPELLDLPDDLKGCDHLIPEGFSSTAARSRGKGGKQTVRCDWG 573 Query: 54 EKIKALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K LE + + I++ ++ L +K T+ K Sbjct: 574 GKFLVLERFLHQIKTQTTDKIVLISNYTQTLDLFEKLCRSKKYGFFRLDGSMTIVKRQKL 633 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++N+ + + G G+NL G N L+ F W+ Q + R + Sbjct: 634 VDQFNDPDGKEFIFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQ-----QALARVWR 687 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ FVY I+ TI+E + QR K + +++ Sbjct: 688 DGQKKECFVYRFISTGTIEEKIFQRQANKQALSSAVVDE 726 >gi|119570415|gb|EAW50030.1| helicase, lymphoid-specific, isoform CRA_e [Homo sapiens] Length = 432 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 158 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 217 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 218 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 277 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 278 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 331 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 332 AKRKLEKLIIH 342 >gi|218197912|gb|EEC80339.1| hypothetical protein OsI_22408 [Oryza sativa Indica Group] Length = 4284 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 70/223 (31%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 Y K + + G ++ + + ++ + N E + Sbjct: 1240 AYQKLLIKRVEENLGGIGAVKVRSVHNTVMELRNICNHPYLSQLHVEEIEGYLPRHYLPS 1299 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ ++ K +++ L ++ + + Sbjct: 1300 ILRLCGKLEMLDRLLPKLKATGHRVLLFSTMTRLLDVMEDYLVWKKYKYLRLDGHTSGQE 1359 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I ++N + + G G+NLQ + ++ F W+ + ++ Sbjct: 1360 RGALIDKFNNPNSQAFIFLLSIRAGGVGVNLQA-ADTVIIFDTDWNPQ-----VDLQAQA 1413 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V L T++E V K + + + A Sbjct: 1414 RAHRIGQKKEVLVLRLETVQTVEEQVRASAEHKLGVANQSITA 1456 >gi|115400547|ref|XP_001215862.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191528|gb|EAU33228.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1087 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 60/169 (35%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 E + KI+ L I+ ++ IV F S L +++ + Sbjct: 835 LNPGEGENDILPSTKIRHLMKILRRESADHKFIVFSVFTSMLDKIEPFLKRAGIGFARYD 894 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 R ++ + N +L + GLNL + +V +W+ + Sbjct: 895 GGMRNDLREASLNKLRNNSGTRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FV 948 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E + R + V +Y LI ++T++E +L K + ++ + Sbjct: 949 EEQAIDRVHRLNQTLDVKIYKLIIKDTVEERILDLQDRKRELANVTIEG 997 Score = 38.2 bits (87), Expect = 0.73, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 15/46 (32%), Gaps = 4/46 (8%) Query: 1 MKQYHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYY 42 M Y + ++ L+ G ++ + ++ Q N Sbjct: 594 MNFYKRLEQRTENSLEKMMGGSKLDYAGALVLLLRLRQSCNHPDLV 639 >gi|52076407|dbj|BAD45237.1| putative STH1 protein [Oryza sativa Japonica Group] Length = 3389 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 70/223 (31%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 Y K + + G ++ + + ++ + N E + Sbjct: 1270 AYQKLLIKRVEENLGGIGAVKVRSVHNTVMELRNICNHPYLSQLHVEEIEGYLPRHYLPS 1329 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ ++ K +++ L ++ + + Sbjct: 1330 ILRLCGKLEMLDRLLPKLKATGHRVLLFSTMTRLLDVMEDYLVWKKYKYLRLDGHTSGQE 1389 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I ++N + + G G+NLQ + ++ F W+ + ++ Sbjct: 1390 RGALIDKFNNPNSQAFIFLLSIRAGGVGVNLQA-ADTVIIFDTDWNPQ-----VDLQAQA 1443 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V L T++E V K + + + A Sbjct: 1444 RAHRIGQKKEVLVLRLETVQTVEEQVRASAEHKLGVANQSITA 1486 >gi|194205835|ref|XP_001502330.2| PREDICTED: helicase, lymphoid-specific isoform 2 [Equus caballus] Length = 808 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 63/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 534 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKTRGHKVLLFSQ 593 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + + +N + + + + G G+NL Sbjct: 594 MTRMLDILMDYCHFRDFNFSRLDGSMSYSEREKNMHNFNTDPDVFIFLVSTRAGGLGINL 653 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 654 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 707 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 708 AKRKLEKLIIH 718 >gi|302504353|ref|XP_003014135.1| hypothetical protein ARB_07440 [Arthroderma benhamiae CBS 112371] gi|291177703|gb|EFE33495.1| hypothetical protein ARB_07440 [Arthroderma benhamiae CBS 112371] Length = 790 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 18/177 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---- 90 ++NG E K W + + I + I++ ++ L ++ Sbjct: 527 VSNGRRGDREVKTWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYG 586 Query: 91 ------GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + K + ++N+ + + G G+NL G N LV F W+ Sbjct: 587 CIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPA 645 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q + R + G + FVY IA TI+E + QR K ++ ++++ + Sbjct: 646 ADQ-----QALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 697 >gi|330913020|ref|XP_003296155.1| hypothetical protein PTT_05138 [Pyrenophora teres f. teres 0-1] gi|311331916|gb|EFQ95739.1| hypothetical protein PTT_05138 [Pyrenophora teres f. teres 0-1] Length = 1131 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQRELYCDLQGE---NIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 ++ Y K + + G + ++ + N + Sbjct: 443 VQWYKKILEKDIDAVNGGAGNKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 502 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKD 97 + K+ L+ ++ KA + +++ + + Sbjct: 503 VTNAAKMVMLDKLLKRMKAQGSRVLIFSQMSRVLDIMEDYSVMRGYQYCRIDGSTAHEDR 562 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N+ L + G G+NL +I+V F W+ + + + R Sbjct: 563 IQAIDDYNKEGSEKFLFLLTTRAGGLGINLTS-ADIVVLFDSDWNPQA-----DLQAMDR 616 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V+V+ + + I+E VL+R K + L++ + Sbjct: 617 AHRIGQTKQVYVFRFVTEMAIEEKVLERAAQKLRLDQLVIQQGR 660 >gi|261205500|ref|XP_002627487.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] gi|239592546|gb|EEQ75127.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] Length = 1072 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 18/168 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQGRTLD----- 95 DE + + KI+ L I++K + IV F S L +++ Sbjct: 823 DDEPETPDHLASTKIRHLMKILKKESGDYKFIVFSFFTSMLNKIEPFLKDSHIGYARYDG 882 Query: 96 ------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ + N K +L + GLNL + +V +W+ +E Sbjct: 883 AMRNDLREHSLDRLRNSPKTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVE 936 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + V +Y L + T++E ++ K + + + Sbjct: 937 EQAIDRVHRLNQTVDVKIYKLTIKGTVEERIVDLQERKRELANATIEG 984 Score = 39.0 bits (89), Expect = 0.39, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 16/43 (37%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + + L + G+NI ++ ++ Q N Sbjct: 569 YKRLEQRTDKTLERMIGGDNINYASALVLLLRLRQACNHPDLV 611 >gi|118095916|ref|XP_413879.2| PREDICTED: similar to chromodomain helicase DNA binding protein 2 [Gallus gallus] Length = 1837 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 729 KQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGIETLQS 788 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 789 LIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 848 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 849 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 902 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 946 >gi|17137266|ref|NP_477197.1| Chromodomain-helicase-DNA-binding protein 1 [Drosophila melanogaster] gi|75009913|sp|Q7KU24|CHD1_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase Chd1 gi|7295870|gb|AAF51170.1| Chromodomain-helicase-DNA-binding protein 1 [Drosophila melanogaster] Length = 1883 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 71/225 (31%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------EEKH 47 KQY+K + +G+ + ++ + N A E Sbjct: 770 KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQ 829 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L + + Sbjct: 830 TLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGE 889 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 890 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 943 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 944 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 988 >gi|316963964|gb|EFV49303.1| conserved hypothetical protein [Trichinella spiralis] Length = 1024 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 67/180 (37%), Gaps = 21/180 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 E E K+++L ++ +A ++ L L+ + Sbjct: 610 RLCFPELRLIEYDCGKLQSLSALLRRLQAEGHRCLIFTQMARMLDILEAFLSYHGYMYLR 669 Query: 96 --------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +N + KI S G G+NL G + ++F+ W+ Sbjct: 670 LDGATNIERRQMLMERFNHDKKILCFILSTRSGGVGVNLT-GADTVIFYDSDWNPT---- 724 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 ++ R + G R V +Y LI + TI+E +L + K + +L ++ K + H Sbjct: 725 -MDAQAQDRCHRIGQTRDVHIYRLICERTIEENILLKATQKRKLGELAIDEGGFKADFFH 783 >gi|307189408|gb|EFN73818.1| Putative DNA helicase Ino80 [Camponotus floridanus] Length = 1624 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCT 100 K+ L+ ++ K +++ + L++ + D+ Sbjct: 1078 GKLSVLDSLLRRLKEQGHRVLIYSQMTKMIDLLEEYMYHRKHTFMRLDGSSKISDRRDMV 1137 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + + G G+NL + ++F+ W+ +++ + R + G Sbjct: 1138 ADFQKRADIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHRLG 1191 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1192 QTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 1228 >gi|301767448|ref|XP_002919141.1| PREDICTED: probable global transcription activator SNF2L2-like [Ailuropoda melanoleuca] Length = 1546 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 933 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 992 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 993 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1052 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1053 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1108 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1109 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1157 >gi|91081375|ref|XP_972116.1| PREDICTED: similar to helicase [Tribolium castaneum] gi|270005181|gb|EFA01629.1| hypothetical protein TcasGA2_TC007199 [Tribolium castaneum] Length = 1011 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 83/225 (36%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYYD--EEKHWKEVHDE 54 K QRE Y + ++I+ N A K ++ + +N +D E + Sbjct: 362 KMQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEH 421 Query: 55 KIKALEVIIEKA--------NAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + ++ + +++ L L+ + + Sbjct: 422 LVYNCGKMVLLDKLLPKLKEQDSRVLIFSQMTRMLDILEDYCHWRQYNYCRLDGQTPHED 481 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I E+NE + + G G+NL ++++ + W+ + ++ + Sbjct: 482 RQRQINEYNEPNSSKFIFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ-----MDLQAMD 535 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V+ LI +NT++E +++R K + L++ + Sbjct: 536 RAHRIGQKKQVRVFRLITENTVEEKIVERAEVKLRLDKLVIQQGR 580 >gi|9956001|gb|AAG01987.1| similar to Mus musculus lymphocyte specific helicase mRNA with GenBank Accession Number U25691.1 [Homo sapiens] gi|21410637|gb|AAH31004.1| HELLS protein [Homo sapiens] gi|21411296|gb|AAH30963.1| HELLS protein [Homo sapiens] Length = 348 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 74 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 133 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 134 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 193 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 194 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 247 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 248 AKRKLEKLIIH 258 >gi|1448983|gb|AAC37264.1| chromodomain-helicase-DNA-binding protein [Drosophila melanogaster] Length = 1883 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 71/225 (31%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------EEKH 47 KQY+K + +G+ + ++ + N A E Sbjct: 770 KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQ 829 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L + + Sbjct: 830 TLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGE 889 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 890 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 943 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 944 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 988 >gi|45199055|ref|NP_986084.1| AFR537Wp [Ashbya gossypii ATCC 10895] gi|44985130|gb|AAS53908.1| AFR537Wp [Ashbya gossypii ATCC 10895] Length = 1025 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 79/224 (35%), Gaps = 39/224 (17%) Query: 6 KFQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYYD--EEKHWKEVH 52 Q + Y L ++I+A N A ++ + N ++ E Sbjct: 367 AMQLQWYRSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTD 426 Query: 53 DEKIKALEVII--------EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + I +I +K + +++ + L L+ + Sbjct: 427 EHLIYNSGKMIVLDKLLKRKKKEGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGATSH 486 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ I E+N + + G G+NL + +V + W+ + + Sbjct: 487 EERIAAIDEFNAHDSKKFIFLLTTRAGGLGINLVT-ADTVVLYDSDWNPQA-----DLQA 540 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K+ V VY L+ +N I+E V++R K + L++ Sbjct: 541 MDRAHRIGQKKQVHVYRLVTENAIEEKVIERAAQKLRLDQLVIQ 584 >gi|67901102|ref|XP_680807.1| hypothetical protein AN7538.2 [Aspergillus nidulans FGSC A4] gi|40742928|gb|EAA62118.1| hypothetical protein AN7538.2 [Aspergillus nidulans FGSC A4] gi|259483857|tpe|CBF79592.1| TPA: ATP-dependent DNA helicase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1132 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 60/169 (35%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQK-----------AF 88 + + + KI+ L I+ +A IV F S L +++ Sbjct: 887 LNPGDDENQVLPSTKIRQLMKILRREAPDFKFIVFSVFTSMLDKIEPFLSRAGIGYARYD 946 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 R ++ + N +L + GLNL + +V +W+ + Sbjct: 947 GSMRNDLREASLEKLRNHRGTRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FV 1000 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E + R + V +Y +I ++T++E +L K + ++ + Sbjct: 1001 EEQAIDRVHRLNQTVDVKIYKMIIKDTVEERILDLQERKRELANVTIEG 1049 Score = 41.3 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 5/44 (11%), Positives = 14/44 (31%), Gaps = 4/44 (9%) Query: 4 YHKFQRE----LYCDLQGENIEAFNSASKTVKCLQLANGAVYYD 43 Y + ++ L + I+ + + ++ Q N Sbjct: 639 YERLEQRTDNSLEKMMGDSKIDYAGALTLLLRLRQCCNHPDLVR 682 >gi|291239125|ref|XP_002739475.1| PREDICTED: kismet-like, partial [Saccoglossus kowalevskii] Length = 1069 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/233 (12%), Positives = 72/233 (30%), Gaps = 39/233 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 K Y + L + N + ++ + N + + + Sbjct: 36 KYYRAILERNFSFLAKGSGSNANVPNLMNTMMELRKCCNHPFLINGAEEQIMLDFPENNY 95 Query: 53 ----------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--- 97 K+ ++ ++ K +++ L L+ Q R + Sbjct: 96 LRQLLALIQSAGKMVLIDKLLPKLKEGGHKVLIFSQMVKCLDILEDYLLQKRYPYERIDG 155 Query: 98 -------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I +++ + + G G+NL + ++ F W+ + Sbjct: 156 RVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN----- 209 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G + V VY LI +N+ + + R K + +L +++ + Sbjct: 210 DLQAQARCHRIGQSKLVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMRHQ 262 >gi|62319947|dbj|BAD94038.1| pseudogene [Arabidopsis thaliana] Length = 1221 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 72/229 (31%), Gaps = 34/229 (14%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + DL + + V+ + N ++ H Sbjct: 873 QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKLD 932 Query: 51 ---VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + K+ L+ ++ + +++ L L + + Sbjct: 933 KIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAE 992 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + +V F W+ + + + Sbjct: 993 LRQQAMDHFNAPASDDFCFLLSTRAGGLGINL-ATADTVVIFDSDWNPQN-----DLQAM 1046 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1047 SRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEG 1095 >gi|302421718|ref|XP_003008689.1| chromodomain-helicase-DNA-binding protein [Verticillium albo-atrum VaMs.102] gi|261351835|gb|EEY14263.1| chromodomain-helicase-DNA-binding protein [Verticillium albo-atrum VaMs.102] Length = 1710 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 69/198 (34%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEKAN--AAPIIVAY 75 ++ + Y + + K+ LE+++ K +++ Sbjct: 1085 LMQLRKCLCHPFIYSQAIEERSDDPIVTQRNLISASAKLLLLEIMLPKLKERGHRVLLFS 1144 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F + L ++ + I +N P+ + G G+ Sbjct: 1145 QFLNQLDIVEDYLTGRGYDFRRLDGSISSLEKQRRIDAFNAPDSPVFAFLLSTRAGGVGI 1204 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + + ++R + G K V + L+ +N+++E ++Q Sbjct: 1205 NL-ATADTVIILDPDFNPHQ-----DLQALSRAHRIGQKNKVLCFQLMTKNSVEEKIMQI 1258 Query: 184 LRTKSTIQDLLLNALKKE 201 R K + +L+ ++ E Sbjct: 1259 GRKKMALDHVLIESMDNE 1276 >gi|238489253|ref|XP_002375864.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus flavus NRRL3357] gi|220698252|gb|EED54592.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus flavus NRRL3357] Length = 819 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 81/219 (36%), Gaps = 26/219 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKA 58 + +R L + + + ++ N + + + V K+ Sbjct: 525 EEIERAKTFKLAKQEVAQKKMQNPVMQARLACNSPHNFYWPWNDEPVDESLITASGKMLL 584 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT------------LDKDPCTIQEW 104 L+ ++ + AN I++ F S L LQ Q R+ D+ Sbjct: 585 LDRLVARLLANGHKILIFSQFKSQLDILQDWATQLRSWNCCRIDGAISQTDRRDQIKAFN 644 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+NL + ++ F W+ ++ + R + G R Sbjct: 645 TDPDYKIFLLSTRAGGQGINLMA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTRP 698 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 699 VIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFKSL 737 >gi|17569817|ref|NP_510140.1| CHromoDomain protein family member (chd-3) [Caenorhabditis elegans] gi|6165993|sp|Q22516|CHD3_CAEEL RecName: Full=Chromodomain-helicase-DNA-binding protein 3 homolog; Short=CHD-3 gi|3875165|emb|CAA91798.1| C. elegans protein T14G8.1, confirmed by transcript evidence [Caenorhabditis elegans] gi|3879819|emb|CAA91810.1| C. elegans protein T14G8.1, confirmed by transcript evidence [Caenorhabditis elegans] gi|11095331|gb|AAG29837.1| CHD-3 [Caenorhabditis elegans] Length = 1787 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 27/224 (12%), Positives = 66/224 (29%), Gaps = 34/224 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + ++ + N + E Sbjct: 874 KYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGS 933 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 + K L+ ++ K +++ L L+ T Sbjct: 934 ALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQ 993 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I +N + + G G+NL + ++ + W+ + Sbjct: 994 QRQDAIDRYNAPGAKQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1047 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G K V +Y + + +++E + + K + L++ A Sbjct: 1048 SRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRA 1091 >gi|328769968|gb|EGF80011.1| hypothetical protein BATDEDRAFT_35332 [Batrachochytrium dendrobatidis JAM81] Length = 2044 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 7/120 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + K + ++N + I +L G GLNL G + ++F Sbjct: 1855 KHMPSVTYMRLDGTTDGIKRHELVTKFNQDPSIDVLLLTTHVGGLGLNLT-GADTVIFVE 1913 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G KR V VY LI + T++E ++ + K + ++N Sbjct: 1914 HDWNP-----MKDLQAMDRVHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLNLASSVIN 1968 >gi|31874139|emb|CAD97978.1| hypothetical protein [Homo sapiens] gi|190689855|gb|ACE86702.1| helicase, lymphoid-specific protein [synthetic construct] gi|190691223|gb|ACE87386.1| helicase, lymphoid-specific protein [synthetic construct] Length = 822 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 548 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 607 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 608 MTSMLDILMDYCHLRDFNFSRLNGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 667 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 668 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 721 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 722 AKRKLEKLIIH 732 >gi|118092730|ref|XP_421626.2| PREDICTED: similar to proliferation-associated SNF2-like protein [Gallus gallus] Length = 822 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 64/191 (33%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEE----------KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 547 MMLLRKCCNHPYLIEYPLDPATQQFKVDEDLVKNSGKFLLLDRMLPELKKRGHKVLMFSQ 606 Query: 77 FNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 L L D++ Q N+ ++ L + G G+NL Sbjct: 607 MTMMLDILMDYCYLRGFKFSRLDGSMSYSDREENMHQFNNDPEVFLFLVSTRAGGLGINL 666 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 667 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 720 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 721 AKRKLEKLIIH 731 >gi|67969780|dbj|BAE01238.1| unnamed protein product [Macaca fascicularis] Length = 489 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 84/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L+ + + +S T +L N ++ +E Sbjct: 164 ELYKRFLRQAKPAEELREGKMSVSSLSSITS-LKKLCNHPALIHDKCVEEEDGFVGALDL 222 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 223 FPPGYSSKALEPQLSGKMLVLDYILAVTRSCSSDKVVLVSNYTRTLDLFEKLCRARRYLY 282 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 283 VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 341 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 342 -----DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 390 >gi|315053993|ref|XP_003176371.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS 118893] gi|311338217|gb|EFQ97419.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS 118893] Length = 831 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 18/177 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---- 90 ++NG E K W + + I + I++ ++ L ++ Sbjct: 568 VSNGRRGDREVKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYG 627 Query: 91 ------GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + K + ++N+ + + G G+NL G N LV F W+ Sbjct: 628 CIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPA 686 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q + R + G + FVY IA TI+E + QR K ++ ++++ + Sbjct: 687 ADQ-----QALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 738 >gi|148232962|ref|NP_001086442.1| helicase, lymphoid-specific [Xenopus laevis] gi|66911167|gb|AAH97562.1| HELLS protein [Xenopus laevis] Length = 838 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 64/194 (32%), Gaps = 29/194 (14%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 567 MMLLRKCCNHPYLIEYPLDPLTQNFKIDEELVNSSGKFLLLDRLLPEMKKRGHKVLIFSQ 626 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + ++ +N + + + + G G+NL Sbjct: 627 MTMMLDILMDYCYYKKFNFCRLDGSMSYTDREENMRSFNTDPDVFIFLVSTRAGGLGINL 686 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G R V VY L+ NTID+ +++R Sbjct: 687 TA-ADTVIIYDSDWNPQA-----DLQAQDRCHRIGQTRPVVVYRLVTANTIDQKIVERAA 740 Query: 186 TKSTIQDLLLNALK 199 K ++ L+++ K Sbjct: 741 AKRKLEKLVIHKNK 754 >gi|229914880|gb|ACQ90605.1| SWI/SNF helicase-like protein [Eutrema halophilum] Length = 768 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K + L ++ K + +++ + S L L+ + Sbjct: 592 SAKCRTLAELLPSMKQSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTI 651 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N K I + G GLNL G + ++ + ++ + I+R R + Sbjct: 652 VDTFNNDKSIFACLLSTRAGGQGLNLT-GADTVIIHDMDFNPQ-----IDRQAEDRCHRI 705 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V ++ L+ ++T+DE + + + K + +L + Sbjct: 706 GQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLES 743 >gi|254576891|ref|XP_002494432.1| ZYRO0A01342p [Zygosaccharomyces rouxii] gi|238937321|emb|CAR25499.1| ZYRO0A01342p [Zygosaccharomyces rouxii] Length = 1343 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 69/196 (35%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE------KIKALEVII------EKANAAPIIVAY 75 K ++ ++ N +DE + + ++ ++ KA+ +++ + Sbjct: 751 KIMQLRKICNHPFVFDEVESVINPSRQNTPLLYRVAGKFELLDRVLPKFKASGHRVLMFF 810 Query: 76 HFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 + + + ++E+N + G GL Sbjct: 811 QMTQVMDIMEDFLRLRDHKYMRLDGATKTEDRQEMLREFNAENSDYFCFLLSTRAGGLGL 870 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K V + LI ++++E++L+R Sbjct: 871 NLQS-ADTVIIFDTDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 924 Query: 184 LRTKSTIQDLLLNALK 199 K I ++ A K Sbjct: 925 AMQKLDIDGKVIQAGK 940 >gi|109090004|ref|XP_001095698.1| PREDICTED: lymphoid-specific helicase isoform 13 [Macaca mulatta] Length = 837 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 563 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 622 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 623 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNMDPEVFIFLVSTRAGGLGINL 682 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NT+D+ +++R Sbjct: 683 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTVDQKIVERAA 736 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 737 AKRKLEKLIIH 747 >gi|1495708|emb|CAA66380.1| RAD54 [Mus musculus] Length = 747 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 84/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L+ + + +S T +L N ++ +E Sbjct: 422 ELYKRFLRQAKPEEELREGKMSVSSLSSITS-LKKLCNHPALIYDKCVAEEDGFEGTLGI 480 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 481 FPPGYNSKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYLY 540 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 541 VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 599 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 600 -----DEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 648 >gi|327271626|ref|XP_003220588.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Anolis carolinensis] Length = 2660 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 28/237 (11%), Positives = 67/237 (28%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + + L N + ++ + N + + K + Sbjct: 687 KYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 746 Query: 60 EVIIEKAN----------------------AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 + + + +++ L L+ Q R + Sbjct: 747 DALDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 806 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 807 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 863 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 864 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 917 >gi|307182228|gb|EFN69559.1| Chromodomain-helicase-DNA-binding protein 1 [Camponotus floridanus] Length = 1831 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 70/222 (31%), Gaps = 38/222 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE- 60 K Y ++ G + + ++ + N A + +E + Sbjct: 713 KNYDALRK-------GMKGSSSTFLNIVIELKKCCNHAFLTKPNEAEREKGNGDYLQTLI 765 Query: 61 ------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 ++ + +++ L L + + + Sbjct: 766 RGSGKLVLLDKLLVRLRDTGHRVLIFSQMVKMLDILSEYLQKRHFPFQRLDGSIKGELRK 825 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL + ++ F W+ + + R Sbjct: 826 QALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQARA 879 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +N+++E +++R + K + L++ + Sbjct: 880 HRIGQKNKVNIYRLVTKNSVEEEIVERAKQKMVLDHLVIQRM 921 >gi|301785221|ref|XP_002928025.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like, partial [Ailuropoda melanoleuca] Length = 1114 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 713 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLS 772 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 773 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 832 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 833 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 886 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 887 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 930 >gi|225432404|ref|XP_002276907.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 3462 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 72/223 (32%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYD----EEKHWKEVH---- 52 Y K + + G A + + ++ + N E + H Sbjct: 1339 AYQKLLMKRVEENLGSIGSTKARSVHNSVMELRNICNHPYLSQLHADEVDNLIPKHFLPP 1398 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ ++ K ++ L +++ + Sbjct: 1399 VVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEEYLHWKQYRYLRLDGHTSGGD 1458 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I+++N+ P + + G G+NLQ + ++ F W+ + ++ Sbjct: 1459 RGALIEQFNQPDSPYFIFLLSIRAGGVGVNLQA-ADTVIIFDTDWNPQ-----VDLQAQA 1512 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V L T++E V K + + + A Sbjct: 1513 RAHRIGQKRDVLVLRLETVQTVEEQVRASAEHKLGVANQSITA 1555 >gi|198428806|ref|XP_002129178.1| PREDICTED: similar to helicase, lymphoid-specific [Ciona intestinalis] Length = 936 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 77/215 (35%), Gaps = 29/215 (13%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE----------KHWKEVHDEKIK 57 +RE E++ + ++ ++ + N K++ Sbjct: 658 EREDRMTYDDESVVNVSLSNLMMQLRKCCNHPYLIKYPLIPGTDIFRVDEELISSSGKLQ 717 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ K I++ S L L+ + I E+N Sbjct: 718 LLDRMLPVLKKKGHKILLFSQMTSLLDILEDFCNFRNHSYVRLDGSTKCEVRQERIDEYN 777 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + + G G+NL + +V + W+ + + R + G R+ Sbjct: 778 RDPDLFIFLLSTRAGGLGINLTS-ADTVVIYDSDWNPQN-----DLQAQDRCHRIGQTRS 831 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V +Y ++ NT+D+ +++R K ++ +++N K Sbjct: 832 VLIYRFVSSNTVDQFMVERAEAKRVLERMIINRNK 866 >gi|290994049|ref|XP_002679645.1| predicted protein [Naegleria gruberi] gi|284093262|gb|EFC46901.1| predicted protein [Naegleria gruberi] Length = 1001 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 65/187 (34%), Gaps = 25/187 (13%) Query: 29 TVKCLQLANGAVYYDE-------EKHWKEVHDEKI--KALEVIIEKANAAPIIVAYHFNS 79 + + + ++ E + K+ + K +++ Sbjct: 430 LMSLRKCCDHPYMFEGAEEEPFVEGEHIVNNSGKMIILDKLLKKLKQEGHKVLIFSQMTQ 489 Query: 80 DLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 L LQ F ++ I+ + + + + + G GLNL Sbjct: 490 MLDILQDYFSFRKWNYERLDGSVRGEERFEAIKSFTDKDVFVFLLSTRAGGVGLNLTS-A 548 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F + + + ++ R + G + V VY L+ +++++E++L+R K Sbjct: 549 DTVIFMDMDMNPQ-----MDLQAQARCHRIGQDKPVTVYRLVTESSVEEVILKRSMKKIA 603 Query: 190 IQDLLLN 196 + ++ Sbjct: 604 LSINTID 610 >gi|164660548|ref|XP_001731397.1| hypothetical protein MGL_1580 [Malassezia globosa CBS 7966] gi|159105297|gb|EDP44183.1| hypothetical protein MGL_1580 [Malassezia globosa CBS 7966] Length = 999 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 80/221 (36%), Gaps = 30/221 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------V 51 + Y Y L G + F+ + V+ + +N +D + + Sbjct: 558 RMYKAILTRNYSLLSGSHSTQFSLLNIAVELKKASNHPYLFDGVETPTNSREETLRGLIM 617 Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 H K+ L+ ++ KA+ +++ L L + + Sbjct: 618 HSGKMVLLDKLLARLKADNHRVLIFSQMVHMLDILSDYLSLRGYVHQRLDGTVSSDTRKR 677 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + P + G G+NL + ++ F W+ + + ++R Sbjct: 678 AIDHFNAPQSPDFCFLLSTRAGGLGINL-ETADTVIIFDSDWNPQN-----DLQAMSRAH 731 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + K + V+ + + T++E VL+R + K ++ ++N + Sbjct: 732 RLNSKFHINVFRFLTKGTVEEDVLERAKQKMGLEYAIINQM 772 >gi|171906595|ref|NP_033041.3| DNA repair and recombination protein RAD54-like [Mus musculus] gi|171906597|ref|NP_001116430.1| DNA repair and recombination protein RAD54-like [Mus musculus] gi|171906599|ref|NP_001116431.1| DNA repair and recombination protein RAD54-like [Mus musculus] gi|51316197|sp|P70270|RAD54_MOUSE RecName: Full=DNA repair and recombination protein RAD54-like; AltName: Full=RAD54 homolog; Short=mHR54; Short=mRAD54 gi|123244614|emb|CAM20670.1| RAD54 like (S. cerevisiae) [Mus musculus] gi|123253898|emb|CAM22667.1| RAD54 like (S. cerevisiae) [Mus musculus] gi|148698674|gb|EDL30621.1| RAD54 like (S. cerevisiae) [Mus musculus] Length = 747 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 84/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L+ + + +S T +L N ++ +E Sbjct: 422 ELYKRFLRQAKPEEELREGKMSVSSLSSITS-LKKLCNHPALIYDKCVAEEDGFEGTLGI 480 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 481 FPPGYNSKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYLY 540 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 541 VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 599 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 600 -----DEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 648 >gi|302844141|ref|XP_002953611.1| hypothetical protein VOLCADRAFT_118418 [Volvox carteri f. nagariensis] gi|300261020|gb|EFJ45235.1| hypothetical protein VOLCADRAFT_118418 [Volvox carteri f. nagariensis] Length = 1130 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 20/176 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----- 89 +G + + KIK L+ ++ K + +++ + + L L+ Sbjct: 782 SGLLESYILPEDSVLCSAKIKHLDELLPKLKEKGSRVLLFSQWTTVLDLLEWYMHLRGYT 841 Query: 90 -----QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G +D+ + +N + P + + G GLNL G + ++ + ++ + Sbjct: 842 YCRLDGGTQVDERLALVDAFNAPESPYFVFLLSTRAGGQGLNLT-GADTVILHDVDFNPQ 900 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 I++ R + G R V VY LI + T+D + K + +L + Sbjct: 901 -----IDKQAEDRAHRLGQTRTVAVYRLITKGTVDSNIQAIAERKLALDHAVLTDV 951 >gi|195435393|ref|XP_002065676.1| GK15574 [Drosophila willistoni] gi|194161761|gb|EDW76662.1| GK15574 [Drosophila willistoni] Length = 1941 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 71/225 (31%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------EEKH 47 KQY+K + +G+ + ++ + N A E Sbjct: 792 KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQ 851 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L + + Sbjct: 852 TLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFSFQRLDGSIKGE 911 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 912 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 965 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 966 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 1010 >gi|119622570|gb|EAX02165.1| chromodomain helicase DNA binding protein 2, isoform CRA_d [Homo sapiens] Length = 1857 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 690 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 749 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 750 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 809 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 810 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 863 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 864 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 907 >gi|73951151|ref|XP_859429.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 14 [Canis familiaris] Length = 1809 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 708 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLS 767 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 768 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 827 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 828 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 881 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 882 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 925 >gi|301619518|ref|XP_002939139.1| PREDICTED: TATA-binding protein-associated factor 172 [Xenopus (Silurana) tropicalis] Length = 1693 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 82/258 (31%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRE--------------LYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + L + + ++A + +L N Sbjct: 1372 VQLYEDFAKSRAKTDIDETVSTTSLIEENEKPKVKATGHVFQALQYLRKLCNHPALVLTT 1431 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 1432 QHPEYKKISEQLGVQNSSLRDIQHAPKLSALKQLLLDCGLGNGGTAESGTEAVVAQHRIL 1491 Query: 73 VAYHFNSDLARLQKAFPQGR-------------TLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L +++ + + + +N + I +L Sbjct: 1492 IFCQLKSMLDIVEQDLLKPHLPSVTYLRLDGTIPAGQRHSIVSRFNNDPSIDVLLLTTHV 1551 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1552 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1605 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K +I + +++ Sbjct: 1606 KIMGLQKFKMSIANTVIS 1623 >gi|195128581|ref|XP_002008741.1| GI13663 [Drosophila mojavensis] gi|193920350|gb|EDW19217.1| GI13663 [Drosophila mojavensis] Length = 1992 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS---------KTVKCLQLANGAVYYDE--------EKHW 48 Q++ Y + +N EA NS S + + N + Sbjct: 973 AMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSGSEDAPTSAGGI 1032 Query: 49 KEVHD-----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 E++ K+ L ++++ A +++ L L+ + + Sbjct: 1033 YEINSLTKAAGKLVLLSKMLKQLKAQGHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGS 1092 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + + G G+NL + ++ + W+ + Sbjct: 1093 ITGTVRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1146 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1147 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1192 >gi|158259161|dbj|BAF85539.1| unnamed protein product [Homo sapiens] Length = 1049 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|119489243|ref|XP_001262873.1| SNF2 family helicase/ATPase (Swr1), putative [Neosartorya fischeri NRRL 181] gi|119411031|gb|EAW20976.1| SNF2 family helicase/ATPase (Swr1), putative [Neosartorya fischeri NRRL 181] Length = 1695 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 11/179 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + K + D K +I + + F + Sbjct: 1362 RLSIAFPDKRLLQYDCGKLQRLD----KLLRDLKAGGHRALIFTQMTKMLDILEQFLNIH 1417 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N + +I + S G G+NL G + ++F+ L W+ Sbjct: 1418 GHRYLRLDGTTKVEQRQILTDRFNNDDRILVFILSSRSGGLGINLT-GADTVIFYDLDWN 1476 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y +++ TI+ +L++ K + D+++ + Sbjct: 1477 PA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQEGE 1530 >gi|259147128|emb|CAY80381.1| Sth1p [Saccharomyces cerevisiae EC1118] Length = 1359 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 66/196 (33%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE------KIKALEVII------EKANAAPIIVAY 75 K ++ ++ N +DE + ++ ++ KA+ +++ + Sbjct: 755 KIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFF 814 Query: 76 H----------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 F ++ + +N + G GL Sbjct: 815 QMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNVFNAPDSDYFCFLLSTRAGGLGL 874 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K V + LI ++++E++L+R Sbjct: 875 NLQT-ADTVIIFDTDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 928 Query: 184 LRTKSTIQDLLLNALK 199 K I ++ A K Sbjct: 929 AMQKLDIDGKVIQAGK 944 >gi|261197277|ref|XP_002625041.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis SLH14081] gi|239595671|gb|EEQ78252.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis SLH14081] Length = 1542 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 82/235 (34%), Gaps = 41/235 (17%) Query: 2 KQYH-------KFQRELYCDLQGENIEAF---NSASKTVKCLQLANGAVYYDEEKHWKEV 51 K Y + + ++ G ++ N + ++ + Y + + + Sbjct: 935 KLYKSILAKNPQLIQSIFKKTPGGTLKRTEHHNLNNILMQLRKCLCHPFVYSKAIEERAI 994 Query: 52 H-----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K++ LE+++ K +++ F +L ++ L + Sbjct: 995 SAALSHRNLVEASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVVEDFLDGLGLLHRRL 1054 Query: 98 ---------PCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I ++N P S G G+NL + ++ ++ + Sbjct: 1055 DGSMSSLQKQKQIDDFNAPDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQ--- 1110 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + ++R + G ++ V V+ L+ + + +E ++Q + K + +L+ + E Sbjct: 1111 --DIQALSRAHRIGQRKKVLVFQLVTKGSAEEKIMQIGKKKMALDQVLIEHMDAE 1163 >gi|170032260|ref|XP_001844000.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus] gi|167872116|gb|EDS35499.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus] Length = 821 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 68/225 (30%), Gaps = 39/225 (17%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK------------------ 46 + + A ++ N Sbjct: 488 ERLLTLALKHYEQSGTSAITPLQLITILKKICNHPSLISTTDSKDPDSLQNLLISQLPSW 547 Query: 47 -HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------T 93 H K+ LE ++E +++ +F+ L + Sbjct: 548 QHMGPADSGKLAILESLLEALIERREKVVIVSYFSKTLDMIAGLCEHYNYKFCRLDGATP 607 Query: 94 LDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +N I + + G GLNL G + LV F W+ + Sbjct: 608 SQDRGKLVATFNNPSSDIFIFLLSAKAGGIGLNL-VGASRLVLFDNDWNPAS-----DLQ 661 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G R VF+Y LI +I+E + QR +K+++ +++ Sbjct: 662 AMSRIWRDGQTRNVFIYRLITAFSIEEKIFQRQISKTSLSGSVVD 706 >gi|119570416|gb|EAW50031.1| helicase, lymphoid-specific, isoform CRA_f [Homo sapiens] Length = 822 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 548 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 607 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 608 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 667 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 668 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 721 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 722 AKRKLEKLIIH 732 >gi|268053983|gb|ACY92478.1| brahma-like protein [Saccoglossus kowalevskii] Length = 881 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 71/231 (30%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDE------------ 44 Y QR G + + ++ +L N + + Sbjct: 241 LYRHMQRNGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKLCNHPFMFPQIEEAFCEHLGQT 300 Query: 45 ----EKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK- 96 + K + L+ I+ K N ++ + +G + Sbjct: 301 GGIVQGADLYRSSGKFELLDRILPKLKACNHKALLFSQMTTLMTILEDYFAHRGFRYLRL 360 Query: 97 --------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +N P + + G GLNLQ + ++ F W+ + Sbjct: 361 DGTTKSDDRAKLLEMFNAPGSPYNIFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ--- 416 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 417 --DLQAQDRAHRIGQKSEVRVLRLLTVNSVEEKILAAARYKLNVDEKVIQA 465 >gi|327351572|gb|EGE80429.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis ATCC 18188] Length = 1542 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 82/235 (34%), Gaps = 41/235 (17%) Query: 2 KQYH-------KFQRELYCDLQGENIEAF---NSASKTVKCLQLANGAVYYDEEKHWKEV 51 K Y + + ++ G ++ N + ++ + Y + + + Sbjct: 935 KLYKSILAKNPQLIQSIFKKTPGGTLKRTEHHNLNNILMQLRKCLCHPFVYSKAIEERAI 994 Query: 52 H-----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K++ LE+++ K +++ F +L ++ L + Sbjct: 995 SAALSHRNLVEASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVVEDFLDGLGLLHRRL 1054 Query: 98 ---------PCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I ++N P S G G+NL + ++ ++ + Sbjct: 1055 DGSMSSLQKQKQIDDFNAPDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQ--- 1110 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + ++R + G ++ V V+ L+ + + +E ++Q + K + +L+ + E Sbjct: 1111 --DIQALSRAHRIGQRKKVLVFQLVTKGSAEEKIMQIGKKKMALDQVLIEHMDAE 1163 >gi|67517684|ref|XP_658628.1| hypothetical protein AN1024.2 [Aspergillus nidulans FGSC A4] gi|40746436|gb|EAA65592.1| hypothetical protein AN1024.2 [Aspergillus nidulans FGSC A4] Length = 866 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 74/221 (33%), Gaps = 28/221 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVH------DEKI 56 + +R L I + ++ N Y+ + + K+ Sbjct: 567 EEIERANTIKLAKREIAQKKMQNPVMQARLACNSPHNFYWPWAEDPSSIDETLVTASGKM 626 Query: 57 KALEVIIEK--ANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQE 103 L+ +I I++ F + + I+ Sbjct: 627 LLLDRLIPCLLNKGHKILIFSQFKTQLDILQDWATHLRSWNCCRIDGAISQADRQAQIKA 686 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + G G+NL + ++ F W+ ++ + R + G Sbjct: 687 FNTDKDYKIFLLSTRAGGQGINLVA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQT 740 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 741 KPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFKSL 781 >gi|50288627|ref|XP_446743.1| hypothetical protein [Candida glabrata CBS 138] gi|49526051|emb|CAG59670.1| unnamed protein product [Candida glabrata] Length = 1354 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE----------KIKALEVIIEKAN--AAPIIVAY 75 K ++ ++ N +DE + K + L+ I+ K +++ + Sbjct: 738 KIMQLRKICNHPFVFDEVEAVVNPSRGNSDLLYRVAGKFELLDRILPKFKATGHRVLIFF 797 Query: 76 H----------FNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGL 123 F + ++E+N + + G GL Sbjct: 798 QMTQVMDIMEDFLRMRDLKYMRLDGSTKAEDRNDMLKEFNVENSEYFCFLLSTRAGGLGL 857 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K V + LI ++++E++L+R Sbjct: 858 NLQS-ADTVIIFDTDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 911 Query: 184 LRTKSTIQDLLLNALK 199 K I ++ A K Sbjct: 912 AMQKLDIDGKVIQAGK 927 >gi|226874878|ref|NP_001152878.1| TATA-binding protein-associated factor 172 [Danio rerio] gi|220678558|emb|CAX13537.1| novel protein similar to H.sapiens BTAF1, BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) (BTAF1) [Danio rerio] gi|220679212|emb|CAX14073.1| novel protein similar to H.sapiens BTAF1, BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) (BTAF1) [Danio rerio] Length = 1858 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 79/258 (30%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + + I + +L N Sbjct: 1536 VQLYEDFAKSRAKVNVDDVISTASTQEDEEKPKLKATGHVFQALQYLRKLCNHPALVLTP 1595 Query: 46 KHWKEVH-----------------DEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ ++ Sbjct: 1596 QHPEYKHITEQLSTQHSSLRDIQHAPKLSALKQLLLDCGLGSAGASDSGTEAVVAQHRVL 1655 Query: 73 VAYHFNSDLARLQK----AFPQGRTLDK---------DPCTIQEWN-EGKIPLLFAHPAS 118 + S L +++ G T + + +N + I +L Sbjct: 1656 IFCQLKSMLDIVEQDLLKPQLPGVTYLRLDGSVQAGLRHSIVSRFNNDPSIDVLLLTTHV 1715 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 1716 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 1769 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K TI + +++ Sbjct: 1770 KIMGLQKFKMTIANTVIS 1787 >gi|194038394|ref|XP_001926393.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Sus scrofa] Length = 1828 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|157132188|ref|XP_001662505.1| helicase [Aedes aegypti] gi|108871256|gb|EAT35481.1| helicase [Aedes aegypti] Length = 1372 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 64/157 (40%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCT 100 K+ L+ ++ KA +++ + L++ + + Sbjct: 1123 GKLAVLDSLLTRLKAQGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMV 1182 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N I + + G G+NL + ++F+ W+ +++ + R + G Sbjct: 1183 ADFQNRADIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAHRLG 1236 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY LI + TI+E +LQR R KS IQ ++++ Sbjct: 1237 QTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISG 1273 >gi|20987234|gb|AAH21643.1| RAD54 like (S. cerevisiae) [Mus musculus] Length = 747 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 84/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L+ + + +S T +L N ++ +E Sbjct: 422 ELYKRFLRQAKPEEELREGKMSVSSLSSITS-LKKLCNHPALIYDKCVAEEDGFEGTLGI 480 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 481 FPPGYNSKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYLY 540 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 541 VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 599 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 600 -----DEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 648 >gi|73951145|ref|XP_859323.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 11 [Canis familiaris] Length = 1820 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|73946639|ref|XP_860267.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 18 [Canis familiaris] Length = 1555 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 72/228 (31%), Gaps = 39/228 (17%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + Sbjct: 963 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEVTMRPCPGPL 1022 Query: 53 ---------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------G 91 K + L+ I+ K A +++ S + ++ F Sbjct: 1023 CNPDLLYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGT 1082 Query: 92 RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + ++++NE + + G GLNLQ + +V F W+ + + Sbjct: 1083 TKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----D 1136 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 LQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1184 >gi|34526499|dbj|BAC85127.1| FLJ00266 protein [Homo sapiens] Length = 1544 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 22 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 81 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 82 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 141 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 142 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 198 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 199 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 251 >gi|114631897|ref|XP_001150864.1| PREDICTED: helicase, lymphoid-specific isoform 4 [Pan troglodytes] Length = 822 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 548 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 607 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 608 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 667 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 668 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 721 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 722 AKRKLEKLIIH 732 >gi|114558614|ref|XP_513683.2| PREDICTED: transcription termination factor, RNA polymerase II [Pan troglodytes] Length = 1162 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/238 (12%), Positives = 65/238 (27%), Gaps = 67/238 (28%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------------------- 52 + S+ ++ Q E+ Sbjct: 912 STVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSALTLSELRDSEPSST 971 Query: 53 ----------------------DEKIKALEVIIEKANAAPIIVAYHFNSDLA-------- 82 + LE I + + ++ + + L Sbjct: 972 VSLNGTFFKMELFEGMRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKK 1031 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 1032 RGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1090 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q +RI + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1091 NPSLEDQACDRI-----YRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1143 >gi|19577362|emb|CAD28443.1| possible swi2/snf2-like protein [Aspergillus fumigatus] Length = 858 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 77/221 (34%), Gaps = 28/221 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVH------DEKI 56 + +R L + I + ++ N Y+ + K+ Sbjct: 559 EEIERANTIKLAKKEIAQKKLQNPVMQARLACNSPHNFYWPWSDDPAAIDETLVTASGKM 618 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE 103 L+ ++ I++ F + L LQ Q + I+ Sbjct: 619 LLLDRLVPCLLKKGHKILIFSQFKTQLDILQDWATQLRGWNCCRIDGAISQTDRQAQIKA 678 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + G G+NL + ++ + W+ ++ + R + G Sbjct: 679 FNSDPGYKIFLLSTRAGGQGINLVA-ADTVILYDSDWNPQQ-----DLQAQDRAHRIGQT 732 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V VY L + T+++ +L++ +K ++ L++ K ++ Sbjct: 733 KPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFRSL 773 >gi|70995832|ref|XP_752671.1| SNF2 family helicase/ATPase PasG [Aspergillus fumigatus Af293] gi|42820703|emb|CAF32016.1| possible swi2/snf2-like protein [Aspergillus fumigatus] gi|66850306|gb|EAL90633.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus fumigatus Af293] gi|159131425|gb|EDP56538.1| SNF2 family helicase/ATPase PasG, putative [Aspergillus fumigatus A1163] Length = 867 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 77/221 (34%), Gaps = 28/221 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVH------DEKI 56 + +R L + I + ++ N Y+ + K+ Sbjct: 568 EEIERANTIKLAKKEIAQKKLQNPVMQARLACNSPHNFYWPWSDDPAAIDETLVTASGKM 627 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE 103 L+ ++ I++ F + L LQ Q + I+ Sbjct: 628 LLLDRLVPCLLKKGHKILIFSQFKTQLDILQDWATQLRGWNCCRIDGAISQTDRQAQIKA 687 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + G G+NL + ++ + W+ ++ + R + G Sbjct: 688 FNSDPGYKIFLLSTRAGGQGINLVA-ADTVILYDSDWNPQQ-----DLQAQDRAHRIGQT 741 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V VY L + T+++ +L++ +K ++ L++ K ++ Sbjct: 742 KPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFRSL 782 >gi|5733122|gb|AAD49435.1| lodestar protein [Homo sapiens] Length = 1162 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/238 (12%), Positives = 65/238 (27%), Gaps = 67/238 (28%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------------------- 52 + S+ ++ Q E+ Sbjct: 912 STVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSALTLSELRDSEPSST 971 Query: 53 ----------------------DEKIKALEVIIEKANAAPIIVAYHFNSDLA-------- 82 + LE I + + ++ + + L Sbjct: 972 VSLNGTFFKMELFEGMRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKK 1031 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 1032 HGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1090 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q +RI + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1091 NPSLEDQACDRI-----YRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1143 >gi|322790023|gb|EFZ15099.1| hypothetical protein SINV_15320 [Solenopsis invicta] Length = 3700 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 71/176 (40%), Gaps = 19/176 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR 92 +++ + + + K+++L+ ++ K + +++ L L+ Sbjct: 1534 ISSHMLTQFPDPRLIQYDCGKLQSLDCLLRKLKSGNHRVLIFTQMTRMLDVLEAFLNFHG 1593 Query: 93 TLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + ++ +N + +I S G G+NL G + ++F+ W+ Sbjct: 1594 HIYLRLDGTTRVDQRQILMERFNGDKRIFCFILSTRSGGVGVNLT-GADTVIFYDSDWNP 1652 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ R + G R V +Y L+++ T++E +L++ K + DL + Sbjct: 1653 T-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTVEENILKKANQKRLLGDLAIEG 1703 >gi|149691012|ref|XP_001488063.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 1 [Equus caballus] Length = 1828 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|5917753|gb|AAD56021.1|AF181824_1 chromodomain helicase DNA binding protein 1 [Aegolius funereus] Length = 918 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + Sbjct: 345 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQH 404 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 405 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFRRLDGSIKGEL 464 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 465 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 518 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 519 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 562 >gi|67483974|ref|XP_657207.1| helicase [Entamoeba histolytica HM-1:IMSS] gi|56474451|gb|EAL51818.1| helicase, putative [Entamoeba histolytica HM-1:IMSS] Length = 955 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 78/217 (35%), Gaps = 27/217 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------EKHWKEVHDEKI 56 Y K + G+ I + + ++ + + K+ Sbjct: 350 YRKVLMGDVTVIIGDKIVKSKLNNTMTQLRKVCDHPYLMPGAEPEPYVNGEHLCLSSAKM 409 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP-CTIQEW 104 +E ++EK N I++ L + + G+T +D I+++ Sbjct: 410 IVMEKLVEKHLKNNGKILIFSQMTRMLDIIDDYLVFKDIEHYRIDGQTQQEDRVEQIKDF 469 Query: 105 NEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + S G G+NLQ + ++ + W+ + + + R + G Sbjct: 470 NDPNGKVSIFLLSTRSGGLGINLQS-ADTVILYDSDWNPQS-----DIQAMDRAHRIGQT 523 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V VY LI + T ++ +++ K + L++ + K Sbjct: 524 KPVTVYRLICEGTAEQRLIRVAERKLMLNRLVMQSGK 560 >gi|327348692|gb|EGE77549.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ATCC 18188] Length = 1072 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 18/168 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQGRTLD----- 95 DE + + KI+ L I++K + IV F S L +++ Sbjct: 823 DDEPETPDHLASTKIRHLMKILKKESGDYKFIVFSFFTSMLNKIEPFLKDSHIGYARYDG 882 Query: 96 ------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ + N K +L + GLNL + +V +W+ +E Sbjct: 883 AMRNDLREHSLDRLRNSPKTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVE 936 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + V +Y L + T++E ++ K + + + Sbjct: 937 EQAIDRVHRLNQTVDVKIYKLTIKGTVEERIVDLQERKRELANATIEG 984 Score = 39.0 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 16/43 (37%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + + L + G+NI ++ ++ Q N Sbjct: 569 YKRLEQRTDKTLERMIGGDNINYASALVLLLRLRQACNHPDLV 611 >gi|255077555|ref|XP_002502414.1| SNF2 super family [Micromonas sp. RCC299] gi|226517679|gb|ACO63672.1| SNF2 super family [Micromonas sp. RCC299] Length = 1050 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 66/205 (32%), Gaps = 18/205 (8%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKAN 67 E + + A + + + A+ + + + + Sbjct: 572 DEAREKFEKARVVARAALGEDAHLVGGADHPDMDFARLGDATNCGKLLALEKLLSLWHRQ 631 Query: 68 AAPIIVAY----------HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI-PLLFAHP 116 +++ F + + + ++N + + Sbjct: 632 RDKVLLFSTSARLLTVLEKFLTQRGYVYARLDGSTAGKDRQKLVDDFNASESLFVFLLST 691 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+ N +V F W+ + + R + G +R V VY L+A TI Sbjct: 692 GAGGVGLNITS-ANRVVIFDPNWNPAK-----DAQAQDRAYRIGQRRDVDVYRLLAAGTI 745 Query: 177 DELVLQRLRTKSTIQDLLLNALKKE 201 +E+V QR K ++ ++A K+ Sbjct: 746 EEMVYQRQVYKQQQSNVAVDASKER 770 >gi|241953595|ref|XP_002419519.1| ISWI chromatin-remodeling complex ATPase, putative [Candida dubliniensis CD36] gi|223642859|emb|CAX43114.1| ISWI chromatin-remodeling complex ATPase, putative [Candida dubliniensis CD36] Length = 1054 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 80/228 (35%), Gaps = 39/228 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 Q E Y L ++I+A N + ++ + N + Sbjct: 384 DMQVEWYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 443 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ ++ KA + +++ + L L+ + Sbjct: 444 EHLVYNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFREYEYCRIDGSTSH 503 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N + + G G+NL +I++ + W+ + + Sbjct: 504 EDRIEAIDEYNAPNSDKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQA 557 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G K+ V V+ + + I+E VL+R K + L++ ++ Sbjct: 558 MDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQQGRQ 605 >gi|126276965|ref|XP_001365054.1| PREDICTED: similar to chromodomain helicase DNA binding protein 2 [Monodelphis domestica] Length = 1836 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 733 KQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 792 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 793 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 852 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 853 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 906 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 907 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 950 >gi|73951139|ref|XP_859203.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 8 [Canis familiaris] Length = 1839 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 711 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLS 770 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 771 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 830 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 831 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 884 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 885 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 928 >gi|239606660|gb|EEQ83647.1| chromatin remodeling complex subunit [Ajellomyces dermatitidis ER-3] Length = 1542 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 82/235 (34%), Gaps = 41/235 (17%) Query: 2 KQYH-------KFQRELYCDLQGENIEAF---NSASKTVKCLQLANGAVYYDEEKHWKEV 51 K Y + + ++ G ++ N + ++ + Y + + + Sbjct: 935 KLYKSILAKNPQLIQSIFKKTPGGTLKRTEHHNLNNILMQLRKCLCHPFVYSKAIEERAI 994 Query: 52 H-----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 K++ LE+++ K +++ F +L ++ L + Sbjct: 995 SAALSHRNLVEASSKLQLLEMLLPKLQERGHRVLIFSQFLDNLDVVEDFLDGLGLLHRRL 1054 Query: 98 ---------PCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I ++N P S G G+NL + ++ ++ + Sbjct: 1055 DGSMSSLQKQKQIDDFNAPDSPYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQ--- 1110 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + ++R + G ++ V V+ L+ + + +E ++Q + K + +L+ + E Sbjct: 1111 --DIQALSRAHRIGQRKKVLVFQLVTKGSAEEKIMQIGKKKMALDQVLIEHMDAE 1163 >gi|224001476|ref|XP_002290410.1| atpase-like protein [Thalassiosira pseudonana CCMP1335] gi|220973832|gb|EED92162.1| atpase-like protein [Thalassiosira pseudonana CCMP1335] Length = 873 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 28/225 (12%), Positives = 75/225 (33%), Gaps = 37/225 (16%) Query: 6 KFQRELYCDLQGENIEAFNSA---------SKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Q++ Y + ++ N+ + + ++ N +D + D Sbjct: 244 EMQQDWYKRVLRKDAHELNALGGPSHARLQNVLMHLRKVCNHPYLFDGAEQGPPFSDGPH 303 Query: 57 KAL----------EVIIEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDK 96 + KA + +++ L + +K Sbjct: 304 LWENSGKMQLLNKLLPKLKAKGSRVLIFSQMTRVLDIMEDYLRLVGHEYCRIDGNTDGEK 363 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N + G G+NL +I++ F W+ + ++ + Sbjct: 364 RDSQMEEFNAPGSSKFCFLLSTRAGGLGINL-ATADIVILFDSDWNPQ-----VDLQAMD 417 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V V+ I++ T++E +++R K + ++ + Sbjct: 418 RAHRIGQTKPVQVFRFISEGTVEEKIIERADKKLFLDAAVIQQGR 462 >gi|301607520|ref|XP_002933353.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Xenopus (Silurana) tropicalis] Length = 1809 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 74/223 (33%), Gaps = 32/223 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 KQY++ R +G + ++ + N E+ KE Sbjct: 729 KQYYRWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCFLIKPEETEKESRLDSLQSL 788 Query: 52 --HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---------- 97 K+ L+ ++ + +++ L L + + Sbjct: 789 IRSSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYPFQRLDGSIKGELR 848 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + G G+NL + +V F W+ + + R Sbjct: 849 KQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQAR 902 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 AHRIGQKKQVNIYRLVTRGTVEEDIIERAKKKMVLDHLVIQRM 945 >gi|255580599|ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] gi|223529287|gb|EEF31257.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] Length = 1718 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 28/231 (12%), Positives = 73/231 (31%), Gaps = 36/231 (15%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKH------------- 47 + Y + DL + + V+ + N ++ H Sbjct: 834 QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGFNDSSK 893 Query: 48 --WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 + K+ L+ ++ + + +++ L L + + Sbjct: 894 LERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRLLDILAEYLSLRGFQFQRLDGSTK 953 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +N + G G+NL + ++ F W+ + + Sbjct: 954 AELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQ 1007 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1008 AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEG 1058 >gi|328768321|gb|EGF78368.1| hypothetical protein BATDEDRAFT_35805 [Batrachochytrium dendrobatidis JAM81] Length = 1991 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 70/230 (30%), Gaps = 39/230 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTV---KCLQLANGAVYYDEEKHWKEV------- 51 K Y + + L+ ++ N + + + + Sbjct: 578 KWYRSILEKNFSWLKQGTLKKTNVPNLINTMIELRKCCIHPWLLKGAEDQILDELNARTN 637 Query: 52 ---------HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQ 90 K+ ++ +++K +++ L L + Sbjct: 638 EQQFNALIQSSGKMVLIDKLLKKLKQGGHKVLIFSQMTKCLDLIQDYLRSRGWLYERIDG 697 Query: 91 GRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G D +I ++ + + + G G+NL + + F W+ + Sbjct: 698 GVRGDLRQASIDRFSAPGSESFVFLLCTRAGGVGINLTA-ADTCIIFDSDWNPQN----- 751 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + +R + G K+ V +Y LI +NT + + R K + LL + Sbjct: 752 DLQAQSRCHRIGQKKPVQIYRLITRNTYEREMFDRASMKLGLDKALLQRM 801 >gi|294953115|ref|XP_002787602.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] gi|239902626|gb|EER19398.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] Length = 1191 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/260 (12%), Positives = 70/260 (26%), Gaps = 66/260 (25%) Query: 2 KQYHKFQRELYCDL-----QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 + Y L + + + ++ + N + Sbjct: 755 EIYKAVYSRNIQKLMSSGDGEKKGGGPSLINLAMELRKCCNHPFLITGVEEQLTSRLKGD 814 Query: 53 -----------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-- 97 K+ LE +I+K A ++V F L + + Sbjct: 815 QDAINQLLVSASGKMVFLEKLIDKLLAEGEKVLVFSQFTMQLDIIDDYLRARGVRFERLD 874 Query: 98 --------PCTIQEWN----------------------------EGKIPLLFAHPASCGH 121 + +N + + + G Sbjct: 875 GNVSAGDRQEAVDRFNRSTPSPSPSPSVSPSPEDEANDGVVGVDDFSSMVFLLSTKAGGV 934 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL ++ V F W+ + + + R + G + V VY L+ +NT +E + Sbjct: 935 GLNLCA-ASVAVIFDSDWNPQN-----DLQAMARCHRIGQVKNVQVYRLLTRNTYEERMF 988 Query: 182 QRLRTKSTIQDLLLNALKKE 201 K ++ +++ L+ Sbjct: 989 AVASHKLALERAVMSGLEAR 1008 >gi|295669680|ref|XP_002795388.1| chromodomain helicase hrp3 [Paracoccidioides brasiliensis Pb01] gi|226285322|gb|EEH40888.1| chromodomain helicase hrp3 [Paracoccidioides brasiliensis Pb01] Length = 1520 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 81/236 (34%), Gaps = 37/236 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--------------EE 45 ++ Y + Y L G + + + ++ + +N + E Sbjct: 706 LEYYKNILTKNYAALNQGSKGQKQSLLNIMMELKKASNHPFMFPNAESRILEGKTGREEM 765 Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 766 MRAIITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIA 825 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + G G+NL + +V F W+ + + Sbjct: 826 AGPRRLSIEHFNAPDSNDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 879 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIHV 205 + R + G + V VY L++++T++E VL+R R K ++ + + KE I + Sbjct: 880 AMARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDKEAIEL 935 >gi|255946938|ref|XP_002564236.1| Pc22g01920 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591253|emb|CAP97480.1| Pc22g01920 [Penicillium chrysogenum Wisconsin 54-1255] Length = 819 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 64/212 (30%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 521 LKAIGILKKLCNHPDLLDLANDLPGCEHAFPEDYSPPDSRGRDRDIKSWYSGKMMVLDRM 580 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K + K + +N Sbjct: 581 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNIKKRTKLVDTFNNPDG 640 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 641 QEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 694 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 695 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 726 >gi|316974864|gb|EFV58334.1| domain protein, SNF2 family [Trichinella spiralis] Length = 1667 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 85/256 (33%), Gaps = 58/256 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-ASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y +E S +L + + + + Sbjct: 1354 QAYSDEVQEKVASAAVGRESRKGITFSILTYLRKLCSHPLLVTDSEPDLMQSTLDKLHLN 1413 Query: 53 ----------DEKIKALEVIIEKAN------------------AAPIIVAYHFNSDLARL 84 K++AL+ ++ + + A ++ + S L L Sbjct: 1414 DVQQLNDISYSGKMQALKQLLSECSIGSSNLADCDAVQSNGISAHRALIFCQYKSALNLL 1473 Query: 85 QKAFPQGR--------------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 F +G ++ Q++N + I LL G GLNL G Sbjct: 1474 CTFFTRGYFGKGISFLKMDGSVEPERRQELAQQFNSDPSIDLLILTTQIGGLGLNLT-GA 1532 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 ++++FF W+ + + R + G R V VY LI+Q T++E +++ + K+ Sbjct: 1533 DVVIFFDHDWNP-----CRDIQAMDRAHRIGQTRTVNVYRLISQGTLEEKIMRFQKFKNF 1587 Query: 190 IQDLLLNALKKETIHV 205 + D ++ K + + Sbjct: 1588 MADTVIGDENKSLLSM 1603 >gi|73986602|ref|XP_867703.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 5 [Canis familiaris] Length = 1595 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 72/215 (33%), Gaps = 29/215 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKI 56 Y Q + +G N+ ++ ++ N + + K Sbjct: 1007 LYRHMQAKGAHSGKGGTKTLMNT---IMQLRKICNHPYMFQHIEADLASRLDLYRASGKF 1063 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 + L+ I+ K A +++ S + ++ F + ++ + Sbjct: 1064 ELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTF 1123 Query: 105 NEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 NE + + G GLNLQ + ++ F W+ + + R + G + Sbjct: 1124 NEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQDRAHRIGQQ 1177 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V L N+++E +L + K + ++ A Sbjct: 1178 NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1212 >gi|148227774|ref|NP_001080504.1| chromodomain helicase DNA binding protein 4 [Xenopus laevis] gi|28422180|gb|AAH46866.1| B230399n07 protein [Xenopus laevis] Length = 1893 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 66/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEKH 47 K Y + L + + + + N + + Sbjct: 975 KYYKFILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1034 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 K+ L+ ++ K + +++ L L+ G T + Sbjct: 1035 ALIKGAGKLFLLQKMLRKLKDDGHRVLIFSQMTKMLDLLEDFMEHEGYKYERIDGGITGN 1094 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + +V + W+ + Sbjct: 1095 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVVIYDSDWNP-----HNDIQAF 1148 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G R V +Y + + +++E + Q + K + L++ Sbjct: 1149 SRAHRIGQNRKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1190 >gi|12232371|ref|NP_032260.2| lymphocyte-specific helicase [Mus musculus] gi|81910423|sp|Q60848|HELLS_MOUSE RecName: Full=Lymphocyte-specific helicase; AltName: Full=Proliferation-associated SNF2-like protein gi|12002696|gb|AAG43373.1|AF155210_1 proliferation associated SNF2-like protein [Mus musculus] gi|12061562|gb|AAB08015.2| lymphocyte specific helicase [Mus musculus] gi|74151148|dbj|BAE27697.1| unnamed protein product [Mus musculus] gi|148709866|gb|EDL41812.1| helicase, lymphoid specific [Mus musculus] Length = 821 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + ++V Sbjct: 547 MMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLVFSQ 606 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + I +N + + L + G G+NL Sbjct: 607 MTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINL 666 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 667 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 720 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 721 AKRKLEKLIIH 731 >gi|198417079|ref|XP_002130103.1| PREDICTED: similar to RAD54-like [Ciona intestinalis] Length = 775 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 72/217 (33%), Gaps = 42/217 (19%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------------DE 54 + + + +L N E+ +E Sbjct: 465 KNSEGVTSGGLTAITQLKKLCNHPALIYEKCLQQESGCEDMRKIFPSNFNPKLVQPELSG 524 Query: 55 KIKALEVII---EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTI 101 K+K ++ ++ + + ++ ++ L + T+ K + Sbjct: 525 KMKLVDYLLAVTRTSTSDKFVLVSNYTQTLDLCEQLCRSRRYMFVRLDGSMTIKKRAKVV 584 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++N P + + G GLNL G N LV F W+ + + R + Sbjct: 585 EKFNNPSSPEFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN-----DEQAMARVWRD 638 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ F+Y L+ TI+E + QR K + +++ Sbjct: 639 GQKKPCFIYRLLGTGTIEEKIFQRQAHKKALSSCVVD 675 >gi|194760843|ref|XP_001962642.1| GF14337 [Drosophila ananassae] gi|190616339|gb|EDV31863.1| GF14337 [Drosophila ananassae] Length = 1891 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 71/225 (31%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------EEKH 47 KQY+K + +G+ + ++ + N A E Sbjct: 768 KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQ 827 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L + + Sbjct: 828 TLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGE 887 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 888 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 941 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 942 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 986 >gi|302915977|ref|XP_003051799.1| SNF2 family DNA-dependent ATPase domain-containing protein [Nectria haematococca mpVI 77-13-4] gi|256732738|gb|EEU46086.1| SNF2 family DNA-dependent ATPase domain-containing protein [Nectria haematococca mpVI 77-13-4] Length = 1890 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 74/237 (31%), Gaps = 55/237 (23%) Query: 9 RELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEV---------------- 51 +++ + E+ EA + +L N + Sbjct: 1574 KKIQAEAGREDKEAKQHIFQALQYMRKLCNSPAMVMKPGTPFYDDTQRILNKKGTSIEDT 1633 Query: 52 -HDEKIKALEVIIEKA-----------------NAAPIIVAYHFNSDLARLQKAF----- 88 H K+ AL ++ ++ L +Q Sbjct: 1634 QHAPKLTALRDLLVDCGIGVEGNESNDPLYQPIKPHRALIFCQMKEMLDMVQNKVLKELL 1693 Query: 89 --------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 +K + ++N + +L + G GLNL G + ++F W Sbjct: 1694 PSVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDW 1752 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++ + + R + G K+ V VY LI + T++E +L R K + ++N Sbjct: 1753 NPQK-----DLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVASTVVN 1804 >gi|156085062|ref|XP_001610014.1| SNF2 domain-containing protein / helicase domain-containing protein [Babesia bovis] gi|154797266|gb|EDO06446.1| SNF2 domain-containing protein / helicase domain-containing protein [Babesia bovis] Length = 829 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 67/199 (33%), Gaps = 24/199 (12%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEVII--EKANAAPI 71 + + + N +E+ K+K II +AN + Sbjct: 435 SKKFNSNRFLMLLTLLRKTCNHPDLVLQERPEDYGDISRSTKLKVAMDIIEKWEANGDKV 494 Query: 72 IVAYHFNSDLARLQKAFPQGR------------TLDKDPCTIQEWN-EGKIPLLFAHPAS 118 ++ L + + ++ K ++ ++ + + LL Sbjct: 495 LIFTQTIQMLDIIHDTLAKHYGQCRMARIDGEVSIKKRAKLLESFHSDENMFLLLLTTRV 554 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL N ++ F W+ + R + G R V +Y LI+ +T++E Sbjct: 555 GGVGLNLT-CANRVLIFDPDWNPMT-----DSQARERSYRIGQNRDVVIYRLISAHTVEE 608 Query: 179 LVLQRLRTKSTIQDLLLNA 197 + R K + + +L+ Sbjct: 609 KIYHRQIYKFYMSEKILSD 627 >gi|298254459|ref|ZP_06978045.1| SNF2 family protein [Streptococcus pneumoniae str. Canada MDR_19A] Length = 146 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 6/123 (4%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 DL + + +N+G+ + G GLNL G + ++ LWW Sbjct: 12 DLGLTSFKITGSTPAKERQDMTKAFNQGERDAFLISLKAGGVGLNLT-GADTVILVDLWW 70 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +E + R + G + V VY L+ + TI+E + + K + +L+ + Sbjct: 71 NPA-----VEAQAIGRAHRMGQEETVEVYRLVTKGTIEEKIQELQEQKKHLVSQVLDGTE 125 Query: 200 KET 202 Sbjct: 126 SRG 128 >gi|91090218|ref|XP_968156.1| PREDICTED: similar to E1a binding protein P400 [Tribolium castaneum] Length = 2612 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 71/179 (39%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++A+ V + + K++ L+ ++ K + +++ L L+ Sbjct: 1437 LHRIASAMVTQFPDPRLIQYDCGKLQTLDKLLRKLKSEGHRVLIFTQMTKMLDVLEAFLN 1496 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ +N + +I S G G+NL G + ++F+ Sbjct: 1497 FHGHIYLRLDGTTKVDQRQLLMERFNGDTRIFAFILSTRSGGIGVNLT-GADTVIFYDSD 1555 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y L+++ TI+E +L++ K + DL + Sbjct: 1556 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEENILKKANQKRLLGDLAIEG 1609 >gi|19113394|ref|NP_596602.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe 972h-] gi|74676047|sp|O60177|YG42_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C23E6.02 gi|3116120|emb|CAA18870.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe] Length = 1040 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 71/204 (34%), Gaps = 23/204 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +K + E +L + N Q+ + ++ + A++ II+ Sbjct: 826 NKLRTENISELLPKQYS--NILEN----RQMGMKIFTDPKHWTTSTKIEKALNAVKEIIK 879 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIPLLF 113 K I++ F S L F Q T +++ I + + +L Sbjct: 880 KQPTDKILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEVDPNVRVLL 939 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + GLNL N ++ +W+ IE V R + G + V + ++ Sbjct: 940 ISLKAGNVGLNLT-CANHVIILDPFWNP-----YIEEQAVDRAHRIGQDKPVNILRIVTN 993 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 NTI+E VL K + D L Sbjct: 994 NTIEERVLALQDRKRELIDSALGE 1017 >gi|73951125|ref|XP_849509.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 2 [Canis familiaris] gi|73951131|ref|XP_536179.2| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 1 [Canis familiaris] Length = 1827 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|73951147|ref|XP_859355.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 12 [Canis familiaris] Length = 1851 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|68483984|ref|XP_714082.1| hypothetical protein CaO19.11916 [Candida albicans SC5314] gi|68484390|ref|XP_713881.1| hypothetical protein CaO19.4437 [Candida albicans SC5314] gi|46435400|gb|EAK94782.1| hypothetical protein CaO19.4437 [Candida albicans SC5314] gi|46435612|gb|EAK94990.1| hypothetical protein CaO19.11916 [Candida albicans SC5314] Length = 859 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 78/226 (34%), Gaps = 39/226 (17%) Query: 7 FQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEKH 47 Q+ LY + ++I+A N + ++ + N + Sbjct: 216 MQKNLYQKILEKDIDAVNGANGKKESKTRLLNIVMQLRKCCNHPYLFEGVEPGPPYTTDE 275 Query: 48 WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LD 95 + +K+ L+ ++ + + +++ + L L+ Sbjct: 276 HLVYNSQKMLILDQLLKKFQQEGSRVLIFSQMSRMLDILEDYCYFREYQYCRIDGQTEHS 335 Query: 96 KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I E+N+ + + G G+NL +I++ F W+ + + + Sbjct: 336 DRINAIDEYNKPGSEKFIFLLTTRAGGLGINLTS-ADIVILFDSDWNPQA-----DLQAM 389 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V V+ I + I+E VL+R K + L++ + Sbjct: 390 DRAHRIGQTKQVKVFRFITERAIEEKVLERAAQKLRLDQLVIQQGR 435 >gi|126291802|ref|XP_001381614.1| PREDICTED: similar to chromodomain helicase DNA binding protein 6, [Monodelphis domestica] Length = 2716 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 28/237 (11%), Positives = 67/237 (28%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + + L N + ++ + N + + K + Sbjct: 706 KYYRAILEKNFSFLAKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 765 Query: 60 EVIIEKAN----------------------AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 + + + +++ L L+ Q R + Sbjct: 766 DSLDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 825 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 826 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 882 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 883 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 936 >gi|302414008|ref|XP_003004836.1| chromodomain helicase hrp3 [Verticillium albo-atrum VaMs.102] gi|261355905|gb|EEY18333.1| chromodomain helicase hrp3 [Verticillium albo-atrum VaMs.102] Length = 1326 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 75/225 (33%), Gaps = 34/225 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 ++ Y Y L + + + ++ +++N + + Sbjct: 608 LEYYKNILTRNYAALSDATGQKNSLLNIMMELKKVSNHPYMFGGAEDRVLAGSTRREDQV 667 Query: 52 -----HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 K+ L+ ++ K + +++ L L + Sbjct: 668 KGLIASSGKMMLLDQLLTKLKKDGHRVLIFSQMVKMLDILGDYLALRGYKFQRLDGTIAA 727 Query: 98 ---PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I +N + G G+NL + +V F W+ + + Sbjct: 728 GPRRMAINHFNAEGSDDFCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA-----DLQA 781 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K+ V +Y L+++ T++E VL+R R K ++ L + A Sbjct: 782 MGRAHRIGQKKPVSIYRLVSKETVEEEVLERARNKLLLEYLTIQA 826 >gi|195020242|ref|XP_001985154.1| GH16907 [Drosophila grimshawi] gi|193898636|gb|EDV97502.1| GH16907 [Drosophila grimshawi] Length = 2013 Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 71/226 (31%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEE---------KH 47 Q++ Y + +N EA NS + + + N + Sbjct: 981 AMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSASEEAPTSAGGI 1040 Query: 48 WKEVHDEKIKALEVIIEKA------NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 ++ + K V++ K +++ L L+ + + Sbjct: 1041 YELLSLTKAAGKLVLLSKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGS 1100 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + + G G+NL + ++ + W+ + Sbjct: 1101 ITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1154 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1155 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1200 >gi|45384078|ref|NP_990470.1| probable global transcription activator SNF2L2 [Gallus gallus] gi|996020|emb|CAA62832.1| BRM protein [Gallus gallus] Length = 1568 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 973 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1032 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1033 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1092 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + ++ F W+ + Sbjct: 1093 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ--- 1148 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1149 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1197 >gi|114658989|ref|XP_001170614.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 1 [Pan troglodytes] Length = 1531 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|149244356|ref|XP_001526721.1| chromo domain protein 1 [Lodderomyces elongisporus NRRL YB-4239] gi|146449115|gb|EDK43371.1| chromo domain protein 1 [Lodderomyces elongisporus NRRL YB-4239] Length = 1500 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 74/224 (33%), Gaps = 37/224 (16%) Query: 4 YHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------------ 50 Y + Y L G + + + + +N +D + Sbjct: 661 YKNIITKNYAALNAGNKGSQISLLNVMSELKKASNHPYLFDGAEERVLSRAGSYSRENVL 720 Query: 51 ----VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ LE ++ K +++ L L G Sbjct: 721 KGMVMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRMLDILGDYMSIKGYAFQRLDGGIPS 780 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +I +N + G G+NL + ++ F W+ + + Sbjct: 781 SQRRISIDHFNAPDSKDFAFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQA 834 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 835 MARAHRIGQKNQVLVYRFVSKDTVEEQILERARKKMILEYAIIS 878 >gi|328862983|gb|EGG12083.1| hypothetical protein MELLADRAFT_32790 [Melampsora larici-populina 98AG31] Length = 830 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 33/206 (16%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEE----------KHWKEVHDEKIKALEVIIEK-- 65 +++ + ++ ++ N +D K+ L+ ++ Sbjct: 546 KSVNQMKLQNVMMQLRKVCNHPWLFDWPIDPTTGTYSVGSGLITSSGKMLLLDKLLHVLF 605 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCTIQEWNE---GKIP 110 +++ F S L + ++ Sbjct: 606 DRGHKVLIFSQFTSMLDIIHDWANDLKGWKVCRIDGSTSQDERRAQMKDFNQNHGPDGCS 665 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL + ++ F W+ ++ + R + G + V V+ L Sbjct: 666 LFLLSTRAGGVGINLVA-ADTVILFDSDWNPQQ-----DLQAQDRVHRIGQTKPVLVFRL 719 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ NTI+ +LQ+ K ++ L++ Sbjct: 720 VSGNTIETKMLQKASQKRKLETLVIG 745 >gi|299115201|emb|CBN74032.1| Putative ATP-dependent helicase YFR038W [Ectocarpus siliculosus] Length = 896 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 71/215 (33%), Gaps = 32/215 (14%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------------DEK 55 R+ D+ E + + + ++ + E K K Sbjct: 521 RQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGK 580 Query: 56 IKALEVIIEKAN--AAPIIVAYHFN------SDLARLQKAFPQ-----GRTLDKDPCTIQ 102 + ++ +++K + +++ D R + LD+ + Sbjct: 581 VALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEE 640 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + K + + G G+NL + + F W+ + + + R + G + Sbjct: 641 FNSNPKFFVFLLSTRAGGLGINLCA-ADTCILFDSDWNPHQ-----DSQAMARCHRIGQQ 694 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY L+ +++ ++ + +K ++ + + Sbjct: 695 KPVMVYRLLTTGSVEIEMMAKQISKKKLERVAVQG 729 >gi|259488679|tpe|CBF88314.1| TPA: SNF2 family helicase/ATPase PasG, putative (AFU_orthologue; AFUA_1G13010) [Aspergillus nidulans FGSC A4] Length = 868 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 74/221 (33%), Gaps = 28/221 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVH------DEKI 56 + +R L I + ++ N Y+ + + K+ Sbjct: 569 EEIERANTIKLAKREIAQKKMQNPVMQARLACNSPHNFYWPWAEDPSSIDETLVTASGKM 628 Query: 57 KALEVIIEK--ANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQE 103 L+ +I I++ F + + I+ Sbjct: 629 LLLDRLIPCLLNKGHKILIFSQFKTQLDILQDWATHLRSWNCCRIDGAISQADRQAQIKA 688 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + G G+NL + ++ F W+ ++ + R + G Sbjct: 689 FNTDKDYKIFLLSTRAGGQGINLVA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQT 742 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V VY L + T+++ +L++ +K ++ L++ K +++ Sbjct: 743 KPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFKSL 783 >gi|294656433|ref|XP_002770263.1| DEHA2D05456p [Debaryomyces hansenii CBS767] gi|199431470|emb|CAR65619.1| DEHA2D05456p [Debaryomyces hansenii] Length = 838 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 74/244 (30%), Gaps = 49/244 (20%) Query: 2 KQYHKFQRE-LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------------- 45 K Y F L +L N + Sbjct: 520 KLYEYFVTSPEIKKLLKGVGSQP--LKAIGMLKKLCNHPDLLNLPDDLDGCDSLIPEDYV 577 Query: 46 ---------KHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQ--- 90 + + K LE + K I++ ++ L ++K Sbjct: 578 PAIGNGNRSREIQTWFSGKFMLLERFLHKIRTETNDKIVLISNYTQTLDLIEKMCRYKKY 637 Query: 91 -------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 ++K + +N+ + + + G G+NL G N L+ W+ Sbjct: 638 ANVRLDGTMNINKRQKLVDRFNDPEGSEFIFLLSSKAGGCGINL-IGANRLILIDPDWNP 696 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q + R + G K+ F+Y I+ TI+E + QR K ++ +++ K++ Sbjct: 697 ASDQ-----QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDE-KED 750 Query: 202 TIHV 205 + Sbjct: 751 VERL 754 >gi|312372079|gb|EFR20122.1| hypothetical protein AND_20633 [Anopheles darlingi] Length = 2227 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 64/222 (28%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--------EEKHWKEVH 52 K Y Y L A + + + + N + E+ Sbjct: 1070 KYYKYILTRNYEALNPKGGGGACSLINIMMDLKKCCNHPYLFAAAAEEATLGPGGNYELQ 1129 Query: 53 D-------EKIKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLD 95 + + + K+ +++ L + G T Sbjct: 1130 SLTKAAGKLVLLEKMLKLLKSQGHRVLIFSQMTKMLDILEDFLEGLGYKYERIDGGITGS 1189 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N P + G G+NL + ++ + W+ + Sbjct: 1190 IRQEAIDRFNAPGAPQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1243 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1244 SRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1285 >gi|45382655|ref|NP_990041.1| DNA repair and recombination protein RAD54B [Gallus gallus] gi|51316526|sp|Q9DG67|RA54B_CHICK RecName: Full=DNA repair and recombination protein RAD54B; AltName: Full=RAD54 homolog B gi|9957289|gb|AAG09308.1|AF178529_1 Rad54b [Gallus gallus] Length = 918 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 83/255 (32%), Gaps = 58/255 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDE-------------- 44 ++ Y K LQG + + +L N + Sbjct: 563 LELYRKLLSSRVISSCLQGRLENSPH-LICIGALKKLCNHPCLLFKALKEKCCDPKSDEH 621 Query: 45 ------------------EKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLA 82 + E+ K++ L ++ +++ +++ ++ L Sbjct: 622 VESSLYEGLTDVFPQDYTSDTFSEIDSGKLQVLVKLLAAIRELSSSERVVLVSNYTQTLN 681 Query: 83 -RLQKAFPQGRTLDK---------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGN 130 L+ G + + + +N P + + G GLNL G + Sbjct: 682 VLLETCKCYGYSYTRLDGNTPVSQRQQIVDSFNSKFSPAFIFLLSSKAGGVGLNL-VGAS 740 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ + + W+ + + R + G K V +Y L+ TI+E + QR +K + Sbjct: 741 HLILYDIDWNPAT-----DIQAMARVWRDGQKCTVHIYRLLTTGTIEEKIYQRQISKQDL 795 Query: 191 QDLLLNALK-KETIH 204 +++ K E IH Sbjct: 796 SGAVVDLSKTSEHIH 810 >gi|114675380|ref|XP_512384.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 [Pan troglodytes] Length = 1657 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1016 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1075 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1076 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1135 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1136 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1191 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1192 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1240 >gi|321458928|gb|EFX69988.1| hypothetical protein DAPPUDRAFT_202549 [Daphnia pulex] Length = 621 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/212 (11%), Positives = 71/212 (33%), Gaps = 31/212 (14%) Query: 13 CDLQGENIEAFNSASK--TVKCLQLANGAVYYDEE----------KHWKEVHDEKIKALE 60 D++ + N + ++ ++ N E K+ ++ Sbjct: 329 ADIEDIEAKCTNIKMQNPFMQLKKIVNHPHLVKWEIDAETGEYVVDESMVKDSGKLTVMD 388 Query: 61 VIIEK--ANAAPIIVAY----------HFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEG 107 ++ + + +++ + S L+ + + N+ Sbjct: 389 QMLTRLIKDGHKVLIFSTLTMLLDVLADYLSMRDMKFCRLDGRMNLEDRATDMDTFRNDP 448 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+ L + ++ + W+ + + R + G + V V Sbjct: 449 DTSVFLISTRAGGLGITLTS-ADTVIIYDSDWNPQ-----CDLQAQDRCHRIGQTKPVVV 502 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y L+A +T+D+ +++R K ++ L++ K Sbjct: 503 YRLVAADTVDQRIIERAGAKRKLEKLVIQKGK 534 >gi|242006444|ref|XP_002424060.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212507366|gb|EEB11322.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 1457 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G A + V+ +L N + + + H Sbjct: 899 LYRHMQSKGVLLTDGSEKGAKGKGGAKALMNTIVQLRKLCNHPFLFQQIEEKYCDHVGAA 958 Query: 53 ------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K +++ + ++ Sbjct: 959 SGVVSGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLTWRNFSYLRL 1018 Query: 91 --GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +N + + L + G GLNLQ + ++ F W+ + Sbjct: 1019 DGATKSEDRGELLRRFNSKDSEYFLFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ--- 1074 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1075 --DLQAQDRAHRIGQQNEVRVLRLLTVNSVEERILAAARYKLNMDEKVIQA 1123 >gi|322491113|emb|CBZ26378.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1284 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 68/157 (43%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DPC 99 K++ LE + + + +++ F L L++ G + Sbjct: 867 DCGKLQFLETALKKMRNDGHRMLIFTQFVHMLNILERFLALIGVVYTRLDGSTKAELRQQ 926 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + +I + S G GLNL G + ++F+ W+ ++ R + Sbjct: 927 YVDRFNADPRITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPT-----MDLQAQDRCHR 980 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V +Y LI+++T++E +L++ R + + ++++ Sbjct: 981 IGQTRPVTIYRLISEHTVEESILEKARERKKLNNVVI 1017 >gi|297707107|ref|XP_002830358.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Pongo abelii] Length = 2499 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEK-----HWKEVHD- 53 K Y + + L N + ++ + N + + +++ H Sbjct: 687 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 746 Query: 54 --------------EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 747 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 806 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 807 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 863 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 864 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 917 >gi|158255470|dbj|BAF83706.1| unnamed protein product [Homo sapiens] Length = 1162 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/238 (12%), Positives = 65/238 (27%), Gaps = 67/238 (28%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------------------- 52 + S+ ++ Q E+ Sbjct: 912 STVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSALTLSELRDSEPSST 971 Query: 53 ----------------------DEKIKALEVIIEKANAAPIIVAYHFNSDLA-------- 82 + LE I + + ++ + + L Sbjct: 972 VSLNGTFFKMELFEGMRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKK 1031 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 1032 HGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1090 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q +RI + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1091 NPSLEDQACDRI-----YRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1143 >gi|3702846|gb|AAC64044.1| RNA polymerase II termination factor [Homo sapiens] Length = 1162 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/238 (12%), Positives = 65/238 (27%), Gaps = 67/238 (28%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------------------- 52 + S+ ++ Q E+ Sbjct: 912 STVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSALTLSELRDSEPSST 971 Query: 53 ----------------------DEKIKALEVIIEKANAAPIIVAYHFNSDLA-------- 82 + LE I + + ++ + + L Sbjct: 972 VSLNGTFFKMELFEGMRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKK 1031 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 1032 HGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1090 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q +RI + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1091 NPSLEDQACDRI-----YRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1143 >gi|312221230|emb|CBY01171.1| hypothetical protein [Leptosphaeria maculans] Length = 1275 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++++ +++ + + +++ + Sbjct: 990 DSGKLAQLDALLKELKAGDHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD 1049 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1050 TVADFQSDRSIFVFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHR 1103 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + TI+E + +R K +Q ++++ Sbjct: 1104 LGQTRQVTVYRLITRGTIEERIRKRALQKEEVQRVVISG 1142 >gi|114658975|ref|XP_001170775.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 9 [Pan troglodytes] Length = 1834 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 732 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 791 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 792 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 851 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 852 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 905 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 906 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 949 >gi|73986636|ref|XP_853739.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 2 [Canis familiaris] Length = 1673 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|40807471|ref|NP_003585.3| transcription termination factor 2 [Homo sapiens] gi|73920148|sp|Q9UNY4|TTF2_HUMAN RecName: Full=Transcription termination factor 2; AltName: Full=Lodestar homolog; AltName: Full=RNA polymerase II termination factor; AltName: Full=Transcription release factor 2; Short=F2; Short=HuF2 gi|55665021|emb|CAH71961.1| transcription termination factor, RNA polymerase II [Homo sapiens] gi|55959604|emb|CAI12738.1| transcription termination factor, RNA polymerase II [Homo sapiens] gi|119577070|gb|EAW56666.1| transcription termination factor, RNA polymerase II, isoform CRA_a [Homo sapiens] gi|119577071|gb|EAW56667.1| transcription termination factor, RNA polymerase II, isoform CRA_a [Homo sapiens] Length = 1162 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/238 (12%), Positives = 65/238 (27%), Gaps = 67/238 (28%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------------------- 52 + S+ ++ Q E+ Sbjct: 912 STVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSALTLSELRDSEPSST 971 Query: 53 ----------------------DEKIKALEVIIEKANAAPIIVAYHFNSDLA-------- 82 + LE I + + ++ + + L Sbjct: 972 VSLNGTFFKMELFEGMRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKK 1031 Query: 83 --RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + ++ +N + ++ + G GLNL GGN L + W Sbjct: 1032 HGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1090 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q +RI + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1091 NPSLEDQACDRI-----YRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 1143 >gi|326668862|ref|XP_699360.4| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Danio rerio] Length = 2902 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 70/237 (29%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + + L N + ++ + N + Sbjct: 725 KYYRAILEKNFAFLAKGANQHNMPNLINTMMELRKCCNHPYLITGAEEKILESFRKTYSS 784 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A ++V L L+ Q R + Sbjct: 785 DAADFQLQAMIQAAGKLVLIDKLLPKLLAGGHKVLVFSQMVRCLDILEDYLIQRRYTYER 844 Query: 98 ----------PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I ++ + + + G G+NL + + F W+ + Sbjct: 845 IDGRVRGNLRQAAIDRFSKVDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 901 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 902 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 955 >gi|320169825|gb|EFW46724.1| DNA repair protein RAD54 [Capsaspora owczarzaki ATCC 30864] Length = 941 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 76/241 (31%), Gaps = 50/241 (20%) Query: 2 KQYHKF-----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE----------- 45 + Y ++L + A + +L N E Sbjct: 530 QLYEALIKSKAVKKLIASSASDGQTAAS-LGSITLLKKLCNHPDLIYEACQENFRELLPL 588 Query: 46 ------------KHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFP- 89 + + H K + L+ ++ + +++ ++ + + Sbjct: 589 FPPEYGVKNKRGRTFNPAHSGKFQVLDTMLAYVKSTTNDRVVLISNYTQTIDLFEDLARL 648 Query: 90 QGRTLDK---------DPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLW 138 +G + + E+N + + G G+NL GGN LV F Sbjct: 649 RGYRFVRLDGTLSVKARQKLVDEFNNPSSNVFLFLLSSKAGGCGINL-IGGNRLVLFDPD 707 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ + + R + G K+ V++Y + TI+E + QR K + +++ Sbjct: 708 WNPAS-----DGQAMARVWRDGQKKKVYLYRFLGTGTIEEKIFQRQAHKMALSSCVVDEE 762 Query: 199 K 199 + Sbjct: 763 E 763 >gi|302830624|ref|XP_002946878.1| hypothetical protein VOLCADRAFT_120343 [Volvox carteri f. nagariensis] gi|300267922|gb|EFJ52104.1| hypothetical protein VOLCADRAFT_120343 [Volvox carteri f. nagariensis] Length = 2539 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 67/209 (32%), Gaps = 27/209 (12%) Query: 2 KQYHKFQRELYCDLQGENIEA-----FNSASKTVKCLQLANGAVYYD---EEKHWKEVHD 53 + Y + +L ++ + + + + + N ++ E E Sbjct: 826 QYYKWILTRNFKELNKGSLGSHGGGHVSLLNIIGELKKCCNHPFLFESAEENYRGSEDDK 885 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--L 111 + + II + + ++ +N + P Sbjct: 886 SAMVRVLDII-----------SDYMRHRGFTHQRLDGSTPAAARHAAMEHFNRPESPDFA 934 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+NL + ++ F W+ + + ++R + G V +Y + Sbjct: 935 FLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAMSRAHRIGQTETVNIYRFV 988 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +++E +L+R + K + L + K+ Sbjct: 989 TSGSVEEDILERAKRKMVLDHLAGASAKQ 1017 >gi|312211534|emb|CBX91619.1| similar to chromatin remodelling complex ATPase chain ISW1 [Leptosphaeria maculans] Length = 1189 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 74/224 (33%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQRELYCDLQGE---NIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 ++ Y K + + G + ++ + N + Sbjct: 507 VQWYKKILEKDIDAVNGGAGTKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 566 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKD 97 + K+ L+ ++ KA + +++ + + Sbjct: 567 VTNAAKMVMLDKLLKRMKAKGSRVLIFSQMSRVLDIMEDYSVMRGYQYCRIDGSTAHEDR 626 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N+ L + G G+NL +++V F W+ + + + R Sbjct: 627 IQAIDDYNKEGSEKFLFLLTTRAGGLGINLTT-ADVVVLFDSDWNPQA-----DLQAMDR 680 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V+V+ + ++ I+E VL+R K + L++ + Sbjct: 681 AHRIGQTKQVYVFRFVTESAIEEKVLERAAQKLRLDQLVIQQGR 724 >gi|170036699|ref|XP_001846200.1| chromodomain helicase-DNA-binding protein 3 [Culex quinquefasciatus] gi|167879513|gb|EDS42896.1| chromodomain helicase-DNA-binding protein 3 [Culex quinquefasciatus] Length = 1982 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 66/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 K Y + L A + + + + N + + Sbjct: 1007 KYYKYILTRNFEALNPKGGGGACSLINIMMDLKKCCNHPYLFQAAVEEAPLGPGGNYEIT 1066 Query: 53 -----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA----------FPQGRTLD 95 K+ LE ++++ +++ L ++ G T Sbjct: 1067 ALTKAAGKLVLLEKMLKQLKETGHRVLIFSQMTKMLDIMEDFLEGIGYKYERIDGGITGT 1126 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1127 LRQEAIDRFNAPGAQQFCFLLSTKAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1180 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1181 SRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1222 >gi|195384048|ref|XP_002050736.1| GJ20044 [Drosophila virilis] gi|194145533|gb|EDW61929.1| GJ20044 [Drosophila virilis] Length = 3256 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 70/186 (37%), Gaps = 11/186 (5%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 L I A + + +Q G + + + K+ V+I + Sbjct: 1637 LTLLHPIISAMTTQFPDPRLIQYDCGKLQTLDR----LLRQLKVDGHRVLIFTQMTKMLD 1692 Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 V F + + +++ ++ +N + +I S G G+NL G + Sbjct: 1693 VLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADT 1751 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ ++ R + G R V +Y L+++ TI+ +L++ K + Sbjct: 1752 VIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTIEVNILKKANQKRMLS 1806 Query: 192 DLLLNA 197 D+ + Sbjct: 1807 DIAIEG 1812 >gi|310800555|gb|EFQ35448.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1107 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 19/182 (10%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ----- 90 N Y + + + KI+ + I+ + + IV F S + ++ F + Sbjct: 865 NDTNYNPDGQVSHILASAKIRQMMQILHKEVDQHKFIVFSQFTSMMDLVEPFFRKEGFKF 924 Query: 91 -----GRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 D+ ++ N+ +L GLNL ++ +W+ Sbjct: 925 TRYDGSMKNDEREASLHRLRNDKNTRILLCSLKCGSLGLNLTA-ATRVIILEPFWNP--- 980 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKETI 203 +E + R + V VY L + T++E +L K + + + +KK+ Sbjct: 981 --FVEEQAIDRVHRLTQTVDVIVYKLTVEKTVEERILALQEKKRLLAETAIEGGMKKDAF 1038 Query: 204 HV 205 + Sbjct: 1039 KL 1040 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 14/43 (32%), Gaps = 3/43 (6%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVY 41 + Y + + E + ++ N+ ++ Q N Sbjct: 571 RFYDRLETRADESIERMLKGKVDYANALVLLLRLRQACNHPKL 613 >gi|193712533|ref|XP_001943954.1| PREDICTED: putative DNA helicase Ino80-like isoform 1 [Acyrthosiphon pisum] Length = 1335 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 29/179 (16%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 S K Q ++ + + ++ + I+E+ + R + Sbjct: 1021 SLLTKLKQ-----------ENHRVLIYSQMTRMIDILEEYMWYKKL----------RYMR 1059 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1060 LDGSSKISERRDMVADFQNRSDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT---- 1114 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETI 203 +++ + R + G + V VY LI QN+I+E +LQR + KS IQ ++++ LK +T+ Sbjct: 1115 -VDQQAMDRAHRLGQTKQVTVYRLITQNSIEERILQRAKEKSEIQRMVISGGNLKPDTL 1172 >gi|331000570|ref|ZP_08324240.1| helicase protein [Parasutterella excrementihominis YIT 11859] gi|329571277|gb|EGG52970.1| helicase protein [Parasutterella excrementihominis YIT 11859] Length = 133 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 6/115 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ + G +PL + G GLNL + ++ WW+ Sbjct: 6 IEYLYLDGSVPAAQRKKLVETFQNGDMPLFLISLKAGGTGLNLTA-ADYVIHLDPWWNPA 64 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E R + G KR V +Y LI++ T+++ +L+ +TK + D LL Sbjct: 65 -----VEDQASDRAYRIGQKRPVTIYKLISEKTVEQKILELHKTKKNLADALLEG 114 >gi|73997434|ref|XP_867875.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 19 [Canis familiaris] Length = 1887 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/218 (11%), Positives = 61/218 (27%), Gaps = 30/218 (13%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 K Y + L + + + + N + E Sbjct: 963 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPEAPKMPNGMYDGSALIR 1022 Query: 52 --HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 + + K +++ L L+ G T + Sbjct: 1023 ASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQE 1082 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + +R Sbjct: 1083 AIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAFSRAH 1136 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V +Y + + +++E + Q + K + L++ Sbjct: 1137 RIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1174 >gi|20809475|gb|AAH29381.1| HELLS protein [Homo sapiens] Length = 348 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 64/191 (33%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 74 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 133 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 134 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 193 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + + + + R + G + V VY L+ NTID+ +++R Sbjct: 194 TA-ADTVIIYDSDCNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 247 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 248 AKRKLEKLIIH 258 >gi|330919879|ref|XP_003298794.1| hypothetical protein PTT_09611 [Pyrenophora teres f. teres 0-1] gi|311327831|gb|EFQ93101.1| hypothetical protein PTT_09611 [Pyrenophora teres f. teres 0-1] Length = 1239 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 18/161 (11%) Query: 52 HDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPC 99 KI+ L I+ ++ + +IV F S L ++ + R ++ Sbjct: 1008 PSTKIRQLLAILSQETPSHKVIVFSQFTSMLDLIEPFLRRASYTYTRYDGSMRNDHREAS 1067 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ +L GLNL + +V +W+ +E + R + Sbjct: 1068 LHKLRSDPHTRVLLCSLKCGSLGLNLTA-ASRVVIMEPFWNP-----FVEEQAIDRVHRL 1121 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V VY L +++++E +L+ K + + + K Sbjct: 1122 NQTVDVTVYRLSIRDSVEERILELQEAKRKLANAAIEGGKA 1162 Score = 38.2 bits (87), Expect = 0.62, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 12/43 (27%), Gaps = 4/43 (9%) Query: 4 YHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYY 42 Y + Q L GE + + ++ Q N Sbjct: 678 YTRLQDRTQARLDEMMGGEKQDYIGALVLLLRLRQACNHPDLV 720 >gi|226290256|gb|EEH45740.1| chromodomain helicase hrp3 [Paracoccidioides brasiliensis Pb18] Length = 1521 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 81/236 (34%), Gaps = 37/236 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--------------EE 45 ++ Y + Y L G + + + ++ + +N + E Sbjct: 707 LEYYKNILTKNYAALNQGSKGQKQSLLNIMMELKKASNHPFMFPNAESRILEGKTGREEM 766 Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 767 MRAIITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIA 826 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + G G+NL + +V F W+ + + Sbjct: 827 AGPRRLSIEHFNAPDSNDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 880 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIHV 205 + R + G + V VY L++++T++E VL+R R K ++ + + KE I + Sbjct: 881 AMARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDKEAIEL 936 >gi|114658977|ref|XP_001170676.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 4 [Pan troglodytes] gi|114658979|ref|XP_001170719.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 6 [Pan troglodytes] gi|114658981|ref|XP_001170756.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 8 [Pan troglodytes] Length = 1828 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|39968181|ref|XP_365481.1| hypothetical protein MGG_02183 [Magnaporthe oryzae 70-15] gi|145013063|gb|EDJ97704.1| hypothetical protein MGG_02183 [Magnaporthe oryzae 70-15] Length = 1912 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 68/183 (37%), Gaps = 35/183 (19%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA 87 + LQ G K++AL+ ++ K ++ L L++ Sbjct: 1576 KRLLQYDCG----------------KLQALDRLLRKLQAGGHRALIFTQMTKVLDILEQF 1619 Query: 88 FPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + +N + +I S G G+NL G + ++F+ Sbjct: 1620 LNIHGHKYLRLDGATKVEQRQILTDRFNHDPRILCFILSTRSGGLGINLT-GADTVIFYD 1678 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ +++ R + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1679 QDWNPA-----MDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1733 Query: 197 ALK 199 + Sbjct: 1734 EGE 1736 >gi|2645431|gb|AAB87382.1| CHD2 [Homo sapiens] Length = 1739 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|119470473|ref|XP_001258040.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] gi|119406192|gb|EAW16143.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] Length = 1148 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 62/169 (36%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 + + + KI+ L I+ +A IV F S L +++ + Sbjct: 898 LNPGDNETQVLPSTKIRHLMKILRREAGDYKFIVFSVFTSMLDKIEPFLKRAGIGFARYD 957 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 R ++ + + +L + GLNL + +V +W+ + Sbjct: 958 GSMRNDLREASLDRLRHNSATRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FV 1011 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E + R + V +Y +I ++T++E +L+ K + +L + Sbjct: 1012 EEQAIDRVHRLNQTVDVKIYKMIIKDTVEERILELQDRKRELANLTIEG 1060 Score = 40.1 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 15/46 (32%), Gaps = 4/46 (8%) Query: 1 MKQYHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYY 42 M Y + ++ L+ G ++ + ++ Q N Sbjct: 649 MNFYKRLEQRTENSLEKMMGGSKVDYAGALVLLLRLRQACNHPDLV 694 >gi|296825556|ref|XP_002850834.1| transcriptional accessory protein [Arthroderma otae CBS 113480] gi|238838388|gb|EEQ28050.1| transcriptional accessory protein [Arthroderma otae CBS 113480] Length = 1905 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 77/243 (31%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 K Q+++ + EA + +L N +E H + Sbjct: 1585 QKEQKDIANKVGSSEKEAKEHIFQALQYMRRLCNSPALVMKEGHKQYHQVQKLLASKNSH 1644 Query: 52 -----HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLARLQKA 87 H K+ AL ++ + ++ L +Q Sbjct: 1645 IRDIAHAPKLSALRDLLIDCGIGVDPSAEGELATGASYVSPHRALIFCQMKEMLDIVQND 1704 Query: 88 F-------------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 K + ++N + +L + G GLNL G + ++ Sbjct: 1705 VLRKLLPSVQFLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVI 1763 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1764 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVTST 1818 Query: 194 LLN 196 ++N Sbjct: 1819 VVN 1821 >gi|194874037|ref|XP_001973329.1| GG16034 [Drosophila erecta] gi|190655112|gb|EDV52355.1| GG16034 [Drosophila erecta] Length = 869 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 74/222 (33%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 K Y + + L+ + + + ++ + N + + Sbjct: 494 KFYKFILTKNFKALKQKGGGGVCSLLNIMMELRKCCNHPYLFPSAAEDASISPSGLYEIN 553 Query: 53 -----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K++ L ++++ A+ +++ L L+ + + Sbjct: 554 SLIKASGKLELLSKMLKQLKADNHRVLIFSQMTKMLNILENFLEEEGYQYERIDGLIKGD 613 Query: 98 --PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N K + + G G+NL + ++ F W+ + Sbjct: 614 LRQRAIDRFNAPKAEQFVFLLSTRAGGLGINL-ATADTVIIFDSDWNP-----HNDVQAF 667 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + N+++E ++Q + K + L++ Sbjct: 668 SRAHRMGQTKKVMIYRFVTHNSVEERMMQVAKHKMMLTHLVV 709 >gi|168052769|ref|XP_001778812.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162669818|gb|EDQ56398.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 2126 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 35/243 (14%), Positives = 78/243 (32%), Gaps = 48/243 (19%) Query: 3 QYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYD----EEKHWKEVH---- 52 Y ++ Y L N + + + N + E E+ Sbjct: 1095 LYGAILKKNYKQLNRGNTTGKKRSLNFILMDLKMVCNHPYLFPGKEPELGDPDELFRLLV 1154 Query: 53 --DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 K + LE ++ K +++ L L+ + Sbjct: 1155 TASGKFQLLEKLLPRLKEGGHRVLLFSQMTGMLDILEDFLTHLNFKFCRIDGSTLASERQ 1214 Query: 99 CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFF-----------------SLWW 139 I ++N I + + G G+NL L + + Sbjct: 1215 KQIADFNSTNSDIFIFLISTRAGGLGINLISLMLKLCWEGIRKFWLVLHFASLSATDPDF 1274 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++ R + G + V VY LI + +++E +++R R K +++L++++ + Sbjct: 1275 NP-----FVDLQAQARAHRIGQENVVLVYQLITKCSVEEKIIERSRQKLAMENLVMSSSE 1329 Query: 200 KET 202 K+T Sbjct: 1330 KDT 1332 >gi|119604572|gb|EAW84166.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_e [Homo sapiens] Length = 1275 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 668 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 727 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 728 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 787 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 788 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 843 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 844 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 892 >gi|42564102|ref|NP_187887.3| PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|30984019|gb|AAP40633.1| photoperiod independent early flowering1 [Arabidopsis thaliana] Length = 2055 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 66/167 (39%), Gaps = 11/167 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +Q G + + + K +I + V F + Sbjct: 1068 RLIQFDCGKLQ----ELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDG 1123 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ +Q +N KI L S G G+NL G + ++F+ W+ ++ Sbjct: 1124 STPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPA-----MD 1177 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G R V +Y LI+++TI+E +L++ K + +L++ Sbjct: 1178 QQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRVLDNLVIQ 1224 >gi|240274068|gb|EER37586.1| RSC complex subunit [Ajellomyces capsulatus H143] Length = 518 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 66/196 (33%), Gaps = 30/196 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDE----------KIKALEVIIEKAN--AAPIIVAY 75 ++ +L N ++ + K + L+ I+ K +++ + Sbjct: 1 MLMQLRKLCNHPFVFESVEDEMNPGRATNDLIWRTAGKFELLDRILPKFQASGHRVLMFF 60 Query: 76 HFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 + ++ D ++E+N + G GL Sbjct: 61 QMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKEFNAPGSDYFCFLLSTRAGGLGL 120 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ + W+ + + R + G K V + LI N+++E +L+ Sbjct: 121 NLQT-ADTVIIYDSDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITSNSVEERILEA 174 Query: 184 LRTKSTIQDLLLNALK 199 + K + ++ A K Sbjct: 175 AQFKLDMDGKVIQAGK 190 >gi|308808065|ref|XP_003081343.1| RA54B_CHICK DNA repair and recombination protein RAD54B (ISS) [Ostreococcus tauri] gi|116059805|emb|CAL55512.1| RA54B_CHICK DNA repair and recombination protein RAD54B (ISS) [Ostreococcus tauri] Length = 792 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 68/208 (32%), Gaps = 23/208 (11%) Query: 3 QY-HKFQ-RELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIK 57 Y + + + + L G+ +A + S +L N A E + K+ Sbjct: 483 LYVEQLKAKSMQAMLGRIGKTDDAISPLSAIQTLQKLCNAAALASEAHRDDPIETSSKLC 542 Query: 58 ALEVIIEKAN-AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNE 106 L + I++ F + L ++++N Sbjct: 543 VLRSMFRALPSDERIVIVSGFTTTLDLIALLCEGEKLKYDRLQGSTPPKDRTAIVRKFNT 602 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL G N LV W+ + R + G + Sbjct: 603 TG-RILLLSTKAGGVGLNL-VGANRLVLVDSSWNPAH-----DLQAQARIWREGQTKKCT 655 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +Y L++ TI+E + QR K ++ L Sbjct: 656 IYRLLSTGTIEERMFQRQELKGSLARTL 683 >gi|255082185|ref|XP_002508311.1| SNF2 super family [Micromonas sp. RCC299] gi|226523587|gb|ACO69569.1| SNF2 super family [Micromonas sp. RCC299] Length = 1126 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 76/249 (30%), Gaps = 64/249 (25%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE----------------- 45 Y F E A + +L N + Sbjct: 447 IYRHFLSEKAAKTIATGKSAM-VLAAITGLKKLCNHPKLIHDMISAAKTTNKGAAGFESC 505 Query: 46 -------------------------KHWKEVHDEK---IKALEVIIEKANAAPIIVAYHF 77 E+H K + L I+ K +++ ++ Sbjct: 506 ADFFGDGLYDSGARGHGRERGGGGLPEGWELHSGKFAVLARLLAILRKETKDRVVIISNY 565 Query: 78 NSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNL 125 L +Q ++ K ++ +N+ + + G G+NL Sbjct: 566 TQTLDLIQTLCRNNRYPFCRLDGSTSISKRQKLVKRFNDPAEDCFVFLLSSKAGGCGINL 625 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 GGN LV F W+ ++ R + G K+ ++Y +A +I+E V QR Sbjct: 626 -IGGNRLVLFDPDWNPAN-----DKQAAARCWRDGQKKKCYLYRFLATGSIEEKVFQRQL 679 Query: 186 TKSTIQDLL 194 +K ++Q+++ Sbjct: 680 SKESLQNVV 688 >gi|156375431|ref|XP_001630084.1| predicted protein [Nematostella vectensis] gi|156217098|gb|EDO38021.1| predicted protein [Nematostella vectensis] Length = 1872 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 76/232 (32%), Gaps = 56/232 (24%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----------------HDEKI 56 ++ + A + ++ N + +H + H K+ Sbjct: 1576 EMASKKGSA-HIFQALQYLRKVCNHPLLVLTPQHPEHDKIMQQLKETRQSLKDIHHAAKL 1634 Query: 57 KALEVIIEKA------------------NAAPIIVAYHFNSDLARLQKAFPQ-------- 90 AL+ ++ + +++ S L ++ + Sbjct: 1635 VALKQLLLDCGIGVSTSSTSDLASEPVVSQHRVLLFCQLKSMLDIVENDLFKTNMPSVTY 1694 Query: 91 -----GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + +N + I +L G GLNL G + ++F W+ Sbjct: 1695 LRLDGSTPAGSRHSIVHRFNNDPSIDVLLLTTHVGGLGLNLT-GADTVIFVEHDWNP--- 1750 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 M + + R + G K+ V VY L+ + T++E ++ + K TI + +++ Sbjct: 1751 --MKDLQAMDRAHRIGQKKVVNVYRLVTKGTLEEKIMGLQKFKMTIANTVIS 1800 >gi|255079182|ref|XP_002503171.1| SNF2 super family [Micromonas sp. RCC299] gi|226518437|gb|ACO64429.1| SNF2 super family [Micromonas sp. RCC299] Length = 1026 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 73/223 (32%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDEEK--------HWKE 50 + Q+E Y ++I+ NS + ++ + N + + Sbjct: 405 EMQKEYYKRALQKDIQVVNSGGDRSRLLNMVMQLRKCCNHPYLFQGAEPGPPFFTDEHLV 464 Query: 51 VHDEKI--KALEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDK-DP 98 + K+ + K + +++ L R + G T Sbjct: 465 ENSGKMVLLDKLLKKLKEKGSRVLIFSQMTRLLDILEDYLLFRRYKYCRIDGNTDGDTRE 524 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + + G G+NL + +V + W+ + ++ + R Sbjct: 525 DMIDSYNAPGSEKFVFLLSTRAGGLGINLTT-ADTVVIYDSDWNPQ-----MDLQAMDRA 578 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V V+ +++E V+++ K + L++ + Sbjct: 579 HRIGQTKEVSVFRFCTDGSVEEKVIEKAYKKLALDALVIQQGR 621 >gi|195496103|ref|XP_002095551.1| GE22457 [Drosophila yakuba] gi|194181652|gb|EDW95263.1| GE22457 [Drosophila yakuba] Length = 1982 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEE--------KHW 48 Q++ Y + +N EA NS + + + N + Sbjct: 982 AMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTSAGGL 1041 Query: 49 KEVHD-----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 E++ K+ L ++++ + +++ L L+ + + Sbjct: 1042 YEINSLTKAAGKLVLLSKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGG 1101 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + + G G+NL + ++ + W+ + Sbjct: 1102 ITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1155 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1156 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1201 >gi|119622565|gb|EAX02160.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo sapiens] gi|119622567|gb|EAX02162.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo sapiens] gi|119622569|gb|EAX02164.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo sapiens] gi|239740390|gb|ACS13730.1| chromodomain-helicase-dna-binding protein 2 [Homo sapiens] Length = 1739 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|119604569|gb|EAW84163.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_b [Homo sapiens] Length = 1274 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 668 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 727 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 728 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 787 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 788 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 843 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 844 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 892 >gi|121699521|ref|XP_001268048.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] gi|119396190|gb|EAW06622.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] Length = 1147 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 ++ + + KI+ L I+ +A+ IV F S L +++ + Sbjct: 896 LNPGDEDDQVLPSTKIRHLMKILRGEADEHKFIVFSVFTSMLDKIEPFLKRAGIGFARYD 955 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 R ++ + N +L + GLNL + +V +W+ + Sbjct: 956 GSMRNDHREASLNKLRNNSATRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FV 1009 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E + R + V +Y +I + T++E +L+ K + +L + Sbjct: 1010 EEQAIDRVHRLNQTVDVKIYKMIIKETVEERILELQDRKRELANLTIEG 1058 Score = 39.0 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 15/46 (32%), Gaps = 4/46 (8%) Query: 1 MKQYHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYY 42 M Y + ++ L+ G ++ + ++ Q N Sbjct: 647 MNFYKRLEQRTENSLEKMMGGSKMDYAGALVLLLRLRQSCNHPDLV 692 >gi|242017030|ref|XP_002428996.1| lymphoid specific helicase, putative [Pediculus humanus corporis] gi|212513842|gb|EEB16258.1| lymphoid specific helicase, putative [Pediculus humanus corporis] Length = 806 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%) Query: 30 VKCLQLANGAVYYDEE----------KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHF 77 + ++ N K+ L+ ++ K +I+ F Sbjct: 526 MNLRKVVNHPFLIQYPLKEGTEELRIDEDLVKESGKMLVLDALLSKLKSRGHKVIIFSFF 585 Query: 78 NSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 L L+ + + +I + S G G+NL Sbjct: 586 KVVLDILEDYVLLRDYQYSRLDGDLNIPKRNEEIQKFMDNPEIFVFLITMRSGGLGINLT 645 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + ++F+ W+ + Q +R + G + V +Y L + TIDE +++R Sbjct: 646 A-ADTVIFYDSDWNPTINLQSQDRC-----HRIGQSKPVMIYRLCVKGTIDEKIIERANA 699 Query: 187 KSTIQDLLLNALK 199 K ++ ++L K Sbjct: 700 KRRLEKMILQKGK 712 >gi|170581274|ref|XP_001895612.1| SNF2 family N-terminal domain containing protein [Brugia malayi] gi|158597372|gb|EDP35538.1| SNF2 family N-terminal domain containing protein [Brugia malayi] Length = 1965 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 67/169 (39%), Gaps = 11/169 (6%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 ++ ++ G + +HD + +I A + + F S Sbjct: 1327 LRLIEYDCGKLQVL----NSLLHDLFLYKHRCLIFTQMARVLDILQAFLSFHGYQYFRLD 1382 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +++ + +N + KI S G G+NL G + ++F+ W+ + Sbjct: 1383 GTTGIEQRQAMTERFNADPKIFCFILSTRSGGIGVNLT-GADTVIFYDSDWNPT-----M 1436 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G R V +Y L+++ TI+E +L++ K + ++ ++ Sbjct: 1437 DAQAQDRCHRIGQTRNVTIYRLVSERTIEENILRKAMQKRRLGEMAIDE 1485 >gi|118421089|ref|NP_001262.3| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Homo sapiens] gi|119370320|sp|O14647|CHD2_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 2; Short=CHD-2; AltName: Full=ATP-dependent helicase CHD2 gi|225000176|gb|AAI72425.1| Chromodomain helicase DNA binding protein 2 [synthetic construct] Length = 1828 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|31745178|ref|NP_853634.1| transcription activator BRG1 [Danio rerio] gi|30385206|gb|AAP22968.1| brahma protein-like protein 1 [Danio rerio] gi|30385209|gb|AAP22969.1| brahma protein-like protein 1 [Danio rerio] gi|190340088|gb|AAI63918.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Danio rerio] gi|190340090|gb|AAI63920.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Danio rerio] Length = 1627 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 71/231 (30%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1019 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1078 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 K + L+ I+ K A +++ + + ++ F Sbjct: 1079 GGIVQGSDLYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRL 1138 Query: 96 -------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +N+ + + G GLNLQ + ++ F W+ + Sbjct: 1139 DGTTKAEDRGMLLKNFNDPSHQYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1194 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1195 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1243 >gi|26378644|dbj|BAB28757.2| unnamed protein product [Mus musculus] Length = 808 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + ++V Sbjct: 534 MMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLVFSQ 593 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + I +N + + L + G G+NL Sbjct: 594 MTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINL 653 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 654 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 707 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 708 AKRKLEKLIIH 718 >gi|73951149|ref|XP_859392.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 13 [Canis familiaris] Length = 1814 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 711 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLS 770 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 771 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 830 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 831 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 884 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 885 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 928 >gi|73951153|ref|XP_859466.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 15 [Canis familiaris] Length = 1812 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 711 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLS 770 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 771 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 830 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 831 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 884 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 885 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 928 >gi|11994423|dbj|BAB02425.1| helicase-like protein [Arabidopsis thaliana] Length = 2061 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 66/167 (39%), Gaps = 11/167 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +Q G + + + K +I + V F + Sbjct: 1074 RLIQFDCGKLQ----ELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDG 1129 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ +Q +N KI L S G G+NL G + ++F+ W+ ++ Sbjct: 1130 STPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPA-----MD 1183 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G R V +Y LI+++TI+E +L++ K + +L++ Sbjct: 1184 QQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRVLDNLVIQ 1230 >gi|114658985|ref|XP_510607.2| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 10 [Pan troglodytes] Length = 1739 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|213625823|gb|AAI71410.1| Helicase, lymphoid-specific [Danio rerio] gi|213627472|gb|AAI71408.1| Helicase, lymphoid-specific [Danio rerio] gi|220677979|emb|CAX14759.1| helicase, lymphoid-specific [Danio rerio] Length = 853 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 29/194 (14%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVIIEKAN--AAPIIVAYH 76 + + N A + K L+ ++ + +++ Sbjct: 580 LMLLKRCCNHAYLIEYPLDPTTGDFKIDEQLVEASGKFLILDRMLPELKKRGHKVLIFSQ 639 Query: 77 FNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 S L L D+D + ++ ++ L + G G+NL Sbjct: 640 MTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLSTRAGGLGINL 699 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ F W+ + + R + G + V VY LI NTIDE +L+R Sbjct: 700 TS-ADTVIIFDSDWNPQA-----DLQAQDRCHRIGQTKPVVVYRLITANTIDEKILERAS 753 Query: 186 TKSTIQDLLLNALK 199 K ++ ++++ K Sbjct: 754 AKRKLEKMVIHKNK 767 >gi|115939069|ref|XP_001193731.1| PREDICTED: similar to chromodomain helicase DNA binding protein 5, partial [Strongylocentrotus purpuratus] Length = 2038 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/223 (11%), Positives = 67/223 (30%), Gaps = 35/223 (15%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYD---------EEKHWKE 50 K Y + L + + + + + + N + + ++ Sbjct: 955 KYYKYILTRNFQALNTKAAGGGSVSLLNIMMDLKKCCNHPYLFPTAAADAQRLQNGAFEV 1014 Query: 51 VHDEKIKALEVIIEKA------NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 V K V++ K + +++ L L+ + Sbjct: 1015 VSLIKSCGKLVLLCKMLRMLKKDNHRVLIFSQMTRMLDLLEDFLEGEGYKYERIDGGVTG 1074 Query: 98 ---PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I +N + + G G+NL + ++ + W+ + Sbjct: 1075 GLRQEAIDRFNAPGAEQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQA 1128 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1129 FSRAHRIGQSNKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1171 >gi|330931645|ref|XP_003303483.1| hypothetical protein PTT_15707 [Pyrenophora teres f. teres 0-1] gi|311320499|gb|EFQ88422.1| hypothetical protein PTT_15707 [Pyrenophora teres f. teres 0-1] Length = 1731 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 73/209 (34%), Gaps = 31/209 (14%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----------HDEKIKALEVIIEKA 66 + E N ++ ++ + Y E + K+ LE+++ K Sbjct: 996 KQQERANLSNILMQLRKCLCHPFVYSREIEERSDVAAVSHRNLVEASAKLSLLEMLLPKL 1055 Query: 67 N--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL-- 112 + +++ F L ++ + + I ++N PL Sbjct: 1056 HERGHRVLIFSQFLDMLNIIEDFLDGMQLSYQRLDGSMGSLEKQKRIDQFNAPDSPLFAF 1115 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ W+ + + + R + G K+ V L Sbjct: 1116 LLSTRAGGVGINL-ATADTVIILDPDWNPHQ-----DLQAIARAHRIGQKKKVLCLQLAT 1169 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +++E ++Q + K + +++ L +E Sbjct: 1170 RASVEEKIMQMGKKKMALDKVVVQDLDRE 1198 >gi|238487360|ref|XP_002374918.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus NRRL3357] gi|220699797|gb|EED56136.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus NRRL3357] Length = 682 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 384 LKAIGLLKKLCNHPDLLNLSTDLPGCEFAFPEDYVPPEARGRDRDIKSWYSGKMMVLDRM 443 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K ++K + ++N Sbjct: 444 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDG 503 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 504 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 557 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 558 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 589 >gi|326435102|gb|EGD80672.1| acyl-CoA dehydrogenase domain-containing protein [Salpingoeca sp. ATCC 50818] Length = 832 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 69/184 (37%), Gaps = 27/184 (14%) Query: 32 CLQLAN-----GAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARL 84 L DE+ + K L+ ++ K +++ F + L L Sbjct: 638 LHNLCCTSPPLHPFKLDEDDMMQ---SGKFAVLKDLLHKRSEQGDRVLLFSQFTTMLNIL 694 Query: 85 QKA----------FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ +++ I ++ N+ I + G G+NL N+++ Sbjct: 695 ERFLTSLGISFLRIDGSTPVEERQDLIDKFTNDKSIFCFLLSTKAGGLGINLTA-ANVVI 753 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + ++ ++ R + G + V V LI++++++E++L+R K ++ Sbjct: 754 LHDIDFNP-----YNDKQAEDRCHRVGQTKPVHVIRLISKDSVEEVMLKRADLKLQLEKD 808 Query: 194 LLNA 197 + + Sbjct: 809 MTQS 812 >gi|312214448|emb|CBX94440.1| hypothetical protein [Leptosphaeria maculans] Length = 1719 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 74/212 (34%), Gaps = 31/212 (14%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVH----------DEKIKALEVIIEKA 66 + E N ++ ++ + Y E + ++ K+ LE+++ K Sbjct: 997 KQQERANLSNILMQLRKCLCHPFVYSREIEERTDIAAVSHRNLVEASAKLSLLEILLPKL 1056 Query: 67 N--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL-- 112 +++ F L ++ + + I ++N PL Sbjct: 1057 QERGHRVLIFSQFLDMLNIIEDFLDGMQLSYQRLDGTMGSLEKQKRIDQFNAPDSPLFAF 1116 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ W+ + + + R + G K+ V L Sbjct: 1117 LLSTRAGGVGINL-ATADTVIILDPDWNPHQ-----DLQAIARAHRIGQKKKVLCLQLTT 1170 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + +++E ++Q R K + +++ L + I Sbjct: 1171 RASVEEKIMQMGRKKMALDHVVVEQLDTDDIE 1202 >gi|315040818|ref|XP_003169786.1| ATP-dependent helicase RIS1 [Arthroderma gypseum CBS 118893] gi|311345748|gb|EFR04951.1| ATP-dependent helicase RIS1 [Arthroderma gypseum CBS 118893] Length = 1050 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%) Query: 53 DEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCT 100 KI+ L I+++ + IV F S L +++ G ++ Sbjct: 809 SAKIRHLMRILKRESGQSKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASL 868 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N +L + GLNL + +V +W+ +E + R + Sbjct: 869 NRLRNSSSTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEEQAIDRVHRLN 922 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++E +L+ K + + Sbjct: 923 QTVDVKVYKLTIKGTVEERILELQERKRELAKSTIEG 959 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + R L + G+NI + ++ Q N Sbjct: 561 YQRLEQRADRSLERMIGGQNISYAGALVLLLRLRQACNHPDLV 603 >gi|505088|dbj|BAA05143.1| transcriptional activator hSNF2b [Homo sapiens] gi|902046|gb|AAB40977.1| transcriptional activator [Homo sapiens] Length = 1647 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|159130376|gb|EDP55489.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus A1163] Length = 681 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 66/212 (31%), Gaps = 44/212 (20%) Query: 26 ASKTVKCLQLANGAVY--------------------------YDEEKHWKEVHDEKIKAL 59 +L N + K W + + Sbjct: 383 LKAIGILKKLCNHPDLLDLTRDLPGCEHTFPEDYVPPEARGRDRDIKSWYSGKMMVLDRM 442 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 I + I++ ++ L +K ++K + ++N Sbjct: 443 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNINKRQKLVDKFNNPDG 502 Query: 110 --PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLNL G N LV F W+ Q + R + G K+ FV Sbjct: 503 EEFVFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAADQ-----QALARVWRDGQKKDCFV 556 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y IA +I+E + QR K ++ ++++ + Sbjct: 557 YRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE 588 >gi|123454531|ref|XP_001315018.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gi|121897682|gb|EAY02795.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] Length = 1656 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 71/232 (30%), Gaps = 41/232 (17%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------- 52 Y + L G N + + ++ + Sbjct: 454 YRAILEQNSSFLSGGT----NLLNIAMDLRKVCIHPFLIKGAEDKILADMGYTNQPDKAL 509 Query: 53 ------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA-FPQGRTLDK------- 96 K+ ++ ++ KA+ +++ + L LQ G + Sbjct: 510 EAIIRSSGKMILIDKLLPKLKADGHRVLIFSQMTNLLDILQDYLAATGYKFLRLDGQVKP 569 Query: 97 --DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I +N + + G G+NL + ++ F W+ + + Sbjct: 570 SVRQSLIDHFNAPDSDDFIFLLSTRAGGLGINL-NAADTVIIFDSDWNPQN-----DLQA 623 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G ++ V VY LI + T ++ + + K + +L+ KK+ + Sbjct: 624 QARCHRIGQQKTVKVYRLITKGTYEQNMFEISSKKLGLGHAILDKTKKKELD 675 >gi|115727574|ref|XP_001176374.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 1 [Strongylocentrotus purpuratus] gi|115939382|ref|XP_001175986.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 1 [Strongylocentrotus purpuratus] Length = 1031 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 82/244 (33%), Gaps = 52/244 (21%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNSASK---------TVKCLQLANGAVYY------- 42 K Y QRE Y + ++I+ N A K + + N + Sbjct: 368 KMYVGMSIMQREWYTKILMKDIDVVNGAGKSDKMRLMNILMHLRKCGNHPYLFDGAEPGP 427 Query: 43 -DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-- 97 + K+ L+ ++ K + +++ L L+ Sbjct: 428 PYTTDKHLVENSGKMSVLDKLLPKLKEQGSRVLIFSQMTRLLDILEDYCVWRGHNYCRLD 487 Query: 98 --------------------PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFF 135 +I +N + + G G+NL +I+V + Sbjct: 488 GQTPHAERQVSRLPMPCSHSQESINNFNMPDSEKFVFLLSTRAGGLGINL-ATADIVVLY 546 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + ++ + R + G K+ V V+ I++NT++E +++R K + ++++ Sbjct: 547 DSDWNPQ-----VDLQAMDRAHRIGQKKQVHVFRFISENTVEERIVERAEMKLRLDNIVI 601 Query: 196 NALK 199 + Sbjct: 602 QQGR 605 >gi|224004374|ref|XP_002295838.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209585870|gb|ACI64555.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 153 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 7/119 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + ++ ++ +N + I +L G GLNL G + ++F Sbjct: 23 HMPSLEYLRLDGKVPSNRRSAIVERFNHDDNIKVLLLTTKVGGLGLNLT-GADKVIFLEP 81 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ ++ + R + G + V VY LI +TI+E +++ + K T D ++N Sbjct: 82 DWNP-----FVDLQAMDRAHRIGQTKTVNVYRLITTDTIEEKIMKLQQRKQTTSDAVVN 135 >gi|238624120|ref|NP_001121770.2| chromodomain helicase DNA binding protein 1 [Danio rerio] Length = 1693 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 74/224 (33%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + Sbjct: 710 KQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNRQEGLQH 769 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + L + Sbjct: 770 LVRSSGKLILLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLKYRQFLFQRLDGSIKGEM 829 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 830 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 883 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +++R + K + L++ + Sbjct: 884 RAHRIGQKKQVNIYRLVTKGSVEEEIIERAKKKMVLDHLVIQRM 927 >gi|299753600|ref|XP_002911886.1| Mot1 [Coprinopsis cinerea okayama7#130] gi|298410374|gb|EFI28392.1| Mot1 [Coprinopsis cinerea okayama7#130] Length = 1929 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 34/240 (14%), Positives = 71/240 (29%), Gaps = 64/240 (26%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----------------HDEKIKA 58 ++ + + +L N ++ +V + K+ A Sbjct: 1624 VEKGDPAQQHVFQSLQYLRKLCNHPALVLRDEEATKVALENAKLTKDSLRDIQNAPKLLA 1683 Query: 59 LEVIIEKA----------------------------NAAPIIVAYHFNSDLAR------- 83 L+ ++ + +++ L Sbjct: 1684 LKQLLMDCGIGSPPALAADSQKSELIDAPTDTSGTFSQHRVLIFCQMKQMLDIIETDLFK 1743 Query: 84 ------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 +K +Q +N + I L G GL L G + ++F Sbjct: 1744 PHMPSVTYMRLDGSTDANKRHAIVQTFNSDPSIDCLLLTTHVGGLGLTLT-GADTVIFVE 1802 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY LI + T++E ++ R K I + ++N Sbjct: 1803 HDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITKGTLEEKIMGLQRFKLNIANSIVN 1857 >gi|296232911|ref|XP_002761790.1| PREDICTED: transcription activator BRG1 [Callithrix jacchus] Length = 1679 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|149020472|gb|EDL78277.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_a [Rattus norvegicus] Length = 1647 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|73951143|ref|XP_859285.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 10 [Canis familiaris] Length = 1806 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 711 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLS 770 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 771 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 830 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 831 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 884 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 885 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 928 >gi|119570423|gb|EAW50038.1| helicase, lymphoid-specific, isoform CRA_m [Homo sapiens] Length = 874 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 65/192 (33%), Gaps = 30/192 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEK---ANAAPIIVAY 75 + + N + + K L+ ++ + +++ Sbjct: 564 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVVLLFS 623 Query: 76 HFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 S L L + + + +N + ++ + + G G+N Sbjct: 624 QMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGIN 683 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 684 LTA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERA 737 Query: 185 RTKSTIQDLLLN 196 K ++ L+++ Sbjct: 738 AAKRKLEKLIIH 749 >gi|114658991|ref|XP_001170635.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 2 [Pan troglodytes] gi|114658993|ref|XP_001170689.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 5 [Pan troglodytes] Length = 1730 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 628 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 687 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 688 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 747 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 748 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 801 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 802 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 845 >gi|192807323|ref|NP_001122321.1| transcription activator BRG1 isoform A [Homo sapiens] gi|10946129|gb|AAG24790.1|AF254822_2 SMARCA4 isoform 2 [Homo sapiens] gi|119604570|gb|EAW84164.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_c [Homo sapiens] Length = 1679 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|296814674|ref|XP_002847674.1| RING-13 protein [Arthroderma otae CBS 113480] gi|238840699|gb|EEQ30361.1| RING-13 protein [Arthroderma otae CBS 113480] Length = 1176 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 63/201 (31%), Gaps = 33/201 (16%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII---EKAN 67 +L+ E N +K L + K+ I+ + Sbjct: 968 SLAELKKE--AQRNVKAKRKYLRTL-----------DKRWEPSAKVDKTIEILESLHNSG 1014 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHP 116 I+ F S L ++ + + + + ++ Sbjct: 1015 DEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGSMKPADRNDSVLDFTDNPDCRIMLVSL 1074 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLNL + ++ +W+ IE + R + G R V V+ L+ +NT+ Sbjct: 1075 KAGNAGLNLVA-ASQVIILDPFWNP-----YIEDQAIDRAHRIGQMRPVMVHRLLVENTV 1128 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 ++ ++ K + + L+ Sbjct: 1129 EDRIIALQDKKRELIEGALDE 1149 >gi|225682812|gb|EEH21096.1| chromodomain helicase hrp1 [Paracoccidioides brasiliensis Pb03] Length = 1521 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 81/236 (34%), Gaps = 37/236 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--------------EE 45 ++ Y + Y L G + + + ++ + +N + E Sbjct: 707 LEYYKNILTKNYAALNQGSKGQKQSLLNIMMELKKASNHPFMFPNAESRILEGKTGREEM 766 Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 767 MRAIITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIA 826 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + G G+NL + +V F W+ + + Sbjct: 827 AGPRRLSIEHFNAPDSNDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 880 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIHV 205 + R + G + V VY L++++T++E VL+R R K ++ + + KE I + Sbjct: 881 AMARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLLEFITIQRGVTDKEAIEL 936 >gi|327281454|ref|XP_003225463.1| PREDICTED: lymphoid-specific helicase-like [Anolis carolinensis] Length = 811 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 23/191 (12%), Positives = 62/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYD---EEKHWKEV-------HDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + E + K L+ ++ + +++ Sbjct: 538 MMLLRKCCNHPYLIEYPLEPGTQQFKVDEDLVNSSGKFLLLDRMLPELKKRGHKVLLFSQ 597 Query: 77 FNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 L L ++D + + ++ + + G G+NL Sbjct: 598 MTQMLDILMDYCYLRNYQFSRLDGSMSYTERDENMSKFNKDQEVFIFLLSTRAGGLGINL 657 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY + NTID+ +++ Sbjct: 658 TA-ADTVIIYDSDWNPQ-----CDLQAQDRCHRIGQTKPVVVYRFVTANTIDQKIVETAA 711 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 712 AKRKLEKLVIH 722 >gi|327263457|ref|XP_003216536.1| PREDICTED: probable global transcription activator SNF2L2-like [Anolis carolinensis] Length = 1559 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 965 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 1024 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1025 NGVITGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFAYLRL 1084 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1085 DGTTKSEDRAALLKKFNEPNSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1140 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1141 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILSAAKYKLNVDQKVIQA 1189 >gi|301771978|ref|XP_002921403.1| PREDICTED: transcription activator BRG1-like isoform 1 [Ailuropoda melanoleuca] Length = 1639 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|297703588|ref|XP_002828719.1| PREDICTED: transcription activator BRG1-like isoform 1 [Pongo abelii] Length = 1679 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|303279422|ref|XP_003059004.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226460164|gb|EEH57459.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 1131 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 65/249 (26%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK---------- 49 + Y F + L G++ + +L N + + + Sbjct: 445 QLYQHFLDSKAAKAALTGKSTM---VLAAITALKKLCNHPKLIYDMINAEKNTGSAAAGF 501 Query: 50 -----------------------------EVHDEK---IKALEVIIEKANAAPIIVAYHF 77 E H K + L I+ I++ ++ Sbjct: 502 ESCGAYFQPGMYDVRGPHGRGKSGMCDGWEFHSGKFAVLARLLAILRAETKDRIVIISNY 561 Query: 78 NSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNL 125 L G ++ K ++++N+ + + G G+NL Sbjct: 562 TQTLDLVQFLCKQNNYPHCRLDGGTSITKRQKLVRQFNDPTENCFVFLLSSKAGGCGINL 621 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 GGN LV F W+ ++ R + G K+ ++Y L A +I+E V QR Sbjct: 622 -IGGNRLVLFDPDWNPAN-----DKQAAARCWRDGQKKKCYLYRLFATGSIEEKVFQRQL 675 Query: 186 TKSTIQDLL 194 +K ++Q+++ Sbjct: 676 SKESLQNVV 684 >gi|225850307|ref|YP_002730541.1| helicase, Snf2 family [Persephonella marina EX-H1] gi|225646235|gb|ACO04421.1| helicase, Snf2 family [Persephonella marina EX-H1] Length = 562 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 76/212 (35%), Gaps = 30/212 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + + I N K Q+ N K K+ L II Sbjct: 341 EDIIDKYRDEKNFKFILKQNIIHSIQKLRQVCNFPS--------KGFDSPKMARLREIII 392 Query: 65 K--ANAAPIIVAYHFN-------------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + N +IV +F + G ++ ++++ E K Sbjct: 393 ELIKNDEKVIVFTNFVKYGIERIVNNLSYYINPDYIVQYHGGMRPEEKIKAVKDFKEKKN 452 Query: 110 P-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + S G GL L + +FF L W+ + Q +RI + G K + +Y Sbjct: 453 KYVFIGTITSAGEGLTLTE-SSYAIFFDLHWNPAKIWQAEDRI-----HRIGQKNKINIY 506 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + +NT++E +LQ+L K + +++ ++K Sbjct: 507 NFVMRNTVEERILQKLEEKRAMIQNVIDGIEK 538 >gi|84997840|ref|XP_953641.1| DEAD-box family helicase [Theileria annulata] gi|65304638|emb|CAI72963.1| DEAD-box family helicase, putative [Theileria annulata] Length = 1724 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 17/161 (10%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKA-FPQGRTLDK---------DPCTIQEW 104 K+ ++ K+ I+ F+ L L+ G T + I + Sbjct: 1409 KVLGPLLLKLKSEDHRCIIYTQFSKMLDILENWINFMGFTYIRLDGSTKIDMRQKIINRF 1468 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N KI L + + G G+ L G + ++F+ W+ I+R + R + G + Sbjct: 1469 NENTKIFLFISSTRTGGVGITLT-GADTVIFYDTDWNPA-----IDRQAMDRCHRIGQTK 1522 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V VY LI ++T++E + ++ K + DL+++ + + H Sbjct: 1523 DVNVYRLITEHTVEENIWRKQLQKRKLDDLIVDQGQFDVQH 1563 >gi|297814462|ref|XP_002875114.1| CHR19/ETL1 [Arabidopsis lyrata subsp. lyrata] gi|297320952|gb|EFH51373.1| CHR19/ETL1 [Arabidopsis lyrata subsp. lyrata] Length = 764 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K + L ++ K + +++ + S L L+ + Sbjct: 588 SAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTI 647 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N K I + G GLNL G + ++ + ++ + I+R R + Sbjct: 648 VDTFNNDKSIFACLLSTRAGGQGLNLT-GADTVIIHDMDFNPQ-----IDRQAEDRCHRI 701 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V ++ L+ ++T+DE + + + K + +L + Sbjct: 702 GQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLES 739 >gi|291233872|ref|XP_002736874.1| PREDICTED: DNA repair and recombination protein RAD54-like [Saccoglossus kowalevskii] Length = 678 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 74/211 (35%), Gaps = 42/211 (19%) Query: 22 AFNSASKTVKCLQLANGAVYYDEE---------------------KHWKEVHDEKIKALE 60 + +S S + +L N + K + K++ L+ Sbjct: 378 SMSSLSSITQLKKLCNHPSLIYNKCVDGEEGFDGALDLFPSNFNAKGVQPELSGKMQVLD 437 Query: 61 VII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 I+ ++ +++ ++ L +K ++ K ++ +N Sbjct: 438 YILAVTRTTSSDKVVLVSNYTQTLDLFEKLCHNRGYLYVRLDGSMSIKKRAKMVERFNNP 497 Query: 108 KI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G N LV F W+ + + R + G K+ Sbjct: 498 SSAEYIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN-----DDQAMARVWRDGQKKQC 551 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y L++ TI+E + QR K + +++ Sbjct: 552 YIYRLLSTGTIEEKIFQRQAHKKALSSCVVD 582 >gi|242059437|ref|XP_002458864.1| hypothetical protein SORBIDRAFT_03g041720 [Sorghum bicolor] gi|241930839|gb|EES03984.1| hypothetical protein SORBIDRAFT_03g041720 [Sorghum bicolor] Length = 1207 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 86/227 (37%), Gaps = 33/227 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEVHDEKI-- 56 + Y + Y L G I++ + ++ + N + ++ D+ + Sbjct: 784 ELYINILEKNYSKLNGA-IKSGKKLALNNILMQLRKCCNHPYLFQGLNTEQQPEDDFLSL 842 Query: 57 ---------KALEVIIEKANAAPIIVAYHFNSDLARLQKA-FPQGRTLDK---------D 97 + K +++ L L+ F G + Sbjct: 843 VAVSGKLQLLQKLLPRLKERGNRVLIFSQMTMMLDILEGFLFYMGFKYARIDGQTSLSAR 902 Query: 98 PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+E+N E +I + + G G++L G + ++ + ++ ++ R Sbjct: 903 QESIKEYNRAESEIFIFLMSTRAGGLGVDL-PGADRVIIYDPDFNP-----FMDLQAQAR 956 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G R V VY LI + +++E +LQ+ + K ++++L+N+ K+ Sbjct: 957 AHRIGQTRPVVVYQLITKCSVEEKILQKSKKKLAVENMLMNSSNKKP 1003 >gi|148693261|gb|EDL25208.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_a [Mus musculus] Length = 1647 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|73986640|ref|XP_867859.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 23 [Canis familiaris] gi|73986642|ref|XP_533915.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 1 [Canis familiaris] Length = 1647 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|21071056|ref|NP_003063.2| transcription activator BRG1 isoform B [Homo sapiens] gi|192807312|ref|NP_001122316.1| transcription activator BRG1 isoform B [Homo sapiens] gi|116242792|sp|P51532|SMCA4_HUMAN RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Mitotic growth and transcription activator; AltName: Full=Protein BRG-1; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 gi|10946128|gb|AAG24789.1|AF254822_1 SMARCA4 isoform 1 [Homo sapiens] gi|119604568|gb|EAW84162.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_a [Homo sapiens] gi|152013071|gb|AAI50299.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Homo sapiens] gi|158261089|dbj|BAF82722.1| unnamed protein product [Homo sapiens] Length = 1647 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|154271652|ref|XP_001536679.1| hypothetical protein HCAG_08461 [Ajellomyces capsulatus NAm1] gi|150409349|gb|EDN04799.1| hypothetical protein HCAG_08461 [Ajellomyces capsulatus NAm1] Length = 889 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 71/206 (34%), Gaps = 30/206 (14%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------DEKIKALEVIIEK--ANAA 69 IE +A + N + H K+ L+ +I + Sbjct: 602 IEKAKTAQLATRL--ACNSPHNFYWPWGDDPSHIDDTLITSSGKMLLLDRLIPCLMSKGH 659 Query: 70 PIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPA 117 I++ F S + IQ +N + + F Sbjct: 660 KILIFSQFKTQLDLLQDYATSLRGWNCCRIDGAVSQVDRQAQIQAFNTDPDYRIFFLSTR 719 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + ++ F W+ ++ + R + G + V VY L + T++ Sbjct: 720 AGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTKPVIVYRLATRGTVE 773 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETI 203 + +L++ +K ++ L++ K +++ Sbjct: 774 QTLLEKADSKRRLEKLVIQKGKFKSL 799 >gi|73986610|ref|XP_867743.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 9 [Canis familiaris] Length = 1601 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 70/218 (32%), Gaps = 29/218 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEV---HD 53 Y Q + G + + ++ ++ N + Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMDVGGMEKQLDLYRAS 1066 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K + L+ I+ K A +++ S + ++ F + + Sbjct: 1067 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1126 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +NE + + G GLNLQ + ++ F W+ + + R + Sbjct: 1127 KTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQDRAHRI 1180 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V L N+++E +L + K + ++ A Sbjct: 1181 GQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1218 >gi|73951129|ref|XP_859020.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 4 [Canis familiaris] Length = 1714 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 613 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLS 672 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 673 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 732 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 733 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 786 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 787 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 830 >gi|296083825|emb|CBI24213.3| unnamed protein product [Vitis vinifera] Length = 1539 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 74/231 (32%), Gaps = 36/231 (15%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + DL + + V+ + N ++ H Sbjct: 669 QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGNRSTNDCGK 728 Query: 51 -----VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 + K+ L+ ++EK + +++ L L + + Sbjct: 729 LERLILSSGKLVLLDKLLEKLHETNHRVLIFSQMVRMLDILAEYMSLRGFQFQRLDGSTK 788 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +N + G G+NL + ++ F W+ + + Sbjct: 789 AELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQ 842 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 843 AMSRAHRIGQREVVNIYRFVTSKSVEENILKRAKQKMVLDHLVIQKLNAEG 893 >gi|50557268|ref|XP_506042.1| YALI0F30261p [Yarrowia lipolytica] gi|49651912|emb|CAG78855.1| YALI0F30261p [Yarrowia lipolytica] Length = 1353 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 63/178 (35%), Gaps = 22/178 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLAR-----------LQKAF 88 EE+ K K ++E + I+ F S + + Sbjct: 1154 EEEDEKLPPSAKALRCVELLEKIKEENPGEKTIIFSQFVSFMNLIGDELDNAGFEYLRYE 1213 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ + I +L + GL L N ++ +W+ + Sbjct: 1214 GSMHADERSRAVTAFREDPSISVLLISLKAGNVGLTLTA-ANHVIIMDPFWNP-----YV 1267 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKETIHV 205 E + R + G +R V V+ ++ + T+++ +L+ + K + + L+ + +++ + Sbjct: 1268 EEQAMDRAHRIGQQRDVTVHKIVIEQTVEDRILELQKRKREMIESALDPSGQRQMARL 1325 >gi|322705041|gb|EFY96630.1| helicase SWR1 [Metarhizium anisopliae ARSEF 23] Length = 1731 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 66/174 (37%), Gaps = 19/174 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 +K + K++ L+ ++ K ++ L L++ Sbjct: 1395 HSIQFPDKRLLQYDCGKLQVLDKLLRKLQAGGHRALIFTQMTKVLDILEQFLNIHGHKYL 1454 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +N + +I S G G+NL G + ++F+ W+ Sbjct: 1455 RLDGATKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPA--- 1510 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y L++++TI+ +L++ K + D+++ + Sbjct: 1511 --MDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQEGE 1562 >gi|255552319|ref|XP_002517204.1| ATP binding protein, putative [Ricinus communis] gi|223543839|gb|EEF45367.1| ATP binding protein, putative [Ricinus communis] Length = 1079 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 81/213 (38%), Gaps = 25/213 (11%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKIKA 58 Y + LQ + ++ + + +++ + N + + K + Sbjct: 578 YQQVTEIGRVGLQTGSGKSKSLQNLSMQLRKCCNHPYLFVGDYNMWRREEIIRAAGKFEL 637 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNE 106 L+ ++ K A +++ + L+ ++ ++++N Sbjct: 638 LDRLLPKLRATGHRVLLFSQMTRLMDILEIYLQLHDFKYLRLDGSTKTEERGTLLKQFNA 697 Query: 107 GKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P + G GLNLQ + ++ F W+ + +++ R + G K+ Sbjct: 698 PDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQKKE 751 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +I+E++L+R + K I ++ A Sbjct: 752 VRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 784 >gi|189191218|ref|XP_001931948.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973554|gb|EDU41053.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1242 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 18/161 (11%) Query: 52 HDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPC 99 KI+ L I+ ++ + +IV F S L ++ + ++ Sbjct: 1012 PSTKIRQLLAILSQETPSHKVIVFSQFTSMLDLIEPFLRRAHYTYTRYDGSMRNDHREAS 1071 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ K +L GLNL + +V +W+ +E + R + Sbjct: 1072 LHKLRSDPKTRVLLCSLKCGSLGLNLTA-ASRVVIMEPFWNP-----FVEEQAIDRVHRL 1125 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V VY L +++++E +L+ K + + + K Sbjct: 1126 NQTVDVTVYRLSIRDSVEERILELQEAKRKLANAAIEGGKA 1166 Score = 38.2 bits (87), Expect = 0.61, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 12/43 (27%), Gaps = 4/43 (9%) Query: 4 YHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYY 42 Y + Q L GE + + ++ Q N Sbjct: 677 YTRLQDRTQARLDEMMGGEKQDYIGALVLLLRLRQACNHPDLV 719 >gi|310793352|gb|EFQ28813.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1599 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 75/225 (33%), Gaps = 34/225 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 ++ Y Y L + + + ++ +++N + + Sbjct: 695 LEYYKNILTRNYAALSNATGQKNSLLNIMMELKKVSNHPYMFPGAEDRVLAGSTRREDQI 754 Query: 52 -----HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 K+ L+ ++ K + ++V L L + Sbjct: 755 KGLIASSGKMMLLDQLLTKLKKDGHRVLVFSQMVKMLDILSDYMALRGYKFQRLDGTIAA 814 Query: 98 ---PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I +N + G G+NL + +V F W+ + + Sbjct: 815 GPRRMAINHFNAEDSDDFCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA-----DLQA 868 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K+ V +Y L+++ T++E VL+R R K ++ L + A Sbjct: 869 MGRAHRIGQKKPVSIYRLVSKETVEEEVLERARNKLLLEYLTIQA 913 >gi|302755712|ref|XP_002961280.1| hypothetical protein SELMODRAFT_403041 [Selaginella moellendorffii] gi|300172219|gb|EFJ38819.1| hypothetical protein SELMODRAFT_403041 [Selaginella moellendorffii] Length = 3598 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 69/223 (30%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--VHD----- 53 Y + + + G A + + ++ + N E + Sbjct: 1389 AYQRLLMKRVKEKMGGIGHAKVRSVQNTVMELRNICNHPYLSHVHTEEAESLLPSHYLPT 1448 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ I+ K + +++ L L+ + Sbjct: 1449 VIRLCGKLEMLDRILPKLKKSNHRVLLFSTMTRLLNVLEDYLTWKGYKYLRLDGHTMGSE 1508 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N L + G G+NLQ + ++ F W+ + ++ Sbjct: 1509 RGSLIDRFNAPDSDAFLFLLSIRAGGIGVNLQA-ADTVIIFDTDWNPQ-----VDLQAQA 1562 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V L NTI+E V K + + + A Sbjct: 1563 RAHRIGQKRDVLVLRLETVNTIEEQVRASAEHKLGVANQSITA 1605 >gi|302803051|ref|XP_002983279.1| hypothetical protein SELMODRAFT_422676 [Selaginella moellendorffii] gi|300148964|gb|EFJ15621.1| hypothetical protein SELMODRAFT_422676 [Selaginella moellendorffii] Length = 3497 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 69/223 (30%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKE--VHD----- 53 Y + + + G A + + ++ + N E + Sbjct: 1405 AYQRLLMKRVKEKMGGIGHAKVRSVQNTVMELRNICNHPYLSHVHTEEAESLLPSHYLPT 1464 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ I+ K + +++ L L+ + Sbjct: 1465 VIRLCGKLEMLDRILPKLKKSNHRVLLFSTMTRLLNVLEDYLTWKGYKYLRLDGHTMGSE 1524 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N L + G G+NLQ + ++ F W+ + ++ Sbjct: 1525 RGSLIDRFNAPDSDAFLFLLSIRAGGIGVNLQA-ADTVIIFDTDWNPQ-----VDLQAQA 1578 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V L NTI+E V K + + + A Sbjct: 1579 RAHRIGQKRDVLVLRLETVNTIEEQVRASAEHKLGVANQSITA 1621 >gi|297703590|ref|XP_002828720.1| PREDICTED: transcription activator BRG1-like isoform 2 [Pongo abelii] Length = 1647 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|154313972|ref|XP_001556311.1| hypothetical protein BC1G_04929 [Botryotinia fuckeliana B05.10] gi|150849075|gb|EDN24268.1| hypothetical protein BC1G_04929 [Botryotinia fuckeliana B05.10] Length = 1065 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 53/156 (33%), Gaps = 18/156 (11%) Query: 53 DEKIKALEVII-EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTI 101 KI L I+ ++A IV F S L + G D ++ Sbjct: 827 STKITHLMKILGKEAAQHKFIVFSQFTSMLDLVEPFLRQKGYKYTRYDGGMKNDLREASL 886 Query: 102 QE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N+ +L GLNL +V +W+ +E + R + Sbjct: 887 DRLRNDENCRVLLCSLKCGSLGLNLTA-ATRVVILEPFWNP-----FVEEQAIDRVHRLT 940 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K V VY + ++T++E +L K + + + Sbjct: 941 QKIDVIVYKITIKDTVEERILLLQEKKRELANQTIE 976 Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 5/45 (11%), Positives = 15/45 (33%), Gaps = 4/45 (8%) Query: 2 KQYHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYY 42 + Y + +R ++ G + ++ ++ Q N Sbjct: 541 RFYERLERRTDASIEEMMGGSKVNYASALVLLLRLRQACNHPKLV 585 >gi|114658987|ref|XP_001170658.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 3 [Pan troglodytes] Length = 1603 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|327198375|ref|YP_004306949.1| putative ATP-dependent helicase [Streptococcus phage Dp-1] gi|314912677|gb|ADT64068.1| putative ATP-dependent helicase [Streptococcus phage Dp-1] Length = 545 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 77/213 (36%), Gaps = 23/213 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + +L ++ + N ++T++ Q ++V K + Sbjct: 335 KIYKEVLTKLVQEI-DKVKLMPNPLAETIRLRQATGNPSIL----TTQDVKSCKFERCIE 389 Query: 62 IIEKA--NAAPIIVAYHFNSDLAR--------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 I+E+ ++ ++ + ++ G T DK + N K + Sbjct: 390 IVEECIQQGKSCVIFSNWEKVIEPLAKILSKTVKCNLVTGETADKFNEIEEFMNHRKASV 449 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G G L ++ S W E+ R + G K +V +Y L+ Sbjct: 450 ILGTIGALGTGFTLTKADTVIFLDSPWTRAEKD------QAEDRCHRIGAKSSVTIYTLV 503 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA--LKKET 202 A+ T+DE + + K + D +++ +K + Sbjct: 504 AKGTVDERIEDLIERKGELADYIVDGKPMKSKI 536 >gi|209882890|ref|XP_002142880.1| SNF2 family helicase [Cryptosporidium muris RN66] gi|209558486|gb|EEA08531.1| SNF2 family helicase, putative [Cryptosporidium muris RN66] Length = 1313 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 79/217 (36%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELY--CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + +++ D+ I+ + ++ ++ ++ N + +E + K+ Sbjct: 749 VYGQIKQKAVHSMDISSGKIQYRSVSNTIMQLRKIVNHPYLFVDEYFARNDDIFKVSCKF 808 Query: 61 VIIEKA------NAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPCTIQEW 104 I+++ +++ + + + + Sbjct: 809 EILDRMIPKLVYFKHKVLIFCQMTQLMDILGDFLDYRDISYYRLDGTMNIQERKEKMDIF 868 Query: 105 NEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G GLNLQ + ++ F W+ + + +R + G K Sbjct: 869 NDPDSNTFVFMLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ-----DLQAQSRAHRMGQK 922 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V+ L++ + ++ELVL+R + K I ++ A K Sbjct: 923 NEVRVFRLVSISGVEELVLKRAQKKLDIDQKIIQAGK 959 >gi|19115202|ref|NP_594290.1| Rad54 homolog Rhp54 [Schizosaccharomyces pombe 972h-] gi|3123262|sp|P41410|RAD54_SCHPO RecName: Full=DNA repair protein rhp54; AltName: Full=RAD54 homolog 1 gi|2239180|emb|CAB10100.1| Rad54 homolog Rhp54 [Schizosaccharomyces pombe] Length = 852 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 44/215 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------------------DEKIK 57 ++ N + + + K+ Sbjct: 554 TGSQPLKAIGLLKKICNHPDLLNLTEDLEGCEALFPPGFIPRELRGRDRNIDSSLSGKML 613 Query: 58 ALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 LE ++ + I++ ++ S L ++ ++K + + Sbjct: 614 VLERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTF 673 Query: 105 NEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + + G G+NL G N L+ F W+ Q + R + G K Sbjct: 674 NDPEKDAFVFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQ-----QALARVWRDGQK 727 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + FVY IA TI+E + QR K ++ +++ Sbjct: 728 KDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDE 762 >gi|224009183|ref|XP_002293550.1| hypothetical protein THAPSDRAFT_263996 [Thalassiosira pseudonana CCMP1335] gi|220970950|gb|EED89286.1| hypothetical protein THAPSDRAFT_263996 [Thalassiosira pseudonana CCMP1335] Length = 1000 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 75/206 (36%), Gaps = 19/206 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y F + +I+A + K + LQ+ ++ + + +E Sbjct: 607 KWYKSFVDR--AEKSEMDIKAIENGGKIIVLLQIIAHCDSIGDKVVVFSQCLKTLSYVEE 664 Query: 62 IIEKANA---APIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQEWNEGKI---P 110 I++ N P + Y+ L +K + + +N I Sbjct: 665 ILQSPNWGGFQPFLPDYNGKQRLGGWEKGKEYLRIDGSVDARERGDLVDTFNTEAIAHSK 724 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL N +V W+ I V R + G + F Y L Sbjct: 725 VFLLSTQAGGLGINLVA-ANRVVLLDSHWNPA-----ISDQAVHRCYRFGQTKPTFCYRL 778 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +A+ +++E + R KS++ DL+++ Sbjct: 779 LAEGSMEEKIYSRAAAKSSLSDLVID 804 >gi|73986638|ref|XP_867851.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 22 [Canis familiaris] Length = 1643 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|32425420|gb|AAH15477.1| HELLS protein [Homo sapiens] Length = 317 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 43 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 102 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 103 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 162 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 163 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 216 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 217 AKRKLEKLIIH 227 >gi|452690|emb|CAA82750.1| DNA repair protein [Schizosaccharomyces pombe] Length = 852 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 44/215 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------------------DEKIK 57 ++ N + + + K+ Sbjct: 554 TGSQPLKAIGLLKKICNHPDLLNLTEDLEGCEALFPPGFIPRELRGRDRNIDSSLSGKML 613 Query: 58 ALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 LE ++ + I++ ++ S L ++ ++K + + Sbjct: 614 VLERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTF 673 Query: 105 NEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + + G G+NL G N L+ F W+ Q + R + G K Sbjct: 674 NDPEKDAFVFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQ-----QALARVWRDGQK 727 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + FVY IA TI+E + QR K ++ +++ Sbjct: 728 KDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDE 762 >gi|326923770|ref|XP_003208107.1| PREDICTED: TATA-binding protein-associated factor 172-like [Meleagris gallopavo] Length = 2308 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 77/258 (29%), Gaps = 68/258 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF---------------NSASKTVKCLQLANGAVYYDEE 45 ++ Y F + E + + + +L N Sbjct: 1987 VQLYEDFAKSRAKCDIDETVSSISLREETEKPKLKATGHVFQALQYLRKLCNHPALVLTT 2046 Query: 46 KHWKEV-----------------HDEKIKALEVIIEKAN----------------AAPII 72 +H + H K+ AL+ ++ I+ Sbjct: 2047 QHPEYKRITEQLAAHNSSLRDIQHAPKLSALKQLLLDCGLGNGGSSESGTEAVVAQHRIL 2106 Query: 73 VAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + S L ++ + + ++N + I +L Sbjct: 2107 IFCQLKSMLDIVEHDLLRPQLPSVTYLRLDGSIPAGQRHSIVSQFNNDPSIDVLLLTTHV 2166 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + +VF W+ + + R + G KR V VY LI + T++E Sbjct: 2167 GGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGTLEE 2220 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I + +++ Sbjct: 2221 KIMGLQKFKMNIANTVIS 2238 >gi|297829816|ref|XP_002882790.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata subsp. lyrata] gi|297328630|gb|EFH59049.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata subsp. lyrata] Length = 2057 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 66/167 (39%), Gaps = 11/167 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +Q G + + + K +I + V F + Sbjct: 1071 RLIQFDCGKLQ----ELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDG 1126 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ +Q +N KI L S G G+NL G + ++F+ W+ ++ Sbjct: 1127 STPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPA-----MD 1180 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G R V +Y LI+++TI+E +L++ K + +L++ Sbjct: 1181 QQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRVLDNLVIQ 1227 >gi|109090020|ref|XP_001094924.1| PREDICTED: lymphoid-specific helicase isoform 6 [Macaca mulatta] Length = 821 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 547 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 606 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 607 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNMDPEVFIFLVSTRAGGLGINL 666 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NT+D+ +++R Sbjct: 667 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTVDQKIVERAA 720 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 721 AKRKLEKLIIH 731 >gi|307206264|gb|EFN84329.1| Helicase domino [Harpegnathos saltator] Length = 4084 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 11/168 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +Q G + + K D +I + V F + + Sbjct: 1695 RLIQYDCGKLQSLDRLLRKLKSDNHRV----LIFTQMTRMLDVLEAFLNFHGHIYLRLDG 1750 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +D+ ++ +N + +I S G G+NL G + ++F+ W+ ++ Sbjct: 1751 TTRVDQRQVLMERFNGDKRIFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPT-----MD 1804 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V +Y L+++ T++E +L++ K + DL + Sbjct: 1805 AQAQDRCHRIGQTRDVHIYRLVSEKTVEENILKKANQKRLLGDLAIEG 1852 >gi|170031684|ref|XP_001843714.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus] gi|167870885|gb|EDS34268.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus] Length = 2039 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 70/222 (31%), Gaps = 38/222 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------- 50 K + ++ G + ++ + N A+ + + Sbjct: 857 KNFDALRK-------GMKGSINTFLNIVIELKKCCNHALLTRPTEFETQTNQDEVVVQLL 909 Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 K+ L+ ++ K +++ L L + + + Sbjct: 910 KGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHFSFQRLDGSIKGELRK 969 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL + ++ F W+ + + R Sbjct: 970 QALDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQARA 1023 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 1024 HRIGQKNQVNIYRLVTAKSVEEDIVERAKKKMVLDHLVIQRM 1065 >gi|164688165|ref|ZP_02212193.1| hypothetical protein CLOBAR_01810 [Clostridium bartlettii DSM 16795] gi|164602578|gb|EDQ96043.1| hypothetical protein CLOBAR_01810 [Clostridium bartlettii DSM 16795] Length = 700 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 76/206 (36%), Gaps = 20/206 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y+ F L + N + S K L+ + + K++ L Sbjct: 479 KVYNTFLSILKKQIIENNSDNVTLFSYLTKLRMLSISPELVVKNYK---GKNSKLEMLIK 535 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIP 110 II+ + I+V F L + K F + K ++++N Sbjct: 536 IIKSSKDRKILVFSQFTQVLGLIAKRFEKENIEFNYLDGKIDAKKRLELVEDFNQNKSKK 595 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G GLNL +++V F W++ +E R + G K V V L Sbjct: 596 VFLISLKAGGTGLNLTS-ASMVVHFDPWFNPA-----VEDQASDRAHRIGQKNIVDVIKL 649 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 I+++T++E V K + D ++N Sbjct: 650 ISKDTVEEKVEAIKEYKKELADDIIN 675 >gi|159111807|ref|XP_001706134.1| Transcriptional activator, putative [Giardia lamblia ATCC 50803] gi|157434227|gb|EDO78460.1| Transcriptional activator, putative [Giardia lamblia ATCC 50803] Length = 1859 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 71/164 (43%), Gaps = 19/164 (11%) Query: 51 VHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 K+ AL+ ++ P+++ L L+ G ++K Sbjct: 1663 KDSGKLTALDKLLHNLYKTREPVLIYCQMTKMLDLLEDYLVFRRYNYVRLDGGDAVNKRG 1722 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + + I + + GLNL + ++F+ W+ + + + R Sbjct: 1723 QIVERFMTDDTIFVFLLSTRAASLGLNLTR-ASTVIFYENDWNPTQ-----DAQAMDRVH 1776 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K++V +Y L+ + +IDE +L++ R+K +Q+L+L +++ Sbjct: 1777 RLGQKKSVVIYRLVTEGSIDEKILEKARSKEIVQELVLRGQRRD 1820 >gi|281347253|gb|EFB22837.1| hypothetical protein PANDA_019651 [Ailuropoda melanoleuca] Length = 810 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 73/248 (29%), Gaps = 55/248 (22%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVY------------------ 41 ++ Y K + + +L N Sbjct: 456 IELYRKLLNSQAVRFCLQGLLGNSPHLICIGALKKLCNHPCLLFNSIKEKEYSSTWDGNE 515 Query: 42 --------------YDEEKHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLAR 83 + E K++ L ++ + +++ ++ L Sbjct: 516 ERSLYEGLVDVFPADYNPLMFMEEESGKLQVLMKLLAVIHELRPTEKVVLVSNYTQTLNI 575 Query: 84 -LQKAFPQGRTLDK---------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 + G T + + +N + + G GLNL GG+ Sbjct: 576 LQEVCKRHGYTYTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNL-IGGSH 634 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 635 LILYDIDWNPAT-----DIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLS 689 Query: 192 DLLLNALK 199 +++ K Sbjct: 690 GAVVDLTK 697 >gi|195354288|ref|XP_002043630.1| GM15785 [Drosophila sechellia] gi|194127798|gb|EDW49841.1| GM15785 [Drosophila sechellia] Length = 1921 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 68/226 (30%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Q++ Y + +N EA NS + + + N + + Sbjct: 921 AMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGL 980 Query: 57 KAL---------------EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 + + KA +++ L L+ + + Sbjct: 981 YEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGG 1040 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + + G G+NL + ++ + W+ + Sbjct: 1041 ITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1094 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1095 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1140 >gi|73951141|ref|XP_859244.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 9 [Canis familiaris] Length = 1807 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 711 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLS 770 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 771 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 830 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 831 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 884 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 885 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 928 >gi|302794214|ref|XP_002978871.1| hypothetical protein SELMODRAFT_109740 [Selaginella moellendorffii] gi|300153189|gb|EFJ19828.1| hypothetical protein SELMODRAFT_109740 [Selaginella moellendorffii] Length = 587 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/255 (12%), Positives = 72/255 (28%), Gaps = 70/255 (27%) Query: 2 KQYHKFQRELYCDLQG------ENIEAFNSASKTVKCLQLANGAVYY------------- 42 + Y E + + FN S ++ Q+ N Sbjct: 310 ELYEDLMEEYEARISEYSSEGTLQMNKFNMLSMLLRLRQMCNHPALLDSDHLFQVEDDDL 369 Query: 43 ---------------------------------DEEKHWKEVHDEKIKALEVII-EKANA 68 + K + K+KA ++ + Sbjct: 370 IMDEDGSEDGSGHQQMREALSKLQLEAQERQEEFDRKVQEIGQSAKLKAAMRVLDMTPHG 429 Query: 69 APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 ++ + S L ++ + K I+ + + ++ ++ Sbjct: 430 EKSLIFSQWTSMLDLIEPELEEAGIQFSRIDGSMSTRKRVEAIKRFSEDPEVAVMLISLR 489 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL ++ +WW+ E + R + G R V V + + T++ Sbjct: 490 AGGCGLNLVA-ATRVLLMDMWWNPTT-----EDQAIDRTHRIGQTRPVHVTRFVVKQTVE 543 Query: 178 ELVLQRLRTKSTIQD 192 E +LQ K + + Sbjct: 544 ERILQIQEEKKKLVE 558 >gi|123416804|ref|XP_001304972.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121886460|gb|EAX92042.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1107 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 69/187 (36%), Gaps = 23/187 (12%) Query: 30 VKCLQLANGAVYYDEE---KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARL 84 ++ + N + + K + L+ I+ K I++ L L Sbjct: 670 MQLRKCCNHPYLFYDTWFVNLDLVRTSGKCEVLDRILPKLKATGHRILIFSQMTEVLTLL 729 Query: 85 QKAFPQ----------GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNIL 132 Q D+ I ++N + + + + G GLNLQ + + Sbjct: 730 QDLLTWRDYKYLRLDGNTKSDQRQQLIADFNKEDSEYFIFLLSTRAGGLGLNLQT-ADTV 788 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + W+ ++ +R + G ++ V V L+ +I+E V++R K T+++ Sbjct: 789 ILYDNDWNP-----FADQQARSRVHRIGQEKPVLVISLVTAGSIEERVVERADDKKTVEN 843 Query: 193 LLLNALK 199 ++ + Sbjct: 844 KIIEIGR 850 >gi|15226870|ref|NP_178318.1| ETL1; ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|4038042|gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gi|16648975|gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gi|27311941|gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gi|330250451|gb|AEC05545.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 763 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K + L ++ K + +++ + S L L+ + Sbjct: 587 SAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTI 646 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N K I + G GLNL G + ++ + ++ + I+R R + Sbjct: 647 VDTFNNDKSIFACLLSTRAGGQGLNLT-GADTVIIHDMDFNPQ-----IDRQAEDRCHRI 700 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V ++ L+ ++T+DE + + + K + +L + Sbjct: 701 GQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLES 738 >gi|311253615|ref|XP_003125618.1| PREDICTED: DNA repair and recombination protein RAD54B-like, partial [Sus scrofa] Length = 838 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 73/248 (29%), Gaps = 55/248 (22%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 ++ Y K + +E + +L N KE Sbjct: 557 IELYRKLLNSQAVRFCLQGLMENSSHLICIGALKKLCNHPCLLFSSVKEKECSSAWDENE 616 Query: 55 -KIKALEVIIEKANAAPIIVA------------------------------YHFNSDLAR 83 + +++ ++ ++ L Sbjct: 617 ERRLYEDLLKVFPPDYNPLMFAEEESGKLQVLSKLLAVIHELRPAEKVVLVSNYTQTLNI 676 Query: 84 LQKAFPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 LQ+ + + + + +N + + G GLNL GG+ Sbjct: 677 LQEVCRRHGYGCTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNL-IGGSH 735 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 736 LILYDIDWNPAT-----DIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLS 790 Query: 192 DLLLNALK 199 +++ K Sbjct: 791 GAVVDLTK 798 >gi|296485891|gb|DAA28006.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 [Bos taurus] Length = 1605 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 999 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1058 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1059 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1118 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1119 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1174 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1175 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1223 >gi|238881028|gb|EEQ44666.1| chromatin remodelling complex ATPase chain ISW1 [Candida albicans WO-1] Length = 1056 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 80/228 (35%), Gaps = 39/228 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 Q E Y L ++I+A N + ++ + N + Sbjct: 386 DMQVEWYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 445 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ ++ KA + +++ + L L+ + Sbjct: 446 EHLVYNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSH 505 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N + + G G+NL +I++ + W+ + + Sbjct: 506 EDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQA 559 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G K+ V V+ + + I+E VL+R K + L++ ++ Sbjct: 560 MDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQQGRQ 607 >gi|194036393|ref|XP_001929392.1| PREDICTED: transcription termination factor 2-like [Sus scrofa] Length = 1166 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 66/238 (27%), Gaps = 67/238 (28%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------------------------- 53 + S+ ++ Q E+ Sbjct: 916 STVHILSQLLRLRQCCCHLSLLKSALDPTELKSEGLVLSLEEQLSALTLSELHSSESSAS 975 Query: 54 -----------------------EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + LE I + + ++ + S L + + Sbjct: 976 VSLNGTCFKVELFDSMRQSTKISSLLAELEAIRRNSGSQKSVIVSQWTSMLEVVALHLKR 1035 Query: 91 GRTLD----------KDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R + ++ +N G ++ + G GLNL GGN L + W Sbjct: 1036 HRVTYATIDGSVNPKQRMDLVEAFNSSGGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHW 1094 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + E R + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1095 NPSL-----EDQASDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQILSG 1147 >gi|157785561|ref|NP_001099084.1| transcription activator BRG1 [Bos taurus] gi|288559138|sp|A7Z019|SMCA4_BOVIN RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 gi|157278973|gb|AAI53217.1| SMARCA4 protein [Bos taurus] Length = 1606 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 999 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1058 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1059 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1118 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1119 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1174 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1175 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1223 >gi|149755450|ref|XP_001490674.1| PREDICTED: similar to Probable global transcription activator SNF2L4 (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin-dependent regula isoform 1 [Equus caballus] Length = 1647 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A + +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATSHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|50414862|gb|AAH77794.1| HELLS protein [Xenopus laevis] Length = 756 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 63/191 (32%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 567 MMLLRKCCNHPYLIEYPLDPLTQNFKIDEELVNSSGKFLLLDRLLPEMKKRGHKVLIFSQ 626 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + ++ +N + + + + G G+NL Sbjct: 627 MTMMLDILMDYCYYKKFNFCRLDGSMSYTDREENMRSFNTDPDVFIFLVSTRAGGLGINL 686 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G R V VY L+ NTID+ +++R Sbjct: 687 TA-ADTVIIYDSDWNPQA-----DLQAQDRCHRIGQTRPVVVYRLVTANTIDQKIVERAA 740 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 741 AKRKLEKLVIH 751 >gi|328718561|ref|XP_003246514.1| PREDICTED: putative DNA helicase Ino80-like isoform 2 [Acyrthosiphon pisum] Length = 1314 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 29/179 (16%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 S K Q ++ + + ++ + I+E+ + R + Sbjct: 1021 SLLTKLKQ-----------ENHRVLIYSQMTRMIDILEEYMWYKKL----------RYMR 1059 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ N I + + G G+NL + ++F+ W+ Sbjct: 1060 LDGSSKISERRDMVADFQNRSDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT---- 1114 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETI 203 +++ + R + G + V VY LI QN+I+E +LQR + KS IQ ++++ LK +T+ Sbjct: 1115 -VDQQAMDRAHRLGQTKQVTVYRLITQNSIEERILQRAKEKSEIQRMVISGGNLKPDTL 1172 >gi|253745191|gb|EET01274.1| Transcriptional activator, putative [Giardia intestinalis ATCC 50581] Length = 1837 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 71/164 (43%), Gaps = 19/164 (11%) Query: 51 VHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 K+ AL+ ++ P+++ L L+ G ++K Sbjct: 1641 KDSGKLIALDKLLHNLYKTREPVLIYCQMTKMLDLLEDYLVFRRYNYVRLDGGDAVNKRG 1700 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + + I + + GLNL + ++F+ W+ + + + R Sbjct: 1701 QIVERFMTDDTIFVFLLSTRAASLGLNLTR-ASTVIFYENDWNPTQ-----DAQAMDRVH 1754 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K++V +Y L+ + +IDE +L++ R+K +Q+L+L +++ Sbjct: 1755 RLGQKKSVVIYRLVTEGSIDEKILEKARSKEIVQELVLRGQRRD 1798 >gi|164660806|ref|XP_001731526.1| hypothetical protein MGL_1709 [Malassezia globosa CBS 7966] gi|159105426|gb|EDP44312.1| hypothetical protein MGL_1709 [Malassezia globosa CBS 7966] Length = 872 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-------- 95 + ++ KI+ L II++ +++ F S L L Sbjct: 681 PESEWMNSGKIQQLRKIIDEVVERRDRMLIFSQFTSVLDILCVCLEHMGVKYVGFTGQTN 740 Query: 96 --KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++ + IP+ + G G+NL N +V F ++ + ++ Sbjct: 741 VGDRQVLVDKFTSDPTIPVFLLSTRAGGLGINLVA-ANWVVLFDQDFNPQN-----DKQA 794 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + V V LI++ TIDE +L K + D + Sbjct: 795 TDRCYRIGQTKPVTVVRLISRGTIDEDILALAHRKLELADRV 836 >gi|148709693|gb|EDL41639.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, isoform CRA_b [Mus musculus] Length = 1235 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 656 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 715 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 716 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 775 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 776 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 831 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 832 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 880 >gi|37542688|gb|AAL47203.1| chromatin-remodeling factor CHD3 [Oryza sativa Indica Group] Length = 1111 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 29/222 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------VH 52 + Y + Y L + + + ++ +L A DE + Sbjct: 547 EYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLES 606 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCT 100 K++ L+ ++ K +++ F L + + Sbjct: 607 SGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIR 666 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +N + G G+NL + ++ + W+ + + R + Sbjct: 667 IDRFNAKNSTRFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HADLQAMARAHR 720 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G V +Y L+++ TI+E ++Q + K ++ L++ L K Sbjct: 721 LGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTK 762 >gi|728695|emb|CAA88537.1| DNA helicase type protein [Saccharomyces cerevisiae] Length = 674 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K++ L+ ++ K + +++ + + +++ + + Sbjct: 483 SAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 542 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 543 VHDWQTNPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 596 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V VY L+ + TI+E + R + K +Q +++ +E Sbjct: 597 GQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQE 638 >gi|189189128|ref|XP_001930903.1| chromo domain-containing protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972509|gb|EDU40008.1| chromo domain-containing protein 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1570 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGENIE-AFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 ++ Y Y L + + + ++ + +N A+ + ++ Sbjct: 685 LEYYKNILTRNYEALNEGGVGHKQSLLNIVMELKKASNHALLFPNAENKLVKPGSSKEET 744 Query: 53 -------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K A+ +++ L L + Sbjct: 745 LKALITSSGKMMLLDRLLGKLKADGHRVLIFSQMVHMLDILTDYLKLRNYSFQRLDGTVP 804 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I +N + G G+NL + +V F W+ + + Sbjct: 805 AADRKIAIDHFNAPGSEDYCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA-----DLQ 858 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G ++ V VY L++++TI+E +L+R R K + Sbjct: 859 AMARAHRIGQQKPVSVYRLVSKDTIEEEILERARNKRML 897 >gi|156046805|ref|XP_001589764.1| hypothetical protein SS1G_09486 [Sclerotinia sclerotiorum 1980] gi|154693881|gb|EDN93619.1| hypothetical protein SS1G_09486 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1054 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 53/156 (33%), Gaps = 18/156 (11%) Query: 53 DEKIKALEVII-EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTI 101 KI L I+ ++A IV F S L + G D ++ Sbjct: 816 STKITHLMKILGKEAAQHKFIVFSQFTSMLDLVEPFLRQKGFKYTRYDGGMKNDLREASL 875 Query: 102 QE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N+ +L GLNL +V +W+ +E + R + Sbjct: 876 DRLRNDENCRVLLCSLKCGSLGLNLTA-ATRVVILEPFWNP-----FVEEQAIDRVHRLT 929 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K V VY + ++T++E +L K + + + Sbjct: 930 QKIDVVVYKITIKDTVEERILLLQEKKRELANQTIE 965 Score = 41.7 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 5/45 (11%), Positives = 14/45 (31%), Gaps = 4/45 (8%) Query: 2 KQYHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYY 42 K Y + + ++ G + ++ ++ Q N Sbjct: 540 KFYERLEARTDASIEEMMGGSKVNYASALVLLLRLRQACNHPKLV 584 >gi|145350886|ref|XP_001419826.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580058|gb|ABO98119.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 821 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 66/208 (31%), Gaps = 23/208 (11%) Query: 3 QY-HKFQRELYCDLQG-----ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + +++ + G ++ E+ + +L N A E + Sbjct: 519 LYVDQLKQKSMLSMLGRIGKTQDAESISPLQAIQTLQKLCNAAALATEVSDPVASSSKLA 578 Query: 57 KALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNE 106 + AN I+V F + L + ++ +N Sbjct: 579 VLRAMFRALANDERIVVVSGFTTTLDLIAKLCESEHLKYDRLQGSTPPKERTSIVRTFNN 638 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL G N LV W+ + R + G + Sbjct: 639 SG-KILLLSTKAGGVGLNL-VGANRLVLVDSSWNPAH-----DLQAQARVWREGQTKPCS 691 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +Y L++ TI+E + QR K + L Sbjct: 692 IYRLLSTGTIEERMFQRQELKGALARTL 719 >gi|116193103|ref|XP_001222364.1| hypothetical protein CHGG_06269 [Chaetomium globosum CBS 148.51] gi|88182182|gb|EAQ89650.1| hypothetical protein CHGG_06269 [Chaetomium globosum CBS 148.51] Length = 1203 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 64/193 (33%), Gaps = 27/193 (13%) Query: 32 CLQLANGA-------VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 QL N A Y K+ + ++++ I+ + + L Sbjct: 998 LKQLRNDADRNKEARRRYMRYLRDNWEDSAKVTRVIDLLKEIQETGEKTIIFSQWTTLLD 1057 Query: 83 ------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 R + + +D + ++ + GLNL + Sbjct: 1058 MIECQIKDKLNLRYCRYTGKMSRNQRDEAVQDFIENPRNTVMLVSLRAGNAGLNLT-VAS 1116 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ +W+ IE V R + G +R V V+ ++ + T+++ +L K + Sbjct: 1117 RIIICDPFWNP-----FIEAQAVDRAHRIGQQREVKVHRILVKETVEDRILALQNNKRKL 1171 Query: 191 QDLLLNALKKETI 203 + L+ + + + Sbjct: 1172 VEAALDEGQSKNV 1184 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 3/44 (6%), Positives = 8/44 (18%), Gaps = 6/44 (13%) Query: 4 YHKFQRELYCDLQG----ENI--EAFNSASKTVKCLQLANGAVY 41 Y + + + N ++ Q Sbjct: 725 YRDLESKSQVQFNKFLRAGTVGKNYSNILVLLLRLRQACCHPHL 768 >gi|324499657|gb|ADY39859.1| Chromodomain-helicase-DNA-binding protein 8 [Ascaris suum] Length = 2707 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 27/231 (11%), Positives = 65/231 (28%), Gaps = 42/231 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--EEKHWKEVHDEKIKAL 59 K Y + L + + ++ + N + EE+ E+ Sbjct: 1367 KYYRAILERNFSHLCKGT-SVPSLMNTMMELRKCCNHPFLINGAEEQIISEMKTVHPDWS 1425 Query: 60 EVIIEKA---------------------NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 E + + + +++ L +++ + Sbjct: 1426 EEELYQHALVQSSGKLVLIAKLLPKLRADGHKVLIFSQMVRVLDIIEEFLVVQNYTFERI 1485 Query: 98 ---------PCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I + + + + G G+NL + ++ F W+ + Sbjct: 1486 DGNVRGDLRQTAIDRFSKKDSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN--- 1541 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V VY LI NT + + + K + +L + Sbjct: 1542 --DLQAQARCHRIGQTKMVKVYRLITCNTYEREMFDKASLKLGLDKAVLQS 1590 >gi|296421483|ref|XP_002840294.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636509|emb|CAZ84485.1| unnamed protein product [Tuber melanosporum] Length = 1154 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 72/220 (32%), Gaps = 33/220 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------------KH 47 K Y E + ++A+ ++ Q A + + + Sbjct: 894 KDYLDLAAEAIAARAAGQKASKSNANVMMQLRQAAIHPLLFRKHYTDAKILQMSHAILGE 953 Query: 48 WKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ-KAFPQGRTLDK-------- 96 + + K++AL ++ + +++ F L L+ G + Sbjct: 954 DEWMASGKVEALSKLLIEMREKGDRVLIFSQFTQVLDLLELVMTTHGFGFLRIDGSTPVD 1013 Query: 97 -DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I ++ E I + G G+NL N ++ F ++ + + Sbjct: 1014 MRQDMIDQYHEEEDIMTFLLSTKAGGFGINL-ACANKVIIFDSSFNPHD-----DAQASD 1067 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E +L TK + + Sbjct: 1068 RAHRVGQTREVEVIRLVTKGTIEEQILALANTKLALDQSI 1107 >gi|62740093|gb|AAH94093.1| LOC733207 protein [Xenopus laevis] Length = 1416 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 74/224 (33%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 720 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKAPEENEFYNRQEALQH 779 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + + Sbjct: 780 LIRSSGKLILLDKLLVRLRERGNRVLIFSQMVRMLNILAEYLKSRQFPFQRLDGSIKGEI 839 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 840 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 893 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +++R + K + L++ + Sbjct: 894 RAHRIGQKKQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRM 937 >gi|289613314|emb|CBI59727.1| unnamed protein product [Sordaria macrospora] Length = 1846 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 67/173 (38%), Gaps = 30/173 (17%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA 87 + LQ G K++AL+ ++ K ++ L Sbjct: 1503 KRLLQYDCG----------------KLQALDKLLRKLQAGGHRALIFTQMTKYLRLDG-- 1544 Query: 88 FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +++ +N + +I S G G+NL G + ++F+ W+ Sbjct: 1545 ---ATKVEQRQILTDRFNHDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPA---- 1596 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y L++++TI+ +L++ K + D+++ + Sbjct: 1597 -MDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQEGE 1648 >gi|242013509|ref|XP_002427447.1| Helicase, putative [Pediculus humanus corporis] gi|212511833|gb|EEB14709.1| Helicase, putative [Pediculus humanus corporis] Length = 2228 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 +A+ + + K++ L+ ++ K N +++ L L+ Sbjct: 1520 LHPIASSMCTQFPDPRLIQYDCGKLQVLDKLLRKLKMNHHKVLLFTQMTRMLDILEAFLN 1579 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ +N + +I S G G+NL G + ++F+ Sbjct: 1580 YHGHIYLRLDGTTKVDQRQVLMERFNGDKRIFCFILSTRSGGIGVNLT-GADTVIFYDSD 1638 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ T++E +L++ K + DL + Sbjct: 1639 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISEMTVEENILKKANQKRLLGDLAIEG 1692 >gi|195379440|ref|XP_002048487.1| GJ13998 [Drosophila virilis] gi|194155645|gb|EDW70829.1| GJ13998 [Drosophila virilis] Length = 2012 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 74/226 (32%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS---------KTVKCLQLANGAVYYDEE--------KHW 48 Q++ Y + +N EA NS S + + N + Sbjct: 980 AMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEAPTSAGGI 1039 Query: 49 KEVHD-----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 E++ K+ L ++++ + +++ L L+ + + Sbjct: 1040 YEINSLTKAAGKLVLLSKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGS 1099 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + + G G+NL + ++ + W+ + Sbjct: 1100 ITGTVRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1153 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1154 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1199 >gi|4584529|emb|CAB40760.1| putative protein [Arabidopsis thaliana] gi|7270094|emb|CAB79908.1| putative protein [Arabidopsis thaliana] Length = 1067 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 72/219 (32%), Gaps = 32/219 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------- 54 + Y Y L + + + +K Q+ + + + E +E Sbjct: 354 EVYKAVITNNYQVLTKKRDAKIS--NVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLE 411 Query: 55 -----KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPC 99 ++ ++ K +++ F L L+ F + + Sbjct: 412 ASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQV 471 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + + R Sbjct: 472 RIDRFNAENSNRFCFLLSTRAGGIGINL-ATADTVIIYDSDWNP-----HADLQAMARVH 525 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G V +Y LI + T++E +++ + K ++ L++ Sbjct: 526 RLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVG 564 >gi|68006105|ref|NP_001018299.1| SNF2 family helicase Ino80 [Schizosaccharomyces pombe 972h-] gi|206557976|sp|O14148|INO80_SCHPO RecName: Full=Putative DNA helicase ino80 gi|159884046|emb|CAB16246.2| SNF2 family helicase Ino80 [Schizosaccharomyces pombe] Length = 1604 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 65/165 (39%), Gaps = 19/165 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDP 98 K+ L+ ++ + AN +++ + + +++ + + Sbjct: 1427 DSGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRD 1486 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1487 MVTEWQTRPELFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPS-----IDSQAMDRAHR 1540 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G ++ V VY I + TI+E ++ R + K +Q ++++ + Sbjct: 1541 IGQQKQVTVYRFITRGTIEERIVIRAKEKEEVQKVVISGGETRPT 1585 Score = 36.3 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 8/71 (11%), Positives = 22/71 (30%), Gaps = 6/71 (8%) Query: 3 QYHKFQRE-LYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y +R+ +L + I + + ++ ++ N ++ E + Sbjct: 1099 LYQALRRQISIAELLEKAILGGDDTVASIMNLVMQFRKVCNHPDLFEREDVRSPLSLATW 1158 Query: 57 KALEVIIEKAN 67 I + N Sbjct: 1159 SKSIYINREGN 1169 >gi|15217826|ref|NP_171767.1| DNA repair protein, putative [Arabidopsis thaliana] gi|332189335|gb|AEE27456.1| putative DNA repair protein [Arabidopsis thaliana] Length = 678 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 59/170 (34%), Gaps = 21/170 (12%) Query: 50 EVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------- 94 KI+AL ++E+ +A IV F S L + A + Sbjct: 503 FKTSTKIEALREEIRFMVERDWSAKAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKA 562 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 KD E +L + G LNL + + WW+ +ER Sbjct: 563 AKDAALKNFKEEPDCRVLLMSLQAGGVALNLTA-ASHVFMMDPWWNPA-----VERQAQD 616 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G + V V I + T++E +L + K + + L ++ + Sbjct: 617 RIHRIGQCKPVRVVRFIMEKTVEEKILTLQKKKEDLFESTLGDSEEAVVQ 666 >gi|68479793|ref|XP_716066.1| hypothetical protein CaO19.7401 [Candida albicans SC5314] gi|46437717|gb|EAK97058.1| hypothetical protein CaO19.7401 [Candida albicans SC5314] Length = 1056 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 80/228 (35%), Gaps = 39/228 (17%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYY--------DEEK 46 Q E Y L ++I+A N + ++ + N + Sbjct: 386 DMQVEWYKRLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD 445 Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ ++ KA + +++ + L L+ + Sbjct: 446 EHLVYNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSH 505 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E+N + + G G+NL +I++ + W+ + + Sbjct: 506 EDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTS-ADIVILYDSDWNPQA-----DLQA 559 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G K+ V V+ + + I+E VL+R K + L++ ++ Sbjct: 560 MDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQQGRQ 607 >gi|322697599|gb|EFY89377.1| helicase SWR1 [Metarhizium acridum CQMa 102] Length = 1732 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 67/171 (39%), Gaps = 11/171 (6%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 + LQ G + + K + + + +I + + F + Sbjct: 1403 KRLLQYDCGKLQVLD----KLLRKLQAGSHRALIFTQMTKVLDILEQFLNIHGHKYLRLD 1458 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +++ +N + +I S G G+NL G + ++F+ W+ + Sbjct: 1459 GATKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPA-----M 1512 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ R + G R V +Y L++++TI+ +L++ K + D+++ + Sbjct: 1513 DKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQEGE 1563 >gi|224062717|ref|XP_002197759.1| PREDICTED: chromodomain helicase DNA binding protein 2 [Taeniopygia guttata] Length = 1826 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 721 KQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGLETLQS 780 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 781 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 840 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 841 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 894 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 895 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 938 >gi|255551623|ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis] gi|223543945|gb|EEF45471.1| conserved hypothetical protein [Ricinus communis] Length = 3502 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 74/223 (33%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVY----YDEEKHWKEVH---- 52 Y K + + G A + + ++ + N DE + H Sbjct: 1252 AYQKLLMKRVEENLGSIGNSKARSVHNSVMELRNICNHPYLSQLHVDEVDNLIPKHFLPP 1311 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ I+ K ++ L +++ + ++ Sbjct: 1312 IIRLCGKLEMLDRILPKLKATDHRVLFFSTMTRLLDVMEEYLTMKKYRYLRLDGHTSGNE 1371 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I+++N+ P + + G G+NLQ + ++ F W+ + ++ Sbjct: 1372 RGALIEQFNKSNSPYFIFLLSIRAGGVGVNLQA-ADTVIIFDTDWNPQ-----VDLQAQA 1425 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V T++E V K + + + A Sbjct: 1426 RAHRIGQKRDVLVLRFETVQTVEEQVRASAEHKLGVANQSITA 1468 >gi|85014495|ref|XP_955743.1| transcriptional activator [Encephalitozoon cuniculi GB-M1] gi|19171437|emb|CAD27162.1| GLOBAL TRANSCRIPTIONAL ACTIVATOR (SNF2/RAD54 family) [Encephalitozoon cuniculi GB-M1] Length = 883 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 63/158 (39%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA-FPQGRTLDK---------DPC 99 K+ L+ ++ K A +++ + + ++ +G T + Sbjct: 724 DSGKLVVLDELLPKLKAEGHRLLMYFQMTRMIDLIEDYLVRKGYTYLRLDGSLKASARAE 783 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I++W + + G G+NL + +VF+ W+ Q + R + Sbjct: 784 VIRDWQASDKFIFLLSTRAGGLGINLTA-ADTVVFYDSDWNPTADQ-----QAMDRAHRL 837 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + T++E VL+ K IQ ++++ Sbjct: 838 GQTRDVTVYRLITRGTVEEKVLESANRKDEIQKMVIHG 875 >gi|307109027|gb|EFN57266.1| hypothetical protein CHLNCDRAFT_143830 [Chlorella variabilis] Length = 491 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 63/196 (32%), Gaps = 32/196 (16%) Query: 24 NSASKTVKCLQLANGAVYYDEEKH-------------WKEVHDEKIKALEVIIEKA---N 67 + + ++ N Y + K+ L V++ ++ Sbjct: 126 QTLTVLTNLRKICNHPALYAPGGGEGQEAGGEQQEAEFDPDQSGKMAVLGVVLRESISGA 185 Query: 68 AAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 ++V + L G + K + +N + + Sbjct: 186 GERVVVVSQSTAALDLKLCDGCGFKTVRIDGGTDVGKRQDVVNSFNRHG--VFLLSTTAG 243 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL G N LV W+ ++ + R + G K+A VY L+ T+DE Sbjct: 244 GAGLNLT-GANRLVLLDSHWNPA-----MDLQAMARVWRDGQKKACVVYRLLTTGTLDEK 297 Query: 180 VLQRLRTKSTIQDLLL 195 + QR K I ++ Sbjct: 298 MYQRQLKKGDIAATMM 313 >gi|213405783|ref|XP_002173663.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces japonicus yFS275] gi|212001710|gb|EEB07370.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces japonicus yFS275] Length = 853 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 69/210 (32%), Gaps = 44/210 (20%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH-----------------------DEKIKALEVI 62 +L N + ++ K+ LE + Sbjct: 567 LKAIGILKKLCNHPDLLHITEDFEGCEKLFPQGFVPKEHRGRDRHVDSSLSGKMLVLERM 626 Query: 63 IEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI 109 + + I++ ++ S L ++ + K + E+N+ + Sbjct: 627 LYRIKKETDDKIVLISNYTSTLDLFEQVCRTRGYKALRLDGTMNVSKRQRLVDEFNDPEK 686 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL G N L+ F W+ Q + R + G K+ FV Sbjct: 687 DAFVFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQ-----QALARVWRDGQKKDCFV 740 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Y IA TI+E + QR K ++ +++ Sbjct: 741 YRFIATGTIEEKIFQRQSHKQSLSSCVVDE 770 >gi|281208073|gb|EFA82251.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 2100 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 57/141 (40%), Gaps = 7/141 (4%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 +I I + F L+ + ++ + I + +CG Sbjct: 1792 LIYCQMTKMINILEDFVIFRKYKYLRLDGSSKLEDRRDLVDDFQTDPSIFVFLLSTRACG 1851 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + ++FF W+ ++ + R + G + V VY LI + T++E V Sbjct: 1852 IGINLTS-ADTVIFFDSDWNPT-----MDEQAMDRCHRLGQLKPVTVYRLITKGTVEEKV 1905 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 ++R + K IQ +++ K E Sbjct: 1906 IKRAKQKHQIQSIVIAGGKFE 1926 >gi|149638830|ref|XP_001506039.1| PREDICTED: similar to RAD54B protein [Ornithorhynchus anatinus] Length = 883 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 76/254 (29%), Gaps = 56/254 (22%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 ++ Y K +E +L N + KE + Sbjct: 455 IELYRKLLNSRAISFCLQGMLENSPHLVCIGALKKLCNHPCLLFKAIKEKECNSTHDGFE 514 Query: 60 EVIIEK------------------------------------ANAAPIIVAYHFNSDLAR 83 E + + + + +++ ++ L Sbjct: 515 ETNLYEGLIDVFPPDYSPVTFPEVDSGKLRVLIKLLAVIRELSPSEKVVLVSNYTQTLTI 574 Query: 84 LQKAFPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 LQ+ + + + I +N P + + G GG+ Sbjct: 575 LQEICKRYGYAHTRLDGQTPISQRQHIIDGFNSKHSPDFVFLLS-SKAGGVGLNLVGGSH 633 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + + R + G KR V +Y L+ TI+E + QR +K ++ Sbjct: 634 LILYDIDWNPAT-----DIQAMARVWRDGQKRPVHIYRLLTTGTIEEKIYQRQISKQSLS 688 Query: 192 DLLLNALKK-ETIH 204 +++ K E IH Sbjct: 689 GTVVDLTKASEHIH 702 >gi|317030518|ref|XP_001392709.2| SNF2 family helicase/ATPase PasG [Aspergillus niger CBS 513.88] Length = 892 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 76/221 (34%), Gaps = 28/221 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVH------DEKI 56 + +R L + I + ++ N Y+ + K+ Sbjct: 593 EEQERAKTIRLAKKEIAQKKMQNPIMQARLACNSPHNFYWPWMDDPTSIDETLVTASGKM 652 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT------------LDKDPCTIQ 102 L+ ++ I++ F + L LQ Q R+ D+ Sbjct: 653 LLLDRLVPCLLNKGHKILIFSQFKTQLDILQDWATQLRSWNCCRIDGAVSQEDRRAQIKA 712 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + L + G G+NL + ++ F W+ ++ + R + G Sbjct: 713 FNTDKNYKLFLLSTRAGGQGINLMA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQT 766 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V VY L + T+++ +L++ +K ++ L++ K ++ Sbjct: 767 KPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFRSL 807 >gi|281211743|gb|EFA85905.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1675 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 79/213 (37%), Gaps = 24/213 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYD---EEKHWKEVHDEKIKA 58 +Y + + ++ ++ + VK +++N + + K Sbjct: 931 EYGQLPMDPNSEIYKKSKTKMRGFNNVVKQLQKVSNHPYLFLTEWDINEDLIRASGKFDM 990 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN- 105 ++ I+ KA+ +++ + + + F ++ + EWN Sbjct: 991 MDQILIKMKASGHRVLIFTQMTEIINIMVEYFSIRDWGYLRLDGSTKPEERSRLVVEWNR 1050 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G G+NLQ + ++ F W+ + ++ R + G Sbjct: 1051 KDSPYFIFVLSTHAGGLGMNLQT-ADTVIIFDSDWNPQ-----MDLQAQDRCHRVGQVNR 1104 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ LI+ +TI+E +L+R K + ++ A Sbjct: 1105 VNVFRLISASTIEERILERATDKLDLDAKIIQA 1137 >gi|317032364|ref|XP_001394676.2| SNF2 family helicase/ATPase [Aspergillus niger CBS 513.88] Length = 1137 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 18/165 (10%) Query: 45 EKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ-----------GR 92 + K + KI+ L I+ +++ IV F S L +++ + R Sbjct: 896 DDDNKILPSTKIRRLMKILRRESSDHKFIVFSVFTSMLDKIEPFLKRTGIGYARYDGGMR 955 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + N +L + GLNL + +V +W+ +E Sbjct: 956 NDHREASLNKLRNNSGTRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FVEEQA 1009 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + V +Y +I + T++E ++ K + ++ + Sbjct: 1010 IDRVHRLNQTVDVKIYKMIIKGTVEERIIDLQDRKRELANVTIEG 1054 Score = 40.1 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 16/46 (34%), Gaps = 4/46 (8%) Query: 1 MKQYHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYY 42 M Y + ++ L+ GE ++ + ++ Q N Sbjct: 650 MNFYQRLEQRTENSLEKMMGGEKVDYAGALVLLLRLRQSCNHPDLV 695 >gi|73986612|ref|XP_867753.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 10 [Canis familiaris] Length = 1609 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 71/224 (31%), Gaps = 35/224 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYD---------EEKH 47 Y Q + G + + ++ ++ N + + Sbjct: 1009 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEVRPSTRDCGL 1068 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 K + L+ I+ K A +++ S + ++ F + Sbjct: 1069 DLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAE 1128 Query: 96 KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ +NE + + G GLNLQ + ++ F W+ + + Sbjct: 1129 DRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQ 1182 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 DRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1226 >gi|149209815|ref|XP_001522282.1| hypothetical protein MGCH7_ch7g389 [Magnaporthe oryzae 70-15] gi|86196344|gb|EAQ70982.1| hypothetical protein MGCH7_ch7g389 [Magnaporthe oryzae 70-15] Length = 2047 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 61/176 (34%), Gaps = 20/176 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-----------SDLARLQKAF 88 Y + + KI ++ + ++ F DL + Sbjct: 1855 YFDYLDDNWITSAKISKCTQLLSEIRQKGEKTLIFSVFTSLLDLLEVGIRHDLGLRVCRY 1914 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D +Q++ ++ + GLNL + ++ +W+ Sbjct: 1915 DGSLGRDARDKAVQDFQFNPNATIMLVSLRAGNAGLNLTA-ASQVIIMDPFWNP-----Y 1968 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 IE V R + G R+V V L+ + T+++ +++ K T+ + LN + + + Sbjct: 1969 IEMQAVDRAHRMGQLRSVHVQRLVVKETVEDRIIKLQEQKRTLVEAALNGDEAKNL 2024 >gi|302680218|ref|XP_003029791.1| hypothetical protein SCHCODRAFT_58508 [Schizophyllum commune H4-8] gi|300103481|gb|EFI94888.1| hypothetical protein SCHCODRAFT_58508 [Schizophyllum commune H4-8] Length = 835 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 22/166 (13%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPC 99 KI+ L ++ +++ F L + +D+ Sbjct: 503 DSGKIQTLLRLLEGYIGEKRKVLIFSQFTQVLDILVRVLQLKEITYRILTGSTPVDERQV 562 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + + G G+NL ++++ F ++ +R R + Sbjct: 563 LVDEFNENEDLSVFLLSTKAGGMGINLTA-ASVVILFDQDFNP-----HNDRQAQDRAYR 616 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL---LNALKKE 201 G R V V LI + TI+E +L+ +TK + + + ++ K E Sbjct: 617 IGQTRDVDVVKLITRGTIEEDMLRLAQTKLALDEAVAGDVDDEKGE 662 >gi|189191134|ref|XP_001931906.1| chromodomain-helicase-DNA-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973512|gb|EDU41011.1| chromodomain-helicase-DNA-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1735 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 72/209 (34%), Gaps = 31/209 (14%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----------HDEKIKALEVIIEKA 66 + E N ++ ++ + Y E + K+ LE+++ K Sbjct: 994 KQQERANLSNILMQLRKCLCHPFVYSREIEERSDVAAVSHRNLVEASAKLSLLEMLLPKL 1053 Query: 67 N--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL-- 112 + +++ F L ++ + + I ++N PL Sbjct: 1054 HERGHRVLIFSQFLDMLNIIEDFLDGMQLPYQRLDGTMGSLEKQKRIDQFNAPDSPLFAF 1113 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ W+ + + + R + G K V L Sbjct: 1114 LLSTRAGGVGINL-ATADTVIILDPDWNPHQ-----DLQAIARAHRIGQKNKVLCLQLAT 1167 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +++E ++Q + K + +++ L +E Sbjct: 1168 RASVEEKIMQMGKKKMALDKVVVQDLDRE 1196 >gi|168019895|ref|XP_001762479.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162686212|gb|EDQ72602.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1780 Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 11/168 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + LQ G + + + K + +I + V F + Sbjct: 1039 RLLQFDCGKLQ----ELAVLLRRLKSQGHRALIFTQMTKMLDVLESFINLYGYTYMRLDG 1094 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ +Q +N KI L S G G+NL G + ++F+ W+ ++ Sbjct: 1095 STKPEQRQVLMQRFNTNPKIFLFILSTRSGGVGINL-VGADTVIFYDSDWNPA-----MD 1148 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 1149 LQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRILDDLVIQS 1196 >gi|157134600|ref|XP_001663323.1| chromodomain helicase DNA binding protein [Aedes aegypti] gi|108870421|gb|EAT34646.1| chromodomain helicase DNA binding protein [Aedes aegypti] Length = 1983 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 70/226 (30%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFN---------SASKTVKCLQLANGAVYYD--------EEKHW 48 + Q++ Y + N EA N + + + N + Sbjct: 976 QMQKKYYKYILTRNFEALNPRGGGGACSLINIMMDLKKCCNHPYLFQAAVEEAPLGPGGS 1035 Query: 49 KEVHD-----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 E+ K+ LE ++++ +++ L L+ + Sbjct: 1036 YEIQSLTKAAGKLVLLEKMLKQLKEQGHRVLIFSQMTKMLDILEDFLEGFGYKYERIDGG 1095 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + G G+NL + ++ + W+ + Sbjct: 1096 ITGTLRQEAIDRFNAPGAQQFCFLLSTKAGGLGINL-ATADTVIIYDSDWNP-----HND 1149 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1150 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1195 >gi|62472261|ref|NP_001014591.1| Mi-2, isoform B [Drosophila melanogaster] gi|61678453|gb|AAX52739.1| Mi-2, isoform B [Drosophila melanogaster] Length = 1983 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 68/226 (30%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Q++ Y + +N EA NS + + + N + + Sbjct: 983 AMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGL 1042 Query: 57 KAL---------------EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 + + KA +++ L L+ + + Sbjct: 1043 YEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGG 1102 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + + G G+NL + ++ + W+ + Sbjct: 1103 ITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1156 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1157 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1202 >gi|195398205|ref|XP_002057713.1| GJ18281 [Drosophila virilis] gi|194141367|gb|EDW57786.1| GJ18281 [Drosophila virilis] Length = 1924 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 71/225 (31%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------EEKH 47 KQY+K + +G+ + ++ + N A E Sbjct: 795 KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELFGLQQDEALQ 854 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L + + Sbjct: 855 MLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFSFQRLDGSIKGE 914 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 915 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 968 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 969 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 1013 >gi|145245695|ref|XP_001395110.1| helicase swr1 [Aspergillus niger CBS 513.88] gi|134079817|emb|CAK40951.1| unnamed protein product [Aspergillus niger] Length = 1711 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 66/179 (36%), Gaps = 11/179 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + K + D K +I + + F + Sbjct: 1371 RLSIAFPDKRLLQYDCGKLQRLD----KLLRDLKAGGHRALIFTQMTKMLDILEQFLNIH 1426 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N I S G G+NL G + ++F+ L W+ Sbjct: 1427 GHRYLRLDGTTKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLT-GADTVIFYDLDWN 1485 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y +++ TI+ +L++ K + D+++ + Sbjct: 1486 PA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQEGE 1539 >gi|317031266|ref|XP_001393115.2| SWI/SNF family DNA-dependent ATPase Ris1 [Aspergillus niger CBS 513.88] Length = 1136 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 34/202 (16%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII----EKA 66 +L+ + N SK +L + KI+ I+ + Sbjct: 932 SLAELKKD--AQKNKKSKLKYLRRL-----------EKTWMSSAKIEKAMEILRDVYHRE 978 Query: 67 NAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I+ F S L ++ R D++ + + ++ Sbjct: 979 GNEKTIIFSQFTSLLDLLEIPIARQGWDYRRYDGSMRPADRNTSVMDFTDNEDCRIMLVS 1038 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + GLNL + ++ F +W+ +E V R + G R V ++ ++ ++T Sbjct: 1039 LKAGNAGLNLVA-ASQVIIFDPFWNP-----YVEEQAVDRAHRIGQVRPVQIHRIVVKDT 1092 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 +++ +L+ K + + L+ Sbjct: 1093 VEDRILELQDKKRELVEGALDE 1114 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 4/52 (7%), Positives = 11/52 (21%), Gaps = 5/52 (9%) Query: 4 YHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 Y+ + ++ G N ++ Q + Sbjct: 710 YNALEARSQNEVNRYLQQGVGRNYSNILVLLLRLRQACCHPHLIKDFTTEVN 761 >gi|312077956|ref|XP_003141528.1| CHromoDomain protein family member [Loa loa] gi|307763307|gb|EFO22541.1| CHromoDomain protein family member [Loa loa] Length = 1696 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 24/224 (10%), Positives = 62/224 (27%), Gaps = 34/224 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 735 KYYKNILTRNFEALSPKGGGSQISLINIIMDLKKCCNHPYLFPKASIEAPKLKNGIYEGT 794 Query: 48 WKEVHDEKI--KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K + K +++ L ++ + Sbjct: 795 ALVKASGKFVLLQKMLKKLKEQGHRVLIFSQMTKMLDIMEDFCENEGYKYERIDGSITGQ 854 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + + G G+NL + ++ + W+ + Sbjct: 855 ARQDAIDRFNAANAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 908 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G ++ V +Y + +N+++E + + K + L++ A Sbjct: 909 SRAHRIGQQKKVLIYRFVTRNSVEERITSVAKKKMLLTHLVVRA 952 >gi|323448278|gb|EGB04179.1| hypothetical protein AURANDRAFT_39128 [Aureococcus anophagefferens] Length = 711 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 66/217 (30%), Gaps = 27/217 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DE 54 + Y + L N + N A+ Sbjct: 243 RLYRAIYEKSASLLSSINCGIAGLNYVQMSLRNACNHALLVRGIDDALLSEPDSLVRGSG 302 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQ 102 K L ++ K+ +++ F L L + + + +I Sbjct: 303 KFVLLTKLLPRLKSEGRKVLIFSQFVRLLHLLAELCDTNGFMYERLDGTVKMAARQKSID 362 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N+ + + G GLNLQ + +V F W+ + + R + G Sbjct: 363 RFNDPCSDAFIFLLSTRAGGVGLNLQA-ADTVVIFDSDWNPQN-----DVQAQARCHRLG 416 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V VY L+A + + + +R K ++ +L + Sbjct: 417 QTKDVMVYRLVASRSFEGEMFERASRKLGLEKAVLGS 453 >gi|330916188|ref|XP_003297327.1| hypothetical protein PTT_07688 [Pyrenophora teres f. teres 0-1] gi|311330071|gb|EFQ94584.1| hypothetical protein PTT_07688 [Pyrenophora teres f. teres 0-1] Length = 1580 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGENIE-AFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 ++ Y Y L + + + ++ + +N A+ + ++ Sbjct: 695 LEYYKNILTRNYEALNEGGVGHKQSLLNIVMELKKASNHALLFPNAENKLVKPGSSKEET 754 Query: 53 -------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K A+ +++ L L + Sbjct: 755 LKALITSSGKMMLLDRLLGKLKADGHRVLIFSQMVHMLDILTDYLKLRNYSFQRLDGTVP 814 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I +N + G G+NL + +V F W+ + + Sbjct: 815 AADRKIAIDHFNAPGSEDYCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA-----DLQ 868 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G ++ V VY L++++TI+E +L+R R K + Sbjct: 869 AMARAHRIGQQKPVSVYRLVSKDTIEEEILERARNKRML 907 >gi|255541128|ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1| helicase, putative [Ricinus communis] Length = 860 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 77/224 (34%), Gaps = 30/224 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYY-------DEEKHWKEV 51 + Y R+ L + A N S ++ + + + EE Sbjct: 303 RVYMSILRKELPKLLALSSAASNHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQ 362 Query: 52 HDEKIKALEVIIEKANA--APIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPC 99 K+ L+ +++K + +I+ L + ++ Sbjct: 363 ASGKLIILDQLLKKLHGSGHRVIIFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERFA 422 Query: 100 TIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ + + + G GLNL + ++F+ W+ + +++ V R Sbjct: 423 AIRSFSGQAMNAFVFMISTRAGGVGLNLVA-ADTVIFYEQDWNPQ-----VDKQAVQRAH 476 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G V L+ ++T++E++++R K + + +L E Sbjct: 477 RIGQMNHVLSINLVTRHTVEEVIMRRAEKKLQLSNNVLGDDVME 520 >gi|198434196|ref|XP_002124510.1| PREDICTED: similar to helicase, lymphoid-specific [Ciona intestinalis] Length = 1444 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 67/195 (34%), Gaps = 29/195 (14%) Query: 28 KTVKCLQLANGAVYYD------------EEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 ++ + N +E + + + K +++ Sbjct: 1168 MIMQLRKCCNHPYLIQYPLQPGTDIFKVDEDLITSCGKMMLLDRMLPVLKERKHKVLLFS 1227 Query: 76 HFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 S L LQ + D+ + N+ + L + G G+N Sbjct: 1228 QMTSMLDVLQDYCVMRKFSFVRFDGSTKCEDRFAYIEEFNNDPNVFLFLLSTRAGGLGIN 1287 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + ++ + W+ + + R + G +R V VY ++ TID+ +++R Sbjct: 1288 LT-GADTVIIYDSDWNPQN-----DSQAQDRCHRIGQERPVMVYRMVTMATIDQQIMERA 1341 Query: 185 RTKSTIQDLLLNALK 199 K T++ ++++ K Sbjct: 1342 ARKRTMEKMIMHEDK 1356 >gi|148675185|gb|EDL07132.1| mCG19747 [Mus musculus] Length = 1723 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + Sbjct: 733 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKAPEDSERESGQEVLQS 792 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 793 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 852 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 853 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 906 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 907 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 950 >gi|307174075|gb|EFN64762.1| DNA repair and recombination protein RAD54-like [Camponotus floridanus] Length = 682 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 74/228 (32%), Gaps = 42/228 (18%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------------ 52 +R + D + ++ + +L N ++ K Sbjct: 367 ESIKRSMEEDDNPKKGGHLSALAAITLLKKLCNHPDLIYDKIMEKSEGFEKAAQLLPSHY 426 Query: 53 ---------DEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ---------- 90 K+ L+ ++ I++ ++ L +K + Sbjct: 427 STKQLLPELSGKLMVLDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCNKRSYNYVRLDG 486 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T+ K ++ +N + + G GLNL G N LV F W+ Sbjct: 487 SMTIKKRSKVVENFNSDTSSDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN----- 540 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ FVY ++ TI+E + QR K + +++ Sbjct: 541 DDQAMARVWRDGQKKTCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVD 588 >gi|189192520|ref|XP_001932599.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187974205|gb|EDU41704.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1002 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 31/224 (13%) Query: 1 MKQYHKFQRELYCDLQGE---NIEAFNSASKTVKCLQLANGAVYY--------DEEKHWK 49 ++ Y K + + G + ++ + N + Sbjct: 440 VQWYKKILEKDIDAVNGGAGNKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHL 499 Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKD 97 + K+ L+ ++ KA + +++ + + Sbjct: 500 VTNAAKMVMLDKLLKRMKAQGSRVLIFSQMSRVLDIMEDYSVMRGYQYCRIDGSTAHEDR 559 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N+ L + G G+NL +I+V F W+ + + + R Sbjct: 560 IQAIDDYNKEGSEKFLFLLTTRAGGLGINLTS-ADIVVLFDSDWNPQA-----DLQAMDR 613 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V+V+ + + I+E VL+R K + L++ + Sbjct: 614 AHRIGQTKQVYVFRFVTEMAIEEKVLERAAQKLRLDQLVIQQGR 657 >gi|322489686|emb|CBZ24946.1| putative DNA excision repair protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1280 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 65/218 (29%), Gaps = 56/218 (25%) Query: 28 KTVKCLQLANG-------------------------------------AVYYDEEKHWKE 50 + Q+ N + Sbjct: 822 LMNQLRQICNHADIYAVQQGADEEDRMMLGRRGAAAKLSAISATRPGQHRSFRSNNPVDL 881 Query: 51 VHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + K+ AL +++ K+ ++V L ++ Q Sbjct: 882 LGSGKLNALLMMLKEWKSFGHRVLVFSQTRMMLDIIENMCEQQAYSYIRMDGATNGHYRQ 941 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + I + G G+NL G + +V F W+ + + R Sbjct: 942 ELMDRFNEDDSIFVALLTTRVGGIGVNL-IGADRVVIFDPDWNP-----ITDVQARERAW 995 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V VY LI +++E +L+R K + D +L Sbjct: 996 RIGQKREVCVYRLITSGSVEESILRRQLAKMYVTDKVL 1033 >gi|242091593|ref|XP_002441629.1| hypothetical protein SORBIDRAFT_09g030646 [Sorghum bicolor] gi|241946914|gb|EES20059.1| hypothetical protein SORBIDRAFT_09g030646 [Sorghum bicolor] Length = 373 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 84/258 (32%), Gaps = 67/258 (25%) Query: 1 MKQYHKFQ----RELYCDL---QGENIEAF------NSASKTVKCLQLANGAVYYDEEKH 47 +K Y KF +E + A + L+L + E Sbjct: 41 LKLYDKFSSSNAKEEISTIVKANESEESAPQPKATRHVFQALQYLLKLCGHPLLATGESP 100 Query: 48 WKEV-------------------HDEKIKALEVIIEKAN---------------AAPIIV 73 + H K+ AL+ I+ + +++ Sbjct: 101 PNHLVDLLKEIGVGSGSELHELHHSPKLVALQEILHECGIGSEVSSPDASTAVGQHRVLI 160 Query: 74 AYHFNSDLARLQKAFPQGRT-------------LDKDPCTIQEWN-EGKIPLLFAHPASC 119 + L ++K Q +K ++ +N + I +L Sbjct: 161 FAQHKAFLDIIEKDLFQSHMRSVTYLRLDGSVDPEKRFEIVKAFNSDPTIDVLLLTTHVG 220 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + LVF W+ M + + R + G ++ V V+ LI + T++E Sbjct: 221 GLGLNLTS-ADTLVFMEHDWNP-----MKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEK 274 Query: 180 VLQRLRTKSTIQDLLLNA 197 V+ R K ++ + ++NA Sbjct: 275 VMSLQRFKVSVANAVINA 292 >gi|167383963|ref|XP_001736758.1| helicase [Entamoeba dispar SAW760] gi|165900796|gb|EDR27036.1| helicase, putative [Entamoeba dispar SAW760] Length = 954 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 77/217 (35%), Gaps = 27/217 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------EKHWKEVHDEKI 56 Y K + G+ + + + ++ + + K+ Sbjct: 350 YRKVLMGDVTVIIGDKVVKSKLNNTMTQLRKVCDHPYLMPGAEPEPYVNGEHLCLSSAKM 409 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDP-CTIQEW 104 +E ++EK N I++ L + + G+T +D I ++ Sbjct: 410 IVMEKLVEKHLKNNGKILIFSQMTRMLDIIDDYLVFKEIEHYRIDGQTQQEDRVEQINDF 469 Query: 105 NEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + S G G+NLQ + ++ + W+ + + + R + G Sbjct: 470 NDPNGKVSIFLLSTRSGGLGINLQS-ADTVILYDSDWNPQS-----DIQAMDRAHRIGQT 523 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V VY LI + T ++ +++ K + L++ + K Sbjct: 524 KPVTVYRLICEGTAEQRLIRVAERKLMLNRLVMQSGK 560 >gi|24667055|ref|NP_649154.2| Mi-2, isoform A [Drosophila melanogaster] gi|281366478|ref|NP_001163476.1| Mi-2, isoform C [Drosophila melanogaster] gi|13124018|sp|O97159|CHDM_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein Mi-2 homolog; AltName: Full=ATP-dependent helicase Mi-2; Short=dMi-2 gi|23093096|gb|AAF49099.2| Mi-2, isoform A [Drosophila melanogaster] gi|272455249|gb|ACZ94747.1| Mi-2, isoform C [Drosophila melanogaster] Length = 1982 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 68/226 (30%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS---------KTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Q++ Y + +N EA NS S + + N + + Sbjct: 982 AMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGL 1041 Query: 57 KAL---------------EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 + + KA +++ L L+ + + Sbjct: 1042 YEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGG 1101 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + + G G+NL + ++ + W+ + Sbjct: 1102 ITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1155 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1156 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1201 >gi|71022165|ref|XP_761313.1| hypothetical protein UM05166.1 [Ustilago maydis 521] gi|46097807|gb|EAK83040.1| hypothetical protein UM05166.1 [Ustilago maydis 521] Length = 1106 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + KI+AL+ +I + I++ F L L Sbjct: 914 MKSGKIQALQRLIPEIQAKGDRILIFSQFTMVLDILCVCLQHMGVKYVGFTGSTQVQDRQ 973 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ N+ I + + G G+NL N ++ F ++ ++ R Sbjct: 974 VLVDQFTNDASITVFLLSTKAGGLGINL-IAANWVILFDQDFNP-----HNDKQAADRSY 1027 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V L+++ TIDE + K + D + Sbjct: 1028 RMGQTKPVTVVKLLSRGTIDEDIHALGERKLQLADRV 1064 >gi|302405899|ref|XP_003000786.1| ATP-dependent helicase RIS1 [Verticillium albo-atrum VaMs.102] gi|261360743|gb|EEY23171.1| ATP-dependent helicase RIS1 [Verticillium albo-atrum VaMs.102] Length = 1103 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 64/184 (34%), Gaps = 30/184 (16%) Query: 49 KEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 + + KI+ + I+ + + I+ F S + ++ F + G D+ Sbjct: 856 QILASAKIRQMMQILHKEVHEHKFIIFSQFTSMMDLIEPFFRKDGLKFTRYDGGMKNDER 915 Query: 98 PCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE-------------- 142 ++ N+ K +L GLNL ++ +W+ Sbjct: 916 EASLDRLRNDKKTRILLCSLKCGSLGLNLTA-ATRVIIVEPFWNPVRAPSLCSRQNMAGE 974 Query: 143 --EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALK 199 Q +E + R + V VY LI + T+++ +L K + + +K Sbjct: 975 LLTEWQFVEEQAIDRVHRLTQTIDVIVYRLIVEATVEDRILALQEKKRLLAQTAIEGGMK 1034 Query: 200 KETI 203 K+ + Sbjct: 1035 KDVM 1038 Score = 39.0 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 14/43 (32%), Gaps = 2/43 (4%) Query: 2 KQYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY 42 + Y + + L+ N+ N+ ++ Q N Sbjct: 568 RFYDRLEARTDESLERMQGNMNYANALVLLLRLRQACNHPKLV 610 >gi|167517477|ref|XP_001743079.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778178|gb|EDQ91793.1| predicted protein [Monosiga brevicollis MX1] Length = 751 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 30/221 (13%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y Y +L+ + ++ N + ++ + N D+ + Sbjct: 408 QYYKTILTRNYTELRDIKKSKSSNLLNIVMELKKCCNHTNLIDDGLDNQGGPDPLTRLLR 467 Query: 53 -DEKIKALEVIIE--KANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPC 99 K+ L+ ++ K + +++ L + ++ Sbjct: 468 GSGKLILLDKLLTRLKESGHRVLIFSQMVVMLDVLAYYLALRQYQYQRLDGNTKHEQRKR 527 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + + R Sbjct: 528 AINHFNAEGSTDFAFLLSTRAGGLGVNL-ATADTVIIYDSDWNPQN-----DLQAQARAH 581 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G + V +Y L++++T++E +LQR + K + L++ + Sbjct: 582 RIGQTKQVNIYRLVSKSTVEEDILQRAKQKMVLDHLVIQRM 622 >gi|42567315|ref|NP_194918.2| chromatin remodeling factor, putative [Arabidopsis thaliana] Length = 1202 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 72/219 (32%), Gaps = 32/219 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------- 54 + Y Y L + + + +K Q+ + + + E +E Sbjct: 464 EVYKAVITNNYQVLTKKRDAKIS--NVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLE 521 Query: 55 -----KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPC 99 ++ ++ K +++ F L L+ F + + Sbjct: 522 ASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQV 581 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + G G+NL + ++ + W+ + + R Sbjct: 582 RIDRFNAENSNRFCFLLSTRAGGIGINL-ATADTVIIYDSDWNP-----HADLQAMARVH 635 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G V +Y LI + T++E +++ + K ++ L++ Sbjct: 636 RLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVG 674 >gi|45384232|ref|NP_990390.1| BRG1 protein [Gallus gallus] gi|996018|emb|CAA62831.1| BRG1 protein [Gallus gallus] Length = 1630 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1004 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1063 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1064 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1123 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1124 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1179 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1180 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1228 >gi|297736923|emb|CBI26124.3| unnamed protein product [Vitis vinifera] Length = 2266 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 72/223 (32%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYD----EEKHWKEVH---- 52 Y K + + G A + + ++ + N E + H Sbjct: 1303 AYQKLLMKRVEENLGSIGSTKARSVHNSVMELRNICNHPYLSQLHADEVDNLIPKHFLPP 1362 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ ++ K ++ L +++ + Sbjct: 1363 VVRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEEYLHWKQYRYLRLDGHTSGGD 1422 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I+++N+ P + + G G+NLQ + ++ F W+ + ++ Sbjct: 1423 RGALIEQFNQPDSPYFIFLLSIRAGGVGVNLQA-ADTVIIFDTDWNPQ-----VDLQAQA 1476 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V V L T++E V K + + + A Sbjct: 1477 RAHRIGQKRDVLVLRLETVQTVEEQVRASAEHKLGVANQSITA 1519 >gi|170117369|ref|XP_001889872.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164635212|gb|EDQ99523.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 672 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 73/203 (35%), Gaps = 27/203 (13%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---VHDEKIKALEVII- 63 +R DL E++ A Q+ + + E + K++ L ++ Sbjct: 436 KRGALFDLVKEDMSVMTDAEL-----QIFCASYKSTRKYLQDENCYLDAGKVQTLLKLLS 490 Query: 64 -EKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW-NEGKIPL 111 +++ F L +D + E+ + IP+ Sbjct: 491 TYDREGRKVLIFSQFTQILDILQAVLNNNKIKYLILTGSTPVDVRQTLVDEFTEDETIPV 550 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+NL +++V F ++ +R R + G KR V V LI Sbjct: 551 FLLSTKAGGMGINLTA-ASVVVMFDQDFNP-----HNDRQAQDRAYRIGQKRDVDVVKLI 604 Query: 172 AQNTIDELVLQRLRTKSTIQDLL 194 ++ TI+E +L+ +TK + + + Sbjct: 605 SRGTIEEDMLKLGQTKLALDEAV 627 >gi|4325130|gb|AAD17276.1| dMi-2 protein [Drosophila melanogaster] Length = 1982 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 68/226 (30%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS---------KTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Q++ Y + +N EA NS S + + N + + Sbjct: 982 AMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGL 1041 Query: 57 KAL---------------EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 + + KA +++ L L+ + + Sbjct: 1042 YEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGG 1101 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + + G G+NL + ++ + W+ + Sbjct: 1102 ITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1155 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1156 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1201 >gi|116214441|ref|XP_001230237.1| hypothetical protein CHGG_11061 [Chaetomium globosum CBS 148.51] gi|88175416|gb|EAQ82885.1| hypothetical protein CHGG_11061 [Chaetomium globosum CBS 148.51] Length = 2030 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 67/183 (36%), Gaps = 35/183 (19%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA 87 + LQ G K++ L+ ++ + ++ L L++ Sbjct: 1402 KRLLQYDCG----------------KLQTLDKLLRRLQAGGHRALIFTQMTKVLDILEQF 1445 Query: 88 FPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + +N + +I S G G+NL G + ++F+ Sbjct: 1446 LNIHGHKYLRLDGATKVEQRQILTDRFNHDPRILCFILSTRSGGLGINLT-GADTVIFYD 1504 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ +++ R + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1505 QDWNPA-----MDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKAGQKQMLDDVVIQ 1559 Query: 197 ALK 199 + Sbjct: 1560 EGE 1562 >gi|312220751|emb|CBY00692.1| hypothetical protein [Leptosphaeria maculans] Length = 1566 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 20/150 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCTIQEWN-E 106 + E + +V L +Q G K + ++N + Sbjct: 1331 DLPEAVSQHRALVFCQMKEMLDMVQHNVLEKLLPSVQFMRLDGGVEATKRQEIVNKFNSD 1390 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL G + ++F W+ ++ + + R + G K+ V Sbjct: 1391 PSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVN 1444 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY ++ + T++E +L R K + ++N Sbjct: 1445 VYRIVTRGTLEEKILNLQRFKIDVASTVVN 1474 >gi|316968996|gb|EFV53166.1| putative SNF2 family N- domain protein [Trichinella spiralis] Length = 1667 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 67/180 (37%), Gaps = 21/180 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 E E K+++L ++ +A ++ L L+ + Sbjct: 1253 RLCFPELRLIEYDCGKLQSLSALLRRLQAEGHRCLIFTQMARMLDILEAFLSYHGYMYLR 1312 Query: 96 --------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +N + KI S G G+NL G + ++F+ W+ Sbjct: 1313 LDGATNIERRQMLMERFNHDKKILCFILSTRSGGVGVNLT-GADTVIFYDSDWNPT---- 1367 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 ++ R + G R V +Y LI + TI+E +L + K + +L ++ K + H Sbjct: 1368 -MDAQAQDRCHRIGQTRDVHIYRLICERTIEENILLKATQKRKLGELAIDEGGFKADFFH 1426 Score = 35.5 bits (80), Expect = 4.5, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 16/49 (32%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV 51 Y +F Q FN S ++ ++ N +++ + Sbjct: 478 LYDEFMSRSNTKAQLATGSIFNIISVLMQLRKVCNHPNLFEQRPVMSPL 526 >gi|126322837|ref|XP_001362872.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform 1 [Monodelphis domestica] Length = 1644 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1006 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1065 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1066 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1125 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1126 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1181 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1182 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1230 >gi|302655807|ref|XP_003019687.1| hypothetical protein TRV_06277 [Trichophyton verrucosum HKI 0517] gi|291183425|gb|EFE39042.1| hypothetical protein TRV_06277 [Trichophyton verrucosum HKI 0517] Length = 629 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 18/177 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---- 90 ++NG E K W + + I + I++ ++ L ++ Sbjct: 366 VSNGRRGDREVKTWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYG 425 Query: 91 ------GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + K + ++N+ + + G G+NL G N LV F W+ Sbjct: 426 CIRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINL-VGANRLVLFDPDWNPA 484 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q + R + G + FVY IA TI+E + QR K ++ ++++ + Sbjct: 485 ADQ-----QALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAE 536 >gi|224126033|ref|XP_002319739.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222858115|gb|EEE95662.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2045 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 86/267 (32%), Gaps = 73/267 (27%) Query: 1 MKQYHK----FQRELYCDLQGENIEAF------------NSASKTVKCLQLANGAVYYDE 44 +K Y + R+ + + A + L+L + + Sbjct: 1707 LKLYEQFSGSLVRQEISSMVKLDDSAQPEGNSASPKASTHVFQALQYLLKLCSHPLLVAG 1766 Query: 45 EKHWKEV----------------------HDEKIKALEVIIEKAN--------------- 67 EK + + H K+ AL+ I+E+ Sbjct: 1767 EKMPESLVCRLHELLPPNCDILSELHKLHHSPKLVALQEILEECGIGVDASSSDNAVSVG 1826 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRT-------------LDKDPCTIQEWN-EGKIPLLF 113 +++ + L +++ + +K ++ +N + I L Sbjct: 1827 QHRVLIFAQHKALLDIIERDLFHSQMKNVTYLRLDGSVEPEKRFDIVKAFNSDPTIDALL 1886 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G GLNL + LVF W+ + + R + G K+ V V+ LI + Sbjct: 1887 LTTHVGGLGLNLTS-ADTLVFMEHDWNPMR-----DLQAMDRAHRLGQKKVVNVHRLIMR 1940 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKK 200 T++E V+ + K ++ + ++NA Sbjct: 1941 GTLEEKVMSLQKFKVSVANAVINAENA 1967 >gi|118781463|ref|XP_311484.3| AGAP010462-PA [Anopheles gambiae str. PEST] gi|116129961|gb|EAA07201.4| AGAP010462-PA [Anopheles gambiae str. PEST] Length = 1529 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1025 LYKHMQSKGVLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHIGVQ 1084 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1085 GTVTGPDLYRASGKFELLDRILPKLKATGHRVLLFCQMTQCMTIIEDYLSWRGFGYLRLD 1144 Query: 91 -GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ ++++N + G GLNLQ + +V F W+ + Sbjct: 1145 GTTKSEERGDLLKKFNSKNSDYFLFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1199 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1200 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1248 >gi|50557340|ref|XP_506078.1| YALI0F31053p [Yarrowia lipolytica] gi|49651948|emb|CAG78891.1| YALI0F31053p [Yarrowia lipolytica] Length = 1869 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 8/122 (6%) Query: 77 FNSDLARLQKAFPQGRTLDK-DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + + G T + +Q++N + I +L G GLNL G + ++F Sbjct: 1673 FKKYMPTVTFMRLDGSTEARHRHDIVQKFNADPSIDVLLLTTHVGGLGLNLT-GADTVIF 1731 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W+ M + + R + G K+ V VY LI +NT++E ++ + K I + Sbjct: 1732 VEHDWNP-----MNDLQAMDRAHRIGQKKVVNVYRLITRNTLEEKIMGLQKFKLNIASTV 1786 Query: 195 LN 196 +N Sbjct: 1787 IN 1788 >gi|268567385|ref|XP_002639966.1| Hypothetical protein CBG10790 [Caenorhabditis briggsae] Length = 1463 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 75/220 (34%), Gaps = 31/220 (14%) Query: 4 YHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKE----------VH 52 Y + Y +L + N ++ + N A + + + Sbjct: 663 YKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDYIYDDAQGRLQQLLKS 722 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K+ L+ ++ + +++ L LQ+ R + Sbjct: 723 SGKLILLDKLLCRLRDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQA 782 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + G G+NL + ++ F W+ + + ++R + Sbjct: 783 LDHYNAPGSTDFAFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAMSRAHR 836 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G + V +Y L+ + +++E +++R + K + L++ + Sbjct: 837 IGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRM 876 >gi|297694662|ref|XP_002824591.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like isoform 2 [Pongo abelii] Length = 2302 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 71/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L + N + ++ + N + + Sbjct: 780 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 839 Query: 52 ------------HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 840 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 899 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 900 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 956 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 957 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1009 >gi|293358941|ref|XP_232354.4| PREDICTED: chromodomain helicase DNA binding protein 4 [Rattus norvegicus] Length = 1967 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 984 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1043 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1044 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1103 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1104 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1157 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1158 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1199 >gi|258576789|ref|XP_002542576.1| helicase SWR1 [Uncinocarpus reesii 1704] gi|237902842|gb|EEP77243.1| helicase SWR1 [Uncinocarpus reesii 1704] Length = 1614 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 71/193 (36%), Gaps = 35/193 (18%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAY 75 E + A + LQ G K++ L+ ++ + ++ Sbjct: 1260 EAQTRLSIAFPDKRLLQYDCG----------------KLQQLDKLLRQLQAGGHRALIFT 1303 Query: 76 HFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 L L++ + + +N + +I + S G G+N Sbjct: 1304 QMTKMLDILEQFLNVHGHRYLRLDGSTKIEQRQMLTERFNNDPRILVFILSSRSGGLGIN 1363 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + ++F+ L W+ +++ R + G R V +Y L+++ TI+ +L++ Sbjct: 1364 LT-GADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRLVSEYTIESNILRKA 1417 Query: 185 RTKSTIQDLLLNA 197 K + D+++ Sbjct: 1418 NQKRMLDDVVIQE 1430 >gi|201066350|ref|NP_001128432.1| RAD54 like [Rattus norvegicus] gi|197246624|gb|AAI69034.1| Rad54l protein [Rattus norvegicus] Length = 748 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 83/233 (35%), Gaps = 43/233 (18%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y +F R+ + + E + +S S +L N ++ +E Sbjct: 422 ELYKRFLRQAKPEEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDGFEGTLGIF 481 Query: 53 -------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFP------- 89 K+ L+ I+ ++ +++ ++ L +K Sbjct: 482 PPGYNSKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYV 541 Query: 90 ---QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 542 RLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN- 599 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 600 ----DEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 648 >gi|149239498|ref|XP_001525625.1| DNA repair and recombination protein RAD54 [Lodderomyces elongisporus NRRL YB-4239] gi|146451118|gb|EDK45374.1| DNA repair and recombination protein RAD54 [Lodderomyces elongisporus NRRL YB-4239] Length = 875 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 70/222 (31%), Gaps = 49/222 (22%) Query: 26 ASKTVKCLQLANGAVYYD---------------------------EEKHWKEVHDEKIKA 58 +L N + + + K + Sbjct: 577 LKAIGMLKKLCNHPDLLNLPDDIEGCDDLIPEDYVSSIHGHGGGGRNREIQTWFSGKFQV 636 Query: 59 LEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 LE + K I++ ++ L ++K ++K + +N Sbjct: 637 LERFLHKIKRETNDKIVLISNYTQTLDLIEKMCRYKKYGALRLDGTMNINKRQKLVDRFN 696 Query: 106 EGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G G+NL G N LV W+ Q + R + G K+ Sbjct: 697 DPDGAEFIFLLSSKAGGCGINL-IGANRLVLIDPDWNPASDQ-----QALARVWRDGQKK 750 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 F+Y I+ TI+E + QR K ++ +++ K++ + Sbjct: 751 DCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDE-KEDVERL 791 >gi|123432105|ref|XP_001308354.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121890030|gb|EAX95424.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1612 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 61/206 (29%), Gaps = 40/206 (19%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEV---------------------HDEKIKALEVIIE-- 64 ++ ++ N + E K+ L+ ++ Sbjct: 509 LMMQLRKVCNHPYLIKGASEFIEKMIREKLSQASEDEIQLQALIESSGKMILLDKLLPKL 568 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLF 113 +++ L ++ + + I + N + Sbjct: 569 HQEGHKVLIFSQMVKVLDIIEDYLIKKDIDCERIDGNVPEPERNAAIDRFVNNENCYIFL 628 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ + W+ + + +R + G + V VY L+ + Sbjct: 629 LCTRAGGVGINLTA-ADTVIIYDSDWNPQN-----DIQAQSRCHRIGQTQKVKVYRLVTR 682 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 T + +L R K + LL+ + Sbjct: 683 GTYELEMLDRASKKLGLDHALLDGGE 708 >gi|322711493|gb|EFZ03066.1| SNF2 family helicase/ATPase, putative [Metarhizium anisopliae ARSEF 23] Length = 1025 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 66/173 (38%), Gaps = 19/173 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQKA 87 + + E+ K+ L +I + N ++V F+ + + Sbjct: 834 LKQFDISSAAELDSGKVTKLLELIRQYQENGDRVLVFSKFSRLIDLLQEVLALQGIDHRV 893 Query: 88 FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + I E+N IP+ + G G+NL N ++ F + ++ Sbjct: 894 LMGSTDVSERQVLIDEFNGNANIPVFLLTTGAGGTGINLTA-ANKVIIFDQSDNPQD--- 949 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G KR V V LIA TI+ELV + + K + + + AL+ Sbjct: 950 --DIQAENRAHRLGQKRDVEVVRLIASQTIEELVYKACQKKIELANKVTGALE 1000 >gi|309361198|emb|CAP30097.2| hypothetical protein CBG_10790 [Caenorhabditis briggsae AF16] Length = 1465 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 75/220 (34%), Gaps = 31/220 (14%) Query: 4 YHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKE----------VH 52 Y + Y +L + N ++ + N A + + + Sbjct: 665 YKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDYIYDDAQGRLQQLLKS 724 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K+ L+ ++ + +++ L LQ+ R + Sbjct: 725 SGKLILLDKLLCRLRDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQA 784 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + G G+NL + ++ F W+ + + ++R + Sbjct: 785 LDHYNAPGSTDFAFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAMSRAHR 838 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G + V +Y L+ + +++E +++R + K + L++ + Sbjct: 839 IGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRM 878 >gi|270014503|gb|EFA10951.1| hypothetical protein TcasGA2_TC004111 [Tribolium castaneum] Length = 1441 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 66/179 (36%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP 89 L + +K K+ L+ +++ K +++ + L++ Sbjct: 1066 LRPLKGWSYIAIPDKETLVTDSGKLSVLDGLLKRLKEEGHRVLIYSQMTKMIDLLEEYMW 1125 Query: 90 QGRTLD-----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + I + + G G+NL + ++F+ Sbjct: 1126 HRHHKYMRLDGSSKISERRDMVADFQARTDIFVFLLSTRAGGLGINLTA-ADTVIFYDSD 1184 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ +++ + R + G + V VY LI + +I+E +LQR R KS IQ L+++ Sbjct: 1185 WNPT-----VDQQAMDRAHRLGQTKQVTVYRLICKGSIEERILQRAREKSEIQKLVISG 1238 >gi|156097857|ref|XP_001614961.1| helicase [Plasmodium vivax SaI-1] gi|148803835|gb|EDL45234.1| helicase, putative [Plasmodium vivax] Length = 1795 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 61/162 (37%), Gaps = 19/162 (11%) Query: 43 DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 + K+ ALE ++ K ++ F L L+ Sbjct: 1388 FPLNKDITLGSGKLFALEKLLNKCKREGNKCLLFTQFIKMLDILEVFLNHLNYTFIRLDG 1447 Query: 91 GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +++ + ++N K I L + S G+NL N+++F+ W+ I+ Sbjct: 1448 STKVEQRQKIVTKFNNDKSIFLFISSTRSGSIGINLTA-ANVVIFYDTDWNPS-----ID 1501 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + + R + G + V V+ + + T++E + ++ K + Sbjct: 1502 KQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLD 1543 >gi|255731139|ref|XP_002550494.1| chromo domain protein 1 [Candida tropicalis MYA-3404] gi|240132451|gb|EER32009.1| chromo domain protein 1 [Candida tropicalis MYA-3404] Length = 1423 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 37/226 (16%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y L G + + + + +N +D + Sbjct: 602 EYYKNIITKNYAALNAGNKGSQISLLNVMSELKKASNHPYLFDGAEERVLEKAGSYSREN 661 Query: 51 ------VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GR 92 + K+ LE ++ K +++ L L Sbjct: 662 TLRGMIMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTI 721 Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + +I +N + G G+NL + ++ F W+ + + Sbjct: 722 PSSQRKISIDHFNAPDSKDFAFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DL 775 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 776 QAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIIS 821 >gi|171687365|ref|XP_001908623.1| hypothetical protein [Podospora anserina S mat+] gi|170943644|emb|CAP69296.1| unnamed protein product [Podospora anserina S mat+] Length = 1001 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 76/214 (35%), Gaps = 31/214 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----------- 53 + + L + ++ N T + L + + + +K + Sbjct: 757 EEMAKVLMKRIPQSELKQPNLGHLTNELKAL-SDFELHLWCRDYKCIRSFDLPDGSWGEC 815 Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTI 101 K+K+L +I + N +V F + L + + I Sbjct: 816 AKVKSLLKLIRGYQKNGDRALVFTRFAKVIEILGECLASEGVEYLSLQGNTDVSERQELI 875 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++N + IP+ S G G+NL N ++ F + ++ + R + G Sbjct: 876 NQFNADPTIPVFLLTTGSGGTGINLTA-ANKVIIFDQSDNPQD-----DIQAENRAHRLG 929 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R V + LI++ T++ELV + + K + + + Sbjct: 930 QTRPVEIVRLISEGTVEELVYKACQKKLELANKV 963 >gi|157877576|ref|XP_001687105.1| helicase [Leishmania major strain Friedlin] gi|68130180|emb|CAJ09491.1| putative helicase [Leishmania major strain Friedlin] Length = 1285 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 68/157 (43%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DPC 99 K++ LE + + + +++ F L L++ G + Sbjct: 867 DCGKLQFLETALKKMRDDGHRMLIFTQFVHMLNILERFLALIGVVYTRLDGSTKAELRQQ 926 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + +I + S G GLNL G + ++F+ W+ ++ R + Sbjct: 927 YVDRFNADPRITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPT-----MDLQAQDRCHR 980 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V +Y LI+++T++E +L++ R + + ++++ Sbjct: 981 IGQTRPVTIYRLISEHTVEESILEKARERKKLNNVVI 1017 >gi|301607806|ref|XP_002933489.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Xenopus (Silurana) tropicalis] Length = 1708 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 74/224 (33%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 634 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPEENEFYNRQEALQH 693 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + + Sbjct: 694 LIRSSGKLILLDKLLVRLRERGNRVLIFSQMVRMLDILAEYLKSRQFPFQRLDGSIKGEV 753 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 754 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 807 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +++R + K + L++ + Sbjct: 808 RAHRIGQKKQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRM 851 >gi|270009357|gb|EFA05805.1| hypothetical protein TcasGA2_TC030720 [Tribolium castaneum] Length = 729 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 72/219 (32%), Gaps = 43/219 (19%) Query: 15 LQGENIEA-FNSASKTVKCLQLANGAVYYDE---------------------EKHWKEVH 52 L ++A ++ + +L N + +K Sbjct: 398 LNDVEVKASLSALASITTLKKLCNHPDLIMDKILEGGEGFEKSRHLLPPNYNDKDVMPQL 457 Query: 53 DEKIK---ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 K+ ++ +++ ++ L +K + ++ K Sbjct: 458 SGKLMLLDCFLANLKNNYNDKVVLVSNYTQTLDLFEKLCRKRGYRYVRLDGTMSIKKRAK 517 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N+ + + + G GLNL G N L+ F W+ + + R Sbjct: 518 VVANFNDPESGEFIFMLSSKAGGCGLNL-IGANRLIMFDPDWNPAN-----DDQAMARVW 571 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ ++Y +A TI+E + QR K + +++ Sbjct: 572 RDGQQKPCYIYRFLAAGTIEEKIFQRQAHKKALSSTVVD 610 >gi|325089685|gb|EGC42995.1| chromodomain helicase [Ajellomyces capsulatus H88] Length = 1552 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--------------EE 45 ++ Y + Y L G + + + ++ + +N + E Sbjct: 717 LEYYKNILTKNYAALNQGGKGQKQSLLNIMMELKKASNHPFMFPNAESRILEGKTGREEM 776 Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 777 MRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDIRGYAYQRLDGTIA 836 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + + G G+NL + +V F W+ + + Sbjct: 837 AGPRRLSIEHFNAPESSDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 890 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E VL+R R K + Sbjct: 891 AMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLL 929 >gi|189458810|ref|NP_001074814.2| chromodomain helicase DNA binding protein 2 [Mus musculus] Length = 1827 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKAPEDSERESGQEVLQS 785 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 786 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 845 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 846 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 899 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 900 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 943 >gi|302420893|ref|XP_003008277.1| helicase SWR1 [Verticillium albo-atrum VaMs.102] gi|261353928|gb|EEY16356.1| helicase SWR1 [Verticillium albo-atrum VaMs.102] Length = 1183 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 66/171 (38%), Gaps = 11/171 (6%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 + LQ G + + K + + +I + + F + Sbjct: 954 KRLLQYDCGKLQALD----KLLRKLQAGGHRALIFTQMTKVLNILEQFLNIHGHKYLRLD 1009 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +++ +N + +I S G G+NL G + ++F+ W+ + Sbjct: 1010 GATKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLT-GADTVIFYDQDWNPA-----M 1063 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ R + G R V +Y L++++TI+ +L++ K + D+++ + Sbjct: 1064 DKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQEGE 1114 >gi|226293312|gb|EEH48732.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1234 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 59/171 (34%), Gaps = 26/171 (15%) Query: 53 DEKIKALEVIIEKANAA---------PIIVAYHFNSDLAR-----------LQKAFPQGR 92 KI+ I+ + I+ F S L ++ Sbjct: 1053 SAKIEKTMEILHDIQSRIPTGDDKPEKTIIFSQFTSLLDLLEVPILRKGWGYRRYDGSMN 1112 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ ++ + ++ + GLNL + ++ F +W+ IE Sbjct: 1113 PNQRNEAVMKFTDSKDCTIMLVSLKAGNAGLNLVA-ASQVIIFDPFWNP-----YIEEQA 1166 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R + G R V V+ ++ +NT+++ +L K + + L+ + I Sbjct: 1167 IDRAHRIGQVRPVVVHRILVKNTVEDRILDLQEKKRALIEGALDEGASQRI 1217 >gi|123959764|ref|NP_001074204.1| transcription termination factor 2 [Bos taurus] gi|115545427|gb|AAI22691.1| Transcription termination factor, RNA polymerase II [Bos taurus] Length = 1163 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 68/245 (27%), Gaps = 67/245 (27%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV--------------- 61 A + S+ ++ Q E+ E + Sbjct: 909 QATSSAVHILSQLLRLRQCCCHLSLLKSALDPTELKSEGLALSLEEQLSALTLSEFHNSE 968 Query: 62 ----------------------------IIEKAN-------AAPIIVAYHFNSDLA---- 82 ++ + + ++ + S L Sbjct: 969 PSASVSLNGKSFKVELFDDKRESTKISSLLAELEAVRRNSGSQKSVIVSQWTSMLKVVAL 1028 Query: 83 ------RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFF 135 + ++ +N + ++ + G GLNL GGN L Sbjct: 1029 HLKRCGFTYATIDGSVNPKQRMDLVEAFNSPRGPQVMLISLLAGGVGLNLT-GGNHLFLL 1087 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + W+ Q +RI + G ++ V ++ + + T++E +LQ K + +L Sbjct: 1088 DMHWNPSLEDQACDRI-----YRVGQQKDVVIHKFVCEETVEEKILQLQEKKKDLAKQIL 1142 Query: 196 NALKK 200 + ++ Sbjct: 1143 SGSEE 1147 >gi|149062633|gb|EDM13056.1| rCG47910, isoform CRA_a [Rattus norvegicus] Length = 1239 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 660 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 719 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 720 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 779 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 780 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 835 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 836 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 884 >gi|156717248|ref|NP_001096166.1| chromodomain helicase DNA binding protein 4 [Xenopus (Silurana) tropicalis] gi|126631946|gb|AAI33720.1| chd4 protein [Xenopus (Silurana) tropicalis] Length = 1888 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 66/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEKH 47 K Y + L + + + + N + + Sbjct: 974 KYYKFILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1033 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 K+ L+ ++ K + +++ L L+ G T + Sbjct: 1034 ALIKGAGKLLLLQKMLRKLKDDGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1093 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + +V + W+ + Sbjct: 1094 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVVIYDSDWNP-----HNDIQAF 1147 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1148 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1189 >gi|225683923|gb|EEH22207.1| DNA repair protein RAD5 [Paracoccidioides brasiliensis Pb03] Length = 1239 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 59/171 (34%), Gaps = 26/171 (15%) Query: 53 DEKIKALEVIIEKANAA---------PIIVAYHFNSDLAR-----------LQKAFPQGR 92 KI+ I+ + I+ F S L ++ Sbjct: 1058 SAKIEKTMEILHDIQSRIPTGDDKPEKTIIFSQFTSLLDLLEVPILRKGWGYRRYDGSMN 1117 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ ++ + ++ + GLNL + ++ F +W+ IE Sbjct: 1118 PNQRNEAVMKFTDSKDCTIMLVSLKAGNAGLNLVA-ASQVIIFDPFWNP-----YIEEQA 1171 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R + G R V V+ ++ +NT+++ +L K + + L+ + I Sbjct: 1172 IDRAHRIGQVRPVVVHRILVKNTVEDRILDLQEKKRALIEGALDEGASQRI 1222 >gi|225432366|ref|XP_002275787.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297736902|emb|CBI26103.3| unnamed protein product [Vitis vinifera] Length = 1080 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 79/223 (35%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q++ Y L +++E N+ + ++ + N + Sbjct: 442 QLQKQFYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLI 501 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ L Sbjct: 502 TNSGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRD 561 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I +N+ + + G G+NL ++++ + W+ + ++ R Sbjct: 562 ASIDAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 615 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 616 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGR 658 >gi|302695791|ref|XP_003037574.1| hypothetical protein SCHCODRAFT_65034 [Schizophyllum commune H4-8] gi|300111271|gb|EFJ02672.1| hypothetical protein SCHCODRAFT_65034 [Schizophyllum commune H4-8] Length = 1161 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 65/170 (38%), Gaps = 19/170 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------- 90 + + K+ L+ ++++ A+ +++ + L++ Sbjct: 898 FIHTPAANRLIYDSGKLSGLDTLLQQLKADGHRVLLYSQMTKLMDILEEYLIYRQYKYLR 957 Query: 91 ----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + + + G G+NL + +VF+ W+ Sbjct: 958 LDGSCKVETRRDLVNDWQTKPEYFVFLLSTKAGGVGINLTA-ADTVVFYDHDWNPSN--- 1013 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G R V VY LI +NT+DE VL+ R K +QD+++ Sbjct: 1014 --DAQAMDRAHRLGQTRQVTVYRLICRNTVDERVLKMARRKKDVQDVVVG 1061 >gi|212531233|ref|XP_002145773.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Penicillium marneffei ATCC 18224] gi|210071137|gb|EEA25226.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Penicillium marneffei ATCC 18224] Length = 1177 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 63/173 (36%), Gaps = 21/173 (12%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLAR-----------L 84 Y + K + KI+ I+E I+ F S L Sbjct: 990 RKYFKRLEKKWITSAKIEKAIEILEGIKESGKGEKTIIFSQFTSLLDMLEVPINRRGWKY 1049 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ +++ ++ ++ ++ + GLNL + ++ F +W+ Sbjct: 1050 RRYDGSMNPRERNESVLEFTDKPDCDIMLVSLKAGNAGLNLVA-ASQVIIFDPFWNP--- 1105 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 IE + R + G R V V+ ++ + T+++ +L+ K + + L+ Sbjct: 1106 --YIEEQAIDRAHRLGQTRPVQVHRILVEKTVEDRILELQDKKREVIEGALDE 1156 Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 3/49 (6%), Positives = 9/49 (18%), Gaps = 6/49 (12%) Query: 2 KQYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDE 44 + Y + + N ++ Q + Sbjct: 725 QLYDALESKTQIQFNKYLKANSVGKNYSNILVLLLRLRQACCHPHLIRD 773 >gi|296489466|gb|DAA31579.1| transcription termination factor, RNA polymerase II [Bos taurus] Length = 1163 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 68/245 (27%), Gaps = 67/245 (27%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV--------------- 61 A + S+ ++ Q E+ E + Sbjct: 909 QATSSAVHILSQLLRLRQCCCHLSLLKSALDPTELKSEGLALSLEEQLSALTLSEFHDSE 968 Query: 62 ----------------------------IIEKAN-------AAPIIVAYHFNSDLA---- 82 ++ + + ++ + S L Sbjct: 969 PSASVSLNGKSFKVELFDDKRESTKISSLLAELEAVRRNSGSQKSVIVSQWTSMLKVVAL 1028 Query: 83 ------RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFF 135 + ++ +N + ++ + G GLNL GGN L Sbjct: 1029 HLKRCGFTYATIDGSVNPKQRMDLVEAFNSPRGPQVMLISLLAGGVGLNLT-GGNHLFLL 1087 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + W+ Q +RI + G ++ V ++ + + T++E +LQ K + +L Sbjct: 1088 DMHWNPSLEDQACDRI-----YRVGQQKDVVIHKFVCEETVEEKILQLQEKKKDLAKQIL 1142 Query: 196 NALKK 200 + ++ Sbjct: 1143 SGSEE 1147 >gi|154280933|ref|XP_001541279.1| hypothetical protein HCAG_03376 [Ajellomyces capsulatus NAm1] gi|150411458|gb|EDN06846.1| hypothetical protein HCAG_03376 [Ajellomyces capsulatus NAm1] Length = 1552 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--------------EE 45 ++ Y + Y L G + + + ++ + +N + E Sbjct: 717 LEYYKNILTKNYAALNQGGKGQKQSLLNIMMELKKASNHPFMFPNAESRILEGKTGREEM 776 Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 777 MRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIA 836 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + + G G+NL + +V F W+ + + Sbjct: 837 AGPRRLSIEHFNAPESSDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 890 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E VL+R R K + Sbjct: 891 AMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLL 929 >gi|114651883|ref|XP_001153458.1| PREDICTED: chromodomain helicase DNA binding protein 8 isoform 2 [Pan troglodytes] Length = 2302 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 71/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L + N + ++ + N + + Sbjct: 780 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 839 Query: 52 ------------HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 840 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 899 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 900 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 956 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 957 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1009 >gi|79748111|ref|NP_001032178.1| helicase, lymphoid-specific [Danio rerio] gi|52001265|gb|AAU21503.1| PASG [Danio rerio] Length = 853 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 66/194 (34%), Gaps = 29/194 (14%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVIIEKAN--AAPIIVAYH 76 + + N A + K L+ ++ + +++ Sbjct: 580 LMLLKRCCNHAYLIEYPLDPTTGDFKIDEQLVEASGKFLILDRMLPELKKRGHKVLIFSQ 639 Query: 77 FNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 S L L D+D + ++ ++ L + G G+NL Sbjct: 640 MTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLSTRAGGLGINL 699 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ F W+ + + R + G + V V+ LI NTIDE +L+R Sbjct: 700 TS-ADTVIIFDSDWNPQA-----DLQAQDRCHRIGQTKPVVVHRLITANTIDEKILERAS 753 Query: 186 TKSTIQDLLLNALK 199 K ++ ++++ K Sbjct: 754 AKRKLEKMVIHKNK 767 >gi|328802689|ref|NP_001179063.1| chromodomain-helicase-DNA-binding protein 8 [Bos taurus] Length = 2303 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 71/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L + N + ++ + N + + Sbjct: 780 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 839 Query: 52 ------------HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 840 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 899 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 900 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 956 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 957 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1009 >gi|156037672|ref|XP_001586563.1| hypothetical protein SS1G_12550 [Sclerotinia sclerotiorum 1980] gi|154697958|gb|EDN97696.1| hypothetical protein SS1G_12550 [Sclerotinia sclerotiorum 1980 UF-70] Length = 938 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 65/194 (33%), Gaps = 24/194 (12%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV-----IIEKANAAPIIVAYHFNSD 80 ++ N ++ + + L I++K I+ ++ S Sbjct: 592 LQLITMLKKVCNAPSLLVKKSDTDTPSNSNVAQLLESIPPEILKKNIVVASILVSNYTST 651 Query: 81 LARLQKAF----------PQGRTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQY 127 L L K + +N K S G G+NL Sbjct: 652 LDLLMSHLSSLNLPFLRLDGSTPQAKRQDLVNTFNKTPASKYFAFLLSAKSGGAGINL-I 710 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + LV F + W+ + + R + G KR+V +Y + +DE + QR TK Sbjct: 711 GASRLVLFDVDWNPAT-----DLQAMARIHRDGQKRSVKIYRFLMSGGMDEKIYQRQVTK 765 Query: 188 STIQDLLLNALKKE 201 + D +++ K E Sbjct: 766 IGLADSVMDGKKNE 779 >gi|50310019|ref|XP_455023.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644158|emb|CAH00110.1| KLLA0E23717p [Kluyveromyces lactis] Length = 1873 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 78/253 (30%), Gaps = 64/253 (25%) Query: 2 KQYHKFQRELYCDLQG------ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----- 50 + Y+ F ++ ++ E + +L N H + Sbjct: 1549 QLYNDFVKKQKNVVEKDIENTAEVENKQHIFQALQYMRKLCNHPSLVLNSSHPQFQQVQS 1608 Query: 51 ------------VHDEKIKALEVIIEKA---------------------NAAPIIVAYHF 77 H K++AL+ ++ + + +++ Sbjct: 1609 YLSQTGMDLHDIGHAPKLEALKTLLLECGIGIQDVEKKSNKNPSIDNVISQHRVLIFCQL 1668 Query: 78 NSDLARLQ-------------KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGL 123 L ++ ++++N + I L G GL Sbjct: 1669 KDMLDMVENDLLKKHLPSVTFMRLDGSVDSRDRQKVVRKFNEDPSIDCLLLTTKVGGLGL 1728 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL G + ++F W+ M + + R + G K+ V VY +I + T++E ++ Sbjct: 1729 NLT-GADTVIFVEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRIITKGTLEEKIMGL 1782 Query: 184 LRTKSTIQDLLLN 196 + K I ++N Sbjct: 1783 QKFKMNIASTIVN 1795 >gi|326429323|gb|EGD74893.1| hypothetical protein PTSG_07121 [Salpingoeca sp. ATCC 50818] Length = 808 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 64/195 (32%), Gaps = 20/195 (10%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA- 68 + ++ + N ++ + N + + + + Sbjct: 540 QAVAEIN---VSMQNIL---MQLRKCCNHPYLLKYPLTPQVCTACVLCVCVCVCVRQAHP 593 Query: 69 --APIIVAYHFNSDLARLQKAFPQG-----RTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++ D L+ D+ + + + + + G Sbjct: 594 LMHTSLLFACPAQDYCWLRSFSACRLDGSVSFEDRKEEIRRFHEDDECFVFLLSTRAGGL 653 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL G + + + W+ + ++ R + G + V V+ LI NT+D+ +L Sbjct: 654 GLNL-VGADTCIIYDSDWNPQ-----VDLQAQDRCHRIGQSKTVLVFRLITANTVDQRIL 707 Query: 182 QRLRTKSTIQDLLLN 196 +R K ++ L+++ Sbjct: 708 ERAAGKRKLERLVIH 722 >gi|297297436|ref|XP_001096619.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Macaca mulatta] Length = 2301 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 71/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L + N + ++ + N + + Sbjct: 780 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 839 Query: 52 ------------HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 840 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 899 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 900 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 956 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 957 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1009 >gi|241157063|ref|XP_002407938.1| helicase, putative [Ixodes scapularis] gi|215494252|gb|EEC03893.1| helicase, putative [Ixodes scapularis] Length = 546 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 32/258 (12%), Positives = 70/258 (27%), Gaps = 70/258 (27%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAV---------- 40 + Y R + ++ + ++ Q + Sbjct: 276 RLYEDIDRWSRLTEPEKYVDPVSKKELYRNVGSRRFVALIRLQQACSHPALLKRRVLEDA 335 Query: 41 ------------------------------YYDEEKHWKEVHDEKIKALEVIIEK-ANAA 69 Y + + K+ L ++E+ Sbjct: 336 EVDCDDLLAACFSGLSLNKTADQGLDVLDKYSRCSEMERSFASCKLATLLQLLEEVPPKD 395 Query: 70 PIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWNEGK--IPLLFAHPA 117 +V + S LA +++ + + +N +L Sbjct: 396 KSVVLSKWTSLLALVEEHLGRRAIPCATIQGSVPGQRRAEIVHSFNRDPRGPKVLLLSLE 455 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL G N + + W+ +E R + G + V + LI T++ Sbjct: 456 AGGVGLNL-IGANHMFALDVHWNPA-----MEAQAFDRIHRVGQTKPVVINRLICAGTVE 509 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L+ K + D ++ Sbjct: 510 ERILELQAQKQRLADSVV 527 >gi|114326455|ref|NP_065971.2| chromodomain-helicase-DNA-binding protein 8 isoform 2 [Homo sapiens] gi|225356486|gb|AAI56440.1| Chromodomain helicase DNA binding protein 8 [synthetic construct] Length = 2302 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 71/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L + N + ++ + N + + Sbjct: 780 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 839 Query: 52 ------------HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 840 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 899 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 900 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 956 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 957 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1009 >gi|297599769|ref|NP_001047786.2| Os02g0689800 [Oryza sativa Japonica Group] gi|255671175|dbj|BAF09700.2| Os02g0689800 [Oryza sativa Japonica Group] Length = 1059 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 70/168 (41%), Gaps = 19/168 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------- 89 Y ++ + K++ L +++ K+ ++ L L++ Sbjct: 82 YFPDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLD 141 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ +Q +N K L S G G+NL G + ++F+ W+ + Sbjct: 142 GSTQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINL-VGADTVIFYDSDWNPA-----M 195 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ R + G R V +Y LI+++TI+E +L++ K + DL++ Sbjct: 196 DQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ 243 >gi|119473011|ref|XP_001258467.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Neosartorya fischeri NRRL 181] gi|119406619|gb|EAW16570.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Neosartorya fischeri NRRL 181] Length = 1276 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 34/208 (16%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA- 69 +L+ E + N SK +L V KI+ I+++ Sbjct: 1062 SLAELKKE--ASKNIKSKQKYLRRL-----------EKTWVTSAKIEKTLEILQEIQDRE 1108 Query: 70 ---PIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I+ F S L ++ R D++ ++ + ++ Sbjct: 1109 DSEKTIIFSQFTSLLDLLEVPIVRRGWGYRRYDGSMRPGDRNAAVLEFTDNPDCKIMLVS 1168 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + GLNL + ++ F +W+ IE + R + G R V ++ ++ Q T Sbjct: 1169 LKAGNAGLNLVA-ASQVIIFDPFWNP-----YIEDQAIDRAHRIGQMRQVHIHRILVQKT 1222 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETI 203 +++ +L+ K + D L+ ++ + Sbjct: 1223 VEDRILELQEKKREVIDGALDEKAQKKV 1250 Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 3/54 (5%), Positives = 8/54 (14%), Gaps = 6/54 (11%) Query: 3 QYHKFQRELYCDLQG------ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 Y + + N ++ Q + Sbjct: 832 IYDALESKTQVQFNKYLRANAIGRNYSNILVLLLRLRQACCHPHLMTDFSVEVN 885 >gi|73946649|ref|XP_860440.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 23 [Canis familiaris] Length = 1556 Score = 92.5 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDE----EKHWKEVH 52 Y Q + G + + ++ ++ N + + + Sbjct: 961 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEVNCSNTVFLF 1020 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1021 CLSGFRAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 1080 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1081 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1136 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1137 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1185 >gi|73986606|ref|XP_867722.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 7 [Canis familiaris] Length = 1598 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 69/216 (31%), Gaps = 28/216 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------HDEK 55 Y Q + + ++ ++ N + + K Sbjct: 1007 LYRHMQAKGLVGTGSFGGTK-TLMNTIMQLRKICNHPYMFQHIEDHDLSQRLDLYRASGK 1065 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + L+ I+ K A +++ S + ++ F + ++ Sbjct: 1066 FELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKT 1125 Query: 104 WNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +NE + + G GLNLQ + ++ F W+ + + R + G Sbjct: 1126 FNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQDRAHRIGQ 1179 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V L N+++E +L + K + ++ A Sbjct: 1180 QNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1215 >gi|240279419|gb|EER42924.1| chromodomain helicase hrp3 [Ajellomyces capsulatus H143] Length = 1540 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--------------EE 45 ++ Y + Y L G + + + ++ + +N + E Sbjct: 705 LEYYKNILTKNYAALNQGGKGQKQSLLNIMMELKKASNHPFMFPNAESRILEGKTGREEM 764 Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 765 MRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIA 824 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + + G G+NL + +V F W+ + + Sbjct: 825 AGPRRLSIEHFNAPESSDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 878 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E VL+R R K + Sbjct: 879 AMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLL 917 >gi|224052438|ref|XP_002197654.1| PREDICTED: helicase, lymphoid-specific [Taeniopygia guttata] Length = 824 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 74/221 (33%), Gaps = 32/221 (14%) Query: 2 KQYHKFQREL-YCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEE----------KHW 48 K + ++E ++ N + + + N + Sbjct: 519 KMQEEVEKERPVVEVSISMDSEVNLKLQNIMMLLRKCCNHPYLIEYPLDPATQQFKVDED 578 Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 + K L+ ++ + +++ L L + + Sbjct: 579 LVKNSGKFLLLDRMLPELKKRGHKVLLFSQMTMMLDILMDYCYLRNFKFSRLDGSMSYSE 638 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N + ++ L + G G+NL + ++ + W+ + + R Sbjct: 639 REENMHQFNTDPEVFLFLVSTRAGGLGINLTA-ADTVIIYDSDWNPQS-----DLQAQDR 692 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY L+ NTID+ +++R K ++ L+++ Sbjct: 693 CHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIH 733 >gi|91088413|ref|XP_966659.1| PREDICTED: similar to TATA-binding protein-associated factor 172 [Tribolium castaneum] gi|270011757|gb|EFA08205.1| hypothetical protein TcasGA2_TC005832 [Tribolium castaneum] Length = 1810 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 77/251 (30%), Gaps = 61/251 (24%) Query: 2 KQYHKFQRELYCDLQGENIEA----------FNSASKTVKCLQLANGAVYYDEEKHWKEV 51 + Y F + E+I + + + N H + Sbjct: 1499 RLYEDFSKSQAHQTLQESISSGATASSMQGNTHIFQALRYLQNVCNHPKLVLNASHPQYG 1558 Query: 52 -----------------HDEKIKALEVIIEKA--------------NAAPIIVAYHFNSD 80 H K+ AL+ +++ N +V + Sbjct: 1559 KILADLQTQDSKLDDISHSAKLPALKQLLQDCGIGVTEPQSTELVVNQHRALVFCQLKAM 1618 Query: 81 LARLQKAFPQGR-------------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 L ++K + + + +N + I +L G GLNL Sbjct: 1619 LDIIEKDLFKKHMPGVTYLRLDGSIPPSQRHSVVTRFNNDPSIDVLLLTTQVGGLGLNLT 1678 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F W+ M + + R + G ++ V VY LI + T++E ++ + Sbjct: 1679 -GADTVIFVEHDWNP-----MKDLQAMDRAHRIGQRKVVNVYRLITRATLEEKIMGLQKF 1732 Query: 187 KSTIQDLLLNA 197 K + +++ Sbjct: 1733 KVQTVNTIISG 1743 >gi|156230803|gb|AAI51850.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [synthetic construct] Length = 1647 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAWGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|73986604|ref|XP_867713.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 6 [Canis familiaris] Length = 1610 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 71/225 (31%), Gaps = 36/225 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + Sbjct: 1009 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEASLGPRGGHG 1068 Query: 53 ------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 K + L+ I+ K A +++ S + ++ F Sbjct: 1069 LDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKA 1128 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++ +NE + + G GLNLQ + ++ F W+ + + Sbjct: 1129 EDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQA 1182 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1227 >gi|303315865|ref|XP_003067937.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240107613|gb|EER25792.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1684 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 70/191 (36%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ + ++ Sbjct: 1340 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRQLQAGGHRALIFTQMTK 1383 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N + +I + S G G+NL G Sbjct: 1384 MLDILEQFLNVHGHRYLRLDGATKIEQRQMLTERFNNDPRILVFILSSRSGGLGINLT-G 1442 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1443 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1497 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1498 MLDDVVIQEGE 1508 >gi|225559675|gb|EEH07957.1| chromodomain helicase hrp3 [Ajellomyces capsulatus G186AR] Length = 1552 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--------------EE 45 ++ Y + Y L G + + + ++ + +N + E Sbjct: 717 LEYYKNILTKNYAALNQGGKGQKQSLLNIMMELKKASNHPFMFPNAESRILEGKTGREEM 776 Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 777 MRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIA 836 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + + G G+NL + +V F W+ + + Sbjct: 837 AGPRRLSIEHFNAPESSDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 890 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E VL+R R K + Sbjct: 891 AMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLL 929 >gi|260785484|ref|XP_002587791.1| hypothetical protein BRAFLDRAFT_92236 [Branchiostoma floridae] gi|229272944|gb|EEN43802.1| hypothetical protein BRAFLDRAFT_92236 [Branchiostoma floridae] Length = 206 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 26/201 (12%), Positives = 74/201 (36%), Gaps = 28/201 (13%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWKEVHDEKIKALEVIIE--KAN 67 + + ++ + AN + + K+ L+ ++ +A Sbjct: 11 GKSDKMRLLNILMQLRKCANHPYLFDGAEPGPPYTTDTHLVQNSGKMCILDKLLPRLQAE 70 Query: 68 AAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIP--LLFAH 115 + +++ L L+ ++ I ++N + Sbjct: 71 GSRVLIFSQMTRMLDILEDYCIWKGWQYCRLDGQTPHEERQAQINDYNRPGSDKFIFMLS 130 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL ++++ + W+ + ++ + R + G K+ V V+ +IA NT Sbjct: 131 TRAGGLGINL-ATADVVLLYDSDWNPQ-----VDLQAMDRAHRIGQKKQVRVFRMIADNT 184 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ +++R TK + +++ Sbjct: 185 VEDRIVERAETKLKLDTIVIQ 205 >gi|327283794|ref|XP_003226625.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2-like [Anolis carolinensis] Length = 1863 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 KQY+K R +G + ++ + N + + Sbjct: 759 KQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKSPEENERENNQEMLLS 818 Query: 52 ---HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 819 LIRSSGKLILLDKLLSRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 878 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 879 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 932 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 933 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 976 >gi|168050295|ref|XP_001777595.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162671080|gb|EDQ57638.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 775 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 73/214 (34%), Gaps = 34/214 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVH----- 52 K Y ++ C G+N N ++ ++ N E K H Sbjct: 483 KNYQLLRQVGGCKPGGQNQSLLNI---MMQLRKVCNHPYLLPGSEPEGGSPKFFHEMRIK 539 Query: 53 -DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKD 97 K+ L ++ +++ L L++ + + Sbjct: 540 ASAKLTLLHSMLRHLKRGGHRVLIFSQMTKLLDILEEYMVFEFGAHSYERVDGSVPVAER 599 Query: 98 PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I +N+ + + SCG G+NL + ++ + ++ + + R Sbjct: 600 QKSISRFNQDQSRFVFLLSTRSCGLGINL-ATADTVIIYDSDFNP-----HADIQAMNRA 653 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G + + VY L+ + +++E +LQ R K + Sbjct: 654 HRIGQSKTLLVYRLVVRASVEERILQLARKKLML 687 >gi|320032039|gb|EFW13995.1| helicase SWR1 [Coccidioides posadasii str. Silveira] Length = 1692 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 70/191 (36%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ + ++ Sbjct: 1348 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRQLQAGGHRALIFTQMTK 1391 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N + +I + S G G+NL G Sbjct: 1392 MLDILEQFLNVHGHRYLRLDGATKIEQRQMLTERFNNDPRILVFILSSRSGGLGINLT-G 1450 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1451 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1505 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1506 MLDDVVIQEGE 1516 >gi|296214427|ref|XP_002753817.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2 [Callithrix jacchus] Length = 2304 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 780 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 839 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 840 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 899 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 900 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 956 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 957 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1009 >gi|194207057|ref|XP_001918380.1| PREDICTED: chromodomain helicase DNA binding protein 8 [Equus caballus] Length = 2303 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 71/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L + N + ++ + N + + Sbjct: 780 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 839 Query: 52 ------------HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 840 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 899 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 900 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 956 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 957 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1009 >gi|51476360|emb|CAH18170.1| hypothetical protein [Homo sapiens] Length = 2302 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 71/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L + N + ++ + N + + Sbjct: 780 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 839 Query: 52 ------------HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 840 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 899 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 900 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 956 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 957 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1009 >gi|327351256|gb|EGE80113.1| transcriptional accessory protein [Ajellomyces dermatitidis ATCC 18188] Length = 1913 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 76/243 (31%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 K Q+++ + + EA + +L N +E H + Sbjct: 1591 KKEQKDIAKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKENHKRYDEIQKSLAGKNSH 1650 Query: 52 -----HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLAR---- 83 H K+ AL ++ + +V L Sbjct: 1651 IRDVAHAPKLTALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQMKEMLDIVQND 1710 Query: 84 ---------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 K + ++N + +L + G GLNL G + ++ Sbjct: 1711 VLKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVI 1769 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1770 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1824 Query: 194 LLN 196 ++N Sbjct: 1825 VVN 1827 >gi|189233685|ref|XP_970280.2| PREDICTED: similar to helicase [Tribolium castaneum] Length = 1427 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 66/179 (36%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP 89 L + +K K+ L+ +++ K +++ + L++ Sbjct: 1052 LRPLKGWSYIAIPDKETLVTDSGKLSVLDGLLKRLKEEGHRVLIYSQMTKMIDLLEEYMW 1111 Query: 90 QGRTLD-----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + I + + G G+NL + ++F+ Sbjct: 1112 HRHHKYMRLDGSSKISERRDMVADFQARTDIFVFLLSTRAGGLGINLTA-ADTVIFYDSD 1170 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ +++ + R + G + V VY LI + +I+E +LQR R KS IQ L+++ Sbjct: 1171 WNPT-----VDQQAMDRAHRLGQTKQVTVYRLICKGSIEERILQRAREKSEIQKLVISG 1224 >gi|73977356|ref|XP_532624.2| PREDICTED: similar to chromodomain helicase DNA binding protein 8 isoform 1 [Canis familiaris] Length = 2304 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKH----------WK 49 K Y + + L + N + ++ + N + + Sbjct: 780 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 839 Query: 50 EVHD----------EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 HD K+ ++ ++ K +++ L L+ Q R L + Sbjct: 840 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 899 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 900 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 956 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 957 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1009 >gi|237756840|ref|ZP_04585323.1| helicase SWR1 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691004|gb|EEP60129.1| helicase SWR1 [Sulfurihydrogenibium yellowstonense SS-5] Length = 383 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 81/221 (36%), Gaps = 34/221 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + + + + N K Q+ N + +H K + L+ Sbjct: 165 LNLYERIK----YEKNFNYMMKQNLIFSLQKLRQICNFP--------PESIHSPKAERLK 212 Query: 61 VIIEK--ANAAPIIVAYHFNSD------------LARLQKAFPQGRTLDKDP--CTIQEW 104 I+++ +++ +F ++ L Q G ++ + Sbjct: 213 EIVKELADQKEKVVIFTNFVNEGVDKIIKNLKTILQPQQIVSYHGSLKPEEKNLAVKKFV 272 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + K + + G GL L + ++FF L W+ + R + G K Sbjct: 273 EDEKCLVFVGTINAAGEGLTLTS-SSYVIFFDLHWNPAKMW-----QAEDRVHRIGQKNK 326 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V +Y I QNT++E +LQ+L K ++ + +++ + + V Sbjct: 327 VNIYTFITQNTVEEKILQKLEEKRSMINNVIDDVSSDIESV 367 >gi|170592228|ref|XP_001900871.1| CHD4 protein [Brugia malayi] gi|158591738|gb|EDP30342.1| CHD4 protein, putative [Brugia malayi] Length = 1846 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 24/224 (10%), Positives = 62/224 (27%), Gaps = 34/224 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + E Sbjct: 880 KYYKNILTRNFEALSPKGGGSQISLINIIMDLKKCCNHPYLFPKASIEAPKLKSGIYEGT 939 Query: 48 WKEVHDEKI--KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K + K +++ L ++ + Sbjct: 940 ALVKASGKFVLLQKMLKKLKEQGHRVLIFSQMTKMLDIMEDFCENEGYKYERIDGSITGQ 999 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + + G G+NL + ++ + W+ + Sbjct: 1000 ARQDAIDRFNAANAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1053 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G ++ V +Y + +N+++E + + K + L++ A Sbjct: 1054 SRAHRIGQQKKVLIYRFVTRNSVEERITSVAKKKMLLTHLVVRA 1097 >gi|149049417|gb|EDM01871.1| chromodomain helicase DNA binding protein 4, isoform CRA_a [Rattus norvegicus] Length = 1003 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 36 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 95 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 96 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 155 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 156 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 209 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 210 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 251 >gi|310801698|gb|EFQ36591.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1773 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 35/181 (19%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA 87 + LQ G K++AL+ ++ K ++ L L++ Sbjct: 1439 KRLLQYDCG----------------KLQALDKLLRKLQAGGHRALIFTQMTKVLDILEQF 1482 Query: 88 FPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + +N + +I S G G+NL G + ++F+ Sbjct: 1483 LNIHGHKYLRLDGATKIEQRQILTDRFNHDPRILCFILSTRSGGLGINLT-GADTVIFYD 1541 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ +++ R + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1542 QDWNPA-----MDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1596 Query: 197 A 197 Sbjct: 1597 E 1597 >gi|296813699|ref|XP_002847187.1| ATP-dependent helicase RIS1 [Arthroderma otae CBS 113480] gi|238842443|gb|EEQ32105.1| ATP-dependent helicase RIS1 [Arthroderma otae CBS 113480] Length = 1044 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 69/207 (33%), Gaps = 33/207 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y + E+ D +G EA S+++ KI+ L I Sbjct: 775 EYEEDATEIVTDEEGGEDEAD--LSESM-------------PSAIHDVQTSAKIRHLMRI 819 Query: 63 IEKANA-APIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIP 110 +++ + IV F S L +++ G ++ + N Sbjct: 820 LKRESGEFKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASLNRLRNSSGTR 879 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + GLNL + +V +W+ +E + R + V VY L Sbjct: 880 VLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEEQAIDRVHRLNQTVDVKVYKL 933 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 + T++E +L+ K + + Sbjct: 934 TIKGTVEERILELQERKRELAKSTIEG 960 Score = 39.0 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 14/43 (32%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + R L + G NI + ++ Q N Sbjct: 561 YQRLEQRADRSLERMIGGHNISYAGALVLLLRLRQACNHPDLV 603 >gi|149049421|gb|EDM01875.1| chromodomain helicase DNA binding protein 4, isoform CRA_d [Rattus norvegicus] Length = 659 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 36 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 95 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 96 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 155 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 156 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 209 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 210 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 251 >gi|194214970|ref|XP_001915028.1| PREDICTED: similar to DNA repair and recombination protein RAD54B (RAD54 homolog B) [Equus caballus] Length = 910 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 68/173 (39%), Gaps = 20/173 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + EE+ K K+ A+ + A +++ ++ L LQ+ + Sbjct: 633 PFMFTEEESGKLQVLSKLLAVIRELCPAE--KVVLVSNYTQTLNILQEVCKRHGYAYTRL 690 Query: 92 ---RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + +N + + G GLNL GG+ L+ + + W+ Sbjct: 691 DGQTPVSQRQQIVDSFNSKYSSDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPAT--- 746 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++R + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 747 --DIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQDLSGAVVDLTK 797 >gi|194751939|ref|XP_001958281.1| GF10842 [Drosophila ananassae] gi|190625563|gb|EDV41087.1| GF10842 [Drosophila ananassae] Length = 1971 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 74/226 (32%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS---------KTVKCLQLANGAVYYDEE--------KHW 48 Q++ Y + +N EA NS S + + N + Sbjct: 967 AMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEAPTSAGGL 1026 Query: 49 KEVHD-----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 E++ K+ L ++++ + +++ L L+ + + Sbjct: 1027 YEINSLTKAAGKLVLLSKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGG 1086 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + + G G+NL + ++ + W+ + Sbjct: 1087 ITGTVRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1140 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1141 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1186 >gi|68468949|ref|XP_721533.1| hypothetical protein CaO19.3035 [Candida albicans SC5314] gi|68469498|ref|XP_721262.1| hypothetical protein CaO19.10553 [Candida albicans SC5314] gi|46443171|gb|EAL02455.1| hypothetical protein CaO19.10553 [Candida albicans SC5314] gi|46443453|gb|EAL02735.1| hypothetical protein CaO19.3035 [Candida albicans SC5314] Length = 1410 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 72/226 (31%), Gaps = 37/226 (16%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y + Y L G + + + + +N +D + Sbjct: 605 EYYKNIITKNYAALNAGNRGSQISLLNIMSELKKASNHPYLFDGAEDKVLDKAGSPSREN 664 Query: 53 --------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GR 92 K+ LE ++ + +++ L L Sbjct: 665 TLKGIVMSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTV 724 Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 K I +N + G G+NL + ++ F W+ + + Sbjct: 725 PSSKRKIAIDHFNAPGSKDFAFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DL 778 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 779 QAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIIS 824 >gi|159154987|gb|AAI54480.1| Hells protein [Danio rerio] Length = 290 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 29/194 (14%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVIIEKAN--AAPIIVAYH 76 + + N A + K L+ ++ + +++ Sbjct: 17 LMLLKRCCNHAYLIEYPLDPTTGDFKIDEQLVEASGKFLILDRMLPELKKRGHKVLIFSQ 76 Query: 77 FNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 S L L D+D + ++ ++ L + G G+NL Sbjct: 77 MTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLSTRAGGLGINL 136 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ F W+ + + R + G + V VY LI NTIDE +L+R Sbjct: 137 TS-ADTVIIFDSDWNPQA-----DLQAQDRCHRIGQTKPVVVYRLITANTIDEKILERAS 190 Query: 186 TKSTIQDLLLNALK 199 K ++ ++++ K Sbjct: 191 AKRKLEKMVIHKNK 204 >gi|157819999|ref|NP_001100993.1| chromodomain-helicase-DNA-binding protein 2 [Rattus norvegicus] gi|149057183|gb|EDM08506.1| chromodomain helicase DNA binding protein 2 (predicted) [Rattus norvegicus] Length = 1834 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 KQY+K R +G + ++ + N + + Sbjct: 733 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIRAPEDSERETGQEVLQS 792 Query: 52 ---HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 793 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 852 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 853 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 906 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 907 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 950 >gi|114651885|ref|XP_001153391.1| PREDICTED: chromodomain helicase DNA binding protein 8 isoform 1 [Pan troglodytes] Length = 2198 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 71/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L + N + ++ + N + + Sbjct: 676 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 735 Query: 52 ------------HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 736 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 795 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 796 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 852 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 853 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 905 >gi|328352490|emb|CCA38889.1| chromodomain-helicase-DNA-binding protein 1 [Pichia pastoris CBS 7435] Length = 1387 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 75/224 (33%), Gaps = 37/224 (16%) Query: 4 YHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKE------------ 50 Y + Y L EA + + + + +N +D + Sbjct: 600 YKNILTKNYAALNAGPKEAQISLLNVMAELKKTSNHPYLFDGAEEQVLANLGSSSRENIF 659 Query: 51 ----VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ ++ K + +++ L L Sbjct: 660 RGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLTFKGYSFQRLDGTVPS 719 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I +N + + G G+NL + ++ F W+ + + Sbjct: 720 ARRRVAIDHFNADGSQDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQA 773 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E VL+R R K ++ +++ Sbjct: 774 MARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 817 >gi|307180236|gb|EFN68269.1| Helicase domino [Camponotus floridanus] Length = 2882 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 79/201 (39%), Gaps = 21/201 (10%) Query: 8 QRELYCDLQGE---NIEAFNSASKTV-------KCLQLANGAVYYDEEKHWKEVHDEKIK 57 +R L +LQ + + F+ S + + +Q G + + + K + Sbjct: 1633 ERHLQTELQRQLSPKVTVFHPISSLMLTQFPDPRLIQYDCGKLQSLDR----LLRKLKSE 1688 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHP 116 V+I + V F + + +D+ ++ +N + +I Sbjct: 1689 NHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTRVDQRQILMERFNGDKRIFCFILST 1748 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 S G G+NL G + ++F+ W+ ++ R + G R V +Y L+++ T+ Sbjct: 1749 RSGGVGVNLT-GADTVIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSEKTV 1802 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +L++ K + DL + Sbjct: 1803 EENILKKANQKRLLGDLAIEG 1823 >gi|290978132|ref|XP_002671790.1| predicted protein [Naegleria gruberi] gi|284085362|gb|EFC39046.1| predicted protein [Naegleria gruberi] Length = 1069 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 78/220 (35%), Gaps = 30/220 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------KHWKEVHD 53 + Y + ++G + ++ + N +D + Sbjct: 442 EWYRSILTKDLNSIKGGE--KVRLLNVVMQLRKCCNHPYLFDGAEPGPPYTLGDHLMNNS 499 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDK-DPCTI 101 K+ ++ +++K + +++ L + G+T + + Sbjct: 500 GKMYLVDKLLKKLKEQNSRVLIFTQMTRMLDILEDYCYLRNYEYCRIDGQTSSELREQHM 559 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 E+N+ + + G G+NL + ++ + W+ + + R + Sbjct: 560 DEFNKEGSSKFIFLLSTRAGGLGINL-ATADTVIIYDSDWNPQA-----DLQAQDRCHRI 613 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V VY LI++++I+E + QR K + +++ + Sbjct: 614 GQKKPVNVYRLISKDSIEEKIYQRAVKKLYLDAVVIQQGR 653 >gi|168702299|ref|ZP_02734576.1| helicase, Snf2 family protein [Gemmata obscuriglobus UQM 2246] Length = 763 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 26/207 (12%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK- 65 Q+ DL + I + V + + YD++ K+ ++ + Sbjct: 464 LQKNYLTDLDRKRI-----LASLVNLRTICDSLFLYDKQTRV----SPKLDEFAELVPEL 514 Query: 66 ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 + ++V + + G + ++ + +F Sbjct: 515 VSDHKLVVFSQWETMAMEAAKVLDRLGVGYVLLHGGLPGKERKAVLERFQADAACKVFLS 574 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNLQ + +V L W+ +Q I R+ + G R V V + + T Sbjct: 575 TDAGGTGLNLQ-MADTVVNLELPWNPAVLEQRIARV-----HRMGQNRPVRVINFVTRGT 628 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKET 202 I+E VL+ + +K + L E Sbjct: 629 IEERVLRTVESKQALFAGLFAGDADEI 655 >gi|292606963|gb|ADE34162.1| chromodomain helicase DNA-binding protein 4 [Schmidtea mediterranea] Length = 1868 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 65/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD---------EEKHWKEV 51 K Y + L + + + + N + ++ + Sbjct: 992 KFYKYILTRNFDALSVKGGGSQISLINIVMDLKKCCNHPYLFPSGSDEAPKLRNGAYEGL 1051 Query: 52 HDEKIKALEVIIEKA------NAAPIIVAYHFNSDLARLQKAFPQG----------RTLD 95 K ++ K +++ L L+ T Sbjct: 1052 ALIKASGKLELLYKMLPKLKTGGHRVLIFSQMTRLLDILEDFMDYMGYKFERIDGAVTGQ 1111 Query: 96 KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +I +N + + G G+NL + ++ + W+ + Sbjct: 1112 QRQDSIDRFNAPDSVSFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1165 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +NT++E V Q + K + L++ Sbjct: 1166 SRAHRIGQSNKVMIYRFVTRNTVEERVTQVAKKKMMLTHLVV 1207 >gi|115441433|ref|NP_001044996.1| Os01g0881000 [Oryza sativa Japonica Group] gi|56784632|dbj|BAD81679.1| putative chromatin remodeling factor CHD3 [Oryza sativa Japonica Group] gi|113534527|dbj|BAF06910.1| Os01g0881000 [Oryza sativa Japonica Group] Length = 1150 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 89/224 (39%), Gaps = 37/224 (16%) Query: 8 QRELYCDLQGENIEAFNSASK----------TVKCLQLANGAVYYDEEKHWKEV------ 51 QRELY ++ N NSA + ++ + N V + + E Sbjct: 781 QRELYINILERNYSKLNSAIRNGRKLSLNNILMELRKCCNHPVGLEVGQQATEDVFLSLI 840 Query: 52 -HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-GRTLDK---------DP 98 K++ L ++ K +++ L L+ G + Sbjct: 841 ASSGKLQLLHKLLPRLKERGNRVLIFSQMTRMLDILEDFLCSLGYKYARIDGQTSLSARQ 900 Query: 99 CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+E+ + + + + G G++L G + ++ + ++ ++ +R Sbjct: 901 ESIEEYKNIDSETFIFLMSTRAGGMGVDL-PGADRVIIYDPDFNP-----FMDLQAQSRA 954 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V VY LI + +++E +LQ+ + K I+++L+N+ KK Sbjct: 955 HRIGQTRPVVVYQLITKCSVEEKILQKSKQKLAIENMLMNSSKK 998 >gi|73997426|ref|XP_867844.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 15 [Canis familiaris] Length = 1963 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 977 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1036 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1037 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1096 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1097 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1150 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1151 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1192 >gi|168057891|ref|XP_001780945.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp. patens] gi|162667579|gb|EDQ54205.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp. patens] Length = 1677 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 27/229 (11%), Positives = 67/229 (29%), Gaps = 42/229 (18%) Query: 4 YHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 Y L +I + + ++ +L N D + Sbjct: 792 YRAIYENNISTLLKGSIATNMPSLRNVAMELRKLCNHPFLCDGLEESIVFKHRSLNDGNA 851 Query: 53 -----------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-- 97 K+ ++ ++ K +++ F L L+ + Sbjct: 852 SNLAETLLSQSSGKMVLVDKLLPKLKEAGRRVLIFSQFTMMLDLLEDYLLSKGYSYERID 911 Query: 98 --------PCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I + + I + + G G+ L + + + W+ + Sbjct: 912 GKIRGSDRQAAIDRYSAKDSSIFVFLLSTRAGGLGITLTA-ADTCIIYDSDWNPQN---- 966 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G + V +Y LI +NT ++ + + K + + +L Sbjct: 967 -DLQAMARCHRIGQTKDVKIYRLITRNTYEQRLFECSSRKYGLDEAILG 1014 >gi|157822353|ref|NP_001099841.1| helicase, lymphoid specific [Rattus norvegicus] gi|149062802|gb|EDM13225.1| rCG47275 [Rattus norvegicus] Length = 837 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKANA--APIIVAYH 76 + + N + + K L+ ++ + ++V Sbjct: 563 MMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRCHKVLVFSQ 622 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + I +N + ++ L + G G+NL Sbjct: 623 MTSMLDILMDYCHLRNFTFSRLDGSMSYSEREKNIYSFNTDPEVFLFLVSTRAGGLGINL 682 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 683 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 736 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 737 AKRKLEKLIIH 747 >gi|296204004|ref|XP_002806940.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2-like [Callithrix jacchus] Length = 1738 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 711 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLS 770 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ + +++ L L + + Sbjct: 771 LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 830 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 831 RKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 884 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 885 RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 928 >gi|73986622|ref|XP_867793.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 15 [Canis familiaris] Length = 1618 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1011 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1070 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1071 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1130 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1131 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1186 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1187 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1235 >gi|238879188|gb|EEQ42826.1| chromo domain protein 1 [Candida albicans WO-1] Length = 1410 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 72/226 (31%), Gaps = 37/226 (16%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y + Y L G + + + + +N +D + Sbjct: 605 EYYKNIITKNYAALNAGNRGSQISLLNIMSELKKASNHPYLFDGAEDKVLDKAGSSSREN 664 Query: 53 --------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GR 92 K+ LE ++ + +++ L L Sbjct: 665 TLKGIVMSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTV 724 Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 K I +N + G G+NL + ++ F W+ + + Sbjct: 725 PSSKRKIAIDHFNAPGSKDFAFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DL 778 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 779 QAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIIS 824 >gi|254567734|ref|XP_002490977.1| Nucleosome remodeling factor that functions in regulation of transcription elongation [Pichia pastoris GS115] gi|238030774|emb|CAY68697.1| Nucleosome remodeling factor that functions in regulation of transcription elongation [Pichia pastoris GS115] Length = 1387 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 75/224 (33%), Gaps = 37/224 (16%) Query: 4 YHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKE------------ 50 Y + Y L EA + + + + +N +D + Sbjct: 600 YKNILTKNYAALNAGPKEAQISLLNVMAELKKTSNHPYLFDGAEEQVLANLGSSSRENIF 659 Query: 51 ----VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ L+ ++ K + +++ L L Sbjct: 660 RGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLTFKGYSFQRLDGTVPS 719 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I +N + + G G+NL + ++ F W+ + + Sbjct: 720 ARRRVAIDHFNADGSQDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQA 773 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E VL+R R K ++ +++ Sbjct: 774 MARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 817 >gi|149020473|gb|EDL78278.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_b [Rattus norvegicus] Length = 1614 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|5917757|gb|AAD56025.1|AF181828_1 chromodomain helicase DNA binding protein 1 [Nymphicus hollandicus] Length = 918 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + Sbjct: 345 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQH 404 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 405 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 464 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 465 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 518 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 519 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 562 >gi|302893793|ref|XP_003045777.1| hypothetical protein NECHADRAFT_34187 [Nectria haematococca mpVI 77-13-4] gi|256726704|gb|EEU40064.1| hypothetical protein NECHADRAFT_34187 [Nectria haematococca mpVI 77-13-4] Length = 1722 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 35/183 (19%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA 87 + LQ G K++ L+ ++ K ++ L L++ Sbjct: 1394 KRLLQYDCG----------------KLQILDKLLRKLQAGGHRALIFTQMTKVLDILEQF 1437 Query: 88 FPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + +N + +I S G G+NL G + ++F+ Sbjct: 1438 LNIHGHKYLRLDGATKVEQRQILTDRFNHDPRILCFILSTRSGGLGINLT-GADTVIFYD 1496 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ +++ R + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1497 QDWNPA-----MDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1551 Query: 197 ALK 199 + Sbjct: 1552 EGE 1554 >gi|209954670|ref|NP_599195.1| transcription activator BRG1 [Rattus norvegicus] Length = 1613 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|76253779|ref|NP_035547.2| transcription activator BRG1 isoform 2 [Mus musculus] gi|50927531|gb|AAH79560.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Mus musculus] gi|74181104|dbj|BAE27821.1| unnamed protein product [Mus musculus] gi|148693262|gb|EDL25209.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_b [Mus musculus] Length = 1614 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|26353994|dbj|BAC40627.1| unnamed protein product [Mus musculus] Length = 747 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 84/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F R+ +L+ + + +S T +L N ++ +E Sbjct: 422 ELYKRFLRQAKPEEELREGKMSVSSLSSITS-LKKLCNHPALIYDKCVAEEDGFEGTLGI 480 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ ++ ++ +++ ++ L +K Sbjct: 481 FPPGYNSKAVEPQLSGKMLVLDYVLAVTRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYLY 540 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 541 VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 599 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 600 -----DEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 648 >gi|322694613|gb|EFY86438.1| SNF2 family helicase/ATPase, putative [Metarhizium acridum CQMa 102] Length = 1027 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 69/178 (38%), Gaps = 19/178 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK- 96 + + E+ K+ L +I + N ++V ++ + LQ+ + Sbjct: 834 LKQFDIPSAAELDSGKVTKLLELIRQYQENGDRVLVFSKYSRLIELLQEVLALQGVDHRV 893 Query: 97 ---------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I E+N + IP+ + G G+NL N ++ F L + ++ Sbjct: 894 LMGNTNVSERQTLIDEFNEDASIPVFLLTTGAGGTGINLTA-ANKVIIFDLSDNPQD--- 949 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + R + G KR V V LIA +I+EL+ + + K + + + A E H Sbjct: 950 --DIQAENRAHRLGQKRDVEVIRLIASQSIEELIYKACQKKIELANKVTGAGALEDTH 1005 >gi|301771980|ref|XP_002921404.1| PREDICTED: transcription activator BRG1-like isoform 2 [Ailuropoda melanoleuca] Length = 1606 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|298715164|emb|CBJ34003.1| conserved unknown protein [Ectocarpus siliculosus] Length = 573 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 21/177 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQGR-- 92 + K K++AL ++E+ AA IV F + L ++ +G+ Sbjct: 387 HSVINRIDLNKFQSSTKMEALMEEVHLMMERDPAAKAIVFSQFVNMLDLIEFRMHKGQVG 446 Query: 93 --------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++DK +Q + + + +L + G LNL N + WW+ Sbjct: 447 CRKLSGHLSVDKREEVLQAFQTDPGVKVLLISLKAGGVALNLT-VANHIFLMDPWWNPAA 505 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q I+R + G + ++ I ++T++E +++ K + D + Sbjct: 506 EMQAIDR-----THRLGQFKPIYATRFIIEDTVEERIIKLQEKKQLVFDSTVGGDAA 557 >gi|145610193|ref|XP_001410153.1| hypothetical protein MGG_12631 [Magnaporthe oryzae 70-15] gi|145017551|gb|EDK01914.1| hypothetical protein MGG_12631 [Magnaporthe oryzae 70-15] Length = 1334 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 61/176 (34%), Gaps = 20/176 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN-----------SDLARLQKAF 88 Y + + KI ++ + ++ F DL + Sbjct: 1142 YFDYLDDNWITSAKISKCTQLLSEIRQKGEKTLIFSVFTSLLDLLEVGIRHDLGLRVCRY 1201 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D +Q++ ++ + GLNL + ++ +W+ Sbjct: 1202 DGSLGRDARDKAVQDFQFNPNATIMLVSLRAGNAGLNLTA-ASQVIIMDPFWNP-----Y 1255 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 IE V R + G R+V V L+ + T+++ +++ K T+ + LN + + + Sbjct: 1256 IEMQAVDRAHRMGQLRSVHVQRLVVKETVEDRIIKLQEQKRTLVEAALNGDEAKNL 1311 >gi|73986618|ref|XP_867778.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 13 [Canis familiaris] Length = 1608 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1001 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1060 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1061 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1120 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1121 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1176 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1177 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1225 >gi|261197521|ref|XP_002625163.1| TBP associated factor [Ajellomyces dermatitidis SLH14081] gi|239595793|gb|EEQ78374.1| TBP associated factor [Ajellomyces dermatitidis SLH14081] gi|239606789|gb|EEQ83776.1| TBP associated factor [Ajellomyces dermatitidis ER-3] Length = 1902 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 76/243 (31%), Gaps = 57/243 (23%) Query: 5 HKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEV------------ 51 K Q+++ + + EA + +L N +E H + Sbjct: 1580 KKEQKDIAKIVGSTDKEAKQHIFQALQYMRRLCNSPALVVKENHKRYDEIQKSLAGKNSH 1639 Query: 52 -----HDEKIKALEVIIEKA-------------------NAAPIIVAYHFNSDLAR---- 83 H K+ AL ++ + +V L Sbjct: 1640 IRDVAHAPKLTALRDLLVDCGIGVDPSTEGELDTGASYVSPHRALVFCQMKEMLDIVQND 1699 Query: 84 ---------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 K + ++N + +L + G GLNL G + ++ Sbjct: 1700 VLKKLLPSVQYLRLDGSVEATKRQNIVNQFNTDPSYDVLLLTTSVGGLGLNLT-GADTVI 1758 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ ++ + + R + G K+ V VY LI + T++E +L R K + Sbjct: 1759 FVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRGTLEEKILNLQRFKIDVAST 1813 Query: 194 LLN 196 ++N Sbjct: 1814 VVN 1816 >gi|202029075|gb|ACH95308.1| LP03212p [Drosophila melanogaster] Length = 2642 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 67/179 (37%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 + + + + K++ ++ ++ + N +++ L L+ Sbjct: 1095 LHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLN 1154 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ +N + +I S G G+NL G + ++F+ Sbjct: 1155 YHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSD 1213 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 1214 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 1267 >gi|192807318|ref|NP_001122319.1| transcription activator BRG1 isoform E [Homo sapiens] gi|119604573|gb|EAW84167.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform CRA_f [Homo sapiens] gi|167888968|gb|ACA09753.1| SMARCA4 isoform 1 [Homo sapiens] Length = 1614 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|291463269|ref|NP_001167549.1| transcription activator BRG1 isoform 1 [Mus musculus] gi|74144347|dbj|BAE36034.1| unnamed protein product [Mus musculus] Length = 1617 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|81914599|sp|Q8K1P7|SMCA4_RAT RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 gi|22095171|emb|CAD43278.1| brahma-related protein 1 [Rattus norvegicus] Length = 1613 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|225441914|ref|XP_002278785.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1563 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 21/199 (10%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--AN 67 L ++ E + + T K + + K++ L++++++ A Sbjct: 1171 HLIQEIDSELPVSKPALQLTYKI--FGSSPPMQSFDPAKLLTDSGKLQTLDILLKRLRAE 1228 Query: 68 AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHP 116 +++ L L+ T+ ++++ I + Sbjct: 1229 NHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRSDIFVFLLST 1288 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++F+ W+ + + R + G + V VY LI + T+ Sbjct: 1289 RAGGLGINLTA-ADTVIFYESDWNPTL-----DLQAMDRAHRLGQTKDVTVYRLICKETV 1342 Query: 177 DELVLQRLRTKSTIQDLLL 195 +E +LQR KST+Q L++ Sbjct: 1343 EEKILQRASQKSTVQQLVM 1361 >gi|189238349|ref|XP_967988.2| PREDICTED: similar to steroid receptor-interacting snf2 domain protein [Tribolium castaneum] Length = 713 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 72/219 (32%), Gaps = 43/219 (19%) Query: 15 LQGENIEA-FNSASKTVKCLQLANGAVYYDE---------------------EKHWKEVH 52 L ++A ++ + +L N + +K Sbjct: 382 LNDVEVKASLSALASITTLKKLCNHPDLIMDKILEGGEGFEKSRHLLPPNYNDKDVMPQL 441 Query: 53 DEKIK---ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 K+ ++ +++ ++ L +K + ++ K Sbjct: 442 SGKLMLLDCFLANLKNNYNDKVVLVSNYTQTLDLFEKLCRKRGYRYVRLDGTMSIKKRAK 501 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N+ + + + G GLNL G N L+ F W+ + + R Sbjct: 502 VVANFNDPESGEFIFMLSSKAGGCGLNL-IGANRLIMFDPDWNPAN-----DDQAMARVW 555 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ ++Y +A TI+E + QR K + +++ Sbjct: 556 RDGQQKPCYIYRFLAAGTIEEKIFQRQAHKKALSSTVVD 594 >gi|302841324|ref|XP_002952207.1| hypothetical protein VOLCADRAFT_81789 [Volvox carteri f. nagariensis] gi|300262472|gb|EFJ46678.1| hypothetical protein VOLCADRAFT_81789 [Volvox carteri f. nagariensis] Length = 755 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 20/191 (10%), Positives = 63/191 (32%), Gaps = 29/191 (15%) Query: 28 KTVKCLQLANGAVY---------YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYH 76 ++ ++ N K+ L+ ++++ +++ Sbjct: 449 LIMQMRKVCNHPDLITGRASGEICYPPAAELVAECGKLALLDRLLKELRKGGHRVLIFSQ 508 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLN 124 L ++ + I E+ G + + G G+N Sbjct: 509 MTEMLNVIEAYLQDLGIQPLRIDGSVHWQQRRNDIAEFQSGNSDKWVFLLSTRAGGLGIN 568 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++ + W+ + + + R + G + V V+ L+ N+++ +L + Sbjct: 569 LTA-ADTVIIYDSDWNPHQ-----DAQAMDRCHRIGQTKPVLVFRLVTSNSVENRMLAKA 622 Query: 185 RTKSTIQDLLL 195 +K ++ +++ Sbjct: 623 ESKKALERIVI 633 >gi|192807314|ref|NP_001122317.1| transcription activator BRG1 isoform C [Homo sapiens] gi|167888964|gb|ACA09751.1| SMARCA4 isoform 2 [Homo sapiens] Length = 1617 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|192807320|ref|NP_001122320.1| transcription activator BRG1 isoform F [Homo sapiens] gi|167888962|gb|ACA09750.1| SMARCA4 isoform 3 [Homo sapiens] Length = 1613 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|119177637|ref|XP_001240571.1| hypothetical protein CIMG_07734 [Coccidioides immitis RS] Length = 1665 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 70/191 (36%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ + ++ Sbjct: 1321 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRQLQAGGHRALIFTQMTK 1364 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N + +I + S G G+NL G Sbjct: 1365 MLDILEQFLNVHGHRYLRLDGATKIEQRQMLTERFNNDPRILVFILSSRSGGLGINLT-G 1423 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1424 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1478 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1479 MLDDVVIQEGE 1489 >gi|73986598|ref|XP_867683.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 3 [Canis familiaris] gi|73986644|ref|XP_867874.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 24 [Canis familiaris] Length = 1614 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|291463271|ref|NP_001167550.1| transcription activator BRG1 isoform 3 [Mus musculus] gi|123790047|sp|Q3TKT4|SMCA4_MOUSE RecName: Full=Transcription activator BRG1; AltName: Full=ATP-dependent helicase SMARCA4; AltName: Full=BRG1-associated factor 190A; Short=BAF190A; AltName: Full=Protein brahma homolog 1; AltName: Full=SNF2-beta; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4 gi|74184874|dbj|BAE39059.1| unnamed protein product [Mus musculus] Length = 1613 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|47227437|emb|CAG04585.1| unnamed protein product [Tetraodon nigroviridis] Length = 2248 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 72/252 (28%), Gaps = 58/252 (23%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYD-------- 43 M++Y + + Y + +N EA NS + + + N + Sbjct: 901 MQKYDTLETKYYKHILTKNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPAASMEAQK 960 Query: 44 -----EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 E K+ L+ ++ K ++V L L+ + Sbjct: 961 TPTGAYEGSALTKASGKLMLLQKMLRKLKEQGHRVLVFSQMTKMLDLLEDFLDHEGYKYE 1020 Query: 97 D----------PCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE- 143 I +N + G G+NL + ++ F W+ Sbjct: 1021 RIDGGITGALRQEAIDRFNAPGACQFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPHND 1079 Query: 144 --------------------HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + + +R + G V +Y + + +++E + Q Sbjct: 1080 IQVAVGSAGRGAARCGADLNRRPSLPAQAFSRAHRIGQANKVMIYRFVTRASVEERITQV 1139 Query: 184 LRTKSTIQDLLL 195 + K + L++ Sbjct: 1140 AKRKMMLTHLVV 1151 >gi|192807316|ref|NP_001122318.1| transcription activator BRG1 isoform D [Homo sapiens] gi|167888966|gb|ACA09752.1| SMARCA4 isoform 4 [Homo sapiens] gi|307685613|dbj|BAJ20737.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [synthetic construct] Length = 1616 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1007 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1066 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1067 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1126 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1127 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1182 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1183 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1231 >gi|323138387|ref|ZP_08073457.1| SNF2-related protein [Methylocystis sp. ATCC 49242] gi|322396334|gb|EFX98865.1| SNF2-related protein [Methylocystis sp. ATCC 49242] Length = 828 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 76/200 (38%), Gaps = 21/200 (10%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 L ++ A + ++ ++ + Y +++ V +++ AL + A +V Sbjct: 494 FLADKDQRRLTCALQNMR---MSCNSTYLLDQQTDHGVKADELAALFEDLFAEPEAKAVV 550 Query: 74 AYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHG 122 + +F G DK P ++ + + + + G Sbjct: 551 FSQWTRTHDIIIRRLEMRKLGYVSFHGGVPSDKRPELVERFRDDPACRVFL-STDAGSTG 609 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ+ + LV L W+ +Q I RI + G R V V +A+ TI+E +L Sbjct: 610 LNLQH-ASTLVNMDLPWNPAILEQRIARI-----HRMGQIRPVRVINFVAKGTIEEGMLS 663 Query: 183 RLRTKSTIQDLLLNALKKET 202 L K ++ +L+ E Sbjct: 664 VLAFKRSLSAGILDGGTGEI 683 >gi|156357062|ref|XP_001624043.1| predicted protein [Nematostella vectensis] gi|156210795|gb|EDO31943.1| predicted protein [Nematostella vectensis] Length = 863 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 70/218 (32%), Gaps = 30/218 (13%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-------KHWKEVH 52 K Y + G + N S + N +D Sbjct: 260 KYYKAILMKDYDIFSTDGPSRNKLN--SILTNLRKCVNHPYLFDGVEPEPFALGEHLITA 317 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K+ A++ ++ +++ L +Q ++ Sbjct: 318 SGKLHAIDQLLSYLYKRGHKVLMFSQMTRMLDIVQDYLGYRGYAYERLDGSVRGEERYIA 377 Query: 101 IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+ +NE + + + G GLNL + ++F ++ + + R + Sbjct: 378 IKNFNEEQDNFIFLLSTKAGGQGLNLMS-ADTVIFVDSDYNPQN-----DLQAAARAHRI 431 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V + L+ +NT++E++L+ K + + ++ Sbjct: 432 GQTRPVKIIRLVGRNTVEEIILKHADDKMRLTNNVIEG 469 >gi|312383001|gb|EFR28245.1| hypothetical protein AND_04056 [Anopheles darlingi] Length = 1726 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPC 99 K + L+ ++ + A+ +++ F L +++ + Sbjct: 578 SSGKFRKLDELLPQLKADGHRVLIFSQFTMMLDIMERYLKIRKHGYLRLDGSTAVTDRQE 637 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ + + + + G G+NL + ++ + ++ ++ R + Sbjct: 638 LIDQYTSDPNLFVFLLSTKAGGLGINLTA-ADTVIIHDIDFNP-----YNDKQAEDRAHR 691 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ V +Y I++ +I+E +++ + K ++ + Sbjct: 692 MGQKKPVTIYKFISEGSIEEGMMEIAQQKLQLEKDVTE 729 >gi|308475524|ref|XP_003099980.1| hypothetical protein CRE_20884 [Caenorhabditis remanei] gi|308266032|gb|EFP09985.1| hypothetical protein CRE_20884 [Caenorhabditis remanei] Length = 1429 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 35/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------- 53 Y ++ L D + A + ++ V +L N ++ + H Sbjct: 740 IYRHMKKGLLLD-AKMSSGARSLSNTIVHLRKLCNHPFLFETIEDSCRTHWKVNEVSGKD 798 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ I+ K +++ + + + D+ Sbjct: 799 LMRVAGKLELLDRILPKLKATGHRVLMFFQMTKMMDIFEDYLHFRNHTYLRLDGSTKPDE 858 Query: 97 DPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G GLNLQ + ++ F W+ + Sbjct: 859 RGELLSLYNAPDSEYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQD 912 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 913 RAHRIGQKKEVRVLRLITANSVEEKMLAVARYKLNVDEKVIQAGK 957 >gi|73999360|ref|XP_850491.1| PREDICTED: similar to DNA repair and recombination protein RAD54B (RAD54 homolog B) isoform 8 [Canis familiaris] Length = 912 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 73/248 (29%), Gaps = 55/248 (22%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD------ 53 ++ Y K + + +L N KE Sbjct: 557 IELYRKLLNSQAVRFCLQGLLGNSPHLICIGALKKLCNHPCLLFNSIKEKECSSTWDGKE 616 Query: 54 --------------------------EKIKALEVIIEKANA----APIIVAYHFNSDLAR 83 K++ L ++ + +++ ++ L Sbjct: 617 EKSLYEALLDVFPADYNPLMFSEEESGKLQVLLKLLAVIHELRPTEKVVLVSNYTQTLDI 676 Query: 84 -LQKAFPQGRTLDK---------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 + G T + + +N + + G GLNL GG+ Sbjct: 677 LQEVCKRHGYTYTRLDGQTPVSQRQQIVDSFNSKYSSDFIFLLSSKAGGVGLNL-IGGSH 735 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 736 LILYDIDWNPAT-----DIQAMSRVWRDGQKNPVHIYRLLTTGTIEEKIYQRQISKQDLS 790 Query: 192 DLLLNALK 199 +++ + Sbjct: 791 GAVVDLTR 798 >gi|169607196|ref|XP_001797018.1| hypothetical protein SNOG_06654 [Phaeosphaeria nodorum SN15] gi|111065365|gb|EAT86485.1| hypothetical protein SNOG_06654 [Phaeosphaeria nodorum SN15] Length = 1201 Score = 92.1 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 58/171 (33%), Gaps = 18/171 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 E KI+ L I+ ++ +IV F S L ++ + Sbjct: 964 DPEYDASDLTPSTKIRQLLSILEKETPDHKVIVFSQFTSMLDLIEPFLRRQGYNFTRYDG 1023 Query: 91 -GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 R ++ + + + +L GLNL + +V +W+ +E Sbjct: 1024 SMRNDLREASLHKLREDKRTRVLLCSLKCGSLGLNLTA-ASRVVIMEPFWNP-----FVE 1077 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + V VY L N+++E +L+ K + + L K Sbjct: 1078 EQAIDRVHRLNQTVDVTVYRLSIHNSVEERILELQEAKRKLANAALEGGKA 1128 Score = 38.2 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 10/40 (25%), Gaps = 4/40 (10%) Query: 4 YHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGA 39 Y + L G + + ++ Q N Sbjct: 670 YDRLSDRAQSRLDEMMGGAKQDYIGALVLLLRLRQACNHP 709 >gi|73986624|ref|XP_867800.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 16 [Canis familiaris] Length = 1594 Score = 92.1 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 988 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1047 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1048 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1107 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1108 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1163 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1164 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1212 >gi|328864923|gb|EGG13309.1| DEAD-box RNA helicase [Dictyostelium fasciculatum] Length = 1558 Score = 92.1 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 18/161 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQ 102 D + L+ + K + A +V + S L ++ Q + I+ Sbjct: 1394 DSLMSELDKVHRKDSDAKSLVFSQWTSMLDLIEIPLQQAGIGYVRLDGKLAQKQREANIK 1453 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ EG I + + G GLNL + + WW+ +Q I+R+ + G Sbjct: 1454 KFKEEGSIKVFLISMKAGGLGLNL-VVASHVFLLDPWWNPATEEQAIDRV-----YRIGQ 1507 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + V V + +N+I+E +L+ + K + L +KK+ Sbjct: 1508 NKNVNVTRFVIKNSIEERILKLQQNKKNLAQDTLQ-MKKQI 1547 Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 12/146 (8%), Positives = 38/146 (26%), Gaps = 6/146 (4%) Query: 2 KQYHKF----QRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + +R+ + + + ++ Q+ + D++ Sbjct: 1105 QIYKQLWNASKRKFINYYKNGTLMKNYAHILELLLRLRQVCDHPSLIKNIMQKNLFDDDE 1164 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 K++ ++ + ++ +K +D I P L + Sbjct: 1165 QKSIIDDANHQLVLEMLKSENYILPTEIGEKLKTIFGKDIEDQECILCMESLDNPCLTSC 1224 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDL 141 HG ++ + Sbjct: 1225 GHIFCHGCITKHFEENGSITDQNYLP 1250 >gi|226292087|gb|EEH47507.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1083 Score = 92.1 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 18/168 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQK-----------AFP 89 DE + + KI+ L I++K + IV F S L +++ Sbjct: 824 DDEPETPDHLASTKIRHLMKILKKESGDYKFIVFSFFTSMLTKIEPFLKGANIGYARYDG 883 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 R ++ + K +L + GLNL + +V +W+ +E Sbjct: 884 AMRNDMRENSLDRLRTSPKTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVE 937 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + V VY L +NT++E ++ K + + + Sbjct: 938 EQAIDRVHRLNQTIDVKVYKLTIRNTVEERIVDLQEHKRELANATIEG 985 Score = 38.2 bits (87), Expect = 0.63, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 15/43 (34%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + + L + G +I ++ ++ Q N Sbjct: 569 YSRLEQRTDKTLERMIGGNSINYASALVLLLRLRQACNHPDLV 611 >gi|126322839|ref|XP_001362962.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, isoform 2 [Monodelphis domestica] Length = 1612 Score = 92.1 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1006 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1065 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1066 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1125 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1126 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1181 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1182 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1230 >gi|312212592|emb|CBX92675.1| similar to chromodomain helicase (Chd1) [Leptosphaeria maculans] Length = 1610 Score = 92.1 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYD--------------EE 45 ++ Y Y L +G + + ++ + +N A+ + E Sbjct: 714 LEYYKNILTRNYEALNEGGAGHKQSLLNIVMELKKASNHALLFPNAEAKFIRGDATKDET 773 Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRT 93 K+ L+ ++ K A+ +++ L + Sbjct: 774 LKALITTSGKMMLLDRLLGKLKADGHRVLIFSQMVHMLDILTDYLKLRNYPFQRLDGTVP 833 Query: 94 LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I +N + G G+NL + ++ F W+ + + Sbjct: 834 AAERKIAIDHFNAPGSDDYCFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQ 887 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G ++ V VY L++++TI+E +L+R R K + Sbjct: 888 AMARAHRIGQQKPVSVYRLVSKDTIEEEILERARNKRML 926 >gi|307210254|gb|EFN86904.1| Chromodomain-helicase-DNA-binding protein 1 [Harpegnathos saltator] Length = 1825 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 71/222 (31%), Gaps = 38/222 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE- 60 K Y ++ G + ++ + N A ++ ++ +E Sbjct: 701 KNYSALRK-------GTKGSTMTFLNIVIELKKCCNHAFLTKPTEYERKDSNEDYLQQLI 753 Query: 61 ------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 ++ + +++ L + + + + Sbjct: 754 RGSGKLVLLDKLLVRLREKGHRVLIFSQMVRMLDIIGEYLQKKHFPFQRLDGSIKGELRK 813 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL + ++ F W+ + + R Sbjct: 814 QALDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQARA 867 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +N+++E +++R + K + L++ + Sbjct: 868 HRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVLDHLVIQRM 909 >gi|302913005|ref|XP_003050823.1| hypothetical protein NECHADRAFT_80466 [Nectria haematococca mpVI 77-13-4] gi|256731761|gb|EEU45110.1| hypothetical protein NECHADRAFT_80466 [Nectria haematococca mpVI 77-13-4] Length = 1514 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 75/215 (34%), Gaps = 33/215 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVI 62 + + + N + ++ + Y E ++ K+ L+V+ Sbjct: 1035 KMNKKERGSLN--NILMQLRKCLCHPFMYSEAIEERDHDPTVLQRNLVEASAKLLLLQVM 1092 Query: 63 IEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIP 110 + K +++ F + L ++ + I +N P Sbjct: 1093 LPKLQEKGHRVLIFSQFLNQLDIIEDFLGGLGYDYRRLDGSIGSLEKQRRIDAFNAPGSP 1152 Query: 111 LL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL + ++ ++ + + ++R + G K+ V + Sbjct: 1153 IFAFLLSTRAGGVGINL-ATADTVIILDPDFNPHQ-----DIQALSRAHRIGQKKKVLCF 1206 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L+ ++++E ++Q + K + L+ ++ + + Sbjct: 1207 QLMTVDSVEERIMQIGKKKMALDHALIESMDDDEL 1241 >gi|158301559|ref|XP_321235.4| AGAP001820-PA [Anopheles gambiae str. PEST] gi|157012531|gb|EAA01172.5| AGAP001820-PA [Anopheles gambiae str. PEST] Length = 1987 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 75/255 (29%), Gaps = 60/255 (23%) Query: 2 KQYHKFQR---------ELYCDLQGENI----EAFNSASKTVKCLQLANGAVYYDEEKHW 48 + Y F R E ++ G+ + + + N H Sbjct: 1660 RLYEDFSRMHLHSSDIRECLENIDGQMAGPANKKTHVFQALRYLQNVCNHPKLVLSPSHP 1719 Query: 49 KE-----------------VHDEKIKALEVIIEKA----------NAAPIIVAYHFNSDL 81 + H K+ L+ ++ N ++ + L Sbjct: 1720 EYQMIVGEFTRNGSSMDDIEHSAKLPVLKQLLLDCGIGTNEDVSVNQHRALIFCQLKAML 1779 Query: 82 ARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 ++ + ++N + I +L G GLNL Sbjct: 1780 DIVENDLLKKHLPAVSYLRLDGSVPPSTRHHIVTKFNGDPSIDVLLLTTQVGGLGLNLT- 1838 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + ++F W+ M + + R + G K+ V VY LI + +++E ++ + K Sbjct: 1839 GADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRKSLEEKIMGLQKFK 1893 Query: 188 STIQDLLLNALKKET 202 + +++ Sbjct: 1894 LLTANTVVSDENASM 1908 >gi|73997428|ref|XP_867852.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 16 [Canis familiaris] Length = 1756 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 977 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1036 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1037 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1096 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1097 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1150 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1151 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1192 >gi|73997424|ref|XP_867839.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 14 [Canis familiaris] Length = 1779 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 851 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 910 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 911 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 970 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 971 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1024 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1025 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1066 >gi|5917754|gb|AAD56022.1|AF181825_1 chromodomain helicase DNA binding protein 1 [Aegolius funereus] Length = 918 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + Sbjct: 345 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDGNEFYNKQEALQH 404 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 405 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 464 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 465 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 518 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 519 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 562 >gi|297739617|emb|CBI29799.3| unnamed protein product [Vitis vinifera] Length = 1557 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 21/199 (10%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--AN 67 L ++ E + + T K + + K++ L++++++ A Sbjct: 1171 HLIQEIDSELPVSKPALQLTYKI--FGSSPPMQSFDPAKLLTDSGKLQTLDILLKRLRAE 1228 Query: 68 AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHP 116 +++ L L+ T+ ++++ I + Sbjct: 1229 NHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRSDIFVFLLST 1288 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++F+ W+ + + R + G + V VY LI + T+ Sbjct: 1289 RAGGLGINLTA-ADTVIFYESDWNPTL-----DLQAMDRAHRLGQTKDVTVYRLICKETV 1342 Query: 177 DELVLQRLRTKSTIQDLLL 195 +E +LQR KST+Q L++ Sbjct: 1343 EEKILQRASQKSTVQQLVM 1361 >gi|73986620|ref|XP_867786.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 14 [Canis familiaris] Length = 1605 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 998 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1057 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1058 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1117 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1118 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1173 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1174 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1222 >gi|308160724|gb|EFO63198.1| Transcriptional activator, putative [Giardia lamblia P15] Length = 1860 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 71/164 (43%), Gaps = 19/164 (11%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 K+ AL+ ++ P+++ L L+ G ++K Sbjct: 1664 KDSGKLTALDKLLHTLYKTREPVLIYCQMTKMLDLLEDYLVFRRYNYVRLDGGDAVNKRG 1723 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + + I + + GLNL + ++F+ W+ + + + R Sbjct: 1724 QIVERFMTDDTIFVFLLSTRAASLGLNLTR-ASTVIFYENDWNPTQ-----DAQAMDRVH 1777 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K++V +Y L+ + +IDE +L++ R+K +Q+L+L +++ Sbjct: 1778 RLGQKKSVVIYRLVTEGSIDEKILEKARSKEIVQELVLRGQRRD 1821 >gi|60360510|dbj|BAD90499.1| mKIAA4075 protein [Mus musculus] Length = 1945 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 1005 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1064 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1065 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1124 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1125 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1178 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1179 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1220 >gi|24047226|gb|AAH38596.1| CHD4 protein [Homo sapiens] gi|167773199|gb|ABZ92034.1| chromodomain helicase DNA binding protein 4 [synthetic construct] Length = 1937 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 981 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1040 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1041 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1100 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1101 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1154 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1155 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1196 >gi|212546089|ref|XP_002153198.1| SNF2 family helicase/ATPase (Swr1), putative [Penicillium marneffei ATCC 18224] gi|210064718|gb|EEA18813.1| SNF2 family helicase/ATPase (Swr1), putative [Penicillium marneffei ATCC 18224] Length = 1644 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 65/189 (34%), Gaps = 35/189 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ + ++ Sbjct: 1320 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRELQAGGHRALIFTQMTK 1363 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYG 128 L L++ + +N I S G G+NL G Sbjct: 1364 MLDILEQFLNIHGHRYLRLDGTTKVEQRQMLTDRFNNDNRILAFILSTRSGGLGINLT-G 1422 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1423 ADCVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEFTIESNILRKANQKR 1477 Query: 189 TIQDLLLNA 197 + D+++ Sbjct: 1478 MLDDVVIQE 1486 >gi|169146018|emb|CAQ13521.1| novel protein similar to vertebrate chromodomain helicase DNA binding protein family [Danio rerio] Length = 2230 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 69/234 (29%), Gaps = 43/234 (18%) Query: 2 KQYHKFQRELYCDLQGE---NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------- 51 K Y + L N N + ++ + N + Sbjct: 814 KYYRAILERNFSFLSMGATQNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYD 873 Query: 52 -------------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 K+ L+ ++ KA +++ L L+ R L + Sbjct: 874 PLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 933 Query: 97 D----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I +++ + + G G+NL + F W+ + Sbjct: 934 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCV-IFDSDWNPQN- 991 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + R + G +AV VY LI +N+ + +L + K + +L ++ Sbjct: 992 ----DLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSM 1041 >gi|73997442|ref|XP_867901.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 22 [Canis familiaris] Length = 1933 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 977 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1036 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1037 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1096 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1097 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1150 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1151 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1192 >gi|293347058|ref|XP_001063352.2| PREDICTED: chromodomain helicase DNA binding protein 4 [Rattus norvegicus] Length = 1928 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 984 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1043 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1044 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1103 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1104 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1157 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1158 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1199 >gi|18043584|gb|AAH20056.1| Hells protein [Mus musculus] Length = 275 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + ++V Sbjct: 1 MMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLVFSQ 60 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + I +N + + L + G G+NL Sbjct: 61 MTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINL 120 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 121 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 174 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 175 AKRKLEKLIIH 185 >gi|328786333|ref|XP_001120496.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Apis mellifera] Length = 1667 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 73/222 (32%), Gaps = 38/222 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE- 60 K Y+ ++ G + ++ + N A ++ ++ ++E Sbjct: 602 KNYNALRK-------GVKGSTMTFLNIVIELKKCCNHAFLTKPTENERKDNNEDYLQQLI 654 Query: 61 ------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 ++ + +++ L L + + + Sbjct: 655 RGSGKLVLLDKLLVRLRETGHRVLIFSQMVRMLDILGEYLQKKHFPFQRLDGSIKGELRK 714 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL + ++ F W+ + + R Sbjct: 715 QALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQARA 768 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +N+++E +++R + K + L++ + Sbjct: 769 HRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVLDHLVIQRM 810 >gi|222623475|gb|EEE57607.1| hypothetical protein OsJ_07989 [Oryza sativa Japonica Group] Length = 2104 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 70/168 (41%), Gaps = 19/168 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------- 89 Y ++ + K++ L +++ K+ ++ L L++ Sbjct: 1127 YFPDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLD 1186 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ +Q +N K L S G G+NL G + ++F+ W+ + Sbjct: 1187 GSTQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINL-VGADTVIFYDSDWNPA-----M 1240 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ R + G R V +Y LI+++TI+E +L++ K + DL++ Sbjct: 1241 DQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ 1288 >gi|50302399|ref|XP_451134.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640265|emb|CAH02722.1| KLLA0A03069p [Kluyveromyces lactis] Length = 895 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 73/245 (29%), Gaps = 51/245 (20%) Query: 3 QYHKF-QRELYCDLQGENIEAFNSASKTVKCLQLANGA---------------------- 39 Y F + + + +L N Sbjct: 577 LYQHFIESRAVKKIVKGDSNQP--LKAIGLLKKLCNHPDLLELSEDIPGSEELIPDDYQS 634 Query: 40 ----VYYDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR 92 + K L + K + I++ ++ L ++K Sbjct: 635 SVDSRTSRNRSVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNH 694 Query: 93 ----------TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++K + +N+ + + + G G+NL G N L+ W+ Sbjct: 695 YGVLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILLDPDWN 753 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q + R + G K+ F+Y I+ TI+E + QR K ++ +++ K+ Sbjct: 754 PAADQ-----QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDE-KE 807 Query: 201 ETIHV 205 + + Sbjct: 808 DVERL 812 >gi|119173620|ref|XP_001239222.1| hypothetical protein CIMG_10244 [Coccidioides immitis RS] Length = 970 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 60/166 (36%), Gaps = 21/166 (12%) Query: 53 DEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------- 97 KI I+ + N I+ F + L L+ + + Sbjct: 792 SSKIDKALEILREIESCNNGEKTIIFSQFTTLLDLLEVPIMREGWHYRRYDGSMSPIQRN 851 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + ++ + GLNL + ++ F +W+ IE + R Sbjct: 852 EAVLEFSDNENCKIMLVSLKAGNAGLNLVA-ASQVIIFDPFWNP-----YIEEQAIDRAH 905 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G R V V+ ++ ++T+++ +L+ K + + L+ + + Sbjct: 906 RIGQIRPVMVHRILVRDTVEDRILELQEKKRELIENALDERASQNL 951 Score = 35.5 bits (80), Expect = 4.0, Method: Composition-based stats. Identities = 5/55 (9%), Positives = 12/55 (21%), Gaps = 6/55 (10%) Query: 4 YHKFQRELYCD----LQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVH 52 Y +++ L + N ++ Q V+ Sbjct: 545 YQSLEQKTQNQFNRYLDNGTVGKHYSNVLVMLLRLRQACCHPHLIQLFSDDSHVN 599 >gi|33440456|gb|AAH56199.1| Smarca2 protein [Mus musculus] Length = 985 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 390 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 449 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 450 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 509 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 510 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 565 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 566 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 614 >gi|327351880|gb|EGE80737.1| chromodomain helicase hrp3 [Ajellomyces dermatitidis ATCC 18188] Length = 1549 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--------------EE 45 ++ Y + Y L G + + + ++ + +N + E Sbjct: 713 LEYYKNILTKNYAALNQGSKGQKQSLLNIMMELKKASNHPFMFPNAESRILEGKTGREEM 772 Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 773 MRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIA 832 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + + G G+NL + +V F W+ + + Sbjct: 833 AGPRRLSIEHFNAPESNDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 886 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E VL+R R K + Sbjct: 887 AMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLL 925 >gi|308163064|gb|EFO65427.1| DNA repair and recombination protein Rhp26p [Giardia lamblia P15] Length = 930 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 66/226 (29%), Gaps = 38/226 (16%) Query: 2 KQYHKFQ--RELYCDLQ---------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 K Y + E L+ G I +K ++ + + Sbjct: 476 KLYIQLLSSDETITKLKQLSATSRSFGGGITKLT-MAKLIQLQHICDHPSLLSTASSDDS 534 Query: 51 V---HDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK-------------AFPQG 91 K+ L + + ++V L +++ Sbjct: 535 ELCESSCKLTYLMEQLTTLWNQSHDKVLVFCQGRMMLNIVERIILETASFKNAYLRMDGN 594 Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D P I + + +I L G GLNL N + + W+ I+ Sbjct: 595 IPVDARPALISRFSTDPQIRLFLLTTRVGGLGLNLTA-ANHVFLLNPNWNPT-----IDD 648 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V R + + V VY + TI+E + R K + +L+ Sbjct: 649 QSVERCWRITQSKKVIVYKVFTGGTIEEKIFNRQIYKRLLVSRVLD 694 >gi|296815930|ref|XP_002848302.1| chromodomain helicase hrp3 [Arthroderma otae CBS 113480] gi|238841327|gb|EEQ30989.1| chromodomain helicase hrp3 [Arthroderma otae CBS 113480] Length = 1524 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 74/218 (33%), Gaps = 34/218 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEK 46 ++ Y + Y L G + + ++ + +N + +++ Sbjct: 715 LELYKNILTKNYDALNHGGKGPKPSLLNIMMELKKASNHPFMFWGAEDQAGGSTRREDQL 774 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 K+ L+ ++ K + +++ L L + Sbjct: 775 KALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGFNYQRLDGTIAA 834 Query: 98 ---PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I+ +N + G G+NL + ++ F W+ + + Sbjct: 835 GPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQA 888 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++T++E VL+R R K + Sbjct: 889 MARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLL 926 >gi|330796151|ref|XP_003286132.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum] gi|325083877|gb|EGC37318.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum] Length = 2186 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 30/228 (13%), Positives = 72/228 (31%), Gaps = 36/228 (15%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYD--EEKHWKEVH----- 52 K Y + + L+ + + + + ++ + N E E+ Sbjct: 740 KYYRAIYEKNFAFLRKNCKGQQGPSLLNIMMELRKCCNHPYLIKGVEHSETNEISEKDEV 799 Query: 53 -------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ ++ ++ K +++ S L L + Sbjct: 800 YTKLIQASGKLVLVDKLLPKLKAGGHKVLIFSQMVSVLDILDDYLTFRGYPHERIDGSIK 859 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I +++ + + G G+NL + ++ F W+ + + Sbjct: 860 GNDRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTA-ADTVIIFDSDWNPQN-----DLQ 913 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY L+ +NT + L+ R K + ++L + Sbjct: 914 AQARCHRIGQDKMVKVYRLVTKNTYERLMFDRASKKLGLDRVVLTKMN 961 >gi|299753319|ref|XP_001833199.2| SNF2 family domain-containing protein [Coprinopsis cinerea okayama7#130] gi|298410246|gb|EAU88472.2| SNF2 family domain-containing protein [Coprinopsis cinerea okayama7#130] Length = 840 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 18/147 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKIP-- 110 I I++ ++ L ++ K + ++N+ Sbjct: 610 IHTQTNDKIVLISNYTQTLDLFEKLLRSKKYGYFRLDGTMSITKRQKLVDQFNDPNGKEF 669 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL G N L+ F W+ Q + R + G K+ FVY Sbjct: 670 IFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQ-----QALARVWRDGQKKECFVYRF 723 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+ TI+E + QR +K + +++ Sbjct: 724 ISTGTIEEKIFQRQASKQALSSAVVDE 750 >gi|255728815|ref|XP_002549333.1| DNA repair and recombination protein RAD54 [Candida tropicalis MYA-3404] gi|240133649|gb|EER33205.1| DNA repair and recombination protein RAD54 [Candida tropicalis MYA-3404] Length = 847 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 69/180 (38%), Gaps = 19/180 (10%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----- 92 G E + W V ++ I+K I++ ++ L ++K + Sbjct: 591 GGFRNSEVQTWFSVKFMILERFLHKIKKETNDKIVLISNYTQTLDLIEKMCRNKKYGVLR 650 Query: 93 -----TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +++K + ++N + + G G+NL G N LV W+ Q Sbjct: 651 LDGTLSINKRQKLVDKFNNPDGSEFIFLLSSKAGGCGINL-IGANRLVLIDPDWNPASDQ 709 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G K+ F+Y I+ TI+E + QR K + +++ K++ + Sbjct: 710 -----QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLQLSSCVVDE-KEDVDRL 763 >gi|195428619|ref|XP_002062369.1| GK17504 [Drosophila willistoni] gi|194158454|gb|EDW73355.1| GK17504 [Drosophila willistoni] Length = 2023 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYYDEE--------KHW 48 Q++ Y + +N EA NS + + + N + Sbjct: 993 AMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEALTSAGGL 1052 Query: 49 KEVHD-----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 E++ K+ L ++++ + +++ L L+ + + Sbjct: 1053 YEINSLTKAAGKLVLLSKMLKQLKSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGS 1112 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + + G G+NL + ++ + W+ + Sbjct: 1113 ITGAVRQEAIDRFNAPGAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1166 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 1167 IQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1212 >gi|71024321|ref|XP_762390.1| hypothetical protein UM06243.1 [Ustilago maydis 521] gi|46101890|gb|EAK87123.1| hypothetical protein UM06243.1 [Ustilago maydis 521] Length = 986 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 58/175 (33%), Gaps = 17/175 (9%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG---- 91 + + + + L I IV F S L ++ + Sbjct: 797 TSHSQDLFASSSGSTKTRKMLSLLSQIRAADATEKTIVFSQFTSFLNIVEPHLQRHGFKY 856 Query: 92 ------RTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + ++ ++ + ++ + GLNL + ++ LWW+ + Sbjct: 857 VRYDGSMKPQERESALERIRSDASVTVILISFKAGSTGLNLTS-CSRVILMDLWWNPQ-- 913 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 IE R + G R V +Y L ++T++E +L+ K + L K Sbjct: 914 ---IEEQAFDRAHRLGQTRDVTIYKLSIKDTVEERILKLQEKKRALAKAALEGSK 965 >gi|30687235|ref|NP_197432.2| homeotic gene regulator, putative [Arabidopsis thaliana] gi|332005300|gb|AED92683.1| Homeotic gene regulator [Arabidopsis thaliana] Length = 1064 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 80/214 (37%), Gaps = 26/214 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------DEEKHWKEVHDEKIK 57 Y + L N ++ + + T++ + N + +K K + Sbjct: 639 YKQVTDVGRVGLHSGNGKSKSLQNLTMQLRKCCNHPYLFVGADYNMCKKPEIVRASGKFE 698 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 L+ ++ K I++ + + D+ ++++N Sbjct: 699 LLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFN 758 Query: 106 EGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E P + G GLNLQ + ++ F W+ + +++ R + G K+ Sbjct: 759 EPDSPYFMFLLSTRAGGLGLNLQT-ADTIIIFDSDWNPQ-----MDQQAEDRAHRIGQKK 812 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +I+E++L+R + K I ++ A Sbjct: 813 EVRVFVLVSIGSIEEVILERAKQKMGIDAKVIQA 846 >gi|327299934|ref|XP_003234660.1| chromodomain helicase [Trichophyton rubrum CBS 118892] gi|326463554|gb|EGD89007.1| chromodomain helicase [Trichophyton rubrum CBS 118892] Length = 1558 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 74/218 (33%), Gaps = 34/218 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEK 46 ++ Y + Y L G + + ++ + +N + +++ Sbjct: 743 LELYKNILTKNYDALNHGGKGPKPSLLNIMMELKKASNHPFMFWGPEEQAGGSTRREDQL 802 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 K+ L+ ++ K + +++ L L + Sbjct: 803 KALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGFNYQRLDGTIAA 862 Query: 98 ---PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I+ +N + G G+NL + ++ F W+ + + Sbjct: 863 GPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQA 916 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++T++E VL+R R K + Sbjct: 917 MARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLL 954 >gi|170594229|ref|XP_001901866.1| BRM protein [Brugia malayi] gi|158590810|gb|EDP29425.1| BRM protein, putative [Brugia malayi] Length = 1412 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 75/225 (33%), Gaps = 36/225 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------- 52 Y Q+ L D + A + V +L N ++ + Sbjct: 840 LYQHMQKGLLIDSKHAGGRAL--MNTVVHLRKLCNHPFLFENVEDECREFWKVPDVSGKD 897 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ ++ K A+ I++ S + ++ D+ Sbjct: 898 LYRVSGKFELLDRVLPKLKASGHRILMFCQMTSLMTIMEDYLNYREFKYLRLDGSTKPDE 957 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + + G GLNLQ + ++ F W+ + Sbjct: 958 RGQLLELYNAPNSEYFIFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQD 1011 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G R V V L+ N+I+E +L R K + + ++ A K Sbjct: 1012 RAHRIGQSREVRVLRLVTVNSIEEKILAAARYKLNVDEKVIQAGK 1056 >gi|5917756|gb|AAD56024.1|AF181827_1 chromodomain helicase DNA binding protein 1 [Nymphicus hollandicus] Length = 918 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + Sbjct: 345 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQH 404 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 405 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 464 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 465 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 518 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 519 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 562 >gi|326471073|gb|EGD95082.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] Length = 1050 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%) Query: 53 DEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCT 100 KI+ L ++++ + IV F S L +++ G ++ Sbjct: 809 SAKIRHLMRVLKRESGQFKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASL 868 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N +L + GLNL + +V +W+ +E + R + Sbjct: 869 NRLRNSSGTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEEQAIDRVHRLN 922 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++E +L+ K + + Sbjct: 923 QTIDVKVYKLTIKGTVEERILELQERKRELAKSTIEG 959 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + R L + G+NI + ++ Q N Sbjct: 566 YQRLEQRADRSLERMIGGQNISYAGALVLLLRLRQACNHPDLV 608 >gi|159125579|gb|EDP50696.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus fumigatus A1163] Length = 1509 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 67/198 (33%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDE-------------KIKALEVIIEKANAAPIIVAY 75 ++ + Y E + + K+ + + K +++ Sbjct: 953 LMQLRKCLCHPFVYSEAIEERTANSAASHKHLVEASGKLKLLEIMLPKLKQRGHRVLIFS 1012 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F +L ++ L + I E+N P S G G+ Sbjct: 1013 QFLDNLDIVEDFLDGLGLLHRRLDGRMTSLEKQKRIDEYNADNSPYFAFLLSTRSGGVGI 1072 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + ++R + G K V V+ L+ + +++E ++Q Sbjct: 1073 NL-ATADTVIIMDPDFNPHQDM-----QALSRAHRIGQKNKVLVFQLMTRGSVEEKIMQI 1126 Query: 184 LRTKSTIQDLLLNALKKE 201 + K + +L++ + E Sbjct: 1127 GKKKMVLDHVLIDRMVAE 1144 >gi|310793696|gb|EFQ29157.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1569 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 72/218 (33%), Gaps = 34/218 (15%) Query: 13 CDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKA 58 + I + S ++ + Y E + + K+ Sbjct: 1090 AIFADDKINKRDRGSLNNILMQLRKCLCHPFMYSEAVEERSLDPVKIHQNLISASGKLML 1149 Query: 59 LEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE 106 L +++ K +++ F L ++ + I +NE Sbjct: 1150 LNIMLPKLKERGHRVLIFSQFLDQLDIMEDFLNGLGFQHRRLDGKINSLEKQKHIDAFNE 1209 Query: 107 GKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G G+NL + ++ ++ + + ++R + G K Sbjct: 1210 PGSEIFAFLLSTRAGGVGINL-ATADTVIILDPDFNPHQ-----DIQAISRAHRIGQKNK 1263 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V + L+ +N+ +E ++Q R K + +L+ A+ +E Sbjct: 1264 VLCFQLMTKNSAEEKIMQIGRKKMALDHVLIEAMDEEG 1301 >gi|73997404|ref|XP_867762.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 4 [Canis familiaris] Length = 1949 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 977 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1036 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1037 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1096 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1097 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1150 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1151 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1192 >gi|47211143|emb|CAF96563.1| unnamed protein product [Tetraodon nigroviridis] Length = 1919 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 31/249 (12%), Positives = 73/249 (29%), Gaps = 58/249 (23%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + Sbjct: 725 KQYYKWILTRNYKALSKGVKGSTSGFLNIMMELKKCCNHCYLVRPPEEDLNKSEALQQLV 784 Query: 53 --DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 K+ L+ ++ + +++ L L + L + Sbjct: 785 RSSGKLVLLDKLLIRLKERGHRVLIFSQMVRMLDILADYLRSRQFLFQRLDGSIKGEMRK 844 Query: 99 CTIQEWNEGKIPL-----------------------------LFAHPASCGHGLNLQYGG 129 + +N + + G G+NL Sbjct: 845 QALDHFNAEGSEVRGHAGSAWPGSRSSLTAPAPLPLCLQDFCFLLSTRAGGLGINL-ASA 903 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + +V F W+ + + R + G KR V +Y L+ + +++E +++R + K Sbjct: 904 DTVVIFDSDWNPQN-----DLQAQARAHRIGQKRQVNIYRLVTKGSVEEDIIERAKKKMV 958 Query: 190 IQDLLLNAL 198 + L++ + Sbjct: 959 LDHLVIQRM 967 >gi|326500828|dbj|BAJ95080.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1731 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 73/231 (31%), Gaps = 36/231 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 KQY+K +R +G + + V+ + N ++ H + Sbjct: 845 KQYYKWILERNFQNLNKGVRGNQVSLLNVVVELKKCCNHPFLFESADHGYGGDSIGDRNK 904 Query: 60 EVIIEKANA----------------APIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 I ++ +++ L L + + Sbjct: 905 VERIVMSSGKLVLLDKLLLRLRETNHRVLIFSQMVRMLDILSEYLSLRGFQFQRLDGSTR 964 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N + G G+NL + ++ F W+ + + Sbjct: 965 ADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQ 1018 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1019 AMSRAHRIGQQDTVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNAEG 1069 >gi|292622418|ref|XP_685699.4| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 1 [Danio rerio] Length = 1953 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 23/222 (10%), Positives = 60/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 K Y + L + + + + N + Sbjct: 994 KYYKYILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPTAATEAPKMPNGMYDGS 1053 Query: 52 ------HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + + K +++ L L+ + Sbjct: 1054 ALTKASGKLMLLFKMLKKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGVTGG 1113 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N P + + G G+NL + ++ + W+ + Sbjct: 1114 MRQEAIDRFNAPGAPQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1167 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1168 SRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKMMLTHLVV 1209 >gi|195116617|ref|XP_002002850.1| GI10771 [Drosophila mojavensis] gi|193913425|gb|EDW12292.1| GI10771 [Drosophila mojavensis] Length = 1908 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 71/225 (31%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 KQY+K + +G+ + ++ + N A + Sbjct: 783 KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELFGLQQDEALQ 842 Query: 51 ---VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L + + Sbjct: 843 VLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFSFQRLDGSIKGE 902 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 903 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 956 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 957 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 1001 >gi|159470413|ref|XP_001693354.1| hypothetical protein CHLREDRAFT_117345 [Chlamydomonas reinhardtii] gi|158277612|gb|EDP03380.1| predicted protein [Chlamydomonas reinhardtii] Length = 526 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 64/172 (37%), Gaps = 20/172 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFP------ 89 + + H K+ LE+++ + + +++ ++ L L+ Sbjct: 300 APVYKPGSCQAYHSGKVAVLEMMLKAVRDSGSGDKVVLVSNYTEALDILEGMCRAHAWAF 359 Query: 90 ----QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG-GNILVFFSLWWDLEEH 144 G + K + +N+ P +S G+ L N LV F W+ Sbjct: 360 LRLDGGCDVKKRQPLVDCFNDPAHPSFLLLLSSKAGGVGLNIIGANRLVLFDPDWNPAN- 418 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K+ V++Y L+ +I+E V QR K + +++ Sbjct: 419 ----DLQAMARVWRQGQKKKVWIYRLLTTGSIEEKVYQRQVAKQGLSAAIVD 466 >gi|297807991|ref|XP_002871879.1| hypothetical protein ARALYDRAFT_488814 [Arabidopsis lyrata subsp. lyrata] gi|297317716|gb|EFH48138.1| hypothetical protein ARALYDRAFT_488814 [Arabidopsis lyrata subsp. lyrata] Length = 1061 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 81/214 (37%), Gaps = 26/214 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIK 57 Y + L N ++ + + T++ + N + + K + Sbjct: 638 YKQVTDVGRVGLHSGNGKSKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGKFE 697 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN 105 L+ ++ K I++ + L+ + + ++++N Sbjct: 698 LLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLTLNDYMYLRLDGTTKTDQRGVLLKQFN 757 Query: 106 EGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E + P + G GLNLQ + ++ F W+ + +++ R + G K+ Sbjct: 758 EPESPYFMFLLSTRAGGLGLNLQT-ADTIIIFDSDWNPQ-----MDQQAEDRAHRIGQKK 811 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V+ L++ +I+E++L+R + K I ++ A Sbjct: 812 EVRVFVLVSIGSIEEVILERAKQKMGIDAKVIQA 845 >gi|270014262|gb|EFA10710.1| domino [Tribolium castaneum] Length = 2260 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 71/179 (39%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 ++A+ V + + K++ L+ ++ K + +++ L L+ Sbjct: 1443 LHRIASAMVTQFPDPRLIQYDCGKLQTLDKLLRKLKSEGHRVLIFTQMTKMLDVLEAFLN 1502 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ +N + +I S G G+NL G + ++F+ Sbjct: 1503 FHGHIYLRLDGTTKVDQRQLLMERFNGDTRIFAFILSTRSGGIGVNLT-GADTVIFYDSD 1561 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y L+++ TI+E +L++ K + DL + Sbjct: 1562 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEENILKKANQKRLLGDLAIEG 1615 >gi|239613379|gb|EEQ90366.1| chromodomain helicase [Ajellomyces dermatitidis ER-3] Length = 1513 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--------------EE 45 ++ Y + Y L G + + + ++ + +N + E Sbjct: 713 LEYYKNILTKNYAALNQGSKGQKQSLLNIMMELKKASNHPFMFPNAESRILEGKTGREEM 772 Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 773 MRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIA 832 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + + G G+NL + +V F W+ + + Sbjct: 833 AGPRRLSIEHFNAPESNDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 886 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E VL+R R K + Sbjct: 887 AMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLL 925 >gi|73997440|ref|XP_853783.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 2 [Canis familiaris] Length = 1937 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 981 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1040 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1041 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1100 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1101 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1154 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1155 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1196 >gi|162312253|ref|NP_596080.2| TATA-binding protein associated factor Mot1 [Schizosaccharomyces pombe 972h-] gi|81170682|sp|O43065|MOT1_SCHPO RecName: Full=Probable helicase mot1; AltName: Full=Modifier of transcription 1; AltName: Full=TBP-associated factor mot1 gi|157310435|emb|CAA21270.2| TATA-binding protein associated factor Mot1 [Schizosaccharomyces pombe] Length = 1953 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 60/246 (24%) Query: 5 HKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------- 50 + + + QG + + + +L N EKH K Sbjct: 1633 EELEDDETEKTQGTRKKKSQKAHIFQALQYMRKLCNHPALILTEKHPKRNAIVKQLAKEN 1692 Query: 51 ------VHDEKIKALEVIIEKA--------------------NAAPIIVAYHFNSDLARL 84 H K+ AL ++ + +++ L + Sbjct: 1693 SGLHDLKHAPKLTALGQLLRDCGLGNSSVNSNGIDSALTNAVSEHRVLIFCQLKDMLDMV 1752 Query: 85 QKAFPQG--------------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 +K Q + + N+ I +L G GLNL G + Sbjct: 1753 EKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNNDPSIDVLLLTTHVGGLGLNLT-GAD 1811 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++F W+ + + R + G K+ V VY LI + ++E ++ R K + Sbjct: 1812 TVIFVEHDWNPMR-----DLQAMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNV 1866 Query: 191 QDLLLN 196 ++N Sbjct: 1867 ASTVVN 1872 >gi|119570419|gb|EAW50034.1| helicase, lymphoid-specific, isoform CRA_i [Homo sapiens] Length = 839 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 65/192 (33%), Gaps = 30/192 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEK---ANAAPIIVAY 75 + + N + + K L+ ++ + +++ Sbjct: 564 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVVLLFS 623 Query: 76 HFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 S L L + + + +N + ++ + + G G+N Sbjct: 624 QMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGIN 683 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 684 LTA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERA 737 Query: 185 RTKSTIQDLLLN 196 K ++ L+++ Sbjct: 738 AAKRKLEKLIIH 749 >gi|118367847|ref|XP_001017133.1| Type III restriction enzyme, res subunit family protein [Tetrahymena thermophila] gi|89298900|gb|EAR96888.1| Type III restriction enzyme, res subunit family protein [Tetrahymena thermophila SB210] Length = 2184 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 68/224 (30%), Gaps = 37/224 (16%) Query: 3 QYHKF--QRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEK------------- 46 Y + + ++ S + ++ + N E + Sbjct: 1073 LYRAIYERNKSMLQKNFSSMAMNTSLNNLEMQLRKCCNHPFLIKEMEIELTQNFKTSEER 1132 Query: 47 -HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 K+ L+ +++K I++ F L L++ Sbjct: 1133 YKCLVDTSGKMILLDKLVQKYKIEGKKILIFSQFVYMLNLLEEYLRYRQLKYEKIDGSVK 1192 Query: 94 LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I +N+ + + G G+NL NI++ F W+ + + Sbjct: 1193 SKERQNAIDRFNDPDKKRDVFLLSTKAGGLGINLTS-ANIVIIFDSDWNPQN-----DVQ 1246 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G K+ V VY I + T + + +R K + + Sbjct: 1247 ATARAHRIGQKQEVMVYRFITKKTYEAEMFERATKKLGLDQAIF 1290 >gi|94733808|emb|CAK04334.1| novel protein similar to human chromodomain helicase DNA binding protein 2 (CHD2) [Danio rerio] Length = 1694 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 70/217 (32%), Gaps = 31/217 (14%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----------HDEK 55 R +G + + ++ + N A + + + K Sbjct: 728 LTRNFKALSKGTRGSSSGFLNIVMELKKCCNHAFLIKQPEDGENDAPQEHLQSLVRGGGK 787 Query: 56 IKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQE 103 + L+ ++ K +++ L L R + + Sbjct: 788 LVLLDKLLTRLKDRGNRVLIFSQMVRMLDILADYLSMKRYQFQRLDGSIKGELRKQALDH 847 Query: 104 WNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + G G+NL + +V F W+ + + R + G Sbjct: 848 FNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQARAHRIGQ 901 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 902 KKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRM 938 >gi|73999362|ref|XP_544181.2| PREDICTED: similar to DNA repair and recombination protein RAD54B (RAD54 homolog B) isoform 7 [Canis familiaris] Length = 892 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 73/248 (29%), Gaps = 55/248 (22%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD------ 53 ++ Y K + + +L N KE Sbjct: 537 IELYRKLLNSQAVRFCLQGLLGNSPHLICIGALKKLCNHPCLLFNSIKEKECSSTWDGKE 596 Query: 54 --------------------------EKIKALEVIIEKANA----APIIVAYHFNSDLAR 83 K++ L ++ + +++ ++ L Sbjct: 597 EKSLYEALLDVFPADYNPLMFSEEESGKLQVLLKLLAVIHELRPTEKVVLVSNYTQTLDI 656 Query: 84 -LQKAFPQGRTLDK---------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 + G T + + +N + + G GLNL GG+ Sbjct: 657 LQEVCKRHGYTYTRLDGQTPVSQRQQIVDSFNSKYSSDFIFLLSSKAGGVGLNL-IGGSH 715 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 716 LILYDIDWNPAT-----DIQAMSRVWRDGQKNPVHIYRLLTTGTIEEKIYQRQISKQDLS 770 Query: 192 DLLLNALK 199 +++ + Sbjct: 771 GAVVDLTR 778 >gi|39204553|ref|NP_666091.1| chromodomain-helicase-DNA-binding protein 4 [Mus musculus] gi|51701319|sp|Q6PDQ2|CHD4_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 4; Short=CHD-4 gi|35193271|gb|AAH58578.1| Chromodomain helicase DNA binding protein 4 [Mus musculus] Length = 1915 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 977 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1036 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1037 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1096 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1097 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1150 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1151 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1192 >gi|85090195|ref|XP_958302.1| helicase SWR1 [Neurospora crassa OR74A] gi|74696276|sp|Q7S133|SWR1_NEUCR RecName: Full=Helicase swr-1 gi|28919649|gb|EAA29066.1| helicase SWR1 [Neurospora crassa OR74A] Length = 1845 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 68/183 (37%), Gaps = 35/183 (19%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA 87 + LQ G K++AL+ ++ K ++ L L++ Sbjct: 1498 KRLLQYDCG----------------KLQALDKLLRKLQAGGHRALIFTQMTKVLDILEQF 1541 Query: 88 FPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + +N + +I S G G+NL G + ++F+ Sbjct: 1542 LNIHGHKYLRLDGATKVEQRQILTDRFNHDPRILCFILSTRSGGLGINLT-GADTVIFYD 1600 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ +++ R + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1601 QDWNPA-----MDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1655 Query: 197 ALK 199 + Sbjct: 1656 EGE 1658 >gi|326479756|gb|EGE03766.1| SNF2 family helicase [Trichophyton equinum CBS 127.97] Length = 1050 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%) Query: 53 DEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCT 100 KI+ L ++++ + IV F S L +++ G ++ Sbjct: 809 SAKIRHLMRVLKRESGQFKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASL 868 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N +L + GLNL + +V +W+ +E + R + Sbjct: 869 NRLRNSSGTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEEQAIDRVHRLN 922 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++E +L+ K + + Sbjct: 923 QTIDVKVYKLTIKGTVEERILELQERKRELAKSAIEG 959 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + R L + G+NI + ++ Q N Sbjct: 566 YQRLEQRADRSLERMIGGQNISYAGALVLLLRLRQACNHPDLV 608 >gi|123495365|ref|XP_001326721.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gi|121909640|gb|EAY14498.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] Length = 1587 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 28/229 (12%), Positives = 71/229 (31%), Gaps = 42/229 (18%) Query: 6 KFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVH--------- 52 KFQ+++Y D+ N + ++ ++ + Sbjct: 461 KFQKQIYKDILESNARFLTKGAHCSNIAMELRKVCIHPYLVKGAEERILQDFPGANQNPS 520 Query: 53 ---------DEKIKALEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQG 91 K+ ++ ++ K ++ I++ + Sbjct: 521 ILLQAMIRASGKMILIDKLLPKLKSDGHRILIFSQMTNLLDILEDYLAMKGYQSCRIDGK 580 Query: 92 RTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +K I ++NE + + G G+NL + ++ F W+ + + Sbjct: 581 VKGEKRQGIIDKFNEPNSELFVCLLSTRAGGIGINL-NSADTVIIFDSDWNPQN-----D 634 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G + V VY L+ + T ++ + K + +L+ + Sbjct: 635 LQAQARCHRIGQTKTVQVYRLLTKGTYEQTMFDSASRKLGLGHAILDKM 683 >gi|70993280|ref|XP_751487.1| chromatin remodeling complex subunit (Chd3) [Aspergillus fumigatus Af293] gi|66849121|gb|EAL89449.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus fumigatus Af293] Length = 1509 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 67/198 (33%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDE-------------KIKALEVIIEKANAAPIIVAY 75 ++ + Y E + + K+ + + K +++ Sbjct: 953 LMQLRKCLCHPFVYSEAIEERTANSAASHKHLVEASGKLKLLEIMLPKLKQRGHRVLIFS 1012 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F +L ++ L + I E+N P S G G+ Sbjct: 1013 QFLDNLDIVEDFLDGLGLLHRRLDGRMTSLEKQKRIDEYNADNSPYFAFLLSTRSGGVGI 1072 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + ++R + G K V V+ L+ + +++E ++Q Sbjct: 1073 NL-ATADTVIIMDPDFNPHQDM-----QALSRAHRIGQKNKVLVFQLMTRGSVEEKIMQI 1126 Query: 184 LRTKSTIQDLLLNALKKE 201 + K + +L++ + E Sbjct: 1127 GKKKMVLDHVLIDRMVAE 1144 >gi|315053040|ref|XP_003175894.1| chromodomain helicase hrp3 [Arthroderma gypseum CBS 118893] gi|311341209|gb|EFR00412.1| chromodomain helicase hrp3 [Arthroderma gypseum CBS 118893] Length = 1559 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 74/218 (33%), Gaps = 34/218 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEK 46 ++ Y + Y L G + + ++ + +N + +++ Sbjct: 743 LELYKNILTKNYDALNHGGKGPKPSLLNIMMELKKASNHPFMFWGPEDQAGGSTRREDQL 802 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 K+ L+ ++ K + +++ L L + Sbjct: 803 KALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGFNYQRLDGTIAA 862 Query: 98 ---PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I+ +N + G G+NL + ++ F W+ + + Sbjct: 863 GPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQA 916 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++T++E VL+R R K + Sbjct: 917 MARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLL 954 >gi|73986632|ref|XP_867832.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 20 [Canis familiaris] Length = 1589 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 982 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1041 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1042 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1101 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1102 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1157 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1158 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1206 >gi|119495345|ref|XP_001264459.1| SNF2 family helicase/ATPase PasG, putative [Neosartorya fischeri NRRL 181] gi|119412621|gb|EAW22562.1| SNF2 family helicase/ATPase PasG, putative [Neosartorya fischeri NRRL 181] Length = 867 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 75/217 (34%), Gaps = 28/217 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVH------DEKI 56 + +R L + I + ++ N Y+ + K+ Sbjct: 568 EEIERANTIKLAKKEIAQKKMQNPVMQARLACNSPHNFYWPWSDDPAAIDETLVTASGKM 627 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQE 103 L+ ++ I++ F + L LQ Q + I+ Sbjct: 628 LLLDRLVPCLLKKGHKILIFSQFKTQLDILQDWATQLRGWNCCRIDGAISQTDRQAQIKA 687 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N + + + G G+NL + ++ + W+ ++ + R + G Sbjct: 688 FNSDTGYKIFLLSTRAGGQGINLVA-ADTVILYDSDWNPQQ-----DLQAQDRAHRIGQT 741 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V VY L + T+++ +L++ +K ++ L++ K Sbjct: 742 KPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGK 778 >gi|294951977|ref|XP_002787191.1| hypothetical protein Pmar_PMAR025719 [Perkinsus marinus ATCC 50983] gi|239901899|gb|EER18987.1| hypothetical protein Pmar_PMAR025719 [Perkinsus marinus ATCC 50983] Length = 893 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 68/168 (40%), Gaps = 19/168 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG--------- 91 ++ E K++ L ++ + IV + L ++ + Sbjct: 720 FPDRDMIERDCGKMRKLGELLTTLRDGGHKCIVFTQMSKMLDIIEASMNLHGFTYVRLDG 779 Query: 92 -RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + ++ +N KI A + G G+NL G + ++F+ W+ ++ Sbjct: 780 STPVLRRQLVVEAFNKSPKIFAFIASTRAGGVGINLT-GADCVIFYDSDWNPA-----MD 833 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + R + G R V ++ L++ +TI+E + + K + D++++ Sbjct: 834 RQAMDRCHRIGQTRDVHIFRLLSHHTIEENIFHKQLQKRMLDDVVVDE 881 >gi|261194801|ref|XP_002623805.1| chromodomain helicase [Ajellomyces dermatitidis SLH14081] gi|239588343|gb|EEQ70986.1| chromodomain helicase [Ajellomyces dermatitidis SLH14081] Length = 1513 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--------------EE 45 ++ Y + Y L G + + + ++ + +N + E Sbjct: 713 LEYYKNILTKNYAALNQGSKGQKQSLLNIMMELKKASNHPFMFPNAESRILEGKTGREEM 772 Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 773 MRALITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIA 832 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + + G G+NL + +V F W+ + + Sbjct: 833 AGPRRLSIEHFNAPESNDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 886 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E VL+R R K + Sbjct: 887 AMARAHRIGQTRPVSVYRLVSKDTVEEEVLERARNKLLL 925 >gi|121701939|ref|XP_001269234.1| chromodomain helicase (Chd1), putative [Aspergillus clavatus NRRL 1] gi|119397377|gb|EAW07808.1| chromodomain helicase (Chd1), putative [Aspergillus clavatus NRRL 1] Length = 1506 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y + Y L + + + ++ + +N + + Sbjct: 678 LEYYKNILTKNYAALNDGAKGQKQSLLNIMMELKKASNHPFMFPNAEARILEGSTRREDI 737 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ-KAFPQGRTLDK------ 96 K+ L+ ++ K + +++ L L +G T + Sbjct: 738 LRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYMESRGYTYQRLDGTIP 797 Query: 97 ---DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + +V F W+ + + Sbjct: 798 AVSRRLAIEHFNAPDSSDFCFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 851 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E V++R R K + Sbjct: 852 AMARAHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLL 890 >gi|157108129|ref|XP_001650090.1| helicase [Aedes aegypti] gi|108879397|gb|EAT43622.1| helicase [Aedes aegypti] Length = 1455 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 74/230 (32%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 859 LYKHMQSKGVLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHIGGH 918 Query: 53 -----------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K A+ +++ + ++ Sbjct: 919 GTVSGPDLYRASGKFELLDRILPKLKASGHRVLLFCQMTQCMTIIEDYLSWRGFGYLRLD 978 Query: 91 -GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ ++++N + + + G GLNLQ + +V F W+ + Sbjct: 979 GTTKAEERGDLLKKFNCKNSEYFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1033 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1034 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1082 >gi|73986630|ref|XP_867824.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 19 [Canis familiaris] Length = 1596 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 989 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1048 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1049 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1108 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1109 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1164 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1165 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1213 >gi|149049418|gb|EDM01872.1| chromodomain helicase DNA binding protein 4, isoform CRA_b [Rattus norvegicus] gi|149049420|gb|EDM01874.1| chromodomain helicase DNA binding protein 4, isoform CRA_b [Rattus norvegicus] gi|149049423|gb|EDM01877.1| chromodomain helicase DNA binding protein 4, isoform CRA_b [Rattus norvegicus] Length = 679 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 36 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 95 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 96 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 155 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 156 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 209 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 210 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 251 >gi|241074609|ref|XP_002408725.1| conserved hypothetical protein [Ixodes scapularis] gi|215492547|gb|EEC02188.1| conserved hypothetical protein [Ixodes scapularis] Length = 1216 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 67/241 (27%), Gaps = 58/241 (24%) Query: 2 KQYHK-FQRELYCDLQGENIEAFNSASKTVKCLQLANGA--------------------- 39 K Y + + E ++ + + + ++ + Sbjct: 292 KIYREFLESEEVANIL---MTKKSPLVQLTILKKICDHPRLLSKRACVQMGMYDDMTQDQ 348 Query: 40 ---VYYDEEKHWKEVH----------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARL 84 EE + + K+ + ++ K+ + L + Sbjct: 349 IEEFLDKEEGNSMTISDVPDDTLLAESGKMTFVLELLLNLKSEGHRTLFFSQSRKILDII 408 Query: 85 QK------------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 Q+ + ++D Q + G GL L + + Sbjct: 409 QRILLNRGFRVTRLDGTITKLCERDRLVTQFQTRSLADIFLLTTQVGGVGLTLTS-ADRV 467 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V + W+ + V R + G + V VY L+ +T++E + +R K +I Sbjct: 468 VIYDPSWNPAT-----DAQAVDRAYRIGQSKNVVVYRLVTCSTVEEKIYRRQIFKDSIIK 522 Query: 193 L 193 Sbjct: 523 Q 523 >gi|73997436|ref|XP_867881.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 20 [Canis familiaris] Length = 1850 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 922 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 981 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 982 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1041 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1042 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1095 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1096 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1137 >gi|259485512|tpe|CBF82596.1| TPA: Helicase swr1 (EC 3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5ARK3] [Aspergillus nidulans FGSC A4] Length = 1698 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 66/179 (36%), Gaps = 11/179 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + K + D K +I + V F + Sbjct: 1357 RLSIAFPDKRLLQYDCGKLQRLD----KLLRDLKAGGHRALIFTQMTKMLDVLEQFLNIH 1412 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N I S G G+NL G + ++F+ L W+ Sbjct: 1413 GHRYLRLDGTTKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLT-GADTVIFYDLDWN 1471 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y +++ TI+ +L++ K + D+++ + Sbjct: 1472 PA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQEGE 1525 >gi|300122089|emb|CBK22663.2| unnamed protein product [Blastocystis hominis] Length = 924 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 66/171 (38%), Gaps = 11/171 (6%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 + LQ G + + + + ++ + + + F + Sbjct: 514 KRLLQYDCGKLEVLSAM----LPRLRQEGHRCLLFTQMSRMLDIFETFLNMHHFTYLRMD 569 Query: 90 QGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L + ++++N ++ + S G G+NL G + ++F+ W+ + Sbjct: 570 GSTPLPQRQKMMEKFNNDNQVFVFILSTRSGGLGINL-VGADTVIFYDSDWNPA-----M 623 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G R V +Y L++++T++E +L++ K + L L + Sbjct: 624 DAQAQDRAHRIGQTRDVHIYRLVSESTVEENILKKANQKRHLSQLSLEEGR 674 >gi|300121668|emb|CBK22243.2| unnamed protein product [Blastocystis hominis] Length = 912 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 66/171 (38%), Gaps = 11/171 (6%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 + LQ G + + + + ++ + + + F + Sbjct: 514 KRLLQYDCGKLEVLSAM----LPRLRQEGHRCLLFTQMSRMLDIFETFLNMHHFTYLRMD 569 Query: 90 QGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L + ++++N ++ + S G G+NL G + ++F+ W+ + Sbjct: 570 GSTPLPQRQKMMEKFNNDNQVFVFILSTRSGGLGINL-VGADTVIFYDSDWNPA-----M 623 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G R V +Y L++++T++E +L++ K + L L + Sbjct: 624 DAQAQDRAHRIGQTRDVHIYRLVSESTVEENILKKANQKRHLSQLSLEEGR 674 >gi|147817208|emb|CAN70867.1| hypothetical protein VITISV_027610 [Vitis vinifera] Length = 1177 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 16/134 (11%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ +N+ ++ + G+NL N ++ Sbjct: 976 CWRVYRLDGRTEGSERQKLVERFNDPLNKRVKCTLISTRAGSLGINLHS-ANRVIIVDGS 1034 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ + + R + G + VF Y L+A T++E + +R TK + +++ Sbjct: 1035 WNPT-----YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 1089 Query: 199 -------KKETIHV 205 K+E +H+ Sbjct: 1090 QVHRTISKEEMLHL 1103 >gi|146165350|ref|XP_001014826.2| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|146145551|gb|EAR94494.2| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1612 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 83/225 (36%), Gaps = 34/225 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 +K Y + D + +N F+ + + + N + +K + Sbjct: 930 VKNYDNLK---LLDAKSKNFSKFSLLNILMSLRLVCNHPSLFLYKKKYLIPKKDKFQEEF 986 Query: 53 ---DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 K+K LE +I K +++ F L + + F ++ Sbjct: 987 VDCSNKLKFLERMIPKLLQQNHKMLIFSQFTMMLDIMGEFFNFKGWAFERLDGTTSVIDR 1046 Query: 98 PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 TI +N + K + + G G+NL + + F ++ + ++R Sbjct: 1047 QKTIDSFNSKDSKAKIFLLSTRAGGLGINLTS-ADTIFFTDSDFNP-----YRDVQAISR 1100 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V VY L+++ + +E +++ K ++ +++N + K Sbjct: 1101 AYRMGQESKVKVYRLVSKYSAEERIIEIATRKLLLESIIINPINK 1145 >gi|119495934|ref|XP_001264742.1| chromodomain helicase (Chd1), putative [Neosartorya fischeri NRRL 181] gi|119412904|gb|EAW22845.1| chromodomain helicase (Chd1), putative [Neosartorya fischeri NRRL 181] Length = 1523 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 72/219 (32%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y + Y L + + + ++ + +N + + Sbjct: 691 LEYYKNILTKNYAALNDGAQGQKQSLLNIMMELKKASNHPFMFPNAEAKILEGSTRREDV 750 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 751 LRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYMESRGYSYQRLDGTIP 810 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + ++ F W+ + + Sbjct: 811 AASRRLAIEHFNAPGSSDFCFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQ 864 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E V++R R K + Sbjct: 865 AMARAHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLL 903 >gi|331244822|ref|XP_003335050.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314040|gb|EFP90631.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 958 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 75/207 (36%), Gaps = 33/207 (15%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVIIEK- 65 + + ++ + ++ N +D K K+ L+ +++ Sbjct: 653 KSKADGAENITQEEQLRKVCNHPWLFDWPIDPKTGEQLVGEGLVSASGKMLLLDRLLKGL 712 Query: 66 -ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGK----I 109 ++V F S L +Q + + ++E+NEG+ Sbjct: 713 FDRGHKVLVFSQFTSMLDIIQDWATELKGWRVSRIDGVTRQESRREQMKEFNEGEGPDAC 772 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L + G G+NL + ++ F W+ ++ + R + G + V V+ Sbjct: 773 RLFLLSTRAGGVGINLVA-ADTVILFDSDWNPQQ-----DLQAQDRVHRIGQTKPVLVFR 826 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ NTI+ +L++ K ++ L++ Sbjct: 827 FVSGNTIESKMLEKAGQKRKLETLVIG 853 >gi|116181940|ref|XP_001220819.1| hypothetical protein CHGG_01598 [Chaetomium globosum CBS 148.51] gi|88185895|gb|EAQ93363.1| hypothetical protein CHGG_01598 [Chaetomium globosum CBS 148.51] Length = 843 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 78/230 (33%), Gaps = 37/230 (16%) Query: 7 FQRELYCDLQGENIEAF-NSASKTV--KCLQLANGA--VYYDEEKHWKEVHDEKIKALEV 61 +R +L+ ++ N + + + K+KAL Sbjct: 611 MKRVSQAELKQPKLDHLTNELKALSDFELHLWCRDYKCIKGYDLPDDSWTDCAKVKALLE 670 Query: 62 II--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGK 108 ++ +AN +V F + L + I E+N + Sbjct: 671 LVRKYQANGDRALVFTRFAKVIEILGECLASEGIEYLSLQGNTDVSARQELINEFNADES 730 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 IP+ S G G+NL N ++ F + ++ + R + G R V + Sbjct: 731 IPVFLLTTGSGGTGINLTA-ANKVIIFDQSDNPQD-----DIQAENRAHRLGQTRPVEII 784 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL-------------NALKKETIHV 205 LI++ T++ELV + K + + ++ +A+K + + + Sbjct: 785 RLISEGTVEELVYKACEKKLELANKVVGWSTVEMTSGEMESAVKSQLLQL 834 >gi|302821505|ref|XP_002992415.1| hypothetical protein SELMODRAFT_162307 [Selaginella moellendorffii] gi|300139831|gb|EFJ06565.1| hypothetical protein SELMODRAFT_162307 [Selaginella moellendorffii] Length = 1016 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 79/223 (35%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYY--------DEEKHWKE 50 + QR Y L ++I+A N+ + ++ + N + Sbjct: 377 QMQRNYYKALLQKDIDAINTGGERRRLLNIAMQLRKCCNHPYLFQGAEPGPPYFTGEHLV 436 Query: 51 VHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + K+ L+ ++ K +++ L L+ G + + Sbjct: 437 ENSGKMVLLDKLLPKLKQRSSRVLIFSQMTRLLDILEDYCIFRGYPSCRIDGGTSGEDRE 496 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + + G G+NL +I++ + W+ + ++ R Sbjct: 497 FAIEAFNREGSEKFIFLLSTRAGGLGINL-ATADIVILYDSDWNPQ-----VDLQAQDRA 550 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ Q TI+E V++R K + L++ + Sbjct: 551 HRIGQKKEVQVFRFCTQYTIEEKVIERAYKKLALDALVIQQGR 593 >gi|189241668|ref|XP_967398.2| PREDICTED: similar to brahma CG5942-PA, partial [Tribolium castaneum] Length = 1402 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 69/231 (29%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 840 LYKHMQSKGVLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQNIEEKYCDHVGIS 899 Query: 53 ------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K +++ + ++ Sbjct: 900 GGVISGPDLYRASGKFELLDRILPKLKVTGHRVLLFCQMTQLMTIMEDYLSWRGFGYLRL 959 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++N + G GLNLQ + ++ F W+ + Sbjct: 960 DGTTKAEDRGDLLKKFNAKNSDYFLFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1015 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1016 --DLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1064 >gi|66359910|ref|XP_627133.1| brahma like protein with a HSA domain, SNF2 like helicase and a bromo domain [Cryptosporidium parvum Iowa II] gi|46228555|gb|EAK89425.1| brahma like protein with a HSA domain, SNF2 like helicase and a bromo domain [Cryptosporidium parvum Iowa II] Length = 1673 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 71/210 (33%), Gaps = 28/210 (13%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD-----EKIKALEV 61 Q+ LY +L+ N ++ ++ N + E + K L+ Sbjct: 1010 LQQYLYKELESNENSGPNVL---MQLRKVCNHPFLFSTEIQYPSDESIVRVCGKFVMLDS 1066 Query: 62 IIEK--ANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 I+ K A +++ F S + +++ +N Sbjct: 1067 ILPKLRAAGHRVLIFSQMTKLLTLLEVFLSLRNMPFLRLDGTTLSEDRQESLKLFNAENS 1126 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P + + G G+NLQ + ++ F W+ + + +R + G K+ V Sbjct: 1127 PYFVFLLSTKAGGFGINLQS-ADTVILFDSDWNPQN-----DEQAQSRAHRIGQKKEVLT 1180 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +T++E ++ K L++ + Sbjct: 1181 LRFVTPDTVEERIMTTAGIKLDKDALIIKS 1210 >gi|251773066|gb|EES53622.1| DNA/RNA helicase, SNF2 family [Leptospirillum ferrodiazotrophum] Length = 824 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 75/188 (39%), Gaps = 18/188 (9%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 + +++ +++ + Y + + V +++ AL + +V + + Sbjct: 498 LTCSLQNMRMVCNSTYLIDPETDHGVKADELVALLDGLFSDPGTKAVVFSQWTRTHDIVI 557 Query: 86 KA----------FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + F G D+ P ++ + + + + GLNLQ+ ++LV Sbjct: 558 RRLDARGIGSVSFHGGIPSDRRPALVERFREDPDCRVFL-STDAGSTGLNLQH-ASVLVN 615 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 L W+ +Q I RI + G KR V + +A+ I+E +L L K ++ + + Sbjct: 616 MDLPWNPAILEQRIARI-----HRMGQKRPVQIVNFVAKGGIEEGMLGLLSFKQSLSEGI 670 Query: 195 LNALKKET 202 L+ E Sbjct: 671 LDGGAGEI 678 >gi|738309|prf||1924378A nucler protein GRB1 Length = 1613 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 71/231 (30%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1005 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1064 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ Sbjct: 1065 GGIVQGLDMYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYLAYRGFKYLRL 1124 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1125 AGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1180 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1181 --DLQAQDRAHRIGQRNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1229 >gi|196012568|ref|XP_002116146.1| hypothetical protein TRIADDRAFT_30634 [Trichoplax adhaerens] gi|190581101|gb|EDV21179.1| hypothetical protein TRIADDRAFT_30634 [Trichoplax adhaerens] Length = 701 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 68/233 (29%), Gaps = 42/233 (18%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + L N + ++ + N + + Sbjct: 222 KFYRAILERNFNFLSKGANTSNLPNLMNTMMELRKCCNHPFLINGAEEKIVGEFTANNQV 281 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ R + Sbjct: 282 NGINAAIHAMIQASGKLVLIDKLLPKLKDGGHKVLIFSQMVRCLDILEDYLVYRRYQYER 341 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + + G G+NL + +V F W+ + Sbjct: 342 IDGRVRGNLRQAAIDRFCKPESDRFVFLLCTRAGGLGINLTA-ADTVVIFDSDWNPQN-- 398 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + R + G +AV VY LI QN+ + + R K + +L ++ Sbjct: 399 ---DLQAQARCHRIGQSKAVKVYRLITQNSYEREMFDRASLKLGLDRAVLQSM 448 >gi|119492467|ref|XP_001263599.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] gi|119411759|gb|EAW21702.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] Length = 1133 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 22/179 (12%) Query: 32 CLQLA-NGAVYYDEE--KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN-------- 78 C QL N + K+ + ++ K+ L ++ + N +V F Sbjct: 925 CHQLCLNHPHSLGKFALKNDEWMNSGKVDKLCELLKRFQENGDRTLVFSQFTLVMDILEH 984 Query: 79 --SDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFF 135 L ++ + ++E IP+ + G G+NL N +V F Sbjct: 985 VLETLHLGFVRLDGRTNVEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVVIF 1043 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ + + R + G R V V L+ ++TI+E + +TK + + Sbjct: 1044 DSSFNPQ-----EDVQAENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAV 1097 >gi|50311185|ref|XP_455616.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644752|emb|CAG98324.1| KLLA0F11814p [Kluyveromyces lactis] Length = 931 Score = 91.3 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 74/211 (35%), Gaps = 33/211 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-------------VHDEKIKALE 60 L N+ +S ++ N + +++E K++ L Sbjct: 582 QLNFSNMTFNSSLGLITLFKKICNSTRLIKTDPYYEERLSQVQTSSTSGKFTSGKLRILL 641 Query: 61 VIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNE 106 ++ + ++V ++ L ++ T +D N+ Sbjct: 642 SLLHELKTKTDEKVVVISNYTQTLDIIEGHCSSEGYTSARLDGSTATKTRDQIVTSFNND 701 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I + S G GLNL G + LV F W+ I+ ++R + G +R F Sbjct: 702 PSIFVFLLSAKSGGVGLNL-IGASRLVLFDNDWNPS-----IDLQAMSRIHRDGQRRPCF 755 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y L+ IDE +LQR K + L++ Sbjct: 756 IYRLVTTGCIDEKILQRQLMKIALSKKFLDS 786 >gi|302804676|ref|XP_002984090.1| hypothetical protein SELMODRAFT_119222 [Selaginella moellendorffii] gi|300148442|gb|EFJ15102.1| hypothetical protein SELMODRAFT_119222 [Selaginella moellendorffii] Length = 561 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 64/182 (35%), Gaps = 23/182 (12%) Query: 32 CLQLANGA---VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK 86 +L + + + + K + L ++ ++ + L L+ Sbjct: 362 LHKLCCTHGMLASHSKLRDKDALESAKCQLLVKLLPHLQSAGHRPLIFSQWTGMLDILEW 421 Query: 87 AFPQGRTLDKD----------PCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + ++N+ I + G GLNL G + ++ Sbjct: 422 VLQVMNLSYRRLDGSTQVCERQSLVDDFNKELDIFAFLLSTRAGGQGLNLT-GADTVIIH 480 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ + ++R R + G ++V VY L+ ++T+DE + + K + D +L Sbjct: 481 DVDFNPQ-----MDRQAEDRCHRIGQSKSVTVYRLVTKSTVDENIYGIAQRKLVL-DAVL 534 Query: 196 NA 197 Sbjct: 535 EG 536 >gi|40215423|gb|AAR82736.1| SD21488p [Drosophila melanogaster] Length = 1645 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 71/225 (31%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------EEKH 47 KQY+K + +G+ + ++ + N A E Sbjct: 770 KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQ 829 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L + + Sbjct: 830 TLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGE 889 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 890 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 943 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 944 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 988 >gi|322711118|gb|EFZ02692.1| SNF2 family helicase/ATPase, putative [Metarhizium anisopliae ARSEF 23] Length = 1235 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 19/173 (10%) Query: 46 KHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKA----------FPQGRTL 94 K + + KI+ + I+ +A IV F S L ++ + Sbjct: 1014 KQTQVLASAKIREVTKILHAEAEEHKFIVFSQFTSMLDLVEPFLDKDGFEYARYDGSMKN 1073 Query: 95 DKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D +++ + +L GLNL ++ +W+ +E + Sbjct: 1074 DDREESLRRLREDQSTRVLLCSLKCGSLGLNLTA-ATRVIIVEPFWNP-----FVEEQAI 1127 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-KKETIHV 205 R + V VY L +T++E ++ K + + + KKE + + Sbjct: 1128 DRVHRLTQTVDVVVYKLTVADTVEERIIDLQNKKRELAEQTIEGGAKKEAMKL 1180 Score = 40.9 bits (94), Expect = 0.094, Method: Composition-based stats. Identities = 5/44 (11%), Positives = 14/44 (31%), Gaps = 3/44 (6%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 K Y + + + + + N+ + ++ Q N Sbjct: 697 KFYDRLEARADKSMEMMMQNKLSYANAFTLLLRLRQACNHPKLV 740 >gi|295666383|ref|XP_002793742.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb01] gi|226278036|gb|EEH33602.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb01] Length = 1240 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 60/171 (35%), Gaps = 26/171 (15%) Query: 53 DEKIKALEVIIEKANAA---------PIIVAYHFNSDLAR-----------LQKAFPQGR 92 KI+ I+ + I+ F S L ++ Sbjct: 1059 SAKIEKTMEILHDIQSRIPTGDDKPEKTIIFSQFTSLLDLLEVPILRKGWGYRRYDGSMN 1118 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ ++ + ++ + GLNL + ++ F +W+ IE Sbjct: 1119 PNQRNEAVMKFTDSKDCTIMLVSLKAGNAGLNLVA-ASQVIIFDPFWNP-----YIEEQA 1172 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R + G R V V+ ++ +NT+++ +L K T+ + L+ + I Sbjct: 1173 IDRAHRIGQVRPVVVHRILVKNTVEDRILDLQEKKRTLIEGALDEGASQRI 1223 >gi|195442878|ref|XP_002069173.1| GK23635 [Drosophila willistoni] gi|194165258|gb|EDW80159.1| GK23635 [Drosophila willistoni] Length = 1720 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1095 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGH 1154 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1155 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLD 1214 Query: 91 -GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N + + G GLNLQ + +V F W+ + Sbjct: 1215 GTTKAEDRGELLRKFNAKGSDYFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1269 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1270 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1318 >gi|302842935|ref|XP_002953010.1| hypothetical protein VOLCADRAFT_30242 [Volvox carteri f. nagariensis] gi|300261721|gb|EFJ45932.1| hypothetical protein VOLCADRAFT_30242 [Volvox carteri f. nagariensis] Length = 791 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 64/202 (31%), Gaps = 37/202 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEV-----------------HDEKIKALEVIIEK--ANA 68 ++ + N + H K++ ++ + + Sbjct: 564 LMMELRKACNHPFLVAHQAGRGGAGRGGRGRHPTDLDSLVTHSGKLQLVDKMAMRLRDAG 623 Query: 69 APIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWNEGK--IPLLFAHP 116 +I+ F L L++ + I +N+ Sbjct: 624 HRLIIFSQFTRTLDLLEEWLVGRGLGYMRIDGTVAGSERQKRIDRFNQHPDSYFCFLLST 683 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + R + G + V +Y L+ + TI Sbjct: 684 RAGGLGINL-ATADTVIIFDSDWNP-----HNDLQAQARAHRLGQDKPVMIYRLVTRQTI 737 Query: 177 DELVLQRLRTKSTIQDLLLNAL 198 +E ++Q R K ++ L++ + Sbjct: 738 EERMMQVSRKKMMLEHLVVRKM 759 >gi|325188110|emb|CCA22651.1| chromodomainhelicaseDNAbinding protein putative [Albugo laibachii Nc14] Length = 1883 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 27/228 (11%), Positives = 66/228 (28%), Gaps = 38/228 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y + L ++ Q N + + Sbjct: 1141 QYYRAIYDKNQSFLYRGIQNGLPRLVNIQLQLRQCCNHPFLIKGVEDRELQDLGPEPTMD 1200 Query: 53 ---------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 K + ++ K +++ F L L++ + Sbjct: 1201 RIMDKTIQCSGKFVLVSKLLPKLKREGRKVLIFSQFLKQLDLLERYCEYHGFGYERLDGS 1260 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +I ++ + + G G+NL + +V F W+ + + Sbjct: 1261 TNGAARQASIDRFSRPNAKSFVFLLSTKAGGVGINL-IAADTVVIFDSDWNPQN-----D 1314 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + G + V +Y L+ +NT + + +R K ++ +L + Sbjct: 1315 LQAQSRCHRIGQSKTVQIYRLVTRNTYESEMFERASQKLGLEHAVLGS 1362 >gi|255715511|ref|XP_002554037.1| KLTH0E12870p [Lachancea thermotolerans] gi|238935419|emb|CAR23600.1| KLTH0E12870p [Lachancea thermotolerans] Length = 1880 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 75/254 (29%), Gaps = 65/254 (25%) Query: 2 KQYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWK------ 49 + Y F ++ +++ + + +L N + H + Sbjct: 1552 QLYKDFAKKQKNNVEQDIENVSEVDNKQHIFQALQYMRKLCNHPSLVVSKDHPQWSQVQD 1611 Query: 50 -----------EVHDEKIKALEVIIEKA----------------------NAAPIIVAYH 76 H K+ AL+ ++ + + ++ Sbjct: 1612 YLKQTGFSLHDITHAPKLGALKNLLLECGIGIQDVDKKSKTYLPSTESVISQHRALIFCQ 1671 Query: 77 FNSDLAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 L ++++N + I L G G Sbjct: 1672 LKDMLDMVENDLFKKYMPSVTYMRLDGSVESRDRQAVVRKFNEDPSIDCLLLTTKVGGLG 1731 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL G + ++F W+ M + + R + G K+ V VY +I + T++E ++ Sbjct: 1732 LNLT-GADTVIFIEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRIITRGTLEEKIMG 1785 Query: 183 RLRTKSTIQDLLLN 196 + K I ++N Sbjct: 1786 LQKFKMNIASTVIN 1799 >gi|73986634|ref|XP_867838.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 21 [Canis familiaris] Length = 1605 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 998 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1057 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1058 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1117 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1118 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1173 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1174 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1222 >gi|308493124|ref|XP_003108752.1| hypothetical protein CRE_11128 [Caenorhabditis remanei] gi|308248492|gb|EFO92444.1| hypothetical protein CRE_11128 [Caenorhabditis remanei] Length = 1496 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 74/225 (32%), Gaps = 35/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------- 53 Y ++ L D + A + ++ V +L N + + H Sbjct: 788 IYRHMKKGLLLD-AKMSSGARSLSNTIVHLRKLCNHPFLFQNIEDSCRAHWKVNEVSGKD 846 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ I+ K +++ + + + D+ Sbjct: 847 LMRVAGKLELLDRILPKLKATGHRVLMFFQMTKMMDIFEDFLHFRNYTYLRLDGSTKPDE 906 Query: 97 DPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G GLNLQ + ++ F W+ + Sbjct: 907 RGDLLSLYNAPDSEYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQD 960 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 961 RAHRIGQKKEVRVLRLITANSVEEKMLAVARYKLNVDEKVIQAGK 1005 >gi|301106883|ref|XP_002902524.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262098398|gb|EEY56450.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 1449 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 66/217 (30%), Gaps = 50/217 (23%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEV------------HDEKIKALEVIIEKANA--- 68 N + ++ ++ + + K+ L ++ + Sbjct: 1159 NVLTNLQLLRKICVHPALVADDAVTRGLTLKEKRALVDWKSSGKMTGLHDLLVECCDFAA 1218 Query: 69 ----------------APIIVAYHFNSDLARLQKAFPQG------------RTLDKDPCT 100 +V H L ++ K Sbjct: 1219 RDQSSASGDDDTSFSPHRCLVFAHLQKTLDLTEQMLENALPGVTYRRLDGRTPHTKRADI 1278 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +Q++N + I +L + G GL L G + ++F W+ ++ + R + Sbjct: 1279 VQQFNADPSIDVLLLTTSVGGLGLTLT-GADTVIFLEHSWNP-----FVDLQAMDRAHRI 1332 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G KR V V+ LI + +++E ++ K + ++ Sbjct: 1333 GQKRTVRVFRLIMERSLEEHIVNLQEFKEQVAATVVQ 1369 >gi|67481787|ref|XP_656243.1| SNF2 family protein [Entamoeba histolytica HM-1:IMSS] gi|56473432|gb|EAL50858.1| SNF2 family protein [Entamoeba histolytica HM-1:IMSS] Length = 1527 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 75/190 (39%), Gaps = 22/190 (11%) Query: 10 ELYCDLQGENIEAFN---SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 + Y +G+ I+ + L++ N + +H + + LE+I ++ Sbjct: 1289 DAYLKQEGKTIDDITNSPKLMALAELLEMCN---IGKDGEHRVLIFAQMNITLELIEKQL 1345 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNL 125 A ++ D +K + ++ N+ I +L G GLNL Sbjct: 1346 FAKQFPYISYYRLD---------GSVPQNKRTEIVDKFKNDPTIDVLLLTTRVGGLGLNL 1396 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 +I++F W+ + + + R + G + V VY LI + T++E ++ + Sbjct: 1397 TA-ADIVIFMEHDWNPTK-----DLQAMDRAHRLGQNKVVNVYRLIVRQTLEERIMNLQQ 1450 Query: 186 TKSTIQDLLL 195 K+ I + ++ Sbjct: 1451 FKTKIANTVV 1460 >gi|296226943|ref|XP_002759149.1| PREDICTED: DNA repair and recombination protein RAD54B [Callithrix jacchus] Length = 910 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 75/249 (30%), Gaps = 57/249 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 ++ Y K LQG + + +L N KE K Sbjct: 557 IELYRKLLNSQVVRFCLQGLLENSPH-LICIGALKKLCNHPCLLFNSIKEKECSSTCDKN 615 Query: 59 LEVIIEK------------------------------------ANAAPIIVAYHFNSDLA 82 E + K +++ ++ L Sbjct: 616 EEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTERVVLVSNYTQTLN 675 Query: 83 RLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGN 130 LQ+ + + + + +N + + G GLNL GG+ Sbjct: 676 ILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNL-IGGS 734 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 735 HLILYDIDWNPAT-----DIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGL 789 Query: 191 QDLLLNALK 199 +++ K Sbjct: 790 CGAVVDLTK 798 >gi|119570411|gb|EAW50026.1| helicase, lymphoid-specific, isoform CRA_a [Homo sapiens] Length = 870 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 65/192 (33%), Gaps = 30/192 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEK---ANAAPIIVAY 75 + + N + + K L+ ++ + +++ Sbjct: 564 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVVLLFS 623 Query: 76 HFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 S L L + + + +N + ++ + + G G+N Sbjct: 624 QMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGIN 683 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++ + W+ + + R + G + V VY L+ NTID+ +++R Sbjct: 684 LTA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERA 737 Query: 185 RTKSTIQDLLLN 196 K ++ L+++ Sbjct: 738 AAKRKLEKLIIH 749 >gi|238487276|ref|XP_002374876.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus flavus NRRL3357] gi|220699755|gb|EED56094.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus flavus NRRL3357] Length = 1172 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 19/177 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR-----------LQK 86 Y V KI+ I+ + I+ F S L ++ Sbjct: 987 RKYLRRLEKTWVSSAKIEKAMDILRGIQEGEEKTIIFSQFTSLLDLLEVPIVRQGWGYRR 1046 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + D++ + + ++ + GLNL + ++ F +W+ Sbjct: 1047 YDGSMKPGDRNSAVLDFTDSPDCKIMLVSLKAGNSGLNLVA-ASQVIIFDPFWNP----- 1100 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 IE + R + G R V ++ ++ QNT+++ +L+ K + + L+ + I Sbjct: 1101 YIEEQAIDRAHRIGQVREVQIHRILVQNTVEDRILELQDKKRELIEGALDENASKNI 1157 Score = 38.6 bits (88), Expect = 0.55, Method: Composition-based stats. Identities = 4/51 (7%), Positives = 12/51 (23%), Gaps = 6/51 (11%) Query: 1 MKQYHKFQRELYCD----LQGENI--EAFNSASKTVKCLQLANGAVYYDEE 45 ++ Y + L+ + N ++ Q + Sbjct: 751 LELYSSLEARTQLQFNRYLEAGTVGRNYSNILVLLLRLRQACCHPHLITDF 801 >gi|126313541|ref|XP_001362697.1| PREDICTED: similar to transcription termination factor, RNA polymerase II [Monodelphis domestica] Length = 1151 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 28/243 (11%), Positives = 67/243 (27%), Gaps = 67/243 (27%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD---------------------- 53 + + S ++ Q E++ Sbjct: 896 DSQGSSTVHILSLLLRLRQCCCHLSLLKSTLDQAELNSEGLFLSLEEQLNALTLSELHNP 955 Query: 54 --------------------------EKIKALEVIIEKANAA-PIIVAYHFNSDLARLQK 86 + A +I+K + ++ + L + Sbjct: 956 DSATVYLNGTQFKMELFEDTRESTKISSLLAELELIQKNSEFQKSVIVSQWTCMLKIVAM 1015 Query: 87 AFPQ----------GRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVF 134 + + ++ +N ++ + G GL+L GGN L Sbjct: 1016 HLQRRGLTYAVIDGSVNPKQRMDLVEAFNNSCRGPQVMLISLLAGGVGLSLT-GGNHLFL 1074 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ Q +RI + G K+ V ++ + ++T++E + R K + + Sbjct: 1075 LDMHWNPALEDQACDRI-----YRVGQKKDVVIHRFVCEDTVEEKISHLQRRKKDLASQV 1129 Query: 195 LNA 197 L+ Sbjct: 1130 LSG 1132 >gi|73997416|ref|XP_867808.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 10 [Canis familiaris] Length = 1842 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 922 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 981 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 982 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1041 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1042 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1095 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1096 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1137 >gi|46137317|ref|XP_390350.1| hypothetical protein FG10174.1 [Gibberella zeae PH-1] Length = 1588 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 74/215 (34%), Gaps = 33/215 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVI 62 + + + N + ++ + Y E + K+ L+V+ Sbjct: 1038 KMNKKERGSLN--NILMQLRKCLCHPFMYSEAIEERHHDPTVLQRNLVEASAKLLLLQVM 1095 Query: 63 IEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIP 110 + K +++ F L ++ + I +N + P Sbjct: 1096 LPKLQERGHRVLIFSQFLQQLDIIEDFLSGLGYDYRRLDGSIGSLEKQRRIDAFNAPESP 1155 Query: 111 LL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NL + ++ ++ + + ++R + G K+ V + Sbjct: 1156 VFAFLLSTRAGGVGINL-ATADTVIILDPDFNPHQ-----DIQALSRAHRIGQKKKVLCF 1209 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L+ ++++E ++Q + K + L+ ++ + + Sbjct: 1210 QLMTIDSVEERIMQIGKKKMALDHALIESMDDDEL 1244 >gi|301773764|ref|XP_002922290.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 4-like [Ailuropoda melanoleuca] Length = 1906 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 978 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1037 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1038 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1097 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1098 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1151 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1152 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1193 >gi|327302542|ref|XP_003235963.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] gi|326461305|gb|EGD86758.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] Length = 1053 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%) Query: 53 DEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCT 100 KI+ L ++++ + IV F S L +++ G ++ Sbjct: 813 SAKIRHLMRVLKRESGQFKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASL 872 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N +L + GLNL + +V +W+ +E + R + Sbjct: 873 NRLRNSSGTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEEQAIDRVHRLN 926 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++E +L+ K + + Sbjct: 927 QTVDVKVYKLTIKGTVEERILELQERKRELAKSTIEG 963 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + R L + G+NI + ++ Q N Sbjct: 565 YQRLEQRADRSLERMIGGQNISYAGALVLLLRLRQACNHPDLV 607 >gi|302663877|ref|XP_003023576.1| hypothetical protein TRV_02323 [Trichophyton verrucosum HKI 0517] gi|291187579|gb|EFE42958.1| hypothetical protein TRV_02323 [Trichophyton verrucosum HKI 0517] Length = 1054 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%) Query: 53 DEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCT 100 KI+ L ++++ + IV F S L +++ G ++ Sbjct: 813 SAKIRHLMRVLKRESGQFKFIVFSVFTSMLDKIEPFLKNGGIGYARYDGGMRNDLREASL 872 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N +L + GLNL + +V +W+ +E + R + Sbjct: 873 NRLRNSSGTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEEQAIDRVHRLN 926 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++E +L+ K + + Sbjct: 927 QTVDVKVYKLTIKGTVEERILELQERKRELAKSTIEG 963 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + R L + G+NI + ++ Q N Sbjct: 565 YQRLEQRADRSLERMIGGQNISYAGALVLLLRLRQACNHPDLV 607 >gi|73997432|ref|XP_867867.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 18 [Canis familiaris] Length = 1760 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 977 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1036 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1037 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1096 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1097 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1150 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1151 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1192 >gi|299751759|ref|XP_002911684.1| RAD54B protein [Coprinopsis cinerea okayama7#130] gi|298409521|gb|EFI28190.1| RAD54B protein [Coprinopsis cinerea okayama7#130] Length = 1055 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 19/155 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN 105 + + I +V HF S L L+ Q K + +N Sbjct: 721 LAKMLKDIRNNTEEKCVVVSHFTSTLNILEAFCQQAGYSFYRLDGQTPQQKRQEYVNAFN 780 Query: 106 EGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + G G+NL GG+ L W+ + + R + G K Sbjct: 781 KSSQRGGFVFLLSSKAGGVGINL-IGGSRLFLIDSDWNPSH-----DLQAMARCHRDGQK 834 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R VF+Y L+ TIDE + QR TK + L+ + Sbjct: 835 RPVFIYRLVTAGTIDEKIFQRQITKLGLSASLIGS 869 >gi|114643075|ref|XP_001162434.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 1921 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 965 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1024 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1025 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1084 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1085 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1138 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1139 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1180 >gi|157108127|ref|XP_001650089.1| helicase [Aedes aegypti] gi|108879396|gb|EAT43621.1| helicase [Aedes aegypti] Length = 1433 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 74/230 (32%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 859 LYKHMQSKGVLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHIGGH 918 Query: 53 -----------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K A+ +++ + ++ Sbjct: 919 GTVSGPDLYRASGKFELLDRILPKLKASGHRVLLFCQMTQCMTIIEDYLSWRGFGYLRLD 978 Query: 91 -GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ ++++N + + + G GLNLQ + +V F W+ + Sbjct: 979 GTTKAEERGDLLKKFNCKNSEYFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1033 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1034 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1082 >gi|134110664|ref|XP_776159.1| hypothetical protein CNBD2060 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258827|gb|EAL21512.1| hypothetical protein CNBD2060 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1123 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 74/204 (36%), Gaps = 29/204 (14%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEK--ANA 68 A + + ++ ++ E ++ K++ L++++ K A Sbjct: 7 AKSVRNILMELRKVCQHPYLSAPELEIFDLPLEEQHRQLLNASGKLQFLKLLLPKLIARG 66 Query: 69 APIIVAYHFNSDLAR--------LQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPAS 118 I++ F L R + + ++N + + Sbjct: 67 HRILLFSQFKMALDRNFLYGENVKHLRLDGDTQQAQRQKYMDQFNAPNSDYHIFLLTTRA 126 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL + ++ ++ + Q + R + G ++ V V+ L+ + +++E Sbjct: 127 GGVGINL-ASADTVILHDPDFNPHQDQ-----QAIARAYRYGQEKRVLVFKLMIKGSVEE 180 Query: 179 LVLQRLRTKSTIQDLLLNALKKET 202 ++ + + K + L++ + KET Sbjct: 181 TIINKGKRKMVLDHLVVQQMGKET 204 >gi|255954897|ref|XP_002568201.1| Pc21g11700 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589912|emb|CAP96067.1| Pc21g11700 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1671 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 68/179 (37%), Gaps = 11/179 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + K + D K +I + + F + Sbjct: 1352 RLSIAFPDKRLLQYDCGKLQRLD----KLLRDLKAGGHRALIFTQMTKMLDILEQFLNIH 1407 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ + +N + +I S G G+NL G + ++F+ L W+ Sbjct: 1408 GHRYLRLDGTTKVESRQMLTERFNSDPRILAFILSSRSGGLGINLT-GADTVIFYDLDWN 1466 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y +++ TI+ +L++ K + D+++ + Sbjct: 1467 PA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVIIQEGE 1520 >gi|195496271|ref|XP_002095622.1| GE19602 [Drosophila yakuba] gi|194181723|gb|EDW95334.1| GE19602 [Drosophila yakuba] Length = 899 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 70/222 (31%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 K Y + + L + + + + N + + Sbjct: 521 KFYKLILTKNFKALNKNGGGRVCSLLNIMMDLRKCCNHPYLFSSAAEEATILPSGLYEIN 580 Query: 52 ----HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L ++++ A+ +++ L L+ + Sbjct: 581 SLIKASGKLDLLSKMLKQLKADHHRVLIFSQMTKMLNILEDFLEGEGYQYERLDGNIRGD 640 Query: 98 --PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N K + + G G+NL + ++ F W+ + Sbjct: 641 LRQEAIDRFNAPKAEQFVFLLSTRAGGLGINL-ATADTVILFDSDWNP-----HNDVQAF 694 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + N+++E ++Q ++ K + L++ Sbjct: 695 SRAHRMGQTKKVMIYRFVTHNSVEERIMQVVKHKMMLTHLVV 736 >gi|169598354|ref|XP_001792600.1| hypothetical protein SNOG_01979 [Phaeosphaeria nodorum SN15] gi|160704380|gb|EAT90191.2| hypothetical protein SNOG_01979 [Phaeosphaeria nodorum SN15] Length = 1307 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 69/209 (33%), Gaps = 43/209 (20%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI---------------------- 62 + + ++ N K + E ++AL + Sbjct: 546 ALQLIMVLKKVCNSPSLIKTTKDGEATPSEMLQALLPLVPPHVLNSHASSTKLRLLDSLV 605 Query: 63 --IEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGK-- 108 I I++ ++ + L +++ +K ++++N+ Sbjct: 606 HRIHTTTEEKIVIVSNYTTTLDMIERMLVSLSYTYLRLDGSTPSNKRQALVEKFNKTPKA 665 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 S G GLNL G + +V F + W+ + + R + G K V + Sbjct: 666 ASFAFLLSAKSGGVGLNL-IGASRIVLFDIDWNPAT-----DLQAMARIHRDGQKLPVKI 719 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y + + IDE + QR K + + +++ Sbjct: 720 YRFLVKGGIDEKIYQRQVMKMGLANAVVD 748 >gi|291388286|ref|XP_002710621.1| PREDICTED: RAD54 homolog B [Oryctolagus cuniculus] Length = 911 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 73/248 (29%), Gaps = 55/248 (22%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 ++ Y K + E+ +L N KE + Sbjct: 556 IELYRKLLNSQAVRFCLQGLSESSPHLLCIGALKKLCNHPCLLFSTAKEKESSSSCNEDE 615 Query: 60 EVIIEK------------------------------------ANAAPIIVAYHFNSDLAR 83 E + K +++ ++ L Sbjct: 616 ERSLYKGLLNVFPADYNPLLFTEEESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 675 Query: 84 LQKAFPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 LQ+ + + + + +N + + G GLNL GG+ Sbjct: 676 LQEVCKRHGYAHTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNL-IGGSH 734 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 735 LILYDIDWNPAT-----DIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLS 789 Query: 192 DLLLNALK 199 +++ K Sbjct: 790 GAVVDLSK 797 >gi|269975285|gb|ACZ55509.1| helicase [Staphylococcus phage SA1] Length = 491 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 75/234 (32%), Positives = 108/234 (46%), Gaps = 40/234 (17%) Query: 4 YHKFQRELYCDLQGEN----------IEAFNSASKTVKCLQLANGAVY------------ 41 Y + E ++ E+ IEA +AS K LQ+ +G +Y Sbjct: 247 YRMMEEESLVEIMPEDFDEHLDDPIVIEAEQAASLQSKLLQMCSGFIYDTKIVGITEDDK 306 Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPI-IVAYHFNSDLARLQKAFPQGRTLDKDPCT 100 ++K +HD K ALE ++E A ++AYHF L RL++ F +D D Sbjct: 307 VIKQKDTYRLHDLKFDALEELLETTLADKNVLIAYHFKPTLERLKERFKDLVVMDDDGKC 366 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I++WN GKI LL AHP S GHGLNLQ+GG+++V+ W LE Q R+ + G Sbjct: 367 IKKWNAGKIRLLAAHPQSAGHGLNLQHGGHVIVYIDNPWSLERFLQFNGRL-----HRQG 421 Query: 161 FKRAVFVYYLIA---------QNTIDELVLQRLRTKSTIQD---LLLNALKKET 202 K V +Y A T D++V+Q L K +QD LL +K Sbjct: 422 QKFPVTIYQFKAMLRTPNGLLAETADDVVIQALVEKEDVQDAFFALLERIKGRI 475 >gi|134079366|emb|CAK96995.1| unnamed protein product [Aspergillus niger] Length = 910 Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 18/165 (10%) Query: 45 EKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ-----------GR 92 + K + KI+ L I+ +++ IV F S L +++ + R Sbjct: 665 DDDNKILPSTKIRRLMKILRRESSDHKFIVFSVFTSMLDKIEPFLKRTGIGYARYDGGMR 724 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + N +L + GLNL + +V +W+ +E Sbjct: 725 NDHREASLNKLRNNSGTRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FVEEQA 778 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + V +Y +I + T++E ++ K + ++ + Sbjct: 779 IDRVHRLNQTVDVKIYKMIIKGTVEERIIDLQDRKRELANVTIEG 823 Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 16/46 (34%), Gaps = 4/46 (8%) Query: 1 MKQYHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYY 42 M Y + ++ L+ GE ++ + ++ Q N Sbjct: 531 MNFYQRLEQRTENSLEKMMGGEKVDYAGALVLLLRLRQSCNHPDLV 576 >gi|73986626|ref|XP_867807.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 17 [Canis familiaris] Length = 1579 Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 972 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1031 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1032 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1091 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1092 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1147 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1148 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1196 >gi|73946623|ref|XP_859981.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b isoform 10 [Canis familiaris] Length = 1456 Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDE----EKHWKEVH 52 Y Q + G + + ++ ++ N + + + Sbjct: 861 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEVNCSNTVFLF 920 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 921 CLSGFRAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 980 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 981 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1036 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1037 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1085 >gi|326480845|gb|EGE04855.1| chromodomain helicase hrp3 [Trichophyton equinum CBS 127.97] Length = 1558 Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 74/218 (33%), Gaps = 34/218 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEK 46 ++ Y + Y L G + + ++ + +N + +++ Sbjct: 743 LELYKNILTKNYDALNHGGKGPKPSLLNIMMELKKASNHPFMFWGPEEQAGGSTRREDQL 802 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 K+ L+ ++ K + +++ L L + Sbjct: 803 KALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGFNYQRLDGTIAA 862 Query: 98 ---PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I+ +N + G G+NL + ++ F W+ + + Sbjct: 863 GPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQA 916 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++T++E VL+R R K + Sbjct: 917 MARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLL 954 >gi|73997408|ref|XP_867779.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 6 [Canis familiaris] Length = 1870 Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 922 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 981 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 982 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1041 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1042 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1095 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1096 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1137 >gi|10434055|dbj|BAB14112.1| unnamed protein product [Homo sapiens] Length = 730 Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 222 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 281 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 282 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 341 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 342 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 398 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 399 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 455 >gi|325096129|gb|EGC49439.1| ATP-dependent helicase RIS1 [Ajellomyces capsulatus H88] Length = 1052 Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 58/163 (35%), Gaps = 18/163 (11%) Query: 47 HWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTLD---------- 95 + + KI+ L I++ ++ IV F S L +++ Sbjct: 809 TPEHLASTKIRYLMKILKAESGDYKFIVFSFFTSMLNKIEPFLKDSHIGYVRYDGAMRND 868 Query: 96 -KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + N K +L + GLNL + +V +W+ +E + Sbjct: 869 LREISLDKLRNSPKTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEEQAID 922 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + V +Y L +NT++E ++ K + + + Sbjct: 923 RVHRLNQTVDVKIYKLTIKNTVEERIVDLQERKRELANATIEG 965 Score = 39.0 bits (89), Expect = 0.38, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 15/43 (34%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + + L + +NI ++ ++ Q N Sbjct: 549 YKRLEQRTDKTLERMIGDDNINYASALVLLLRLRQACNHPDLV 591 >gi|302683608|ref|XP_003031485.1| hypothetical protein SCHCODRAFT_77313 [Schizophyllum commune H4-8] gi|300105177|gb|EFI96582.1| hypothetical protein SCHCODRAFT_77313 [Schizophyllum commune H4-8] Length = 634 Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 21/189 (11%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN----AAPIIVAYHFNSDLA----- 82 + + K++ + I+++ IV F S L Sbjct: 429 LDRFCRDCAMLKAMRVDGMSSSAKLRKIMEILDEIEDRGEGEKTIVFSQFTSMLDLIEPF 488 Query: 83 ------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 R + + R ++ Q I ++ + GLNL N ++ Sbjct: 489 LKKRGVRFVRYDGKMRADMREHSLKQIRENESIKVILISFKAGSTGLNLTA-CNNVILVD 547 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +WW+ E R + G +R V +Y L +T+++ +L K + L+ Sbjct: 548 MWWNPAL-----EDQAFDRAHRFGQQRPVNIYKLKIDDTVEDRILALQEKKRELTKAALS 602 Query: 197 ALKKETIHV 205 K + + + Sbjct: 603 GEKVKNLRL 611 >gi|241250526|ref|XP_002403274.1| chromodomain helicase DNA binding protein, putative [Ixodes scapularis] gi|215496466|gb|EEC06106.1| chromodomain helicase DNA binding protein, putative [Ixodes scapularis] Length = 1514 Score = 91.3 bits (225), Expect = 8e-17, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 70/221 (31%), Gaps = 37/221 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE- 60 K Y + G + + ++ + N AV + + + ++ + Sbjct: 725 KNYKALSK-------GVKGSSSGFINIMMELKKCCNHAVLIRPPEQPAVNNVDALQQIIR 777 Query: 61 -----------VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 + K ++V L + R + Sbjct: 778 GSGKLLLLDKLLCRLKETGHRVLVFSQMVRMLDIIADYLQLRRFPFQRLDGSIKGELRRQ 837 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + G G+NL + +V F W+ + + R Sbjct: 838 ALDHFNADTSQDFCFLLSTRAGGLGINL-ATADTVVIFDSDWNPQN-----DLQAQARAH 891 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +N+++E +++R + K + L++ + Sbjct: 892 RIGQKNQVNIYRLVTKNSVEEDIIERAKRKMVLDHLVIQRM 932 >gi|322828989|gb|EFZ32571.1| helicase, putative [Trypanosoma cruzi] Length = 1268 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 58/142 (40%), Gaps = 17/142 (11%) Query: 65 KANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLF 113 + +++ F L ++ + +N + +I + Sbjct: 903 RREGHRMLIFTQFVHMLNILERFLAIIGIPYLRIDGSTQAERRQAFVDRFNEDDRITCMI 962 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 S G GLNL G + ++F+ W+ ++ R + G + V +Y LI++ Sbjct: 963 LSTRSGGIGLNLT-GADTVIFYDSDWNPT-----MDLQAQDRCHRIGQTKPVTIYRLISE 1016 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 +T++E +LQR R + + ++++ Sbjct: 1017 HTVEENILQRARERKKLNNVVI 1038 >gi|154346446|ref|XP_001569160.1| helicase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066502|emb|CAM44296.1| putative helicase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1284 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 69/157 (43%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFP-QGRTLDK---------DPC 99 K++ LE + + + +++ F + L L++ G + Sbjct: 866 DCGKLQFLETALKKMRHDGHRVLIFTQFVNMLNILERFLALIGVVYTRLDGSTKAELRQQ 925 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + +I + S G GLNL G + ++F+ W+ ++ R + Sbjct: 926 YVDRFNADPRITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPT-----MDLQAQDRCHR 979 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V +Y LI+++T++E +L++ R + + ++++ Sbjct: 980 IGQTRPVTIYRLISEHTVEESILEKARERKKLNNVVI 1016 >gi|73977360|ref|XP_864115.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (Helicase with SNF2 domain 1) isoform 3 [Canis familiaris] Length = 1934 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 71/236 (30%), Gaps = 42/236 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L + N + ++ + N + + Sbjct: 410 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHI 469 Query: 52 ------------HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 470 IPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYER 529 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 530 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 586 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G +AV VY LI +N+ + + + K + +L ++ Sbjct: 587 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 639 >gi|326476226|gb|EGE00236.1| chromodomain helicase [Trichophyton tonsurans CBS 112818] Length = 1558 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 74/218 (33%), Gaps = 34/218 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEK 46 ++ Y + Y L G + + ++ + +N + +++ Sbjct: 743 LELYKNILTKNYDALNHGGKGPKPSLLNIMMELKKASNHPFMFWGPEEQAGGSTRREDQL 802 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 K+ L+ ++ K + +++ L L + Sbjct: 803 KALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGFNYQRLDGTIAA 862 Query: 98 ---PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I+ +N + G G+NL + ++ F W+ + + Sbjct: 863 GPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQA 916 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++T++E VL+R R K + Sbjct: 917 MARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLL 954 >gi|218200191|gb|EEC82618.1| hypothetical protein OsI_27196 [Oryza sativa Indica Group] Length = 1734 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 26/230 (11%), Positives = 69/230 (30%), Gaps = 35/230 (15%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + +L + + V+ + N ++ H + Sbjct: 845 QYYKWILERNFQNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSIGDRNKV 904 Query: 61 VIIEKANA----------------APIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 I ++ +++ L L + + Sbjct: 905 ERIVMSSGKLVLLDKLLVRLRETNHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTRA 964 Query: 98 ---PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +N + G G+NL + ++ F W+ + + Sbjct: 965 DLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQA 1018 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1019 MSRAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNAEG 1068 >gi|159131149|gb|EDP56262.1| chromodomain helicase (Chd1), putative [Aspergillus fumigatus A1163] Length = 1523 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 72/219 (32%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y + Y L + + + ++ + +N + + Sbjct: 691 LEYYKNILTKNYAALNDGAQGQKQSLLNIMMELKKASNHPFMFPNAEAKILEGSTRREDV 750 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 751 LRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYMESRGYSYQRLDGTIP 810 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + ++ F W+ + + Sbjct: 811 AASRRLAIEHFNAPGSSDFCFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQ 864 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E V++R R K + Sbjct: 865 AMARAHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLL 903 >gi|146081503|ref|XP_001464269.1| DNA excision repair protein [Leishmania infantum JPCM5] gi|134068360|emb|CAM66648.1| putative DNA excision repair protein [Leishmania infantum JPCM5] Length = 1261 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 56/217 (25%) Query: 29 TVKCLQLANG-------------------------------------AVYYDEEKHWKEV 51 + Q+ N + + Sbjct: 799 MNQLRQICNHADIYAVQQGADEEDRMMLGRRGAAAKLSAISAARPGQHRSFRSNNPVDLL 858 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 K+ AL +++ ++ ++V L ++ Q Sbjct: 859 GSGKLNALLMMLKEWQSFGHRVLVFSQTRMMLDIIENMCEQQAYRYIRMDGATNSHYRQE 918 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + I + G G+NL G + +V F W+ + + R + Sbjct: 919 LMDRFNEDVSIFVALLTTRVGGIGVNL-IGADRVVIFDPDWNP-----ITDVQARERAWR 972 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G KR V VY LI +++E +L+R K + D +L Sbjct: 973 IGQKREVCVYRLITSGSVEESILRRQLAKMYVTDKVL 1009 >gi|157107190|ref|XP_001649665.1| chromodomain helicase DNA binding protein [Aedes aegypti] gi|108879646|gb|EAT43871.1| chromodomain helicase DNA binding protein [Aedes aegypti] Length = 2002 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 75/223 (33%), Gaps = 32/223 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-ASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + + L+ + N+ + ++ + N A+ E+ + Sbjct: 820 QYYRWILTKNFDALRKGTKGSINTFLNIMIELKKCCNHALLTKPEEFENQTNQDEVVVQL 879 Query: 51 -VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---------- 97 K+ L+ ++ K +++ L L + + + Sbjct: 880 LKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHFSFQRLDGSIKGELR 939 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + G G+NL + ++ F W+ + + R Sbjct: 940 KQALDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQAR 993 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 994 AHRIGQKNQVNIYRLVTARSVEEDIVERAKKKMVLDHLVIQRM 1036 >gi|302793538|ref|XP_002978534.1| hypothetical protein SELMODRAFT_443867 [Selaginella moellendorffii] gi|300153883|gb|EFJ20520.1| hypothetical protein SELMODRAFT_443867 [Selaginella moellendorffii] Length = 1858 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 16/192 (8%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 E+ + + + +E + L V + + +IE Sbjct: 1340 EEILKESKRDVLENSGKMVLIMTLL------SLNSSRGEKTLVFSQSL-HTLDLIENFLD 1392 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNL 125 + + R T + +N+ I L + G N+ Sbjct: 1393 TIPLGGSQDVWNKGREWLRLDGNTTASRRQQIADIFNDPNNTAIKCLLISTKAGSLGTNM 1452 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 G N ++ W+ + + R + G + VFVY L+A T++E + R Sbjct: 1453 T-GANRVIIVDGSWNPTH-----DLQALFRAWRYGQTKPVFVYRLLAYGTMEEKIYNRQL 1506 Query: 186 TKSTIQDLLLNA 197 TK I +L+A Sbjct: 1507 TKEGIAARVLDA 1518 >gi|260946861|ref|XP_002617728.1| hypothetical protein CLUG_03172 [Clavispora lusitaniae ATCC 42720] gi|238849582|gb|EEQ39046.1| hypothetical protein CLUG_03172 [Clavispora lusitaniae ATCC 42720] Length = 1284 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 62/158 (39%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K+ L+ ++++ N ++V + + +++ + + Sbjct: 1059 SGKLSKLDKLLDELKQNDHRVLVYFQMTKMMDLMEEFLTFRQHNYVRLDGSSKLEDRRDL 1118 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1119 VHDWQTKPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1172 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V VY L+ + TI+E + R + K +Q +++ Sbjct: 1173 GQTKQVTVYRLLTKGTIEERMRDRAKQKEQVQQVVMEG 1210 >gi|172087300|ref|XP_001913192.1| TBP-associated factor 172 [Oikopleura dioica] gi|48994300|gb|AAT47874.1| TBP-associated factor 172 [Oikopleura dioica] Length = 1665 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 75/208 (36%), Gaps = 28/208 (13%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQL---A-----NGAVYYDEEKHWKEVHDEK 55 Y + D G +I A K QL NG+V + H Sbjct: 1398 YQSIMTD--LDRNGSSIRDIEHAPKIKALKQLLTECGIGQRNGSVVSEHRALIFCQHKSM 1455 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 + +E + K+N P + + +N + I +L Sbjct: 1456 LDIIERDLFKSNQLPSVSFSR-----------LDGSVPAGARHGIVSRFNRDPTIDVLLL 1504 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G ++++F W+ + ++ + R + G K+ V VY LI +N Sbjct: 1505 TTKVGGLGLNLT-GADVVIFVEHDWNPQ-----MDLQAMDRAHRIGQKKTVNVYRLITRN 1558 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 T++E ++ + K +I + L++ Sbjct: 1559 TVEEKIMGLQKFKLSIANSLVSGDNASM 1586 >gi|242767903|ref|XP_002341462.1| chromodomain helicase (Chd1), putative [Talaromyces stipitatus ATCC 10500] gi|218724658|gb|EED24075.1| chromodomain helicase (Chd1), putative [Talaromyces stipitatus ATCC 10500] Length = 1499 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEK------------- 46 ++ Y + Y L +G N + + + ++ + +N + + Sbjct: 686 LEYYKNILTKNYAALNEGANGQKQSLLNIMMELKKASNHPFMFPNAEAKLLEGNTRREDL 745 Query: 47 -HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 746 LRIMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMRFRGYQYQRLDGTIS 805 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N + G G+NL + ++ F W+ + + Sbjct: 806 ATNRRVAMEHFNAPDSSDFAFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQ 859 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++TI+E VL+R R K + Sbjct: 860 AMARAHRIGQTKPVSVYRLVSKDTIEEEVLERARNKLML 898 >gi|156848828|ref|XP_001647295.1| hypothetical protein Kpol_1002p85 [Vanderwaltozyma polyspora DSM 70294] gi|156117980|gb|EDO19437.1| hypothetical protein Kpol_1002p85 [Vanderwaltozyma polyspora DSM 70294] Length = 1070 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 73/220 (33%), Gaps = 31/220 (14%) Query: 2 KQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--EEKHWKEVHDEKI 56 K Y + + G + ++ + +N +D E + + Sbjct: 383 KWYKQILEKDLDAVNGANGNKESKTRLLNIVMQLRKCSNHPYLFDGAEPGPPYTTDEHLV 442 Query: 57 KALEVIIEKA--------NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 E ++ + +++ + L L+ + Sbjct: 443 YNSEKLLVLDKLLKKLKAEGSRVLIFSQMSRILDILEDYCYFRGYEYCRIDGSTAHEDRI 502 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N L + G G+NL +++V + W+ + + + R Sbjct: 503 QAIDDYNAPDSNKFLFLLTTRAGGLGINLTS-ADVVVLYDSDWNPQA-----DLQAMDRA 556 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V+ L+ N+++E +L+R K + L++ Sbjct: 557 HRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQ 596 >gi|145491053|ref|XP_001431526.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124398631|emb|CAK64128.1| unnamed protein product [Paramecium tetraurelia] Length = 1668 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 72/225 (32%), Gaps = 38/225 (16%) Query: 3 QYHKFQRELYCDLQGENIE-AFNSASKTV---KCLQLANGAVYYDEEKHWKEVH------ 52 Y L+ + A N+AS + + N E ++ Sbjct: 805 IYKALYERNKSMLEQGFSQWAANAASLNNLEIQLRKCCNHPFLIQEMQNDLTKGCSNKND 864 Query: 53 --------DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK------ 96 K+ L+ ++ K +++ F L+ L++ + + Sbjct: 865 YILKLVECSGKMILLDKLLNKFRNEGKKMLIFSQFTMMLSILEEYLKFRQVKYEKIDGQI 924 Query: 97 ----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I +N+ + + + G G+NL I+V + W+ + + Sbjct: 925 KARERQNAIDRFNDPQKKREVFLLSTKAGGQGINLTA-AEIVVIYDSDWNPQN-----DV 978 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + V VY LI ++T + + +R K + + Sbjct: 979 QATARAHRIGQSKEVTVYRLITKDTYEAEMFERAIKKLGLDQAIF 1023 >gi|157107192|ref|XP_001649666.1| chromodomain helicase DNA binding protein [Aedes aegypti] gi|108879647|gb|EAT43872.1| chromodomain helicase DNA binding protein [Aedes aegypti] Length = 2001 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 75/223 (33%), Gaps = 32/223 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-ASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + + L+ + N+ + ++ + N A+ E+ + Sbjct: 820 QYYRWILTKNFDALRKGTKGSINTFLNIMIELKKCCNHALLTKPEEFENQTNQDEVVVQL 879 Query: 51 -VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---------- 97 K+ L+ ++ K +++ L L + + + Sbjct: 880 LKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQKRHFSFQRLDGSIKGELR 939 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + G G+NL + ++ F W+ + + R Sbjct: 940 KQALDHFNAEGSTDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQAR 993 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 994 AHRIGQKNQVNIYRLVTARSVEEDIVERAKKKMVLDHLVIQRM 1036 >gi|73997438|ref|XP_867887.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 21 [Canis familiaris] Length = 1889 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 961 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1020 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1021 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1080 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1081 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1134 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1135 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1176 >gi|301622634|ref|XP_002940630.1| PREDICTED: hypothetical protein LOC100494134 [Xenopus (Silurana) tropicalis] Length = 914 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 54/123 (43%), Gaps = 7/123 (5%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + + +++ ++ +N + +I S G G+NL G + ++F Sbjct: 10 QFLNYHGHIYLRLDGSTRVEQRQVLMERFNMDRRIFCFILSTRSGGVGINLT-GADTVIF 68 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ ++ R + G R V +Y L+++ T++E +L++ + K + D+ Sbjct: 69 YDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTVEENILKKAQQKRMLGDMA 123 Query: 195 LNA 197 + Sbjct: 124 IEG 126 >gi|253744203|gb|EET00442.1| DNA-dependent ATPase, putative [Giardia intestinalis ATCC 50581] Length = 1272 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 74/211 (35%), Gaps = 27/211 (12%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DEKIKAL 59 + L +I + + ++ + A+ ++ + K+ L Sbjct: 439 LDKVLRSKSNTSSIGKTSLINIVMQLRKCADHPYLFNGVEPQPFKEGDHIVNVSGKMVVL 498 Query: 60 EVIIEKAN--AAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEG 107 + +I + ++V S L + L+ ++ +N Sbjct: 499 DKLITRIKAINEKVLVFCQMTSMLNIIEDYLRYREHLYCRIDGSTDLETRAKYMKMFNMP 558 Query: 108 KIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 P+ + GLNL N ++ + ++ + + V R + + V Sbjct: 559 TSPVFVFLLSTRAGCLGLNLTA-ANHVIIYQQDFNPQA-----DLQAVARAYRLLQTKEV 612 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY L+A+NT+D + +R + K + +L++ Sbjct: 613 FVYRLLAENTVDTRIYERAQLKLGLDNLIIQ 643 >gi|320169070|gb|EFW45969.1| TBP-associated factor 172 [Capsaspora owczarzaki ATCC 30864] Length = 2065 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 7/118 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + ++N + I LL G GLNL G + ++F Sbjct: 1856 HMPTVSYLRLDGSIPPLERFAIVTKFNEDPSIDLLLLTTHVGGLGLNLT-GADTVIFIDH 1914 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + + R + G ++ V VY LI + T++E ++ + K I + ++ Sbjct: 1915 DWNPSR-----DLQAMDRAHRIGQRKVVNVYRLITRGTLEEKIMSLQQFKLNIANTVI 1967 >gi|316972001|gb|EFV55707.1| domain protein, SNF2 family [Trichinella spiralis] Length = 1787 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 74/233 (31%), Gaps = 44/233 (18%) Query: 3 QYHKFQRELYCDLQGENIEA--------FNSASKTVKCLQLANGAVYYDEEKHWKEVH-- 52 Y Q + + + + ++ +L N ++ + H Sbjct: 1048 LYQHMQAKGVMVTRETDKTKKGTPAAGVRTLMNTVMQLRKLCNHPYMFEHIEEAMAEHFG 1107 Query: 53 --------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------ 90 K + L+ ++ K A+ +++ + ++ F Sbjct: 1108 YPDKIVSGPELYRASGKFELLDRVLPKLKASGHRVLLFCQMTCLMTIMEDYFHYRDFKYL 1167 Query: 91 ----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + ++N + + G GLNLQ + ++ F W+ + Sbjct: 1168 RLDGTTKSEDRGELLAKFNAPASDYFIFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ- 1225 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G R V V L+ N+++E +L R K + + ++ A Sbjct: 1226 ----DIQAQDRAHRIGQLREVRVLRLMTVNSVEERILAAARYKLNVDEKVIQA 1274 >gi|297690951|ref|XP_002822857.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 4-like [Pongo abelii] Length = 1879 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 966 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1025 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1026 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1085 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1086 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1139 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1140 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1181 >gi|255586403|ref|XP_002533848.1| ATP binding protein, putative [Ricinus communis] gi|223526215|gb|EEF28539.1| ATP binding protein, putative [Ricinus communis] Length = 1339 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 66/172 (38%), Gaps = 20/172 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---- 90 + + K++ L++++++ A +++ L L+ Sbjct: 1130 CPPMQSFDPAK-LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYR 1188 Query: 91 -------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 +D+ + I + + G G+NL + ++F+ W+ Sbjct: 1189 YLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTA-ADTVIFYESDWNPTL 1247 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + + R + G + V VY LI + T++E +LQR K+T+Q L++ Sbjct: 1248 -----DLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVM 1294 >gi|169617355|ref|XP_001802092.1| hypothetical protein SNOG_11855 [Phaeosphaeria nodorum SN15] gi|160703388|gb|EAT80899.2| hypothetical protein SNOG_11855 [Phaeosphaeria nodorum SN15] Length = 1950 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 20/150 (13%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-------------DKDPCTIQEWN-E 106 + E + ++ L +Q Q K + ++N + Sbjct: 1715 DLPEAVSQHRALIFCQMKEMLDMVQNTVLQKMLPSVQFMRLDGTVEATKRQEIVNKFNSD 1774 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL G + ++F W+ ++ + + R + G K+ V Sbjct: 1775 PSYDVLLLTTSVGGLGLNLT-GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVN 1828 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY ++ + T++E +L R K + ++N Sbjct: 1829 VYRIVTRGTLEEKILSLQRFKIDVASTVVN 1858 >gi|119609185|gb|EAW88779.1| chromodomain helicase DNA binding protein 4, isoform CRA_c [Homo sapiens] Length = 1908 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 981 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1040 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1041 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1100 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1101 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1154 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1155 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1196 >gi|294660081|ref|XP_002770708.1| DEHA2G22682p [Debaryomyces hansenii CBS767] gi|218512083|sp|Q6BGY8|INO80_DEBHA RecName: Full=Putative DNA helicase INO80 gi|199434455|emb|CAR66027.1| DEHA2G22682p [Debaryomyces hansenii] Length = 1364 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 60/158 (37%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K+ L+ ++ N +++ + + +++ + + Sbjct: 1141 SGKLSKLDELLVDLRQNDHRVLIYFQMTKMMDLMEEYLTYRQHKYIRLDGSSKLDDRRDL 1200 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1201 VHDWQTKPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1254 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1255 GQTRQVTVYRLLTRGTIEERMRDRAKQKEQVQQVVMEG 1292 >gi|119609183|gb|EAW88777.1| chromodomain helicase DNA binding protein 4, isoform CRA_a [Homo sapiens] Length = 1911 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 984 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1043 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1044 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1103 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1104 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1157 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1158 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1199 >gi|51599156|ref|NP_001264.2| chromodomain-helicase-DNA-binding protein 4 [Homo sapiens] gi|311033360|sp|Q14839|CHD4_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 4; Short=CHD-4; AltName: Full=ATP-dependent helicase CHD4; AltName: Full=Mi-2 autoantigen 218 kDa protein; AltName: Full=Mi2-beta Length = 1912 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 984 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1043 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1044 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1103 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1104 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1157 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1158 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1199 >gi|1107696|emb|CAA60384.1| Mi-2 protein [Homo sapiens] gi|119609184|gb|EAW88778.1| chromodomain helicase DNA binding protein 4, isoform CRA_b [Homo sapiens] Length = 1912 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 984 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1043 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1044 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1103 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1104 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1157 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1158 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1199 >gi|308491646|ref|XP_003108014.1| hypothetical protein CRE_12565 [Caenorhabditis remanei] gi|308249961|gb|EFO93913.1| hypothetical protein CRE_12565 [Caenorhabditis remanei] Length = 1375 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 73/225 (32%), Gaps = 35/225 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------- 53 Y + + D + A + + V+ +L N + + Sbjct: 785 MYRSMKNGVLLD-GKTSSGARSLMNTIVQLRKLCNHPFLFPTIEESCRTSWKVNHVGGLD 843 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ I+ K +++ + S + + D+ Sbjct: 844 LMRVAGKLELLDRILPKLKATGHRVLMFFQMTSMMTIFEDYLNFRNHTYLRLDGSTKPDE 903 Query: 97 DPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G GLNLQ + ++ F W+ + Sbjct: 904 RGDLLTLYNAPDSKYFLFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQD 957 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V V LI N+++E +L R K + + ++ A K Sbjct: 958 RAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGK 1002 >gi|303324355|ref|XP_003072165.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240111875|gb|EER30020.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320037193|gb|EFW19131.1| SWI/SNF family DNA-dependent ATPase Ris1 [Coccidioides posadasii str. Silveira] Length = 988 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 58/160 (36%), Gaps = 21/160 (13%) Query: 53 DEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------- 97 KI I+ + N I+ F + L L+ + + Sbjct: 810 SSKIDKALEILREIESCNNGEKTIIFSQFTTLLDLLEVPIMREGWHYRRYDGSMSPIQRN 869 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + ++ + GLNL + ++ F +W+ IE + R Sbjct: 870 EAVLEFSDNENCKIMLVSLKAGNAGLNLVA-ASQVIIFDPFWNP-----YIEEQAIDRAH 923 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V+ ++ ++T+++ +L+ K + + L+ Sbjct: 924 RIGQIRPVMVHRILVRDTVEDRILELQEKKRELIENALDE 963 Score = 35.5 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 5/55 (9%), Positives = 12/55 (21%), Gaps = 6/55 (10%) Query: 4 YHKFQRELYCD----LQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVH 52 Y +++ L + N ++ Q V+ Sbjct: 563 YQSLEQKTQNQFNRYLDNGTVGKHYSNVLVMLLRLRQACCHPHLIQLFSDDSHVN 617 >gi|222637616|gb|EEE67748.1| hypothetical protein OsJ_25446 [Oryza sativa Japonica Group] Length = 1734 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 26/230 (11%), Positives = 69/230 (30%), Gaps = 35/230 (15%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + +L + + V+ + N ++ H + Sbjct: 845 QYYKWILERNFQNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSIGDRNKV 904 Query: 61 VIIEKANA----------------APIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 I ++ +++ L L + + Sbjct: 905 ERIVMSSGKLVLLDKLLVRLRETNHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTRA 964 Query: 98 ---PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +N + G G+NL + ++ F W+ + + Sbjct: 965 DLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQA 1018 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 1019 MSRAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNAEG 1068 >gi|73997402|ref|XP_867754.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 3 [Canis familiaris] Length = 1905 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 977 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1036 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1037 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1096 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1097 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1150 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1151 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1192 >gi|73986628|ref|XP_867815.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 18 [Canis familiaris] Length = 1593 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 986 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1045 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1046 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1105 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1106 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1161 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1162 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1210 >gi|70995269|ref|XP_752395.1| chromodomain helicase (Chd1) [Aspergillus fumigatus Af293] gi|66850030|gb|EAL90357.1| chromodomain helicase (Chd1), putative [Aspergillus fumigatus Af293] Length = 1523 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 72/219 (32%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y + Y L + + + ++ + +N + + Sbjct: 691 LEYYKNILTKNYAALNDGAQGQKQSLLNIMMELKKASNHPFMFPNAEAKILEGSTRREDV 750 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 751 LRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYMESRGYSYQRLDGTIP 810 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + ++ F W+ + + Sbjct: 811 AASRRLAIEHFNAPGSSDFCFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQ 864 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E V++R R K + Sbjct: 865 AMARAHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLL 903 >gi|322497673|emb|CBZ32748.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1262 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 56/217 (25%) Query: 29 TVKCLQLANG-------------------------------------AVYYDEEKHWKEV 51 + Q+ N + + Sbjct: 799 MNQLRQICNHADIYAVQQGADEEDRMMLGRRGAAAKLSAISAARPGQHRSFRSNNPVDLL 858 Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 K+ AL +++ ++ ++V L ++ Q Sbjct: 859 GSGKLNALLMMLKEWQSFGHRVLVFSQTRMMLDIIENMCEQQAYRYIRMDGATNSHYRQE 918 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + I + G G+NL G + +V F W+ + + R + Sbjct: 919 LMDRFNEDVSIFVALLTTRVGGIGVNL-IGADRVVIFDPDWNP-----ITDVQARERAWR 972 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G KR V VY LI +++E +L+R K + D +L Sbjct: 973 IGQKREVCVYRLITSGSVEESILRRQLAKMYVTDKVL 1009 >gi|224043897|ref|XP_002197085.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 [Taeniopygia guttata] Length = 1919 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 978 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1037 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1038 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1097 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1098 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1151 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1152 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1193 >gi|15291937|gb|AAK93237.1| LD32234p [Drosophila melanogaster] Length = 1095 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 67/179 (37%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 + + + + K++ ++ ++ + N +++ L L+ Sbjct: 234 LHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLN 293 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ +N + +I S G G+NL G + ++F+ Sbjct: 294 YHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSD 352 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 353 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 406 >gi|42569923|ref|NP_182025.2| transcription regulatory protein SNF2, putative [Arabidopsis thaliana] gi|330255398|gb|AEC10492.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 851 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 84/225 (37%), Gaps = 31/225 (13%) Query: 2 KQYHK-FQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEV 51 K Y ++EL +L + + ++ + + + EE Sbjct: 306 KIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQ 365 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPC 99 K+ L+ ++++ + +++ S L LQ ++ Sbjct: 366 ASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFA 425 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ ++ + + G GLNL + ++F+ W+ + +++ + R Sbjct: 426 AIKNFSVDGSNAFVFMISTRAGGVGLNLVA-ADTVIFYEQDWNPQ-----VDKQALQRAH 479 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL-NALKKE 201 + G V L+ +++++E++L+R K + ++ + ++++ Sbjct: 480 RIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEK 524 >gi|71000114|ref|XP_754774.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293] gi|66852411|gb|EAL92736.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293] gi|159127782|gb|EDP52897.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163] Length = 1133 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 22/179 (12%) Query: 32 CLQLA-NGAVYYDEE--KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN-------- 78 C QL N + K+ + ++ K+ L ++ + N +V F Sbjct: 925 CHQLCLNHPHSLGKFALKNEEWMNSGKVDKLCELLKRFQENGDRTLVFSQFTLVMDILEH 984 Query: 79 --SDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFF 135 L ++ + ++E IP+ + G G+NL N +V F Sbjct: 985 VLETLHLGFVRLDGRTNVEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVVIF 1043 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ + + R + G R V V L+ ++TI+E + +TK + + Sbjct: 1044 DSSFNPQ-----EDVQAENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAV 1097 >gi|321478915|gb|EFX89871.1| DNA excision repair protein ERCC-6-like protein [Daphnia pulex] Length = 1584 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 52/162 (32%), Gaps = 26/162 (16%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCT 100 K+ +E ++ K +++ L L+ Q Sbjct: 1033 SGKLLVVESLLKIWKEQNHRVLLFSQSRQMLDILECFIRQQSYNYLRLDGTTSIGSRQPM 1092 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+++N I + G N ++ + W+ + R + Sbjct: 1093 IEKYNKSADIFVFLLTTRVGG--------ANRVIIYDPDWNPST-----DTQARERAWRI 1139 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G ++ V +Y L+ TI+E + R K + + +L K+ Sbjct: 1140 GQQKDVTIYRLLTSGTIEEKIYHRQIFKQYLTNRVLKDPKQR 1181 >gi|294658278|ref|XP_460608.2| DEHA2F05676p [Debaryomyces hansenii CBS767] gi|202953010|emb|CAG88933.2| DEHA2F05676p [Debaryomyces hansenii] Length = 1161 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 74/199 (37%), Gaps = 20/199 (10%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 R+ + N + + K QL + ++ ++ + ++ ++E Sbjct: 949 RDKIAEFYNINYSSNGKTTNMQKIRQL----IQENKGFTPSAKMEKCMHLIKDVLENYPD 1004 Query: 69 APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 II+ F S ++ + +LD+ TI+++ +G +L + Sbjct: 1005 EKIIIFSQFLSLFDLMKLVLANEKIPFLRYDGSMSLDEKNSTIKQFYQGSTKVLLISLRA 1064 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GL L + ++ +W+ +E + R + G +R V V+ ++ + +++ Sbjct: 1065 GNVGLTLT-CASHVIIMDPFWNP-----YVEEQAMDRAHRIGQQRDVRVHRILTEGSVEG 1118 Query: 179 LVLQRLRTKSTIQDLLLNA 197 ++ K I L+ Sbjct: 1119 RIMTLQNEKKEIISGALDE 1137 Score = 35.9 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 15/151 (9%), Positives = 35/151 (23%), Gaps = 9/151 (5%) Query: 4 YHKF-----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 Y + ++ + + + ++ Q + E K E A Sbjct: 762 YRELEQGIQKKAKTLLASEKLGSTSSILTLLLRLRQACCHSFLV-EMGRMKAAESE---A 817 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 + +I + + + F+ D + L K + L Sbjct: 818 TKTLITRDWKSMYVNIQKFDEDTINRIRNEVHQGNLLKGENEGESNTNSDEDLFTCPICY 877 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G + +E + E Sbjct: 878 DVLGYESIVLFSGCGHMICNNCIENFFERFE 908 >gi|167539947|ref|XP_001741453.1| chromodomain helicase hrp1 [Entamoeba dispar SAW760] gi|165893990|gb|EDR22091.1| chromodomain helicase hrp1, putative [Entamoeba dispar SAW760] Length = 1249 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 37/225 (16%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYD---------------E 44 + Y + L + N + ++ ++ N + Sbjct: 552 QYYRALYEKNREFLNKGCVGSNVPNLQNLMMQLRKVCNHPYLIPGVEEKDTAQFPEGSPD 611 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 + K+ L+ ++ K A+ +++ L ++K + Sbjct: 612 YFNQLIRSSGKLVLLDKLLPKLYADHHKVLIFSQLKKVLNIIEKYLKYKGYFYERLDGSI 671 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I + ++ + + G G+NL + ++ + W+ + + Sbjct: 672 KSEDRQNAIDRFMNPEMNRFIFLLCTRAGGFGINL-SEADTVIIYDSDWNPQN-----DL 725 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G K+ V VY L+++NT + + +R K + +L Sbjct: 726 QAQARCHRIGQKKEVKVYRLVSKNTYERYMFERASMKLGLDQAVL 770 >gi|119173796|ref|XP_001239291.1| hypothetical protein CIMG_10313 [Coccidioides immitis RS] Length = 1520 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 74/219 (33%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y + Y L G + + + ++ + +N + + Sbjct: 708 LEYYKNILTKNYAALNQGAKGQKQSLLNIMMELKKASNHPFMFANAEDRILQGSTRREDA 767 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 768 LRALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMVRMLDILADYMDARGFAYQRLDGTIA 827 Query: 98 ----PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + G G+NL + ++ F W+ + + Sbjct: 828 AGPRRLSIEHFNAPDSTDFAFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQ 881 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++T++E V++R R K + Sbjct: 882 AMARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLL 920 >gi|330417956|ref|NP_001193430.1| chromodomain-helicase-DNA-binding protein 4 [Bos taurus] gi|296487143|gb|DAA29256.1| chromodomain helicase DNA binding protein 4 [Bos taurus] Length = 1912 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 984 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1043 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1044 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1103 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1104 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1157 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1158 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1199 >gi|73997406|ref|XP_867770.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 5 [Canis familiaris] Length = 1910 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 962 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1021 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1022 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1081 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1082 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1135 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1136 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1177 >gi|328703392|ref|XP_001951508.2| PREDICTED: helicase domino-like [Acyrthosiphon pisum] Length = 2483 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 68/179 (37%), Gaps = 11/179 (6%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS 79 I A + + +Q G + + + + K V+I + + F + Sbjct: 1322 ISAMSVLFPDQRLIQYDCGKLQSLDY----LLRELKTGHHRVLIFTQMTKMLDILEAFLN 1377 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++ ++ +N + + S G G+NL G + ++F+ Sbjct: 1378 FHGYIYLRLDGTTKVETRQLLMERFNADKRYFCFILSTRSGGVGINLT-GADTVIFYDSD 1436 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y LI++ TI+E +L++ K + DL + Sbjct: 1437 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLISEKTIEENILKKANQKRLLGDLAIEG 1490 >gi|73997444|ref|XP_867907.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 23 [Canis familiaris] Length = 1895 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 967 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1026 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1027 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1086 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1087 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1140 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1141 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1182 >gi|224139776|ref|XP_002323271.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222867901|gb|EEF05032.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1540 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 68/172 (39%), Gaps = 20/172 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---- 90 + + K++ L++++++ A +++ L L+ Sbjct: 1201 CPPMQSFDPAK-LLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYR 1259 Query: 91 ------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 T+ ++++ I + + G G+NL + ++F+ W+ Sbjct: 1260 YLRLDGSSTIMDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTA-ADTVIFYESDWNPTL 1318 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + + R + G + V VY LI + T++E +LQR K+T+Q L++ Sbjct: 1319 -----DLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVM 1365 >gi|156369786|ref|XP_001628155.1| predicted protein [Nematostella vectensis] gi|156215124|gb|EDO36092.1| predicted protein [Nematostella vectensis] Length = 756 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 80/243 (32%), Gaps = 47/243 (19%) Query: 3 QYHKFQRELYCDLQGENIEA-------FNSASKTVKCLQLANGAVYYDEEKHWKEVH--- 52 Y + ++ +S +L N E+ ++ Sbjct: 422 IYKRLIHSKALKIKLAEGSKGKPGGVSTSSLGFITSLKKLCNHPELIYEKAQMEDEGFEG 481 Query: 53 ------------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ- 90 K++ L+ I+ + + +++ ++ L +K Q Sbjct: 482 VLEMFPQKFDLKNVQPELSGKMQVLDYILAVTKATSDDKVVLVSNYTQTLDLFEKLCRQR 541 Query: 91 ---------GRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ++ K + +N+ K + + G GLNL G N LV F W Sbjct: 542 RYQHVRLDGSMSIKKRQKIVDRFNDPKGGDFIFMLSSKAGGCGLNL-IGANRLVMFDPDW 600 Query: 140 DLEEHQQMIERIGVTRQRQAGFKR---AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Q + R+ Q++ VF+Y L++ TI+E + QR K + +++ Sbjct: 601 NPANDDQAMARVWRDGQKKKAIFDLLLQVFIYRLLSTGTIEEKIFQRQAHKKALSSCVVD 660 Query: 197 ALK 199 + Sbjct: 661 EEE 663 >gi|212542839|ref|XP_002151574.1| chromodomain helicase (Chd1), putative [Penicillium marneffei ATCC 18224] gi|210066481|gb|EEA20574.1| chromodomain helicase (Chd1), putative [Penicillium marneffei ATCC 18224] Length = 1497 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 76/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEK------------- 46 ++ Y + Y L +G N + + + ++ + +N + + Sbjct: 686 LEYYKNILTKNYAALNEGANGQKQSLLNIMMELKKASNHPFMFPNAEAKLLEGNTRREDL 745 Query: 47 -HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 746 LRIMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGDYMRFRGYQYQRLDGTIS 805 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N + + G G+NL + ++ F W+ + + Sbjct: 806 AANRRVAMEHFNAPESSDFAFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQ 859 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++TI+E VL+R R K + Sbjct: 860 AMARAHRIGQTRPVSVYRLVSKDTIEEEVLERARNKLML 898 >gi|115462129|ref|NP_001054664.1| Os05g0150300 [Oryza sativa Japonica Group] gi|54291826|gb|AAV32194.1| putative ATPase [Oryza sativa Japonica Group] gi|113578215|dbj|BAF16578.1| Os05g0150300 [Oryza sativa Japonica Group] gi|222630218|gb|EEE62350.1| hypothetical protein OsJ_17139 [Oryza sativa Japonica Group] Length = 1158 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 77/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYD--EEKHWKEVHDEKI 56 + Q++ Y L +++E N+ + ++ + N + E D I Sbjct: 523 EMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 582 Query: 57 KALEVIIEKAN--------AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + ++ + +++ L L+ Sbjct: 583 ENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRD 642 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL ++++ + W+ + ++ R Sbjct: 643 ASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 696 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 697 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGR 739 >gi|158293531|ref|XP_557901.3| AGAP008748-PA [Anopheles gambiae str. PEST] gi|157016752|gb|EAL40287.3| AGAP008748-PA [Anopheles gambiae str. PEST] Length = 789 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 70/217 (32%), Gaps = 42/217 (19%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEE------------------------KHWKEV 51 + + + S +L N E+ + Sbjct: 426 KNATKASLTALSNITSLKKLCNHPDLVYEKIQERADGFENAATILPDNYSPRELRPELGA 485 Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 + + I+ I++ ++ L +K + T+ K + Sbjct: 486 KLMLLDCMLASIKTNTTDKIVLVSNYTQTLDLFEKLCRKRGYGYVRLDGTMTIKKRGKVV 545 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++N+ + + G GLNL G N LV F W+ + + R + Sbjct: 546 DQFNQPDSADFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN-----DEQAMARVWRD 599 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ F+Y L+A TI+E + QR K + +++ Sbjct: 600 GQKKPCFIYRLLATGTIEEKIFQRQTHKKALSTTVVD 636 >gi|67467805|ref|XP_649984.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica HM-1:IMSS] gi|56466523|gb|EAL44598.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 1247 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 72/225 (32%), Gaps = 37/225 (16%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYD---------------E 44 + Y + L + N + ++ ++ N + Sbjct: 550 QYYRALYEKNREFLNKGCVGSNVPNLQNLMMQLRKVCNHPYLIPGVEEKDTAQFPEGSPD 609 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 + K+ L+ ++ K A+ +++ L ++K + Sbjct: 610 YFNQLIRSSGKLVLLDKLLPKLYADHHKVLIFSQLKKVLNIIEKYLKYKGYFYERLDGSI 669 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I + ++ + + G G+NL + ++ F W+ + + Sbjct: 670 KSEDRQNAIDRFMNPEMNRFIFLLCTRAGGFGINL-SEADTVIIFDSDWNPQN-----DL 723 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G K+ V VY L+++NT + + +R K + +L Sbjct: 724 QAQARCHRIGQKKEVKVYRLVSKNTYERYMFERASMKLGLDQAVL 768 >gi|311256289|ref|XP_003126577.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Sus scrofa] Length = 1912 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 984 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1043 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1044 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1103 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1104 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1157 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1158 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1199 >gi|291392737|ref|XP_002712922.1| PREDICTED: chromodomain helicase DNA binding protein 4-like isoform 1 [Oryctolagus cuniculus] Length = 1905 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 977 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1036 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1037 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1096 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1097 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1150 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1151 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1192 >gi|303324465|ref|XP_003072220.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240111930|gb|EER30075.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320037260|gb|EFW19198.1| chromodomain helicase hrp1 [Coccidioides posadasii str. Silveira] Length = 1520 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 74/219 (33%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y + Y L G + + + ++ + +N + + Sbjct: 708 LEYYKNILTKNYAALNQGAKGQKQSLLNIMMELKKASNHPFMFANAEDRILQGSTRREDA 767 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 768 LRALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMVRMLDILADYMDARGFAYQRLDGTIA 827 Query: 98 ----PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + G G+NL + ++ F W+ + + Sbjct: 828 AGPRRLSIEHFNAPDSTDFAFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQ 881 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++T++E V++R R K + Sbjct: 882 AMARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLL 920 >gi|47213811|emb|CAF92584.1| unnamed protein product [Tetraodon nigroviridis] Length = 1683 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + + H Sbjct: 1071 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFS 1130 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 K + L+ I+ K A +++ S + ++ F Sbjct: 1131 GGIVQGPDLYRASGKFEVLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRL 1190 Query: 96 -------KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +N+ + + + G GLNLQ + +V F W+ + Sbjct: 1191 DGTTKAEDRGMLLKTFNDPESEYFIFLLSTRAGGLGLNLQS-ADTVVIFDSDWNPHQ--- 1246 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L ++++E +L + K + ++ A Sbjct: 1247 --DLQAQDRAHRIGQQNEVRVLRLCTVSSVEEKILAAAKYKLNVDQKVIQA 1295 >gi|323348699|gb|EGA82941.1| Ino80p [Saccharomyces cerevisiae Lalvin QA23] Length = 1374 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K++ L+ ++ K + +++ + + +++ + + Sbjct: 1183 SAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 1242 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1243 VHDWQTNPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1296 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V VY L+ + TI+E + R + K +Q +++ +E Sbjct: 1297 GQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQE 1338 >gi|301616286|ref|XP_002937591.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Xenopus (Silurana) tropicalis] Length = 1906 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 65/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + + Sbjct: 950 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGN 1009 Query: 48 WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1010 SLVKSSGKLMLLQKMLKKLKDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1069 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1070 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1123 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1124 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1165 >gi|30694618|ref|NP_191289.2| INO80 (INO80 ORTHOLOG); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|238065083|sp|Q8RXS6|INO80_ARATH RecName: Full=DNA helicase INO80 complex homolog 1; Short=AtINO80 Length = 1507 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 71/198 (35%), Gaps = 21/198 (10%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANA 68 L ++ E + T + + K++ L++++++ A Sbjct: 1165 LIQEIDSELPVVQPALQLTHRIFGSC--PPMQSFDPAKLLTDSGKLQTLDILLKRLRAGN 1222 Query: 69 APIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +++ L L+ +D+ + I + Sbjct: 1223 HRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTR 1282 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + ++F+ W+ + + R + G + V VY LI + T++ Sbjct: 1283 AGGLGINLTA-ADTVIFYESDWNPTL-----DLQAMDRAHRLGQTKDVTVYRLICKETVE 1336 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L R K+T+Q L++ Sbjct: 1337 EKILHRASQKNTVQQLVM 1354 >gi|190347873|gb|EDK40225.2| hypothetical protein PGUG_04323 [Meyerozyma guilliermondii ATCC 6260] Length = 1367 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 72/211 (34%), Gaps = 40/211 (18%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-----------------VHDEKIKAL 59 G I N ++ K +N +D + + K+ L Sbjct: 592 GSQISLLNVMAELKK---ASNHPYLFDGAEERVLGTSTSSANRESVLRGMIMSSGKMVLL 648 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 E ++ + +++ L L G + +I +N Sbjct: 649 EQLLTRLRKEGHRVLIFSQMVRMLDILGDYLSIKGYAFQRLDGGIPSSQRRISIDHFNAP 708 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G G+NL + ++ F W+ + + + R + G K V Sbjct: 709 DSRDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQAMARAHRIGQKNHV 762 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY ++++TI+E +L+R R K ++ +++ Sbjct: 763 SVYRFVSKDTIEEEILERARKKMILEYAIIS 793 >gi|281200598|gb|EFA74816.1| chromo domain-containing protein [Polysphondylium pallidum PN500] Length = 2720 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 72/233 (30%), Gaps = 39/233 (16%) Query: 4 YHKFQRELYCDLQGENIEAFN--SASKTV-KCLQLANGAVYYDEEKHWKEV--------- 51 Y + L N + + + ++ N + Sbjct: 1065 YRAILEKNREFLARGVKSKSNLPKLTNIMIQIRKVCNHPFLILGAEDTIIRQEKLKTEEQ 1124 Query: 52 -------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 K+ ++ +++ KA +++ L L+ L + Sbjct: 1125 ISELLIRSSSKLVLVDKLLQRLKAEGHKVLIFSQMVESLNILEDYLHYREYLYERLDGSV 1184 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +I+ + + + + S G G+NL + ++ F W+ + + Sbjct: 1185 KSEVRQASIERFMDKESDRFVFLLSTRSGGVGINLTS-ADTVILFDSDWNPQS-----DL 1238 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G V VY LI +NT ++ + + K + ++LN K + Sbjct: 1239 QAQARCHRIGQTSNVKVYRLITRNTYEQYLFEVATKKLLLDHIVLNNAKNNPM 1291 >gi|149049422|gb|EDM01876.1| chromodomain helicase DNA binding protein 4, isoform CRA_e [Rattus norvegicus] Length = 940 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 36 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 95 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 96 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 155 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 156 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 209 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 210 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 251 >gi|149238896|ref|XP_001525324.1| hypothetical protein LELG_03252 [Lodderomyces elongisporus NRRL YB-4239] gi|206558165|sp|A5E0W5|INO80_LODEL RecName: Full=Putative DNA helicase ino80 gi|146450817|gb|EDK45073.1| hypothetical protein LELG_03252 [Lodderomyces elongisporus NRRL YB-4239] Length = 1575 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K+ L+ ++ K +++ + + +++ + + Sbjct: 1310 SGKLAKLDELLVKLKQEDHRVLIYFQMTKMMDLMEEYLTFKQHKYIRLDGSSKLDDRRDL 1369 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +I + + G G+NL + +VF+ W+ I+ + R + Sbjct: 1370 VHDWQTKPEIFVFLLSTRAGGLGINLTA-ADTVVFYDSDWNPT-----IDSQAMDRAHRL 1423 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ +NTI+E + R + K +Q +++ Sbjct: 1424 GQTRQVTVYRLLTRNTIEERMRDRAKQKEQVQQVVMEG 1461 >gi|313226776|emb|CBY21921.1| unnamed protein product [Oikopleura dioica] Length = 1356 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 74/184 (40%), Gaps = 17/184 (9%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 + +Q G + + ++++ + +I + V F S A Sbjct: 942 TRLIQYDCGKLQTLHDLIYQKL---RPNGHRALIFTQMTKMLDVLERFLSYHALTYSRLD 998 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +K ++ +N + KI + S G G+NL G + ++F+ W+ I Sbjct: 999 GSTAPEKRIQIMETFNRDPKIFCMILSTRSGGVGVNLT-GADTVIFYDSDWNPT-----I 1052 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-------LKKE 201 + R + G R V +Y IA++TI+E +L++ K + ++ + LK++ Sbjct: 1053 DAQAQDRAHRIGQTRDVHIYRFIAKDTIEENILKKANYKRKLGNVAIEEGRFNIEGLKED 1112 Query: 202 TIHV 205 + V Sbjct: 1113 QLRV 1116 >gi|159130340|gb|EDP55453.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus fumigatus A1163] Length = 1374 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 74/207 (35%), Gaps = 34/207 (16%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA-- 69 +L+ E + N SK +L V KI+ I+++ Sbjct: 1044 LAELKKE--ASKNIKSKQKYLRRL-----------EKTWVTSAKIEKTLEILQEIQDRED 1090 Query: 70 --PIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 I+ F + L ++ R D++ ++ + ++ Sbjct: 1091 SEKTIIFSQFTALLDLLEVPIVRRGWGYRRYDGSMRPGDRNAAVLEFTDNPDCKIMLVSL 1150 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLNL + ++ F +W+ IE + R + G R V ++ ++ Q T+ Sbjct: 1151 KAGNAGLNLVA-ASQVIIFDPFWNP-----YIEDQAIDRAHRIGQMRQVHIHRILVQKTV 1204 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETI 203 ++ +L+ K I D L+ ++ + Sbjct: 1205 EDRILELQEKKREIIDGALDEKAQKKV 1231 Score = 39.0 bits (89), Expect = 0.39, Method: Composition-based stats. Identities = 3/54 (5%), Positives = 8/54 (14%), Gaps = 6/54 (11%) Query: 3 QYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 Y + + N ++ Q + Sbjct: 821 IYDALESKTQVQFNKYLKANAVGRNYSNILVLLLRLRQACCHPHLMTDFSVEVN 874 >gi|73997446|ref|XP_867915.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 24 [Canis familiaris] Length = 1892 Score = 91.0 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 964 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1023 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1024 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1083 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1084 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1137 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1138 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1179 >gi|224100361|ref|XP_002311847.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222851667|gb|EEE89214.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 670 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 76/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q++ Y L +++E N+ + ++ + N + Sbjct: 449 QMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV 508 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ Sbjct: 509 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLIFSGHQYCRIDGNTGGEDRD 568 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I +N + G G+NL ++++ + W+ + ++ R Sbjct: 569 ASIDAFNRPGSEKFCFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 622 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 623 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGR 665 >gi|332026198|gb|EGI66340.1| Chromodomain-helicase-DNA-binding protein 1 [Acromyrmex echinatior] Length = 1821 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 68/222 (30%), Gaps = 38/222 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE- 60 K Y ++ G + ++ + N A +E +E Sbjct: 701 KNYEALRK-------GVKGSTTTFLNIVIELKKCCNHAFLTKPMDAEREKTNEDYLQQLI 753 Query: 61 ------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DP 98 ++ + +++ L L + + + Sbjct: 754 RGSGKLVLLDKLLVRLRDTGHRVLIFSQMVRMLDILGEYLQRRHFPFQRLDGSIKGELRK 813 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL + ++ F W+ + + R Sbjct: 814 QALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQARA 867 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ + +++E +++R + K + L++ + Sbjct: 868 HRIGQKNKVNIYRLVTKKSVEEEIVERAKQKMVLDHLVIQRM 909 >gi|326912771|ref|XP_003202720.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Meleagris gallopavo] Length = 1922 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 985 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1044 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1045 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1104 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1105 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1158 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1159 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1200 >gi|242824408|ref|XP_002488252.1| SNF2 family helicase/ATPase (Swr1), putative [Talaromyces stipitatus ATCC 10500] gi|218713173|gb|EED12598.1| SNF2 family helicase/ATPase (Swr1), putative [Talaromyces stipitatus ATCC 10500] Length = 1663 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 65/189 (34%), Gaps = 35/189 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ + ++ Sbjct: 1336 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRELQAGGHRALIFTQMTK 1379 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYG 128 L L++ + +N I S G G+NL G Sbjct: 1380 MLDILEQFLNIHGHRYLRLDGTTKVEQRQMLTDRFNNDNRILAFILSTRSGGLGINLT-G 1438 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1439 ADSVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEFTIESNILRKANQKR 1493 Query: 189 TIQDLLLNA 197 + D+++ Sbjct: 1494 MLDDVVIQE 1502 >gi|26340418|dbj|BAC33872.1| unnamed protein product [Mus musculus] Length = 1081 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 721 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 780 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 781 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 840 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 841 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 894 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 895 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 938 >gi|70992713|ref|XP_751205.1| SWI/SNF family DNA-dependent ATPase Ris1 [Aspergillus fumigatus Af293] gi|66848838|gb|EAL89167.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus fumigatus Af293] Length = 1376 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 74/207 (35%), Gaps = 34/207 (16%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA-- 69 +L+ E + N SK +L V KI+ I+++ Sbjct: 1046 LAELKKE--ASKNIKSKQKYLRRL-----------EKTWVTSAKIEKTLEILQEIQDRED 1092 Query: 70 --PIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 I+ F + L ++ R D++ ++ + ++ Sbjct: 1093 SEKTIIFSQFTALLDLLEVPIVRRGWGYRRYDGSMRPGDRNAAVLEFTDNPDCKIMLVSL 1152 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLNL + ++ F +W+ IE + R + G R V ++ ++ Q T+ Sbjct: 1153 KAGNAGLNLVA-ASQVIIFDPFWNP-----YIEDQAIDRAHRIGQMRQVHIHRILVQKTV 1206 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETI 203 ++ +L+ K I D L+ ++ + Sbjct: 1207 EDRILELQEKKREIIDGALDEKAQKKV 1233 Score = 39.0 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 3/54 (5%), Positives = 8/54 (14%), Gaps = 6/54 (11%) Query: 3 QYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 Y + + N ++ Q + Sbjct: 821 IYDALESKTQVQFNKYLKANAVGRNYSNILVLLLRLRQACCHPHLMTDFSVEVN 874 >gi|317156009|ref|XP_001825512.2| helicase swr1 [Aspergillus oryzae RIB40] Length = 1662 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 67/179 (37%), Gaps = 11/179 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + K + D K +I + + F + Sbjct: 1331 RLSIAFPDKRLLQYDCGKLQRLD----KLLRDLKAGGHRALIFTQMTKMLDILEQFLNIH 1386 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N +I S G G+NL G + ++F+ L W+ Sbjct: 1387 GHRYLRLDGTTKVEQRQILTDRFNNDSRILAFILSSRSGGLGINLT-GADTVIFYDLDWN 1445 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y +++ TI+ +L++ K + D+++ + Sbjct: 1446 PA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQEGE 1499 >gi|223460528|gb|AAI36645.1| SMARCA4 protein [Homo sapiens] Length = 1681 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 1071 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1130 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1131 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1190 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1191 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 1246 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1247 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1295 >gi|150864264|ref|XP_001383014.2| DNA ATP-dependent helicase [Scheffersomyces stipitis CBS 6054] gi|149385520|gb|ABN64985.2| DNA ATP-dependent helicase [Scheffersomyces stipitis CBS 6054] Length = 1269 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 61/157 (38%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCT 100 K+ L+ ++ + N +++ + + +++ + + Sbjct: 1032 GKLAKLDELLVELKQNDHRVLIYFQMTRMMDLMEEYLTYRQHKYIRLDGSSKLDDRRDLV 1091 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +I + + G G+NL + ++F+ W+ I+ + R + G Sbjct: 1092 HDWQTKPEIFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRLG 1145 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1146 QTRQVTVYRLLTRGTIEERMRDRAKQKEQVQQVVMEG 1182 >gi|156552758|ref|XP_001599976.1| PREDICTED: similar to ENSANGP00000008413 [Nasonia vitripennis] Length = 1890 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 74/261 (28%), Gaps = 73/261 (27%) Query: 3 QYHKFQ-RELYCDLQGENIE---AFNSASKTVKCLQLANGAVYYDEEKHWKE-------- 50 Y F+ + + + + + N KH + Sbjct: 1555 LYEDFKQKHSAALINNASSSNPHGGHVFEALRYLRNVCNHPKLVLCTKHPQYQTVMNMLK 1614 Query: 51 ---------VHDEKIKALEVIIEKA--------------------------------NAA 69 H K+ AL+ ++ + Sbjct: 1615 QQHSSLADIEHSAKLPALKQLLLDCGIGQNSTQQQQQQTAARNTANITESQQQSQLVSQH 1674 Query: 70 PIIVAYHFNSDLARLQK----AFPQGRTLDK---------DPCTIQEWN-EGKIPLLFAH 115 ++ + L ++ T + + +N + I +L Sbjct: 1675 RALIFCQLKAMLDIVEHDLLRMHLPTVTYLRLDGSVPAALRHSVVARFNADPSIDVLLLT 1734 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G GLNL G + ++F W+ M + + R + G K+ V VY LI + T Sbjct: 1735 TQVGGLGLNLT-GADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRQT 1788 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E ++ + K + +++ Sbjct: 1789 VEEKIMGLQKFKLLTANTIIS 1809 >gi|302819699|ref|XP_002991519.1| hypothetical protein SELMODRAFT_429809 [Selaginella moellendorffii] gi|300140721|gb|EFJ07441.1| hypothetical protein SELMODRAFT_429809 [Selaginella moellendorffii] Length = 1426 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 66/170 (38%), Gaps = 19/170 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------ 90 + + K++AL+++ + A ++V L L+ Sbjct: 1119 PPLQTIDFARTLMDSGKLQALDILFRRLRAEEHRVLVFAQMTKMLNILEDYMKYRKYKYL 1178 Query: 91 -----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +D+ + I + + G G+NL + ++F+ W+ Sbjct: 1179 RLDGSSTIMDRRDMVKDFQHRSDIFVFLLSTRAGGLGINLTA-ADTVIFYESDWNPT--- 1234 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ + R + G + V VY LI + T++E +++R K+T+Q L++ Sbjct: 1235 --MDLQAMDRAHRLGQTKEVTVYRLICKGTVEEKIVKRANQKNTVQQLVM 1282 >gi|194211609|ref|XP_001496418.2| PREDICTED: chromodomain helicase DNA binding protein 4 [Equus caballus] Length = 1912 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 984 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1043 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1044 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1103 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1104 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1157 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1158 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1199 >gi|74200625|dbj|BAE24713.1| unnamed protein product [Mus musculus] Length = 1261 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 806 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 865 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 866 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 925 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 926 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 981 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 982 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1030 >gi|145522682|ref|XP_001447185.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414685|emb|CAK79788.1| unnamed protein product [Paramecium tetraurelia] Length = 1508 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 71/225 (31%), Gaps = 38/225 (16%) Query: 3 QYHKFQRELYCDLQGENIE-AFNSASKTV---KCLQLANGAVYYDEEKHWKEV------- 51 Y L+ + A N+AS + + N E ++ Sbjct: 664 IYKALYERNKSMLEQGFSQWAANAASLNNLEIQLRKCCNHPYLIQEMQNDLTKECQNKND 723 Query: 52 -------HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK------ 96 K+ L+ ++ K +++ F L+ L++ + + Sbjct: 724 YINKLVESSGKMILLDKLLNKFRNEGKKMLIFSQFTMMLSILEEYLKFRQVKYEKIDGQI 783 Query: 97 ----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I +N+ + + G G+NL I+V + W+ + + Sbjct: 784 KARERQNAIDRFNDPSKKREVFLLSTKAGGQGINLTA-AEIVVIYDSDWNPQN-----DV 837 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + V VY LI ++T + + +R K + + Sbjct: 838 QATARAHRIGQSKEVTVYRLITKDTYEAEMFERAIKKLGLDQAIF 882 >gi|224128974|ref|XP_002320469.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222861242|gb|EEE98784.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 265 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPAS 118 IV F S L + + + +D + + + + Sbjct: 114 KGIVFSQFTSFLDLIHYSLQKSGISCVQLVGSMSLAARDAAIKRFAEDPDCKIFLMSLKA 173 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ +ER R + G + + + + +NT++E Sbjct: 174 GGVALNLT-VASHVFLMDPWWNPA-----VERQAQDRIHRIGQYKPIRIVRFVIENTVEE 227 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +LQ K + + + Sbjct: 228 RILQLQEKKELVFEGTVGG 246 >gi|207345617|gb|EDZ72381.1| YFR038Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 853 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 83/220 (37%), Gaps = 36/220 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------VHD 53 K Y ++ L ++ + ++ + ++ Q+ + + E Sbjct: 551 KLY---KKNLQMEISNKKLQ-----NMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLKTS 602 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTI 101 K++ L+ +I + +++ F + L ++ + + + Sbjct: 603 GKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVSNETRKDQL 662 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++N K + + G G+NL G + +V F W+ + ++ + R + Sbjct: 663 EKFNSSKDKHNIFLLSTRAAGLGINL-VGADTVVLFDSDWNPQ-----VDLQAMDRCHRI 716 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V VY L NTI+ ++L R K ++ +++ K Sbjct: 717 GQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGK 756 >gi|73997448|ref|XP_534909.2| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 1 [Canis familiaris] Length = 1912 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 984 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1043 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1044 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1103 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1104 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1157 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1158 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1199 >gi|298709602|emb|CBJ49249.1| similar to E1a binding protein P400 (Partial) [Ectocarpus siliculosus] Length = 2819 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 56/144 (38%), Gaps = 17/144 (11%) Query: 65 KANAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK---------DPCTIQEWN-EGKIPLLF 113 K ++ + L + G T + + +N + K+ Sbjct: 1706 KQGGHKCLIFTQMSRMLDVLEEFLTLHGHTYVRLDGSTGVEKRQRLMDRFNLDPKLFCFI 1765 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 S G G+NL G + ++F+ W+ ++ R + G R V +Y L+ Sbjct: 1766 LSTRSGGLGINLT-GADTVIFYDSDWNPA-----MDAQAQDRAHRIGQTREVHIYRLVTS 1819 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 ++I+E +L++ + K + L++ A Sbjct: 1820 SSIEENILKKAQQKRHLDFLVMTA 1843 >gi|193785938|dbj|BAG54725.1| unnamed protein product [Homo sapiens] Length = 1886 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 958 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1017 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1018 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1077 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1078 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1131 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1132 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1173 >gi|151940802|gb|EDN59189.1| conserved protein [Saccharomyces cerevisiae YJM789] Length = 853 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 82/220 (37%), Gaps = 36/220 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------VHD 53 K Y ++ L ++ + ++ + ++ Q+ + + E Sbjct: 551 KLY---KKNLQMEISNKKLQ-----NMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLKTS 602 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTI 101 K++ L+ +I + +++ F + L ++ + + Sbjct: 603 GKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQL 662 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++N K + + G G+NL G + +V F W+ + ++ + R + Sbjct: 663 EKFNSSKDKHNIFLLSTRAAGLGINL-VGADTVVLFDSDWNPQ-----VDLQAMDRCHRI 716 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V VY L NTI+ ++L R K ++ +++ K Sbjct: 717 GQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGK 756 >gi|58265682|ref|XP_569997.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21] gi|57226229|gb|AAW42690.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 993 Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 11/156 (7%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-DPCTIQEWNEGKI 109 +H E ++ +N + L R G T K + +N+ K Sbjct: 612 LHSIYQCTEEKVVVVSNWTSTLDLIQGLCKLKRYNYLRLDGSTPPKQRQELVDRFNKDKG 671 Query: 110 P----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL GG+ L+ F W+ + + R + G KR V Sbjct: 672 RQESFVFLLSAKAGGVGLNL-IGGSRLILFDSDWNPST-----DLQAMARIHRDGQKRPV 725 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++Y + N IDE + QR TK+ + D +++ + E Sbjct: 726 YIYRFLTTNAIDEKIYQRQITKTGLSDQMMDQTRTE 761 >gi|238498954|ref|XP_002380712.1| SNF2 family helicase/ATPase (Swr1), putative [Aspergillus flavus NRRL3357] gi|220693986|gb|EED50331.1| SNF2 family helicase/ATPase (Swr1), putative [Aspergillus flavus NRRL3357] Length = 1662 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 67/179 (37%), Gaps = 11/179 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + K + D K +I + + F + Sbjct: 1331 RLSIAFPDKRLLQYDCGKLQRLD----KLLRDLKAGGHRALIFTQMTKMLDILEQFLNIH 1386 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N +I S G G+NL G + ++F+ L W+ Sbjct: 1387 GHRYLRLDGTTKVEQRQILTDRFNNDSRILAFILSSRSGGLGINLT-GADTVIFYDLDWN 1445 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y +++ TI+ +L++ K + D+++ + Sbjct: 1446 PA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQEGE 1499 >gi|194389146|dbj|BAG61590.1| unnamed protein product [Homo sapiens] Length = 715 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 243 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 302 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 303 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 362 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 363 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 418 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 419 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 467 >gi|221053502|ref|XP_002258125.1| atp-dependant helicase [Plasmodium knowlesi strain H] gi|193807958|emb|CAQ38662.1| atp-dependant helicase, putative [Plasmodium knowlesi strain H] Length = 1759 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 40/206 (19%) Query: 20 IEAFNSASKTVKCLQLANG--AVYY-------------------DEEKHWKEVHDEKIKA 58 I + + + LQ + + + + K+ A Sbjct: 1277 ISSSHRIAVNNNLLQNCSHLEPILHRIKIATRVYHEPFHKQSIIFPLNKDITLGSGKLFA 1336 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 LE ++ K ++ F L L+ +++ + ++N Sbjct: 1337 LEKLLNKCKREGNKCLLFTQFIKMLDILEIFLNHLNYTFIRLDGSTKVEQRQKIVTKFNN 1396 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K I L + S G+NL N+++F+ W+ I++ + R + G + V Sbjct: 1397 DKSIFLFISSTRSGSIGINLTA-ANVVIFYDTDWNPS-----IDKQAMDRCHRIGQTKDV 1450 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQ 191 V+ + + T++E + ++ K + Sbjct: 1451 HVFRFVCEYTVEENIWKKQLQKRKLD 1476 >gi|159124373|gb|EDP49491.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163] Length = 1141 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 61/169 (36%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 + + + KI+ L I+ +A IV F S L +++ + Sbjct: 891 LNPGDNETQVLPSTKIRHLMKILRREAADYKFIVFSVFTSMLDKIEPFLKRAGIGFARYD 950 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 R ++ + + +L + GLNL + +V +W+ + Sbjct: 951 GSMRNDLREASLDKLRHNSATRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FV 1004 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E + R + V +Y +I + T++E +L+ K + +L + Sbjct: 1005 EEQAIDRVHRLNQTVDVKIYKMIIKETVEERILELQDRKRELANLTIEG 1053 Score = 40.1 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 15/46 (32%), Gaps = 4/46 (8%) Query: 1 MKQYHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYY 42 M Y + ++ L+ G ++ + ++ Q N Sbjct: 643 MNFYKRLEQRTENSLEKMMGGSKVDYAGALVLLLRLRQACNHPDLV 688 >gi|70991923|ref|XP_750810.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293] gi|66848443|gb|EAL88772.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293] Length = 1141 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 61/169 (36%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 + + + KI+ L I+ +A IV F S L +++ + Sbjct: 891 LNPGDNETQVLPSTKIRHLMKILRREAADYKFIVFSVFTSMLDKIEPFLKRAGIGFARYD 950 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 R ++ + + +L + GLNL + +V +W+ + Sbjct: 951 GSMRNDLREASLDKLRHNSATRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FV 1004 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E + R + V +Y +I + T++E +L+ K + +L + Sbjct: 1005 EEQAIDRVHRLNQTVDVKIYKMIIKETVEERILELQDRKRELANLTIEG 1053 Score = 40.1 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 15/46 (32%), Gaps = 4/46 (8%) Query: 1 MKQYHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYY 42 M Y + ++ L+ G ++ + ++ Q N Sbjct: 643 MNFYKRLEQRTENSLEKMMGGSKVDYAGALVLLLRLRQACNHPDLV 688 >gi|67904180|ref|XP_682346.1| hypothetical protein AN9077.2 [Aspergillus nidulans FGSC A4] gi|74680483|sp|Q5ARK3|SWR1_EMENI RecName: Full=Helicase swr1 gi|40742720|gb|EAA61910.1| hypothetical protein AN9077.2 [Aspergillus nidulans FGSC A4] Length = 1656 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 66/179 (36%), Gaps = 11/179 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + K + D K +I + V F + Sbjct: 1315 RLSIAFPDKRLLQYDCGKLQRLD----KLLRDLKAGGHRALIFTQMTKMLDVLEQFLNIH 1370 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N I S G G+NL G + ++F+ L W+ Sbjct: 1371 GHRYLRLDGTTKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLT-GADTVIFYDLDWN 1429 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y +++ TI+ +L++ K + D+++ + Sbjct: 1430 PA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQEGE 1483 >gi|328867660|gb|EGG16042.1| myb domain-containing protein [Dictyostelium fasciculatum] Length = 1999 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/237 (11%), Positives = 72/237 (30%), Gaps = 46/237 (19%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 K Y + + L+ + + + ++ + N + + Sbjct: 711 KYYRAIYEKNFSFLRKGG-KGPSLLNIMMELRKCCNHPYLIKGAEKSEMADLQIKNGVTA 769 Query: 53 ----------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 K+ ++ ++ K A +++ L L Sbjct: 770 AGKSAQDAVYERLIQSSGKLVLVDKLLPKLRAGGHKVLIFSQMVMVLDILDDYLTYRGYP 829 Query: 95 DKD----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + I +++ + + G G+NL + ++ F W+ + Sbjct: 830 HERIDGSIKGNDRQAAIDRFSKKGSDSFVFLLCTKAGGIGINLTA-ADTVIIFDSDWNPQ 888 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G + V VY L+ +NT ++++ R K ++ ++L + Sbjct: 889 N-----DLQAQARCHRIGQDKMVKVYRLVTRNTYEKIMFDRASKKLSLDKVVLTKMN 940 >gi|291392739|ref|XP_002712923.1| PREDICTED: chromodomain helicase DNA binding protein 4-like isoform 2 [Oryctolagus cuniculus] Length = 1912 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 984 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1043 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1044 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1103 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1104 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1157 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1158 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1199 >gi|302496981|ref|XP_003010491.1| hypothetical protein ARB_03192 [Arthroderma benhamiae CBS 112371] gi|291174034|gb|EFE29851.1| hypothetical protein ARB_03192 [Arthroderma benhamiae CBS 112371] Length = 1504 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 74/218 (33%), Gaps = 34/218 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEK 46 ++ Y + Y L G + + ++ + +N + +++ Sbjct: 681 LELYKNILTKNYDALNHGGKGPKPSLLNIMMELKKASNHPFMFWGPEEQAGGSTRREDQL 740 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 K+ L+ ++ K + +++ L L + Sbjct: 741 KALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGFNYQRLDGTIAA 800 Query: 98 ---PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I+ +N + G G+NL + ++ F W+ + + Sbjct: 801 GPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQA 854 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++T++E VL+R R K + Sbjct: 855 MARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLL 892 >gi|73997420|ref|XP_867825.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 12 [Canis familiaris] Length = 1925 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 977 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1036 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1037 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1096 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1097 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1150 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1151 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1192 >gi|254585925|ref|XP_002498530.1| ZYRO0G12474p [Zygosaccharomyces rouxii] gi|238941424|emb|CAR29597.1| ZYRO0G12474p [Zygosaccharomyces rouxii] Length = 901 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 76/216 (35%), Gaps = 35/216 (16%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK--------------EVHDEKIKA 58 ++ + + +S + ++ N + ++K E + K++ Sbjct: 546 ANIDLQRLNFNSSLALITLLKKICNSPTLIQTDSYYKSSMQNSRISQKYQNEYNSGKLRV 605 Query: 59 LEVIIE----KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEW 104 L ++ + + ++V ++ L ++ + + + Sbjct: 606 LMKLLNQIKIETTSDKVVVISNYTQTLDIIENLMASAGMSSCRLDGSTPAKQRDAIVNNF 665 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N I S G GLNL G L+ F W+ ++ ++R + G K+ Sbjct: 666 NHNPSIFAFLLSAKSGGVGLNL-IGACRLILFDNDWNPS-----VDLQAMSRIHRDGQKK 719 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++Y L+ IDE +LQR K+ + L+ K Sbjct: 720 PCYIYRLVTTGCIDEKILQRQLMKNCLSQKFLSDTK 755 >gi|156839119|ref|XP_001643254.1| hypothetical protein Kpol_1063p6 [Vanderwaltozyma polyspora DSM 70294] gi|156113856|gb|EDO15396.1| hypothetical protein Kpol_1063p6 [Vanderwaltozyma polyspora DSM 70294] Length = 849 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 80/217 (36%), Gaps = 36/217 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------HD 53 K Y + ++ +L+ + ++ + ++ Q+ + + E Sbjct: 547 KIYEE---YMHAELKNKKLQ-----NMMMQLRQIVDSTFLFYFPYLNPEEMTLDVLLQTS 598 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTI 101 K++ ++ +I ++V F + L L+ + I Sbjct: 599 GKLQTMQDLILPLVKKKHKVLVFSQFTNMLDLLEDWCELNSLESFRIDGTIDSESRKEQI 658 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++N+ + + G G+NL + +V F W+ + ++ + R + Sbjct: 659 EQFNKPGDKHNIFLLSTRAAGLGINL-IAADTVVLFDSDWNPQ-----VDLQAMDRCYRI 712 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V VY L NT++ ++L R K ++ +++ Sbjct: 713 GQIKPVVVYRLCCDNTVEHVILTRAANKRKLEKMVIQ 749 >gi|297261645|ref|XP_001107252.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like isoform 8 [Macaca mulatta] Length = 1912 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 984 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1043 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1044 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1103 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1104 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1157 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1158 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1199 >gi|73997410|ref|XP_867787.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 7 [Canis familiaris] Length = 1766 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 857 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 916 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 917 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 976 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 977 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1030 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1031 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1072 >gi|46122747|ref|XP_385927.1| hypothetical protein FG05751.1 [Gibberella zeae PH-1] gi|84029506|sp|Q4IAK7|SWR1_GIBZE RecName: Full=Helicase SWR1 Length = 1691 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 35/183 (19%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA 87 + LQ G K++ L+ ++ K ++ L L++ Sbjct: 1363 KRLLQYDCG----------------KLQILDKLLRKLQAGGHRALIFTQMTKVLDILEQF 1406 Query: 88 FPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + +N + +I S G G+NL G + ++F+ Sbjct: 1407 LNIHGHKYLRLDGATKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLT-GADTVIFYD 1465 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ +++ R + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1466 QDWNPA-----MDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1520 Query: 197 ALK 199 + Sbjct: 1521 EGE 1523 >gi|156544560|ref|XP_001602612.1| PREDICTED: similar to chromodomain helicase DNA binding protein [Nasonia vitripennis] Length = 1837 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 74/224 (33%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 KQY+K + +G + ++ + N A ++ K ++E Sbjct: 689 KQYYKWILTKNFNALRKGNKGSTSTFLNIVIELKKCCNHAFLTKPNENEKRDNNEDYLQQ 748 Query: 60 E-------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 ++ K +++ L L + + + Sbjct: 749 LIRGSGKLVLLDKLLVRLKETGHRVLIFSQMVRMLDILSEYLQKRHFPFQRLDGSIKGEL 808 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + ++ F W+ + + Sbjct: 809 RKQALDHFNAPGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQA 862 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++++E +++R + K + L++ + Sbjct: 863 RAHRIGQKNQVNIYRLVTKSSVEEEIVERAKQKMVLDHLVIQRM 906 >gi|1345773|sp|P40201|CHD1_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1 gi|455015|gb|AAB08486.1| DNA-binding protein [Mus musculus] Length = 1711 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 721 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 780 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 781 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 840 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 841 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 894 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 895 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 938 >gi|114643071|ref|XP_508960.2| PREDICTED: chromodomain helicase DNA binding protein 4 isoform 3 [Pan troglodytes] Length = 1886 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 958 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1017 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1018 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1077 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1078 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1131 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1132 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1173 >gi|149636559|ref|XP_001513135.1| PREDICTED: similar to Chromodomain helicase DNA binding protein 1 [Ornithorhynchus anatinus] Length = 1807 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 724 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 783 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 784 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 843 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 844 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 897 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 898 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 941 >gi|331230613|ref|XP_003327971.1| SNF2 family ATP-dependent chromatin-remodeling factor snf22 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306961|gb|EFP83552.1| SNF2 family ATP-dependent chromatin-remodeling factor snf22 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1537 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 69/196 (35%), Gaps = 31/196 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHD-----------EKIKALEVIIEK--ANAAPIIVAY 75 ++ ++ N ++E + K + L+ ++ K +++ + Sbjct: 835 IMQLKKICNHPFTFEEVERTINGPHKPTNDTLWRAAGKFELLDRVLPKLFRTGHRVLMFF 894 Query: 76 HFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGL 123 + Q ++ ++ +N + I L + G GL Sbjct: 895 QMTQVMDIFQDYCAYRGIKNLRLDGMTKPEERAELLKTFNHPECGINLFILSTRAGGLGL 954 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K+ V V LI +++E ++ + Sbjct: 955 NLQT-ADTVIIFDSDWNPHQ-----DLQAQDRAHRIGQKKEVRVLRLITSKSVEEHIMSK 1008 Query: 184 LRTKSTIQDLLLNALK 199 + K + ++ A + Sbjct: 1009 AQFKLDMDKKVIQAGR 1024 >gi|289614871|emb|CBI58408.1| unnamed protein product [Sordaria macrospora] Length = 908 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K++AL +I + N +V F + L + + Sbjct: 713 CIRSFDLPDGSWMESAKVQALLKLIKQYQKNGDRALVFTRFAKVIEILGECLASEKIEYL 772 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + IP+ S G G+NL N ++ F + ++ Sbjct: 773 SLQGNTDVSERQELINEFNADATIPVFLLTTGSGGTGINLTA-ANKVIIFDQSDNPQD-- 829 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G R V + LI+++T++ELV + + K + + ++ Sbjct: 830 ---DIQAENRAHRLGQTRPVEIIRLISKDTVEELVYKACQKKLELANKVVG 877 >gi|256268827|gb|EEU04181.1| Irc5p [Saccharomyces cerevisiae JAY291] Length = 853 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 82/220 (37%), Gaps = 36/220 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------VHD 53 K Y ++ L ++ + ++ + ++ Q+ + + E Sbjct: 551 KLY---KKNLQMEISNKKLQ-----NMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLKTS 602 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTI 101 K++ L+ +I + +++ F + L ++ + + Sbjct: 603 GKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQL 662 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++N K + + G G+NL G + +V F W+ + ++ + R + Sbjct: 663 EKFNSSKDKHNIFLLSTRAAGLGINL-VGADTVVLFDSDWNPQ-----VDLQAMDRCHRI 716 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V VY L NTI+ ++L R K ++ +++ K Sbjct: 717 GQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGK 756 >gi|224058089|ref|XP_002191829.1| PREDICTED: RAD54-like (S. cerevisiae) [Taeniopygia guttata] Length = 757 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 83/234 (35%), Gaps = 45/234 (19%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y F ++ +L+ I + +S T +L N ++ +E Sbjct: 435 ELYKNFLKQAKPVEELKEGKISVSSLSSITSL-KKLCNHPALIYDKCVEEEEGFMGALGL 493 Query: 53 --------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L+ I+ + + +++ ++ L +K Sbjct: 494 FPSGYSTKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLFEKLCRSRRYLY 553 Query: 91 -----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 554 VRLDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN 612 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 613 -----DEQAMARVWRDGQKKMCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDE 661 >gi|302813585|ref|XP_002988478.1| hypothetical protein SELMODRAFT_128101 [Selaginella moellendorffii] gi|300143880|gb|EFJ10568.1| hypothetical protein SELMODRAFT_128101 [Selaginella moellendorffii] Length = 562 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 75/255 (29%), Gaps = 70/255 (27%) Query: 2 KQYHKFQRELYCDLQG------ENIEAFNSASKTVKCLQLANGAVYYD------------ 43 + Y + + + FN S ++ Q+ N D Sbjct: 285 ELYEDLMEKYEARISEYSSKGTLQMNKFNMLSMLLRLRQMCNHPALLDSDHLFQVEDDDL 344 Query: 44 -------------------------EEKHWKEVHDEKIKA----------LEVIIEKANA 68 E + +E D K++ + V+ + Sbjct: 345 IVDEDGSEDGSGHQQMREALSKLQLEAQERQEEFDRKVQEIGQSAKLKAAMMVLDMTPHG 404 Query: 69 APIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 ++ + S L ++ + K I+ + + ++ ++ Sbjct: 405 EKSLIFSQWTSMLDLIEPQLEEAGIQFSRIDGSMSTRKRVAAIKRFSEDPEVAVMLISLR 464 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL ++ +WW+ E + R + G R V V + + T++ Sbjct: 465 AGGCGLNLVA-ATRVLLMDMWWNPTT-----EDQAIDRTHRIGQTRPVHVTRFVVKETVE 518 Query: 178 ELVLQRLRTKSTIQD 192 E +LQ K + + Sbjct: 519 ERILQIQEEKKKLVE 533 >gi|145611352|ref|XP_368791.2| hypothetical protein MGG_00453 [Magnaporthe oryzae 70-15] gi|145018655|gb|EDK02934.1| hypothetical protein MGG_00453 [Magnaporthe oryzae 70-15] Length = 901 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 19/173 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 + E++ + V KI+ L I+ + + IV F S L + F + Sbjct: 679 FAHEENGRVVPSAKIRQLLEILHKEVHEHKFIVFSQFTSMLDLVAPFFDREGFKYTRYEG 738 Query: 91 -GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + ++ N+ K +L GLNL +V +W+ +E Sbjct: 739 SMKNDLREESLHSLRNDPKTRILLCSLKCGSLGLNLTA-ATRVVILEPFWNP-----FVE 792 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKE 201 + R + V VY L +++E +L+ K + + + +KK+ Sbjct: 793 EQAIDRVHRLTQTVDVIVYKLTVGKSVEERILELQNKKRMLAEQAIEGGMKKK 845 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 6/44 (13%), Positives = 14/44 (31%), Gaps = 3/44 (6%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 K Y++ + E + + N+ ++ Q N Sbjct: 394 KFYNRLEERADESLQRMMKGKVNYANALVLLLRLRQACNHPRLV 437 >gi|330793226|ref|XP_003284686.1| hypothetical protein DICPUDRAFT_53111 [Dictyostelium purpureum] gi|325085384|gb|EGC38792.1| hypothetical protein DICPUDRAFT_53111 [Dictyostelium purpureum] Length = 2666 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 69/232 (29%), Gaps = 39/232 (16%) Query: 4 YHKFQRELYCDLQGENIEAFN--SASKTV-KCLQLANGAVYYD----------------E 44 Y L N S + + ++ N E Sbjct: 914 YRAILERNREFLARGIRHKSNLPKLSNIMIQIRKVCNHPFLIPGAEESIVKQEKISGEDE 973 Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 K+ ++ +++ KA +++ L L+ + Sbjct: 974 LGELLVRSSSKLVLVDKLLQRLKAEGHQVLIFSQMVESLNILEDYLQYREYTYERLDGSI 1033 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +I + + + + + G G+NL + ++ F W+ + + Sbjct: 1034 KSEVRQASIDRFQDKEANRFVFLLSTRAGGVGINLTT-ADTVILFDSDWNPQS-----DL 1087 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G V VY LI +NT +E + + K + ++L+ K+ Sbjct: 1088 QAQARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKLLLDHIVLSTNNKKG 1139 >gi|302660586|ref|XP_003021971.1| hypothetical protein TRV_03919 [Trichophyton verrucosum HKI 0517] gi|291185893|gb|EFE41353.1| hypothetical protein TRV_03919 [Trichophyton verrucosum HKI 0517] Length = 1500 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 74/218 (33%), Gaps = 34/218 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY-------------DEEK 46 ++ Y + Y L G + + ++ + +N + +++ Sbjct: 681 LELYKNILTKNYDALNHGGKGPKPSLLNIMMELKKASNHPFMFWGPEEQAGGSTRREDQL 740 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 K+ L+ ++ K + +++ L L + Sbjct: 741 KALVTSSGKMMVLDQLLTKLKNDGHRVLIFSQMVRMLNILANYMDARGFNYQRLDGTIAA 800 Query: 98 ---PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I+ +N + G G+NL + ++ F W+ + + Sbjct: 801 GPRRLAIEHYNAPGSTDFTFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQA 854 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++T++E VL+R R K + Sbjct: 855 MARAHRIGQTKPVSVYRLVSKDTVEEEVLERARNKLLL 892 >gi|256052547|ref|XP_002569826.1| chromodomain helicase DNA binding protein [Schistosoma mansoni] gi|227284553|emb|CAY17238.1| chromodomain helicase DNA binding protein, putative [Schistosoma mansoni] Length = 1966 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 59/207 (28%), Gaps = 36/207 (17%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYD-------------EEKHWKEVHDEKIKALEVI 62 G + N + + N + E K++ + + Sbjct: 1070 GGSQVSLINI---MMDLKKCCNHPFLFPSAAEEAQRMPNGAYEGVGLRKGSGKLELMSKM 1126 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKI- 109 + K +++ L L+ + I +N Sbjct: 1127 LRKLYETKHRVLIFSQMTKMLDLLEDFLDSEGYKFERIDGAVTGQLRQDAIDRFNAPDSL 1186 Query: 110 -PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + G G+NL + ++ + W+ + +R + G V +Y Sbjct: 1187 SFAFLLSTRAGGLGINL-ASADTVIIYDSDWNP-----HNDIQAFSRAHRIGQSNKVMIY 1240 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 + + T++E V Q + K + L++ Sbjct: 1241 RFVTRGTVEERVTQVAKKKMMLTHLVV 1267 >gi|66813908|ref|XP_641133.1| myb domain-containing protein [Dictyostelium discoideum AX4] gi|60469158|gb|EAL67154.1| myb domain-containing protein [Dictyostelium discoideum AX4] Length = 2373 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 71/228 (31%), Gaps = 36/228 (15%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + + L G++ + + + ++ + N + + Sbjct: 765 KYYRAIYEKNFSFLRKGGKSNQGPSLLNIMMELRKCCNHPYLTKGVEQSETSSIKDKDQI 824 Query: 53 -------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ ++ ++ K +++ S L L + Sbjct: 825 FQKLIQASGKLVLIDKLLPKLKLGNHKVLIFSQMVSVLDILDDYLTYRGYPHERIDGSIK 884 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I +++ + + G G+NL + ++ F W+ + + Sbjct: 885 GNDRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTA-ADTVIIFDSDWNPQN-----DLQ 938 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY L+ +NT + L+ + K + +L + Sbjct: 939 AQARCHRIGQDKMVKVYRLVTKNTYERLMFDKASKKLGLDRAVLTKMN 986 >gi|302853754|ref|XP_002958390.1| hypothetical protein VOLCADRAFT_99672 [Volvox carteri f. nagariensis] gi|300256270|gb|EFJ40540.1| hypothetical protein VOLCADRAFT_99672 [Volvox carteri f. nagariensis] Length = 854 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 69/240 (28%), Gaps = 53/240 (22%) Query: 3 QYHK-FQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEE--------------- 45 Y + + L G N+ + ++AN + Sbjct: 439 LYSAVLRSKAVASLLYGGGGGEDNTLAVITALRKVANHPDLLLDPSGDAGEATAEGANTG 498 Query: 46 ------------KHWKEVHDEKIKALEVIIE--------KANAAPIIVAYHFNSDLARLQ 85 K + + ++ + ++ DL Sbjct: 499 RTCSSSCLPSFSKQFTATGSHQAAGKMQVLSLLLSAIAARGERCVVVSTSTATLDLVGQL 558 Query: 86 KAFPQGRTLDK---------DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFF 135 QG T + + +N+ G + + G GLNL +++ + Sbjct: 559 VCKAQGLTTVRIDGGTSVEGRQTVVDNFNKLGMGQVFLLSTRAGGAGLNLVGACHLV-LY 617 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ QQ + RI + G + FVY L+ TI+E V QR K+ + + Sbjct: 618 DSDWNPAMDQQAMARIW-----RDGQTKPCFVYRLLTTGTIEEKVYQRQLMKADLASATV 672 >gi|302794564|ref|XP_002979046.1| hypothetical protein SELMODRAFT_444050 [Selaginella moellendorffii] gi|300153364|gb|EFJ20003.1| hypothetical protein SELMODRAFT_444050 [Selaginella moellendorffii] Length = 1426 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 66/170 (38%), Gaps = 19/170 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------ 90 + + K++AL+++ + A ++V L L+ Sbjct: 1119 PPLQTIDFARTLMDSGKLQALDILFRRLRAEEHRVLVFAQMTKMLNILEDYMKYRKYKYL 1178 Query: 91 -----GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +D+ + I + + G G+NL + ++F+ W+ Sbjct: 1179 RLDGSSTIMDRRDMVKDFQHRSDIFVFLLSTRAGGLGINLTA-ADTVIFYESDWNPT--- 1234 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ + R + G + V VY LI + T++E +++R K+T+Q L++ Sbjct: 1235 --MDLQAMDRAHRLGQTKEVTVYRLICKGTVEEKIVKRANQKNTVQQLVM 1282 >gi|221481667|gb|EEE20043.1| DNA excision repair protein ERCC6, putative [Toxoplasma gondii GT1] Length = 1553 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 61/223 (27%), Gaps = 45/223 (20%) Query: 18 ENIEAFNSASKTVKCLQLANGAVY------YDEEKHWKEVHDEKIKALEVII--EKANAA 69 E + ++AN E + K+ L ++ KA Sbjct: 979 EKRDRCRMLFTLSVLRKIANHPDLLLVHNEVRPEDYGNPERSGKLIVLREVLRVWKAEGR 1038 Query: 70 PIIVAYHFNSDLARLQKAFPQ------------------------------GRTLDKDPC 99 +++ L LQ+ G + Sbjct: 1039 RVLLFAQTVQMLDILQRFLETCDPSVPSSSSSAPSSTIGGKKGFSFLRLDGGVPVASRHA 1098 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + I L G GLNL + +V F W+ R + Sbjct: 1099 IVDSFQRDSSIFALLLTTRVGGVGLNLTA-ADRVVIFDPDWNPMTDM-----QARERSWR 1152 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V +Y L+ +++E V R K + +L ++ Sbjct: 1153 IGQSKDVCIYRLLTSGSVEEKVYHRQVFKFFLSQKVLQDPRQR 1195 >gi|237832233|ref|XP_002365414.1| DNA excision repair protein, putative [Toxoplasma gondii ME49] gi|211963078|gb|EEA98273.1| DNA excision repair protein, putative [Toxoplasma gondii ME49] Length = 1555 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 61/223 (27%), Gaps = 45/223 (20%) Query: 18 ENIEAFNSASKTVKCLQLANGAVY------YDEEKHWKEVHDEKIKALEVII--EKANAA 69 E + ++AN E + K+ L ++ KA Sbjct: 991 EKRDRCRMLFTLSVLRKIANHPDLLLVHNEVRPEDYGNPERSGKLIVLREVLRVWKAEGR 1050 Query: 70 PIIVAYHFNSDLARLQKAFPQ------------------------------GRTLDKDPC 99 +++ L LQ+ G + Sbjct: 1051 RVLLFAQTVQMLDILQRFLETCDPSVPSSSSSAPSSTLGGKKGFSFLRLDGGVPVASRHA 1110 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + I L G GLNL + +V F W+ R + Sbjct: 1111 IVDSFQRDSSIFALLLTTRVGGVGLNLTA-ADRVVIFDPDWNPMTDM-----QARERSWR 1164 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V +Y L+ +++E V R K + +L ++ Sbjct: 1165 IGQSKDVCIYRLLTSGSVEEKVYHRQVFKFFLSQKVLQDPRQR 1207 >gi|298715287|emb|CBJ27936.1| Chromodomain-helicase-DNA-binding protein 8 [Ectocarpus siliculosus] Length = 3661 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 29/250 (11%), Positives = 73/250 (29%), Gaps = 60/250 (24%) Query: 2 KQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------- 51 K Y + L +A + + ++ + N + + Sbjct: 2234 KYYRAIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRGVEDHEVDQIVGNLM 2293 Query: 52 -------------------------------HDEKIKALEVIIEK--ANAAPIIVAYHFN 78 K+ L+ ++ K + +++ F Sbjct: 2294 AEAQAGDPNKASERLNQRVLKQLRLEKGLIHTSGKMVLLDKLLPKLRSEGHKVLIFSQFI 2353 Query: 79 SDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 L +Q+ T ++ +I +N + + + G G+NL Sbjct: 2354 GMLDMVQEFLSLRGHKHERLDGRTTGNERQKSIDRFNRDPNSFVFLLSTRAGGVGINLTA 2413 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + + W+ + + + R + G ++V VY LI ++ + + R K Sbjct: 2414 -ADTCIIYDSDWNPQN-----DVQAMARCHRIGQTKSVMVYRLITRDCFESEMFNRASMK 2467 Query: 188 STIQDLLLNA 197 ++ +L Sbjct: 2468 LGLEQAVLGD 2477 >gi|119499894|ref|XP_001266704.1| chromatin remodeling complex subunit (Chd3), putative [Neosartorya fischeri NRRL 181] gi|119414869|gb|EAW24807.1| chromatin remodeling complex subunit (Chd3), putative [Neosartorya fischeri NRRL 181] Length = 1509 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 69/198 (34%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDE-----------EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAY 75 ++ + Y E K+K LE+++ K +++ Sbjct: 952 LMQLRKCLCHPFVYSEAIEERTANAAASHKHLVEASGKLKLLEIMLPKLKQRGHRVLIFS 1011 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F +L ++ L + I E+N P S G G+ Sbjct: 1012 QFLDNLDIVEDFLDGLGLLHRRLDGRMTSLEKQKRIDEYNADNSPYFAFLLSTRSGGVGI 1071 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + ++R + G K V V+ L+ + +++E ++Q Sbjct: 1072 NL-ATADTVIIMDPDFNPHQDM-----QALSRAHRIGQKNKVLVFQLMTRGSVEEKIMQI 1125 Query: 184 LRTKSTIQDLLLNALKKE 201 + K + +L++ + E Sbjct: 1126 GKKKMVLDHVLIDRMVAE 1143 >gi|312066349|ref|XP_003136228.1| SNF2 family domain-containing protein [Loa loa] gi|307768614|gb|EFO27848.1| SNF2 family domain-containing protein [Loa loa] Length = 1965 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 ++ ++ G + + D + +I A + + F S Sbjct: 1330 LRLIEYDCGKLQVL----NSLLRDLFLYKHRCLIFTQMARVLDILQAFLSFHGYQYFRLD 1385 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +++ + +N + KI S G G+NL G + ++F+ W+ + Sbjct: 1386 GTTGIEQRQAMTERFNADPKIFCFILSTRSGGIGVNLT-GADTVIFYDSDWNPT-----M 1439 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G R V +Y L+++ TI+E +L++ K + ++ ++ Sbjct: 1440 DAQAQDRCHRIGQTRNVTIYRLVSERTIEENILRKAMQKRRLGEMAIDE 1488 >gi|261157174|gb|ACX54781.1| DEAD/DEAH box helicase domain-containing protein PIE1 [Oryza sativa Japonica Group] Length = 2044 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 70/168 (41%), Gaps = 19/168 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------- 89 Y ++ + K++ L +++ K+ ++ L L++ Sbjct: 1067 YFPDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLD 1126 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ +Q +N K L S G G+NL G + ++F+ W+ + Sbjct: 1127 GSTQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINL-VGADTVIFYDSDWNPA-----M 1180 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ R + G R V +Y LI+++TI+E +L++ K + DL++ Sbjct: 1181 DQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ 1228 >gi|194873165|ref|XP_001973152.1| GG13509 [Drosophila erecta] gi|190654935|gb|EDV52178.1| GG13509 [Drosophila erecta] Length = 1634 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1022 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGH 1081 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1082 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLD 1141 Query: 91 -GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N + + + G GLNLQ + +V F W+ + Sbjct: 1142 GTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1196 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1197 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1245 >gi|326917893|ref|XP_003205229.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Meleagris gallopavo] Length = 918 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 81/255 (31%), Gaps = 58/255 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDE-------------- 44 ++ Y K LQG + + +L N + Sbjct: 563 LELYRKLLSSRVITSCLQGRLENSPH-LICIGALKKLCNHPCLLFKAVKEKSCDPKSDEH 621 Query: 45 ------------------EKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLA 82 + E K++ L ++ +++ +++ ++ L Sbjct: 622 VESSLYEGLTDVFPQDYTSDIFSETDSGKLQVLVKLLAAIRELSSSERVVLVSNYTQTLN 681 Query: 83 R-LQKAFPQGRTLDK---------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGN 130 + G + + + +N P + + G GLNL G + Sbjct: 682 ILQETCKRYGYSYTRLDGNTPVSQRQQIVDSFNCKFSPAFIFLLSSKAGGVGLNL-VGAS 740 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ + + W+ + + R + G K V +Y L+ +I+E + QR +K + Sbjct: 741 HLILYDIDWNPAT-----DIQAMARVWRDGQKHTVHIYRLLTTGSIEEKIYQRQISKQDL 795 Query: 191 QDLLLNALK-KETIH 204 +++ K E IH Sbjct: 796 SGAVVDLSKTSEHIH 810 >gi|269969347|sp|B6ZLK2|CHD1_CHICK RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1 gi|218117883|dbj|BAH03306.1| chromodomain-helicase-DNA-binding protein 1 [Gallus gallus] Length = 1719 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + Sbjct: 719 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQH 778 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 779 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 838 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 839 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 892 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 893 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 936 >gi|154334239|ref|XP_001563371.1| DNA excision repair protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134060387|emb|CAM37551.1| putative DNA excision repair protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1258 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 64/218 (29%), Gaps = 56/218 (25%) Query: 28 KTVKCLQLANG-------------------------------------AVYYDEEKHWKE 50 + Q+ N + Sbjct: 798 LMNQLRQICNHADIYAVQQGADEEDRMMLGRHGAATKSSSASATRSGQHRSFRSNNPVNL 857 Query: 51 VHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 + K+ AL +++ + +++ L ++ Q Sbjct: 858 LGSGKLNALLMMLKEWQLFGHRVLIFSQTRMMLDIIENMCEQHAYRYIRMDGETNGHHRQ 917 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + I + G G+NL G + +V F W+ + + R Sbjct: 918 ELMDRFNEDDSIFVALLTTRVGGIGVNL-IGADRVVIFDPDWNP-----ITDVQARERAW 971 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V VY LI +++E +L+R K + D +L Sbjct: 972 RIGQKREVCVYRLITSGSVEEAILRRQLAKMYVTDKVL 1009 >gi|115313218|gb|AAI24095.1| Hells protein [Danio rerio] Length = 769 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 65/191 (34%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVIIEKAN--AAPIIVAYH 76 + + N A + K L+ ++ + +++ Sbjct: 580 LMLLKRCCNHAYLIEYPLDPTTGDFKIDEQLVEASGKFLILDRMLPELKKRGHKVLIFSQ 639 Query: 77 FNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 S L L D+D + ++ ++ L + G G+NL Sbjct: 640 MTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLSTRAGGLGINL 699 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ F W+ + + R + G + V VY LI NTIDE +L+R Sbjct: 700 TS-ADTVIIFGSDWNPQA-----DLQAQDRCHRIGQTKPVVVYRLITANTIDEKILERAS 753 Query: 186 TKSTIQDLLLN 196 K ++ ++++ Sbjct: 754 AKRKLEKMVIH 764 >gi|298710085|emb|CBJ31801.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1032 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 7/124 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G + + TI +N KI + + G G+ L G + ++ W+ Sbjct: 20 LRVCRIDGGHSDLERQHTIARFNANNKISVCLVSTGAGGTGITLT-GADRVILSDPSWNP 78 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + Q ++R + G KR V VY +IA T++E + ++ K ++ ++ K Sbjct: 79 ADDMQAVDR-----AYRIGQKRDVIVYRMIAAGTVEEKMYEKQIFKDGLRRTVMGGTVKR 133 Query: 202 TIHV 205 +V Sbjct: 134 KKNV 137 >gi|206558287|sp|A6ZU34|INO80_YEAS7 RecName: Full=Putative DNA helicase INO80; AltName: Full=Inositol-requiring protein 80 gi|151943662|gb|EDN61972.1| inositol requiring protein [Saccharomyces cerevisiae YJM789] Length = 1495 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K++ L+ ++ K + +++ + + +++ + + Sbjct: 1304 SAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 1363 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1364 VHDWQTNPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1417 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V VY L+ + TI+E + R + K +Q +++ +E Sbjct: 1418 GQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQE 1459 >gi|134077223|emb|CAK45564.1| unnamed protein product [Aspergillus niger] Length = 841 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 28/210 (13%) Query: 16 QGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVH------DEKIKALEVIIEK-- 65 + I + ++ N Y+ + K+ L+ ++ Sbjct: 553 GKKEIAQKKMQNPIMQARLACNSPHNFYWPWMDDPTSIDETLVTASGKMLLLDRLVPCLL 612 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRT------------LDKDPCTIQEWNEGKIPLLF 113 I++ F + L LQ Q R+ D+ + L Sbjct: 613 NKGHKILIFSQFKTQLDILQDWATQLRSWNCCRIDGAVSQEDRRAQIKAFNTDKNYKLFL 672 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL + ++ F W+ ++ + R + G + V VY L + Sbjct: 673 LSTRAGGQGINLMA-ADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTKPVIVYRLATK 726 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETI 203 T+++ +L++ +K ++ L++ K ++ Sbjct: 727 GTVEQTLLEKADSKRRLERLVIQKGKFRSL 756 >gi|322698671|gb|EFY90439.1| SNF2 family helicase/ATPase, putative [Metarhizium acridum CQMa 102] Length = 1104 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 19/173 (10%) Query: 46 KHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKA----------FPQGRTL 94 K + + KI+ + I+ +A IV F S L ++ + Sbjct: 883 KQTQVLASAKIREVTKILHAEAKEHKFIVFSQFTSMLDLVEPFLDKDGFEYARYDGSMKN 942 Query: 95 DKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D +++ + +L GLNL ++ +W+ +E + Sbjct: 943 DDREESLRRLREDQSTRVLLCSLKCGSLGLNLTA-ATRVIIVEPFWNP-----FVEEQAI 996 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-KKETIHV 205 R + V VY L +T++E ++ K + + + KKE + + Sbjct: 997 DRVHRLTQTVDVVVYKLTVADTVEERIIDLQNKKRELAEQTIEGGAKKEAMKL 1049 Score = 40.1 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 5/44 (11%), Positives = 14/44 (31%), Gaps = 3/44 (6%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 K Y + + + + + N+ + ++ Q N Sbjct: 567 KFYDRLEARADKSMEVMMQNKLSYANAFTLLLRLRQACNHPKLV 610 >gi|19347965|gb|AAL86315.1| putative helicase [Arabidopsis thaliana] Length = 744 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 71/198 (35%), Gaps = 21/198 (10%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANA 68 L ++ E + T + + K++ L++++++ A Sbjct: 402 LIQEIDSELPVVQPALQLTHRIFGSC--PPMQSFDPAKLLTDSGKLQTLDILLKRLRAGN 459 Query: 69 APIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +++ L L+ +D+ + I + Sbjct: 460 HRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTR 519 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + ++F+ W+ + + R + G + V VY LI + T++ Sbjct: 520 AGGLGINLTA-ADTVIFYESDWNPTL-----DLQAMDRAHRLGQTKDVTVYRLICKETVE 573 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L R K+T+Q L++ Sbjct: 574 EKILHRASQKNTVQQLVM 591 >gi|115910510|ref|XP_795650.2| PREDICTED: similar to SD02886p [Strongylocentrotus purpuratus] gi|115960830|ref|XP_001193156.1| PREDICTED: similar to SD02886p [Strongylocentrotus purpuratus] Length = 1571 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 67/174 (38%), Gaps = 25/174 (14%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------- 90 +K + K+ L+ ++ + +++ + L++ Sbjct: 1164 PDKDYLVTDSGKMHVLDDLLSQLKDQGHRVLIYSQMTRMIDILEEFLWHRKHTYMRLDGS 1223 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + D+ + I + + G G+NL + ++F+ W+ +++ Sbjct: 1224 SKISDRRDMVAGFQSRTDIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQ 1277 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + R + G + V VY LI + TI+E +L+R R KS + +KK+ I Sbjct: 1278 QAMDRAHRLGQTKQVTVYRLICKGTIEEHILERAREKSEV------RIKKKLIQ 1325 >gi|149035611|gb|EDL90292.1| rCG50332, isoform CRA_c [Rattus norvegicus] Length = 568 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 83/233 (35%), Gaps = 43/233 (18%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y +F R+ + + E + +S S +L N ++ +E Sbjct: 242 ELYKRFLRQAKPEEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDGFEGTLGIF 301 Query: 53 -------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ------ 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 302 PPGYNSKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYV 361 Query: 91 ----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 362 RLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN- 419 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 420 ----DEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 468 >gi|149049419|gb|EDM01873.1| chromodomain helicase DNA binding protein 4, isoform CRA_c [Rattus norvegicus] Length = 977 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 36 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 95 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 96 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 155 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 156 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 209 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 210 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 251 >gi|297683310|ref|XP_002819326.1| PREDICTED: DNA repair and recombination protein RAD54B-like isoform 1 [Pongo abelii] gi|297683312|ref|XP_002819327.1| PREDICTED: DNA repair and recombination protein RAD54B-like isoform 2 [Pongo abelii] Length = 910 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 75/249 (30%), Gaps = 57/249 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 ++ Y K LQG + + +L N KE K Sbjct: 556 IELYRKLLNSQVVRFCLQGLLENSPH-LICIGALKKLCNHPCLLFNSIKEKECSSTYDKN 614 Query: 59 LEVIIEK------------------------------------ANAAPIIVAYHFNSDLA 82 E + K +++ ++ L Sbjct: 615 EEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLN 674 Query: 83 RLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGN 130 LQ+ + + + + +N + + G GLNL GG+ Sbjct: 675 ILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNL-IGGS 733 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 734 HLILYDIDWNPAT-----DIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGL 788 Query: 191 QDLLLNALK 199 +++ K Sbjct: 789 CGAVVDLTK 797 >gi|125550862|gb|EAY96571.1| hypothetical protein OsI_18476 [Oryza sativa Indica Group] Length = 1157 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 77/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYD--EEKHWKEVHDEKI 56 + Q++ Y L +++E N+ + ++ + N + E D I Sbjct: 522 EMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 581 Query: 57 KALEVIIEKAN--------AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + ++ + +++ L L+ Sbjct: 582 ENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRD 641 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL ++++ + W+ + ++ R Sbjct: 642 ASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 695 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 696 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGR 738 >gi|73997430|ref|XP_867860.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 17 [Canis familiaris] Length = 1910 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/227 (11%), Positives = 61/227 (26%), Gaps = 39/227 (17%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 K Y + L + + + + N + K+ Sbjct: 977 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMVCCASSSPKMPNG 1036 Query: 60 E-------------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 + K +++ L L+ Sbjct: 1037 MYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDG 1096 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T + I +N + G G+NL + ++ + W+ Sbjct: 1097 GITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HN 1150 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1151 DIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1197 >gi|327283577|ref|XP_003226517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Anolis carolinensis] Length = 1918 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-HDEKIKAL 59 K Y + L + + + + N + + Sbjct: 979 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMFDGS 1038 Query: 60 EVI--------------IEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1039 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1098 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N P + G G+NL + ++ + W+ + Sbjct: 1099 MRQEAIDRFNAPGAPQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1152 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1153 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1194 >gi|41052809|dbj|BAD07677.1| putative photoperiod independent early flowering1 [Oryza sativa Japonica Group] Length = 2021 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 70/168 (41%), Gaps = 19/168 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP---------- 89 Y ++ + K++ L +++ K+ ++ L L++ Sbjct: 1044 YFPDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLD 1103 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ +Q +N K L S G G+NL G + ++F+ W+ + Sbjct: 1104 GSTQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINL-VGADTVIFYDSDWNPA-----M 1157 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ R + G R V +Y LI+++TI+E +L++ K + DL++ Sbjct: 1158 DQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQ 1205 >gi|66800671|ref|XP_629261.1| chromo domain-containing protein [Dictyostelium discoideum AX4] gi|60462656|gb|EAL60858.1| chromo domain-containing protein [Dictyostelium discoideum AX4] Length = 3071 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 70/231 (30%), Gaps = 39/231 (16%) Query: 4 YHKFQRELYCDLQGENIEAFN--SASKTV-KCLQLANGAVY----------------YDE 44 Y L + N S + + ++ N +E Sbjct: 1141 YRAILERNREFLSRGIKQKTNLPKLSNIMIQIRKVCNHPFLIPGAEESIVKQEKIAGDEE 1200 Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 K+ ++ +++ KA +++ L L+ + Sbjct: 1201 LGELLVKSSSKLVLVDKLLQRLKAEGHQVLIFSQMVESLNILEDYLQYREYTYERLDGSI 1260 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +I + + + + G G+NL + ++ F W+ + + Sbjct: 1261 KSEVRQASIDRFQDKGANRFVFLLSTRAGGVGINLTT-ADTVILFDSDWNPQS-----DL 1314 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G V VY LI +NT +E + + K + ++L+ K + Sbjct: 1315 QAQARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKLLLDHIVLSTNKDK 1365 >gi|42742173|ref|NP_116696.2| Irc5p [Saccharomyces cerevisiae S288c] gi|84028283|sp|P43610|IRC5_YEAST RecName: Full=Uncharacterized ATP-dependent helicase IRC5; AltName: Full=Increased recombination centers protein 5 gi|285811936|tpg|DAA12481.1| TPA: Irc5p [Saccharomyces cerevisiae S288c] Length = 853 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 82/220 (37%), Gaps = 36/220 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------VHD 53 K Y ++ L ++ + ++ + ++ Q+ + + E Sbjct: 551 KLY---KKNLQMEISNKKLQ-----NMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLKTS 602 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTI 101 K++ L+ +I + +++ F + L ++ + + Sbjct: 603 GKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQL 662 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++N K + + G G+NL G + +V F W+ + ++ + R + Sbjct: 663 EKFNSSKDKHNIFLLSTRAAGLGINL-VGADTVVLFDSDWNPQ-----VDLQAMDRCHRI 716 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V VY L NTI+ ++L R K ++ +++ K Sbjct: 717 GQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGK 756 >gi|328855756|gb|EGG04881.1| hypothetical protein MELLADRAFT_116969 [Melampsora larici-populina 98AG31] Length = 2104 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 72/249 (28%), Gaps = 63/249 (25%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------------- 51 ++ G++ + + +L N + + Sbjct: 1789 EGLVKKSKNAANGQDPSSQHVFQALQYLKKLVNHPAMVIRPEVPQHQAIINKLGSKGYRD 1848 Query: 52 --HDEKIKALEVIIEKA----------------------------NAAPIIVAYHFNSDL 81 H K+ AL I+ +++ L Sbjct: 1849 ISHAPKLLALRQILRDCGIGLTTATTLIETVTEDGAGTTTSGGTIPQHRVLIFCQMREML 1908 Query: 82 ARLQKAFPQGRTLD-------------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 ++ + K +Q +N + I L G GLNL Sbjct: 1909 DIIEHDLFKNHMPTVTFMRMDGTTEASKRHDIVQTFNADPSIDCLLLTTHVGGLGLNLT- 1967 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + ++F W+ M + + R + G K+ V VY LI + T++E ++ R K Sbjct: 1968 GADTVIFVEHDWNP-----MKDLQAMDRAHRLGQKKVVNVYRLITRATLEEKIMGLQRFK 2022 Query: 188 STIQDLLLN 196 I ++N Sbjct: 2023 LNIATSIVN 2031 >gi|255551667|ref|XP_002516879.1| helicase, putative [Ricinus communis] gi|223543967|gb|EEF45493.1| helicase, putative [Ricinus communis] Length = 1064 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 77/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYD--EEKHWKEVHDEKI 56 + Q++ Y L +++E N+ + ++ + N + E D I Sbjct: 427 QMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 486 Query: 57 KALEVIIEKAN--------AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 ++ + +++ L L+ L Sbjct: 487 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRD 546 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL ++++ + W+ + ++ R Sbjct: 547 ASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 600 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 601 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGR 643 >gi|294674417|ref|YP_003575033.1| SNF2 helicase family protein [Prevotella ruminicola 23] gi|294472802|gb|ADE82191.1| SNF2 helicase family protein [Prevotella ruminicola 23] Length = 713 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 63/200 (31%), Gaps = 30/200 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + + +S + ++ Q Y + + Sbjct: 514 YKQVHATILQAFASGISGRISSLALEGLLRLRQACIAPKYQTVIDYIETFRS-------- 565 Query: 62 IIEKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 +++ F S L + G T ++D Q ++ I + Sbjct: 566 -----EGRKVLLFSQFVSALHELEARLSSADIHFVTLYGDTRNRDIPVRQFQSDSSITVF 620 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + ++ WW+ +E + R + G K V V L+ Sbjct: 621 LISLKAGGFGLNLTS-ADRVILLDDWWNPA-----VEDQAMARAHRIGQKNNVLVLRLVC 674 Query: 173 QNTIDELVLQRLRTKSTIQD 192 ++T++E +LQ K D Sbjct: 675 KDTVEEKILQLQAQKRQTVD 694 >gi|240278065|gb|EER41572.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H143] Length = 1028 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 58/163 (35%), Gaps = 18/163 (11%) Query: 47 HWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTLD---------- 95 + + KI+ L I++ ++ IV F S L +++ Sbjct: 785 TPEHLASTKIRYLMKILKAESGDYKFIVFSFFTSMLNKIEPFLKDSHIGYVRYDGAMRND 844 Query: 96 -KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + N K +L + GLNL + +V +W+ +E + Sbjct: 845 LREISLDKLRNSPKTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEEQAID 898 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + V +Y L +NT++E ++ K + + + Sbjct: 899 RVHRLNQTVDVKIYKLTIKNTVEERIVDLQERKRELANATIEG 941 Score = 39.0 bits (89), Expect = 0.46, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 15/43 (34%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + + L + +NI ++ ++ Q N Sbjct: 525 YKRLEQRTDKTLERMIGDDNINYASALVLLLRLRQACNHPDLV 567 >gi|195477868|ref|XP_002086420.1| GE23128 [Drosophila yakuba] gi|194186210|gb|EDW99821.1| GE23128 [Drosophila yakuba] Length = 1634 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1022 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGH 1081 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1082 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLD 1141 Query: 91 -GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N + + + G GLNLQ + +V F W+ + Sbjct: 1142 GTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1196 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1197 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1245 >gi|170115166|ref|XP_001888778.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164636254|gb|EDR00551.1| SWR1 complex protein, SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1767 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 70/177 (39%), Gaps = 25/177 (14%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ 90 LQ+A + K++ L ++ +++ L L+ Sbjct: 1485 LQIA------FPHPSLLQYDCGKLQELANLLRDKKAGGHRVLIFTQMTKILDILEIFLNF 1538 Query: 91 G----------RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ++ + +N + ++ A S G G+NL G + +VF+ + Sbjct: 1539 HGYLYLRLDGATKIEDRQYITERFNADPRVFCFIASSRSGGVGINLT-GADTVVFYDSDF 1597 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + ++R R + G R V +Y ++Q+T++E +L++ K ++ D+++ Sbjct: 1598 NPQ-----MDRQCEDRAHRIGQIRDVHIYRFVSQHTVEEAMLRKANQKRSLDDIVIQ 1649 >gi|164424946|ref|XP_958315.2| hypothetical protein NCU09106 [Neurospora crassa OR74A] gi|157070726|gb|EAA29079.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 911 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K++AL +I + N +V F + L + + Sbjct: 716 CIRQFDLPDGSWMESAKVQALLKLIKQYQKNGDRALVFTRFAKVIEILGECLASEKIEYL 775 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I ++N + IP+ S G G+NL N ++ F + ++ Sbjct: 776 SLQGNTDVSERQELINDFNADATIPVFLLTTGSGGTGINLTA-ANKVIIFDQSDNPQD-- 832 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G R V + LI+++T++ELV + + K + + ++ Sbjct: 833 ---DIQAENRAHRLGQTRPVEIVRLISKDTVEELVYKACQKKLELANKVVG 880 >gi|114643073|ref|XP_001162478.1| PREDICTED: chromodomain helicase DNA binding protein 4 isoform 2 [Pan troglodytes] Length = 1893 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 965 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1024 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1025 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1084 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1085 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1138 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1139 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1180 >gi|109086956|ref|XP_001088870.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2 [Macaca mulatta] Length = 908 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 78/248 (31%), Gaps = 56/248 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-------- 50 ++ Y K LQG + + +L N KE Sbjct: 556 IELYRKLLNSQVVRFCLQGLLENSPH-LICIGALKKLCNHPCLLFNSIKEKECSTCDKNE 614 Query: 51 -----------------------VHDEKIKALEVIIEKANA----APIIVAYHFNSDLAR 83 K++ L ++ + +++ ++ L Sbjct: 615 EKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNI 674 Query: 84 LQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNI 131 LQ+ + + + + +N + + G GLNL GG+ Sbjct: 675 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNL-IGGSH 733 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 734 LILYDIDWNPAT-----DIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLC 788 Query: 192 DLLLNALK 199 +++ K Sbjct: 789 GAVVDLTK 796 >gi|170094100|ref|XP_001878271.1| SNF2 superfamily chromatin remodeling protein [Laccaria bicolor S238N-H82] gi|164646725|gb|EDR10970.1| SNF2 superfamily chromatin remodeling protein [Laccaria bicolor S238N-H82] Length = 1936 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 68/262 (25%), Gaps = 75/262 (28%) Query: 3 QYHKFQRELYCDLQGENIEAF----------NSASKTVKCLQLANGAVYYDEEKHWK--- 49 Y F + + I+A + +L N + Sbjct: 1608 LYDDFSKSKARTSAEDTIQASLSTKPEGGQQHVFQSLQYLRKLCNHPALVLKSNKEVISA 1667 Query: 50 ------------------------------------------EVHDEKIKALEVIIEKAN 67 E I +E + Sbjct: 1668 ALENANVQGDGLNDIRNAPKLLALKQLLLDCGIGGSAIASADSQKSELIDTVEEPGSSFS 1727 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD-------------KDPCTIQEWN-EGKIPLLF 113 +++ L ++ + K +Q +N + I L Sbjct: 1728 QHRVLIFCQMKQMLDIIESDLFKVHMPSVTYMRLDGATDAGKRHAIVQTFNSDPSIDCLL 1787 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G GL L G + ++F W+ M + + R + G K+ V VY LI + Sbjct: 1788 LTTHVGGLGLTLT-GADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITK 1841 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 T++E ++ R K I ++ Sbjct: 1842 GTLEEKIMGLQRFKLNIAHSVV 1863 >gi|157866587|ref|XP_001687685.1| DNA excision repair protein; SNF2 family helicase-like protein [Leishmania major strain Friedlin] gi|68125299|emb|CAJ03082.1| putative DNA excision repair protein [Leishmania major strain Friedlin] Length = 1252 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 65/218 (29%), Gaps = 56/218 (25%) Query: 28 KTVKCLQLANG-------------------------------------AVYYDEEKHWKE 50 + Q+ N + Sbjct: 786 LMNQLRQICNHADIYAVQQGADEEDRMMLARRGAAAKLSAISATRPGQHRSFRSNNPVDL 845 Query: 51 VHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + K+ AL +++ ++ ++V L ++ Q Sbjct: 846 LGSGKLNALLMMLKEWQSFGHRVLVFSQTRIMLDIIENMCEQQAYSYIRMDGATNSHYRQ 905 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + I + G G+NL G + +V + W+ + + R Sbjct: 906 ELMDRFNEDDSIFVALLTTRVGGIGVNL-IGADRVVIYDPDWNP-----ITDVQARERAW 959 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V VY LI +++E +L+R K + D +L Sbjct: 960 RIGQKREVCVYRLITSGSVEESILRRQLAKMYVTDKVL 997 >gi|150866039|ref|XP_001385507.2| transcriptional regulator [Scheffersomyces stipitis CBS 6054] gi|149387295|gb|ABN67478.2| transcriptional regulator [Scheffersomyces stipitis CBS 6054] Length = 1414 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 78/226 (34%), Gaps = 37/226 (16%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y L G + + + + +N +D ++ Sbjct: 593 EYYKNIITKNYSALNAGNKGAQISLLNVMSELKKASNHPYLFDGAENRVLAKVGSATRDN 652 Query: 51 ------VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GR 92 + K+ LE ++ K +++ L L G Sbjct: 653 ILRGMIMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRILDILGDYLSIKGYQFQRLDGGI 712 Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + +I +N + + + G G+NL + ++ F W+ + + Sbjct: 713 PSAQRRISIDHFNAPESKDFIFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DL 766 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 767 QAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMILEYAIIS 812 >gi|157818785|ref|NP_001100935.1| chromodomain helicase DNA binding protein 1 [Rattus norvegicus] gi|149047090|gb|EDL99810.1| chromodomain helicase DNA binding protein 1 (predicted) [Rattus norvegicus] Length = 1711 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 721 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 780 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 781 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 840 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 841 RRQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 894 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 895 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 938 >gi|47086607|ref|NP_997881.1| probable global transcription activator SNF2L2 isoform 1 [Danio rerio] gi|38173711|gb|AAH60676.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Danio rerio] Length = 1568 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 979 LYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFP 1038 Query: 53 ------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K +++ S + L+ F Sbjct: 1039 NGIISGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRL 1098 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1099 DGTTKSEDRAMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1154 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1155 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1203 >gi|195478527|ref|XP_002086509.1| GE22814 [Drosophila yakuba] gi|194186299|gb|EDW99910.1| GE22814 [Drosophila yakuba] Length = 611 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 259 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGH 318 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 319 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLD 378 Query: 91 -GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N + + + G GLNLQ + +V F W+ + Sbjct: 379 GTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 433 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 434 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 482 >gi|113673906|ref|NP_001038240.1| probable global transcription activator SNF2L2 isoform 2 [Danio rerio] gi|94732532|emb|CAK04077.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Danio rerio] Length = 1568 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 979 LYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFP 1038 Query: 53 ------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K +++ S + L+ F Sbjct: 1039 NGIISGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRL 1098 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 1099 DGTTKSEDRAMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 1154 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1155 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1203 >gi|307109767|gb|EFN58004.1| hypothetical protein CHLNCDRAFT_34395 [Chlorella variabilis] Length = 1019 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 81/226 (35%), Gaps = 38/226 (16%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + QR+ Y L ++++A + ++ + N + Sbjct: 356 EMQRKYYAALLQKDMDAVTGGADRSRLLNIVMQLRKCCNHPYLFQGAEPGPPYLTGDHLV 415 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + K+ L+ ++ K + +++ + L+ + + Sbjct: 416 ENAGKMVLLDKLLPKLQSRGSRVLIFSQMTRMIDILEDYCLYRQYGYCRIDGNTSGEDRE 475 Query: 99 CTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N G + + G G+NL Y +I++ + W+ + ++ + R Sbjct: 476 SQIDDYNKASGGRFVFLLSTRAGGLGINL-YTADIVILYDSDWNPQ-----MDLQAMDRA 529 Query: 157 RQAGFKRAVFVYYLIAQNTIDEL---VLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ ++I+E V+++ K + L++ + Sbjct: 530 HRIGQKKEVQVFRFCTDHSIEEKATCVIEKAYKKLRLDALVIQQGR 575 >gi|190406613|gb|EDV09880.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] Length = 853 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 82/220 (37%), Gaps = 36/220 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------VHD 53 K Y ++ L ++ + ++ + ++ Q+ + + E Sbjct: 551 KLY---KKNLQMEISNKKLQ-----NMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLKTS 602 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTI 101 K++ L+ +I + +++ F + L ++ + + Sbjct: 603 GKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQL 662 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++N K + + G G+NL G + +V F W+ + ++ + R + Sbjct: 663 EKFNSSKDKHNIFLLSTRAAGLGINL-VGADTVVLFDSDWNPQ-----VDLQAMDRCHRI 716 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V VY L NTI+ ++L R K ++ +++ K Sbjct: 717 GQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGK 756 >gi|6321289|ref|NP_011365.1| Ino80p [Saccharomyces cerevisiae S288c] gi|1723929|sp|P53115|INO80_YEAST RecName: Full=Putative DNA helicase INO80; AltName: Full=Inositol-requiring protein 80 gi|1322734|emb|CAA96861.1| unnamed protein product [Saccharomyces cerevisiae] gi|190407095|gb|EDV10362.1| hypothetical protein SCRG_01143 [Saccharomyces cerevisiae RM11-1a] gi|256272250|gb|EEU07241.1| Ino80p [Saccharomyces cerevisiae JAY291] gi|285812061|tpg|DAA07961.1| TPA: Ino80p [Saccharomyces cerevisiae S288c] Length = 1489 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K++ L+ ++ K + +++ + + +++ + + Sbjct: 1298 SAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 1357 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1358 VHDWQTNPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1411 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V VY L+ + TI+E + R + K +Q +++ +E Sbjct: 1412 GQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQE 1453 >gi|302852393|ref|XP_002957717.1| hypothetical protein VOLCADRAFT_107785 [Volvox carteri f. nagariensis] gi|300257011|gb|EFJ41266.1| hypothetical protein VOLCADRAFT_107785 [Volvox carteri f. nagariensis] Length = 610 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 71/204 (34%), Gaps = 23/204 (11%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-------ANA 68 + E A ++ + LQL + K+ K++ + V+ + Sbjct: 226 DASDAEVAVGAERSAQLLQLCGRFMLRRTCGLMKKYLPPKVEQVAVLEMMLKAVREGGSG 285 Query: 69 APIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLLFAHPAS 118 +++ ++ L L+ ++ + +N+ P +S Sbjct: 286 DKVVLVSNYTEALDVLEVMCRTHGWVSLRLDGSCSVKSRQPIVDTFNDPSHPSFLLLLSS 345 Query: 119 CGHGLNLQYG-GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G+ L N LV F W+ + + R + G K+ V++Y L+ TI+ Sbjct: 346 KAGGVGLNIIGANRLVLFDPDWNPAN-----DLQAMARVWRQGQKKKVWIYRLLTTGTIE 400 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E V QR K + +++ + Sbjct: 401 EKVYQRQLAKQGLSAAVVDDTAAQ 424 >gi|302510062|ref|XP_003016991.1| hypothetical protein ARB_05285 [Arthroderma benhamiae CBS 112371] gi|291180561|gb|EFE36346.1| hypothetical protein ARB_05285 [Arthroderma benhamiae CBS 112371] Length = 1055 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 56/172 (32%), Gaps = 18/172 (10%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQGRTLD- 95 G KI+ L ++++ + IV F S L +++ G Sbjct: 800 GLSQPMPNVIHDVQTSAKIRHLMRVLKRESGQFKFIVFSVFTSMLDKIEPFLKNGGIGYA 859 Query: 96 ----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++ + N +L + GLNL + +V +W+ Sbjct: 860 RYDGGMRNDLREASLNRLRNSSGTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP---- 914 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E + R + V VY L + T++E +L+ K + + Sbjct: 915 -FVEEQAIDRVHRLNQTVDVKVYKLTIKGTVEERILELQERKRELAKSTIEG 965 Score = 39.0 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + R L + G+NI + ++ Q N Sbjct: 563 YQRLEQRADRSLERMIGGQNISYAGALVLLLRLRQACNHPDLV 605 >gi|154279322|ref|XP_001540474.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150412417|gb|EDN07804.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 1148 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 61/162 (37%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + +H K+ L ++ K N ++ F L + Sbjct: 933 KNDEWMHSGKVDKLCDLLRRFKENGDRTLIFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 992 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ T+ ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 993 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDVQA 1046 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1047 ENRAHRVGQTRPVEVVRLVTRDTIEEQIYALGQTKLALDQRV 1088 >gi|300794189|ref|NP_001179884.1| RAD54 homolog B [Bos taurus] gi|297482525|ref|XP_002692864.1| PREDICTED: RAD54 homolog B (S. cerevisiae) [Bos taurus] gi|296480441|gb|DAA22556.1| RAD54 homolog B [Bos taurus] Length = 909 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 16/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 + + EE+ K K+ A+ + A ++ Y D+ + Sbjct: 633 PIMFTEEESGKLQVLSKLLAVIRELRPAEKVVLVSNYTRTLDILQEVCKRHGYAYTRLDG 692 Query: 92 -RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + + +N + + G GLNL GG+ L+ + + W+ Sbjct: 693 QTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNL-IGGSHLILYDIDWNPAT----- 746 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++R + G K V +Y L+ TI+E + QR +K + +++ K Sbjct: 747 DIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLSK 797 >gi|308813301|ref|XP_003083957.1| Swi2/Snf2-related protein DDM1; decrease in DNA methylation 1; CHR1 (ISS) [Ostreococcus tauri] gi|116055839|emb|CAL57924.1| Swi2/Snf2-related protein DDM1; decrease in DNA methylation 1; CHR1 (ISS) [Ostreococcus tauri] Length = 708 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 77/228 (33%), Gaps = 37/228 (16%) Query: 5 HKFQRELYCDL-----QGENIEAFNSAS--KTVKCLQLANGA---------VYYDEEKHW 48 + +L I ++A ++ + N Sbjct: 407 DALVNKTMQELLQQVAGSGRIPVGHTAVNNLLMQLRKNCNHPDLITGGLDGSIMFPSADE 466 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K++ L+ +++K A ++V L L+ F Q D Sbjct: 467 LVEQCGKMQLLDRLMKKLRARGHKVLVFSQMTRMLDLLESYFQQRGENVCRIDGSVKQDD 526 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N + + + G G+NL G+ ++ + W+ + + + R Sbjct: 527 RREFIAKFNTDPDYGIFLLSTRAGGLGINLTA-GDTVIIYDSDWNPHQ-----DLQAMDR 580 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL--NALKKE 201 + G + V VY L +++ +L++ +K ++ L++ K+E Sbjct: 581 VHRIGQTKPVHVYRLATAKSVEGKMLKKAASKLALEKLVVTGGGFKQE 628 >gi|26330021|dbj|BAC28749.1| unnamed protein product [Mus musculus] Length = 1045 Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 729 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 788 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 789 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 848 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 849 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 902 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 903 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 944 >gi|156399887|ref|XP_001638732.1| predicted protein [Nematostella vectensis] gi|156225855|gb|EDO46669.1| predicted protein [Nematostella vectensis] Length = 911 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 63/190 (33%), Gaps = 29/190 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEV----------HDEKIKALEVIIE--KANAAPIIVAYH 76 + + N + K+ L+ ++ K I++ Sbjct: 647 LMLLRKCCNHPYLLEYPLDPVTQQYKIDEELVRCSGKMLLLDQMVPALKRRGHKILIFSQ 706 Query: 77 FNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 L LQ + D+ ++ + + + G GLNL Sbjct: 707 MTKMLDILQDYCYLRGYQYSRLDGSMKVEDRREEIDAFASDPEKFIFLLSTRAGGLGLNL 766 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + + VY L+ NT+D+ +++R Sbjct: 767 -SAADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPILVYRLVTSNTVDQKIVERAA 820 Query: 186 TKSTIQDLLL 195 +K ++ +++ Sbjct: 821 SKRKLEKMVI 830 >gi|254304375|ref|ZP_04971733.1| Snf2 family helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324567|gb|EDK89817.1| Snf2 family helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 899 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 84/213 (39%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E + K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELETKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + +++ G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ +E + R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNLVS-ADTIFIYDPWWN-----TTVENQAIDRAYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLISEDN 882 >gi|303289625|ref|XP_003064100.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226454416|gb|EEH51722.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 743 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 71/210 (33%), Gaps = 30/210 (14%) Query: 10 ELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVH---------DEKIKA 58 E+ L G ++A + ++ + N + K + Sbjct: 431 EMLQKLSGGVAPVGSTALNNMLMQLRKNCNHPDLISGGLDGSIMFPSAAELVEQCGKFRL 490 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWN- 105 L+ I++K ++ L ++ F Q + + + +N Sbjct: 491 LDRIMKKLRQRGHKTLIFSQMTKMLDLIESYFEQQGSRVCRIDGSVAWQERKEQMDAFNT 550 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + + G G+NL + ++ + W+ + + R + G + V Sbjct: 551 DPSVDIFLLSTRAGGLGINLTA-ADTVIIYDSDWNPHQDM-----QAMDRCHRIGQTKPV 604 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V L ++++ +L R +K ++ L++ Sbjct: 605 HVLRLATAHSVEGKMLSRANSKLALEKLVI 634 >gi|225562463|gb|EEH10742.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 1181 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 61/162 (37%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + +H K+ L ++ K N ++ F L + Sbjct: 966 KNDEWMHSGKVDKLCELLRRFKENGDRTLIFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 1025 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ T+ ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 1026 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDVQA 1079 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1080 ENRAHRVGQTRPVEVVRLVTRDTIEEQIYALGQTKLALDQRV 1121 >gi|195117078|ref|XP_002003076.1| GI24344 [Drosophila mojavensis] gi|193913651|gb|EDW12518.1| GI24344 [Drosophila mojavensis] Length = 843 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 69/183 (37%), Gaps = 20/183 (10%) Query: 34 QLANGA-VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 QL N +Y + K + L+ ++ K A +++ F L +++ Sbjct: 630 QLCNKYELYDVKIPDNLICESGKFQYLDTLLPKLKAEGHRVLLFSQFTMMLDVVEQYLRI 689 Query: 91 GRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + I ++N + I + + G G+NL + + + + Sbjct: 690 RKHGFCRLDGATAVKERQDLITDFNVDDNIFVFLLSTKAGGVGINLTA-ADTCIIHDIDF 748 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++ R + G R V +Y LI++NTI+E +L K ++ + + K Sbjct: 749 NP-----YNDKQAEDRCHRMGQNRPVTIYRLISENTIEEGILMAAEEKLKLEKDITSTEK 803 Query: 200 KET 202 E Sbjct: 804 GEV 806 >gi|126340045|ref|XP_001369474.1| PREDICTED: similar to Mi-2 protein [Monodelphis domestica] Length = 1777 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 849 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 908 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 909 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 968 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 969 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1022 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1023 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1064 >gi|115385374|ref|XP_001209234.1| helicase swr1 [Aspergillus terreus NIH2624] gi|114196926|gb|EAU38626.1| helicase swr1 [Aspergillus terreus NIH2624] Length = 1532 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 68/179 (37%), Gaps = 11/179 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + K + D K +I + + F + Sbjct: 1199 RLSIAFPDKRLLQYDCGKLQRLD----KLLRDLKAGGHRALIFTQMTKMLDILEQFLNIH 1254 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N + +I S G G+NL G + ++F+ L W+ Sbjct: 1255 GHRYLRLDGTTKVEQRQILTDRFNNDDRILAFILSSRSGGLGINLT-GADTVIFYDLDWN 1313 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y +++ TI+ +L++ K + D+++ + Sbjct: 1314 PA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQEGE 1367 >gi|322799754|gb|EFZ20959.1| hypothetical protein SINV_16592 [Solenopsis invicta] Length = 529 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/225 (12%), Positives = 66/225 (29%), Gaps = 37/225 (16%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + + N + E Sbjct: 250 KYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTGPNGSYETS 309 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLD 95 K+ L +++K + +++ L + T Sbjct: 310 ALIKAAGKLVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGNITGA 369 Query: 96 KDPCTIQEWNEGKI-----PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I +N + + G G+NL + ++ + W+ + Sbjct: 370 QRQEAIDRFNAPGKYCAQQFVFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDI 423 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 424 QAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 468 >gi|67521594|ref|XP_658859.1| hypothetical protein AN1255.2 [Aspergillus nidulans FGSC A4] gi|40746692|gb|EAA65848.1| hypothetical protein AN1255.2 [Aspergillus nidulans FGSC A4] gi|259488424|tpe|CBF87846.1| TPA: chromodomain helicase (Chd1), putative (AFU_orthologue; AFUA_1G10290) [Aspergillus nidulans FGSC A4] Length = 1517 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y + Y L + + + ++ + +N + + Sbjct: 688 LEYYKNILTKNYAALNEGTKGQKQSLLNIMMELKKASNHPFMFPSAETKILEGSTRREDV 747 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ-KAFPQGRTLDK------ 96 K+ L+ ++ K + +++ L L +G T + Sbjct: 748 LRALITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMEYRGYTYQRLDGTIP 807 Query: 97 ---DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + ++ F W+ + + Sbjct: 808 SASRRLAIEHYNAPDSSDFAFILSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQ 861 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++T++E V++R R K + Sbjct: 862 AMARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLL 900 >gi|300122317|emb|CBK22889.2| unnamed protein product [Blastocystis hominis] Length = 698 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 73/220 (33%), Gaps = 28/220 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWKEVHD 53 + Y K Y + E + + ++ ++A + D + Sbjct: 247 ELYKKVLVNDYESIVNSRAERSHLLNLLMQLRKVAGHPYLFEGVEDRSLDPMGEHVITNC 306 Query: 54 EKI--KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K+ + K + +++ L L+ I Sbjct: 307 GKMVLLDKLLKRLKEKGSRVLLFSQMRRVLDILEDYCNIRGFEYCRIDGSTESVDREEEI 366 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G G+NL + ++ + W+ + ++ R + Sbjct: 367 NSFNAENSTKFVFLLSTRAGGLGINL-ATADTVILYDSDWNPQ-----MDLQAEDRAHRI 420 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V VY L+ + T++E++++R + K + L++ + Sbjct: 421 GQKKTVNVYRLVTEGTVEEMIVERAKLKLRLDTLVIQQGR 460 >gi|156550287|ref|XP_001603076.1| PREDICTED: similar to CG2684-PA [Nasonia vitripennis] Length = 1032 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 72/249 (28%), Gaps = 62/249 (24%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA- 66 + + +IEA ++ Q+ ++ + I + +E Sbjct: 775 KAQKVLLEHHSSIEAHEILVLLLRLRQMCCHPALIHAMLDQQDAENMSINQEDEEVEDYV 834 Query: 67 ------------------------------------------NAAPIIVAYHFNSDLAR- 83 IIV + S L Sbjct: 835 ADYKIDNRVAANLLTKKNPVFDDERRSSKVRAIVKTIEEILEKGDKIIVVSQWTSFLGIV 894 Query: 84 ----------LQKAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNI 131 F + + ++N+ +L + G GLNL G N Sbjct: 895 AKNLDDIEDAKYAMFTGNVAVKNRQAIVDKFNDPNEDTNILLLSLTAGGVGLNL-VGANH 953 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + W+ + Q +RI + G K+ V+VY I ++TI+E V K I Sbjct: 954 LLLIDIHWNPQLESQAQDRI-----YRFGQKKNVYVYKFICKDTIEERVKNLQDKKLEIA 1008 Query: 192 DLLLNALKK 200 + +L + Sbjct: 1009 NHVLTGSRA 1017 >gi|195033465|ref|XP_001988689.1| GH10438 [Drosophila grimshawi] gi|193904689|gb|EDW03556.1| GH10438 [Drosophila grimshawi] Length = 843 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 72/183 (39%), Gaps = 20/183 (10%) Query: 34 QLANGA-VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----- 85 QL N +Y + + K + ++ ++ K A+ +++ F L ++ Sbjct: 630 QLCNKYELYDVKIPNNLICDSGKFQFMDDLLPKLKADGHRVLLFSQFTMMLDVVEEYLKI 689 Query: 86 -----KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 G + + I ++N + I + + G G+NL + + + + Sbjct: 690 RKHGFCRLDGGTAVKERQDLITDFNVDDNIFVFLLSTKAGGVGINLTA-ADTCIIHDIDF 748 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++ R + G R V +Y LI+++TI+E +L K +++ + + K Sbjct: 749 NP-----YNDKQAEDRCHRMGQSRPVSIYRLISESTIEEGILMAAEEKLKLEENITSIEK 803 Query: 200 KET 202 E Sbjct: 804 GEV 806 >gi|126273212|ref|XP_001374884.1| PREDICTED: similar to helicase, lymphoid-specific, [Monodelphis domestica] Length = 824 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 64/191 (33%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + K L+ ++ + +++ Sbjct: 550 MMLLRKCCNHPYLIEYPLDPVTQEFQINEELVTSSGKFLILDRMLPELKNRGHKVLLFSQ 609 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + + ++N + ++ L + G G+NL Sbjct: 610 MTMMLDILMDYCYLRNYSFSRLDGSMSYVEREENMHKFNTDPEVFLFLVSTRAGGLGINL 669 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NT+D+ +++R Sbjct: 670 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTVDQKIVERAA 723 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 724 AKRRLEKLIIH 734 >gi|291221939|ref|XP_002730974.1| PREDICTED: helicase, lymphoid specific-like [Saccoglossus kowalevskii] Length = 905 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 61/193 (31%), Gaps = 28/193 (14%) Query: 29 TVKCLQLANGAVYYDEE---------KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHF 77 + + N K L+ ++ K +++ Sbjct: 630 MMLLRKCCNHPYLLSYPINERNEYIIDEQLVQKSGKCLILDRLLPALKERGHKVLLFSQM 689 Query: 78 NSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 L L +D+ N+ + + G GLNL Sbjct: 690 TKMLDILGDYCFLRKFKTCRLDGTMSYVDRQEQISTFNNDKDAFIFLLSTRAGGLGLNL- 748 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + ++ + W+ + + R + G + V V+ L+ QNTID+ +++R Sbjct: 749 ASADTVIIYDSDWNPQS-----DLQAQDRCHRIGQNKPVTVFRLVTQNTIDQKIVERASA 803 Query: 187 KSTIQDLLLNALK 199 K ++ ++++ K Sbjct: 804 KRKLEKMVIHQGK 816 >gi|290889294|gb|ADD69945.1| chromo-helicase DNA-binding protein [Zonotrichia albicollis] Length = 1808 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + Sbjct: 720 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQH 779 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 780 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 839 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 840 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 893 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 894 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 937 >gi|195327907|ref|XP_002030658.1| GM24456 [Drosophila sechellia] gi|194119601|gb|EDW41644.1| GM24456 [Drosophila sechellia] Length = 1638 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1026 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGH 1085 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1086 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLD 1145 Query: 91 -GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N + + + G GLNLQ + +V F W+ + Sbjct: 1146 GTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1200 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1201 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1249 >gi|157012|gb|AAA19661.1| brahma protein [Drosophila melanogaster] Length = 1638 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1026 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGH 1085 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1086 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLD 1145 Query: 91 -GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N + + + G GLNLQ + +V F W+ + Sbjct: 1146 GTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1200 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1201 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1249 >gi|24664907|ref|NP_730088.1| brahma, isoform D [Drosophila melanogaster] gi|28574896|ref|NP_536745.4| brahma, isoform C [Drosophila melanogaster] gi|23093400|gb|AAN11773.1| brahma, isoform C [Drosophila melanogaster] gi|23093401|gb|AAN11774.1| brahma, isoform D [Drosophila melanogaster] gi|33589348|gb|AAQ22441.1| RE61274p [Drosophila melanogaster] Length = 1634 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1022 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGH 1081 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1082 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLD 1141 Query: 91 -GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N + + + G GLNLQ + +V F W+ + Sbjct: 1142 GTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1196 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1197 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1245 >gi|17985967|ref|NP_536746.1| brahma, isoform A [Drosophila melanogaster] gi|24664914|ref|NP_730089.1| brahma, isoform B [Drosophila melanogaster] gi|19857556|sp|P25439|BRM_DROME RecName: Full=ATP-dependent helicase brm; AltName: Full=Homeotic gene regulator; AltName: Full=Protein brahma gi|7294205|gb|AAF49557.1| brahma, isoform B [Drosophila melanogaster] gi|20152033|gb|AAM11376.1| LD36356p [Drosophila melanogaster] gi|23093402|gb|AAF49558.3| brahma, isoform A [Drosophila melanogaster] Length = 1638 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1026 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGH 1085 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1086 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLD 1145 Query: 91 -GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N + + + G GLNLQ + +V F W+ + Sbjct: 1146 GTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1200 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1201 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1249 >gi|309366266|emb|CAP21787.2| CBR-SSL-1 protein [Caenorhabditis briggsae AF16] Length = 1964 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 7/122 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F S +++ ++ +N + K+ S G G+NL G + ++F+ Sbjct: 1312 FLSHHGYQYFRLDGTTGVEQRQAMMERFNADSKVFCFILSTRSGGVGVNLT-GADTVIFY 1370 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ ++ R + G R V +Y LI++ TI+E +L++ K + +L + Sbjct: 1371 DSDWNPT-----MDAQAQDRCHRIGQTRNVSIYRLISERTIEENILKKATQKRRLGELAI 1425 Query: 196 NA 197 + Sbjct: 1426 DE 1427 >gi|302691444|ref|XP_003035401.1| hypothetical protein SCHCODRAFT_81511 [Schizophyllum commune H4-8] gi|300109097|gb|EFJ00499.1| hypothetical protein SCHCODRAFT_81511 [Schizophyllum commune H4-8] Length = 842 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 92 RTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T K + E+N+ + + G G+NL G N L+ F W+ Q Sbjct: 650 MTTTKRQKMVDEFNDPNNTEKFVFLLSSKAGGCGINL-IGANRLILFDPDWNPAADQ--- 705 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K+ FVY I+ TI+E + QR K + +++ Sbjct: 706 --QALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQALSSSVVDE 752 >gi|297817054|ref|XP_002876410.1| hypothetical protein ARALYDRAFT_907192 [Arabidopsis lyrata subsp. lyrata] gi|297322248|gb|EFH52669.1| hypothetical protein ARALYDRAFT_907192 [Arabidopsis lyrata subsp. lyrata] Length = 1507 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 71/198 (35%), Gaps = 21/198 (10%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANA 68 L ++ E + T + + K++ L++++++ A Sbjct: 1165 LIQEIDSELPLVQPALQLTHRIFGSC--PPMQSFDPAKLLTDSGKLQTLDILLKRLRAGN 1222 Query: 69 APIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +++ L L+ +D+ + I + Sbjct: 1223 HRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTR 1282 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + ++F+ W+ + + R + G + V VY LI + T++ Sbjct: 1283 AGGLGINLTA-ADTVIFYESDWNPTL-----DLQAMDRAHRLGQTKDVTVYRLICKETVE 1336 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L R K+T+Q L++ Sbjct: 1337 EKILHRASQKNTVQQLVM 1354 >gi|218188229|gb|EEC70656.1| hypothetical protein OsI_01941 [Oryza sativa Indica Group] Length = 1259 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 78/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q++ Y L +++E N+ + ++ + N + Sbjct: 469 QMQKQYYRALLQKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV 528 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ Sbjct: 529 ENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRD 588 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL +++V + W+ + + R Sbjct: 589 ASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVVLYDSDWNPQA-----DLQAQDRA 642 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 643 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGR 685 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 47/125 (37%), Gaps = 8/125 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVF 134 + + +I+ +N+ + + G G+NL +++V Sbjct: 828 YLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVVL 886 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + + R + G K+ V V+ + TI+E V++R K + L+ Sbjct: 887 YDSDWNPQA-----DLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALV 941 Query: 195 LNALK 199 + + Sbjct: 942 IQQGR 946 >gi|145484966|ref|XP_001428492.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124395578|emb|CAK61094.1| unnamed protein product [Paramecium tetraurelia] Length = 1405 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 72/222 (32%), Gaps = 35/222 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD--------- 53 Y + + L + + + + + +L N + E Sbjct: 713 LYERNKSALIQGFSQQTAQIASLNNLDMHLRKLCNHPLLLKEMHSDILEKSKGNEGEYQK 772 Query: 54 ------EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------- 96 K+ L+ +++K +++ F + LA L++ + + Sbjct: 773 ILIEYSGKMVLLDKMLKKFLKEDKKMLIFSQFTNMLALLEEYLQFNQIKYEKITGDIKQI 832 Query: 97 -DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N+ K + + G G+NL I+V F W+ + + Sbjct: 833 DRQNAIDRFNDQKKGRQVFLLSTKAGGQGINLTA-AEIVVIFDSDWNPQN-----DIQAT 886 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + V VY I +NT + + +R K + + Sbjct: 887 ARAHRIGQDKQVTVYRFITKNTYEAKMFERAFAKLGLDQAIF 928 >gi|224089288|ref|XP_002186536.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 1650 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + Sbjct: 567 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQH 626 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 627 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 686 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 687 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 740 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 741 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 784 >gi|67478494|ref|XP_654639.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica HM-1:IMSS] gi|56471706|gb|EAL49253.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 1262 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 24/200 (12%), Positives = 68/200 (34%), Gaps = 25/200 (12%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-------AAPIIVA 74 + + ++ +L N + +E + + + ++I+ +++ Sbjct: 633 KTSLMNICMELKKLCNHPILINELMNSENEENLIQSCGKMILLDKLLVKLKETGHRVLIF 692 Query: 75 YHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN--EGKIPLLFAHPASCGHG 122 L L + + +N + + + G G Sbjct: 693 SQMVRMLDVLSNYLHFRGFNYQRLDGAMGREARQRAMDHFNAKDSTDFVFLLSTRAGGLG 752 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL + ++ + W+ + + R + G ++ V +Y L + TI+E +L Sbjct: 753 INLTT-ADTVIIYDSDWNPQN-----DLQAQARCHRIGQEKTVNIYRLATEGTIEEKILL 806 Query: 183 RLRTKSTIQDLLLNALKKET 202 + K + L++ ++K+ Sbjct: 807 SAKKKLVLDHLIIQTMEKKG 826 >gi|242051170|ref|XP_002463329.1| hypothetical protein SORBIDRAFT_02g041910 [Sorghum bicolor] gi|241926706|gb|EER99850.1| hypothetical protein SORBIDRAFT_02g041910 [Sorghum bicolor] Length = 1685 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 26/230 (11%), Positives = 69/230 (30%), Gaps = 35/230 (15%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + +L + + V+ + N ++ H + Sbjct: 799 QYYKWILERNFQNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSIGDRNKV 858 Query: 61 VIIEKANA----------------APIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 I ++ +++ L L + + Sbjct: 859 ERIVMSSGKLVLLDKLLVRLRETNHRVLIFSQMVKMLDILAEYLSLRGFQFQRLDGSTRA 918 Query: 98 ---PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +N + G G+NL + ++ F W+ + + Sbjct: 919 DLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQA 972 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++R + G + V +Y + +++E +L+R + K + L++ L E Sbjct: 973 MSRAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNAEG 1022 >gi|302504563|ref|XP_003014240.1| SWI/SNF family DNA-dependent ATPase, putative [Arthroderma benhamiae CBS 112371] gi|291177808|gb|EFE33600.1| SWI/SNF family DNA-dependent ATPase, putative [Arthroderma benhamiae CBS 112371] Length = 1171 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------P 98 K+ I++ + I+ F S L ++ + + Sbjct: 997 SAKVDKTIEILQSLRDSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGSMKPADRND 1056 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + ++ + GLNL + ++ +W+ IE + R + Sbjct: 1057 SVLDFTDNPDCRIMLVSLKAGNSGLNLVA-ASQVIILDPFWNP-----YIEDQAIDRAHR 1110 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V V+ L+ +NT+++ ++ K I + L+ Sbjct: 1111 IGQLRPVMVHRLLIENTVEDRIIALQDKKRQIIEGALDE 1149 >gi|73997412|ref|XP_867794.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 8 [Canis familiaris] Length = 1883 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 25/219 (11%), Positives = 61/219 (27%), Gaps = 31/219 (14%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 K Y + L + + + + N + E Sbjct: 961 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVEAPKMPNGMYDGSALI 1020 Query: 51 --VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + + K +++ L L+ G T + Sbjct: 1021 RASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQ 1080 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + G G+NL + ++ + W+ + +R Sbjct: 1081 EAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAFSRA 1134 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V +Y + + +++E + Q + K + L++ Sbjct: 1135 HRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1173 >gi|255947258|ref|XP_002564396.1| Pc22g03550 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591413|emb|CAP97643.1| Pc22g03550 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1454 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 87/234 (37%), Gaps = 40/234 (17%) Query: 2 KQYHKFQR---ELYCDLQGENIEAFNSASK------TVKCLQLANGAVYYDEEKHWKEVH 52 K Y + +L + + A A + ++ + Y+ + + + Sbjct: 884 KLYRSILKKNPQLIKAICKKQTGALKKAERHNLNNILIQLRKCLCHPYIYNRDIEEQTID 943 Query: 53 -----------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-- 97 K++ L +++ + A +++ F +L ++ + Sbjct: 944 PQLSHHRLVEASGKLRLLNLMLPQLRARGHRVLIFSQFLENLDIVEDFLAGLELKYRRLD 1003 Query: 98 --------PCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +I E+N P S G G+NL + ++ ++ ++ Sbjct: 1004 GRMSSREKQKSIDEFNAPDSPFFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPKQDM-- 1060 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++R + G K V V++L+ + +++E ++Q+ ++K + +L++ ++ + Sbjct: 1061 ---QALSRAHRIGQKNTVLVFHLVVRASVEEKIMQKGKSKMALDHVLIDRIEAD 1111 >gi|209876524|ref|XP_002139704.1| helicase SWR1 protein [Cryptosporidium muris RN66] gi|209555310|gb|EEA05355.1| helicase SWR1 protein, putative [Cryptosporidium muris RN66] Length = 1446 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 7/147 (4%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKI 109 +H+ K II + + + F + G +D + +N + ++ Sbjct: 1117 LHNLKKGDHRCIIFTQMSKMLDILEAFINFHGYTYLRLDGGTKVDARQKLVDRFNKDRRL 1176 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L + S G GLNL G + ++F+ W+ ++R + R + G R V +Y Sbjct: 1177 FLFISSTRSGGVGLNLT-GADTVIFYDSDWNPA-----MDRQAMDRCHRIGQTRDVHIYR 1230 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+++ TI+E + ++ K + D++++ Sbjct: 1231 LLSEWTIEENIFRKQLQKRLLDDVVVD 1257 >gi|149642515|ref|XP_001505934.1| PREDICTED: similar to helicase, lymphoid-specific [Ornithorhynchus anatinus] Length = 823 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 23/191 (12%), Positives = 64/191 (33%), Gaps = 29/191 (15%) Query: 29 TVKCLQLANGAVYY----------DEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 549 MMLLRKCCNHPYLIEYPLDPATQEFQVDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 608 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L + + ++N + ++ + + G G+NL Sbjct: 609 MTMMLDILMDYCYLRSFSFSRLDGSMSYAAREENMHKFNTDPEVFIFLVSTRAGGLGINL 668 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ + + R + G + V VY L+ NT+D+ +++R Sbjct: 669 TA-ADTVIIYDSDWNPQS-----DLQAQDRCHRIGQTKPVVVYRLVTANTVDQKIVERAA 722 Query: 186 TKSTIQDLLLN 196 K ++ L+++ Sbjct: 723 AKRKLEKLIIH 733 >gi|150865383|ref|XP_001384576.2| transcriptional accessory protein involved in TBP (TATA-binding protein) regulation helicase MOT1 [Scheffersomyces stipitis CBS 6054] gi|149386639|gb|ABN66547.2| transcriptional accessory protein involved in TBP (TATA-binding protein) regulation helicase MOT1 [Scheffersomyces stipitis CBS 6054] Length = 1901 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 80/259 (30%), Gaps = 70/259 (27%) Query: 2 KQYHKF---QRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----- 50 K Y F Q+ + +GE + +L N H K Sbjct: 1563 KLYKDFAQKQKSTVQEEVSKEGEQGAKQHVFQALQYMRKLCNHPALVLNPDHPKYAEVTQ 1622 Query: 51 ------------VHDEKIKALEVIIEKA---------------------------NAAPI 71 H K+ +L+ ++ + + Sbjct: 1623 YLASRKSDLKSIEHSPKLLSLQALLLECGIGVNDSDYSKSKRKQQQSLISSEGVISEHRA 1682 Query: 72 IVAYHFNSDLARLQ------------KAFPQGRTLDK-DPCTIQEWN-EGKIPLLFAHPA 117 ++ L ++ G T + ++++N + I +L Sbjct: 1683 LIFCQLKDMLDIVENELLKKYMPSVTYMRMDGSTDPRDRQGIVRKFNEDPSIDVLLLTTK 1742 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G GLNL G + ++F W+ M + + R + G + V VY LI ++T++ Sbjct: 1743 VGGLGLNLT-GADTVIFVEHDWNP-----MSDLQAMDRAHRLGQTKVVNVYRLITKDTLE 1796 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E ++ + K I ++N Sbjct: 1797 EKIMGLQKFKINIASTIVN 1815 >gi|73952004|ref|XP_856319.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 6 [Canis familiaris] Length = 1573 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 722 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 781 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 782 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 841 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 842 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 895 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 896 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 939 >gi|328863716|gb|EGG12815.1| hypothetical protein MELLADRAFT_46455 [Melampsora larici-populina 98AG31] Length = 1261 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 70/196 (35%), Gaps = 31/196 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHD-----------EKIKALEVIIEK--ANAAPIIVAY 75 ++ ++ N ++E + D K + L+ ++ K A +++ + Sbjct: 646 IMQFKKICNHPFTFEEVERTINGPDKPTNDTLWRAAGKFELLDRVLPKLFATGHRVLMFF 705 Query: 76 HFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPL--LFAHPASCGHGL 123 + Q ++ ++ +N + + + G GL Sbjct: 706 QMTQVMDIFQDYCAYRGIKNLRLDGMTKPEERADLLKTFNHPQCDIHLFILSTRAGGLGL 765 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + ++ F W+ + + R + G K+ V V LI +++E ++ + Sbjct: 766 NLQT-ADTVIIFDSDWNPHQ-----DLQAQDRAHRIGQKKEVRVLRLITSKSVEEHIMSK 819 Query: 184 LRTKSTIQDLLLNALK 199 + K + ++ A + Sbjct: 820 AQFKLDMDKKVIQAGR 835 >gi|326483055|gb|EGE07065.1| SWI/SNF family DNA-dependent ATPase Ris1 [Trichophyton equinum CBS 127.97] Length = 1168 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------P 98 K+ I++ + I+ F S L ++ + + Sbjct: 994 SAKVDKTIEILQSLRDSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGSMKPADRND 1053 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + ++ + GLNL + ++ +W+ IE + R + Sbjct: 1054 SVLDFTDNPDCRIMLVSLKAGNSGLNLVA-ASQVIILDPFWNP-----YIEDQAIDRAHR 1107 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V V+ L+ +NT+++ ++ K I + L+ Sbjct: 1108 IGQLRPVMVHRLLVENTVEDRIIALQDKKRQIIEGALDE 1146 >gi|302753248|ref|XP_002960048.1| hypothetical protein SELMODRAFT_139206 [Selaginella moellendorffii] gi|300170987|gb|EFJ37587.1| hypothetical protein SELMODRAFT_139206 [Selaginella moellendorffii] Length = 551 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 64/182 (35%), Gaps = 23/182 (12%) Query: 32 CLQLANGA---VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK 86 +L + + + + K + L ++ ++ + L L+ Sbjct: 352 LHKLCCTHGMLASHSKLRDKDALESAKCQLLVKLLPHLQSAGHRPLIFSQWTGMLDILEW 411 Query: 87 AFPQGRTLDKD----------PCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + ++N+ I + G GLNL G + ++ Sbjct: 412 VLQVMNLSYRRLDGSTQVCERQSLVDDFNKELDIFAFLLSTRAGGQGLNLT-GADTVIIH 470 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ + ++R R + G ++V VY L+ ++T+DE + + K + D +L Sbjct: 471 DVDFNPQ-----MDRQAEDRCHRIGQSKSVTVYRLVTKSTVDENIFGIAQRKLVL-DAVL 524 Query: 196 NA 197 Sbjct: 525 EG 526 >gi|239985588|ref|NP_031716.2| chromodomain-helicase-DNA-binding protein 1 [Mus musculus] gi|109732363|gb|AAI15823.1| Chromodomain helicase DNA binding protein 1 [Mus musculus] gi|148688507|gb|EDL20454.1| chromodomain helicase DNA binding protein 1 [Mus musculus] Length = 1711 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 721 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 780 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 781 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 840 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 841 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 894 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 895 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 938 >gi|308163310|gb|EFO65660.1| DNA-dependent ATPase, putative [Giardia lamblia P15] Length = 1276 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 74/211 (35%), Gaps = 27/211 (12%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DEKIKAL 59 + L +I + + ++ + A+ ++ + K+ L Sbjct: 443 LDKVLRSKSNTSSIGKTSLINIVMQLRKCADHPYLFNGVEPQPFKEGDHIVNVSGKMVVL 502 Query: 60 EVIIEKAN--AAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEG 107 + +I + ++V S L + L+ +Q +N Sbjct: 503 DKLITRIKAINEKVLVFCQMTSMLNIIEDYLRYREYLYCRIDGSTDLETRAKYMQMFNTP 562 Query: 108 --KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + GLNL N ++ + ++ + + V R + + V Sbjct: 563 TNPVFVFLLSTRAGCLGLNLTA-ANHVIIYQQDFNPQA-----DLQAVARAYRLLQTKEV 616 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY L+A+NT+D + +R + K + +L++ Sbjct: 617 FVYRLLAENTVDTRIYERAQLKLGLDNLIIQ 647 >gi|303391164|ref|XP_003073812.1| SNF2 DNA/RNA helicase [Encephalitozoon intestinalis ATCC 50506] gi|303302960|gb|ADM12452.1| SNF2 DNA/RNA helicase [Encephalitozoon intestinalis ATCC 50506] Length = 823 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 75/217 (34%), Gaps = 27/217 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------EKHWKEVHDE 54 + Y + L + ++ + N + + + Sbjct: 293 EWYKMLLKRDLSPLGSTRDPKGMLMNVVMQLRKCCNHPYLFPDAEPEPYTNDKHIIENSG 352 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++E +A + +++ + L L+ + I Sbjct: 353 KMIVLDKLLESLRARGSRVLIFSQMSMMLDILEDYAMFKEYEYCRIDGSTSYKDRTEAID 412 Query: 103 EWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G G+NL + ++ F W+ + ++ R + G Sbjct: 413 AFNAEGSEKFIFLLTTRAGGLGINL-STADTVILFDSDWNPQ-----MDLQAQDRAHRIG 466 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V+ LI++NT++E ++ R K + D+LL Sbjct: 467 QKKQVVVFRLISENTVEERIVYRSLQKLKLDDILLQG 503 >gi|121709100|ref|XP_001272308.1| SNF2 family helicase/ATPase (Swr1), putative [Aspergillus clavatus NRRL 1] gi|119400457|gb|EAW10882.1| SNF2 family helicase/ATPase (Swr1), putative [Aspergillus clavatus NRRL 1] Length = 1687 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 68/179 (37%), Gaps = 11/179 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + K + D K +I + + F + Sbjct: 1352 RLSIAFPDKRLLQYDCGKLQRLD----KLLRDLKAGGHRALIFTQMTKMLDILEQFLNIH 1407 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N + +I S G G+NL G + ++F+ L W+ Sbjct: 1408 GHRYLRLDGTTKVEQRQILTDRFNNDDRILAFILSSRSGGLGINLT-GADTVIFYDLDWN 1466 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y +++ TI+ +L++ K + D+++ + Sbjct: 1467 PA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRLLDDVVIQEGE 1520 >gi|545018|gb|AAC60670.1| homeotic gene regulator [Mus sp.] Length = 1022 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 415 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 474 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 475 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 534 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 535 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 590 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 591 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 639 >gi|12853471|dbj|BAB29753.1| unnamed protein product [Mus musculus] Length = 473 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 63 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 122 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 123 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 182 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 183 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 236 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 237 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 280 >gi|45384402|ref|NP_990272.1| chromodomain-helicase-DNA-binding protein 1 [Gallus gallus] gi|2501846|gb|AAC60282.1| chromo-helicase-DNA-binding on the Z chromosome protein [Gallus gallus] Length = 1808 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + Sbjct: 720 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQH 779 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 780 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 839 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 840 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 893 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 894 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 937 >gi|258573753|ref|XP_002541058.1| hypothetical protein UREG_00572 [Uncinocarpus reesii 1704] gi|237901324|gb|EEP75725.1| hypothetical protein UREG_00572 [Uncinocarpus reesii 1704] Length = 1290 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 68/209 (32%), Gaps = 31/209 (14%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-------------VIIE 64 + E N + ++ + Y + V+ + + Sbjct: 743 KQSERHNLNNILIQLRKCLCHPFVYSNAIEERGVNSTLLHRNLVEASSKLQLLELLLPKL 802 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLL-- 112 + +++ F L ++ + + I ++N P Sbjct: 803 QERGHRVLIFSQFLGFLDIIEDFLDGLGLLHLRLDGSLSSLQRQKRIDQFNAPNSPYFTF 862 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ ++ + + ++R + G +R V V+ L+ Sbjct: 863 LLSTRAGGVGINL-ATADTVIIMDPDFNPHQ-----DIQALSRAHRIGQQRKVLVFQLMT 916 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + T++E ++Q R K + L+ + E Sbjct: 917 KGTVEEKIIQIGRKKMALDQALIGFMDAE 945 >gi|268571107|ref|XP_002640935.1| C. briggsae CBR-SSL-1 protein [Caenorhabditis briggsae] Length = 1874 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 7/122 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F S +++ ++ +N + K+ S G G+NL G + ++F+ Sbjct: 1251 FLSHHGYQYFRLDGTTGVEQRQAMMERFNADSKVFCFILSTRSGGVGVNLT-GADTVIFY 1309 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ ++ R + G R V +Y LI++ TI+E +L++ K + +L + Sbjct: 1310 DSDWNPT-----MDAQAQDRCHRIGQTRNVSIYRLISERTIEENILKKATQKRRLGELAI 1364 Query: 196 NA 197 + Sbjct: 1365 DE 1366 >gi|301097967|ref|XP_002898077.1| chromodomain protein, putative [Phytophthora infestans T30-4] gi|262105438|gb|EEY63490.1| chromodomain protein, putative [Phytophthora infestans T30-4] Length = 1004 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 27/239 (11%), Positives = 72/239 (30%), Gaps = 45/239 (18%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y + L G + + + ++ + N + + Sbjct: 574 QYYRAIYEKNTEFLSRGGRKGDTPSLMNVLMELRKCCNHPFLVKGVEEREVKRLAKQANV 633 Query: 53 ----------------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA------- 87 K+ L+ ++ K +++ F L +Q Sbjct: 634 SKEEIQRQISESLVDTSGKLVLLDKLLPRLKETGHRVLIFSQFKIMLDIIQDYLALRRYN 693 Query: 88 ---FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 T ++ I + + ++ + G G+NL + ++ + W+ + Sbjct: 694 CERIDGNITGNERQSAIDRFCREDSNSFIMLLSTRAGGVGINLTA-ADTVIIYDSDWNPQ 752 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G K++V +Y L+ T + + + K + +L +K + Sbjct: 753 N-----DLQAQARCHRIGQKKSVKIYRLLTAKTYELHMFHKASLKLGLDQAVLGGIKSD 806 >gi|148667386|gb|EDK99802.1| mCG144495 [Mus musculus] Length = 680 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 371 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 430 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 431 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 490 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 491 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 544 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 545 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 586 >gi|19074741|ref|NP_586247.1| similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN REMODELING FACTOR [Encephalitozoon cuniculi GB-M1] gi|19069383|emb|CAD25851.1| similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN REMODELING FACTOR [Encephalitozoon cuniculi GB-M1] Length = 823 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 74/217 (34%), Gaps = 27/217 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------EKHWKEVHDE 54 + Y + L + ++ + N + + + Sbjct: 293 EWYRMLLKRDLSPLGSTRDPKGMLMNVVMQLRKCCNHPYLFPDAEPKPYTNDKHIIENSG 352 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ L+ ++ KA + +++ + L L+ + I Sbjct: 353 KMIVLDKLLASLKAKGSRVLIFSQMSMMLDILEDYAMFREYEYCRIDGSTSYRDRTEAID 412 Query: 103 EWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N L + G G+NL + ++ F W+ + ++ R + G Sbjct: 413 GFNAEGSEKFLFLLTTRAGGLGINL-STADTVILFDSDWNPQ-----MDLQAQDRAHRIG 466 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V V+ LI++NT++E ++ R K + D+LL Sbjct: 467 QKKQVVVFRLISENTVEERIVYRSLQKLKLDDILLQG 503 >gi|83767491|dbj|BAE57630.1| unnamed protein product [Aspergillus oryzae] Length = 1103 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 19/177 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR-----------LQK 86 Y V KI+ I+ + I+ F S L ++ Sbjct: 905 RKYLRRLEKTWVSSAKIEKAMDILRGIQEGEEKTIIFSQFTSLLDLLEVPIVRQGWGYRR 964 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + D++ + + ++ + GLNL + ++ F +W+ Sbjct: 965 YDGSMKPGDRNSAVLDFTDSPDCKIILVSLKAGNSGLNLVA-ASQVIIFDPFWNP----- 1018 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 IE + R + G R V ++ ++ QNT+++ +L+ K + + L+ + I Sbjct: 1019 YIEEQAIDRAHRIGQVREVQIHRILVQNTVEDRILELQDKKRELIEGALDENASKNI 1075 Score = 38.2 bits (87), Expect = 0.63, Method: Composition-based stats. Identities = 4/51 (7%), Positives = 12/51 (23%), Gaps = 6/51 (11%) Query: 1 MKQYHKFQRELYCD----LQGENI--EAFNSASKTVKCLQLANGAVYYDEE 45 ++ Y + L+ + N ++ Q + Sbjct: 669 LELYSSLEARTQLQFNRYLEAGTVGRNYSNILVLLLRLRQACCHPHLITDF 719 >gi|67475316|ref|XP_653352.1| DNA repair protein [Entamoeba histolytica HM-1:IMSS] gi|56470295|gb|EAL47966.1| DNA repair protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 884 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 64/212 (30%), Gaps = 36/212 (16%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------VHDEKIKALEVI------- 62 +G++ + +++N + + + Sbjct: 552 KGKDEKKSCQFQILTALKKVSNHPWLIQDFVKTFPEVLDGILPKGDALWDMELSGKTAFL 611 Query: 63 -----IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEG 107 + + I++ ++ L + + K + +N Sbjct: 612 AKLLAFLRKHKEKIVIVSNYTETLNFIAHHCKKCGYPYIQLDGSVAATKRTQMVNRFNNP 671 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 ++ + + G GLNL G N++ F W+ + + R + G K+ Sbjct: 672 ELDEFIFLLSSKAGGCGLNLVGGANLV-MFDPDWNPAN-----DEQAMGRVWRDGQKKKC 725 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y ++ T++E + QR K + ++ Sbjct: 726 HIYRTLSAGTVEEKMYQRQIKKLELAGKVVEG 757 >gi|302780671|ref|XP_002972110.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii] gi|300160409|gb|EFJ27027.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii] Length = 1011 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 73/239 (30%), Gaps = 52/239 (21%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE------------------------ 44 + + LQ + A + +L + + Sbjct: 389 KNVRLALQDKAKRAR-VLASITALKKLCSHPKLIYDTVRAGGSEAAGFENCMQFFPKEMQ 447 Query: 45 --EKHWKEVHDEKIKALE-------VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 + K+ + K I++ ++ L + + Sbjct: 448 TGRGTPSDGSWVKLSGKMFVLARLLENLRKKTNDRIVLVSNYTQTLDLFAQLCRERNYPY 507 Query: 96 ----------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K +Q++N+ + G GLNL GGN LV F W+ Sbjct: 508 VRLDGSTSIGKRQKLVQKFNDPSQNEFAFLLSSKAGGCGLNL-IGGNRLVLFDPDWNPAN 566 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++ R + G K+ V++Y +A TI+E V QR +K +Q ++ K E Sbjct: 567 -----DKQAAARVWRDGQKKRVYIYRFLATGTIEEKVYQRQMSKEGLQKVISGDSKAEV 620 >gi|115491355|ref|XP_001210305.1| hypothetical protein ATEG_00219 [Aspergillus terreus NIH2624] gi|114197165|gb|EAU38865.1| hypothetical protein ATEG_00219 [Aspergillus terreus NIH2624] Length = 1459 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 73/219 (33%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y + Y L + + + ++ + +N + + Sbjct: 680 LEYYKNILTKNYAALNEGTKGQKQSLLNIMMELKKASNHPFMFPNAEARILEGSTRREDI 739 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + + Sbjct: 740 LRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYMEFRGYQYQRLDGTIA 799 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + +V F W+ + + Sbjct: 800 AASRRLAIEHFNAPGSSDFAFILSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 853 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++T++E V++R R K + Sbjct: 854 AMARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLL 892 >gi|240281108|gb|EER44611.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H143] Length = 1181 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 61/162 (37%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + +H K+ L ++ K N ++ F L + Sbjct: 966 KNDEWMHSGKVDKLCELLRRFKENGDRTLIFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 1025 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ T+ ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 1026 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDVQA 1079 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1080 ENRAHRVGQTRPVEVVRLVTRDTIEEQIYALGQTKLALDQRV 1121 >gi|149636761|ref|XP_001505482.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 1393 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/244 (12%), Positives = 65/244 (26%), Gaps = 55/244 (22%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY---------------YDEEKH 47 Y KF ++ +E + ++ +L + + ++ Sbjct: 381 IYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACTLLGLEGGGFSDQDE 438 Query: 48 WKEVH------------------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA 87 H K+ L +++ + +V L +++ Sbjct: 439 NGTDHYSDINRIGQLPDQTLMEESGKLMFLMALLKRLQREGHQTLVFSQSRKMLDIIERL 498 Query: 88 FPQGRTLD-----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + I + + G GL L +V F Sbjct: 499 LTNTHFKILRVDGTIAQLGEREKRISLFQKNKDYSVFLLTTQVGGVGLTLTA-ATRVVIF 557 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + V R + G K V +Y LI T++E + +R K ++ Sbjct: 558 DPSWNPAT-----DAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLVRQTT 612 Query: 196 NALK 199 K Sbjct: 613 GDKK 616 >gi|50286955|ref|XP_445907.1| hypothetical protein [Candida glabrata CBS 138] gi|74691046|sp|Q6FV37|INO80_CANGA RecName: Full=Putative DNA helicase INO80 gi|49525213|emb|CAG58826.1| unnamed protein product [Candida glabrata] Length = 1484 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 64/163 (39%), Gaps = 19/163 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K+K L+ ++ + N +++ + + +++ + + Sbjct: 1294 SAKLKKLDELLVELKKNDHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDL 1353 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1354 VHDWQTNPEIFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1407 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G + V VY L+ + TI+E + R + K +Q +++ K+T Sbjct: 1408 GQTKQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTKDT 1450 >gi|326469389|gb|EGD93398.1| SWI/SNF family DNA-dependent ATPase Ris1 [Trichophyton tonsurans CBS 112818] Length = 1141 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------P 98 K+ I++ + I+ F S L ++ + + Sbjct: 954 SAKVDKTIEILQSLRDSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGSMKPADRND 1013 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + ++ + GLNL + ++ +W+ IE + R + Sbjct: 1014 SVLDFTDNPDCRIMLVSLKAGNSGLNLVA-ASQVIILDPFWNP-----YIEDQAIDRAHR 1067 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V V+ L+ +NT+++ ++ K I + L+ Sbjct: 1068 IGQLRPVMVHRLLVENTVEDRIIALQDKKRQIIEGALDE 1106 >gi|189529831|ref|XP_688979.3| PREDICTED: DNA repair and recombination protein RAD54B [Danio rerio] Length = 1174 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 61/218 (27%), Gaps = 48/218 (22%) Query: 26 ASKTVKCLQLANGAVYYDEE----------------------------KHWKEVHDEKIK 57 +L N + K+ Sbjct: 848 LVCINALKKLCNHPALLYNTLQVRMCSEKADEMYEGEVKELFPEEYSTGAFSTADSGKLL 907 Query: 58 ALEVIIEKANA----APIIVAYHFNSDLAR---------LQKAFPQGRTLD-KDPCTIQE 103 L ++ +++ + L + G+T + + Sbjct: 908 VLTDLLSAIQHVNRTDRVVLVSNHTQTLDLLQDVCDQIGYKWCRLDGQTPVGQRQKIVDS 967 Query: 104 WNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +N +S G+ L G + LV + + W+ + + R + G K Sbjct: 968 FNSPHSSSFLLLLSSKAGGVGLNLIGASHLVLYDIDWNPAN-----DIQAMARVWRDGQK 1022 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V +Y + +I+E + QR +K + +++ KK Sbjct: 1023 KTVHIYRFLTTGSIEEKIYQRQVSKQGLSGTVVDLTKK 1060 >gi|308498978|ref|XP_003111675.1| CRE-SSL-1 protein [Caenorhabditis remanei] gi|308239584|gb|EFO83536.1| CRE-SSL-1 protein [Caenorhabditis remanei] Length = 1986 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 7/122 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F S +++ ++ +N + K+ S G G+NL G + ++F+ Sbjct: 1288 FLSHHGYQYFRLDGTTGVEQRQAMMERFNADSKVFCFILSTRSGGVGVNLT-GADTVIFY 1346 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ ++ R + G R V +Y LI++ TI+E +L++ K + +L + Sbjct: 1347 DSDWNPT-----MDAQAQDRCHRIGQTRNVSIYRLISERTIEENILKKATQKRRLGELAI 1401 Query: 196 NA 197 + Sbjct: 1402 DE 1403 >gi|254577895|ref|XP_002494934.1| ZYRO0A13244p [Zygosaccharomyces rouxii] gi|238937823|emb|CAR26001.1| ZYRO0A13244p [Zygosaccharomyces rouxii] Length = 1883 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 72/255 (28%), Gaps = 66/255 (25%) Query: 2 KQYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---- 51 + Y F R+ +Q + + +L N H + Sbjct: 1550 QLYEDFSRKQKTVVQKDIENTADTDNKQHIFQALQYMRKLCNHPALVLSPDHPQLKQVES 1609 Query: 52 -------------HDEKIKALEVIIEKA-----------------------NAAPIIVAY 75 + K+ AL ++ + + ++ Sbjct: 1610 YLKQTHMDLHDISNAPKLLALRNLLFECGIGEQDIDRKSPVNQLPSTVNVISQHRALIFC 1669 Query: 76 HFNSDLAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGH 121 L ++++N + I L G Sbjct: 1670 QLKDMLDMVENDLFKRYMPSVTYMRLDGSVEARDRQKVVRKFNEDPSIDCLLLTTKVGGL 1729 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL G + ++F W+ M + + R + G K+ V VY ++ + T++E ++ Sbjct: 1730 GLNLT-GADTVIFVEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRIVTKGTLEEKIM 1783 Query: 182 QRLRTKSTIQDLLLN 196 + K I ++N Sbjct: 1784 GLQKFKMNIASTVVN 1798 >gi|294659674|ref|XP_462077.2| DEHA2G12496p [Debaryomyces hansenii CBS767] gi|199434146|emb|CAG90563.2| DEHA2G12496p [Debaryomyces hansenii] Length = 1405 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 74/224 (33%), Gaps = 37/224 (16%) Query: 4 YHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHW-------------- 48 Y + Y L G + + + + +N +D + Sbjct: 601 YKNIITKNYSALNAGNKGSQISLLNVMSELKKASNHPYLFDGAEERALAKANSNARDNVL 660 Query: 49 --KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + K+ LE ++ K +++ L L G Sbjct: 661 RGIIMSSGKMVLLEQLLTRLKKEGHRVLIFSQMVRMLDILGDYLSIKGYQFQRLDGGIPS 720 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +I +N + G G+NL + +V F W+ + + Sbjct: 721 SQRRISIDHFNAPDSKDFAFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA-----DLQA 774 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 775 MARAHRIGQKNHVSVYRFVSKDTVEEEILERARKKMILEYAIIS 818 >gi|125974243|ref|YP_001038153.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] gi|125714468|gb|ABN52960.1| SNF2-related protein [Clostridium thermocellum ATCC 27405] Length = 375 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 86/206 (41%), Gaps = 26/206 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y KF+++ + GE + + +K + QL + +++ + Sbjct: 192 KEYKKFKKDRVITIDGETLAGDTALTKLLYLRQLTS-------------IYNSNKHQVLK 238 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----DKDPCTIQEWNEGKIPLLFAHPA 117 I +++ ++ Y+F + ++ + + D ++ + + Sbjct: 239 DIFESSNDRFVIFYNFKREFEIIKNICFKIDRPISYINGDGTDLENYENKSNSITLVQYQ 298 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G+NLQ N +++FSL E Q +RI + G R F YYLI +N+I+ Sbjct: 299 AGASGVNLQK-ANRIIYFSLPLSSEFWMQSKKRI-----HRIGQNRTCFYYYLITENSIE 352 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETI 203 E +L+ L+ + D + +KE + Sbjct: 353 EKILEVLKQRR---DFTVELFEKEML 375 >gi|836793|dbj|BAA09277.1| unnamed protein product [Saccharomyces cerevisiae] Length = 778 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 82/220 (37%), Gaps = 36/220 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------VHD 53 K Y ++ L ++ + ++ + ++ Q+ + + E Sbjct: 551 KLY---KKNLQMEISNKKLQ-----NMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLKTS 602 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTI 101 K++ L+ +I + +++ F + L ++ + + Sbjct: 603 GKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQL 662 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++N K + + G G+NL G + +V F W+ + ++ + R + Sbjct: 663 EKFNSSKDKHNIFLLSTRAAGLGINL-VGADTVVLFDSDWNPQ-----VDLQAMDRCHRI 716 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V VY L NTI+ ++L R K ++ +++ K Sbjct: 717 GQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGK 756 >gi|303390899|ref|XP_003073680.1| putative transcriptional activator [Encephalitozoon intestinalis ATCC 50506] gi|303302827|gb|ADM12320.1| putative transcriptional activator [Encephalitozoon intestinalis ATCC 50506] Length = 879 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA-FPQGRTLDK---------DPC 99 K+ L+ ++ KA +++ + + ++ +G T + Sbjct: 720 DSGKMIILDELLPRLKAEGHRLLIYFQMTRMIDLIEDYLVKKGYTYLRLDGSLKASARAD 779 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I++W + + G G+NL + ++F+ W+ Q + R + Sbjct: 780 VIRDWQTNDKFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPTADQ-----QAMDRAHRL 833 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY LI + T++E VL+ K IQ ++++ Sbjct: 834 GQTRDVTVYRLITRGTVEEKVLESANRKDEIQKMVIHG 871 >gi|2645429|gb|AAB87381.1| CHD1 [Homo sapiens] Length = 1709 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 723 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 782 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 783 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 842 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 843 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 896 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 897 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 940 >gi|159117623|ref|XP_001709031.1| DNA-dependent ATPase, putative [Giardia lamblia ATCC 50803] gi|157437146|gb|EDO81357.1| DNA-dependent ATPase, putative [Giardia lamblia ATCC 50803] Length = 1276 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 27/200 (13%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DEKIKALEVIIEKAN--A 68 +I + + ++ + A+ ++ + K+ L+ +I + Sbjct: 454 SSIGKTSLINIVMQLRKCADHPYLFNGVEPQPFKEGDHIVNVSGKMVVLDKLITRIKAIN 513 Query: 69 APIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHP 116 ++V S L + L+ +Q +N P + Sbjct: 514 EKVLVFCQMTSMLNIIEDYLRYREYLYCRIDGSTDLETRAKYMQMFNTPTNPAFVFLLST 573 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLNL N ++ + ++ + + V R + + VFVY L+A+NT+ Sbjct: 574 RAGCLGLNLTA-ANHVIIYQQDFNPQA-----DLQAVARAYRLLQTKEVFVYRLLAENTV 627 Query: 177 DELVLQRLRTKSTIQDLLLN 196 D + +R + K + +L++ Sbjct: 628 DTRIYERAQLKLGLDNLIIQ 647 >gi|327263233|ref|XP_003216425.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Anolis carolinensis] Length = 1803 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 37/226 (16%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 KQY+K R +G + ++ + N + K +AL Sbjct: 723 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFY--NKQEAL 780 Query: 60 EVIIEKAN---------------AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 + +I + + +++ L L + + + Sbjct: 781 QNLIRSSGKLILLDKLLIRLRERGSRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKG 840 Query: 98 ---PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +N + G G+NL + +V F W+ + + Sbjct: 841 ELRKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQA 894 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 895 QARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 940 >gi|189230031|ref|NP_001121509.1| RAD54 homolog B [Xenopus (Silurana) tropicalis] gi|183986491|gb|AAI66345.1| rad54b protein [Xenopus (Silurana) tropicalis] Length = 897 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 74/245 (30%), Gaps = 54/245 (22%) Query: 3 QYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVY------------------- 41 Y K L G + + +L N Sbjct: 543 LYRKLLNSRTVKSCLLGSGESSPH-LVCIGALKKLCNHPFLLFRTIQGKSTNPDQDEHNL 601 Query: 42 ----------YDEEKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKA 87 + E K+ L ++ + + + +++ ++ L LQ Sbjct: 602 YESVAEVFPQDYDGAKISESESGKLLVLSNLLSRIRELSPSERVVLVSNYTQTLNILQDL 661 Query: 88 FPQG----------RTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFF 135 Q + + + +N + + G GLNL G + L+ + Sbjct: 662 CNQHGYSCTRLDGQTPVTQRQHIVDGFNSKYSTDFIFLLSSKAGGVGLNL-IGASHLILY 720 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 L W+ + + R + G + V +Y L+ +++E + QR +K + ++ Sbjct: 721 DLDWNPAN-----DIQAMARVWRDGQRHTVHIYRLLTTGSLEEKIYQRQISKQGLSGAVV 775 Query: 196 NALKK 200 + KK Sbjct: 776 DLTKK 780 >gi|68299795|ref|NP_001261.2| chromodomain-helicase-DNA-binding protein 1 [Homo sapiens] gi|269849549|sp|O14646|CHD1_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1 gi|119616504|gb|EAW96098.1| chromodomain helicase DNA binding protein 1 [Homo sapiens] Length = 1710 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 723 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 782 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 783 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 842 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 843 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 896 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 897 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 940 >gi|50289211|ref|XP_447036.1| hypothetical protein [Candida glabrata CBS 138] gi|49526345|emb|CAG59969.1| unnamed protein product [Candida glabrata] Length = 1904 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 73/254 (28%), Gaps = 65/254 (25%) Query: 2 KQYHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEV---- 51 + Y F ++ ++ + + +L N H + Sbjct: 1575 QLYEDFAKKQKNVVEKDIQNTADVDSKQHIFQALQYMRKLCNHPALVLSNDHPQLKQIQN 1634 Query: 52 -------------HDEKIKALEVIIEKA----------------------NAAPIIVAYH 76 + K+ AL ++ + + ++ Sbjct: 1635 YLKQTGCDLHDIRNAPKLTALRTLLFECGIGEADMDKKVTGEQLLTGSVISQHRALIFCQ 1694 Query: 77 FNSDLARL-------------QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 L + ++++N + I L G G Sbjct: 1695 LKDMLDMIENDLFKRYMPSVSYMRLDGSVDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLG 1754 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL G + ++F W+ M + + R + G K+ V VY ++ + T++E ++ Sbjct: 1755 LNLT-GADTVIFVEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRIVTKGTLEEKIMG 1808 Query: 183 RLRTKSTIQDLLLN 196 + K I ++N Sbjct: 1809 LQKFKMNIASTVVN 1822 >gi|325092395|gb|EGC45705.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H88] Length = 1181 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 61/162 (37%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + +H K+ L ++ K N ++ F L + Sbjct: 966 KNDEWMHSGKVDKLCELLRRFKENGDRTLIFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 1025 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ T+ ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 1026 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDVQA 1079 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1080 ENRAHRVGQTRPVEVVRLVTRDTIEEQIYALGQTKLALDQRV 1121 >gi|317143698|ref|XP_001819632.2| SWI/SNF family DNA-dependent ATPase Ris1 [Aspergillus oryzae RIB40] Length = 1090 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 19/177 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR-----------LQK 86 Y V KI+ I+ + I+ F S L ++ Sbjct: 905 RKYLRRLEKTWVSSAKIEKAMDILRGIQEGEEKTIIFSQFTSLLDLLEVPIVRQGWGYRR 964 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + D++ + + ++ + GLNL + ++ F +W+ Sbjct: 965 YDGSMKPGDRNSAVLDFTDSPDCKIILVSLKAGNSGLNLVA-ASQVIIFDPFWNP----- 1018 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 IE + R + G R V ++ ++ QNT+++ +L+ K + + L+ + I Sbjct: 1019 YIEEQAIDRAHRIGQVREVQIHRILVQNTVEDRILELQDKKRELIEGALDENASKNI 1075 Score = 38.2 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 4/51 (7%), Positives = 12/51 (23%), Gaps = 6/51 (11%) Query: 1 MKQYHKFQRELYCD----LQGENI--EAFNSASKTVKCLQLANGAVYYDEE 45 ++ Y + L+ + N ++ Q + Sbjct: 669 LELYSSLEARTQLQFNRYLEAGTVGRNYSNILVLLLRLRQACCHPHLITDF 719 >gi|302823829|ref|XP_002993563.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii] gi|300138630|gb|EFJ05392.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii] Length = 852 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 78/239 (32%), Gaps = 52/239 (21%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------------EKHWKEVH 52 + + LQ + A + +L + + + KE+H Sbjct: 433 KNVRLALQDKAKRAR-VLASITALKKLCSHPKLIYDTVRAGGSEAAGFENCMQFFPKEMH 491 Query: 53 DEK-----------------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 + + L + K I++ ++ L + + Sbjct: 492 TGRGTPSDGSWVKLSGKMFVLARLLENLRKKTNDRIVLVSNYTQTLDLFAQLCRERNYPY 551 Query: 96 ----------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K +Q++N+ + G GLNL GGN LV F W+ Sbjct: 552 VRLDGSTSIGKRQKLVQKFNDPSQNEFAFLLSSKAGGCGLNL-IGGNRLVLFDPDWNPAN 610 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++ R + G K+ V++Y +A TI+E V QR +K +Q ++ K E Sbjct: 611 -----DKQAAARVWRDGQKKRVYIYRFLATGTIEEKVYQRQISKEGLQKVISGDSKAEV 664 >gi|255946808|ref|XP_002564171.1| Pc22g01270 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591188|emb|CAP97415.1| Pc22g01270 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1198 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 21/162 (12%) Query: 51 VHDEKIKALEVIIEKANAA----PIIVAYHFNSDLA----------RLQKAFPQGRTLDK 96 KI I++ I+ F S L F L + Sbjct: 999 FPSTKITKTLEILQANEDRGLEEKTIIFSQFTSLLDLLEVPLARRGWNHTRFDGSMNLKE 1058 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + N+ ++ + GLNL + ++ F +W+ IE V R Sbjct: 1059 RNAAVTAFTNDPSCKIMLVSLKAGNSGLNLVA-ASHVIMFDPFWNP-----YIEDQAVDR 1112 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R VFV+ L+ +NT+++ ++ K + L+ Sbjct: 1113 AHRIGQVRNVFVHRLLIENTVEDRIVTLQDQKRELISGALDE 1154 >gi|73951135|ref|XP_859122.1| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein 2 (CHD-2) isoform 6 [Canis familiaris] Length = 1836 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 73/233 (31%), Gaps = 42/233 (18%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLV 785 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ L+ ++ + +++ L L + + Sbjct: 786 CECLFNLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQR 845 Query: 98 ----------PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +N + G G+NL + +V F W+ + Sbjct: 846 LDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-- 902 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + R + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 903 ---DLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 952 >gi|302767836|ref|XP_002967338.1| hypothetical protein SELMODRAFT_87168 [Selaginella moellendorffii] gi|300165329|gb|EFJ31937.1| hypothetical protein SELMODRAFT_87168 [Selaginella moellendorffii] Length = 545 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 75/260 (28%), Gaps = 66/260 (25%) Query: 2 KQYHKFQREL---YCDLQGENIEAFN---SASKTVKCLQLANGAVY-------------- 41 + Y ++E + + + N S ++ Q+ + Sbjct: 273 ELYENLRKEYQDRISEYRSKGTLHMNRFIILSMLLRLRQMCDHPALLDSEHLFRVDEEDD 332 Query: 42 ----------------------------YDEEKHWKEVHDEKIKALEVIIEKAN-AAPII 72 + + K+KA +++ + Sbjct: 333 LITEDGSGLKEMREAVRKLQLEAREKQEDFDRSVQEIGQSAKLKAALRVLDMTPRGEKSL 392 Query: 73 VAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGH 121 + + S L ++ + K I+ + + + ++ + G Sbjct: 393 IFSQWTSMLNLIEPELEGAGIQFSRIDGSMSAGKRVAAIKRFSEDPDVVVMLISLRAGGC 452 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + ++ +WW+ E + R + G R V V + + T++E VL Sbjct: 453 GLNLVA-ASRVLLMDMWWNPTT-----EDQAIDRTHRIGQTRPVHVTRFVVKQTVEEHVL 506 Query: 182 QRLRTKSTIQDLLLNALKKE 201 + K + + + E Sbjct: 507 EIQEKKKKLVEFVFGEKSSE 526 >gi|259150076|emb|CAY86879.1| Mot1p [Saccharomyces cerevisiae EC1118] Length = 1842 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 69/239 (28%), Gaps = 62/239 (25%) Query: 14 DLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKE-----------------VHDE 54 D++ I + +L N H + ++ Sbjct: 1525 DIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTGLDLHDIINAP 1584 Query: 55 KIKALEVIIEKA-----------------------NAAPIIVAYHFNSDLAR-------- 83 K+ AL ++ + + ++ L Sbjct: 1585 KLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKK 1644 Query: 84 -----LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 ++++N + I L G GLNL G + ++F Sbjct: 1645 YMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVIFVEH 1703 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY +I + T++E ++ + K I ++N Sbjct: 1704 DWNP-----MNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVN 1757 >gi|258570209|ref|XP_002543908.1| CHD1 protein [Uncinocarpus reesii 1704] gi|237904178|gb|EEP78579.1| CHD1 protein [Uncinocarpus reesii 1704] Length = 1358 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 74/219 (33%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y + Y L G + + + ++ + +N + + Sbjct: 702 LEYYKNILTKNYAALNQGSKGQKQSLLNIMMELKKASNHPFMFANAEERILQGSTRREDA 761 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 762 LRALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMVRMLDILADYMEARNFAYQRLDGTIA 821 Query: 98 ----PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +I+ +N + G G+NL + ++ F W+ + + Sbjct: 822 AGPRRLSIEHFNSPDSTDFAFLLSTRAGGLGINLMT-ADTVILFDSDWNPQA-----DLQ 875 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G + V VY L++++T++E V++R R K + Sbjct: 876 AMARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLL 914 >gi|198416532|ref|XP_002119473.1| PREDICTED: similar to TATA-binding protein-associated factor 172 (ATP-dependent helicase BTAF1) (TBP-associated factor 172) (TAF-172) (TAF(II)170) (B-TFIID transcription factor-associated 170 kDa subunit), partial [Ciona intestinalis] Length = 1335 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 73/225 (32%), Gaps = 52/225 (23%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKE-----------------VHDEKIKALEVIIE 64 + ++ N ++ H + H K+ AL+ ++ Sbjct: 1049 TSHVFQALQYLQKVCNHPLFVLTPSHPQYNAIMTQLKKSKTSLHDVKHASKLTALQQLLL 1108 Query: 65 KA---------------NAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDK 96 N +V + L ++ G ++ Sbjct: 1109 DCGIGKTGDSLSEESVANQHRALVFCQHRNLLNIIENDLLRQLMPGVTYLRLDGGVPSNQ 1168 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N + I LL G GLNL G + ++F W+ M++ + R Sbjct: 1169 RYSIVSKFNNDPSIDLLLLTTKVGGLGLNLT-GADTVIFVEHDWNP-----MVDLQAMDR 1222 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ V VY +I + T++E +L K + + ++ + Sbjct: 1223 AHRIGQKKVVNVYRIITRGTMEEKILGLQEFKLNVANTIVGDDNR 1267 >gi|114600959|ref|XP_517850.2| PREDICTED: chromodomain helicase DNA binding protein 1 [Pan troglodytes] Length = 1710 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 723 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 782 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 783 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 842 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 843 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 896 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 897 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 940 >gi|331244727|ref|XP_003335003.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309313993|gb|EFP90584.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 964 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 27/203 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 QY +R + + KT++ + +N ++ D KE+ K I Sbjct: 697 QYKSLRRFQL----SRDEFFNSGKVKTLQLILASNNNLHADPSSSSKEIDKSK------I 746 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEW-NEGKIPL 111 +++ + + ++ F L L+ + + ++ N+ I + Sbjct: 747 VKQDSPSRFLIFSQFTQMLDILKVVLKLLDVKFLVLTGQTNVTERQSLVDQFTNDPSITV 806 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GLNL + ++ F ++ +R R + G R V V+ LI Sbjct: 807 FLLSTRAGGLGLNLMA-ADTVILFDQDFNP-----HNDRQAEDRAYRLGQTRDVKVFKLI 860 Query: 172 AQNTIDELVLQRLRTKSTIQDLL 194 ++ TI+E +LQ TK I + + Sbjct: 861 SKGTIEEDILQLASTKIEIDNSI 883 >gi|242062862|ref|XP_002452720.1| hypothetical protein SORBIDRAFT_04g031330 [Sorghum bicolor] gi|241932551|gb|EES05696.1| hypothetical protein SORBIDRAFT_04g031330 [Sorghum bicolor] Length = 901 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 7/121 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F + ++ +Q +N K L S G G+NL G + ++F+ Sbjct: 11 FINLYGYTYLRLDGSTPPEERQTLMQRFNTNPKFFLFILSTRSGGVGINL-VGADTVIFY 69 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ +++ R + G R V +Y LI+++TI+E +L++ K + DL++ Sbjct: 70 DSDWNPA-----MDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 124 Query: 196 N 196 Sbjct: 125 Q 125 >gi|301780254|ref|XP_002925544.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda melanoleuca] Length = 1240 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 66/245 (26%), Gaps = 55/245 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 + Y KF ++ +E + ++ +L + Sbjct: 379 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACHLLNLGSVKFSVQG 436 Query: 43 -DEEKHWKEVH-------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 +E + +V K+ L ++++ +V L ++ Sbjct: 437 ANEGEDASDVDHIDQITDDTLMEESGKMIFLIELLKRLRDEGHQTLVFSQSRQILNIIEH 496 Query: 87 AFPQGR-----------TLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 L + I + G GL L +V Sbjct: 497 LLKNRHFKILRIDGTVTHLVEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTA-ATRVVI 555 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 556 FDPSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQT 610 Query: 195 LNALK 199 K Sbjct: 611 TGDKK 615 >gi|301776436|ref|XP_002923633.1| PREDICTED: transcription termination factor 2-like [Ailuropoda melanoleuca] gi|281337997|gb|EFB13581.1| hypothetical protein PANDA_012813 [Ailuropoda melanoleuca] Length = 1157 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 21/173 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------R 92 E + LE I + + +V + S L + + Sbjct: 979 FENTRVSSKISSLLVELEAIRGNSASQKSVVVSQWTSMLQVVAWHLKRHGLTFATIDGSV 1038 Query: 93 TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ +N + ++ ++ G GLNL GGN L + W+ Q +RI Sbjct: 1039 NPKQRMDLVEAFNSSRGPQVMLISLSAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI 1097 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKK 200 + G ++ V V+ I + T++E +L K T+ +L ++KK Sbjct: 1098 -----YRVGQQKDVVVHKFICEGTVEEKILHLQEKKKTLAKQVLSGSGESVKK 1145 >gi|126728045|ref|ZP_01743861.1| hypothetical protein SSE37_18682 [Sagittula stellata E-37] gi|126711010|gb|EBA10060.1| hypothetical protein SSE37_18682 [Sagittula stellata E-37] Length = 492 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 79/211 (37%), Gaps = 25/211 (11%) Query: 2 KQYHKFQRELYCDLQGE----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 K Y ++ + ++ +A + ++ +Q+ + DE + K+ Sbjct: 262 KLYDTYREQARAEVMQGGQLAEDDAEAVLKRLLRLVQVTSNPALVDENYKEEP---GKVA 318 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNE 106 L ++ + + + +IV F + L + + ++ N Sbjct: 319 ELNRLVREATDDGSKVIVWTSFVRNAEWLCRRLAEYGAVRVHGELPIEVRNRAIEDFKNR 378 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I +L A P + GL L N +++ + L+++ Q +RI + KR + Sbjct: 379 EDISVLVATPGAAKEGLTLT-VANHAIYYDRSFSLDDYLQSQDRI-----HRISQKRECY 432 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ LI +TID V L K + LL + Sbjct: 433 IWNLICDDTIDCWVDSLLSAKR-LAAQLLQS 462 >gi|19704721|ref|NP_604283.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19715039|gb|AAL95582.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 892 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 84/213 (39%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E + K + +K Sbjct: 673 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELESKKIISSKKE 728 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + +++ G+T D+ + N+ Sbjct: 729 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 788 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ +E + R + G + VF Sbjct: 789 SRYKVFVMTLKTGGVGLNLVS-ADTIFIYDPWWN-----TTVENQAIDRAYRLGQDKTVF 842 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 843 AYKMIMRNTIEEKILKLQEIKNKLLDDLISEDN 875 >gi|213406015|ref|XP_002173779.1| SNF2 family helicase Swr1 [Schizosaccharomyces japonicus yFS275] gi|212001826|gb|EEB07486.1| SNF2 family helicase Swr1 [Schizosaccharomyces japonicus yFS275] Length = 1276 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 70/180 (38%), Gaps = 19/180 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ ++ + K++ L++++ + +++ L L++ Sbjct: 975 HQICTRLAIAFPDRRLLQYDCGKLQKLDLLLREIVPAGHRVLIFTQMTRVLDILEQFLNI 1034 Query: 91 GRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + +N + +IP+ S G G+NL G + ++F+ W Sbjct: 1035 HGYRYLRLDGATKVEQRQLLTERFNQDERIPVFILSTRSGGLGINLT-GADTVIFYDSDW 1093 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + + R + G R V +Y LI++ T++ +L+R K + +++ + Sbjct: 1094 NPQL-----DAQAQDRSHRIGQTRDVHIYRLISEYTVESNMLKRANQKRMLDKIVIQGGE 1148 >gi|194386618|dbj|BAG61119.1| unnamed protein product [Homo sapiens] Length = 1108 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 71/240 (29%), Gaps = 42/240 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 K Y + + L N + ++ + N + Sbjct: 634 KYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNP 693 Query: 52 ------------HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ KA +++ L L+ R L + Sbjct: 694 AASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYER 753 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +++ + + G G+NL + + F W+ + Sbjct: 754 IDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 810 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +AV VY L+ +N+ + + R K + +L ++ +V Sbjct: 811 ---DLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESNV 867 >gi|307199491|gb|EFN80104.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein [Harpegnathos saltator] Length = 1948 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 66/210 (31%), Gaps = 28/210 (13%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + + N + E Sbjct: 975 KYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTGPNGSYETS 1034 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 K+ L +++K + +++ L L+ + Q++ Sbjct: 1035 ALIKAAGKLVLLSKMLKKLRGDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGAQQF- 1093 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G G+NL + ++ + W+ + +R + G V Sbjct: 1094 -----VFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAFSRAHRIGQANKV 1142 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y + +N+++E V Q + K + L++ Sbjct: 1143 MIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1172 >gi|190407873|gb|EDV11138.1| helicase [Saccharomyces cerevisiae RM11-1a] Length = 1867 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 69/239 (28%), Gaps = 62/239 (25%) Query: 14 DLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKE-----------------VHDE 54 D++ I + +L N H + ++ Sbjct: 1550 DIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTGLDLHDIINAP 1609 Query: 55 KIKALEVIIEKA-----------------------NAAPIIVAYHFNSDLAR-------- 83 K+ AL ++ + + ++ L Sbjct: 1610 KLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKK 1669 Query: 84 -----LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 ++++N + I L G GLNL G + ++F Sbjct: 1670 YMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVIFVEH 1728 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY +I + T++E ++ + K I ++N Sbjct: 1729 DWNP-----MNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVN 1782 >gi|240278991|gb|EER42497.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H143] gi|325090250|gb|EGC43560.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H88] Length = 974 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 67/214 (31%), Gaps = 44/214 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWK----------------------EVHDEKIKA 58 + ++ +L N + KI+ Sbjct: 597 NSESALQLITILKKLCNSPSLLKPRNSDQTPNSTLGALISSLPPTVLRHLSPASSGKIRV 656 Query: 59 LEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ +++ ++ S L L K + ++N Sbjct: 657 LDQLLHNIRHTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRLDGSTPPSKRQGLVDDFN 716 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL G + L+ F + W+ + + R + G K Sbjct: 717 RSSSSSVFAFLLSAKAGGTGLNL-IGASRLILFDVDWNPAT-----DIQAMARIHRDGQK 770 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R VY L+ + ++E + QR TK + D +++ Sbjct: 771 RHCRVYRLVLKGALEEKIWQRQVTKIGLADSVMD 804 >gi|225560239|gb|EEH08521.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 974 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 67/214 (31%), Gaps = 44/214 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWK----------------------EVHDEKIKA 58 + ++ +L N + KI+ Sbjct: 597 NSESALQLITILKKLCNSPSLLKPRNSDQTPNSTLGALISSLPPTVLRHLSPASSGKIRV 656 Query: 59 LEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ +++ ++ S L L K + ++N Sbjct: 657 LDQLLHNIRHTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRLDGSTPPSKRQGLVDDFN 716 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL G + L+ F + W+ + + R + G K Sbjct: 717 RSSSSSVFAFLLSAKAGGTGLNL-IGASRLILFDVDWNPAT-----DIQAMARIHRDGQK 770 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R VY L+ + ++E + QR TK + D +++ Sbjct: 771 RHCRVYRLVLKGALEEKIWQRQVTKIGLADSVMD 804 >gi|154276746|ref|XP_001539218.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150414291|gb|EDN09656.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 959 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 67/214 (31%), Gaps = 44/214 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWK----------------------EVHDEKIKA 58 + ++ +L N + KI+ Sbjct: 582 NSESALQLITILKKLCNSPSLLKPRNSDQTPNSTLGALISSLPPTVLRYLSPASSGKIRV 641 Query: 59 LEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ +++ ++ S L L K + ++N Sbjct: 642 LDQLLHNIRHTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRLDGSTPPSKRQGLVDDFN 701 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL G + L+ F + W+ + + R + G K Sbjct: 702 RSSSSSVFAFLLSAKAGGTGLNL-IGASRLILFDVDWNPAT-----DIQAMARIHRDGQK 755 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R VY L+ + ++E + QR TK + D +++ Sbjct: 756 RHCRVYRLVLKGALEEKIWQRQVTKIGLADSVMD 789 >gi|241958618|ref|XP_002422028.1| DNA helicase, putative [Candida dubliniensis CD36] gi|223645373|emb|CAX40029.1| DNA helicase, putative [Candida dubliniensis CD36] Length = 1366 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 66/159 (41%), Gaps = 19/159 (11%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K+ L+ ++ K I++ + + ++ T++ Sbjct: 1214 SGKLAKLDELLVDLKQGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREM 1273 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +Q W +I + + G GLNL + ++F+ W+ I+ + R + Sbjct: 1274 VQAWQTNPEIFIFMLSTRAGGLGLNLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHRI 1327 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G + V V+ L+ +NTI++ +L+R + K IQ L++ + Sbjct: 1328 GQTKQVKVFRLVTRNTIEQKILERAKEKEEIQKLVVGNM 1366 >gi|109658944|gb|AAI17135.1| Chromodomain helicase DNA binding protein 1 [Homo sapiens] Length = 1709 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 723 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 782 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 783 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 842 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 843 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 896 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 897 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 940 >gi|134109445|ref|XP_776837.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259517|gb|EAL22190.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1045 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 11/156 (7%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-DPCTIQEWNEGKI 109 +H E ++ +N + L R G T K + +N+ K Sbjct: 664 LHSIYQCTEEKVVVVSNWTSTLDLIQGLCKLKRYNYLRLDGSTPPKQRQELVDRFNKDKG 723 Query: 110 P----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL GG+ L+ F W+ + + R + G KR V Sbjct: 724 RQESFVFLLSAKAGGVGLNL-IGGSRLILFDSDWNPST-----DLQAMARIHRDGQKRPV 777 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++Y + N IDE + QR TK+ + D +++ + E Sbjct: 778 YIYRFLTTNAIDEKIYQRQITKTGLSDQMMDQTRTE 813 >gi|256269976|gb|EEU05227.1| Mot1p [Saccharomyces cerevisiae JAY291] Length = 1867 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 69/239 (28%), Gaps = 62/239 (25%) Query: 14 DLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKE-----------------VHDE 54 D++ I + +L N H + ++ Sbjct: 1550 DIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTGLDLHDIINAP 1609 Query: 55 KIKALEVIIEKA-----------------------NAAPIIVAYHFNSDLAR-------- 83 K+ AL ++ + + ++ L Sbjct: 1610 KLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKK 1669 Query: 84 -----LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 ++++N + I L G GLNL G + ++F Sbjct: 1670 YMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVIFVEH 1728 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY +I + T++E ++ + K I ++N Sbjct: 1729 DWNP-----MNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVN 1782 >gi|6325175|ref|NP_015243.1| Mot1p [Saccharomyces cerevisiae S288c] gi|417308|sp|P32333|MOT1_YEAST RecName: Full=TATA-binding protein-associated factor MOT1; Short=TBP-associated factor MOT1; AltName: Full=Modifier of transcription 1 gi|171965|gb|AAA34786.1| Mot1 [Saccharomyces cerevisiae] gi|1147612|gb|AAB68257.1| Mot1p: a putative helicase [Saccharomyces cerevisiae] gi|151942715|gb|EDN61061.1| modifier of transcription [Saccharomyces cerevisiae YJM789] gi|285815459|tpg|DAA11351.1| TPA: Mot1p [Saccharomyces cerevisiae S288c] Length = 1867 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 69/239 (28%), Gaps = 62/239 (25%) Query: 14 DLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKE-----------------VHDE 54 D++ I + +L N H + ++ Sbjct: 1550 DIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTGLDLHDIINAP 1609 Query: 55 KIKALEVIIEKA-----------------------NAAPIIVAYHFNSDLAR-------- 83 K+ AL ++ + + ++ L Sbjct: 1610 KLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKK 1669 Query: 84 -----LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 ++++N + I L G GLNL G + ++F Sbjct: 1670 YMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLT-GADTVIFVEH 1728 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY +I + T++E ++ + K I ++N Sbjct: 1729 DWNP-----MNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVN 1782 >gi|313247391|emb|CBY15642.1| unnamed protein product [Oikopleura dioica] Length = 1498 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 75/221 (33%), Gaps = 35/221 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-------------KHW 48 K Y Y L+ ++ + + ++ ++ N D+ Sbjct: 643 KYYKFVLTRNYEALKVKSGTSLT--NVLMELKKICNHPYLNDKCSESAARLSNNAFEGSE 700 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + K+ ++ +++K +++ L L+ + + Sbjct: 701 LTANCGKLLLMQKMLKKLKEQGHRVLIFSQMTKLLDLLEDYLEYEQYKYERIDGSVTGSI 760 Query: 98 -PCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ + + + G G+NL + ++ + W+ + + Sbjct: 761 RQQAIDRFNKPGSESFIFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAFS 814 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G K V +Y + QN+++E V Q + K + L++ Sbjct: 815 RAHRIGQKNKVLIYRFVTQNSVEERVAQVAKKKMMLNHLVI 855 >gi|297675709|ref|XP_002815806.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Pongo abelii] Length = 1709 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 723 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 782 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 783 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 842 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 843 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 896 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 897 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 940 >gi|114620947|ref|XP_528193.2| PREDICTED: RAD54 homolog B isoform 2 [Pan troglodytes] gi|114620949|ref|XP_001142757.1| PREDICTED: RAD54 homolog B isoform 1 [Pan troglodytes] Length = 910 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 75/249 (30%), Gaps = 57/249 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 ++ Y K LQG + + +L N KE K Sbjct: 556 IELYRKLLNSQVVRFCLQGLLENSPH-LICIGALKKLCNHPCLLFNSIKEKECSSTCDKN 614 Query: 59 LEVIIEK------------------------------------ANAAPIIVAYHFNSDLA 82 E + K +++ ++ L Sbjct: 615 EEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLN 674 Query: 83 RLQKAFPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGN 130 LQ+ + + + + +N + + G GLNL GG+ Sbjct: 675 ILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNL-IGGS 733 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 734 HLILYDIDWNPAT-----DIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGL 788 Query: 191 QDLLLNALK 199 +++ K Sbjct: 789 CGAVVDLTK 797 >gi|209882027|ref|XP_002142451.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66] gi|209558057|gb|EEA08102.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66] Length = 1877 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 70/238 (29%), Gaps = 45/238 (18%) Query: 4 YHKFQRELYCDL------QGENIEAFNSASKTV---KCLQLANGAVYY------------ 42 Y L G+ + N S + + N Sbjct: 1285 YRAIFERNRAFLCKNVTVGGKKVGVGNIPSLMNVEVELRKCCNHPFQVVGVEEREVALCR 1344 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 +E K+ +E ++ K A ++V F L L++ + Sbjct: 1345 TSEERYRKMVELSGKMVLMEKLLPKLKAEGHKVLVFSQFIQTLTLLEELVEHHKWGYERL 1404 Query: 93 ----TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +N + + + G G+NL + ++ F W+ + Sbjct: 1405 DGSIRGSDRSAAITRFNADESDKFIFLLSTRAGGLGINLTS-ADTVIIFDSDWNPQN--- 1460 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKKET 202 + R + G R V VY LI T + + +R K + + + A ++E Sbjct: 1461 --DVQACARAHRIGQTRDVKVYRLITARTYEAEMFERASRKLGLNTAVFHKGAFREEG 1516 >gi|302902557|ref|XP_003048670.1| SNF2 family DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4] gi|256729604|gb|EEU42957.1| SNF2 family DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4] Length = 773 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 26/214 (12%), Positives = 70/214 (32%), Gaps = 29/214 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------KHWKEVHDEK 55 + +R +L + I + + + N + K Sbjct: 478 EEMERAQTLELAKKQIAQKKLGNPLAQLRLVCNSPHNFYNPWNASKDLTVDDSIVTASGK 537 Query: 56 IKALEVIIEK--ANAAPIIVAYHFN------SDLARLQKAFPQGRTL------DKDPCTI 101 + L+ ++ + + +++ F D R + + R + Sbjct: 538 MLLLDRLLPRLFQDDHKVLIFSQFTTQLDILEDYCRELRGWNVCRIDGSVSQESRRTQIA 597 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + + G G+NL + ++ F ++ ++ + R + G Sbjct: 598 DFNTDPEYKVFLLSTRAGGQGINL-ASADTVILFDSDFNPQQ-----DLQAQDRCHRIGQ 651 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V+ L ++T++E +L K ++ L++ Sbjct: 652 TRPVVVFRLATKDTVEESLLLSADAKRRLEKLVI 685 >gi|109078102|ref|XP_001097125.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Macaca mulatta] Length = 1712 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 725 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 784 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 785 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 844 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 845 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 898 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 899 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 942 >gi|70989932|ref|XP_749815.1| SWI/SNF family DNA-dependent ATPase [Aspergillus fumigatus Af293] gi|66847447|gb|EAL87777.1| SWI/SNF family DNA-dependent ATPase, putative [Aspergillus fumigatus Af293] Length = 1005 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 73/216 (33%), Gaps = 26/216 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGA---VYYDEEKHWKEVHDEKIKALEVIIE 64 Q++ LQ E+ S K Q + + Y + + KI I+E Sbjct: 778 QQQWRTVLQPNEGESTQRLSLLRK--QASRSSAARRTYRQALENAWITSSKIDKALEIVE 835 Query: 65 KAN----AAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKI 109 + II+ F S L ++ + L + ++ Sbjct: 836 QIQNDGTGDKIIIFSQFTSLLDLMEIPLQRRGWLFRRYDGSMRLADRHAVVVEFSTNPNC 895 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L+ + GLNL + ++ +W+ +E + R + G +R V VY Sbjct: 896 RLMLVSLRAGNAGLNLTA-ASKVIILDPFWNP-----FVEEQAIGRVHRIGQQRPVHVYR 949 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++ +T+++ + K + L+ TI + Sbjct: 950 ILTPDTVEDRIQNLQDEKRRLVQGALSDAADATIRL 985 >gi|299756092|ref|XP_001829083.2| SHREC complex subunit Mit1 [Coprinopsis cinerea okayama7#130] gi|298411519|gb|EAU92718.2| SHREC complex subunit Mit1 [Coprinopsis cinerea okayama7#130] Length = 1782 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 27/211 (12%), Positives = 75/211 (35%), Gaps = 17/211 (8%) Query: 2 KQYHKFQRELYCDLQGENI--EAFNSASK------TVKCLQLANGAVYYDEEKHWKEVHD 53 + Y L+G A N+ +K + + Y E+ + + Sbjct: 1100 QVYRSILSHNLDLLKGLTQPNRASNALTKGKLNNVLMHLRKCLQHPYLYAEDIEPQGLPP 1159 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-DKDPCTIQEWNEGKI--P 110 +++ + ++ + R+ G T + + E+N+ Sbjct: 1160 DEVHHKLIDASAKLRFLKLLLPKLKARGHRVLLFSQDGSTKGTERQKCMDEFNKPNSEYF 1219 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL + + ++ F ++ + + + R + G K V+ L Sbjct: 1220 IFLLTTRAGGVGINL-FTADTVIIFDPDFNPHQ-----DLQAIARAYRYGQKNTCLVFKL 1273 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +++ +E ++Q + K + L++ + + Sbjct: 1274 MVKDSAEERIMQIGKKKLVLDHLIVQKMDDD 1304 >gi|320581684|gb|EFW95903.1| Nucleosome remodeling factor [Pichia angusta DL-1] Length = 1384 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 72/210 (34%), Gaps = 39/210 (18%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------------VHDEKIKALE 60 G I N ++ K +N +D + + K+ L+ Sbjct: 625 GSQISLLNIMAELKK---ASNHPYLFDGVEEHVLAKVGSHSRENILKGLIMSSGKMVLLD 681 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEGK 108 ++ K + +++ L + + K I +N Sbjct: 682 QLLNKLHRDGHRVLIFSQMVRILDIIGDYLQLKGHSFQRLDGTISSHKRRLAIDHFNAEG 741 Query: 109 IP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G G+NL + ++ F W+ + + + R + G K V Sbjct: 742 SKDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQAMARAHRIGQKNHVM 795 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY ++++T++E VL+R R K ++ +++ Sbjct: 796 VYRFVSKDTVEEQVLERARRKMILEYAIIS 825 >gi|294878780|ref|XP_002768479.1| hypothetical protein Pmar_PMAR022081 [Perkinsus marinus ATCC 50983] gi|239870964|gb|EER01197.1| hypothetical protein Pmar_PMAR022081 [Perkinsus marinus ATCC 50983] Length = 799 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 68/168 (40%), Gaps = 19/168 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG--------- 91 ++ E K++ L ++ + IV + L ++ + Sbjct: 542 FPDRDMIERDCGKMRKLGELLTTLRDGGHKCIVFTQMSKMLDIIEASMNLHGFTYVRLDG 601 Query: 92 -RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + ++ +N KI A + G G+NL G + ++F+ W+ ++ Sbjct: 602 STPVLRRQLVVEAFNKSPKIFAFIASTRAGGVGINLT-GADCVIFYDSDWNPA-----MD 655 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + R + G R V ++ L++ +TI+E + + K + D++++ Sbjct: 656 RQAMDRCHRIGQTRDVHIFRLLSHHTIEENIFHKQLQKRMLDDVVVDE 703 >gi|256846855|ref|ZP_05552310.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_36A2] gi|256717821|gb|EEU31379.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_36A2] Length = 899 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 85/213 (39%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E ++ K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELENKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + +++ G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ +E + R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNLVS-ADTIFIYDPWWN-----TTVENQAIDRAYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLISEDN 882 >gi|255719802|ref|XP_002556181.1| KLTH0H06952p [Lachancea thermotolerans] gi|238942147|emb|CAR30319.1| KLTH0H06952p [Lachancea thermotolerans] Length = 1359 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 69/210 (32%), Gaps = 21/210 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + + + ++ + NG E + + + + Sbjct: 1138 KLYDQAVNQNLTAEGLKREFRSEMEAQKDRLK---NGYKINFETLEPSQKIKQCLDIVRN 1194 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQ-EWNEGKI 109 + + II+ F + LQ + TI+ + + Sbjct: 1195 VFANSRDEKIIIFSQFTTFFDLLQHFIRKELGVQYLRYDGSMDAQSRAATIEGFYRNNER 1254 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 LL + GL L N ++ +W+ +E + R + R V V+ Sbjct: 1255 RLLLISMKAGNAGLTLT-CANHVILVDPFWNP-----FVEEQAMDRCYRISQTREVQVHR 1308 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 L+ ++++++ +L+ + K + + ++ K Sbjct: 1309 LLIKDSVEDRILELQKKKRELVESAMDPNK 1338 Score = 36.3 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 10/43 (23%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 ++ N + ++ Q +H E Sbjct: 987 KKAEKLMKNRSKGSYSNILTLLLRLRQACCHPELVILGEHKSE 1029 >gi|194749805|ref|XP_001957327.1| GF10366 [Drosophila ananassae] gi|190624609|gb|EDV40133.1| GF10366 [Drosophila ananassae] Length = 1635 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1022 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGH 1081 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1082 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLD 1141 Query: 91 -GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N + + + G GLNLQ + +V F W+ + Sbjct: 1142 GTTKAEDRGDLLRKFNAKDSDYFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1196 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1197 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1245 >gi|83774254|dbj|BAE64379.1| unnamed protein product [Aspergillus oryzae] Length = 1590 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 67/179 (37%), Gaps = 11/179 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + K + D K +I + + F + Sbjct: 1259 RLSIAFPDKRLLQYDCGKLQRLD----KLLRDLKAGGHRALIFTQMTKMLDILEQFLNIH 1314 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N +I S G G+NL G + ++F+ L W+ Sbjct: 1315 GHRYLRLDGTTKVEQRQILTDRFNNDSRILAFILSSRSGGLGINLT-GADTVIFYDLDWN 1373 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y +++ TI+ +L++ K + D+++ + Sbjct: 1374 PA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQEGE 1427 >gi|294786039|ref|ZP_06751326.1| Snf2 family protein [Fusobacterium sp. 3_1_27] gi|294486376|gb|EFG33739.1| Snf2 family protein [Fusobacterium sp. 3_1_27] Length = 899 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 85/213 (39%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E ++ K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELENKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + +++ G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ +E + R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNLVS-ADTIFIYDPWWN-----TTVENQAIDRAYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLISEDN 882 >gi|156052901|ref|XP_001592377.1| hypothetical protein SS1G_06618 [Sclerotinia sclerotiorum 1980] gi|154704396|gb|EDO04135.1| hypothetical protein SS1G_06618 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1505 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 77/233 (33%), Gaps = 40/233 (17%) Query: 4 YHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----------- 51 Y Y L +G + + + ++ + +N + + Sbjct: 681 YKNILTRNYAALNEGSKGQKQSLLNIMMELKKASNHPYMFPNAEEKILKGSERRDDQLKG 740 Query: 52 ---HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K + +++ L L + Sbjct: 741 LIASSGKMMLLDRLLAKLKKDNHRVLIFSQMVKMLDILGDYLQLRGYQFQRLDGTVAAGP 800 Query: 98 -PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + + G G+NL + +V F W+ + + + Sbjct: 801 RRQAIDHFNAEDSNDFCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA-----DLQAMA 854 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI-----QDLLLNALKKET 202 R + G K+ V +Y L+++ T++E +L+R R K + Q + + KKE Sbjct: 855 RAHRIGQKKPVSIYRLVSKETVEEEILERARNKLMLEFITIQRGVTDKEKKEL 907 >gi|330800380|ref|XP_003288215.1| hypothetical protein DICPUDRAFT_152429 [Dictyostelium purpureum] gi|325081785|gb|EGC35289.1| hypothetical protein DICPUDRAFT_152429 [Dictyostelium purpureum] Length = 1956 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 70/239 (29%), Gaps = 70/239 (29%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKE-----------------VHDEKIKALEVIIE 64 A + +L + H + H K+ +L+ ++ Sbjct: 1633 ATHIFQALQYLRKLCGHPSFVLNPNHPQYNTIMKEFRMSPQDLLDIGHSPKLVSLKELLL 1692 Query: 65 KA---------------------------------NAAPIIVAYHFNSDLARLQK----- 86 + N +++ L ++ Sbjct: 1693 ECGIGVSSHQQLKSSTSSTSSIIKNEIANEISATTNQHRVLIFAQMKQMLDIVENELFKK 1752 Query: 87 --------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 K + ++N + I +L G GLNL G + ++F Sbjct: 1753 HLPSITYLRMDGSTESMKRHTIVNQFNSDPTIDVLLLTTHVGGLGLNLT-GADTVIFLEH 1811 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY LI T++E ++ + K I + ++N Sbjct: 1812 DWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITTGTLEEKIMGLQKFKLNIANTVIN 1865 >gi|311249889|ref|XP_003123851.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Sus scrofa] Length = 1706 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 717 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 776 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 777 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 836 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 837 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 890 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 891 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 934 >gi|224136306|ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222835143|gb|EEE73578.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 866 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 83/239 (34%), Gaps = 44/239 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYY-------DEEKHWKEV 51 K Y R+ L + A N S ++ + + + EE Sbjct: 299 KVYTSILRKELPKLLALSSSASNHQSLQNMVIQLRKACSHPYLFPGIEPEPYEEGEHLVK 358 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPC 99 K+ L+ ++EK + +++ L + ++ Sbjct: 359 ASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSVRAEERFA 418 Query: 100 TIQEW-----------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I+ + ++ + + G GLNL + ++F+ W+ + + Sbjct: 419 AIRSFSGQSGRSGSESDQNSSFVFMISTRAGGVGLNLVA-ADTVIFYEQDWNPQ-----V 472 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ-----DLLLNALKKET 202 ++ + R + G V L+ +++++E+++QR + K + D ++ +KET Sbjct: 473 DKQALQRAHRIGQMNHVLSINLVTRHSVEEVIMQRAKRKLQLSHDVVGDDVMEEDRKET 531 >gi|312068394|ref|XP_003137194.1| BRM protein [Loa loa] gi|307767650|gb|EFO26884.1| BRM protein [Loa loa] Length = 619 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 75/225 (33%), Gaps = 36/225 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------- 52 Y Q+ L D + A + V +L N ++ + Sbjct: 46 LYQHMQKGLLIDSKHAGGRAL--MNTVVHLRKLCNHPFLFENVEDECREFWKVPDVTGKD 103 Query: 53 ----DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 K + L+ ++ K A+ I++ S + ++ D+ Sbjct: 104 LYRVSGKFELLDRVLPKLKASGHRILMFCQMTSLMTIMEDYLNYREFKYLRLDGSTKPDE 163 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N + + G GLNLQ + ++ F W+ + Sbjct: 164 RGQLLELYNAPNSEYFIFMLSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQD 217 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G R V V L+ N+I+E +L R K + + ++ A K Sbjct: 218 RAHRIGQSREVRVLRLVTVNSIEEKILAAARYKLNVDEKVIQAGK 262 >gi|295671388|ref|XP_002796241.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226284374|gb|EEH39940.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 999 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 70/214 (32%), Gaps = 44/214 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWK----------------------EVHDEKIKA 58 + ++ +L N + + + KI+ Sbjct: 611 NSDSALQLITILKKLCNSPSLLNPKSSDEDSTSTLSSLVASLPSSITRRLTPASSGKIRV 670 Query: 59 LEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ +++ ++ S L L K K + ++N Sbjct: 671 LDQLLHNIRHTTSEKVVLISNYTSTLDLLGKLLTSLSLSFLRLDGSTPAAKRQALVDDFN 730 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL G + LV F + W+ Q + RI + G K Sbjct: 731 RSSSTSVFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDMQAMARI-----HRDGQK 784 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R +Y + + ++E + QR TK + D +++ Sbjct: 785 RHCRIYRFLLKGALEEKIWQRQVTKIGLADSVMD 818 >gi|149726480|ref|XP_001504655.1| PREDICTED: chromodomain helicase DNA binding protein 1 [Equus caballus] Length = 1713 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 724 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 783 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 784 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 843 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 844 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 897 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 898 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 941 >gi|20152037|gb|AAM11378.1| LD39323p [Drosophila melanogaster] Length = 1101 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 71/225 (31%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------EEKH 47 KQY+K + +G+ + ++ + N A E Sbjct: 238 KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQ 297 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ ++ K +++ L L + + Sbjct: 298 TLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGE 357 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 358 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 411 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 412 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 456 >gi|256028234|ref|ZP_05442068.1| SWF/SNF family helicase [Fusobacterium sp. D11] gi|289766166|ref|ZP_06525544.1| SWF/SNF family helicase [Fusobacterium sp. D11] gi|289717721|gb|EFD81733.1| SWF/SNF family helicase [Fusobacterium sp. D11] Length = 899 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 85/213 (39%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ + N + + + E + K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTLSQGNFDKFFVLQAINELRHIVSSP----ELESKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + +++ G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ +E + R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNLVS-ADTIFIYDPWWN-----TTVENQAIDRAYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLISEDN 882 >gi|164659754|ref|XP_001731001.1| hypothetical protein MGL_2000 [Malassezia globosa CBS 7966] gi|159104899|gb|EDP43787.1| hypothetical protein MGL_2000 [Malassezia globosa CBS 7966] Length = 1627 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 67/168 (39%), Gaps = 9/168 (5%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG 91 LQ G + + + V D +I + I+ FN R + Sbjct: 1293 LLQYDCGKLQQLDTLMRRLVTDG---HRVLIFTQMTKVLDILEKFFNYHGYRYLRLDGAT 1349 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + T + + +I S G G+NL G + ++F+ L W+ Q ++R Sbjct: 1350 KVEQRQALTERFNRDSRISAFILSTRSGGLGINL-VGADTVIFYDLDWNAAIESQCMDR- 1407 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V +Y ++++TI+E +L++ K + L++ + Sbjct: 1408 ----AHRIGQTRDVHIYRFVSEHTIEENMLRKANQKRRLDQLVIQEGE 1451 >gi|73952002|ref|XP_856275.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 5 [Canis familiaris] Length = 1702 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 713 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 772 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 773 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 832 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 833 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 886 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 887 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 930 >gi|73952000|ref|XP_856236.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 4 [Canis familiaris] Length = 1701 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 712 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 771 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 772 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 831 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 832 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 885 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 886 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 929 >gi|71004894|ref|XP_757113.1| hypothetical protein UM00966.1 [Ustilago maydis 521] gi|46096494|gb|EAK81727.1| hypothetical protein UM00966.1 [Ustilago maydis 521] Length = 1124 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 17/166 (10%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAY----------HFNSDLARLQKAFPQGRTLDK 96 + K+ A + AN +++ F S + Sbjct: 681 EPELCGKWKVLAGMLAQWHANGDKVLLFSTNLRLLQFIEFFLSREGHNFLRLDGTTPQPR 740 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N + I + + G GLNL N +V F W+ + + R Sbjct: 741 RQQLVNQFNRDASIFVFLISTTAGGTGLNLTS-ANRVVVFDPHWNPSH-----DLQAMDR 794 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V+VY LI +++E++ R K ++ NA K+ Sbjct: 795 AYRFGQSRDVYVYRLIGAGSLEEVIYGRQIYKQQQMEIGYNATKER 840 >gi|237740914|ref|ZP_04571395.1| SWF/SNF family helicase [Fusobacterium sp. 4_1_13] gi|229431211|gb|EEO41423.1| SWF/SNF family helicase [Fusobacterium sp. 4_1_13] Length = 899 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 85/213 (39%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E ++ K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELENKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + +++ G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ +E + R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNLVS-ADTIFIYDPWWN-----TTVENQAIDRAYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLISEDN 882 >gi|6912622|ref|NP_036547.1| DNA repair and recombination protein RAD54B 1 [Homo sapiens] gi|51316548|sp|Q9Y620|RA54B_HUMAN RecName: Full=DNA repair and recombination protein RAD54B; AltName: Full=RAD54 homolog B gi|4959396|gb|AAD34331.1|AF112481_1 RAD54B protein [Homo sapiens] gi|12805023|gb|AAH01965.1| RAD54 homolog B (S. cerevisiae) [Homo sapiens] gi|119612119|gb|EAW91713.1| hCG2009220, isoform CRA_c [Homo sapiens] gi|261859006|dbj|BAI46025.1| RAD54 homolog B [synthetic construct] Length = 910 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 75/249 (30%), Gaps = 57/249 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 ++ Y K LQG + + +L N KE K Sbjct: 556 IELYRKLLNSQVVRFCLQGLLENSPH-LICIGALKKLCNHPCLLFNSIKEKECSSTCDKN 614 Query: 59 LEVIIEK------------------------------------ANAAPIIVAYHFNSDLA 82 E + K +++ ++ L Sbjct: 615 EEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLN 674 Query: 83 RLQKAFPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGN 130 LQ+ + + + + +N + + G GLNL GG+ Sbjct: 675 ILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNL-IGGS 733 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 734 HLILYDIDWNPAT-----DIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGL 788 Query: 191 QDLLLNALK 199 +++ K Sbjct: 789 CGAVVDLTK 797 >gi|34763541|ref|ZP_00144479.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886790|gb|EAA23925.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 899 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 85/213 (39%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E ++ K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELENKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + +++ G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ +E + R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNLVS-ADTIFIYDPWWN-----TTVENQAIDRAYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLISEDN 882 >gi|328786654|ref|XP_624551.3| PREDICTED: DNA repair and recombination protein RAD54B-like [Apis mellifera] Length = 821 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 73/200 (36%), Gaps = 32/200 (16%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHD------------EKIKALEVIIE--KANA 68 + + ++ N + EK+ ++ KI ++ +I+ K Sbjct: 510 ISHLTLITALKKICNHPELFYNEKNDLYLNKVSIKNITRKGYYGKISIVQTLIKNLKKTN 569 Query: 69 APIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN--EGKIPLLFAHP 116 +++ ++ L L++ T I+++N + Sbjct: 570 EKLVLISYYTQTLDLLERVCNMECLQFLRLDGNTTSSTRSKIIEQFNSTNDNNKIFLLSA 629 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL G + L+ F W+ + + R + G K V++ L+ TI Sbjct: 630 KAGGVGLNL-PGASRLILFDSDWNPAS-----DSQAMARIWRDGQKNDVYILRLLTTGTI 683 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + QR K+ + + +++ Sbjct: 684 EEKIFQRQINKANLSETVID 703 >gi|281350318|gb|EFB25902.1| hypothetical protein PANDA_008326 [Ailuropoda melanoleuca] Length = 1566 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 577 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 636 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 637 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 696 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 697 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 750 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 751 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 794 >gi|237833999|ref|XP_002366297.1| SNF2/RAD54 helicase family protein [Toxoplasma gondii ME49] gi|211963961|gb|EEA99156.1| SNF2/RAD54 helicase family protein [Toxoplasma gondii ME49] Length = 1667 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 62/187 (33%), Gaps = 23/187 (12%) Query: 29 TVKCLQLAN--GAVYYDEEKHWKEVHDE-----KIKALEVIIEKANAAPIIVAYHFNSDL 81 + LQ A G ++ E + L I + +V F S L Sbjct: 1467 LSRLLQQAGKRGPDGIMQKIKASEFRSSTKIEALYQELLEIEREDTTVKSLVFSQFCSML 1526 Query: 82 ARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 ++ +G + N+ + +L + G GLNLQ + Sbjct: 1527 DLIEWRLKKGGIHCAKMVGSMSIVSRSNVLYAFNNDPSLKVLLISLKAGGEGLNLQ-IAS 1585 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + WW+ Q I+R QR + V IA+ TI+E +LQ K + Sbjct: 1586 RIFLMDPWWNPAAEMQAIQRAHRIGQRH----KEVIAIRFIAEKTIEERILQLQEKKQLV 1641 Query: 191 QDLLLNA 197 D + A Sbjct: 1642 FDGTVGA 1648 >gi|281338942|gb|EFB14526.1| hypothetical protein PANDA_015067 [Ailuropoda melanoleuca] Length = 1218 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 66/245 (26%), Gaps = 55/245 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 + Y KF ++ +E + ++ +L + Sbjct: 359 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACHLLNLGSVKFSVQG 416 Query: 43 -DEEKHWKEVH-------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 +E + +V K+ L ++++ +V L ++ Sbjct: 417 ANEGEDASDVDHIDQITDDTLMEESGKMIFLIELLKRLRDEGHQTLVFSQSRQILNIIEH 476 Query: 87 AFPQGR-----------TLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 L + I + G GL L +V Sbjct: 477 LLKNRHFKILRIDGTVTHLVEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTA-ATRVVI 535 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 536 FDPSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQT 590 Query: 195 LNALK 199 K Sbjct: 591 TGDKK 595 >gi|238484689|ref|XP_002373583.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] gi|220701633|gb|EED57971.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] Length = 1126 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGR----------T 93 K+ + + KI L ++ K N ++ F + L+ Sbjct: 936 KNNEWMDSGKIDKLCELLKRFKENGDRTLIFSQFTMVMDILEHVLENQHLGFVRLDGRTN 995 Query: 94 LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++E IP+ + G G+NL N +V F ++ + + Sbjct: 996 VEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVVIFDSSFNPQ-----EDVQA 1049 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R V V L+ ++TI+E + +TK + + E Sbjct: 1050 ENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAVAGEDAAE 1098 >gi|312380716|gb|EFR26634.1| hypothetical protein AND_07156 [Anopheles darlingi] Length = 1492 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 72/230 (31%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 917 LYKHMQSKGVLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHIGVQ 976 Query: 53 -----------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K A+ +++ + ++ Sbjct: 977 GTITGPDLYRASGKFELLDRILPKLKASGHRVLLFCQMTQCMTIIEDYLSWRGFGYLRLD 1036 Query: 91 -GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ ++++N + G GLNLQ + +V F W+ + Sbjct: 1037 GTTKSEERGDLLKKFNSKNSDYFLFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1091 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1092 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1140 >gi|300122623|emb|CBK23191.2| unnamed protein product [Blastocystis hominis] Length = 1548 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 31/257 (12%), Positives = 72/257 (28%), Gaps = 65/257 (25%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y L + + + ++ N +E+ Sbjct: 961 QYYKAIYDRNRSFLYKGCKKSTVPSLMHIETQLRKVCNHPFLIKKEEQAALEAQQAQQAQ 1020 Query: 53 ------------------------------------DEKIKALEVIIE--KANAAPIIVA 74 K+ L+ ++ ++ +++ Sbjct: 1021 QAQQAGENGGKTAEGEETAGSSASSGSAVLPPIVSCSGKMVLLDKLLPRLQSEGHRVLIF 1080 Query: 75 YHFNSDLARLQKAFP----------QGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHG 122 F L L++ + I + + + + G G Sbjct: 1081 SQFVKMLDILEEYCQLRAFKVARIDGQTKGNDRQTAIDAFSREDSDCFIFLLSTRAGGLG 1140 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL + +V + W+ + + R + G K+ V VY L+ QNT + + + Sbjct: 1141 INLTA-ADTVVIYDSDWNPQN-----DSQATARCHRIGQKQEVSVYRLLTQNTYEYEMFE 1194 Query: 183 RLRTKSTIQDLLLNALK 199 R K I+ ++L+ K Sbjct: 1195 RASRKLAIESVVLDREK 1211 >gi|165971312|gb|AAI58841.1| Rad54l protein [Rattus norvegicus] Length = 470 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 83/233 (35%), Gaps = 43/233 (18%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y +F R+ + + E + +S S +L N ++ +E Sbjct: 144 ELYKRFLRQAKPEEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDGFEGTLGIF 203 Query: 53 -------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ------ 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 204 PPGYNSKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYV 263 Query: 91 ----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 264 RLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN- 321 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ ++Y L++ TI+E + QR K + +++ Sbjct: 322 ----DEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 370 >gi|193203249|ref|NP_001032980.2| hypothetical protein T23H2.3 [Caenorhabditis elegans] gi|163644490|gb|AAM15608.2|U80033_3 Hypothetical protein T23H2.3 [Caenorhabditis elegans] Length = 1001 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 75/218 (34%), Gaps = 25/218 (11%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK+ + DL + + T K + K+ Sbjct: 775 MKELENLMEKTMADLTIADSDNDEEGVDTNK-----EEPKQPPTRIFEPDFISCKMAKTL 829 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN--E 106 ++ + +++ + S L ++K G + +N + Sbjct: 830 EVVREILEKKEKVVIVSQWTSVLNLVEKHIQAGGHNYTSITGQVLVKDRQERVDSFNQEK 889 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G ++ + G GLNL GGN L+ L W+ QQ +RI + G K+ VF Sbjct: 890 GGAQVMLLSLTAGGVGLNL-IGGNHLIMVDLHWNPALEQQACDRI-----YRMGQKKEVF 943 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ LI + TI++ V+ K + +L ++ Sbjct: 944 IHRLIVKGTIEQRVMDLQEKKLALAASVLEGTATRKLN 981 >gi|66827655|ref|XP_647182.1| myb domain-containing protein [Dictyostelium discoideum AX4] gi|60475337|gb|EAL73272.1| myb domain-containing protein [Dictyostelium discoideum AX4] Length = 3069 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 19/172 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 Y +K + K++ L +++ K ++ L + Sbjct: 1366 LYFPDKRLIQYDCGKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETFLNLHAYTYLRL 1425 Query: 96 -------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 K + +N + KI L S G GLNL G + ++F+ W+ Sbjct: 1426 DGSTKIDKRQVLTERFNTDPKIFLFILSTRSGGLGLNLT-GADTVIFYDTDWNPS----- 1479 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ R + G R V +Y I Q+TI+E +L++ K + +++ A + Sbjct: 1480 MDAQAQDRCHRIGQTREVNIYRFITQHTIEENILKKSNQKRQLDKMVIKAGE 1531 >gi|224046507|ref|XP_002200063.1| PREDICTED: RAD54 homolog B [Taeniopygia guttata] Length = 919 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 77/249 (30%), Gaps = 57/249 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDE-------------- 44 ++ Y K LQG + + +L N + Sbjct: 562 LELYRKLLGSRVITSCLQGRLENSPH-LICIGALKKLCNHPCLLFKAIKEKSCDPMSEEY 620 Query: 45 ------------------EKHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLA 82 + E K++ L ++ + +++ ++ L Sbjct: 621 DESSLYEGVIDVFPQDYTSDTFCETDSGKLQVLVKLLAAIHELNSSERVVLVSNYTQTLN 680 Query: 83 RLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGN 130 LQ + + + +N P + + G GLNL G + Sbjct: 681 VLQDVCKHYGYSYTRLDGHTPVSQRQHIVDTFNSKFSPAFIFLLSSKAGGVGLNL-VGAS 739 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ + + W+ + + R + G K +V +Y L+ +I+E + QR +K + Sbjct: 740 HLILYDIDWNPAT-----DIQAMARVWRDGQKHSVHIYRLLTTGSIEEKIYQRQISKQDL 794 Query: 191 QDLLLNALK 199 +++ K Sbjct: 795 SGAVVDLSK 803 >gi|255555479|ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus communis] gi|223542157|gb|EEF43701.1| DNA repair and recombination protein RAD54B, putative [Ricinus communis] Length = 940 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 71/225 (31%), Gaps = 54/225 (24%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDE--------------------------------- 44 E + + +L N + Sbjct: 475 EETKKSKILAYITALKKLCNHPKLIYDTIRSGTPGTSGFEDCIRFFPPGMFSGRSGTWSG 534 Query: 45 -EKHWKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD------ 95 + W E+ + ++ + + I++ ++ L + + R Sbjct: 535 GDGSWIELSGKMHVLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPHLRLDGA 594 Query: 96 ----KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K + +N+ + + G GLNL GGN LV F W+ + Sbjct: 595 TSIGKRQKLVNRFNDQSKDEFVFLLSSKAGGCGLNL-IGGNRLVLFDPDWNPAN-----D 648 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + R + G K+ V++Y ++ TI+E V QR +K +Q ++ Sbjct: 649 KQAAARIWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVI 693 >gi|296327606|ref|ZP_06870151.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296155280|gb|EFG96052.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 899 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 84/213 (39%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E + K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELESKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + +++ G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ +E + R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNLVS-ADTIFIYDPWWN-----TTVENQAIDRAYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLISEDN 882 >gi|255084682|ref|XP_002504772.1| SNF2 super family [Micromonas sp. RCC299] gi|226520041|gb|ACO66030.1| SNF2 super family [Micromonas sp. RCC299] Length = 1710 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 62/183 (33%), Gaps = 33/183 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH-------------DEKIKALEVII--EKANAAPII 72 ++ ++ + ++ + K+KAL+ ++ +A ++ Sbjct: 1066 LLMQLRKVCCHPFIFGDDAAKAIIGASGGNRVEALIEASGKLKALDEMLPRMRAGGHKVL 1125 Query: 73 VAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCG 120 + F L L++ +L + +N+ + + G Sbjct: 1126 IFSQFTMMLDMLEEFCEARGHAHLRLDGSTSLARRRYETALFNKPDGRHFVYLCSTRAGG 1185 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NLQ + ++ W+ ++ R + G KR V V + N+++E + Sbjct: 1186 LGINLQS-ADTVILADPDWNPT-----YDQQAQDRAHRLGQKRPVTVIRMCHANSVEEGI 1239 Query: 181 LQR 183 L Sbjct: 1240 LAV 1242 >gi|158261897|dbj|BAF83126.1| unnamed protein product [Homo sapiens] Length = 910 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 75/249 (30%), Gaps = 57/249 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 ++ Y K LQG + + +L N KE K Sbjct: 556 IELYRKLLNSQVVRFCLQGLLENSPH-LICIGALKKLCNHPCLLFNSIKEKECSSTCDKN 614 Query: 59 LEVIIEK------------------------------------ANAAPIIVAYHFNSDLA 82 E + K +++ ++ L Sbjct: 615 EEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLN 674 Query: 83 RLQKAFPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGN 130 LQ+ + + + + +N + + G GLNL GG+ Sbjct: 675 ILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNL-IGGS 733 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 734 HLILYDIDWNPAT-----DIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGL 788 Query: 191 QDLLLNALK 199 +++ K Sbjct: 789 CGAVVDLTK 797 >gi|14091823|gb|AAK53826.1|AC011806_3 Putative SWI/SNF related, matrix associated, actin dependent regulator of chromatin [Oryza sativa] gi|15528681|dbj|BAB64747.1| putative DNA-dependent ATPase [Oryza sativa Japonica Group] Length = 1122 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 78/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q++ Y L +++E N+ + ++ + N + Sbjct: 469 QMQKQYYRALLQKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV 528 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ Sbjct: 529 ENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRD 588 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL +++V + W+ + + R Sbjct: 589 ASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVVLYDSDWNPQA-----DLQAQDRA 642 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 643 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGR 685 >gi|167837009|ref|ZP_02463892.1| helicase, Snf2 family protein [Burkholderia thailandensis MSMB43] Length = 711 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 76/200 (38%), Gaps = 21/200 (10%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 L ++ A + ++ ++ + Y +++ V +++ L + A +V Sbjct: 372 FLSDQDQRRLTCALQNMR---MSCNSTYLLDQETDHGVKADELATLFESLFAQPEAKAVV 428 Query: 74 AYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHG 122 + + +F G + P ++ + + + + G Sbjct: 429 FSQWTRTHEIVIRRLKKLGIGYVSFHGGVPSARRPALLERFRDDPDCRVFL-STDAGSTG 487 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ+ + LV L W+ +Q I RI + G ++ V + +A+ TI+E +L Sbjct: 488 LNLQH-ASTLVNMDLPWNPAVLEQRIARI-----HRMGQRKPVRIINYVAKGTIEEGMLS 541 Query: 183 RLRTKSTIQDLLLNALKKET 202 L K ++ +L+ E Sbjct: 542 VLAFKRSLSAGILDGGTGEI 561 >gi|156379220|ref|XP_001631356.1| predicted protein [Nematostella vectensis] gi|156218395|gb|EDO39293.1| predicted protein [Nematostella vectensis] Length = 836 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 72/222 (32%), Gaps = 49/222 (22%) Query: 22 AFNSASKTVKCLQLANGA--------------------------VYYDEEKHWKEVH--- 52 + +L N + E E+ Sbjct: 505 SSTHLECIGALKKLCNHPTLLYSASQGANTLGDEDQVSLYDGLLKLFPECNDASELSIAQ 564 Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K+ L ++E+ + +++ +++ L LQK K Sbjct: 565 SGKLTVLNSMLEEIHCTGERVVLVSNYSQTLDILQKLCTVKKYRYLRLDGSTPTAKRQSL 624 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N + + G GLNL G + L+ + + W+ + + R + Sbjct: 625 VERFNAKHCQDFVFLLSSKAGGVGLNL-IGASRLILYDIDWNPAN-----DLQAMARVWR 678 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G +R V +Y L+ TI+E + QR TK + + + K+ Sbjct: 679 DGQRRRVVIYRLLTTGTIEEKIYQRQTTKQGLSGAVADDRKQ 720 >gi|119494890|ref|XP_001264246.1| dsDNA-dependent ATPase (Rad54b), putative [Neosartorya fischeri NRRL 181] gi|119412408|gb|EAW22349.1| dsDNA-dependent ATPase (Rad54b), putative [Neosartorya fischeri NRRL 181] Length = 969 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 44/214 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE----------------------KHWKEVHDEKIKA 58 + N+ +L N + +H+ KI+ Sbjct: 567 NSENALQLITILKKLCNSPSLLSPKTGDEKPSETIAALLSSLPPNLLRHFSPSCSAKIRV 626 Query: 59 LEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ + + I++ ++ S L L K ++++N Sbjct: 627 LDQLLHNLRTSTSEKIVLVSNYTSTLNMLANLLNSLSLPFLRLDGSTPAQKRQALVEDFN 686 Query: 106 E---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G GLNL G + LV F + W+ + + R + G K Sbjct: 687 RLPPNLCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DVQAMARIHRDGQK 740 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R ++Y ++ + +++E + QR TK + D ++ Sbjct: 741 RHCWIYRVLLKGSLEERIWQRQVTKIGLADSVME 774 >gi|301768523|ref|XP_002919680.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Ailuropoda melanoleuca] Length = 1742 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 753 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 812 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 813 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 872 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 873 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 926 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 927 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 970 >gi|218188726|gb|EEC71153.1| hypothetical protein OsI_02992 [Oryza sativa Indica Group] Length = 997 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 68/245 (27%), Gaps = 58/245 (23%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 ++ Y F + + ++ + + ++ N +E Sbjct: 384 IELYETFMKSNLI---DKTVKGSTFVATML-LQKICNHPQNLTAVDSCEEQLALKENRTL 439 Query: 51 ---------------------VHDEKIKALEVIIE------KANAAPIIVAYHFNSDLAR 83 + K+ + +++ K +++ L Sbjct: 440 QGIVKKLEALIAKNTTKTSNCLKSCKLTFILQLLKTWQEKLKEEGHKVLIFSQTRLMLDE 499 Query: 84 ----------LQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNIL 132 T K I+ + P+ G GLNL + + Sbjct: 500 IEEALTNKGVHFARMDGTVTASKREAIIKGFQSKDGPPIFLMTTKVGGIGLNLTN-ASRV 558 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + W+ Q ++R+ + G ++ V +Y LI TI+E + ++ +K I Sbjct: 559 IIADPSWNPSLDNQCVDRV-----YRIGQEKNVIIYRLITSCTIEERIYEKQVSKEGIFK 613 Query: 193 LLLNA 197 Sbjct: 614 AATEE 618 >gi|209877056|ref|XP_002139970.1| transcription regulatory protein SNF2 [Cryptosporidium muris RN66] gi|209555576|gb|EEA05621.1| transcription regulatory protein SNF2, putative [Cryptosporidium muris RN66] Length = 1464 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 69/210 (32%), Gaps = 28/210 (13%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD-----EKIKALEV 61 Q+ LY +L+ N ++ ++ N + E K L+ Sbjct: 857 LQQYLYKELENNENSGPNVL---MQLRKVCNHPFLFSTEMQLPSDESIIRVCGKFVMLDS 913 Query: 62 IIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 I+ K A +++ L + ++Q +N Sbjct: 914 ILPKLRAAGHRVLIFSQMTRLLSLLEIFLSLRNMTYLRLDGTTLSEDRQNSLQLFNATNS 973 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 P + + G G+NLQ + ++ F W+ + + +R + G + V Sbjct: 974 PYFVFLLSTKAGGFGINLQS-ADTVILFDSDWNPQN-----DEQAQSRAHRIGQTKEVLT 1027 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +T++E +++ K L++ + Sbjct: 1028 LRFVTPDTVEERIMKTAGIKLDKDALIIKS 1057 >gi|168037602|ref|XP_001771292.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162677381|gb|EDQ63852.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1032 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 76/222 (34%), Gaps = 35/222 (15%) Query: 7 FQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYY--------DEEKHWKEV 51 Q++ Y L ++++A N+ + ++ + N + Sbjct: 407 LQKQYYRALLQKDMDAINTGGERKRLLNIAMQLRKCCNHPYLFEGAEPGPPYTTGEHLVD 466 Query: 52 HDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 K+ L+ ++ K +++ L L+ T D Sbjct: 467 TAGKMVLLDKLLPKLKQRQSRVLIFSQMTRLLDILEDYCQYRTYQYCRIDGNTTGDDRES 526 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N + G G+NL +I++ + W+ + ++ R Sbjct: 527 AIDQFNAPNSEKFCFLLSTRAGGLGINL-ATADIVILYDSDWNPQ-----VDLQAQDRAH 580 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 581 RIGQKKEVQVFRFCTEFTIEEKVIERAYKKLALDALVIQQGR 622 >gi|328780249|ref|XP_396786.4| PREDICTED: hypothetical protein LOC413341 [Apis mellifera] Length = 2846 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 67/168 (39%), Gaps = 11/168 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +Q G + + + K + V+I + V F + + Sbjct: 1683 RLIQYDCGKLQ----SLHQLLRKLKSENHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDG 1738 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +D+ ++ +N + +I S G G+NL G + ++F+ W+ ++ Sbjct: 1739 TTKVDQRQVLMERFNGDKRIFCFILSTRSGGVGVNLT-GADTVIFYDSDWNPT-----MD 1792 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V +Y L+++ T++E +L++ K + DL + Sbjct: 1793 AQAQDRCHRIGQTRDVHIYRLVSEKTVEENILKKANQKRLLGDLAIEG 1840 >gi|237745383|ref|ZP_04575864.1| SWF/SNF family helicase [Fusobacterium sp. 7_1] gi|229432612|gb|EEO42824.1| SWF/SNF family helicase [Fusobacterium sp. 7_1] Length = 899 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 84/213 (39%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E + K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELESKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + +++ G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ +E + R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNLVS-ADTIFIYDPWWN-----TTVENQAIDRAYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLISEDN 882 >gi|221486521|gb|EEE24782.1| DNA repair helicase rad5,16, putative [Toxoplasma gondii GT1] Length = 1667 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 62/187 (33%), Gaps = 23/187 (12%) Query: 29 TVKCLQLAN--GAVYYDEEKHWKEVHDE-----KIKALEVIIEKANAAPIIVAYHFNSDL 81 + LQ A G ++ E + L I + +V F S L Sbjct: 1467 LSRLLQQAGKRGPDGIMQKIKASEFRSSTKIEALYQELLEIEREDTTVKSLVFSQFCSML 1526 Query: 82 ARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 ++ +G + N+ + +L + G GLNLQ + Sbjct: 1527 DLIEWRLKKGGIHCAKMVGSMSIVSRSNVLYAFNNDPSLKVLLISLKAGGEGLNLQ-IAS 1585 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + WW+ Q I+R QR + V IA+ TI+E +LQ K + Sbjct: 1586 RIFLMDPWWNPAAEMQAIQRAHRIGQRH----KEVIAIRFIAEKTIEERILQLQEKKQLV 1641 Query: 191 QDLLLNA 197 D + A Sbjct: 1642 FDGTVGA 1648 >gi|68491912|ref|XP_710254.1| potential DNA-dependent ATPase Ino80p [Candida albicans SC5314] gi|68491929|ref|XP_710247.1| potential DNA-dependent ATPase Ino80p [Candida albicans SC5314] gi|74679547|sp|Q59KI4|INO80_CANAL RecName: Full=Putative DNA helicase INO80 gi|46431413|gb|EAK90982.1| potential DNA-dependent ATPase Ino80p [Candida albicans SC5314] gi|46431421|gb|EAK90989.1| potential DNA-dependent ATPase Ino80p [Candida albicans SC5314] Length = 1387 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 66/159 (41%), Gaps = 19/159 (11%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K+ L+ ++ K I++ + + ++ T++ Sbjct: 1235 SGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREM 1294 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +Q W +I + + G GLNL + ++F+ W+ I+ + R + Sbjct: 1295 VQAWQTNPEIFIFMLSTRAGGLGLNLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHRI 1348 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G + V V+ L+ +NTI++ +L+R + K IQ L++ + Sbjct: 1349 GQTKQVKVFRLVTRNTIEQKILERAKEKEEIQKLVVGNM 1387 >gi|296194069|ref|XP_002744792.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Callithrix jacchus] Length = 1713 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 725 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 784 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 785 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 844 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 845 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 898 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 899 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 942 >gi|225681829|gb|EEH20113.1| DNA repair and recombination protein RAD26 [Paracoccidioides brasiliensis Pb03] Length = 1000 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 70/214 (32%), Gaps = 44/214 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWK----------------------EVHDEKIKA 58 + ++ +L N + + + KI+ Sbjct: 612 NSDSALQLITILKKLCNSPSLLNPKSSDEDSTSTLSSLVASLPSSITRRLTPASSGKIRV 671 Query: 59 LEVIIEKANAA---PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 L+ ++ +++ ++ S L L K K + ++N Sbjct: 672 LDQLLHNIRHTTSEKVVLISNYTSTLDLLGKLLTSLSLPFLRLDGSTPAAKRQALVDDFN 731 Query: 106 EGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL G + LV F + W+ Q + RI + G K Sbjct: 732 RSSPTSVFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDMQAMARI-----HRDGQK 785 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R +Y + + ++E + QR TK + D +++ Sbjct: 786 RHCRIYRFLLKGALEEKIWQRQVTKIGLADSVMD 819 >gi|302307844|ref|NP_984605.2| AEL256Cp [Ashbya gossypii ATCC 10895] gi|299789196|gb|AAS52429.2| AEL256Cp [Ashbya gossypii ATCC 10895] Length = 1866 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 73/253 (28%), Gaps = 64/253 (25%) Query: 2 KQYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKE----- 50 + Y F ++ ++ + + +L N + H + Sbjct: 1541 QLYKDFAKKQKNIVERDIENTMELESKNHIFQALQYMRKLCNHPSLVLSKDHPQYNQVQD 1600 Query: 51 ------------VHDEKIKALEVIIEKA---------------------NAAPIIVAYHF 77 H K+ AL ++ + + ++ Sbjct: 1601 YLSQTGMDIHDIAHAPKLGALRNLLLECGIGVQDVDQNSISLPSSENVISQHRALIFCQL 1660 Query: 78 NSDLAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGL 123 L ++++N + I L G GL Sbjct: 1661 KDMLDMIENDLFKKYLPSVTYMRLDGSVESRDRQKVVRKFNEDPSIDCLLLTTKVGGLGL 1720 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL G + ++F W+ M + + R + G K+ V VY +I + +++E ++ Sbjct: 1721 NLT-GADTVIFIEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRIITKGSLEEKIMGL 1774 Query: 184 LRTKSTIQDLLLN 196 + K I ++N Sbjct: 1775 QKFKMNIASTVVN 1787 >gi|325088120|gb|EGC41430.1| chromodomain helicase [Ajellomyces capsulatus H88] Length = 1530 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 72/198 (36%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEKAN--AAPIIVAY 75 ++ + Y + + V+ K++ LE+++ K +++ Sbjct: 950 LMQLRKCLCHPFVYSKAIEERTVNAALSHRNLVEASSKLQLLEMLLPKLQERGHRVLIFS 1009 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F +L ++ L + I E+N P S G G+ Sbjct: 1010 QFLDNLDVMEDFLDGLGLLHRRLDGSMTSLQKQKQIDEFNVPGSPYFAFLLSTRSGGVGI 1069 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + +V ++ + + ++R + G ++ V V+ L+ + + +E ++Q Sbjct: 1070 NL-ATADTVVIMDPDFNPHQ-----DIQALSRAHRIGQRKKVLVFQLVTKGSAEEKIMQM 1123 Query: 184 LRTKSTIQDLLLNALKKE 201 + K + +L+ + E Sbjct: 1124 GKKKMALDQVLIEHMDVE 1141 >gi|322708300|gb|EFY99877.1| ISWI chromatin-remodeling complex ATPase ISW2 [Metarhizium anisopliae ARSEF 23] Length = 869 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 68/214 (31%), Gaps = 29/214 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---KHWKEVHDEKIKALEV 61 + +R +L + + + + + N + V + I Sbjct: 574 EEVERAQTLELAKKQLAQKKLGNPLAQLRLVCNSPHNFYNPWATSTHIPVDESIITCSGK 633 Query: 62 IIEKAN--------AAPIIVAYHFN------SDLARLQKAFPQGRTL------DKDPCTI 101 ++ +++ F D +R + + R + Sbjct: 634 MLLLDRLLQKLFDRGHKVLLFSQFKTQLDILEDYSRELRGWNVCRIDGSVPQDSRRQQIH 693 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N+ L + G G+NL + ++ F ++ ++ + R + G Sbjct: 694 DFNNDADYNLFLLSTRAGGQGINL-ASADTVILFDSDFNPQQ-----DLQAQDRCHRIGQ 747 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V VY L ++T++E +L K ++ L++ Sbjct: 748 TRPVIVYRLATKDTVEESLLMSADAKRRLEKLVI 781 >gi|302667512|ref|XP_003025339.1| SWI/SNF family DNA-dependent ATPase, putative [Trichophyton verrucosum HKI 0517] gi|291189444|gb|EFE44728.1| SWI/SNF family DNA-dependent ATPase, putative [Trichophyton verrucosum HKI 0517] Length = 1167 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------P 98 K+ I++ + I+ F S L ++ + + Sbjct: 997 SAKVDKTIEILQSLRDSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGSMKPADRND 1056 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + ++ + GLNL + ++ +W+ IE + R + Sbjct: 1057 SVLDFTDNPDCRIMLVSLKAGNSGLNLVA-ASQVIILDPFWNP-----YIEDQAIDRAHR 1110 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V V+ L+ +NT+++ ++ K I + L+ Sbjct: 1111 IGQLRPVMVHRLLIENTVEDRIIALQDKKRQIIEGALDE 1149 >gi|238498532|ref|XP_002380501.1| chromodomain helicase (Chd1), putative [Aspergillus flavus NRRL3357] gi|220693775|gb|EED50120.1| chromodomain helicase (Chd1), putative [Aspergillus flavus NRRL3357] Length = 1446 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 76/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 ++ Y + Y L + + + ++ + +N + + Sbjct: 689 LEYYKNILTKNYAALNDGAKGQKQSLLNIMMELKKASNHPFMFPNAEAKILDGSTRREDV 748 Query: 52 ------HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL-QKAFPQGRTLDK------ 96 K+ L+ ++ K + +++ L L + +G T + Sbjct: 749 LRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYMEFRGYTYQRLDGTIP 808 Query: 97 ---DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + +V F W+ + + Sbjct: 809 AASRRLAIEHYNAPGSSDFAFILSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 862 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E V++R R K + Sbjct: 863 AMARAHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLL 901 >gi|154303896|ref|XP_001552354.1| hypothetical protein BC1G_08832 [Botryotinia fuckeliana B05.10] gi|150854416|gb|EDN29608.1| hypothetical protein BC1G_08832 [Botryotinia fuckeliana B05.10] Length = 612 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA----------RLQ 85 G Y K ++ + I+ F + L Sbjct: 426 GHRKYMRYLRKNWQSSGKTDKCVELLEKFQNEGEKTIIFSQFVTFLDLLQVPIGEKGWKC 485 Query: 86 KAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + + I+ + + ++ + GLNL + ++ +W+ Sbjct: 486 ERYDGSINSKRRDEAIKRFQDKPDCNIMLISLKAGNAGLNLTA-ASRVIILDPFWNP--- 541 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALK 199 IE V R + G + V V+ ++ Q T+++ +++ R K ++ + L+ A+K Sbjct: 542 --FIEMQAVDRAYRIGQMKTVQVHRILVQETVEDRIMELQRQKKSLVESALDEGAMK 596 Score = 38.2 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 3/50 (6%), Positives = 10/50 (20%), Gaps = 6/50 (12%) Query: 4 YHKFQRELYCDLQG----ENI--EAFNSASKTVKCLQLANGAVYYDEEKH 47 Y + + + N ++ Q + + Sbjct: 147 YQALKDKTQLQFNKYRKAGTVGKNYSNILVLLLRLRQCCCHPHLIIDLEE 196 >gi|138894942|ref|YP_001125395.1| Patative DNA/RNA helicase [Geobacillus thermodenitrificans NG80-2] gi|196248491|ref|ZP_03147192.1| Non-specific serine/threonine protein kinase [Geobacillus sp. G11MC16] gi|134266455|gb|ABO66650.1| Patative DNA/RNA helicase SNF2 family [Geobacillus thermodenitrificans NG80-2] gi|196212216|gb|EDY06974.1| Non-specific serine/threonine protein kinase [Geobacillus sp. G11MC16] Length = 874 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 78/211 (36%), Gaps = 29/211 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA---VYYDEEKHWKEVHDEKIKALEV 61 + R + + + N + QL + E+ +KEV K + Sbjct: 650 KEIARSMLATKESGQVAILN---MITRLRQLYGHPGAIIPKYEQLSYKEVPKLKETMHII 706 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGR---------TLDKDPCTIQEWNEGKIP-L 111 + ++ F L++ F + +Q +NE + + Sbjct: 707 EAIRQKGEKALIFTEFRKLHFLLKRIFMETYGISVPVIDGDTKNRQLIVQHFNETQGFGI 766 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + P + G GL + N ++ ++ WW+ +E R + G ++ V+VY++I Sbjct: 767 MILSPKAAGVGLTITS-ANHVIHYTRWWNPA-----VENQATDRAYRIGQQKDVYVYHII 820 Query: 172 AQ-------NTIDELVLQRLRTKSTIQDLLL 195 + T++EL+ + L +K + + ++ Sbjct: 821 TRDSSHFPQGTVEELMHELLESKRHLAENVI 851 >gi|73951996|ref|XP_848459.1| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 2 [Canis familiaris] Length = 1711 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 722 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 781 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 782 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 841 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 842 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 895 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 896 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 939 >gi|260495666|ref|ZP_05815790.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_33] gi|260196849|gb|EEW94372.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_33] Length = 899 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 84/213 (39%), Gaps = 25/213 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + ++ Y L+ N + + + E + K + +K Sbjct: 680 RFYEERRKYYYSLLEKNTSSQGNFDKFFVLQAINELRHIVSSP----ELESKKIISSKKE 735 Query: 57 KALEVIIEK-ANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNE 106 +E +IE N ++V ++ S + +++ G+T D+ + N+ Sbjct: 736 VLIENVIEAIENNHKVLVFVNYLSSIESICDSLKENKIKYLKMTGQTKDRQNLVDKFQND 795 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + G GLNL + + + WW+ +E + R + G + VF Sbjct: 796 SRYKVFVMTLKTGGVGLNLVS-ADTIFIYDPWWN-----TTVENQAIDRAYRLGQDKTVF 849 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Y +I +NTI+E +L+ K+ + D L++ Sbjct: 850 AYKMIMRNTIEEKILKLQEIKNKLLDDLISEDN 882 >gi|115781768|ref|XP_783354.2| PREDICTED: similar to steroid receptor-interacting SNF2 domain protein [Strongylocentrotus purpuratus] gi|115939876|ref|XP_001181420.1| PREDICTED: similar to steroid receptor-interacting SNF2 domain protein [Strongylocentrotus purpuratus] Length = 1637 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 9/125 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + + I +N I L + G+NL G N +V Sbjct: 865 RNQTYFRLDGSTAVSEREKMINRFNSPDNKTIMLFLLSTKAGCLGINL-IGANRVVVMDA 923 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G + VY L++ T+++ + R +K + D +++ Sbjct: 924 SWNP-----CHDAQAVCRVYRYGQTKKCHVYRLVSDQTLEKKIYDRQISKKGMSDRVVDE 978 Query: 198 LKKET 202 + E Sbjct: 979 MNPEM 983 >gi|322694287|gb|EFY86121.1| ISWI chromatin-remodeling complex ATPase ISW2 [Metarhizium acridum CQMa 102] Length = 870 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 71/214 (33%), Gaps = 29/214 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------KHWKEVHDEK 55 + +R +L + + + + + N + K Sbjct: 575 EEVERAQTLELAKKQLAQKKLGNPLAQLRLVCNSPHNFYNPWATSTDIPVDESIITCSGK 634 Query: 56 IKALEVIIEK--ANAAPIIVAYHFN------SDLARLQKAFPQGRTL------DKDPCTI 101 + L+ +++K +++ F D +R + + R + Sbjct: 635 MLLLDRLLQKLFDRGHKVLLFSQFKTQLDILEDYSRELRGWNVCRIDGSVPQDSRRQQIH 694 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N+ L + G G+NL + ++ F ++ ++ + R + G Sbjct: 695 DFNNDADYNLFLLSTRAGGQGINL-ASADTVILFDSDFNPQQ-----DLQAQDRCHRIGQ 748 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V VY L ++T++E +L K ++ L++ Sbjct: 749 TRPVIVYRLATKDTVEESLLMSADAKRRLEKLVI 782 >gi|300175679|emb|CBK21222.2| unnamed protein product [Blastocystis hominis] Length = 523 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 73/220 (33%), Gaps = 28/220 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWKEVHD 53 + Y K Y + E + + ++ ++A + D + Sbjct: 247 ELYKKVLVNDYESIVNSRAERSHLLNLLMQLRKVAGHPYLFEGVEDRSLDPMGEHVITNC 306 Query: 54 EKI--KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K+ + K + +++ L L+ I Sbjct: 307 GKMVLLDKLLKRLKEKGSRVLLFSQMRRVLDILEDYCNIRGFEYCRIDGSTESVDREEEI 366 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + G G+NL + ++ + W+ + ++ R + Sbjct: 367 NSFNAENSTKFVFLLSTRAGGLGINL-ATADTVILYDSDWNPQ-----MDLQAEDRAHRI 420 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V VY L+ + T++E++++R + K + L++ + Sbjct: 421 GQKKTVNVYRLVTEGTVEEMIVERAKLKLRLDTLVIQQGR 460 >gi|225559059|gb|EEH07342.1| SHREC complex subunit Mit1 [Ajellomyces capsulatus G186AR] Length = 1530 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 72/198 (36%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEKAN--AAPIIVAY 75 ++ + Y + + V+ K++ LE+++ K +++ Sbjct: 950 LMQLRKCLCHPFVYSKAIEERTVNAALSHRNLVEASSKLQLLEMLLPKLQERGHRVLIFS 1009 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F +L ++ L + I E+N P S G G+ Sbjct: 1010 QFLDNLDVMEDFLDGLGLLHRRLDGSMTSLQKQKQIDEFNVPGSPYFAFLLSTRSGGVGI 1069 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + +V ++ + + ++R + G ++ V V+ L+ + + +E ++Q Sbjct: 1070 NL-ATADTVVIMDPDFNPHQ-----DIQALSRAHRIGQRKKVLVFQLVTKGSAEEKIMQM 1123 Query: 184 LRTKSTIQDLLLNALKKE 201 + K + +L+ + E Sbjct: 1124 GKKKMALDQVLIEHMDVE 1141 >gi|313213982|emb|CBY40778.1| unnamed protein product [Oikopleura dioica] Length = 867 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 74/184 (40%), Gaps = 17/184 (9%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 + +Q G + + ++++ + +I + V F S A Sbjct: 453 TRLIQYDCGKLQTLHDLIYQKL---RPNGHRALIFTQMTKMLDVLERFLSYHALTYSRLD 509 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +K ++ +N + KI + S G G+NL G + ++F+ W+ I Sbjct: 510 GSTAPEKRIQIMETFNRDPKIFCMILSTRSGGVGVNLT-GADTVIFYDSDWNPT-----I 563 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-------LKKE 201 + R + G R V +Y IA++TI+E +L++ K + ++ + LK++ Sbjct: 564 DAQAQDRAHRIGQTRDVHIYRFIAKDTIEENILKKANYKRKLGNVAIEEGRFNIEGLKED 623 Query: 202 TIHV 205 + V Sbjct: 624 QLRV 627 >gi|115436572|ref|NP_001043044.1| Os01g0367900 [Oryza sativa Japonica Group] gi|57012942|sp|Q7G8Y3|ISW2_ORYSJ RecName: Full=Probable chromatin-remodeling complex ATPase chain; AltName: Full=ISW2-like; AltName: Full=Sucrose nonfermenting protein 2 homolog gi|54290802|dbj|BAD61441.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group] gi|57900237|dbj|BAD88342.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group] gi|58737200|dbj|BAD89475.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group] gi|113532575|dbj|BAF04958.1| Os01g0367900 [Oryza sativa Japonica Group] gi|215740512|dbj|BAG97168.1| unnamed protein product [Oryza sativa Japonica Group] gi|222618445|gb|EEE54577.1| hypothetical protein OsJ_01780 [Oryza sativa Japonica Group] Length = 1107 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 78/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q++ Y L +++E N+ + ++ + N + Sbjct: 469 QMQKQYYRALLQKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV 528 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ Sbjct: 529 ENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRD 588 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL +++V + W+ + + R Sbjct: 589 ASIEAFNKPGSEKFVFLLSTRAGGLGINL-ATADVVVLYDSDWNPQA-----DLQAQDRA 642 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 643 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGR 685 >gi|254582196|ref|XP_002497083.1| ZYRO0D15026p [Zygosaccharomyces rouxii] gi|238939975|emb|CAR28150.1| ZYRO0D15026p [Zygosaccharomyces rouxii] Length = 1216 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 67/218 (30%), Gaps = 29/218 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + + + + + Q G V + V K+ + Sbjct: 996 LYDQVVNQGFTQEDLHAEYQREMERQKSRL-QGTRGPVMEN------LVPSTKMLQCMKL 1048 Query: 63 IEKANAA----PIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTIQEW-NE 106 + I+V F + DL + + I + E Sbjct: 1049 VRNVVEKSDFEKILVFSQFTTFFDLFEQFLSKDLQVSYLKYTGSMNSQQRSDIISRFYRE 1108 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + GL L N ++ +W+ +E R + R VF Sbjct: 1109 SDKRVLLISMKAGNSGLTLT-CANHVIIVDPFWNP-----FVEEQAQDRCYRISQTREVF 1162 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V+ L +N++++ + + + K + D ++ K + I+ Sbjct: 1163 VHRLFIKNSVEDRIAELQKRKRDMVDAAMDPSKMDGIN 1200 >gi|167378232|ref|XP_001734726.1| DNA repair and recombination protein RAD54B [Entamoeba dispar SAW760] gi|165903652|gb|EDR29108.1| DNA repair and recombination protein RAD54B, putative [Entamoeba dispar SAW760] Length = 884 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 65/212 (30%), Gaps = 36/212 (16%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------VHDEKIKALEVI------- 62 +G++ + +++N + + + + Sbjct: 552 KGKDEKKSCQFQILTALKKVSNHPWLIQDFVKTFPEVLDGILPKGEALWDMELSGKTAFL 611 Query: 63 -----IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEG 107 + + I++ ++ L + + K + +N Sbjct: 612 AKLLAFLRKHKEKIVIVSNYTETLNFIAHHCKKCGYPYIQLDGSVAATKRTQMVNRFNNP 671 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 ++ + + G GLNL G N++ F W+ + + R + G K+ Sbjct: 672 ELDEFIFLLSSKAGGCGLNLVGGANLV-MFDPDWNPAN-----DEQAMGRVWRDGQKKKC 725 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y ++ T++E + QR K + ++ Sbjct: 726 HIYRTLSAGTVEEKMYQRQIKKLELAGKVVEG 757 >gi|157134598|ref|XP_001663322.1| chromodomain helicase DNA binding protein [Aedes aegypti] gi|108870420|gb|EAT34645.1| chromodomain helicase DNA binding protein [Aedes aegypti] Length = 340 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 66/222 (29%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD--------EEKHWKEVH 52 K Y + L A + + + + N + E+ Sbjct: 36 KYYKYILTRNFEALNPRGGGGACSLINIMMDLKKCCNHPYLFQAAVEEAPLGPGGSYEIQ 95 Query: 53 D-----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ LE ++++ +++ L L+ + Sbjct: 96 SLTKAAGKLVLLEKMLKQLKEQGHRVLIFSQMTKMLDILEDFLEGFGYKYERIDGGITGT 155 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 156 LRQEAIDRFNAPGAQQFCFLLSTKAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 209 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G V +Y + +N+++E V Q + K + L++ Sbjct: 210 SRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVV 251 >gi|320592804|gb|EFX05213.1| snf2 family helicase ATPase [Grosmannia clavigera kw1407] Length = 901 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 63/217 (29%), Gaps = 33/217 (15%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R ++ I + ++ + N + E + E I+ Sbjct: 596 EIERAQTLEVAKREIGNKKLGNPLMQLRLVCNSPHNFYNPWLAGEEAEADQPIDESIVTA 655 Query: 66 AN---------------AAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPC 99 + +++ F Sbjct: 656 SGKMLLLDRLLPSLFERGHKVLIFSQFKTQLDLLEAYCAELRGWAVCRIDGSVAHADRQS 715 Query: 100 TIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N L + G G+NL + ++ F W+ ++ + R + Sbjct: 716 QIELFNADAAHRLFLLSTRAGGQGINL-ASADTVILFDSDWNPQQ-----DLQAQDRAHR 769 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY L + T++E +L K ++ L++ Sbjct: 770 IGQTRPVVVYRLATKGTVEEELLLSADAKRRLEKLVI 806 >gi|317140694|ref|XP_001818358.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40] Length = 1126 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGR----------T 93 K+ + + KI L ++ K N ++ F + L+ Sbjct: 936 KNNEWMDSGKIDKLCELLKRFKENGDRTLIFSQFTMVMDILEHVLENQHLGFVRLDGRTN 995 Query: 94 LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++E IP+ + G G+NL N +V F ++ + + Sbjct: 996 VEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVVIFDSSFNPQ-----EDVQA 1049 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R V V L+ ++TI+E + +TK + + E Sbjct: 1050 ENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAVAGEDAGE 1098 >gi|146419691|ref|XP_001485806.1| hypothetical protein PGUG_01477 [Meyerozyma guilliermondii ATCC 6260] Length = 1895 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 66/244 (27%), Gaps = 65/244 (26%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------------------- 50 D + + +L N +H K Sbjct: 1576 RLDGKEGGESNTHVFQALQYMRKLCNHPALVVSPEHPKFNEVNEYLRINKSDIRSINHAP 1635 Query: 51 ------------------------VHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR--- 83 ++K++ + ++ L Sbjct: 1636 KLLSLRTLLLECGIGVDDSDYIGKGKNKKLQQQITAEGVISDHRALIFCQLKDMLDIVEN 1695 Query: 84 ----------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++++N + I +L G GLNL G + + Sbjct: 1696 ELLKKHLPSVTYMRLDGSTDPRDRQSIVRKFNEDPSIDVLLLTTKVGGLGLNLT-GADTV 1754 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 +F W+ M + + R + G K+ V VY LI ++T++E ++ + K I Sbjct: 1755 IFVEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRLITKHTLEEKIMGLQKFKMNIAS 1809 Query: 193 LLLN 196 ++N Sbjct: 1810 TVVN 1813 >gi|328767223|gb|EGF77273.1| hypothetical protein BATDEDRAFT_91624 [Batrachochytrium dendrobatidis JAM81] Length = 641 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 56/153 (36%), Gaps = 17/153 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNE 106 ++ I IV F L ++ + +D + ++ Sbjct: 473 HVKAIRISHPGEKTIVFSQFTKMLDLIETPLGQNNIKFTRYDGSMHAKQRDDSIRRFRDD 532 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I ++ GLNL N ++ LWW+ +E + R + G + V Sbjct: 533 PDILVILVSLKCGSLGLNLT-CANRVILTDLWWNPA-----VENQAIDRAHRFGQTKDVI 586 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V+ ++ +N++++ +L+ + K I + L + Sbjct: 587 VHRIMIKNSVEDRILELQQRKQDIANQALGEGE 619 >gi|261329556|emb|CBH12538.1| DNA excision repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 1126 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 19/174 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + K++ L ++ + +V + L ++ Q Sbjct: 783 HFSMRSNRPVNYEGSSKLQTLRQLLKLWQRGGQRALVFSQTRAMLDIIENMCEQESLTYI 842 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + + +N + +I + G G+NL G + +V F W+ Sbjct: 843 RMDGTTNSLRRQELMDRFNEDDRIVVALLTTRVGGVGVNL-IGADRVVIFDPDWNP---- 897 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + R + G R V VY LI+ T++E VL+R K+ + + +L+ K Sbjct: 898 -VTDEQARERAWRIGQTRDVGVYRLISSGTVEEAVLRRQLAKTYVTEKVLHDPK 950 >gi|320583294|gb|EFW97509.1| helicase [Pichia angusta DL-1] Length = 794 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 68/206 (33%), Gaps = 36/206 (17%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHW--------------KEVHDEKIKALEVII---E 64 A +S ++ N E+ + +V KI L ++ Sbjct: 475 ANDSLQLITTFRKICNSPALLTEDAMFAGLCGVDDLRGELGSKVRSAKIILLVKLLKGIY 534 Query: 65 KANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNE---GKIPL 111 K ++V +F L + + ++N+ + Sbjct: 535 KLKQEKVVVVSNFTQTLDVLEKLMNVLELPFTRLDGATPANLRDKIVSDFNKASWDMSFV 594 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 S G GLNL G + L+ F W+ ++ + R + G R V VY L+ Sbjct: 595 FLLSAKSGGMGLNL-VGASRLILFDNDWNPA-----VDLQAMARVHRDGQTRPVHVYRLL 648 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 IDE + QR K+++ D L+ Sbjct: 649 TAGCIDEKIFQRQLIKTSLSDKFLDD 674 >gi|156059716|ref|XP_001595781.1| hypothetical protein SS1G_03871 [Sclerotinia sclerotiorum 1980] gi|154701657|gb|EDO01396.1| hypothetical protein SS1G_03871 [Sclerotinia sclerotiorum 1980 UF-70] Length = 2189 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 64/195 (32%), Gaps = 31/195 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEKAN--AAPIIVAY 75 ++ + Y + K + LE+++ K +++ Sbjct: 1138 LMQLRKCLCHPFLYSSAIEETSLSHEALHRNLIDASSKFQLLEIMLPKLQARGHRVLIFS 1197 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F L ++ + I +N L + G G+ Sbjct: 1198 QFLKQLDLVEDFLNGLELPFQRLDGTVSTLEKQKRIDAFNAPNSKLFAFLLSTRAGGVGI 1257 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + + ++R + G K+ V V+ L+ + + +E ++Q Sbjct: 1258 NL-ATADTVIIMDPDFNPHQ-----DIQALSRAHRIGQKKKVLVFQLVTKGSAEEQIVQV 1311 Query: 184 LRTKSTIQDLLLNAL 198 R K + L+ ++ Sbjct: 1312 GRKKMALDQALIESI 1326 >gi|219128668|ref|XP_002184529.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403979|gb|EEC43928.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 479 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 67/218 (30%), Gaps = 31/218 (14%) Query: 4 YHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------VH 52 Y L A + + ++ + N + Sbjct: 265 YKAIYERNTSFLFKGTKPSNAPSLMNVMMELRKCCNHPYLVKGAEDRILNEAAAKQLVKS 324 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC----------T 100 K+ +E +++K ++V L L++ R + Sbjct: 325 SGKMVLMEKLLQKLFDGGHKVLVFSQMVRVLDLLEELLKLKRYKYERLDGSTTSSARLSA 384 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N ++ + G GLNL +I++ F W+ + + + R + Sbjct: 385 VDRFNRKSCQRFVMLLSTRAGGLGLNLTA-ADIVIIFDSDWNPQN-----DLQAMARAHR 438 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G RAV VY L+ T + + K ++ +L+ Sbjct: 439 IGQTRAVRVYRLLTAKTYEMHMFHSASLKLGLERAVLS 476 >gi|145512399|ref|XP_001442116.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409388|emb|CAK74719.1| unnamed protein product [Paramecium tetraurelia] Length = 1659 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 71/225 (31%), Gaps = 38/225 (16%) Query: 3 QYHKFQRELYCDLQGENIE-AFNSASKTV---KCLQLANGAVYYDEEKHWKEV------- 51 Y L+ + A N+AS + + N E ++ Sbjct: 805 IYKALYDRNKSMLEQGFSQWAANAASLNNLEIQLRKCCNHPFLIQEMQNDLSKGCQTKID 864 Query: 52 -------HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK------ 96 K+ L+ ++ K +++ F L+ L++ + + Sbjct: 865 YINKLVESSGKMILLDKLLNKFRSEGKKMLIFSQFTMMLSILEEYLKFKQVKYEKIDGQI 924 Query: 97 ----DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I +N+ + + G G+NL I+V + W+ + + Sbjct: 925 KARERSNAIDRFNDPSKKREVFLLSTKAGGQGINLTA-AEIVVIYDSDWNPQN-----DV 978 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + V VY LI ++T + + +R K + + Sbjct: 979 QATARAHRIGQSKEVTVYRLITKDTYEAEMFERAIKKLGLDQAIF 1023 >gi|238879929|gb|EEQ43567.1| hypothetical protein CAWG_01805 [Candida albicans WO-1] Length = 1388 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 66/159 (41%), Gaps = 19/159 (11%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K+ L+ ++ K I++ + + ++ T++ Sbjct: 1236 SGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREM 1295 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +Q W +I + + G GLNL + ++F+ W+ I+ + R + Sbjct: 1296 VQAWQTNPEIFIFMLSTRAGGLGLNLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHRI 1349 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G + V V+ L+ +NTI++ +L+R + K IQ L++ + Sbjct: 1350 GQTKQVKVFRLVTRNTIEQKILERAKEKEEIQKLVVGNM 1388 >gi|195146980|ref|XP_002014461.1| GL19201 [Drosophila persimilis] gi|198473550|ref|XP_001356340.2| GA19213 [Drosophila pseudoobscura pseudoobscura] gi|194106414|gb|EDW28457.1| GL19201 [Drosophila persimilis] gi|198138009|gb|EAL33403.2| GA19213 [Drosophila pseudoobscura pseudoobscura] Length = 833 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 20/183 (10%) Query: 34 QLAN-GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 QL N + K + L+ ++ K +++ F L +++ Sbjct: 618 QLCNKHEMTDVRIPDELICDSGKFEFLDTLLPKLKEEGHRVLLFSQFTMMLDIVEEYMRI 677 Query: 91 GRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + I ++N + I + + G G+NL + + + + Sbjct: 678 RKHGFCRLDGATAVKERQDLITDFNVDDNIFVFLLSTKAGGVGINLTA-ADTCIIHDIDF 736 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++ R + G +R V +Y L+A++TI+E +L K ++ + + K Sbjct: 737 NP-----YNDKQAEDRCHRMGQQRPVTIYRLVAESTIEEGILMAAEEKLKLEKEITSTEK 791 Query: 200 KET 202 E Sbjct: 792 GEG 794 >gi|241948531|ref|XP_002416988.1| ATP-dependent chromodomain helicase, putative; chromodomain protein 1, putative [Candida dubliniensis CD36] gi|223640326|emb|CAX44576.1| ATP-dependent chromodomain helicase, putative [Candida dubliniensis CD36] Length = 1406 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 72/226 (31%), Gaps = 37/226 (16%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y + Y L G + + + + +N +D + Sbjct: 601 EYYKNIITKNYAALNAGNRGSQISLLNIMSELKKASNHPYLFDGAEEKVLDKEGSHSREN 660 Query: 53 --------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GR 92 K+ LE ++ K +++ L L Sbjct: 661 TLKGIVMSSGKMVLLEQLLSRLKKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTV 720 Query: 93 TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 K I +N + G G+NL + ++ F W+ + + Sbjct: 721 PSSKRKIAIDHFNALGSKDFAFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DL 774 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 775 QAMARAHRIGQKNHVSVYRFVSKDTVEEQILERARKKMVLEYAIIS 820 >gi|332029993|gb|EGI69818.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein [Acromyrmex echinatior] Length = 1852 Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 66/210 (31%), Gaps = 28/210 (13%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + + N + E Sbjct: 877 KYYKYILTRNFEALNPKGGGQQVSLLNIMMDLKKCCNHPYLFPAASQEAPTGPNGSYETS 936 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 K+ L +++K + +++ L L+ + Q++ Sbjct: 937 ALIKAAGKLVLLSKMLKKLRDDGHRVLIFSQMTKMLDILEDYLEGEGYKYERIDGAQQF- 995 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G G+NL + ++ + W+ + +R + G V Sbjct: 996 -----VFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAFSRAHRIGQANKV 1044 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y + +N+++E V Q + K + L++ Sbjct: 1045 MIYRFVTRNSVEERVTQVAKRKMMLTHLVV 1074 >gi|289617844|emb|CBI55421.1| unnamed protein product [Sordaria macrospora] Length = 1667 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 35/223 (15%) Query: 4 YHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------------ 50 Y Y L N + + ++ +++N + + Sbjct: 723 YKNILTRNYAALSDASNGHKQSLLNIMMELKKVSNHPYMFQGAEERVLNGSTRREDQIKG 782 Query: 51 --VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K + +++ L L + Sbjct: 783 LITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVKMLDILGDYLRVRGYQFQRLDGTIPAGP 842 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + G G+NL + ++ + W+ + + + Sbjct: 843 RRMAINHFNAEGSDDFCFLLSTRAGGLGINLMT-ADTVIIYDSDWNPQA-----DLQAMA 896 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V VY L+A+ TI+E V++R R K ++ L + A Sbjct: 897 RAHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTIQA 939 >gi|327295002|ref|XP_003232196.1| dsDNA-dependent ATPase [Trichophyton rubrum CBS 118892] gi|326465368|gb|EGD90821.1| dsDNA-dependent ATPase [Trichophyton rubrum CBS 118892] Length = 923 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 68/216 (31%), Gaps = 46/216 (21%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEV------------------------HDEKI 56 + ++ ++ N + KI Sbjct: 534 NSESALQLITILKKVCNSPSLLKPKVEDNGKCEDTSMSALLSSLPPSIHRCLAAGSSGKI 593 Query: 57 KALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + L+ ++ + +++ ++ S L L + +++ Sbjct: 594 RVLDQLLYNLQSKTTEKVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATRRQALVED 653 Query: 104 WN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNL G + LV F + W+ + + R + G Sbjct: 654 FNRSPSSSCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DIQAMARIHRDG 707 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR +Y L+ + I+E + QR TK + D +++ Sbjct: 708 QKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMD 743 >gi|324500342|gb|ADY40163.1| Chromodomain-helicase-DNA-binding protein 8 [Ascaris suum] Length = 1811 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 27/231 (11%), Positives = 65/231 (28%), Gaps = 42/231 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--EEKHWKEVHDEKIKAL 59 K Y + L + + ++ + N + EE+ E+ Sbjct: 1331 KYYRAILERNFSHLCKGT-SVPSLMNTMMELRKCCNHPFLINGAEEQIISEMKTVHPDWS 1389 Query: 60 EVIIEKA---------------------NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 E + + + +++ L +++ + Sbjct: 1390 EEELYQHALVQSSGKLVLIAKLLPKLRADGHKVLIFSQMVRVLDIIEEFLVVQNYTFERI 1449 Query: 98 ---------PCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I + + + + G G+NL + ++ F W+ + Sbjct: 1450 DGNVRGDLRQTAIDRFSKKDSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN--- 1505 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V VY LI NT + + + K + +L + Sbjct: 1506 --DLQAQARCHRIGQTKMVKVYRLITCNTYEREMFDKASLKLGLDKAVLQS 1554 >gi|115389796|ref|XP_001212403.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114194799|gb|EAU36499.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1503 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 25/198 (12%), Positives = 63/198 (31%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-------------DEKIKALEVIIEKANAAPIIVAY 75 ++ + Y E + K+ L + +++ Sbjct: 875 LMQLRKCLCHPFVYSEAIEERTGDPAASFRRLVDAAGKLKLLELMLPKLHQRGNRVLIFS 934 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F +L ++ + I E+N P S G G+ Sbjct: 935 QFLDNLNIIEDFLDGLGLRHRRLDGRMTSLEKQKMIDEYNAEDSPYFAFLLSTRSGGVGI 994 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + ++R + G K V V+ L+ + + +E ++Q Sbjct: 995 NL-ATADTVIIMDPDFNPHQDM-----QALSRAHRIGQKNKVLVFQLMTRGSAEEKIMQI 1048 Query: 184 LRTKSTIQDLLLNALKKE 201 + K + +L++ + + Sbjct: 1049 GKKKMVLDHVLIDRMVSD 1066 >gi|320167296|gb|EFW44195.1| SNF2 family DNA-dependent ATPase [Capsaspora owczarzaki ATCC 30864] Length = 2352 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 76/232 (32%), Gaps = 41/232 (17%) Query: 2 KQYHKFQRELYCDL--------QGENIEAFNSASKTVKCLQLANGAVY----------YD 43 + Y E L + + A N + ++ ++ N + Sbjct: 1497 ELYKALLFENVTYLATLSSTGNKPGHKSALN--NVLMELRKILNHPFCRDGIEPEFATEE 1554 Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN------SDLAR-----LQKAFPQ 90 E K+ L +++ + A +++ F D Sbjct: 1555 EMNTALIEASGKLLLLHIMLPRLLAAGHRVLIFSTFKIVLDVLHDYLIANGYPDFCRLDG 1614 Query: 91 GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 D I +N E + + + G G+NL Y + ++ F ++ + Q Sbjct: 1615 DSPSDTRQHLIDRFNRREEGLNIFMLSTRAGGLGINL-YTADTVILFDSDFNPQADQ--- 1670 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G V Y + T++E + R ++K ++ ++++++ K Sbjct: 1671 --QAIARAHRHGQTHPVVAYRFVTVGTVEEAIWTRSQSKLFLEHVVVDSMSK 1720 >gi|168029897|ref|XP_001767461.1| predicted protein [Physcomitrella patens subsp. patens] gi|162681357|gb|EDQ67785.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1569 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 73/227 (32%), Gaps = 38/227 (16%) Query: 2 KQYHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYYDEEKH------------- 47 + Y + DL + + + V+ + N ++ H Sbjct: 644 QYYKWILERNFNDLNKGVRVNQVSLLNIVVELKKCCNHPFLFESADHGYGGDANMNDNNK 703 Query: 48 --WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 + K+ L+ ++ K +++ L L + Sbjct: 704 VQRIVLSSGKLAILDKLLIRLKETNHRVLIFSQMVKMLDILADYMSLRGFQFQRLDGSTR 763 Query: 98 ----PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N + G G+NL + ++ F W+ + + Sbjct: 764 SDLRHQAMEHFNAPGSEDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQ 817 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++R + G + V +Y + +++E +L+R + K + + +L+ L Sbjct: 818 AMSRAHRIGQRDVVNIYRFVISRSVEEDILERAKKK--MANRVLDHL 862 >gi|133778670|gb|AAI33862.1| Hells protein [Danio rerio] Length = 270 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 29/190 (15%) Query: 33 LQLANGAVYYDEEKHWKEVH----------DEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 + N A + K L+ ++ + +++ S Sbjct: 1 KRCCNHAYLIEYPLDPTTGDFKIDEQLVEASGKFLILDRMLPELKKRGHKVLIFSQMTSI 60 Query: 81 LARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 L L D+D + ++ ++ L + G G+NL Sbjct: 61 LDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLSTRAGGLGINLTS-A 119 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ F W+ + + R + G + V VY LI NTIDE +L+R K Sbjct: 120 DTVIIFDSDWNPQA-----DLQAQDRCHRIGQTKPVVVYRLITANTIDEKILERASAKRK 174 Query: 190 IQDLLLNALK 199 ++ ++++ K Sbjct: 175 LEKMVIHKNK 184 >gi|74149099|dbj|BAE32198.1| unnamed protein product [Mus musculus] Length = 895 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 61/222 (27%), Gaps = 34/222 (15%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 591 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 650 Query: 61 VII---------------EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 651 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 710 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 711 MRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 764 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 765 SRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 806 >gi|19114572|ref|NP_593660.1| ATP-dependent DNA helicase Hrp1 [Schizosaccharomyces pombe 972h-] gi|15214054|sp|Q9US25|HRP1_SCHPO RecName: Full=Chromodomain helicase hrp1; AltName: Full=ATP-dependent helicase hrp1 gi|6714825|emb|CAB66168.1| ATP-dependent DNA helicase Hrp1 [Schizosaccharomyces pombe] Length = 1373 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 81/226 (35%), Gaps = 37/226 (16%) Query: 2 KQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYD---------------E 44 + Y + Y L G + + V+ +++N + + Sbjct: 635 EWYKNILTKNYRALTGHTDGRGQLSLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTRED 694 Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 ++ K+ L+ +++ K + +++ L L + + Sbjct: 695 TLRGIIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTI 754 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +I +N P + + G G+NL + ++ F W+ + + Sbjct: 755 PASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINL-NTADTVIIFDSDWNPQA-----DL 808 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 809 QAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYAIIS 854 >gi|307107878|gb|EFN56119.1| hypothetical protein CHLNCDRAFT_144734 [Chlorella variabilis] Length = 1822 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 30/214 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALE 60 + Y Y L + ++ + + + K+K Sbjct: 579 QVYRSILTHSYESLTRGGTSKLK--NVMMELRKAVQHVYLLFHPPTPRPTGPPWKLK--- 633 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIP 110 +++ F L L+ + I +N Sbjct: 634 ------PGHRVLIYSQFLLMLDVLEWYCAARGHSYLRLDGSVGTAERQRRIDAFNGQPSR 687 Query: 111 LLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + G G+NL + +V + W+ + R + G V VY Sbjct: 688 YFLFLLSTRAGGLGINL-ATADTVVLYDSDWNP-----HNDLQAQARAHRLGQSSGVMVY 741 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 L+A+ T++E ++QR + K ++ +++ +K++ Sbjct: 742 RLVARATVEERMMQRAKGKLVLEHVVVRKMKRQP 775 >gi|4056413|gb|AAC97987.1| SN24_HUMAN [Homo sapiens] Length = 661 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 194 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 253 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 254 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 313 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 314 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 369 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 370 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 418 >gi|302773596|ref|XP_002970215.1| hypothetical protein SELMODRAFT_441095 [Selaginella moellendorffii] gi|300161731|gb|EFJ28345.1| hypothetical protein SELMODRAFT_441095 [Selaginella moellendorffii] Length = 1901 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 61/192 (31%), Gaps = 16/192 (8%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 E+ + + + +E + L V + + +IE Sbjct: 1336 EEILKESKRDVLENSGKMVLIMTLL------SLNSSRGEKTLVFSQSL-HTLDLIENFLD 1388 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNL 125 + + + T + +N+ I L + G N+ Sbjct: 1389 TIPLGGSQDVWNKGKEWLRLDGNTTASRRQQIADIFNDPNNTAIKCLLISTKAGSLGTNM 1448 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 G N ++ W+ + + R + G + VFVY L+A T++E + R Sbjct: 1449 T-GANRVIIVDGSWNPTH-----DLQALFRAWRYGQTKPVFVYRLLAYGTMEEKIYNRQL 1502 Query: 186 TKSTIQDLLLNA 197 TK I +L+A Sbjct: 1503 TKEGIAARVLDA 1514 >gi|72391474|ref|XP_846031.1| DNA excision repair protein [Trypanosoma brucei TREU927] gi|62176576|gb|AAX70681.1| DNA excision repair protein, putative [Trypanosoma brucei] gi|70802567|gb|AAZ12472.1| DNA excision repair protein, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 1126 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 19/174 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + K++ L ++ + +V + L ++ Q Sbjct: 783 HFSMRSNRPVNYEGSSKLQTLRQLLKLWQRGGQRALVFSQTRAMLDIIENMCEQESLTYI 842 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + + +N + +I + G G+NL G + +V F W+ Sbjct: 843 RMDGTTNSLRRQELMDRFNEDDRIVVALLTTRVGGVGVNL-IGADRVVIFDPDWNP---- 897 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + R + G R V VY LI+ T++E VL+R K+ + + +L+ K Sbjct: 898 -VTDEQARERAWRIGQTRDVGVYRLISSGTVEEAVLRRQLAKTYVTEKVLHDPK 950 >gi|66808133|ref|XP_637789.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60466223|gb|EAL64285.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 2005 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 72/239 (30%), Gaps = 70/239 (29%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEV-----------------HDEKIKALEVIIE 64 A + +L + +H + H K+ +L+ ++ Sbjct: 1683 ATHIFQALQYLRKLCGHPSFVLNPEHPQYPSIMKEFKLQPNDILDIAHSPKLVSLKELLL 1742 Query: 65 KA---------------------------------NAAPIIVAYHFNSDLARLQK----- 86 + N +++ S L ++ Sbjct: 1743 ECGIGLSNVQQQQHQQQSKAAIAAATANETINESTNQHRVLIFAQMKSMLDIVENELFKK 1802 Query: 87 --------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 K + ++N + I +L G GLNL G + ++F Sbjct: 1803 HLPSVTYLRMDGSVETMKRHSIVNQFNSDPTIDVLLLTTHVGGLGLNLT-GADTVIFLEH 1861 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY LI T++E ++ + K I + ++N Sbjct: 1862 DWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITSGTLEEKIMGLQKFKLNIANTVIN 1915 >gi|307214999|gb|EFN89841.1| ATP-dependent helicase brm [Harpegnathos saltator] Length = 1322 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 70/232 (30%), Gaps = 43/232 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 754 LYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQ 813 Query: 53 -------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 K + L+ I+ K +++ + ++ + Sbjct: 814 GSGVITGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLR 873 Query: 96 --------KDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++++N+ + G GLNLQ + ++ F W+ + Sbjct: 874 LDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ-- 930 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 931 ---DLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 979 >gi|170590139|ref|XP_001899830.1| Associated with TFs and helicases family protein [Brugia malayi] gi|158592749|gb|EDP31346.1| Associated with TFs and helicases family protein [Brugia malayi] Length = 2707 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 27/231 (11%), Positives = 62/231 (26%), Gaps = 42/231 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK--EVHDEKIKAL 59 K Y + L + + ++ + N + EV Sbjct: 1304 KYYRAILERNFSHLCKGT-SVPSLMNAMMELRKCCNHPFLISGAEEQILAEVKAGHPDWS 1362 Query: 60 EVIIEKA---------------------NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 E I + + +++ L +++ + Sbjct: 1363 EDDIYQHALVQSSGKLVLIAKLLPKLRTDGHKVLIFSQMVRVLDIIEEFLVAQNYTFERI 1422 Query: 98 ---------PCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I + + + + G G+NL + ++ F W+ + Sbjct: 1423 DGNVRGDLRQSAIDRFSKKDSDRFIFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN--- 1478 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V VY LI NT + + + K + +L + Sbjct: 1479 --DLQAQARCHRIGQTKMVKVYRLITCNTYEREMFDKASLKLGLDRAVLQS 1527 >gi|317155731|ref|XP_001825326.2| chromodomain helicase (Chd1) [Aspergillus oryzae RIB40] Length = 1513 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 76/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 ++ Y + Y L + + + ++ + +N + + Sbjct: 689 LEYYKNILTKNYAALNDGAKGQKQSLLNIMMELKKASNHPFMFPNAEAKILDGSTRREDV 748 Query: 52 ------HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL-QKAFPQGRTLDK------ 96 K+ L+ ++ K + +++ L L + +G T + Sbjct: 749 LRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYMEFRGYTYQRLDGTIP 808 Query: 97 ---DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + +V F W+ + + Sbjct: 809 AASRRLAIEHYNAPGSSDFAFILSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 862 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E V++R R K + Sbjct: 863 AMARAHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLL 901 >gi|316965584|gb|EFV50276.1| 7 transmembrane receptor [Trichinella spiralis] Length = 2083 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 64/229 (27%), Gaps = 46/229 (20%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYDEEKHW------------ 48 K + E L + ++ Sbjct: 1763 KLFETVAEEARLALDQGTAAGSEFCLTFLDYMRKICAHPAVLYNSLQQAVGRPNVTVLLS 1822 Query: 49 -----------KEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQ-KAFPQGR 92 + K+ L ++ + A ++VA +F L ++ G Sbjct: 1823 CYPACFTDVGVRVGDSGKLTVLAQLLELVRRQYPAEKVVVASNFTESLNIIESYCNGMGF 1882 Query: 93 TLDK---------DPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + + +N L + G GLNL N LV + W+ Sbjct: 1883 SSFRLDGSTDVSSRQRMVDRFNTTTDDTFLFLLSTKAGGMGLNLTA-ANRLVLYDCDWNP 1941 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +R + R + G +R +Y L+ +I+E + QR K I Sbjct: 1942 A-----YDRQAMARIWRDGQRRVCHIYRLLTTGSIEENIFQRQIRKDDI 1985 >gi|156062402|ref|XP_001597123.1| hypothetical protein SS1G_01317 [Sclerotinia sclerotiorum 1980] gi|154696653|gb|EDN96391.1| hypothetical protein SS1G_01317 [Sclerotinia sclerotiorum 1980 UF-70] Length = 892 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 66/207 (31%), Gaps = 29/207 (14%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------KHWKEVHDEKIKALEVI 62 +L + I + + ++ + N + + K+ L+ + Sbjct: 603 ILELARKEISSKKLGNPVMQMRLVCNSPLNFYNPWSAGSVIPLNETLVTSSGKMLLLDRL 662 Query: 63 IEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT--LDKDPCTIQEWNEGK 108 + +++ F +L + G + + + Sbjct: 663 LPSLFSRGHKVLIFSQFKTQLDILEDYARELRGWKVCRIDGSVAQDFRRQQIKEFNEDPD 722 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L + G G+NL + ++ F W+ ++ + R + G + V V+ Sbjct: 723 FKLFLLSTRAGGQGINL-ASADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTKPVVVF 776 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 L + T++E +L K ++ L++ Sbjct: 777 RLATKGTVEESLLMSADAKRRLEKLVI 803 >gi|144369229|dbj|BAF56217.1| OsRad54 [Oryza sativa Japonica Group] Length = 980 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 76/241 (31%), Gaps = 55/241 (22%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE------------------------ 45 + L E + + +L N + Sbjct: 512 KNVKRLISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFS 571 Query: 46 ----------KHWKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLARLQKAFPQ--- 90 W E+ + ++ + I++ ++ L + + Sbjct: 572 GRSGSWTGGGGMWVELSGKMHVLARLLGHLRLKTDDRIVLVSNYTQTLDLFAQLCRERRY 631 Query: 91 -------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 +++K + ++N+ + + G GLNL GGN L+ F W+ Sbjct: 632 PYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNL-VGGNRLILFDPDWNP 690 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++ R + G K+ V++Y ++ TI+E V QR +K +Q ++ + + Sbjct: 691 AN-----DKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQQEQAD 744 Query: 202 T 202 Sbjct: 745 G 745 >gi|156379282|ref|XP_001631387.1| predicted protein [Nematostella vectensis] gi|156218426|gb|EDO39324.1| predicted protein [Nematostella vectensis] Length = 1128 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 11/168 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +Q G + + + K V+I + V F + + Sbjct: 737 RLIQYDCGKLQTLDN----LLRRLKAGKHRVLIFTQMTRMLDVLEKFLNYHGYVYLRLDG 792 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +++ + +N + +I S G G+NL G + +VF+ W+ ++ Sbjct: 793 STRVEQRQILMDRFNADSRIFCFILSTRSGGLGVNLT-GADTVVFYDSDWNPT-----MD 846 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V +Y LI++ T++E +L++ K + D+ + Sbjct: 847 AQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDIAIEG 894 >gi|123434210|ref|XP_001308765.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121890461|gb|EAX95835.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1454 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 30/240 (12%), Positives = 63/240 (26%), Gaps = 45/240 (18%) Query: 4 YHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI----- 56 Y + L N S ++ + N + + + Sbjct: 452 YQSIYTKNMDYLSRGAHKQNCSNLMSICMELRKCCNHPYLIKGAEDQILIERAALLPNKK 511 Query: 57 --------------------KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 ++ K + +++ L L+ R + Sbjct: 512 KKPANFENECLISSAGKMILLDKLLVKLKKDGHRVLIFSQMTKMLDILEDYLRYKRYNYE 571 Query: 97 D----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I +N+ K + + G G+NL + +V + W+ + Sbjct: 572 RIDGSVKTEDRQQAIDRFNDEKSNSFIFLLCTRAGGLGINLVS-ADTVVIYDSDWNPQN- 629 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + R + G K+ V Y I NT + + K + +L K + H Sbjct: 630 ----DIQATARCHRIGQKKKVTAYRFITANTYERKMFDIASLKKGLDTAVLETNKGDWKH 685 >gi|290980924|ref|XP_002673181.1| predicted protein [Naegleria gruberi] gi|284086763|gb|EFC40437.1| predicted protein [Naegleria gruberi] Length = 1101 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 63/221 (28%), Gaps = 29/221 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ Y +F + D+ E+ + + Q+ + + + E I Sbjct: 519 LELYREFLKS--EDVHEVIHESTSPLAAITILKQICCHPDLLPKVQKKSKNIKEMIAMSG 576 Query: 61 VIIE--------KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTI 101 +I ++ + L + + + Sbjct: 577 KMIFLRKLVQQLYEEDEKCLIFSQSSKMLDMIASMLKYINISYTRIDGTINDTKERQRRV 636 Query: 102 QEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N P + GL L ++ F W+ + + R + Sbjct: 637 DSFNSENSPYFCFLLTSQTGSVGLTLTA-ATRVILFDPSWNPTQ-----DNQAADRCYRI 690 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G + V VY LI+ +TI+E V ++ K I + Sbjct: 691 GQLKDVVVYRLISCSTIEEKVYRKQVFKDAIFRSTTEKENQ 731 >gi|255712323|ref|XP_002552444.1| KLTH0C05038p [Lachancea thermotolerans] gi|238933823|emb|CAR22006.1| KLTH0C05038p [Lachancea thermotolerans] Length = 894 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 34/213 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-------------VHDEKIKAL 59 L +I +S + ++ N ++ ++ E + K++ L Sbjct: 558 AQLDLSSITPSSSLALITLFKKICNSPSLISQDSYYLENIKSKSDLTGCLGLDSGKLRVL 617 Query: 60 EVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN 105 ++E +++ ++ L +Q R + ++ +N Sbjct: 618 LALLENIRSSYPQEKVVIVSNYTQTLDIIQNILTSNRFAFTRLDGNTPTKERDRIVRAFN 677 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + S G GLNL G + LV F W+ I+ ++R + G +R Sbjct: 678 TVPSLFAFLLSAKSGGVGLNL-IGASRLVLFDNDWNPA-----IDLQAMSRIHRDGQRRP 731 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y L+ IDE + QR K ++ + Sbjct: 732 CFIYRLLTTGCIDEKIFQRQLMKISLSFRFMGD 764 >gi|242017388|ref|XP_002429171.1| TATA-binding protein-associated factor, putative [Pediculus humanus corporis] gi|212514049|gb|EEB16433.1| TATA-binding protein-associated factor, putative [Pediculus humanus corporis] Length = 1746 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 77/246 (31%), Gaps = 56/246 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGA--VYYDEEKHWKEV--- 51 + Y F R +++ + + N V + ++++ Sbjct: 1433 QLYEDFSRSQAHQSLQDSLSLPSHANTHIFQALRYLQNVCNHPKLVLTPQHPEYQKIMTL 1492 Query: 52 ------------HDEKIKALEVIIEKA--------------NAAPIIVAYHFNSDLARL- 84 H K+ AL+ ++ N ++ S L + Sbjct: 1493 LNQQGTSMDDIQHACKLPALKQLLLDCGIGNAAVANDVVYINQHRALIFCQLKSMLDIIE 1552 Query: 85 ------------QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 + + ++N + I +L G GLNL G + Sbjct: 1553 SDLLKKHLPNVSYLRLDGSIPPSQRHSVVNKFNSDPSIDVLLLTTQVGGLGLNLT-GADT 1611 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F W+ M + + R + G K+ V VY LI + T++E ++ + K Sbjct: 1612 VIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMGLQKFKLLTA 1666 Query: 192 DLLLNA 197 + +++ Sbjct: 1667 NTIISD 1672 >gi|47210118|emb|CAF91684.1| unnamed protein product [Tetraodon nigroviridis] Length = 1996 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 79/267 (29%), Gaps = 71/267 (26%) Query: 1 MKQYHKFQRELYCDLQGENIEAF------------------NSASKTVKCLQLANGAVYY 42 ++ Y F + E+I + + +L N Sbjct: 1646 VQLYEDFAKSRAKASVDESISSASTGEEEEEEEKPKLKATGHVFQALQYLRKLCNHPSLV 1705 Query: 43 DEEKHWKE-----------------VHDEKIKALEVIIEKAN----------------AA 69 +H + H K+ AL+ ++ Sbjct: 1706 LTSQHPEYRRITEELAAQSSSLRDVQHAPKLSALKQLLLDCGLGGGGGPEGATEAVVAQH 1765 Query: 70 PIIVAYHFNSDLARLQK----AFPQGRTLDK---------DPCTIQEWN-EGKIPLLFAH 115 +++ S L ++ T + + +N + I +L Sbjct: 1766 RVLIFCQLKSMLDIVEHDLLKPKLPSVTYLRLDGSVPAGLRHSIVSRFNNDPSIDVLLLT 1825 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G GLNL G + +VF W+ + + R + G KR V VY LI + T Sbjct: 1826 THVGGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYRLITRGT 1879 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKET 202 ++E ++ + K +I + +++ Sbjct: 1880 LEEKIMGLQKFKMSIANTVISQDNASM 1906 >gi|328868264|gb|EGG16642.1| chromo domain-containing protein [Dictyostelium fasciculatum] Length = 2319 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 69/229 (30%), Gaps = 39/229 (17%) Query: 4 YHKFQRELYCDLQGENIEAFN--SASKTV-KCLQLANGAVYYDEEKHWKEV--------- 51 Y + L N + + + ++ N + Sbjct: 834 YRAILEKNREFLARGVKSKSNLPKLTNIMIQIRKVCNHPFLIPGAEDTIIRQEKLTTDEQ 893 Query: 52 -------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 K+ ++ +++ K +++ L L+ + Sbjct: 894 IAELLIRSSSKLVLVDKLLQRLKKEGHRVLIFSQMVESLNILEDYLHYREYSYERLDGSV 953 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +I+ + + + + S G G+NL + ++ F W+ + + Sbjct: 954 SSVLRQASIERFMDQESDRFVFLLSTRSGGVGINLTS-ADTVILFDSDWNPQS-----DL 1007 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G V VY LI +NT ++ + + K + ++LN K Sbjct: 1008 QAQARCHRIGQTSNVKVYRLITRNTYEQYLFEVATKKLLLDHIVLNNAK 1056 >gi|331232855|ref|XP_003329089.1| helicase SWR1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309308079|gb|EFP84670.1| helicase SWR1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 2115 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 23/201 (11%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 L + + A K + Q+ G + H E + Sbjct: 1843 ISKLGPKGLRDITHAPKLLALRQILRDCG-IGLTTSTHLIETVADDGGGTTASGGTIPQH 1901 Query: 70 PIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAH 115 +++ L K +Q +N + I L Sbjct: 1902 RVLIFCQMKQMLDIIEHDLFKLQMPNVTYMRMDGSTDATKRHDVVQTFNSDPSIDCLLLT 1961 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G GLNL G + ++F W+ M + + R + G K+ V VY LI + T Sbjct: 1962 THVGGLGLNLT-GADTVIFVEHDWNP-----MKDLQAMDRAHRLGQKKVVNVYRLITRAT 2015 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 ++E ++ R K I ++N Sbjct: 2016 LEEKIMGLQRFKMNIATSIVN 2036 >gi|5917755|gb|AAD56023.1|AF181826_1 chromodomain helicase DNA binding protein 1 [Gallus gallus] Length = 981 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + Sbjct: 408 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQH 467 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 468 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 527 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 528 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 581 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 582 RAHRIGPKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 625 >gi|330846201|ref|XP_003294935.1| hypothetical protein DICPUDRAFT_85378 [Dictyostelium purpureum] gi|325074496|gb|EGC28539.1| hypothetical protein DICPUDRAFT_85378 [Dictyostelium purpureum] Length = 2294 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 66/171 (38%), Gaps = 11/171 (6%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 + +Q G + + + K +I + + F + Sbjct: 1190 KRLVQYDCGKLQ----EMAILLRKLKNGGHRALIFTQMTRMLDIFEEFLNIHGYTYLRLD 1245 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++K + +N + KI L S G GLNL G + ++F+ W+ + Sbjct: 1246 GSTKIEKRQALTERFNTDPKIFLFILSTRSGGLGLNLT-GADTVIFYDTDWNPS-----M 1299 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G R V +Y LI ++I+E +L++ K + ++++ A + Sbjct: 1300 DAQAQDRCHRIGQTREVNIYRLITMHSIEENILKKSNQKRQLDNMVIKAGE 1350 >gi|189233881|ref|XP_970343.2| PREDICTED: similar to Chromodomain-helicase-DNA-binding protein [Tribolium castaneum] gi|270014822|gb|EFA11270.1| hypothetical protein TcasGA2_TC010805 [Tribolium castaneum] Length = 1697 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 73/222 (32%), Gaps = 38/222 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY----DEEKHWKEVH----- 52 K Y+ ++ G + ++ + N A+ E + +E H Sbjct: 678 KNYNALRK-------GVKGSTNTFLNIVIELKKCCNHALLTKPTEYESNNSQEDHLQLLL 730 Query: 53 --DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 K+ L+ ++ + +++ L L + + Sbjct: 731 RGSGKLVLLDKLLIRLRETGHRVLIFSQMVRMLDILGEYLQLRHFPFQRLDGGIKGELRK 790 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL + ++ F W+ + + R Sbjct: 791 QALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQARA 844 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 845 HRIGQKNQVNIYRLVTARSVEEEIVERAKQKMVLDHLVIQRM 886 >gi|149611552|ref|XP_001521337.1| PREDICTED: similar to SMARCA4, partial [Ornithorhynchus anatinus] Length = 708 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 242 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 301 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 302 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 361 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 362 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 417 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 418 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 466 >gi|121700232|ref|XP_001268381.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus clavatus NRRL 1] gi|119396523|gb|EAW06955.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Aspergillus clavatus NRRL 1] Length = 1253 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 66/177 (37%), Gaps = 23/177 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLAR-----------LQ 85 Y V KI+ I+++ I+ F S L + Sbjct: 1067 KYLRRLEKTWVTSAKIEKTLEILQEIGNRDDSEKTIIFSQFTSLLDLLEVPIARRGWGYR 1126 Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + + D++ + + ++ + GLNL + ++ F +W+ Sbjct: 1127 RYDGSMKPADRNSAVLDFTDNADCKIMLVSLKAGNSGLNLVA-ASQVIIFDPFWNP---- 1181 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKK 200 IE + R + G +R V ++ ++ Q T+++ +L+ K + + L+ ALK+ Sbjct: 1182 -YIEEQAIDRAHRIGQRREVQIHRVLVQKTVEDRILELQDKKRELIEGALDEKALKQ 1237 Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 3/49 (6%), Positives = 9/49 (18%), Gaps = 6/49 (12%) Query: 3 QYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEE 45 Y+ + + N ++ Q + Sbjct: 828 LYNALESKTKLQFNKYLKANAVGRNYSNILVLLLRLRQACCHPHLMTDF 876 >gi|146174330|ref|XP_001019329.2| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|146144785|gb|EAR99084.2| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1016 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 75/216 (34%), Gaps = 23/216 (10%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWKEVH 52 +K Y D + N + ++ ++ + E + Sbjct: 299 LKMYRNILLNKTIDSVYIGDQKRNYNNTLMQLRKVCIHPYLFDGVEDRSLPEYGDHLVYN 358 Query: 53 DEKIKALEVIIEKANAAPI-----IVAYHFNSDL--ARLQKAFPQGRTLDKDPCTIQEWN 105 K+ L+ +++K ++ F + L A +++ + E+ Sbjct: 359 SGKMVVLDKLLKKLYQEKEKAHQVLIFTQFTTCLGKAWNYCRIDGSTEVNEREQMMNEFQ 418 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + G G+NL N +V F ++ + I+ + R + G R Sbjct: 419 RDDSDKFVFLLSTRAGGLGINLTK-ANFVVIFDSDFNPQ-----IDLQAMDRAYRIGQTR 472 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V V LI Q T++E +++R K + L++ + + Sbjct: 473 EVKVIRLITQFTVEEKIIERQGIKLKLDQLIIQSGR 508 >gi|308799669|ref|XP_003074615.1| Chromodomain-helicase-DNA-binding protein 6 (ISS) [Ostreococcus tauri] gi|116000786|emb|CAL50466.1| Chromodomain-helicase-DNA-binding protein 6 (ISS) [Ostreococcus tauri] Length = 1390 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 67/227 (29%), Gaps = 33/227 (14%) Query: 2 KQYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------- 51 K Y + L+ N A+ ++ + D + Sbjct: 556 KCYRALFERNFSFLRQGCESKENFANFANIMMEVRKCCQHPFLLDGVEAAVAPEGASTNI 615 Query: 52 ---HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK--------- 96 K++ L+ ++ +V L +G + + Sbjct: 616 LVSSSGKLQLLDKLLPHLREGGHRALVFSQMTRVLDVLEDYCRARGHSYVRLDGSVTGSA 675 Query: 97 DPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I + + L + G G+NL + ++ F W+ + + + Sbjct: 676 RQEAIDHYCAEDSDTFLFLLSTRAGGQGINL-VQADTVIMFDSDWNPQN-----DAQALA 729 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R V VY L+ + + ++ + R K ++ + KE Sbjct: 730 RAHRIGQTRQVQVYRLVMRGSYEKEMFTRASMKLGLEQAIFGGADKE 776 >gi|317159396|ref|XP_001827279.2| hypothetical protein AOR_1_1414024 [Aspergillus oryzae RIB40] Length = 1090 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 65/189 (34%), Gaps = 29/189 (15%) Query: 31 KCLQ--LANGAVY--YDEEKHWKEVHDEKIKALEVIIEKA--------NAAPIIVAYHFN 78 + Q L + A Y + + KI I+ +++ F Sbjct: 849 RLRQRALTSPAAKQKYHQILAETWISSSKIDRALEIVRDIVARGEPGGEREKVVIFSQFT 908 Query: 79 SDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 S L ++ + D+ T+ + +L + GLNL Sbjct: 909 SMLDLIEVPLARHGWAFRRYDGTMKPADRHAATVHFATDPDCLILLVSMKAGNSGLNLTA 968 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ +W+ +E V R + G +R V V+ ++ NT+++ +L K Sbjct: 969 -ASQVIILDPFWNP-----YVEDQAVGRVHRIGQRRPVHVHRILVSNTVEDRILDFQDRK 1022 Query: 188 STIQDLLLN 196 + + +++ Sbjct: 1023 RQLIEGIVD 1031 Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 2/50 (4%), Positives = 8/50 (16%), Gaps = 6/50 (12%) Query: 2 KQYHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEE 45 + Y + + + + Q + Sbjct: 621 ELYTALECHTRLQFNHYLSGGNPSRNVSHMLGLLQRLRQACCHPFLVSDF 670 >gi|297271008|ref|XP_002800208.1| PREDICTED: probable global transcription activator SNF2L2-like [Macaca mulatta] Length = 1173 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 578 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 637 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 638 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 697 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 698 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 753 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 754 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 802 >gi|83776027|dbj|BAE66146.1| unnamed protein product [Aspergillus oryzae] Length = 966 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 65/189 (34%), Gaps = 29/189 (15%) Query: 31 KCLQ--LANGAVY--YDEEKHWKEVHDEKIKALEVIIEKA--------NAAPIIVAYHFN 78 + Q L + A Y + + KI I+ +++ F Sbjct: 762 RLRQRALTSPAAKQKYHQILAETWISSSKIDRALEIVRDIVARGEPGGEREKVVIFSQFT 821 Query: 79 SDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 S L ++ + D+ T+ + +L + GLNL Sbjct: 822 SMLDLIEVPLARHGWAFRRYDGTMKPADRHAATVHFATDPDCLILLVSMKAGNSGLNLTA 881 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ +W+ +E V R + G +R V V+ ++ NT+++ +L K Sbjct: 882 -ASQVIILDPFWNP-----YVEDQAVGRVHRIGQRRPVHVHRILVSNTVEDRILDFQDRK 935 Query: 188 STIQDLLLN 196 + + +++ Sbjct: 936 RQLIEGIVD 944 Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 2/50 (4%), Positives = 8/50 (16%), Gaps = 6/50 (12%) Query: 2 KQYHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEE 45 + Y + + + + Q + Sbjct: 534 ELYTALECHTRLQFNHYLSGGNPSRNVSHMLGLLQRLRQACCHPFLVSDF 583 >gi|328769067|gb|EGF79112.1| hypothetical protein BATDEDRAFT_17244 [Batrachochytrium dendrobatidis JAM81] Length = 988 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 80/226 (35%), Gaps = 41/226 (18%) Query: 7 FQRELYCDLQGENIEAFNSAS-----------KTVKCLQLANGAVYY--------DEEKH 47 QR Y L ++I+A N A+ ++ + N + Sbjct: 367 MQRMWYKRLLEKDIDAVNGAAGRKESKTRLQNIVMQLRKCCNHPYLFDGAEPGPPYTTDQ 426 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 + K+ L+ +++ A + +++ + L L+ + Sbjct: 427 HLVDNSGKMALLDKLLQHLKAQGSRVLLFSQMSRVLDILEDYCIWKEFDYCRLDGTTAHE 486 Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +I E+N+ + + G G+NL +I++ + W+ + + Sbjct: 487 DRINSIDEYNKPDSSKFIFLLTTRAGGLGINL-ATADIVIMYDNDWNPQV-------VTE 538 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ V ++ I +N I+E V+ R K + L++ + Sbjct: 539 DRAHRIGQKKQVVIFRFITENAIEEKVIDRATQKLRLDQLVIQQGR 584 >gi|327309026|ref|XP_003239204.1| SWI/SNF family DNA-dependent ATPase Ris1 [Trichophyton rubrum CBS 118892] gi|326459460|gb|EGD84913.1| SWI/SNF family DNA-dependent ATPase Ris1 [Trichophyton rubrum CBS 118892] Length = 1171 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------P 98 K+ I++ + I+ F S L ++ + + Sbjct: 997 SAKVDKTIEILQSLRDSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGSMKPADRND 1056 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + ++ + GLNL + ++ +W+ IE + R + Sbjct: 1057 SVLDFTDNPDCRIMLVSLKAGNSGLNLVA-ASQVIILDPFWNP-----YIEDQAIDRAHR 1110 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V V+ L+ +NT+++ ++ K I + L+ Sbjct: 1111 IGQLRPVMVHRLLIENTVEDRIIALQDKKRQIIEGALDE 1149 >gi|194389378|dbj|BAG61650.1| unnamed protein product [Homo sapiens] Length = 867 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 227 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 286 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 287 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 346 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 347 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 402 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 403 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 451 >gi|118343653|ref|NP_001071647.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] gi|28975395|gb|AAO61783.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] Length = 1806 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 25/220 (11%), Positives = 66/220 (30%), Gaps = 38/220 (17%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE--------- 54 Y + G + ++ + N + + + Sbjct: 735 YKALSK-------GSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRS 787 Query: 55 ----KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 + +I + +++ L L + + + Sbjct: 788 SGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQA 847 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + G G+NL + +V F W+ + + R + Sbjct: 848 LDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQARAHR 901 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 902 IGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 941 >gi|73952006|ref|XP_546008.2| PREDICTED: similar to chromodomain helicase DNA binding protein 1 isoform 1 [Canis familiaris] Length = 1799 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 722 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 781 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 782 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 841 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 842 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 895 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 896 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 939 >gi|299751215|ref|XP_001830131.2| Fun30p [Coprinopsis cinerea okayama7#130] gi|298409272|gb|EAU91796.2| Fun30p [Coprinopsis cinerea okayama7#130] Length = 1123 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 19/168 (11%) Query: 47 HWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 ++ K+ L +I + +++ F L LQ + Sbjct: 926 DDVYLNAGKVTTLLKLIEGYRKEDRKMLIFSQFTQILDILQVILKNKGIKFLVLTGSTPV 985 Query: 95 DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D + E+ + IP+ + G G+NL +++V F ++ ++ Sbjct: 986 DVRQSLVDEFTEDEDIPIFLLSTKAGGMGINLTA-ASVVVMFDQDFNP-----HNDKQAQ 1039 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G KR V V LI++ TI+E +L+ TK + + + + + Sbjct: 1040 DRAYRIGQKRDVDVVKLISRGTIEEDMLKLGETKLALDEAVAGDTEGK 1087 >gi|242023503|ref|XP_002432172.1| Homeotic gene regulator, putative [Pediculus humanus corporis] gi|212517560|gb|EEB19434.1| Homeotic gene regulator, putative [Pediculus humanus corporis] Length = 1504 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + + H Sbjct: 925 LYRHMQSKGVLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQQIEEKYCDHVGAA 984 Query: 53 ------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 K + L+ I+ K +++ + ++ Sbjct: 985 AGVISGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLTWRNFNYLRL 1044 Query: 96 -------KDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++++N + + L + G GLNLQ + ++ F W+ + Sbjct: 1045 DGTTKSEDRGELLRKFNSKDSEYFLFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ--- 1100 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1101 --DLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1149 >gi|41055574|ref|NP_957438.1| DNA repair and recombination protein RAD54-like [Danio rerio] gi|28277973|gb|AAH46050.1| RAD54-like (S. cerevisiae) [Danio rerio] Length = 738 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 42/201 (20%) Query: 33 LQLANGAVYYDEE---------------------KHWKEVHDEKIKALEVIIEKA---NA 68 +L N E+ K + K+ L+ I+ + Sbjct: 448 KKLCNHPALIYEKCLTGEEGFDGALDLFPQNYSTKAVEPQLSGKMLVLDYILAMTRTTTS 507 Query: 69 APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFAHP 116 +++ ++ L +K ++ K ++ +N P + Sbjct: 508 DKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSS 567 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL G N LV F W+ + + R + G K+ ++Y L++ TI Sbjct: 568 KAGGCGLNL-IGANRLVMFDPDWNPAN-----DEQAMARVWRDGQKKTCYIYRLLSTGTI 621 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +LQR K + +++ Sbjct: 622 EEKILQRQAHKKALSSCVVDE 642 >gi|206599758|ref|YP_002241947.1| gp54 [Mycobacterium phage Gumball] gi|206282972|gb|ACI06426.1| gp52 [Mycobacterium phage Gumball] Length = 647 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 26/228 (11%), Positives = 67/228 (29%), Gaps = 33/228 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-----VYYDEEKHWKEVHDEK 55 +K Y ++ L+ + A ++ + Q+A E+ + K Sbjct: 412 LKAYQAMVKDAAVKLESGVLSANGVLAEMTRLKQMACSYGDLAIAPTGEQTFRPSLPSNK 471 Query: 56 IKALEVIIEKA--------NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKD 97 L ++ +IVA F L + + Sbjct: 472 FDYLVDLLSDRGIGSGEFDPTGKVIVASQFTKLLNLFYAELNKLGIKCHLLTGATSEKER 531 Query: 98 PCTIQEWNEGKI-----PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + KI + + + G + L + +V W+ ++ +Q+ +R Sbjct: 532 VRMADAFQNTKIGDDTPHVFLLNTIAGGASITL-DAADDVVTLDETWNKDDQEQVEDRAH 590 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V ++ L + +I+E + + +++ + Sbjct: 591 RISRT----DHTVTIHNLRSLGSIEERIATSAFAQERNIKSIIDGARG 634 >gi|71425488|ref|XP_813116.1| helicase [Trypanosoma cruzi strain CL Brener] gi|70877970|gb|EAN91265.1| helicase, putative [Trypanosoma cruzi] Length = 1191 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 58/142 (40%), Gaps = 17/142 (11%) Query: 65 KANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLF 113 + +++ F L ++ + +N + +I + Sbjct: 826 RREGHRMLIFTQFVHMLNILERFLAIIGIPYLRIDGSTQAERRQAFVDRFNEDDRITCMI 885 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 S G GLNL G + ++F+ W+ ++ R + G + V +Y LI++ Sbjct: 886 LSTRSGGIGLNLT-GADTVIFYDSDWNPT-----MDLQAQDRCHRIGQTKPVTIYRLISE 939 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 +T++E +LQ+ R + + ++++ Sbjct: 940 HTVEENILQKARERKKLNNVVI 961 >gi|190345830|gb|EDK37782.2| hypothetical protein PGUG_01880 [Meyerozyma guilliermondii ATCC 6260] Length = 952 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 61/164 (37%), Gaps = 21/164 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK------------DPCT 100 K+ L+ ++ V +F + Sbjct: 734 SGKLARLDQLLVDLKGDDHRVLIYFQMTKMMDLMEEYLTYRQHRYIRLDGSSKLEDRRDL 793 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 794 VHDWQTKPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 847 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKKE 201 G + V VY L+A+ TI+E + R + K +Q +++ A KKE Sbjct: 848 GQTKQVTVYRLLARGTIEERMRNRAKQKEQVQQVVMEGKASKKE 891 >gi|73997414|ref|XP_867801.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 9 [Canis familiaris] Length = 1899 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 25/221 (11%), Positives = 62/221 (28%), Gaps = 33/221 (14%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 972 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1031 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1032 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1091 Query: 96 KDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + + G G+NL + ++ + W+ + + Sbjct: 1092 MRQEAIDRFNGREPDFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAFS 1145 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1146 RAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1186 >gi|296080908|emb|CBI18752.3| unnamed protein product [Vitis vinifera] Length = 1187 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 60/175 (34%), Gaps = 23/175 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN------AAPIIVAYHFNSDLARLQKAFPQGRTLD 95 +D + KI+A +++ + IV + L L+ Sbjct: 1000 HDPCPESRLYDSSKIRAALEVLQSLSKPRDLVGEKAIVFSQWTRMLDLLESCLKNSSIQY 1059 Query: 96 KD----------PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + ++++N ++ ++ + GLN+ + ++ LWW+ Sbjct: 1060 RRLDGTMSVVARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACH-VLLLDLWWNPTT- 1117 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E + R + G R V V L ++T+++ +L + K + + Sbjct: 1118 ----EDQAIDRAHRIGQTRPVTVLRLTVKDTVEDRILALQQKKREMVASAFGEDE 1168 >gi|1597721|emb|CAA67494.1| putative helicase [Schizosaccharomyces pombe] Length = 1367 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 81/226 (35%), Gaps = 37/226 (16%) Query: 2 KQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYD---------------E 44 + Y + Y L G + + V+ +++N + + Sbjct: 629 EWYKNILTKNYRALTGHTDGRGQLSLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTRED 688 Query: 45 EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 ++ K+ L+ +++ K + +++ L L + + Sbjct: 689 TLRGIIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTI 748 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +I +N P + + G G+NL + ++ F W+ + + Sbjct: 749 PASVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINL-NTADTVIIFDSDWNPQA-----DL 802 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 803 QAMARAHRIGQKNHVNVYRFLSKDTVEEDILERARRKMILEYAIIS 848 >gi|45201219|ref|NP_986789.1| AGR123Cp [Ashbya gossypii ATCC 10895] gi|44986073|gb|AAS54613.1| AGR123Cp [Ashbya gossypii ATCC 10895] Length = 1422 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 73/222 (32%), Gaps = 38/222 (17%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------------- 50 + G F+ + + + +N + ++ Sbjct: 610 LTKNYNALTAGTKGTHFSLLNIMNELKKASNHPYLFGNAENRVLAKFGDGNRSRENILRG 669 Query: 51 --VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 + K+ L+ ++ K + +++ L L + Sbjct: 670 LIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSSQ 729 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +I +N + + G G+NL + ++ F W+ + + + Sbjct: 730 RRISIDHFNAPDSNDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQAMA 783 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K V VY ++++T++E VL+R R K ++ +++ Sbjct: 784 RAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 825 >gi|301105731|ref|XP_002901949.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262099287|gb|EEY57339.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 744 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 25/224 (11%), Positives = 74/224 (33%), Gaps = 38/224 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------KHWKEVHDEK 55 + + + +K ++ + +DE K Sbjct: 433 KAMEEKYGKFQAQKAFNTTTLRNKMMQLRKCCLHPYLFDEPLTAGGDVVTDERMIETSGK 492 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + L+ ++ + +++ + L+ F L +++ Sbjct: 493 LSILDRMLRQLKRKGHKVLIFSQMTRMMDILEDYFRMREYSYCRLDGSTKLMDRVDQMEK 552 Query: 104 WN-----------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +N + + + + G G+NL + ++F+ W+ ++ + Sbjct: 553 FNKVSAGSGSANDDDNVFVFMLSTRAGGLGINL-IAADTVIFYDSDWNPQQ-----DNQA 606 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K + VY L+ +N+ ++ + QR K ++ +++ Sbjct: 607 MDRCHRIGQKNEIIVYRLVTENSFEDRMTQRAFEKRKLERVVIQ 650 >gi|302499754|ref|XP_003011872.1| hypothetical protein ARB_01851 [Arthroderma benhamiae CBS 112371] gi|291175426|gb|EFE31232.1| hypothetical protein ARB_01851 [Arthroderma benhamiae CBS 112371] Length = 921 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 67/216 (31%), Gaps = 46/216 (21%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEV------------------------HDEKI 56 + ++ ++ N + KI Sbjct: 533 NSESALQLITILKKVCNSPSLLKPKVEDNGKGEDTSMSALLSSLPPNIHRCLAAGSSGKI 592 Query: 57 KALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + L+ ++ +++ ++ S L L K +++ Sbjct: 593 RVLDQLLYNLQSKTKEKVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVED 652 Query: 104 WN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNL G + LV F + W+ + + R + G Sbjct: 653 FNRSPSSSCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DIQAMARIHRDG 706 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR +Y L+ + I+E + QR TK + D +++ Sbjct: 707 QKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMD 742 >gi|261200100|ref|XP_002626451.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis SLH14081] gi|239594659|gb|EEQ77240.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis SLH14081] Length = 1150 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 19/199 (9%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + ++E L + + + + D++ + + L +++ Sbjct: 952 EAKKEYIRYLNDNWVTSAKIEKTMETLRSIQSRIPEGDDQPEKTIIFSQ-FTTLLDLLQV 1010 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLN 124 + + + E+++ K ++ + GLN Sbjct: 1011 PIEREGWGYCRY-----------DGSMQPSERNEAVLEFSDSKDRTIMLISLKAGNSGLN 1059 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++ +W+ IE + R + G R V V+ + + T+++ +L+ Sbjct: 1060 LT-VASQVIILDPFWNP-----YIEEQAIDRAHRIGQLRPVMVHRIFVKGTVEDRILELQ 1113 Query: 185 RTKSTIQDLLLNALKKETI 203 K + + L+ +TI Sbjct: 1114 DRKRALVEGALDEKASQTI 1132 Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 16/65 (24%), Gaps = 6/65 (9%) Query: 3 QYHKFQRELYC----DLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + L+ I N ++ Q D+ KI Sbjct: 748 LYDALESKTQVRFNKYLREGTIGRNYSNILVLLLRLRQTCCHPHLIDDLSVETIAEAAKI 807 Query: 57 KALEV 61 +E Sbjct: 808 DLIEN 812 >gi|224015246|ref|XP_002297281.1| helicase-like protein [Thalassiosira pseudonana CCMP1335] gi|220968075|gb|EED86431.1| helicase-like protein [Thalassiosira pseudonana CCMP1335] Length = 592 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 55/158 (34%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCT 100 K L ++ + I++ + L + +++ Sbjct: 394 SPKFVRLRTLLPELVGKGHRILLFSQWTRVLDLMHNLLESLDMKFMRLDGSTAVNERQEM 453 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I + + IP+ + G GLNL ++ + L ++ +R R + Sbjct: 454 IDTFTEDSSIPIFLLSTRAGGMGLNLTA-ADVCILHDLDFNP-----FNDRQAEDRCHRI 507 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ V + ++ + T+DE + K + + +++ Sbjct: 508 GQKKPVTILKMVTRGTVDEAIYSLQERKERMNEAIMDE 545 >gi|156089179|ref|XP_001611996.1| DNA repair protein rhp16 [Babesia bovis T2Bo] gi|154799250|gb|EDO08428.1| DNA repair protein rhp16, putative [Babesia bovis] Length = 1289 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 21/146 (14%) Query: 70 PIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IV + S L + + + ++ + ++ + Sbjct: 1138 KSIVFSQYCSMLDLIAYRLKTANIECAVLVGNTKIESRRNILLEFNKNPSLRVMLISLNA 1197 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNLQ N + WW+ + R + G + V+ I ++TI+E Sbjct: 1198 GGEGLNLQ-IANRIFLMDPWWNPAAEL-----QAIQRAHRIGQTKPVYAIRFICKDTIEE 1251 Query: 179 LVLQRLRTKSTIQDLLL----NALKK 200 ++ K + D + ++KK Sbjct: 1252 RIIALQEKKMILFDATICSSGESMKK 1277 >gi|317030844|ref|XP_001392337.2| chromodomain helicase (Chd1) [Aspergillus niger CBS 513.88] Length = 1516 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y + Y L + + + ++ + +N + + Sbjct: 691 LEYYKNILTKNYAALNDGARGQKQSLLNIMMELKKASNHPFMFPNAEARILEGSTRREDV 750 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ-KAFPQGRTLDK------ 96 K+ L+ ++ K + +++ L L +G T + Sbjct: 751 LRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMEFRGYTYQRLDGTIP 810 Query: 97 ---DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + +V F W+ + + Sbjct: 811 AAARRLAIEHYNAPGSNDFAFILSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 864 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E V++R R K + Sbjct: 865 AMARAHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLL 903 >gi|109522620|ref|YP_655432.1| gp53 [Mycobacterium phage PLot] gi|88910727|gb|ABD58652.1| gp53 [Mycobacterium phage PLot] Length = 647 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 26/228 (11%), Positives = 67/228 (29%), Gaps = 33/228 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-----VYYDEEKHWKEVHDEK 55 +K Y ++ L+ + A ++ + Q+A E+ + K Sbjct: 412 LKAYQAMVKDAAVKLESGVLSANGVLAEMTRLKQMACSYGDLAIAPTGEQTFRPSLPSNK 471 Query: 56 IKALEVIIEKA--------NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKD 97 L ++ +IVA F L + + Sbjct: 472 FDYLVDLLSDRGIGSGEFDPTGKVIVASQFTKLLNLFYAELNKLGIKCHLLTGAISEKER 531 Query: 98 PCTIQEWNEGKI-----PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + KI + + + G + L + +V W+ ++ +Q+ +R Sbjct: 532 VRMADAFQNTKIGDDTPHVFLLNTIAGGASITL-DAADDVVTLDETWNKDDQEQVEDRAH 590 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V ++ L + +I+E + + +++ + Sbjct: 591 RISRT----DHTVTIHNLRSLGSIEERIATSAFAQERNIKSIIDGARG 634 >gi|242772478|ref|XP_002478043.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Talaromyces stipitatus ATCC 10500] gi|218721662|gb|EED21080.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Talaromyces stipitatus ATCC 10500] Length = 1146 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 63/173 (36%), Gaps = 21/173 (12%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA----NAAPIIVAYHFNSDLAR-----------L 84 Y + + KI+ I+E+ + I+ F S L Sbjct: 959 RKYFKRLEKNWMTSAKIEKAIEILEEIKDSGSGEKTIIFSQFTSLLDLLEVPINRRGWKY 1018 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ D++ ++ + + ++ + GLNL + ++ F +W+ Sbjct: 1019 RRYDGSMNPRDRNESVLEFTDNPECDIMLVSLKAGNAGLNLVA-ASQVIIFDPFWNP--- 1074 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 IE + R + G R V V+ ++ + T+++ +L K + + L+ Sbjct: 1075 --YIEEQAIDRAHRLGQTRPVQVHRVLVEKTVEDRILALQEEKREVIEGALDE 1125 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 4/49 (8%), Positives = 12/49 (24%), Gaps = 6/49 (12%) Query: 2 KQYHKFQRELYCD----LQGENI--EAFNSASKTVKCLQLANGAVYYDE 44 + Y+ + L + N ++ Q ++ Sbjct: 695 QLYNSLESRTQIQFNKYLDAGTVGRNYSNILVLLLRLRQACCHPHLIND 743 >gi|154296983|ref|XP_001548920.1| hypothetical protein BC1G_12580 [Botryotinia fuckeliana B05.10] gi|150843107|gb|EDN18300.1| hypothetical protein BC1G_12580 [Botryotinia fuckeliana B05.10] Length = 817 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 67/207 (32%), Gaps = 29/207 (14%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYD---------EEKHWKEVHDEKIKALEVI 62 +L + I + + ++ + N + + K+ L+ + Sbjct: 528 ILELARKEISSKKLGNPVMQMRLVCNSPLNFYNPWSADSGIPFNETLVSSSGKMLLLDRL 587 Query: 63 IEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT--LDKDPCTIQEWNEGK 108 + +++ F +L + G + + + + Sbjct: 588 LPSLFSRGHKVLIFSQFKTQLDILEDYARELRNWKVCRIDGSVAQDFRRQQIKEFNEDPE 647 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L + G G+NL + ++ F W+ ++ + R + G + V V+ Sbjct: 648 FKLFLLSTRAGGQGINL-ASADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTKPVVVF 701 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 L + T++E +L K ++ L++ Sbjct: 702 RLATKGTVEEDLLMSADAKRRLEKLVI 728 >gi|47575794|ref|NP_001001241.1| RAD54-like [Xenopus (Silurana) tropicalis] gi|45708870|gb|AAH67986.1| RAD54-like (S. cerevisiae) [Xenopus (Silurana) tropicalis] Length = 742 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 81/233 (34%), Gaps = 43/233 (18%) Query: 2 KQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y F ++ + E + +S S +L N E+ +E Sbjct: 420 ELYKLFLKQAKPAEDLNEGKISVSSLSSITSLKKLCNHPSLIYEKCVEEEEGFQGALNLF 479 Query: 53 -------------DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ------ 90 K+ L+ I+ ++ +++ ++ L +K Sbjct: 480 PSGYSTKSVEPQLSGKMLVLDYILAVTRSTSSDKVVLVSNYTQTLDLFEKLCRTRRYLYV 539 Query: 91 ----GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ K ++ +N P + + G GLNL G N LV F W+ Sbjct: 540 RLDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN- 597 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ F+Y L++ TI+E + QR K + +++ Sbjct: 598 ----DEQAMARVWRDGQKKTCFIYRLLSTGTIEEKIFQRQTHKKALSSCVVDE 646 >gi|322703872|gb|EFY95474.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Metarhizium anisopliae ARSEF 23] Length = 1074 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 67/189 (35%), Gaps = 23/189 (12%) Query: 28 KTVKCLQLANGAVY--YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 K+++ N Y Y + K+ ++ + I+ + L Sbjct: 873 KSLRLEAAKNHQAYKRYMAYLRKTWMPAAKVTECMKLLREIRETGEKTIIFSQWTLLLDL 932 Query: 84 LQKAFPQ------------GRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGN 130 L+ A T D+ +++ + + ++ + GLNL + Sbjct: 933 LEVAMWHEQFPDKPVRYDGSMTGDERSNAAKDFRDRSECNVMLVSLRAGNAGLNLTA-AS 991 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ +W+ IE + R + G ++ V VY ++ Q T+++ ++ K I Sbjct: 992 RVIIMDPFWNP-----YIEMQAIDRTYRIGQQKEVEVYRILTQETVEDRIVALQNKKKEI 1046 Query: 191 QDLLLNALK 199 + L+ + Sbjct: 1047 VEAALDETE 1055 Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats. Identities = 4/57 (7%), Positives = 13/57 (22%), Gaps = 6/57 (10%) Query: 4 YHKFQRELYC----DLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 Y + + + L+ ++ N ++ Q + Sbjct: 618 YKQLEEKAQVVFSKYLREGSVGKNYSNILVLLLRLRQACCHPHLNLDVDDAVNPVSS 674 >gi|225680579|gb|EEH18863.1| helicase swr1 [Paracoccidioides brasiliensis Pb03] Length = 1679 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1338 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQSGGHRALIFTQMTK 1381 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1382 MLDILEQFLNIHGHRYLRLDGATKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-G 1440 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1441 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1495 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1496 MLDDVIIQEGE 1506 >gi|255725912|ref|XP_002547882.1| hypothetical protein CTRG_02179 [Candida tropicalis MYA-3404] gi|240133806|gb|EER33361.1| hypothetical protein CTRG_02179 [Candida tropicalis MYA-3404] Length = 818 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 71/193 (36%), Gaps = 31/193 (16%) Query: 28 KTVKCLQLANGAVYYDEE------------KHWKEVHDEKIKALEVIIEK--ANAAPIIV 73 K ++ + N Y E + + K + L+ ++ K N +++ Sbjct: 549 KVIQLRNICNSPYMYYEPFADDSDESTDKFMEVLKKNSCKFQMLDQLLSKLLPNGHKLLI 608 Query: 74 AYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 F + L+ F + N+ + + + G G Sbjct: 609 FCQFTKVMELLESYFDYFEIKTCYLDGTVSHDIRQEQIDDFNNDPESKIFLLSTRAGGLG 668 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + ++ + W+ + ++ + R + G + V +Y + +++I+E++L Sbjct: 669 LNLTA-ADTVILWDSDWNPQ-----VDLQAIDRVHRIGQTKPVKIYRFMVKDSIEEILLS 722 Query: 183 RLRTKSTIQDLLL 195 R +K ++ L++ Sbjct: 723 RSGSKRMLEKLVM 735 >gi|109522826|ref|YP_655246.1| gp50 [Mycobacterium phage PBI1] gi|189043204|ref|YP_001936143.1| gp52 [Mycobacterium phage Adjutor] gi|206599671|ref|YP_002241550.1| gp52 [Mycobacterium phage Butterscotch] gi|206599847|ref|YP_002241467.1| gp53 [Mycobacterium phage Troll4] gi|88910539|gb|ABD58466.1| gp50 [Mycobacterium phage PBI1] gi|188090855|gb|ACD49637.1| gp52 [Mycobacterium phage Adjutor] gi|206282853|gb|ACI06340.1| gp52 [Mycobacterium phage Butterscotch] gi|206283089|gb|ACI06514.1| gp53 [Mycobacterium phage Troll4] Length = 647 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 26/228 (11%), Positives = 67/228 (29%), Gaps = 33/228 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-----VYYDEEKHWKEVHDEK 55 +K Y ++ L+ + A ++ + Q+A E+ + K Sbjct: 412 LKAYQAMVKDAAVKLESGILSANGVLAEMTRLKQMACSYGDLAIAPTGEQTFRPSLPSNK 471 Query: 56 IKALEVIIEKA--------NAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKD 97 L ++ +IVA F L + + Sbjct: 472 FDYLVDLLSDRGIGSGEFDPTGKVIVASQFTKLLNLFYTELNKLGIRCHLLTGATSEKER 531 Query: 98 PCTIQEWNEGKI-----PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + KI + + + G + L + +V W+ ++ +Q+ +R Sbjct: 532 VRMADAFQNTKIGDDTPHVFLLNTIAGGASITL-DAADDVVTLDETWNKDDQEQVEDRAH 590 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V ++ L + +I+E + + +++ + Sbjct: 591 RISRT----DHTVTIHNLRSLGSIEERIATSAFAQERNIKSIIDGARG 634 >gi|115534248|ref|NP_499654.3| yeast Swi2/Snf2-Like family member (ssl-1) [Caenorhabditis elegans] gi|122064843|sp|Q9NEL2|SSL1_CAEEL RecName: Full=Helicase ssl-1; AltName: Full=Swi/snf2-like protein 1 gi|45451721|gb|AAS65429.1| Swi/Snf family ATPase [Caenorhabditis elegans] gi|95101929|emb|CAC35851.3| C. elegans protein Y111B2A.22a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 2395 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 7/122 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F S +++ ++ +N + K+ S G G+NL G + ++F+ Sbjct: 1223 FLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGGVGVNLT-GADTVIFY 1281 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ ++ R + G R V +Y LI++ TI+E +L++ K + +L + Sbjct: 1282 DSDWNPT-----MDAQAQDRCHRIGQTRNVSIYRLISERTIEENILRKATQKRRLGELAI 1336 Query: 196 NA 197 + Sbjct: 1337 DE 1338 >gi|239608047|gb|EEQ85034.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis ER-3] Length = 1150 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 19/199 (9%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + ++E L + + + + D++ + + L +++ Sbjct: 952 EAKKEYIRYLNDNWVTSAKIEKTMETLRSIQSRIPEGDDQPEKTIIFSQ-FTTLLDLLQV 1010 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLN 124 + + + E+++ K ++ + GLN Sbjct: 1011 PIEREGWGYCRY-----------DGSMQPSERNEAVLEFSDSKDRTIMLISLKAGNSGLN 1059 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++ +W+ IE + R + G R V V+ + + T+++ +L+ Sbjct: 1060 LT-VASQVIILDPFWNP-----YIEEQAIDRAHRIGQLRPVMVHRIFVKGTVEDRILELQ 1113 Query: 185 RTKSTIQDLLLNALKKETI 203 K + + L+ +TI Sbjct: 1114 DRKRALVEGALDEKASQTI 1132 Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 16/65 (24%), Gaps = 6/65 (9%) Query: 3 QYHKFQRELYC----DLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + L+ I N ++ Q D+ KI Sbjct: 748 LYDALESKTQVRFNKYLREGTIGRNYSNILVLLLRLRQTCCHPHLIDDLSVETIAEAAKI 807 Query: 57 KALEV 61 +E Sbjct: 808 DLIEN 812 >gi|239611425|gb|EEQ88412.1| helicase swr1 [Ajellomyces dermatitidis ER-3] Length = 1684 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1339 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQSGGHRALIFTQMTK 1382 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1383 MLDILEQFLNIHGHRYLRLDGATKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-G 1441 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1442 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1496 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1497 MLDDVIIQEGE 1507 >gi|327348564|gb|EGE77421.1| helicase swr1 [Ajellomyces dermatitidis ATCC 18188] Length = 1684 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1339 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQSGGHRALIFTQMTK 1382 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1383 MLDILEQFLNIHGHRYLRLDGATKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-G 1441 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1442 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1496 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1497 MLDDVIIQEGE 1507 >gi|261205240|ref|XP_002627357.1| helicase swr1 [Ajellomyces dermatitidis SLH14081] gi|239592416|gb|EEQ74997.1| helicase swr1 [Ajellomyces dermatitidis SLH14081] Length = 1684 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1339 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQSGGHRALIFTQMTK 1382 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1383 MLDILEQFLNIHGHRYLRLDGATKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-G 1441 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1442 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1496 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1497 MLDDVIIQEGE 1507 >gi|190345483|gb|EDK37379.2| hypothetical protein PGUG_01477 [Meyerozyma guilliermondii ATCC 6260] Length = 1895 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 7/120 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + ++++N + I +L G GLNL G + ++F Sbjct: 1700 KHLPSVTYMRLDGSTDPRDRQSIVRKFNEDPSIDVLLLTTKVGGLGLNLT-GADTVIFVE 1758 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY LI ++T++E ++ + K I ++N Sbjct: 1759 HDWNP-----MNDLQAMDRAHRLGQKKVVNVYRLITKHTLEEKIMGLQKFKMNIASTVVN 1813 >gi|154421756|ref|XP_001583891.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gi|121918135|gb|EAY22905.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] Length = 1924 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 27/219 (12%), Positives = 61/219 (27%), Gaps = 50/219 (22%) Query: 30 VKCLQLANGAVYYDEEKHWKEV-------------------------HDEKI--KALEVI 62 ++ ++ N + + + K+ + Sbjct: 790 MELRKVCNHPYLLNGAEEQILIERRDMSKIPANEPLPDGFVEESLIRSSGKMILLDKLLA 849 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEG--KIP 110 K + +++ L LQ + I +N+ I Sbjct: 850 KLKNDGHRVLIFSQMTRMLDILQDYLYNRGYEYERIDGTIRGDERQKAIDRYNKPNSPIF 909 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL + ++ + W+ + + R + G + V VY Sbjct: 910 VFLLCTHAGGLGINLTS-ADTVIIYDSDWNPQN-----DIQATARCHRIGQTKEVKVYRF 963 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA-----LKKETIH 204 I N+ + + R K + +L +K E I Sbjct: 964 ITANSYERKMFDRASYKLGLDHAVLEGTGKQQMKTEDIE 1002 >gi|295658318|ref|XP_002789720.1| helicase swr1 [Paracoccidioides brasiliensis Pb01] gi|226283023|gb|EEH38589.1| helicase swr1 [Paracoccidioides brasiliensis Pb01] Length = 1678 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1337 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQSGGHRALIFTQMTK 1380 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1381 MLDILEQFLNIHGHRYLRLDGATKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-G 1439 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1440 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1494 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1495 MLDDVIIQEGE 1505 >gi|255940126|ref|XP_002560832.1| Pc16g04810 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585455|emb|CAP93151.1| Pc16g04810 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1488 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 73/219 (33%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y + Y L + + ++ + +N + + Sbjct: 674 LEYYKNILTKNYAALNDGNKGMKQSLLNIMMELKKASNHPFMFPNAEAKILEGSARREDI 733 Query: 51 -----VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR-LQKAFPQGRTLDK------ 96 K+ L+ ++ K + +++ L + +G + Sbjct: 734 LRAMITSSGKMMLLDQLLRKLSVDGHRVLIFCQMVGMLNILSEYMEYRGYKYQRLDGTIP 793 Query: 97 ---DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + +V F W+ + + Sbjct: 794 SAARRLAIEHYNAPGSTDFAFLLSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 847 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++TI+E V++R R K + Sbjct: 848 AMARAHRIGQTRPVSVYRLVSKDTIEEEVIERARNKLLL 886 >gi|164427331|ref|XP_963868.2| hypothetical protein NCU03060 [Neurospora crassa OR74A] gi|157071698|gb|EAA34632.2| hypothetical protein NCU03060 [Neurospora crassa OR74A] Length = 1664 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 35/223 (15%) Query: 4 YHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------------ 50 Y Y L N + + ++ +++N + + Sbjct: 720 YKNILTRNYAALSDASNGHKQSLLNIMMELKKVSNHPYMFQGAEERVLNGSTRREDQIKG 779 Query: 51 --VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K + +++ L L + Sbjct: 780 LITSSGKMMLLDQLLAKLRKDGHRVLIFSQMVKMLDILGDYLRVRGYQFQRLDGTIPAGP 839 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + G G+NL + ++ + W+ + + + Sbjct: 840 RRMAINHFNAEGSDDFCFLLSTRAGGLGINLMT-ADTVIIYDSDWNPQA-----DLQAMA 893 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V VY L+A+ TI+E V++R R K ++ L + A Sbjct: 894 RAHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTIQA 936 >gi|56384753|gb|AAQ24521.2| Rad26 [Giardia intestinalis] Length = 925 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 27/200 (13%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYY---DEEKHWKEVHDEKIKALEVII---EKANAAP 70 GE I +K V+ + + + K+ L + + Sbjct: 497 GEGITKLT-MAKLVQLQHICDHPGLLSTAPFDDSELYESSCKLTYLMEQLTTLWSQSQDK 555 Query: 71 IIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHP 116 I+V L ++K +D P I ++ + +I L Sbjct: 556 ILVFCQGRMMLNIVEKALLETASFKNAYLRMDGNIPVDARPALISKFSTDPQIRLFLLTT 615 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GLNL N + + W+ I+ V R + + V VY + TI Sbjct: 616 RVGGLGLNLTA-ANHVFLLNPNWNPT-----IDDQSVERCWRITQTKKVIVYKVFTGGTI 669 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + R K + +L+ Sbjct: 670 EEKIFNRQIYKRLLVSRVLD 689 >gi|71020293|ref|XP_760377.1| hypothetical protein UM04230.1 [Ustilago maydis 521] gi|46100046|gb|EAK85279.1| hypothetical protein UM04230.1 [Ustilago maydis 521] Length = 2115 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 80/268 (29%), Gaps = 79/268 (29%) Query: 2 KQYHKFQRE-----------LYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHW 48 + Y F ++ L G+ E + +L N + + Sbjct: 1780 QLYDDFSKDQNEDEAEAFASSEASLAGKEPNSEKQHVFKALQYMRKLVNHPSLVLTDDNP 1839 Query: 49 KEV-----------------HDEKIKALEVIIEKA------------------------- 66 K V H K++AL ++ Sbjct: 1840 KHVAIKHKLNKSGGSLNDISHSPKLQALRQLLLDCGIGASGAAAAAGSGGVSDLNGDIGG 1899 Query: 67 ----NAAPIIVAYHFNSDLARL-------------QKAFPQGRTLDKDPCTIQEWN-EGK 108 + +++ + + + +K +Q +N + Sbjct: 1900 ESAVSQHRVLIFCQLKQMIDIIQRDLFAALMPSVSYMRLDGSVSAEKRHSIVQTFNADPS 1959 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I +L G GL L G + ++F W+ M + + R + G K+ V VY Sbjct: 1960 IDVLLLTTQVGGLGLTLT-GADTVIFVEHDWNP-----MKDLQAMDRAHRLGQKKVVNVY 2013 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI +NT++ ++ R K + + ++N Sbjct: 2014 RLITRNTLEAKIMGLQRFKLNVANSVVN 2041 >gi|315053759|ref|XP_003176254.1| ATP-dependent helicase RIS1 [Arthroderma gypseum CBS 118893] gi|311338100|gb|EFQ97302.1| ATP-dependent helicase RIS1 [Arthroderma gypseum CBS 118893] Length = 1178 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------P 98 K+ I++ + I+ F S L ++ + + Sbjct: 1005 SAKVDKTIEILQSLRDSGDEKTIIFSQFTSLLDLIEVPINRRGWNYRRYDGSMKPGDRNA 1064 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + ++ + GLNL + ++ +W+ IE + R + Sbjct: 1065 SVLDFTDNSDCRIMLVSLKAGNSGLNLVA-ASQVIILDPFWNP-----YIEDQAIDRAHR 1118 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V V+ L+ +NT+++ ++ K I + L+ Sbjct: 1119 IGQLRPVMVHRLLVENTVEDRIVALQDKKRQIIEGALDE 1157 >gi|255077387|ref|XP_002502335.1| SNF2 super family [Micromonas sp. RCC299] gi|226517600|gb|ACO63593.1| SNF2 super family [Micromonas sp. RCC299] Length = 712 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 23/222 (10%), Positives = 63/222 (28%), Gaps = 38/222 (17%) Query: 5 HKFQRELYCDLQGENIEAFNSAS---------KTVKCLQLANGA---------VYYDEEK 46 + D+ + I + ++ + N Sbjct: 400 DALVNKTIADVLKK-ISGDSGLVPAGSTALNNMLMQLRKNCNHPDLISGGLDGSIMFPSA 458 Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTL 94 K + L+ ++ K ++ L + Sbjct: 459 DELVEQCGKFRLLDRLLTKLRDKGHKTLIFSQMTKMLDLIESYLEQKGQKVCRIDGSVQW 518 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + E+N + + + G G+NL + ++ + W+ + + Sbjct: 519 QERKKQMDEFNTNPEYGVFLLSTRAGGLGINLTA-ADTVIIYDSDWNPHQDM-----QAM 572 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + V V L ++++ +L R +K ++ L++ Sbjct: 573 DRCHRIGQTKPVHVLRLATAHSVEGKMLSRANSKLALEKLVI 614 >gi|159112449|ref|XP_001706453.1| DNA repair and recombination protein Rhp26p [Giardia lamblia ATCC 50803] gi|157434550|gb|EDO78779.1| DNA repair and recombination protein Rhp26p [Giardia lamblia ATCC 50803] Length = 930 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 27/200 (13%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYY---DEEKHWKEVHDEKIKALEVII---EKANAAP 70 GE I +K V+ + + + K+ L + + Sbjct: 502 GEGITKLT-MAKLVQLQHICDHPGLLSTAPFDDSELYESSCKLTYLMEQLTTLWSQSQDK 560 Query: 71 IIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHP 116 I+V L ++K +D P I ++ + +I L Sbjct: 561 ILVFCQGRMMLNIVEKALLETASFKNAYLRMDGNIPVDARPALISKFSTDPQIRLFLLTT 620 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 G GLNL N + + W+ I+ V R + + V VY + TI Sbjct: 621 RVGGLGLNLTA-ANHVFLLNPNWNPT-----IDDQSVERCWRITQTKKVIVYKVFTGGTI 674 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E + R K + +L+ Sbjct: 675 EEKIFNRQIYKRLLVSRVLD 694 >gi|146420507|ref|XP_001486209.1| hypothetical protein PGUG_01880 [Meyerozyma guilliermondii ATCC 6260] Length = 952 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 61/164 (37%), Gaps = 21/164 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK------------DPCT 100 K+ L+ ++ V +F + Sbjct: 734 SGKLARLDQLLVDLKGDDHRVLIYFQMTKMMDLMEEYLTYRQHRYIRLDGSSKLEDRRDL 793 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +W + +I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 794 VHDWQTKPEIFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 847 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKKE 201 G + V VY L+A+ TI+E + R + K +Q +++ A KKE Sbjct: 848 GQTKQVTVYRLLARGTIEERMRNRAKQKEQVQQVVMEGKASKKE 891 >gi|119592219|gb|EAW71813.1| FLJ20105 protein, isoform CRA_a [Homo sapiens] Length = 1127 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 62/243 (25%), Gaps = 53/243 (21%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-------------------- 41 + Y KF ++ +E + ++ +L + Sbjct: 256 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACCLLNLGTFSAQDGN 313 Query: 42 -----------YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 K+ L ++++ +V L +++ Sbjct: 314 EGEDSPDVDHIDQVTDDTLMEESGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLL 373 Query: 89 PQGR-----------TLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 L + I + G GL L +V F Sbjct: 374 KNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTA-ATRVVIFD 432 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 433 PSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTG 487 Query: 197 ALK 199 K Sbjct: 488 EKK 490 >gi|50549907|ref|XP_502425.1| YALI0D04961p [Yarrowia lipolytica] gi|74689630|sp|Q6CA87|SWR1_YARLI RecName: Full=Helicase SWR1 gi|49648293|emb|CAG80613.1| YALI0D04961p [Yarrowia lipolytica] Length = 1772 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 67/179 (37%), Gaps = 11/179 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + +I + V F + Sbjct: 1453 KLSIAFPDKRLLQYDCGKLQRLATLLQDLIAGGH----RALIFTQMTKVLDVLEQFLNIH 1508 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ + +N + KIP+ S G G+NL G + ++F+ W+ Sbjct: 1509 GLRYMRLDGATKIEQRQLLTERFNTDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWN 1567 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +++ R + G R V +Y ++++TI+ +L++ K + ++++ + Sbjct: 1568 PS-----MDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKQILDNVVIQDGE 1621 >gi|22760345|dbj|BAC11160.1| unnamed protein product [Homo sapiens] Length = 1106 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 62/243 (25%), Gaps = 53/243 (21%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-------------------- 41 + Y KF ++ +E + ++ +L + Sbjct: 235 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACCLLNLGTFSAQDGN 292 Query: 42 -----------YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 K+ L ++++ +V L +++ Sbjct: 293 EGEDSPDVDHIDQVTDDTLMEESGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLL 352 Query: 89 PQGR-----------TLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 L + I + G GL L +V F Sbjct: 353 KNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTA-ATRVVIFD 411 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 412 PSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTG 466 Query: 197 ALK 199 K Sbjct: 467 EKK 469 >gi|310791010|gb|EFQ26543.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1037 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 60/173 (34%), Gaps = 22/173 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K K LQL Y + V K + I+ + Sbjct: 860 KVTKLLQLI---HQYRDNGDRVLVFS-KFAKVIEILREV-----------LHTDGIKHCV 904 Query: 88 FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ + I ++N + I + G G+NL N ++ F + ++ Sbjct: 905 LYGQTSVGERQDLIDDFNKDIDITAFLLTTGAGGTGINLTS-ANKIIIFDQSDNPQD--- 960 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G R V V L+ +TI+EL+ + + K + + + A++ Sbjct: 961 --DIQAENRAHRLGQTRDVEVIRLLTAHTIEELIYKACQKKIELAEKVTGAVE 1011 >gi|302309194|ref|NP_986455.2| AGL212Wp [Ashbya gossypii ATCC 10895] gi|299788244|gb|AAS54279.2| AGL212Wp [Ashbya gossypii ATCC 10895] Length = 903 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 68/207 (32%), Gaps = 35/207 (16%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------------HDEKIKALEVIIEK 65 + +S ++ N + +++ K+K L ++ + Sbjct: 568 MSFNSSLGLITLFKKICNSPSLVSSDSYFQSKVNGGTPALRIAQSTTSGKLKVLMSLLHQ 627 Query: 66 ANAA----PIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIP 110 ++V ++ L + + + ++N I Sbjct: 628 IAHRSDNEKVVVISNYTQTLDIIGNLMSSASLSYLRLDGSTPTKERDAIVNDFNRSQTIF 687 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 S G GLNL G + L+ F W+ ++ ++R + G K+ F+Y L Sbjct: 688 GFLLSAKSGGVGLNL-VGASRLILFDNDWNPS-----VDLQAMSRIHRDGQKKPCFIYRL 741 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 + IDE + QR K+ + L+ Sbjct: 742 VTTGCIDEKIFQRQLMKNNLSKKFLDD 768 >gi|198463980|ref|XP_002135618.1| GA28654 [Drosophila pseudoobscura pseudoobscura] gi|198151489|gb|EDY74245.1| GA28654 [Drosophila pseudoobscura pseudoobscura] Length = 1677 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 71/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1063 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCDHTGGH 1122 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1123 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLSWRQFGYLRLD 1182 Query: 91 -GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N I + + G GLNLQ + +V F W+ + Sbjct: 1183 GTTKAEDRGELLRKFNAKGSDIFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1237 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1238 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1286 >gi|149239807|ref|XP_001525779.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146449902|gb|EDK44158.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 1139 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 69/205 (33%), Gaps = 28/205 (13%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEV---------HDEKIKALEVIIEKANAAP--I 71 S + ++ N ++ ++++ KI L ++ + Sbjct: 790 LTSLALINVFRKICNSPSLLATDEFYQKIATNTFKLSTSSGKIHVLIPLLLEITECKERT 849 Query: 72 IVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 ++ ++ L L+ + + + E+N +I + S G Sbjct: 850 VLISNYTKTLDLLEHVLRKLNLRYTRLDGSTPNNMRNKLVNEFNRNEEIHVFLLSSKSGG 909 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL G + L+ F W+ + ++R + G + F+Y L IDE + Sbjct: 910 MGINL-VGASRLILFDNDWNPST-----DLQSLSRIHRDGQTKPCFIYRLFTAGCIDEKI 963 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 QR KS + L+ V Sbjct: 964 FQRQLMKSKLSSKFLDNDNASKTDV 988 >gi|238882230|gb|EEQ45868.1| TATA-binding protein associated factor MOT1 [Candida albicans WO-1] Length = 1917 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 15/142 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +K + I+E + + F ++++N + I +L Sbjct: 1695 LKDMLDIVENELLRKYLPSVTFMR--------LDGSTDPRDRQSIVRKFNEDPSIDVLLL 1746 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ M + + R + G K+ V VY LI ++ Sbjct: 1747 TTKVGGLGLNLT-GADTVIFVEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRLITKD 1800 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K I ++N Sbjct: 1801 TLEEKIMGLQKFKMNIASTIVN 1822 >gi|224110590|ref|XP_002315568.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222864608|gb|EEF01739.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1050 Score = 88.7 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 78/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYY--------DEEKHWKE 50 + Q++ Y L +++E N+ + ++ + N + Sbjct: 421 QMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYSTGDHLV 480 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ L Sbjct: 481 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRD 540 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I +N+ + G G+NL ++++ + W+ + ++ R Sbjct: 541 ASIDAFNKPGSEKFCFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 594 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 595 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGR 637 >gi|315043318|ref|XP_003171035.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS 118893] gi|311344824|gb|EFR04027.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS 118893] Length = 922 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 67/216 (31%), Gaps = 46/216 (21%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEV------------------------HDEKI 56 + ++ ++ N + KI Sbjct: 535 NSESALQLITILKKVCNSPSLLKPKLEDNGKAEDTSMSAFISSLQPNIHRCLVAGSSGKI 594 Query: 57 KALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + L+ ++ + +++ ++ S L L K + + Sbjct: 595 RVLDQLLYNLQSKTTEKVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPASKRQALVDD 654 Query: 104 WNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNL G + LV F + W+ + + R + G Sbjct: 655 FNRSPPSSCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DIQAMARIHRDG 708 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR +Y L+ + I+E + QR TK + D +++ Sbjct: 709 QKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMD 744 >gi|301117680|ref|XP_002906568.1| chromodomain-helicase-DNA-binding protein 1 [Phytophthora infestans T30-4] gi|262107917|gb|EEY65969.1| chromodomain-helicase-DNA-binding protein 1 [Phytophthora infestans T30-4] Length = 875 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 37/220 (16%) Query: 6 KFQRELYCDLQGENIEAFNSASK-----------TVKCLQLANGAVYYDE-------EKH 47 QR Y ++ +N E N A++ + + N + E Sbjct: 296 AMQRAYYKEVIAKNAEVLNRAARAQGNRVPLLNILPQLRKACNHPYLFPGAEPEPFVEGS 355 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + K+ L I+ K +++ L +Q + Sbjct: 356 HLYENSGKLFVLHQILPRLKQKGHRVLLFSQSPPFLDIIQDFLTLESFAYERIDGSVRGK 415 Query: 98 ---PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 C + + + + + G GLNLQ + ++F ++ + + + Sbjct: 416 ERWQCIERFKKDPETFVFLISTRAGGLGLNLQS-ADTVIFADSDYNPQT-----DLQAIA 469 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + + V + NT++E + +R K + D + Sbjct: 470 RAYRLGQTKPIHVIKFLCANTVEESIYRRSLKKMRMADRI 509 >gi|195127720|ref|XP_002008316.1| GI13420 [Drosophila mojavensis] gi|193919925|gb|EDW18792.1| GI13420 [Drosophila mojavensis] Length = 1723 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1105 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGH 1164 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1165 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLSWRQFGYLRLD 1224 Query: 91 -GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N + + G GLNLQ + +V F W+ + Sbjct: 1225 GTTKAEDRGELLRKFNAKGSDYFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1279 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1280 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1328 >gi|145329971|ref|NP_001077971.1| SYD (SPLAYED); ATPase/ chromatin binding [Arabidopsis thaliana] gi|330253007|gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] Length = 3543 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYD----EEKHWKEVH---- 52 Y K + D G A + A ++ + N E + H Sbjct: 1008 AYQKLLMKRVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPP 1067 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP-QGRTLDK--------- 96 K++ L+ ++ K ++ L ++ +G + Sbjct: 1068 IVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGD 1127 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ P + + G G+NLQ + ++ F W+ + ++ Sbjct: 1128 RGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQA-ADTVILFDTDWNPQ-----VDLQAQA 1181 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V N+++E V K + + + A Sbjct: 1182 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224 >gi|13603721|gb|AAK31908.1|AF247809_1 putative chromatin remodeling protein SYD [Arabidopsis thaliana] Length = 3574 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYD----EEKHWKEVH---- 52 Y K + D G A + A ++ + N E + H Sbjct: 1008 AYQKLLMKRVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPP 1067 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP-QGRTLDK--------- 96 K++ L+ ++ K ++ L ++ +G + Sbjct: 1068 IVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGD 1127 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ P + + G G+NLQ + ++ F W+ + ++ Sbjct: 1128 RGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQA-ADTVILFDTDWNPQ-----VDLQAQA 1181 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V N+++E V K + + + A Sbjct: 1182 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224 >gi|30683830|ref|NP_850116.1| SYD (SPLAYED); ATPase/ chromatin binding [Arabidopsis thaliana] gi|330253006|gb|AEC08100.1| ATPase splayed [Arabidopsis thaliana] Length = 3574 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYD----EEKHWKEVH---- 52 Y K + D G A + A ++ + N E + H Sbjct: 1008 AYQKLLMKRVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPP 1067 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP-QGRTLDK--------- 96 K++ L+ ++ K ++ L ++ +G + Sbjct: 1068 IVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGD 1127 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ P + + G G+NLQ + ++ F W+ + ++ Sbjct: 1128 RGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQA-ADTVILFDTDWNPQ-----VDLQAQA 1181 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V N+++E V K + + + A Sbjct: 1182 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224 >gi|30683833|ref|NP_850117.1| SYD (SPLAYED); ATPase/ chromatin binding [Arabidopsis thaliana] gi|330253005|gb|AEC08099.1| ATPase splayed [Arabidopsis thaliana] Length = 3529 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYD----EEKHWKEVH---- 52 Y K + D G A + A ++ + N E + H Sbjct: 1008 AYQKLLMKRVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPP 1067 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP-QGRTLDK--------- 96 K++ L+ ++ K ++ L ++ +G + Sbjct: 1068 IVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGD 1127 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ P + + G G+NLQ + ++ F W+ + ++ Sbjct: 1128 RGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQA-ADTVILFDTDWNPQ-----VDLQAQA 1181 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V N+++E V K + + + A Sbjct: 1182 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224 >gi|20197603|gb|AAD29835.2| putative SNF2 subfamily transcription regulator [Arabidopsis thaliana] Length = 3571 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYD----EEKHWKEVH---- 52 Y K + D G A + A ++ + N E + H Sbjct: 1005 AYQKLLMKRVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPP 1064 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP-QGRTLDK--------- 96 K++ L+ ++ K ++ L ++ +G + Sbjct: 1065 IVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGD 1124 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ P + + G G+NLQ + ++ F W+ + ++ Sbjct: 1125 RGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQA-ADTVILFDTDWNPQ-----VDLQAQA 1178 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V N+++E V K + + + A Sbjct: 1179 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1221 >gi|60499608|gb|AAX22009.1| SPLAYED splice variant [Arabidopsis thaliana] Length = 3543 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYD----EEKHWKEVH---- 52 Y K + D G A + A ++ + N E + H Sbjct: 1008 AYQKLLMKRVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPP 1067 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP-QGRTLDK--------- 96 K++ L+ ++ K ++ L ++ +G + Sbjct: 1068 IVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGD 1127 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ P + + G G+NLQ + ++ F W+ + ++ Sbjct: 1128 RGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQA-ADTVILFDTDWNPQ-----VDLQAQA 1181 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V N+++E V K + + + A Sbjct: 1182 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224 >gi|255721613|ref|XP_002545741.1| hypothetical protein CTRG_00522 [Candida tropicalis MYA-3404] gi|240136230|gb|EER35783.1| hypothetical protein CTRG_00522 [Candida tropicalis MYA-3404] Length = 1368 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 19/156 (12%) Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCT 100 K+ L+ ++ K N I++ + + Q+ + Sbjct: 1218 GKLAKLDELLVDLKKNGHRILIYFQMTRMMEIFQEYLAFRNYKFMRLDGSTTIEARRELV 1277 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 Q + + + G GLNL + ++F+ W+ ++ + R + G Sbjct: 1278 TQWQTNPEFFIFMLSTRAGGLGLNLTS-ADTVIFYDSDWNPT-----VDAQAMDRAHRIG 1331 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VY L+ +NTI+E + Q+ + K IQ L++N Sbjct: 1332 QTKVVTVYRLLTKNTIEERIRQKAQNKEEIQKLVIN 1367 >gi|157870828|ref|XP_001683964.1| helicase-like protein [Leishmania major strain Friedlin] gi|68127031|emb|CAJ05517.1| putative helicase-like protein [Leishmania major strain Friedlin] Length = 1043 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 66/204 (32%), Gaps = 25/204 (12%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANA 68 L + + S + A + K++ L+ ++ + Sbjct: 564 ALRLLADKGRTHGSQGSVEKRMR-----AAGVPMDAAHLIDPSAKMRYLDTLLPQLKEQG 618 Query: 69 APIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNEG--KIPLLFAHP 116 ++ +F + L L+ + +I +N L Sbjct: 619 HRCLIFSNFTTTLDLLEAMCHLRGHSYERLDGSCNRVERELSILRYNHPASSCFLFLVTT 678 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+ L G + ++ F ++ + +R R + G R V VY L Q TI Sbjct: 679 TAGGVGVTLT-GADTVILFDAHFNPQL-----DRQAADRAHRIGQARTVHVYRLCLQGTI 732 Query: 177 DELVLQRLRTKSTIQDLLLNALKK 200 +E + K+ + D ++ ++ Sbjct: 733 EEHIRDIAARKAYLGDFIVEGGQR 756 >gi|73997418|ref|XP_867816.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 11 [Canis familiaris] Length = 1899 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 25/226 (11%), Positives = 60/226 (26%), Gaps = 38/226 (16%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH-WKEVHDEKIKAL 59 K Y + L + + + + N + + Sbjct: 967 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMVCCASSCSSLGWS 1026 Query: 60 EVII------------------EKANAAPIIVAYHFNSDLARLQKAFPQ----------G 91 I K +++ L L+ G Sbjct: 1027 CSICALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGG 1086 Query: 92 RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T + I +N + G G+NL + ++ + W+ + Sbjct: 1087 ITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HND 1140 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1141 IQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1186 >gi|297826111|ref|XP_002880938.1| hypothetical protein ARALYDRAFT_481680 [Arabidopsis lyrata subsp. lyrata] gi|297326777|gb|EFH57197.1| hypothetical protein ARALYDRAFT_481680 [Arabidopsis lyrata subsp. lyrata] Length = 3451 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 34/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSAS--KTVKCLQLANGAVYYD----EEKHWKEVH---- 52 Y K + D G A + A ++ + N E + H Sbjct: 1004 AYQKLLMKRVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHAEEVNNKIPKHFLPP 1063 Query: 53 ----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP-QGRTLDK--------- 96 K++ L+ ++ K ++ L ++ +G + Sbjct: 1064 IVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGD 1123 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ P + + G G+NLQ + ++ F W+ + ++ Sbjct: 1124 RGALIDGFNKSGSPYFIFLLSIRAGGVGVNLQA-ADTVILFDTDWNPQ-----VDLQAQA 1177 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ V V N+++E V K + + + A Sbjct: 1178 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1220 >gi|167035744|ref|YP_001670975.1| non-specific serine/threonine protein kinase [Pseudomonas putida GB-1] gi|166862232|gb|ABZ00640.1| Non-specific serine/threonine protein kinase [Pseudomonas putida GB-1] Length = 633 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 73/214 (34%), Gaps = 26/214 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD-EKIKALEV 61 Y + + + A + + D + K + + Sbjct: 410 AYDAERNRINAEYG-----AAATLVALTSLRRFCAHPSLMDSTSGSVDPMSFSKFRRFDE 464 Query: 62 IIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNE-G 107 I+E+ +I+ F + + + +D I ++ Sbjct: 465 IVEEIFAIGEKVIIFTSFTAMADMIARHIETRYGAFAGVIDGRLAIDDRQPLIDRFSSVK 524 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 L +P + G GLN+ N ++ ++ W+ +E R + G + V V Sbjct: 525 GGAALVLNPKAGGAGLNITA-ANHVIHYNPEWNPA-----MEDQASARAYRRGQELPVTV 578 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + L+ +T++++V +RLR K + D + ++ + Sbjct: 579 HRLLVSDTVEDVVDERLRRKRALSDTAVIGVEGK 612 >gi|327356510|gb|EGE85367.1| SWI/SNF family DNA-dependent ATPase Ris1 [Ajellomyces dermatitidis ATCC 18188] Length = 1150 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 24/199 (12%), Positives = 66/199 (33%), Gaps = 19/199 (9%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + ++E L + + + + D++ + + L +++ Sbjct: 952 EAKKEYIRYLNDNWVTSAKIEKTMETLRSIQSRIPEGDDQPEKTIIFSQ-FTTLLDLLQV 1010 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLN 124 + + + E+++ K ++ + GLN Sbjct: 1011 PIEREGWGYCRY-----------DGSMQPSERNEAVLEFSDSKDRTIMLISLKAGNSGLN 1059 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++ +W+ IE + R + G R V V+ + + T+++ +L+ Sbjct: 1060 LT-VASQVIILDPFWNP-----YIEEQAIDRAHRIGQLRPVMVHRIFVKGTVEDRILELQ 1113 Query: 185 RTKSTIQDLLLNALKKETI 203 K + + L+ +TI Sbjct: 1114 DRKRALVEGALDEKASQTI 1132 Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 16/65 (24%), Gaps = 6/65 (9%) Query: 3 QYHKFQRELYC----DLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + L+ I N ++ Q D+ KI Sbjct: 748 LYDALESKTQVRFNKYLREGTIGRNYSNILVLLLRLRQTCCHPHLIDDLSVETIAEAAKI 807 Query: 57 KALEV 61 +E Sbjct: 808 DLIEN 812 >gi|226292781|gb|EEH48201.1| helicase swr1 [Paracoccidioides brasiliensis Pb18] Length = 1679 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1338 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQSGGHRALIFTQMTK 1381 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1382 MLDILEQFLNIHGHRYLRLDGATKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-G 1440 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1441 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1495 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1496 MLDDVIIQEGE 1506 >gi|126322473|ref|XP_001379449.1| PREDICTED: similar to RAD54B protein [Monodelphis domestica] Length = 1087 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 76/249 (30%), Gaps = 57/249 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVY----------------- 41 ++ Y K LQG A + +L N Sbjct: 473 IELYRKLLSSQAVRFCLQGILENAPHLL-CIGALKKLCNHPCLLFKSLKEKENNSSSEQY 531 Query: 42 ---------------YDEEKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLA 82 + E K++ L ++ + + +++ ++ L Sbjct: 532 EEYNFSEGLIDAYPADYNPNTFSETDSGKLQVLTKLLAAIRELSPSEKVVLVSNYTQTLN 591 Query: 83 R-LQKAFPQGRTLDK---------DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGN 130 G T + + +N + + G GLNL GG+ Sbjct: 592 ILQAVCTRHGYTCTRLDGQTPVVQRQQIVDGFNCKHSSVFIFLLSSKAGGVGLNL-IGGS 650 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ + + W+ + + R + G K +V +Y L+ TI+E + QR +K + Sbjct: 651 HLILYDIDWNPAT-----DIQAMARVWRDGQKHSVHIYRLLTTGTIEEKIYQRQISKQGL 705 Query: 191 QDLLLNALK 199 +++ K Sbjct: 706 SGAVVDLAK 714 >gi|306419502|emb|CBW48565.1| C. elegans protein Y111B2A.22d, confirmed by transcript evidence [Caenorhabditis elegans] Length = 2249 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 7/122 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F S +++ ++ +N + K+ S G G+NL G + ++F+ Sbjct: 1077 FLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGGVGVNLT-GADTVIFY 1135 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ ++ R + G R V +Y LI++ TI+E +L++ K + +L + Sbjct: 1136 DSDWNPT-----MDAQAQDRCHRIGQTRNVSIYRLISERTIEENILRKATQKRRLGELAI 1190 Query: 196 NA 197 + Sbjct: 1191 DE 1192 >gi|300796537|ref|NP_001178977.1| chromodomain-helicase-DNA-binding protein 1 [Bos taurus] Length = 1810 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 735 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 794 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 795 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 854 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 855 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 908 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 909 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 952 >gi|297477562|ref|XP_002689460.1| PREDICTED: chromodomain helicase DNA binding protein 1-like [Bos taurus] gi|296485027|gb|DAA27142.1| chromodomain helicase DNA binding protein 1-like [Bos taurus] Length = 1810 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 735 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 794 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 795 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 854 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 855 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 908 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 909 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 952 >gi|167535306|ref|XP_001749327.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772193|gb|EDQ85848.1| predicted protein [Monosiga brevicollis MX1] Length = 1151 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 22/160 (13%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDP 98 H K+ L ++ + +++ L + +T D+ Sbjct: 556 HSGKLACLNDLLPRLRRGGHRVLIFSQSRKFLQAVASVLDHHGLTFQQLDGSVKTADERQ 615 Query: 99 CTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N+ + G GL L G N ++ W+ ++ V R Sbjct: 616 ALVDKFNKATTDELFAMLLTTQVGGVGLTLT-GANRVIICDPSWNPS-----VDAQAVDR 669 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R V VY L+ TI+E + ++ K ++Q + Sbjct: 670 AYRIGQTREVLVYRLVTCGTIEEKMYRKQIFKGSLQRSAM 709 >gi|156030975|ref|XP_001584813.1| hypothetical protein SS1G_14268 [Sclerotinia sclerotiorum 1980] gi|154700659|gb|EDO00398.1| hypothetical protein SS1G_14268 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1595 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 67/183 (36%), Gaps = 35/183 (19%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA 87 + LQ G K++ L+ ++ K ++ L L++ Sbjct: 1266 KRLLQYDCG----------------KLQTLDKLLRKLQAGGHRALIFTQMTKVLDILEQF 1309 Query: 88 FPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + +N +I S G G+NL G + ++F+ Sbjct: 1310 LNIHGHKYLRLDGATKIEQRQILTDRFNNDTRILAFILSSRSGGLGINLT-GADTVIFYD 1368 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L W+ +++ R + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1369 LDWNPA-----MDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKANQKRMLDDVVIQ 1423 Query: 197 ALK 199 + Sbjct: 1424 EGE 1426 >gi|240281981|gb|EER45484.1| SHREC complex subunit Mit1 [Ajellomyces capsulatus H143] Length = 676 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 72/198 (36%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEKAN--AAPIIVAY 75 ++ + Y + + V+ K++ LE+++ K +++ Sbjct: 53 LMQLRKCLCHPFVYSKAIEERTVNAALSHRNLVEASSKLQLLEMLLPKLQERGHRVLIFS 112 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F +L ++ L + I E+N P S G G+ Sbjct: 113 QFLDNLDVMEDFLDGLGLLHRRLDGSMTSLQKQKQIDEFNVPGSPYFAFLLSTRSGGVGI 172 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + +V ++ + + ++R + G ++ V V+ L+ + + +E ++Q Sbjct: 173 NL-ATADTVVIMDPDFNPHQ-----DIQALSRAHRIGQRKKVLVFQLVTKGSAEEKIMQM 226 Query: 184 LRTKSTIQDLLLNALKKE 201 + K + +L+ + E Sbjct: 227 GKKKMALDQVLIEHMDVE 244 >gi|145362201|ref|NP_973689.2| transcription regulatory protein SNF2, putative [Arabidopsis thaliana] gi|330255399|gb|AEC10493.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 877 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 29/235 (12%), Positives = 84/235 (35%), Gaps = 41/235 (17%) Query: 2 KQYHK-FQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEV 51 K Y ++EL +L + + ++ + + + EE Sbjct: 315 KIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQ 374 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPC 99 K+ L+ ++++ + +++ S L LQ ++ Sbjct: 375 ASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFA 434 Query: 100 TIQEWNEGKIP------------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I+ ++ + + G GLNL + ++F+ W+ + Sbjct: 435 AIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVA-ADTVIFYEQDWNPQ----- 488 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL-NALKKE 201 +++ + R + G V L+ +++++E++L+R K + ++ + ++++ Sbjct: 489 VDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEK 543 >gi|312215580|emb|CBX95532.1| similar to SNF2 family helicase/ATPase [Leptosphaeria maculans] Length = 1194 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 79/212 (37%), Gaps = 22/212 (10%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANG--AVYYDEEKHWKEVHDEKIKALEVII- 63 + +++ + + I + +C QLA A+ E K+ + + K+ AL ++ Sbjct: 896 LREDMFAESNADIIYEELQLYQDYQCHQLATKYKALKKFELKNHEWMDSGKVTALLALLK 955 Query: 64 -EKANAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPCTIQ-EWNEGKIPL 111 K N +V F S D + + + +++ I L Sbjct: 956 KYKENGDRALVFSQFTSVMDILGWVFDDHDINFMRMDGSTPIAERQSLMDVFYSDTSIEL 1015 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 S G G+NL N ++ F ++ ++ + R + G R V V L+ Sbjct: 1016 FMISTKSGGAGINL-ACANKVIIFDSSFNPQD-----DIQAENRAHRVGQTREVEVVRLV 1069 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + T++E + +K + D ++ + E+ Sbjct: 1070 TKGTVEEQIYALGVSKLEL-DKMVQGEEAEST 1100 >gi|123493351|ref|XP_001326267.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121909179|gb|EAY14044.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1325 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 25/231 (10%), Positives = 70/231 (30%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + +L + + +++ ++ N E ++ K E Sbjct: 434 IYKLLLDDHRDELLQTLGTSSLTSFKNISMELRKICNHPFLTHETLVKEQYKQRKGINRE 493 Query: 61 VIIEKA-----------------------NAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 + ++ +++ L +Q+ Sbjct: 494 MTEQEDMESLVGVSGKMILLDKLLPKLKEGGHKVLIFSQMTKVLDIIQRFLDWRNFHYER 553 Query: 96 --------KDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +I+ + + + G G+NL + ++ + W+ + Sbjct: 554 LDGSVSVERRSESIERFTTFDDSFVFLLSTRAGGQGINLT-VADTVIIYDSDWNPQN--- 609 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G + V VY LI +N+ +E + +R K + ++ + Sbjct: 610 --DIQAMARCHRIGQDKEVKVYRLITKNSYEEEMFERASMKLGLDKVITDG 658 >gi|116180352|ref|XP_001220025.1| hypothetical protein CHGG_00804 [Chaetomium globosum CBS 148.51] gi|88185101|gb|EAQ92569.1| hypothetical protein CHGG_00804 [Chaetomium globosum CBS 148.51] Length = 1644 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 75/226 (33%), Gaps = 35/226 (15%) Query: 1 MKQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y Y L+ N + + ++ +++N + + Sbjct: 712 LEYYKNILTRNYAALRDASNGHKQSLLNIMMELKKVSNHPYMFAGAEERVLAGSSRREDQ 771 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 772 IKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVKMLDILGDYLRVRGYQFQRLDGTIP 831 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I +N + G G+NL + ++ + W+ + + Sbjct: 832 AGPRRMAINHFNADDSDDFCFLLSTRAGGLGINLMT-ADTVIIYDSDWNPQA-----DLQ 885 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G KR V VY L+A+ TI+E V+ R R K ++ L + A Sbjct: 886 AMARAHRIGQKRPVNVYRLVAKQTIEEEVVNRARNKLFLEYLTIQA 931 >gi|306419500|emb|CBW48563.1| C. elegans protein Y111B2A.22b, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1882 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 7/122 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F S +++ ++ +N + K+ S G G+NL G + ++F+ Sbjct: 1223 FLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTRSGGVGVNLT-GADTVIFY 1281 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ ++ R + G R V +Y LI++ TI+E +L++ K + +L + Sbjct: 1282 DSDWNPT-----MDAQAQDRCHRIGQTRNVSIYRLISERTIEENILRKATQKRRLGELAI 1336 Query: 196 NA 197 + Sbjct: 1337 DE 1338 >gi|42523166|ref|NP_968546.1| helicase/SNF2 family protein [Bdellovibrio bacteriovorus HD100] gi|39575371|emb|CAE79539.1| putative helicase/SNF2 family domain protein [Bdellovibrio bacteriovorus HD100] Length = 1330 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 76/211 (36%), Gaps = 22/211 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y++ ++ + GE+ + ++ Q + E K+ K K++AL Sbjct: 1106 AYNQRIQDTIRE-AGESQSQLQMLTALLRLRQACSDPGALPEVKYEKTPP--KLEALMDS 1162 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI- 109 +++ + +V F L R + + ++++NE K Sbjct: 1163 LQEIIESGESALVFTQFLQTLERTEKLLKAVGIPVFVLHGAIPTKQRQKILKDFNETKGG 1222 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + G GLNL + + WW+ +E R + G ++AV V+ Sbjct: 1223 AVLVMTLKTGGVGLNLTK-ASYVFHLEPWWNPS-----VENQATDRAHRLGQRKAVQVFR 1276 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 I +++E + K+ L + + Sbjct: 1277 YIMHESLEEKMELLKERKNRKFQSLFSETEA 1307 >gi|297848774|ref|XP_002892268.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297338110|gb|EFH68527.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 843 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 52/147 (35%), Gaps = 17/147 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIP 110 ++E+ +A IV F S L + + +D + + Sbjct: 684 MVERDGSAKAIVFSQFTSFLDIINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCR 743 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G LNL + + WW+ +ER R + G + + V Sbjct: 744 VFLMSLKAGGVALNLT-VASHVFMMDPWWNPA-----VERQAQDRIHRIGQYKPIRVVRF 797 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I +NT++E +L+ + K + + + Sbjct: 798 IIENTVEERILRLQKKKELVFEGTVGG 824 >gi|134076845|emb|CAK45266.1| unnamed protein product [Aspergillus niger] Length = 1504 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 75/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y + Y L + + + ++ + +N + + Sbjct: 679 LEYYKNILTKNYAALNDGARGQKQSLLNIMMELKKASNHPFMFPNAEARILEGSTRREDV 738 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ-KAFPQGRTLDK------ 96 K+ L+ ++ K + +++ L L +G T + Sbjct: 739 LRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMEFRGYTYQRLDGTIP 798 Query: 97 ---DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + +V F W+ + + Sbjct: 799 AAARRLAIEHYNAPGSNDFAFILSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 852 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E V++R R K + Sbjct: 853 AMARAHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLL 891 >gi|308509388|ref|XP_003116877.1| CRE-BTF-1 protein [Caenorhabditis remanei] gi|308241791|gb|EFO85743.1| CRE-BTF-1 protein [Caenorhabditis remanei] Length = 1668 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 72/224 (32%), Gaps = 33/224 (14%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 M Y + D+ + A + K QL E + K DE + Sbjct: 1392 MLVYDTLLKIGAPQDILAKARTARSG--KMEALKQL------LIECEICKNPDDEVLPEA 1443 Query: 60 EVI---IEKANAAPIIVAYHFNSDLARLQKAFPQGR--------------TLDKDPCTIQ 102 + + E ++ + + + A G + Sbjct: 1444 DELGGLNEAGPGHRALIFCQWKTSAKLVSNALSSGEFGSVVSHLVLDGDVPAGDRMKMVN 1503 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + I +L G GLNL G + ++F W+ M + + R + G Sbjct: 1504 RFNEDKTIDVLILTTHVGGVGLNLT-GADTVIFLDHDWNP-----MKDLQAIDRAHRLGQ 1557 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R V VY LI Q T++E V+ + K L+ A + + Sbjct: 1558 TRNVNVYRLITQGTVEEKVMSLAKFKLNTAQALIGADNTSMMTM 1601 >gi|194100669|ref|YP_002003418.1| gp60 [Mycobacterium phage Predator] gi|192758385|gb|ACF05157.1| gp60 [Mycobacterium phage Predator] Length = 670 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 70/219 (31%), Gaps = 26/219 (11%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLAN------GAVYYDEEKHWKEVHDE 54 KQY + +RE ++ GE I ++ +C Q+AN G K Sbjct: 433 KQYREIEREALINIGGEDEITVNGVLAEMTRCKQIANSCLKTDGFKSDGNPKVVPVFPSN 492 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQ 102 K + + + N IVA F L + + + Sbjct: 493 KAEWIHDFLVDRIENGTKTIVASQFTGFLNTLSAELEKKGIKHYLYTGATNEPERKRIRK 552 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+ ++ + S G L L + +V W ++ +Q+ +R + Sbjct: 553 EFQSESGDMVVLLNTKSGGVSLTL-DLADDVVIVDQTWIPDDQEQVEDR-----AHRVSR 606 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V ++ L + TIDE + + +L + Sbjct: 607 NHNVVIWNLASLGTIDEDIAVLNTERGEAISSILEKQRG 645 >gi|146415248|ref|XP_001483594.1| hypothetical protein PGUG_04323 [Meyerozyma guilliermondii ATCC 6260] Length = 1367 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 72/211 (34%), Gaps = 40/211 (18%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-----------------VHDEKIKAL 59 G I N ++ K +N +D + + K+ L Sbjct: 592 GLQISLLNVMAELKK---ASNHPYLFDGAEERVLGTLTSSANRESVLRGMIMSSGKMVLL 648 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 E ++ + +++ L L G + +I +N Sbjct: 649 EQLLTRLRKEGHRVLIFSQMVRMLDILGDYLSIKGYAFQRLDGGIPSSQRRISIDHFNAP 708 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G G+NL + ++ F W+ + + + R + G K V Sbjct: 709 DSRDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQAMARAHRIGQKNHV 762 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY ++++TI+E +L+R R K ++ +++ Sbjct: 763 SVYRFVSKDTIEEEILERARKKMILEYAIIS 793 >gi|15220993|ref|NP_172004.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] gi|332189671|gb|AEE27792.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana] Length = 833 Score = 88.7 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 52/147 (35%), Gaps = 17/147 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIP 110 ++E+ +A IV F S L + + +D + + Sbjct: 674 MVERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCR 733 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G LNL + + WW+ +ER R + G + + V Sbjct: 734 VFLMSLKAGGVALNLT-VASHVFMMDPWWNPA-----VERQAQDRIHRIGQYKPIRVVRF 787 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I +NT++E +L+ + K + + + Sbjct: 788 IIENTVEERILRLQKKKELVFEGTVGG 814 >gi|292630870|sp|A6ZL17|RDH54_YEAS7 RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|151946464|gb|EDN64686.1| rad54-like protein [Saccharomyces cerevisiae YJM789] Length = 924 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 72/213 (33%), Gaps = 34/213 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------------VHDEKIKA 58 L + +S ++ N + ++K ++ K++ Sbjct: 575 ARLDFGQLTFSSSLGLITLLKKVCNSPGLVGSDPYYKSHIKDTQSQDSYSRSLNSGKLRV 634 Query: 59 LEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L ++ K ++V ++ L ++ + + +N Sbjct: 635 LMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFN 694 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I S G GLNL G + L+ F W+ ++ ++R + G K+ Sbjct: 695 RNPAIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPS-----VDLQAMSRIHRDGQKKP 748 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y L+ IDE +LQR K+++ L Sbjct: 749 CFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 781 >gi|320589247|gb|EFX01709.1| chromodomain helicase [Grosmannia clavigera kw1407] Length = 1719 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 35/223 (15%) Query: 4 YHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----------- 51 Y Y L + + ++ +++N + + Sbjct: 719 YKNILTRNYAALSDASGGHKQSLLNIMMELKKISNHPYMFAGVEERVLKGSVRREDQIKG 778 Query: 52 ---HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K + +++ L L + Sbjct: 779 LITSSGKMMLLDQLLAKLKKDNHRVLIFSQMVKMLDLLADYLRVRGYQFQRLDGTIPAGP 838 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + G G+NL + ++ + W+ + + + Sbjct: 839 RRMAINHFNAENSDDFCFLLSTRAGGLGINLMT-ADTVIIYDSDWNPQA-----DLQAMA 892 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V VY L+A+ TI+E V++R R K ++ L + A Sbjct: 893 RAHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTIQA 935 >gi|260949593|ref|XP_002619093.1| hypothetical protein CLUG_00252 [Clavispora lusitaniae ATCC 42720] gi|238846665|gb|EEQ36129.1| hypothetical protein CLUG_00252 [Clavispora lusitaniae ATCC 42720] Length = 351 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 60/165 (36%), Gaps = 20/165 (12%) Query: 47 HWKEVHDEKIKALEVIIEKAN----AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 H + K+ +I+ IIV HF + + A Q Sbjct: 166 HKGFLPSAKMNKTLDLIKDITTSNLDEKIIVFSHFTTTFDLMGYALKQENIKYLRYDGSM 225 Query: 98 -----PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 TI+++ EG +L + GL L + ++ +W+ +E Sbjct: 226 NIDSKNATIKDFYEGNTRVLLLSLKAGNVGLTLT-CASHVIIMDPFWNP-----FVEDQA 279 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V VY ++ ++++++ ++ K + + L+ Sbjct: 280 MDRAHRFGQMKPVHVYKILIRDSVEDRIMDLQERKKELINAALDE 324 >gi|154297606|ref|XP_001549229.1| hypothetical protein BC1G_12648 [Botryotinia fuckeliana B05.10] gi|150858471|gb|EDN33663.1| hypothetical protein BC1G_12648 [Botryotinia fuckeliana B05.10] Length = 1607 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 67/183 (36%), Gaps = 35/183 (19%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA 87 + LQ G K++ L+ ++ K ++ L L++ Sbjct: 1278 KRLLQYDCG----------------KLQTLDKLLRKLQAGGHRALIFTQMTKVLDILEQF 1321 Query: 88 FPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + +N +I S G G+NL G + ++F+ Sbjct: 1322 LNIHGHKYLRLDGATKIEQRQILTDRFNNDTRILAFILSSRSGGLGINLT-GADTVIFYD 1380 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L W+ +++ R + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1381 LDWNPA-----MDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKANQKRMLDDVVIQ 1435 Query: 197 ALK 199 + Sbjct: 1436 EGE 1438 >gi|116197901|ref|XP_001224762.1| hypothetical protein CHGG_07106 [Chaetomium globosum CBS 148.51] gi|88178385|gb|EAQ85853.1| hypothetical protein CHGG_07106 [Chaetomium globosum CBS 148.51] Length = 1129 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 17/162 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR--------- 92 + + KI + N ++V H L LQ F Sbjct: 564 MLNLANSEFCGKWKILKKLLRFWHENGDKVLVFSHSVRLLRILQHLFHNTSYNVSFLDGT 623 Query: 93 -TLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ + ++N + + G GLN+ N +V F W+ + Sbjct: 624 LSYEERQKVVDDFNSDPSQFVFLISTKAGGVGLNITS-ANKVVIFDPHWNPA-----YDL 677 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ L++ TI+E+V R K + Sbjct: 678 QAQDRAYRIGQVRDVDVFRLVSAGTIEEIVYARQIYKQQQAN 719 >gi|308486424|ref|XP_003105409.1| CRE-ROM-4 protein [Caenorhabditis remanei] gi|308256514|gb|EFP00467.1| CRE-ROM-4 protein [Caenorhabditis remanei] Length = 1512 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 55/137 (40%), Gaps = 13/137 (9%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRT----LDKDPCTIQEWNE--GKIPLLFAHPASCGHG 122 + F D + ++ + ++ +N+ + + G G Sbjct: 6 CEFLEFNVFRLDGKTQKCSYFLTEILNLQVQDRQKLVRHFNDNRDASNVFLLSTKAGGVG 65 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL G + L+ + W+ QQ + RI + G R +Y LI TI+E +LQ Sbjct: 66 LNL-IGASRLILYDSDWNPANDQQAMARIW-----RDGQVRPCHIYRLITTGTIEEKMLQ 119 Query: 183 RLRTKSTIQDLLLNALK 199 R K+ + +++A++ Sbjct: 120 RQIKKTGL-GCVIDAIE 135 >gi|225562568|gb|EEH10847.1| helicase swr1 [Ajellomyces capsulatus G186AR] Length = 1674 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1332 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQSGGHRALIFTQMTK 1375 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1376 MLDILEQFLNIHGHRYLRLDGATKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-G 1434 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y I++ TI+ +L++ K Sbjct: 1435 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFISEYTIESNILRKANQKR 1489 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1490 MLDDVIIQEGE 1500 >gi|195019167|ref|XP_001984924.1| GH16759 [Drosophila grimshawi] gi|193898406|gb|EDV97272.1| GH16759 [Drosophila grimshawi] Length = 1716 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 71/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1091 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGH 1150 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1151 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLD 1210 Query: 91 -GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N + + + G GLNLQ + +V F W+ + Sbjct: 1211 GTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1265 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1266 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1314 >gi|126336343|ref|XP_001367984.1| PREDICTED: similar to hCG1997495, [Monodelphis domestica] Length = 1476 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 13/138 (9%) Query: 69 APIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQEWNEGK---IPLLFAHPASCGH 121 P + + D ++ + + I ++N+ + L + Sbjct: 773 MPCLPSSDGQRDQNWVRNFSYYRLDGSTSASERERLINQFNDPNNSSVWLFLLSTRAGCL 832 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL G N +V F W+ + V R + G K+ +Y L++ T+++ + Sbjct: 833 GVNL-IGANRVVVFDASWNP-----CHDAQAVCRVYRYGQKKPCHIYRLVSDYTLEKKIY 886 Query: 182 QRLRTKSTIQDLLLNALK 199 R +K + D +++ L Sbjct: 887 DRQISKQGMSDRVVDDLN 904 >gi|326473366|gb|EGD97375.1| dsDNA-dependent ATPase [Trichophyton tonsurans CBS 112818] Length = 922 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 68/216 (31%), Gaps = 46/216 (21%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEV------------------------HDEKI 56 + ++ ++ N + KI Sbjct: 533 NSESALQLITILKKVCNSPSLLKPKVEDNGKGEDSSMSAFISSLPPNIHRCLAAGSSGKI 592 Query: 57 KALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + L+ ++ + +++ ++ S L L K +++ Sbjct: 593 RVLDQLLYNLQSKTTEKVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVED 652 Query: 104 WN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNL G + LV F + W+ + + R + G Sbjct: 653 FNRSPSSSCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DIQAMARIHRDG 706 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR +Y L+ + I+E + QR TK + D +++ Sbjct: 707 QKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMD 742 >gi|292630891|sp|B5VE38|RDH54_YEAS6 RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|207347718|gb|EDZ73802.1| YBR073Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 924 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 72/213 (33%), Gaps = 34/213 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------------VHDEKIKA 58 L + +S ++ N + ++K ++ K++ Sbjct: 575 ARLDFGQLTFSSSLGLITLLKKVCNSPGLVGSDPYYKSHIKDTQSQDSYSRSLNSGKLRV 634 Query: 59 LEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L ++ K ++V ++ L ++ + + +N Sbjct: 635 LMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFN 694 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I S G GLNL G + L+ F W+ ++ ++R + G K+ Sbjct: 695 RNPAIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPS-----VDLQAMSRIHRDGQKKP 748 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y L+ IDE +LQR K+++ L Sbjct: 749 CFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 781 >gi|159467693|ref|XP_001692026.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas reinhardtii] gi|158278753|gb|EDP04516.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas reinhardtii] Length = 845 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 7/100 (7%) Query: 97 DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N+ + + G GLNL G N LV + W+ QQ + RI Sbjct: 520 RQIIVDNFNKLNMGQVFLLSTRAGGAGLNL-VGANHLVLYDSDWNPAMDQQAMARIW--- 575 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + VY ++ TI+E V QR K+ + + Sbjct: 576 --RDGQTKPCHVYRMLTTGTIEEKVYQRQLMKADLASATM 613 >gi|320588829|gb|EFX01297.1| DNA excision repair protein [Grosmannia clavigera kw1407] Length = 1166 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 62/183 (33%), Gaps = 26/183 (14%) Query: 30 VKCLQLA---NGAVYYDEEKHWKEVHD----EKIKALEVII--EKANAAPIIVAYHFNSD 80 ++ LQ A Y + D K K L ++ + ++V H Sbjct: 601 MRLLQTCEPDGWASLYRHRDSMVHLADPELCGKWKVLRKLLRFWHDSGDKVLVFSHTVRL 660 Query: 81 LARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 L LQ F + ++ + ++N + + + G GLN+ Sbjct: 661 LQMLQHLFHSTSYSVSYLDGSLSYEERQRVVDDFNTDPAQFVFLISTRAGGVGLNITS-A 719 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 N +V W+ + R + G R V V+ L++ TI+E+V R K Sbjct: 720 NKVVIVDPHWNPA-----YDLQAQDRAYRIGQVRDVDVFRLVSAGTIEEIVYARQIYKQQ 774 Query: 190 IQD 192 + Sbjct: 775 QAN 777 >gi|303283067|ref|XP_003060825.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458296|gb|EEH55594.1| predicted protein [Micromonas pusilla CCMP1545] Length = 214 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 63/187 (33%), Gaps = 33/187 (17%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH-------------DEKIKALEVIIEKAN--AAPII 72 ++ ++ + +E V K+ AL+ ++ K + ++ Sbjct: 34 LLMQLRKVCCHPFLFGDEAVHAAVAKHGGDRVEALIAASGKLTALDEMLPKLHAGGHKVL 93 Query: 73 VAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCG 120 + F+ L L++ +L + +N+ + + G Sbjct: 94 IFSQFSMMLDVLEEFCEARGHAHLRLDGSTSLARRRYETALFNKPDGRHFVYLCSTRAGG 153 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NLQ + ++ W+ ++ R + G KR V V + ++++E + Sbjct: 154 LGINLQS-ADTVILADPDWNPT-----YDQQAQDRAHRLGQKRPVTVIRMCHASSVEEGI 207 Query: 181 LQRLRTK 187 L K Sbjct: 208 LAVAAKK 214 >gi|47226612|emb|CAG07771.1| unnamed protein product [Tetraodon nigroviridis] Length = 1037 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 73/230 (31%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVH----- 52 Y Q+ + E + + ++ ++ N + + H Sbjct: 457 LYRHMQKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPN 516 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ S + ++ F Sbjct: 517 GIISGHDLYRASGKFELLDRILPKLQATNHRVLLFCQMTSLMTIMEDYFSYRNFLYLRLD 576 Query: 91 -GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 577 GTTKSEDRAALLKKFNEEGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ---- 631 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 632 -DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 680 >gi|240281002|gb|EER44505.1| helicase swr1 [Ajellomyces capsulatus H143] Length = 1674 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1332 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQSGGHRALIFTQMTK 1375 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1376 MLDILEQFLNIHGHRYLRLDGATKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-G 1434 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y I++ TI+ +L++ K Sbjct: 1435 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFISEYTIESNILRKANQKR 1489 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1490 MLDDVIIQEGE 1500 >gi|39978121|ref|XP_370448.1| hypothetical protein MGG_06945 [Magnaporthe oryzae 70-15] gi|145013481|gb|EDJ98122.1| hypothetical protein MGG_06945 [Magnaporthe oryzae 70-15] Length = 1103 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 58/178 (32%), Gaps = 27/178 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDL---- 81 + K K + L+ ++ + N ++V H L Sbjct: 553 QLYKLR--------DSPLIQMDPEFCGKWRVLKDLLKFWEGNGDKVLVFSHSVKLLQVLR 604 Query: 82 ------ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 +++ + ++N + + + + G GLN+ N +V Sbjct: 605 ALFQTTHYSYSYLDGSLAIEERQQIVDDFNSDPQQFVFLISTKAGGVGLNITS-ANKVVI 663 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 F W+ + R + G R V V+ L++Q TI+E+V R K + Sbjct: 664 FDPHWNPS-----WDLQAQDRAYRIGQTRDVDVFRLVSQGTIEEIVYARQIYKQQQAN 716 >gi|325092504|gb|EGC45814.1| helicase swr1 [Ajellomyces capsulatus H88] Length = 1674 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1332 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQSGGHRALIFTQMTK 1375 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1376 MLDILEQFLNIHGHRYLRLDGATKVEQRQMLTERFNNDTRILAFILSSRSGGLGINLT-G 1434 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y I++ TI+ +L++ K Sbjct: 1435 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFISEYTIESNILRKANQKR 1489 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1490 MLDDVIIQEGE 1500 >gi|322496039|emb|CBZ31111.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 776 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 59/220 (26%), Gaps = 44/220 (20%) Query: 15 LQGENIEAF-----NSASKTVKCLQLANGAVYY-----------------DEEKHWKEVH 52 L G + A N Q+ N + Sbjct: 272 LGGGDSSAAATVRTNPLLLLTMLSQICNHPWLSLLDEAFAAALSRNPYKAPVAEMGDVFG 331 Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDP--C 99 K+ ++ + +V L RL G T + Sbjct: 332 GAKLWVALQLLRRCVSEQRKTLVFSRSRRFLHLLSFLLQEWRLTHTQVDGNTPSERRCAE 391 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N+ + + G GL + +V + W+ + + R + Sbjct: 392 VERFNNDAGVWVCLLTTQVGGVGLTF-NAASAVVLLDISWNPSA-----DAQAIDRVHRI 445 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G +R V V+ L+ T++E V + K L ++K Sbjct: 446 GQRRDVVVFRLVTCGTVEEKVYRNQIFKRM---AALQSMK 482 >gi|195110153|ref|XP_001999646.1| GI22957 [Drosophila mojavensis] gi|193916240|gb|EDW15107.1| GI22957 [Drosophila mojavensis] Length = 1948 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 75/246 (30%), Gaps = 52/246 (21%) Query: 1 MKQYHKF----QRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYY------------ 42 ++ Y F ++ L + + N Sbjct: 1639 LRLYEDFSNKHLKDCLDKLDDTENLGTKTHIFQALRYLQNVCNHPKLVLRQSGDDLSNVA 1698 Query: 43 -----DEEKHWKEVHDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLARLQKA- 87 + H K+ AL+ ++ + ++ + L ++ Sbjct: 1699 AQLALNNSTLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEHDL 1758 Query: 88 ---FPQGRTLDK---------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 T + + +N + I +L G GLNL G + ++F Sbjct: 1759 LRKHLPSVTYLRLDGSVPASLRQDIVNNFNSDPSIDVLLLTTLVGGLGLNLT-GADTVIF 1817 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W+ M + + R + G K+ V VY LI +N+++E ++ + K + + Sbjct: 1818 VEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMSLQKFKILTANTV 1872 Query: 195 LNALKK 200 ++A Sbjct: 1873 VSADNA 1878 >gi|162312570|ref|XP_001713118.1| SNF2 family helicase Swr1 [Schizosaccharomyces pombe 972h-] gi|46397086|sp|O13682|SWR1_SCHPO RecName: Full=Helicase swr1 gi|159884045|emb|CAA22447.2| SNF2 family helicase Swr1 [Schizosaccharomyces pombe] Length = 1288 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 72/185 (38%), Gaps = 19/185 (10%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR-- 83 K Q + +K + K++ L+ +++ +N +++ L Sbjct: 965 KINPLHQASTRLAIAFPDKRLLQYDCGKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILE 1024 Query: 84 -------LQKAFPQGRTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + G T + + + N+ KIP+ S G G+NL G + ++F Sbjct: 1025 QFLNIHGHRYLRLDGATKIEQRQILTERFNNDDKIPVFILSTRSGGLGINLT-GADTVIF 1083 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + + R + G R V +Y LI++ T++ +L+R K + ++ Sbjct: 1084 YDSDWNPQL-----DAQAQDRSHRIGQTRDVHIYRLISEYTVESNMLRRANQKRMLDKIV 1138 Query: 195 LNALK 199 + + Sbjct: 1139 IQGGE 1143 >gi|169607597|ref|XP_001797218.1| hypothetical protein SNOG_06857 [Phaeosphaeria nodorum SN15] gi|160701447|gb|EAT85508.2| hypothetical protein SNOG_06857 [Phaeosphaeria nodorum SN15] Length = 1249 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 74/219 (33%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 ++ Y Y L +G + + ++ + +N A+ + + Sbjct: 363 LEYYKNILTRNYEALNEGGTGHKQSLLNIVMELKKASNHALLFPNAEAKFLKENATKDET 422 Query: 53 -------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRT 93 K+ L+ ++ K A+ +++ L + Sbjct: 423 LKALITTSGKMMLLDRLLTKLKADGHRVLIFSQMVHMLDILTDYLKLRNYTYQRLDGTVP 482 Query: 94 LDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I +N + G G+NL + +V F W+ + + Sbjct: 483 ASDRKIAIDHFNAPGSDDYCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA-----DLQ 536 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G ++ V VY L++++TI+E +L+R R K + Sbjct: 537 AMARAHRIGQQKPVSVYRLVSKDTIEEEILERARNKRML 575 >gi|218191385|gb|EEC73812.1| hypothetical protein OsI_08529 [Oryza sativa Indica Group] Length = 1765 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 17/143 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLF 113 K+ ++ L L++ ++ +Q +N K L Sbjct: 813 KSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGSTQPEERQTLMQRFNTNPKFFLFI 872 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 S G G+NL G + ++F+ W+ +++ R + G R V +Y LI++ Sbjct: 873 LSTRSGGVGINL-VGADTVIFYDSDWNPA-----MDQQAQDRCHRIGQTREVHIYRLISE 926 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +TI+E +L++ K + DL++ Sbjct: 927 STIEENILKKANQKRALDDLVIQ 949 >gi|308802858|ref|XP_003078742.1| DNA repair protein, SNF2 family (ISS) [Ostreococcus tauri] gi|116057195|emb|CAL51622.1| DNA repair protein, SNF2 family (ISS) [Ostreococcus tauri] Length = 851 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 64/193 (33%), Gaps = 19/193 (9%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNS 79 ++ + V+ + +G + K K L ++ + +V + Sbjct: 418 VDHAVEEDVELRKSCSGEAAAAACRGRSPSLSAKSKFLMSMLERFRIEGHRTLVFSQSQA 477 Query: 80 DLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 L ++ + +D + ++ IP++ G GL L Sbjct: 478 TLDIIEANIREANIDFVRIDGKVNVDERDRRVTKFRSQDDIPVMLLTARVGGLGLTLTE- 536 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 ++ F W+ Q ++R + G + V VY ++ TI+E V +R K Sbjct: 537 ATRVIIFDPAWNPTTDNQSVDR-----AYRIGQTKDVVVYRMVTCGTIEEKVYRRQVFKG 591 Query: 189 TIQDLLLNALKKE 201 ++ + + Sbjct: 592 SLSKACTDGVSGR 604 >gi|321398837|emb|CAM65175.2| putative DNA excision/repair protein SNF2 [Leishmania infantum JPCM5] Length = 776 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 59/220 (26%), Gaps = 44/220 (20%) Query: 15 LQGENIEAF-----NSASKTVKCLQLANGAVYY-----------------DEEKHWKEVH 52 L G + A N Q+ N + Sbjct: 272 LGGGDTSAAATVRTNPLLLLTMLSQICNHPWLSLLDEAFAAALSRNPYKAPVAEMGDVFG 331 Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDP--C 99 K+ ++ + +V L RL G T + Sbjct: 332 GAKLWVALQLLRRCVSEQRKTLVFSRSRRFLHLLSFLLQEWRLTHTQVDGNTPSERRCAE 391 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N+ + + G GL + +V + W+ + + R + Sbjct: 392 VERFNNDAGVWVCLLTTQVGGVGLTF-NAASAVVLLDISWNPSA-----DAQAIDRVHRI 445 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G +R V V+ L+ T++E V + K L ++K Sbjct: 446 GQRRDVVVFRLVTCGTVEEKVYRNQIFKRM---AALQSMK 482 >gi|146074911|ref|XP_001462637.1| DNA excision/repair protein SNF2 [Leishmania infantum JPCM5] Length = 699 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 59/220 (26%), Gaps = 44/220 (20%) Query: 15 LQGENIEAF-----NSASKTVKCLQLANGAVYY-----------------DEEKHWKEVH 52 L G + A N Q+ N + Sbjct: 272 LGGGDTSAAATVRTNPLLLLTMLSQICNHPWLSLLDEAFAAALSRNPYKAPVAEMGDVFG 331 Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDP--C 99 K+ ++ + +V L RL G T + Sbjct: 332 GAKLWVALQLLRRCVSEQRKTLVFSRSRRFLHLLSFLLQEWRLTHTQVDGNTPSERRCAE 391 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N+ + + G GL + +V + W+ + + R + Sbjct: 392 VERFNNDAGVWVCLLTTQVGGVGLTF-NAASAVVLLDISWNPSA-----DAQAIDRVHRI 445 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G +R V V+ L+ T++E V + K L ++K Sbjct: 446 GQRRDVVVFRLVTCGTVEEKVYRNQIFKRM---AALQSMK 482 >gi|115384896|ref|XP_001208995.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114196687|gb|EAU38387.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1110 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 62/169 (36%), Gaps = 19/169 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR----------T 93 K+ + + K+ L ++ + N ++ F + L++ Sbjct: 926 KNDEWMDSGKVNKLCELLRRFTANGDRCLIFSQFTLVMDILEQVLENQHLGFVRLDGRTN 985 Query: 94 LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 986 VEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDVQA 1039 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R V V L+ ++TI+E + +TK + + E Sbjct: 1040 ENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAVAGEDAAE 1088 >gi|58331268|ref|NP_060139.2| DNA excision repair protein ERCC-6-like [Homo sapiens] gi|121948339|sp|Q2NKX8|ERC6L_HUMAN RecName: Full=DNA excision repair protein ERCC-6-like; AltName: Full=ATP-dependent helicase ERCC6-like; AltName: Full=PLK1-interacting checkpoint helicase; AltName: Full=Tumor antigen BJ-HCC-15 gi|84798788|gb|AAI11487.1| Excision repair cross-complementing rodent repair deficiency, complementation group 6-like [Homo sapiens] gi|155675838|gb|ABU25227.1| Plk1-interacting checkpoint helicase [Homo sapiens] Length = 1250 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 62/243 (25%), Gaps = 53/243 (21%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-------------------- 41 + Y KF ++ +E + ++ +L + Sbjct: 379 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACCLLNLGTFSAQDGN 436 Query: 42 -----------YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 K+ L ++++ +V L +++ Sbjct: 437 EGEDSPDVDHIDQVTDDTLMEESGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLL 496 Query: 89 PQGR-----------TLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 L + I + G GL L +V F Sbjct: 497 KNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTA-ATRVVIFD 555 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 556 PSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTG 610 Query: 197 ALK 199 K Sbjct: 611 EKK 613 >gi|68486386|ref|XP_712928.1| hypothetical protein CaO19.4502 [Candida albicans SC5314] gi|68486451|ref|XP_712896.1| hypothetical protein CaO19.11978 [Candida albicans SC5314] gi|46434315|gb|EAK93728.1| hypothetical protein CaO19.11978 [Candida albicans SC5314] gi|46434350|gb|EAK93762.1| hypothetical protein CaO19.4502 [Candida albicans SC5314] Length = 1915 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 15/142 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +K + I+E + + F ++++N + I +L Sbjct: 1695 LKDMLDIVENELLRKYLPSVTFMR--------LDGSTDPRDRQSIVRKFNEDPSIDVLLL 1746 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ M + + R + G K+ V VY LI ++ Sbjct: 1747 TTKVGGLGLNLT-GADTVIFVEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRLITKD 1800 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K I ++N Sbjct: 1801 TLEEKIMGLQKFKMNIASTIVN 1822 >gi|115643432|ref|XP_001197308.1| PREDICTED: similar to Brg1 [Strongylocentrotus purpuratus] gi|115663707|ref|XP_001195839.1| PREDICTED: similar to Brg1 [Strongylocentrotus purpuratus] Length = 1496 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 71/231 (30%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEA-----FNSAS-KTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + + ++ ++ N + + H Sbjct: 1070 LYRHMQTKGIMLTDGSEKDKKGRGGTKALTNTIMQLRKICNHPFMFRHIEESFSEHLGVT 1129 Query: 53 ------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K I++ + + L+ F Sbjct: 1130 GGIISGPDLYRVGGKFELLDRILPKLKALGHRILLFCQMTTLMTILEDFFVYRGFKYLRL 1189 Query: 91 --GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D +Q +NE P + G GLNLQ + ++ F W+ + Sbjct: 1190 DGTTKADDRGILLQTFNEANCPYFIFMLSTRAGGLGLNLQT-ADTVILFDSDWNPHQ--- 1245 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G V V L+ +++E +L R K + ++ A Sbjct: 1246 --DLQAQDRAHRIGQVNEVRVLRLMTVQSVEEKILAAARWKMNMDSKIIQA 1294 >gi|302143565|emb|CBI22318.3| unnamed protein product [Vitis vinifera] Length = 1477 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 69/207 (33%), Gaps = 24/207 (11%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 +L + + ++ + L + + V + + +IE + Sbjct: 1093 DLLHENNYKEVDYSGKMVLLLDILTMC------ADVGDKALVFSQSLS-TLDLIEYYLSK 1145 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL-DKDPCTIQEWNEG---KIPLLFAHPASCGHGLNL 125 GRT + ++ +N+ ++ + G+NL Sbjct: 1146 LSRQGKKGKCWKQGKDWYRLDGRTEGSERQKLVERFNDPLNKRVKCTLISTRAGSLGINL 1205 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N ++ W+ + + R + G + VF Y L+A T++E + +R Sbjct: 1206 HS-ANRVIIVDGSWNPT-----YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1259 Query: 186 TKSTIQDLLLNAL-------KKETIHV 205 TK + +++ K+E +H+ Sbjct: 1260 TKEGLAARVVDRQQVHRTISKEEMLHL 1286 >gi|225465567|ref|XP_002263799.1| PREDICTED: similar to SNF2 domain-containing protein, putative, expressed [Vitis vinifera] Length = 1505 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 69/207 (33%), Gaps = 24/207 (11%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 +L + + ++ + L + + V + + +IE + Sbjct: 1121 DLLHENNYKEVDYSGKMVLLLDILTMC------ADVGDKALVFSQSLS-TLDLIEYYLSK 1173 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTL-DKDPCTIQEWNEG---KIPLLFAHPASCGHGLNL 125 GRT + ++ +N+ ++ + G+NL Sbjct: 1174 LSRQGKKGKCWKQGKDWYRLDGRTEGSERQKLVERFNDPLNKRVKCTLISTRAGSLGINL 1233 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N ++ W+ + + R + G + VF Y L+A T++E + +R Sbjct: 1234 HS-ANRVIIVDGSWNPT-----YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1287 Query: 186 TKSTIQDLLLNAL-------KKETIHV 205 TK + +++ K+E +H+ Sbjct: 1288 TKEGLAARVVDRQQVHRTISKEEMLHL 1314 >gi|168035589|ref|XP_001770292.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162678509|gb|EDQ64967.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1031 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 75/222 (33%), Gaps = 35/222 (15%) Query: 7 FQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYY--------DEEKHWKEV 51 Q++ Y L ++++A N+ + ++ + N + Sbjct: 406 LQKQYYRALLQKDMDAINTGGERKRLLNIAMQLRKCCNHPYLFEGAEPGPPYTTGEHLVE 465 Query: 52 HDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGRTLD----------KDPC 99 K+ L+ ++ K +++ L L+ Sbjct: 466 TAGKMVLLDKLLPKLKQRQSRVLIFSQMTRLLDILEDYCQFRSYQYCRIDGNTSGDDRES 525 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I ++N + G G+NL +I++ + W+ + ++ R Sbjct: 526 SIDQFNAPNSEKFCFLLSTRAGGLGINL-ATADIVILYDSDWNPQ-----VDLQAQDRAH 579 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 580 RIGQKKEVQVFRFCTEFTIEEKVIERAYKKLALDALVIQQGR 621 >gi|324505729|gb|ADY42457.1| DNA repair and recombination protein RAD54B [Ascaris suum] Length = 746 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 69/220 (31%), Gaps = 50/220 (22%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKE-----------------------------VHDEKI 56 + +L N + K V K+ Sbjct: 485 LAIIDMLRKLCNHPSILYQSLTSKHGAFNSCESTLNATVLRAFPSSFEPNCSTIVDSGKL 544 Query: 57 KALEVIIE--KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 ++ + ++V +F L L + + + E+ Sbjct: 545 SVFVKMMVSLRETNEKVVVVSNFTKTLDMLSEVCKGIFCTVTRLDGSVVPHRRMQLVDEF 604 Query: 105 NEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N +P + + G GLNL G + LV F W+ + + R + G K Sbjct: 605 NTSSLPNHVFLLSTKAGGVGLNL-IGASRLVLFDSDWNPA-----FDVQAMARIWRDGQK 658 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL-LNALKKE 201 +Y L+ TIDE +LQR KS + ++ L++L + Sbjct: 659 MPCHIYRLVTAGTIDEKILQRQVMKSGLGTVVELDSLNER 698 >gi|320587503|gb|EFW99983.1| helicase swr1 [Grosmannia clavigera kw1407] Length = 1751 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 67/181 (37%), Gaps = 35/181 (19%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA 87 + LQ G K++AL+ ++ + ++ L L++ Sbjct: 1408 KRLLQYDCG----------------KLQALDRLLRRLQAGGHRALIFTQMTKVLDILEQF 1451 Query: 88 FPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + +N + +I S G G+NL G + ++F+ Sbjct: 1452 LNIHGHKYLRLDGATKIEQRQILTDRFNHDSRILCFILSTRSGGLGINLT-GADTVIFYD 1510 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ +++ R + G R V +Y L++++TI+ +L++ K + D+++ Sbjct: 1511 QDWNPA-----MDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQ 1565 Query: 197 A 197 Sbjct: 1566 E 1566 >gi|301092506|ref|XP_002997108.1| chromatin structure-remodeling complex subunit snf21-like protein [Phytophthora infestans T30-4] gi|262111604|gb|EEY69656.1| chromatin structure-remodeling complex subunit snf21-like protein [Phytophthora infestans T30-4] Length = 1309 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 66/189 (34%), Gaps = 24/189 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA------NAAPIIVAYHFNSDLA 82 ++ ++ N + + + + ++++ +++ + Sbjct: 777 LMQLRKVCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMH 836 Query: 83 RLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGN 130 L+ F + D+ + +N P + + G GLNL + Sbjct: 837 VLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNASDSPFFIFLLSTRAGGLGLNL-ATAD 895 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ F W+ ++ R + G K V V+ L+ + ++E +L R K + Sbjct: 896 TVIIFDSDWNPA-----MDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATDKMNM 950 Query: 191 QDLLLNALK 199 +L++ A K Sbjct: 951 NNLVVEAGK 959 >gi|242057381|ref|XP_002457836.1| hypothetical protein SORBIDRAFT_03g014780 [Sorghum bicolor] gi|241929811|gb|EES02956.1| hypothetical protein SORBIDRAFT_03g014780 [Sorghum bicolor] Length = 1070 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 77/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q++ Y L +++E N+ + ++ + N + Sbjct: 432 QMQKQYYRALLQKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV 491 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ Sbjct: 492 ENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRD 551 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N + + G G+NL +++V + W+ + + R Sbjct: 552 ASIEAFNRPGSEKFVFLLSTRAGGLGINL-ATADVVVLYDSDWNPQA-----DLQAQDRA 605 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 606 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGR 648 >gi|221125834|ref|XP_002164775.1| PREDICTED: similar to TBP-associated factor 170, partial [Hydra magnipapillata] Length = 460 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 82/255 (32%), Gaps = 66/255 (25%) Query: 1 MKQYHKFQR-------ELYCDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKHWK 49 +K Y F + + D+ ++IE A + ++ N H + Sbjct: 139 VKLYEDFSQSQAKKTIDGAVDISSKSIEVKQEAGHIFQALQYLRKVCNHPSLVMTPSHPE 198 Query: 50 EVH-----------------------------------DEKIKALEVIIEKANAAPIIVA 74 + + + + + ++ Sbjct: 199 YSSVCSYLVENKSSLNDIQHSSKLLALKQLLLDCGIGVENNVNLTDELHPVVSQHRALIF 258 Query: 75 YHFNSDLARLQKAFPQGR-------------TLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 + S L ++ + ++ +Q +N + I +L G Sbjct: 259 FQLKSMLNIVENDLFKQHLPSITYLRLDGSVPANQRHNIVQMFNNDPSIDVLLLTTHVGG 318 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL G + ++F W+ M + + R + G K+ V VY LIA++T++E + Sbjct: 319 LGLNLT-GADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLIARSTLEEKI 372 Query: 181 LQRLRTKSTIQDLLL 195 + + K I + ++ Sbjct: 373 MGLQKFKLNIANTVI 387 >gi|194382982|dbj|BAG59047.1| unnamed protein product [Homo sapiens] Length = 960 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 578 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 637 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 638 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 697 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 698 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 753 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 754 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 802 >gi|154273569|ref|XP_001537636.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150415244|gb|EDN10597.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 952 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 72/199 (36%), Gaps = 31/199 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEKAN--AAPIIVAY 75 ++ + Y + + V+ K++ LE+++ K +++ Sbjct: 481 LMQLRKCLCHPFIYSKAIEERTVNAALSHRNLVEASSKLQLLEMLLPKLQERGHRVLIFS 540 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F +L ++ L + I E+N P S G G+ Sbjct: 541 QFLDNLDVMEDFLDGLGLLHRRLDGSMTSLQKQKQIDEFNVPGSPYFAFLLSTRSGGVGI 600 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + +V ++ + + ++R + G ++ V V+ L+ + + +E ++Q Sbjct: 601 NL-ATADTVVIMDPDFNPHQ-----DIQALSRAHRIGQRKKVLVFQLVTKGSAEEKIMQM 654 Query: 184 LRTKSTIQDLLLNALKKET 202 + K + +L+ + E Sbjct: 655 GKKKMALDQVLIEHMDVEG 673 >gi|145479813|ref|XP_001425929.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393001|emb|CAK58531.1| unnamed protein product [Paramecium tetraurelia] Length = 1299 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 80/221 (36%), Gaps = 31/221 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------D 53 ++ Y K + D Q + N + + + N + ++ + Sbjct: 666 LRNYEKLK---VLD-QKKGASKANLLNILMSLRLVCNHPYLFTYKREFPNEDIEEMINQS 721 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 K+K ++ II + +++ F L +Q + I Sbjct: 722 NKLKFVDRIIPRLLEMQHKMLIFSQFTMMLDLMQHYLQLRGYSYERLDGTTSIMDRQRII 781 Query: 102 QEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N GK + + G G+NL + ++F ++ + ++R + Sbjct: 782 DSFNNSTGKSKIFLLSTRAGGLGINLTS-ADTIIFTDSDFNP-----YRDLQAISRAHRM 835 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G V V+ L+++ T +E ++Q K ++++++N + K Sbjct: 836 GQTNKVKVFRLVSKYTAEERIIQIATKKLLLEEIIINPINK 876 >gi|21112521|gb|AAM40750.1| helicase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574424|gb|AAY49834.1| helicase [Xanthomonas campestris pv. campestris str. 8004] Length = 1065 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 35/222 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK------HWKEVHDEKI 56 Y R + + S + Q+ + +++ H K+ Sbjct: 830 LYAAAARRFRETVDSGEGGDTAALSLLHQLRQICANPLAAADDRSEFLSLDEHLRHSPKL 889 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------------KDP 98 L +++ +IV F +Q+A + Sbjct: 890 AWLIEKLQEIQATGEKVIVFTEFRDIQRLIQRAIASRLSYQASIVNGSTSVEAGADDSRQ 949 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + ++ + G G+N+Q N ++ F+ W+ + E R Sbjct: 950 IIIDAFQAKPDFGVIVLSTTAVGFGVNIQA-ANHVIHFTRPWNPAK-----EDQATDRAY 1003 Query: 158 QAGFKRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 + G ++ VFVYY + +E V +RL TK + + +L Sbjct: 1004 RIGQEKEVFVYYPTVLGDGFESFEERVAKRLATKRKLSNDML 1045 >gi|221117267|ref|XP_002154001.1| PREDICTED: similar to yeast Swi2/Snf2-Like family member (ssl-1), partial [Hydra magnipapillata] Length = 2164 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 69/169 (40%), Gaps = 11/169 (6%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 + +Q G + + + KI V+I + V F + + Sbjct: 1257 TRLVQYDCGKLQALND----LLRHLKIGKHRVLIFTQMTKMLDVLERFLNYHGYIYLRLD 1312 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +++ ++ +N + KI + S G G+NL G + +VF+ W+ + Sbjct: 1313 GTTKVEQRQILMERFNQDNKIFIFILSTRSGGLGINLT-GADTVVFYDSDWNPT-----M 1366 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G R V +Y LI++ T++E +L++ + K + ++ + Sbjct: 1367 DAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKAQQKRLLGNIAIEG 1415 >gi|195389136|ref|XP_002053233.1| GJ23773 [Drosophila virilis] gi|194151319|gb|EDW66753.1| GJ23773 [Drosophila virilis] Length = 1952 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 76/246 (30%), Gaps = 52/246 (21%) Query: 1 MKQYHKF----QRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--- 51 ++ Y F ++ L + + N + + Sbjct: 1643 LRLYEDFSNKHLKDCLDKLDDTENLGTKTHIFQALRYLQNVCNHPKLVLRQSGDELTNVA 1702 Query: 52 --------------HDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLARLQKA- 87 H K+ AL+ ++ + ++ + L ++ Sbjct: 1703 AQLALSNSTLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEHDL 1762 Query: 88 ---FPQGRTLDK---------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 T + + +N + I +L G GLNL G + ++F Sbjct: 1763 LRKHLPSVTYLRLDGSVPASLRQDIVNNFNSDPSIDVLLLTTLVGGLGLNLT-GADTVIF 1821 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W+ M + + R + G K+ V VY LI +N+++E ++ + K + + Sbjct: 1822 VEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMSLQKFKILTANTV 1876 Query: 195 LNALKK 200 ++A Sbjct: 1877 VSADNA 1882 >gi|206600048|ref|YP_002242122.1| gp65 [Mycobacterium phage Konstantine] gi|206287136|gb|ACI12481.1| gp65 [Mycobacterium phage Konstantine] Length = 685 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 71/219 (32%), Gaps = 26/219 (11%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVY------YDEEKHWKEVHDE 54 KQY + +RE ++ E I ++ +C Q+AN + + K Sbjct: 433 KQYREIEREALINIGSEDEITVNGVLAEMTRCKQIANSCLQADGFNAMGDVKVRPIFPSN 492 Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQ 102 K + + + N IVA F L L + + + Sbjct: 493 KADWIYDFLSERISNGTKTIVASQFTGFLNVLSEELKKKGVGHYLYTGATQEPERKRIRK 552 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+ ++ + S G L L + ++ W ++ +Q+ +R + Sbjct: 553 EFQSESGEMVVLLNTKSGGVSLTL-DLADDVIIVDQTWIPDDQEQVEDR-----AHRVSR 606 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V ++ L + TIDE + + +L + Sbjct: 607 NHNVTIWNLASLGTIDEDIAVLNNERGEAISSILEKQRG 645 >gi|74209142|dbj|BAE24963.1| unnamed protein product [Mus musculus] Length = 1733 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 70/237 (29%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + + L N + ++ + N + + Sbjct: 707 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEERILEDFRKAHSS 766 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 767 EASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 826 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 827 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 883 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 884 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKG 937 >gi|123424079|ref|XP_001306506.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121888084|gb|EAX93576.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1366 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 29/244 (11%), Positives = 71/244 (29%), Gaps = 54/244 (22%) Query: 2 KQYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-----------YDEEK 46 K Y + L L +I + NS + + ++ N + + Sbjct: 491 KIYKALISENREVLMKKLTKNSIPSLNSLA--TELRKVCNHPYLIKGAEDSILEEFQNKF 548 Query: 47 HWKEVHDEKIKALEVIIEK--------------------ANAAPIIVAYHFNSDLARLQK 86 + +K I + +++ + L L+ Sbjct: 549 DKNSIKSDKNLTKSDIEIEAMINCSGKLILIDKLLPKLKQKNEKVLIFSQWTHILDILED 608 Query: 87 AFPQGRTLDK----------DPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFF 135 + I + + + + G G+NL + ++ F Sbjct: 609 YLRYISFNYERLDGSVKPSDRQTAIDRFKDNANSFVFLISTKAGGVGINLTT-ASTVILF 667 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + + R + G + V VY L+ +NT + +++ K ++ ++ Sbjct: 668 DSDWNPQN-----DLQAEARCHRIGQTKEVKVYRLVTRNTYESKMVEVSCKKMFLEHVIF 722 Query: 196 NALK 199 + L Sbjct: 723 DGLN 726 >gi|193784122|dbj|BAG53666.1| unnamed protein product [Homo sapiens] Length = 1056 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 R F + I ++N+ L + G+NL G N +V F Sbjct: 367 WVRNISHFHGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 425 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ ++Y L+A T+++ + R +K + D +++ Sbjct: 426 SWNP-----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 480 Query: 198 LK 199 L Sbjct: 481 LN 482 >gi|210075893|ref|XP_503715.2| YALI0E09012p [Yarrowia lipolytica] gi|199426896|emb|CAG79304.2| YALI0E09012p [Yarrowia lipolytica] Length = 1457 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K+ L+ ++ + ++V + + ++ + + Sbjct: 1245 SGKLAKLDELLAELKAGGHRVLVYFQMTKMMDLAEEYLTFKQYNYCRLDGSSKLSDRRDL 1304 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1305 VNDWQTKPELFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1358 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ + TI+E + R + K +Q+++++ Sbjct: 1359 GQTRQVTVYRLLVKGTIEERMRDRAKQKEHVQNVVMSG 1396 >gi|302828188|ref|XP_002945661.1| hypothetical protein VOLCADRAFT_115608 [Volvox carteri f. nagariensis] gi|300268476|gb|EFJ52656.1| hypothetical protein VOLCADRAFT_115608 [Volvox carteri f. nagariensis] Length = 935 Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 19/145 (13%) Query: 70 PIIVAYHFNSDLAR---------LQKAFPQGRTLDK-DPCTIQEWNEGKIP---LLFAHP 116 +V F L ++ G T K ++++ + + Sbjct: 781 KSVVFSQFTGMLNLVGRALEAAGMRYVRLDGCTPAKARADMVRDFARREPDSPVVFLVSL 840 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + + WW+ +E + R + G R V V+ +A +TI Sbjct: 841 KAGGVGMNLTA-ASHVHLLDPWWNPS-----VEEQAMDRVHRLGQTRDVEVFRYVAADTI 894 Query: 177 DELVLQRLRTKSTIQDLLLNALKKE 201 +E +L K + + + E Sbjct: 895 EERMLLLQERKRELANAAFDRRSAE 919 >gi|299751086|ref|XP_001830045.2| transcription regulator [Coprinopsis cinerea okayama7#130] gi|298409213|gb|EAU91710.2| transcription regulator [Coprinopsis cinerea okayama7#130] Length = 1441 Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 74/207 (35%), Gaps = 30/207 (14%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEK--ANAAP 70 + + ++ + AN +D + + + K+ L+ ++ + + Sbjct: 649 ISLLNIAMELKKAANHPYLFDGAEVRTDNNEETLKGLVMSSGKMVLLDKLLARLRQDGHR 708 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIP--LLFAHPAS 118 +++ L L + I +N P + Sbjct: 709 VLIFSQMVRMLDILSDYMTLRGYQHQRLDGMVGSDLRKKAIAHFNAENSPDFAFLLSTRA 768 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL + ++ F W+ + + + R + G K V VY ++++T++E Sbjct: 769 GGLGINL-ETADTVIIFDSDWNPQN-----DLQAMARAHRIGQKSHVSVYRFVSKDTMEE 822 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 VL+R + K ++ ++N + H+ Sbjct: 823 DVLERAKRKMVLEYAIINQMDTTQAHL 849 >gi|297829170|ref|XP_002882467.1| hypothetical protein ARALYDRAFT_477943 [Arabidopsis lyrata subsp. lyrata] gi|297328307|gb|EFH58726.1| hypothetical protein ARALYDRAFT_477943 [Arabidopsis lyrata subsp. lyrata] Length = 1055 Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 79/223 (35%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYD--EEKHWKEVHDEKI 56 + Q++ Y L +++EA N+ + ++ + N + E D I Sbjct: 427 QMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 486 Query: 57 KALEVIIEKAN--------AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 ++ + +++ L L+ L + Sbjct: 487 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERD 546 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL ++++ + W+ + ++ R Sbjct: 547 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 600 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ ++ I+E V++R K + L++ + Sbjct: 601 HRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGR 643 >gi|303279062|ref|XP_003058824.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226459984|gb|EEH57279.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 828 Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 19/147 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE---GKI 109 + A +V F + L + + + I+ + Sbjct: 683 LGGEPGAKAVVFSQFVAFLDIARDACAAAGFKTCRITGAVPVAERERVIRSFQSNASDAP 742 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++F + G G+NL + + WW+ +E + R + G + V V Sbjct: 743 DVVFVSLKAGGVGINLTA-ASKVYMLDPWWNPA-----VEEQAMDRVHRLGQTKDVTVVR 796 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 A +TI+E +L+ R K + Sbjct: 797 FAATDTIEEKMLELQRRKRELARAAFE 823 >gi|157310977|ref|YP_001468973.1| putative helicase [Corynebacterium phage P1201] gi|95832125|gb|ABF57525.1| putative helicase [Corynebacterium phage P1201] Length = 656 Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 78/229 (34%), Gaps = 36/229 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL--ANGAVYYDEEKHWKE-------VH 52 K Y + Q + L ++ A + + Q G + E+ E + Sbjct: 422 KAYAEMQEDAIAYLDSGSVVANGQLAVMTRLKQFAGCYGTIETKEDADGFEVDAFKPALP 481 Query: 53 DEKIKALEVIIEK----------ANAAPIIVAYHFNSDLARLQKAFPQ----------GR 92 K L + + A ++VA F S + Q A + G Sbjct: 482 SNKFTWLLEFLSELGIDKEGDSGPQARKVVVASQFTSVINIFQAALEKRGIKTLKVAGGV 541 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + + + + + + G L L + +V + ++ +Q+ +R+ Sbjct: 542 SAGERKRAAELFQTDHGPQVFLLNTNAGGVALTL-DRADDIVILDETFIPDDQEQVEDRV 600 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V ++YL ++ TI+E + + + IQ +L+ + Sbjct: 601 -----HRVSRNHNVTIHYLRSKGTIEESIARTTFGRDQIQKQVLDGERG 644 >gi|315043989|ref|XP_003171370.1| serine/threonine protein kinase [Arthroderma gypseum CBS 118893] gi|311343713|gb|EFR02916.1| serine/threonine protein kinase [Arthroderma gypseum CBS 118893] Length = 1707 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 67/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ ++ Sbjct: 1351 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRTLQAGGHRALIFTQMTK 1394 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1395 MLDILEQFLNIHGHRYLRLDGSTKIEQRQLLTERFNNDTRILAFILSSRSGGLGINLT-G 1453 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1454 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1508 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1509 MLDDVVIQEGE 1519 >gi|145539934|ref|XP_001455657.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423465|emb|CAK88260.1| unnamed protein product [Paramecium tetraurelia] Length = 1292 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 80/221 (36%), Gaps = 31/221 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------D 53 ++ Y K + D Q + N + + + N + ++ + Sbjct: 659 LRNYEKLK---VLD-QKKGASKANLLNILMSLRLVCNHPYLFTYKREFPNEDIDEMINQS 714 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 K+K ++ II + +++ F L +Q + I Sbjct: 715 NKLKFVDRIIPRLLEMQHKMLIFSQFTMMLDLMQHYLQLRGYSYERLDGTTSIMDRQRII 774 Query: 102 QEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N GK + + G G+NL + ++F ++ + ++R + Sbjct: 775 DSFNNSTGKSKIFLLSTRAGGLGINLTS-ADTIIFTDSDFNP-----YRDLQAISRAHRM 828 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G V V+ L+++ T +E ++Q K ++++++N + K Sbjct: 829 GQTNKVKVFRLVSKYTAEERIIQIATKKLLLEEIIINPINK 869 >gi|121700957|ref|XP_001268743.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus clavatus NRRL 1] gi|119396886|gb|EAW07317.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus clavatus NRRL 1] Length = 976 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 44/214 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE----------------------KHWKEVHDEKIKA 58 + N+ +L N + +H+ KI+ Sbjct: 565 NSENALHLITILKKLCNSPSLLSPKNADETPSETIAALLSSLPPNLLRHFSPSSSAKIRV 624 Query: 59 LEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ + + I++ ++ S L L K ++++N Sbjct: 625 LDQLLHNLRTSTSEKIVLVSNYTSTLNLLANLLSSLSLPFLRLDGSTPAQKRQSLVEDFN 684 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G GLNL G + LV F + W+ + + R + G K Sbjct: 685 RLPADLCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DIQAMARIHRDGQK 738 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R +Y ++ + +++E + QR TK + D ++ Sbjct: 739 RHCRIYRILLKGSLEEKIWQRQVTKIGLADSVME 772 >gi|66801013|ref|XP_629432.1| myb domain-containing protein [Dictyostelium discoideum AX4] gi|60462823|gb|EAL61023.1| myb domain-containing protein [Dictyostelium discoideum AX4] Length = 1221 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 80/225 (35%), Gaps = 38/225 (16%) Query: 7 FQRELYCDLQGENIEAFNSASK-----------TVKCLQLANGAVYYDEEKHWKEVHDEK 55 Q+E Y L ++++A +K ++ + N +D + E Sbjct: 516 MQKEWYKRLLSKDLDAVVVGAKGNTGRVRLLNICMQLRKACNHPYLFDGAEEEPYTTGEH 575 Query: 56 I---------KALEVIIEKANAAPIIVAYHFNSDLARLQ-KAFPQGRTLDK--------- 96 + + K + +++ + L L+ +G + Sbjct: 576 LIDNSGKMALLDKLLKKLKERGSRVLIFSQMSRMLDILEDYMLYRGYKYARIDGSTESIV 635 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +I+ +N+ L + G G+ L +I++ F W+ + ++ Sbjct: 636 RENSIENYNKPGSDLFAFLLTTRAGGLGITL-NTADIVILFDSDWNPQ-----MDLQAQD 689 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY + +N+++E ++++ K + L++ + Sbjct: 690 RAHRIGQTKPVTVYRFVTENSMEEKMVEKAEMKLQLDALVIQQGR 734 >gi|225428788|ref|XP_002282100.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 912 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 55/242 (22%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE------------------------- 44 + + E ++ + +L N + Sbjct: 459 KNVKKVINEEMKQSKILAYITALKKLCNHPKLIYDTVKSGNQGTSGFEDCMRFFPPEMFS 518 Query: 45 ---------EKHWKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 E W E+ + ++ + + I++ ++ L + + R Sbjct: 519 GRSGAWTGGEGIWVELSGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQLCRERRY 578 Query: 94 LD----------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K + +++ + + G GLNL GGN LV F W+ Sbjct: 579 PYLRLDGTTSINKRQKLVNRFSDPLKDEFVFLLSSKAGGCGLNL-IGGNRLVLFDPDWNP 637 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++ R + G K+ V++Y ++ TI+E V QR +K +Q ++ +K+ Sbjct: 638 AN-----DKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQ-KVIQQEQKD 691 Query: 202 TI 203 ++ Sbjct: 692 SL 693 >gi|195387524|ref|XP_002052444.1| GJ21604 [Drosophila virilis] gi|194148901|gb|EDW64599.1| GJ21604 [Drosophila virilis] Length = 842 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 20/183 (10%) Query: 34 QLANGAVYYDEEKHWKEV-HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----- 85 QL N YD + + K L+ ++ K A +++ F L ++ Sbjct: 629 QLCNKYELYDVKIPDSLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDVVEEYLRI 688 Query: 86 -----KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + I ++N + I + + G G+NL + + + + Sbjct: 689 RKHGFCRLDGATAVKERQDLITDFNVDDNIFVFLLSTKAGGVGINLTA-ADTCIIHDIDF 747 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++ R + G R V +Y LI+++TI+E +L K ++ + + K Sbjct: 748 NP-----YNDKQAEDRCHRMGQSRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSTEK 802 Query: 200 KET 202 E Sbjct: 803 GEV 805 >gi|196010760|ref|XP_002115244.1| hypothetical protein TRIADDRAFT_59226 [Trichoplax adhaerens] gi|190582015|gb|EDV22089.1| hypothetical protein TRIADDRAFT_59226 [Trichoplax adhaerens] Length = 2314 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 18/182 (9%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +Q G + + +HD K K V+I + + F + + Sbjct: 1329 RLIQYDCGKLQALD----ILLHDLKAKGHRVLIFTQMTKMLDILEKFLNFHGHVYLRLDG 1384 Query: 91 GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +++ + +N ++ S G G+NL G + +VF+ W+ ++ Sbjct: 1385 ATPVERRQMLTERFNNDKRVFCFVLSTRSGGLGVNLT-GADTVVFYDSDWNPT-----MD 1438 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-------LKKET 202 R + G R V +Y LI++ TI+E +L++ K + + + LKK+ Sbjct: 1439 AQAQDRCHRIGQTRDVHIYRLISEFTIEENILKKANQKRLLGGVAIEEGNFNTAFLKKDH 1498 Query: 203 IH 204 I Sbjct: 1499 IQ 1500 >gi|50312039|ref|XP_456051.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74689973|sp|Q6CJ38|SWR1_KLULA RecName: Full=Helicase SWR1 gi|49645187|emb|CAG98759.1| KLLA0F21758p [Kluyveromyces lactis] Length = 1572 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 67/177 (37%), Gaps = 11/177 (6%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + A LQ G + K + + + K +I + + F + Sbjct: 1293 TKLSVAFPDKSLLQYDCGKLQ----KLAQLLQNLKDNGHRALIFTQMTKVLDILEQFLNF 1348 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 L ++ + +N + +I + S G G+NL G + ++F+ W Sbjct: 1349 HGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGGLGINLT-GADTVIFYDSDW 1407 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + +++ R + G R V +Y ++ +TI+ +L++ K + ++++ Sbjct: 1408 NPA-----MDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQ 1459 >gi|323448072|gb|EGB03975.1| hypothetical protein AURANDRAFT_55360 [Aureococcus anophagefferens] Length = 1291 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 7/130 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F G + + +N + I S G G+NL G + ++F+ Sbjct: 541 FLCWHGHSYLRLDGGTPPGERQRLMDRFNSDAFIFCFVLSTRSGGLGINLT-GADTVIFY 599 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ ++ + R + G R V +Y LI T++E +L + R K ++ + L Sbjct: 600 DSDWNPA-----MDAQAMDRAHRIGQTRDVHIYRLICIATVEENILLKARQKQKLEFITL 654 Query: 196 NALKKETIHV 205 ++I + Sbjct: 655 TEGNFDSIQL 664 >gi|321253974|ref|XP_003192917.1| DNA repair protein [Cryptococcus gattii WM276] gi|317459386|gb|ADV21130.1| DNA repair protein, putative [Cryptococcus gattii WM276] Length = 993 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 11/151 (7%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-DPCTIQEWNEGKI 109 +H E ++ +N + L R G T K + +N+ K Sbjct: 612 LHSIYQSTEEKVVVVSNWTSTLDLIQGLCKLKRYNYLRLDGSTPPKQRQELVDRFNKDKE 671 Query: 110 P----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL GG+ L+ F W+ + + R + G KR V Sbjct: 672 RQGSFVFLLSAKAGGVGLNL-IGGSRLILFDSDWNPST-----DLQAMARIHRDGQKRPV 725 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++Y L+ N IDE + QR TK+ + D +++ Sbjct: 726 YIYRLLTTNAIDEKIYQRQITKTGLSDQMMD 756 >gi|156843751|ref|XP_001644941.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM 70294] gi|156115595|gb|EDO17083.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM 70294] Length = 1507 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 45/227 (19%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------- 50 K Y +G + N ++ K +N +D + Sbjct: 659 KNYSAL----TAGTKGGHFSLLNVMTELKK---ASNHPYLFDYAEERVLQKFGDGNMSRE 711 Query: 51 -------VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------G 91 + K+ L+ ++ K + +++ L + Sbjct: 712 NILRGLIMSSGKMVLLDQLLTRLKRDGHRVLIFSQMVRMLDIMGDYLSIKGINFQRLDGT 771 Query: 92 RTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + I +N + + G G+NL + ++ F W+ + + Sbjct: 772 VPSAQRRIAIDHFNAPDSNDDVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----D 825 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 826 LQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 872 >gi|157953853|ref|YP_001498744.1| hypothetical protein AR158_C663L [Paramecium bursaria Chlorella virus AR158] gi|156068501|gb|ABU44208.1| hypothetical protein AR158_C663L [Paramecium bursaria Chlorella virus AR158] Length = 458 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 73/218 (33%), Gaps = 24/218 (11%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWK--EVHDE 54 + Y + L+ G+ + ++ Q + + E + Sbjct: 225 ELYDELVENGRLLLKAYNAYGDGEGRMKLLEQLMRMRQCVTNPQLLFMKSDDERWEGNYT 284 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 K+ L+ I+ I+ ++ ++ ++ ++ ++ + Sbjct: 285 KLNMLKREIQNNPIEKTIIFCNWIHEMISIENMLHSIGYDSVMLNGKTPNEQRDINVKRF 344 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N + I S G GLNLQ + + SL W+ E + R + G + Sbjct: 345 NEDDNINFFIVQIESGGIGLNLQ-VASRVFINSLSWNATT-----EIQAIARAHRIGQTK 398 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V V LI NT DE VL + K I + + + E Sbjct: 399 DVTVKRLIINNTFDEYVLNLQQKKLEIASEIFDDKRIE 436 >gi|196014691|ref|XP_002117204.1| hypothetical protein TRIADDRAFT_61248 [Trichoplax adhaerens] gi|190580169|gb|EDV20254.1| hypothetical protein TRIADDRAFT_61248 [Trichoplax adhaerens] Length = 1395 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 69/175 (39%), Gaps = 20/175 (11%) Query: 37 NGAVYYDEEKHWKEV-HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--- 90 NG Y V K++ L+V+++K +++ + L++ Sbjct: 1018 NGWSYMAIPDKKSLVTDSGKLRILDVLLKKLKFEGHRVLIYSQMTRMIDLLEEYMGFRKH 1077 Query: 91 --------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + D+ ++ I + G G+NL + ++F+ W+ Sbjct: 1078 IYMRLDGSSKISDRRDMVADFQSKSDIFAFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT 1136 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ + R + G + V VY L+ TI+ +L+R + KS IQ ++++ Sbjct: 1137 -----VDQQAMDRAHRLGQTKQVTVYRLVTSGTIENRILKRAQEKSEIQKMVISG 1186 >gi|77747807|ref|NP_636826.2| helicase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|77761256|ref|YP_243854.2| helicase [Xanthomonas campestris pv. campestris str. 8004] Length = 641 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 35/222 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK------HWKEVHDEKI 56 Y R + + S + Q+ + +++ H K+ Sbjct: 406 LYAAAARRFRETVDSGEGGDTAALSLLHQLRQICANPLAAADDRSEFLSLDEHLRHSPKL 465 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------------KDP 98 L +++ +IV F +Q+A + Sbjct: 466 AWLIEKLQEIQATGEKVIVFTEFRDIQRLIQRAIASRLSYQASIVNGSTSVEAGADDSRQ 525 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + ++ + G G+N+Q N ++ F+ W+ + E R Sbjct: 526 IIIDAFQAKPDFGVIVLSTTAVGFGVNIQA-ANHVIHFTRPWNPAK-----EDQATDRAY 579 Query: 158 QAGFKRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 + G ++ VFVYY + +E V +RL TK + + +L Sbjct: 580 RIGQEKEVFVYYPTVLGDGFESFEERVAKRLATKRKLSNDML 621 >gi|83774068|dbj|BAE64193.1| unnamed protein product [Aspergillus oryzae] Length = 1471 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 76/219 (34%), Gaps = 35/219 (15%) Query: 1 MKQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 ++ Y + Y L + + + ++ + +N + + Sbjct: 647 LEYYKNILTKNYAALNDGAKGQKQSLLNIMMELKKASNHPFMFPNAEAKILDGSTRREDV 706 Query: 52 ------HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL-QKAFPQGRTLDK------ 96 K+ L+ ++ K + +++ L L + +G T + Sbjct: 707 LRAMITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDLLGEYMEFRGYTYQRLDGTIP 766 Query: 97 ---DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I+ +N + G G+NL + +V F W+ + + Sbjct: 767 AASRRLAIEHYNAPGSSDFAFILSTRAGGLGINLMT-ADTVVLFDSDWNPQA-----DLQ 820 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G R V VY L++++T++E V++R R K + Sbjct: 821 AMARAHRIGQTRPVSVYRLVSKDTVEEEVIERARNKLLL 859 >gi|332035338|gb|EGI71840.1| Snf2 family protein [Pseudoalteromonas haloplanktis ANT/505] Length = 155 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 14/136 (10%) Query: 68 AAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 II+ F S L + + + I E+ GK + + Sbjct: 5 GRKIIIFSQFTSALDLIAQRLEEININFSMLTGQTRQRDKVIDEFTSGKTSVFLISLKAG 64 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLNL + ++ F WW+ +E+ R + G VFVY LI N+I++ Sbjct: 65 GTGLNLTQ-ADTVIHFDPWWNPA-----VEKQATDRAYRIGQTNPVFVYKLIMSNSIEQK 118 Query: 180 VLQRLRTKSTIQDLLL 195 V + + K + D L Sbjct: 119 VFKMQQDKQALVDALF 134 >gi|326429518|gb|EGD75088.1| Rad54b protein [Salpingoeca sp. ATCC 50818] Length = 1070 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 60/197 (30%), Gaps = 29/197 (14%) Query: 5 HKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKALEV 61 + R L E++ LQ + + K+ + Sbjct: 683 EELGRPALSTLDDVEDVSLCGKMQLLSHMLQ----HWRAHPANERVLIVSNSTKVLSRVQ 738 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASC 119 + + A P + K + +N + + Sbjct: 739 ALCEQCAYPFLR--------------LQGNTPTHKRLELVNRFNSRVRDDFVFLMSSKAG 784 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GLN+ G + L+ + W+ + + R + G KR V+VY + TI+E Sbjct: 785 GVGLNI-VGASRLILYDTDWNPAN-----DLQAMARVWRDGQKRHVYVYRFLTTGTIEEK 838 Query: 180 VLQRLRTKSTIQDLLLN 196 + QR K + +++ Sbjct: 839 IYQRQVHKQGLSGSVVD 855 >gi|256083470|ref|XP_002577966.1| helicase [Schistosoma mansoni] gi|238663311|emb|CAZ34204.1| helicase mot1, putative [Schistosoma mansoni] Length = 2340 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 6/114 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ ++ + I L+ A G GLNL G + ++F W+ + + Sbjct: 2180 PVNERHNRVVKFNQDPSIDLMLLTTAVGGLGLNLT-GADTVIFVEHDWNPSK-----DLQ 2233 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G +R V VY LI +++I+E ++ K + + +L A K + Sbjct: 2234 AMDRAHRIGQRRTVNVYRLITEDSIEEQIMNLQAFKLHLANTVLTADNKSLNEM 2287 >gi|145614554|ref|XP_362144.2| hypothetical protein MGG_04589 [Magnaporthe oryzae 70-15] gi|145021462|gb|EDK05591.1| hypothetical protein MGG_04589 [Magnaporthe oryzae 70-15] Length = 1654 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 35/226 (15%) Query: 1 MKQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 ++ Y Y L + + ++ +++N + + Sbjct: 713 LEYYKNILTRNYAALSDASGGHKASLLNIMMELKKVSNHPYMFQGVEERVLAGSTRREDS 772 Query: 51 -----VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K + +++ L L + Sbjct: 773 IKGLIKSSGKMMLLDQLLAKLKKDNHRVLIFSQMVKMLDILGDYLRVRGYQYQRLDGTIP 832 Query: 98 ----PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I +N + G G+NL + ++ + W+ + + Sbjct: 833 AGPRRMAINHFNAPDSEDFCFLLSTRAGGLGINLMT-ADTVIIYDSDWNPQA-----DLQ 886 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G KR V VY L+A+ T++E V+ R R K ++ L + A Sbjct: 887 AMARAHRIGQKRPVNVYRLVAKQTVEEEVVNRARNKLFLEYLTIQA 932 >gi|19115158|ref|NP_594246.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe 972h-] gi|74675924|sp|O13762|YF2C_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C17A2.12 gi|2414584|emb|CAB16565.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe] Length = 897 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 57/150 (38%), Gaps = 6/150 (4%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 K ++ + + +V++ + R + + N+ + ++ Sbjct: 738 SKRNEKILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNNDKDVLVML 797 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + GLNL N ++ +++ IE + R + G ++ V VY I + Sbjct: 798 VSLKAGSVGLNLT-IANHVILQEPFYNPS-----IEDQAIDRVHRLGQQKPVTVYRFITK 851 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETI 203 +TI+E ++ R K + L++ + + Sbjct: 852 DTIEERIVSVQRKKRQLVKEALDSNENNPL 881 >gi|62738897|pdb|1Z3I|X Chain X, Structure Of The Swi2SNF2 CHROMATIN REMODELING DOMAIN OF Eukaryotic Rad54 Length = 644 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 42/201 (20%) Query: 33 LQLANGAVYYDEE---------------------KHWKEVHDEKIKALEVIIEKA---NA 68 +L N E+ K + K+ L+ I+ + Sbjct: 357 KKLCNHPALIYEKCLTGEEGFDGALDLFPQNYSTKAVEPQLSGKMLVLDYILAMTRTTTS 416 Query: 69 APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFAHP 116 +++ ++ L +K ++ K ++ +N P + Sbjct: 417 DKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSS 476 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL G N LV F W+ + + R + G K+ ++Y L++ TI Sbjct: 477 KAGGCGLNL-IGANRLVMFDPDWNPAN-----DEQAMARVWRDGQKKTCYIYRLLSTGTI 530 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E +LQR K + +++ Sbjct: 531 EEKILQRQAHKKALSSCVVDE 551 >gi|148886758|ref|NP_001092144.1| similar to SNF2/RAD54 family protein [Rattus norvegicus] gi|62667178|ref|XP_228546.3| PREDICTED: excision repair cross-complementing rodent repair deficiency complementation group 6 - like [Rattus norvegicus] gi|109512082|ref|XP_001070442.1| PREDICTED: excision repair cross-complementing rodent repair deficiency complementation group 6 - like [Rattus norvegicus] gi|149042163|gb|EDL95870.1| similar to SNF2/RAD54 family protein (predicted) [Rattus norvegicus] Length = 1230 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 70/245 (28%), Gaps = 55/245 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD----------------EE 45 + Y KF ++ +E + ++ +L + E+ Sbjct: 379 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACHLLNLGTVTFSAED 436 Query: 46 KHWKEV-----------------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 ++ +E K+ L ++E + +V L +++ Sbjct: 437 ENEQEDASNMGSIDHLSDNALMQESGKMIFLMALLERLQDEGHQTLVFSQSRQILNIIER 496 Query: 87 AFPQGRTLD-----------KDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + IQ + + G GL L + +V Sbjct: 497 LLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTA-ASRVVI 555 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 556 FDPSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQT 610 Query: 195 LNALK 199 K Sbjct: 611 TGDKK 615 >gi|68568746|sp|Q8RWY3|ISW2_ARATH RecName: Full=Putative chromatin-remodeling complex ATPase chain; AltName: Full=ISW2-like; AltName: Full=Sucrose nonfermenting protein 2 homolog gi|6437558|gb|AAF08585.1|AC011623_18 putative ATPase (ISW2-like) [Arabidopsis thaliana] Length = 1057 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 79/223 (35%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYD--EEKHWKEVHDEKI 56 + Q++ Y L +++EA N+ + ++ + N + E D I Sbjct: 427 QMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 486 Query: 57 KALEVIIEKAN--------AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 ++ + +++ L L+ L + Sbjct: 487 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERD 546 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL ++++ + W+ + ++ R Sbjct: 547 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 600 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ ++ I+E V++R K + L++ + Sbjct: 601 HRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGR 643 >gi|391640|dbj|BAA03262.1| ORF2 [Gallus gallus] Length = 560 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 23/194 (11%), Positives = 62/194 (31%), Gaps = 31/194 (15%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDE-------------KIKALEVIIEKANAAPIIVAYH 76 ++ + N + + + + +I + +++ Sbjct: 1 MELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQ 60 Query: 77 FNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKI--PLLFAHPASCGHGLN 124 L L + + + + +N + G G+N Sbjct: 61 MVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 120 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + +V F W+ + + R + G K+ V +Y L+ + +++E +L+R Sbjct: 121 L-ASADTVVIFDSDWNPQN-----DLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERA 174 Query: 185 RTKSTIQDLLLNAL 198 + K + L++ + Sbjct: 175 KKKMVLDHLVIQRM 188 >gi|255567695|ref|XP_002524826.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223535886|gb|EEF37546.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 874 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 52/147 (35%), Gaps = 17/147 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWNEGKIP 110 ++E+ +A IV F S L + + + +D + + Sbjct: 715 MVERDGSAKGIVFSQFTSFLDLISYSLHKSGINCVQLVGSMSLPARDNAIKRFSEDPNCK 774 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G LNL + + WW+ +ER R + G + + + Sbjct: 775 IFLMSLKAGGVALNLT-VASHVFLMDPWWNPA-----VERQAQDRIHRIGQYKPIRIVRF 828 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +NTI+E +LQ K + + L Sbjct: 829 VIENTIEERILQLQEKKELVFEGTLGG 855 >gi|46121269|ref|XP_385189.1| hypothetical protein FG05013.1 [Gibberella zeae PH-1] Length = 874 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 25/214 (11%), Positives = 70/214 (32%), Gaps = 29/214 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------KHWKEVHDEK 55 + +R +L + I + + + N + K Sbjct: 579 KERERAEAFELAKKQISHKKLGNPMAQLRLVCNSPHNFYNPWKASTELPVDDSIVTASGK 638 Query: 56 IKALEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLD--KDPCTI 101 + L+ ++ + +++ F ++L + G + Sbjct: 639 MLLLDRLLPRLFEGGHKVLIFSQFTTQLDILEDYCAELRGWKVCRIDGSVAQDSRRTQIA 698 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ + + + G G+NL + ++ F ++ ++ + R + G Sbjct: 699 DFNSDPEYKIFLLSTRAGGQGINL-ASADTVILFDSDFNPQQ-----DLQAQDRCHRIGQ 752 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V V+ L ++T++E +L K ++ L++ Sbjct: 753 TRPVVVFRLATKDTVEESLLNSADAKRRLEKLVI 786 >gi|115491909|ref|XP_001210582.1| hypothetical protein ATEG_00496 [Aspergillus terreus NIH2624] gi|114197442|gb|EAU39142.1| hypothetical protein ATEG_00496 [Aspergillus terreus NIH2624] Length = 894 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 76/217 (35%), Gaps = 30/217 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVH------DEKI 56 + +R L I + ++ N Y+ + ++ K+ Sbjct: 597 EEIERAKTIKLAK--IAQKKMQNPVMQARLACNSPHNFYWPWGEDPADIDESLVTASGKM 654 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT------------LDKDPCTIQ 102 L+ ++ I++ F + L LQ Q R+ D+ Sbjct: 655 LLLDRLVSCLLKKEHKILIFSQFKTQLDILQDWATQLRSWNCCRIDGAISQSDRREQIKA 714 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + K + + G G+NL + ++ + W+ ++ + R + G Sbjct: 715 FNTDPKFKIFLLSTRAGGQGINLTA-ADTVILYDSDWNPQQ-----DLQAQDRAHRIGQT 768 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V VY L + T+++ +L++ +K ++ L++ K Sbjct: 769 KPVIVYRLATKGTVEQTLLEKADSKRRLERLVIQKGK 805 >gi|73985397|ref|XP_860617.1| PREDICTED: similar to KIAA0809 protein isoform 2 [Canis familiaris] Length = 1056 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 R F + I ++N+ L + G+NL G N +V F Sbjct: 367 WVRNVSYFHGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 425 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ +Y L+A T+++ + R +K + D +++ Sbjct: 426 SWNP-----CHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDD 480 Query: 198 LK 199 L Sbjct: 481 LN 482 >gi|328705070|ref|XP_001948023.2| PREDICTED: DNA repair and recombination protein RAD54-like [Acyrthosiphon pisum] Length = 751 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 66/220 (30%), Gaps = 45/220 (20%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDE----------------EKHWKEVHDEK---- 55 + N+ + +L + + H +K Sbjct: 422 NDGKVT-SNALAAITLLKKLCAHPDLIIDKIMNGSDGFENSKHLLPPTYIAAHSKKKLMI 480 Query: 56 --------IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 + + +I+ +++ ++ L ++ T K Sbjct: 481 ELSSKLMVLDTMLAVIKTTTTDRVVLISNYTQTLELFERLAKLRNYTFVRLDGSMTAKKR 540 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + N + +S G L G N LV F W+ + + R Sbjct: 541 AKAVDDINSPTSGVFLFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN-----DDQAMARV 595 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ FVY +A +I+E ++QR K + +++ Sbjct: 596 WRDGQKKPCFVYRFLATGSIEEKMMQRQAHKKALSSSVVD 635 >gi|297710314|ref|XP_002831842.1| PREDICTED: DNA excision repair protein ERCC-6-like [Pongo abelii] Length = 1250 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 62/243 (25%), Gaps = 53/243 (21%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-------------------- 41 + Y KF ++ +E + ++ +L + Sbjct: 379 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACGLLNLGTFSAQDGN 436 Query: 42 -----------YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 K+ L ++++ +V L +++ Sbjct: 437 EGEDSPDVDHIDQVTDDTLMEESGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLL 496 Query: 89 PQGR-----------TLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 L + I + G GL L +V F Sbjct: 497 KNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTA-ATRVVIFD 555 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 556 PSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTG 610 Query: 197 ALK 199 K Sbjct: 611 EKK 613 >gi|20259462|gb|AAM13851.1| putative ATPase (ISW2) [Arabidopsis thaliana] Length = 1055 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 79/223 (35%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYD--EEKHWKEVHDEKI 56 + Q++ Y L +++EA N+ + ++ + N + E D I Sbjct: 427 QMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 486 Query: 57 KALEVIIEKAN--------AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 ++ + +++ L L+ L + Sbjct: 487 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERD 546 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL ++++ + W+ + ++ R Sbjct: 547 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 600 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ ++ I+E V++R K + L++ + Sbjct: 601 HRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGR 643 >gi|22330875|ref|NP_187291.2| CHR11 (CHROMATIN-REMODELING PROTEIN 11); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding [Arabidopsis thaliana] Length = 1055 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 79/223 (35%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYD--EEKHWKEVHDEKI 56 + Q++ Y L +++EA N+ + ++ + N + E D I Sbjct: 427 QMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 486 Query: 57 KALEVIIEKAN--------AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 ++ + +++ L L+ L + Sbjct: 487 TNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERD 546 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL ++++ + W+ + ++ R Sbjct: 547 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 600 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ ++ I+E V++R K + L++ + Sbjct: 601 HRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGR 643 >gi|327296738|ref|XP_003233063.1| serine/threonine protein kinase [Trichophyton rubrum CBS 118892] gi|326464369|gb|EGD89822.1| serine/threonine protein kinase [Trichophyton rubrum CBS 118892] Length = 1693 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1337 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQAGGHRALIFTQMTK 1380 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1381 MLDILEQFLNIHGHRYLRLDGSTKIEQRQLLTERFNNDTRILAFILSSRSGGLGINLT-G 1439 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1440 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1494 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1495 MLDDVVIQEGE 1505 >gi|83766213|dbj|BAE56356.1| unnamed protein product [Aspergillus oryzae] Length = 1026 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGR----------T 93 K+ + + KI L ++ K N ++ F + L+ Sbjct: 836 KNNEWMDSGKIDKLCELLKRFKENGDRTLIFSQFTMVMDILEHVLENQHLGFVRLDGRTN 895 Query: 94 LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++E IP+ + G G+NL N +V F ++ + + Sbjct: 896 VEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVVIFDSSFNPQ-----EDVQA 949 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R V V L+ ++TI+E + +TK + + E Sbjct: 950 ENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAVAGEDAGE 998 >gi|302830326|ref|XP_002946729.1| hypothetical protein VOLCADRAFT_120362 [Volvox carteri f. nagariensis] gi|300267773|gb|EFJ51955.1| hypothetical protein VOLCADRAFT_120362 [Volvox carteri f. nagariensis] Length = 1229 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 6/115 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + + ++ +Q + IP+ G GL L + ++ Sbjct: 825 KAMKLSYCRIDGDVASAEERQAHVQRFQNSNIPVFLLTSQVGGLGLTLTA-ADRVIIVDP 883 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 W+ Q ++R + G R V VY LI T++E + +R K + Sbjct: 884 AWNPSVDDQSVDR-----AYRMGQTRDVVVYRLITCGTVEEKIYRRQVFKGGLSK 933 >gi|302511611|ref|XP_003017757.1| hypothetical protein ARB_04640 [Arthroderma benhamiae CBS 112371] gi|291181328|gb|EFE37112.1| hypothetical protein ARB_04640 [Arthroderma benhamiae CBS 112371] Length = 1706 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1350 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQAGGHRALIFTQMTK 1393 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1394 MLDILEQFLNIHGHRYLRLDGSTKIEQRQLLTERFNNDTRILAFILSSRSGGLGINLT-G 1452 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1453 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1507 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1508 MLDDVVIQEGE 1518 >gi|242764399|ref|XP_002340764.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218723960|gb|EED23377.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1045 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 18/159 (11%) Query: 51 VHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDP 98 V K++AL I+ +A IV F L +++ + R ++ Sbjct: 804 VPSTKVRALIRILRKEAPEYKFIVFSVFTQMLDKIEPFLKRAKLGYARYDGSMRNDLREA 863 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + N +L + GLNL + +V +W+ +E + R + Sbjct: 864 SLEKLRNHSNTRILLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FVEEQAIDRVHR 917 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y + +NT++E +L K + + + Sbjct: 918 LNQTIDVKIYKITIKNTVEERILDLQERKRELANATIEG 956 Score = 37.8 bits (86), Expect = 0.98, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 18/46 (39%), Gaps = 4/46 (8%) Query: 1 MKQYHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 ++ Y++ + R L + G ++ ++ ++ Q N Sbjct: 565 VEFYNRLEQRTDRRLSQMMGGSKLDYASALVMLLRLRQACNHPDLV 610 >gi|194228023|ref|XP_001488364.2| PREDICTED: excision repair cross-complementing rodent repair deficiency, complementation group 6-like [Equus caballus] Length = 1230 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 67/245 (27%), Gaps = 55/245 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 + Y KF ++ +E + ++ +L + Sbjct: 365 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACHLLNLGAVKFSVQD 422 Query: 43 -DEEKHWKEVH-------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 +E + +V K+ L ++++ +V L +++ Sbjct: 423 ENEGEDSSDVDHLDKITDDTLMEESGKMIFLMDLLQRLRDEGHQTLVFSQSRQILNIIER 482 Query: 87 AFPQGR-----------TLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 L + I + G GL L +V Sbjct: 483 LLKNRHFKILRIDGTITHLVEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTA-ATRVVI 541 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 542 FDPSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQT 596 Query: 195 LNALK 199 K Sbjct: 597 TGDKK 601 >gi|167628577|ref|YP_001679076.1| helicase (snf2 family) protein [Heliobacterium modesticaldum Ice1] gi|167591317|gb|ABZ83065.1| helicase (snf2 family) protein [Heliobacterium modesticaldum Ice1] Length = 537 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 79/219 (36%), Gaps = 27/219 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 + Y+ + L + + ++ S + ++ + + + Sbjct: 273 ELYNAVIQYLRGEFRRRKKNRKSTLSLLILLREICSSSFAALGTIEQMGLEELVPLARRI 332 Query: 53 --DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTI 101 + K + +++ +I +F + + G T Sbjct: 333 RQNAKGHVVTEFLKQNREKVVIFTEYFQTMDYLSLHLQAAGIPVLVYHGGLGRWTRAMTQ 392 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ + +P+L S G G+NLQ+ + ++ + L W+ +Q I R+ + G Sbjct: 393 HQFQKSDVPVLI-STESGGEGINLQF-CSQVINYDLPWNPMRVEQRIGRV-----HRLGQ 445 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R V VY L + TI+E +L+ L K + + +++ Sbjct: 446 SRDVHVYNLSTRGTIEEQMLRLLSEKIEMFAQTIGPIER 484 >gi|109131186|ref|XP_001092609.1| PREDICTED: DNA excision repair protein ERCC-6-like isoform 2 [Macaca mulatta] Length = 1252 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 67/243 (27%), Gaps = 53/243 (21%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 + Y KF ++ +E + ++ +L + Sbjct: 379 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACCLLNLGTFSAQDGN 436 Query: 43 -----DEEKHWKEV-------HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---- 84 + H ++ K+ L ++++ +V L + Sbjct: 437 EGEDSPDVDHIDQITDNTLMEESGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLL 496 Query: 85 --------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + L+++ + G GL L +V F Sbjct: 497 KNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTA-ATRVVIFD 555 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + V R + G K+ V VY LI T++E + +R K ++ Sbjct: 556 PSWNPAT-----DAQAVDRVYRIGQKQNVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTG 610 Query: 197 ALK 199 K Sbjct: 611 EKK 613 >gi|292630869|sp|B3LN76|RDH54_YEAS1 RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|190408764|gb|EDV12029.1| helicase [Saccharomyces cerevisiae RM11-1a] Length = 924 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 72/213 (33%), Gaps = 34/213 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------------VHDEKIKA 58 L + +S ++ N + ++K ++ K++ Sbjct: 575 ARLDFGRLTFSSSLGLITLLKKVCNSPGLVGSDPYYKSHIKDTQSQDSYSRSLNSGKLRV 634 Query: 59 LEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L ++ K ++V ++ L ++ + + +N Sbjct: 635 LMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFN 694 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I S G GLNL G + L+ F W+ ++ ++R + G K+ Sbjct: 695 RNPAIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPS-----VDLQAMSRIHRDGQKKP 748 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y L+ IDE +LQR K+++ L Sbjct: 749 CFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 781 >gi|302681469|ref|XP_003030416.1| hypothetical protein SCHCODRAFT_58011 [Schizophyllum commune H4-8] gi|300104107|gb|EFI95513.1| hypothetical protein SCHCODRAFT_58011 [Schizophyllum commune H4-8] Length = 1312 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 76/207 (36%), Gaps = 30/207 (14%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEK--ANAAP 70 + + ++ + AN +D + + ++ K+ L+ ++ + + Sbjct: 511 ISLLNIVMELKKAANHPFLFDGAELRSDDNEATLKGLVMNSGKMVLLDKLLARLRQDGHR 570 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIP--LLFAHPAS 118 +++ L L + + + +N P + Sbjct: 571 VLIFSQMVRMLDILSDYMSLRGYIHQRLDGTIASDARKKAMAHFNMPGSPDFAFLLSTRA 630 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL + ++ F W+ + + + R + G K V VY ++++T++E Sbjct: 631 GGLGINL-ETADTVIIFDSDWNPQN-----DLQAMARAHRIGQKSHVSVYRFVSKDTVEE 684 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 +L++ + K ++ ++N + H+ Sbjct: 685 EILEKAKAKMVLEYAIINQMDTTQAHL 711 >gi|307177261|gb|EFN66439.1| DNA repair and recombination protein RAD54B [Camponotus floridanus] Length = 845 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 73/205 (35%), Gaps = 40/205 (19%) Query: 26 ASKTVKCLQLANGAVYYDEEKHW----------------KEVHDEKIKALEVIIE----- 64 S + ++ N + +K ++ + K I++ Sbjct: 546 LSIIIALKKICNHPNLFINDKENTLRETLSKAICTIQLKQDKNFIKYCGKITILQVLMRN 605 Query: 65 -KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN--EGKIPL 111 K +++ ++ L + + I+++N + Sbjct: 606 LKKTDEKLVLVSYYTQTLDLFETICNIEELKFLRLDGTISSSTRSKIIEQFNTRSDNSKI 665 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G GLNL G + LV F W+ + + R + G K+ V++Y L+ Sbjct: 666 LLLSAKAGGVGLNL-PGASRLVLFDSDWNPAS-----DVQAMARIWRDGQKKNVYIYRLL 719 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 TI+E + QR +K+++ + +++ Sbjct: 720 TTGTIEEKIYQRQISKASLSESVVD 744 >gi|195436975|ref|XP_002066420.1| GK18104 [Drosophila willistoni] gi|194162505|gb|EDW77406.1| GK18104 [Drosophila willistoni] Length = 842 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 20/175 (11%) Query: 34 QLANGAVYYD-EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----- 85 QL N YD + V K L+ I+ K +++ F L ++ Sbjct: 627 QLCNKYQLYDVKIPDHLIVDSGKFSYLDKILPKLREEGHRVLLFSQFTMMLDIVEEYLRI 686 Query: 86 -----KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 G + + I ++N + I + + G G+NL + + + + Sbjct: 687 RKHGFCRLDGGTAVKERQDLITDFNVDDNIFVFLLSTKAGGVGINLTA-ADTCIIHDIDF 745 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + ++ R + G R V +Y LI+++TI+E +L K ++ + Sbjct: 746 NP-----YNDKQAEDRCHRMGQMRPVSIYRLISESTIEEGILMAAEEKLKLEKDI 795 >gi|145355576|ref|XP_001422035.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582274|gb|ABP00329.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 589 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 70/198 (35%), Gaps = 30/198 (15%) Query: 28 KTVKCLQLANGA---------VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYH 76 ++ + N K++ L+ ++ + A +++ Sbjct: 318 MLMQLRKNCNHPDLITGGLDGSIMFPSADELVEQCGKMQLLDRLMTRLRARGHKVLIFSQ 377 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 L L+ F Q D I +N + K + + G G+NL Sbjct: 378 MTRMLDLLESFFQQRGEPVCRIDGSVKQDDRREFIARFNEDPKYGIFLLSTRAGGLGINL 437 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 GG+ ++ + W+ + + + R + G + V VY L +++ +L++ Sbjct: 438 T-GGDTVIIYDSDWNPHQ-----DLQAMDRVHRIGQTKPVHVYRLATAKSVEGKMLKKAA 491 Query: 186 TKSTIQDLLL--NALKKE 201 +K ++ L++ K+E Sbjct: 492 SKLALEKLVVTNGGFKQE 509 >gi|190405721|gb|EDV08988.1| chromo domain protein 1 [Saccharomyces cerevisiae RM11-1a] Length = 1436 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 78/228 (34%), Gaps = 39/228 (17%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y L G F+ + + + +N +D + Sbjct: 592 EYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTR 651 Query: 51 --------VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 + K+ L+ ++ K + +++ L L Sbjct: 652 ENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDG 711 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + +I +N + + G G+NL + +V F W+ + Sbjct: 712 TVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA----- 765 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 766 DLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 813 >gi|171687883|ref|XP_001908882.1| hypothetical protein [Podospora anserina S mat+] gi|170943903|emb|CAP69555.1| unnamed protein product [Podospora anserina S mat+] Length = 1700 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 76/227 (33%), Gaps = 36/227 (15%) Query: 1 MKQYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 ++ Y Y L N + + ++ +++N + + + Sbjct: 719 LEYYKNILTRNYAALSDASNGHKQSLLNIMMELKKVSNHPYMFQGAEERVLANGSGRRED 778 Query: 53 --------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 K+ L+ ++ K + +++ L L + Sbjct: 779 AVKGLITSSGKMMLLDQLLAKLKKDGHRVLIFSQMVKMLDILADYLRIRGYQFQRLDGTI 838 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I +N + G G+NL + ++ + W+ + + Sbjct: 839 PAGPRRLAINHFNAEDSDDFCFLLSTRAGGLGINLMT-ADTVIIYDSDWNPQA-----DL 892 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G KR V VY L+A+ TI+E V++R R K ++ L + A Sbjct: 893 QAMARAHRIGQKRPVNVYRLVAKQTIEEEVVKRARNKLFLEYLTIQA 939 >gi|189423365|ref|YP_001950542.1| non-specific serine/threonine protein kinase [Geobacter lovleyi SZ] gi|189419624|gb|ACD94022.1| Non-specific serine/threonine protein kinase [Geobacter lovleyi SZ] Length = 641 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 67/206 (32%), Gaps = 26/206 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + + ++ A + + H K + L Sbjct: 416 EMYEQVR---LAIIEEYGKSAS--LVSLQRLRMFCTHPLLAGFALADPTEHMPKYQRLIE 470 Query: 62 IIEK--ANAAPIIVAYHFN-------SDLARLQKAFPQGRTLDK-----DPCTIQEWN-E 106 ++E+ + ++ + DL++ + + ++ Sbjct: 471 LLEEIFSRREKCLIFTGYTGMTDILMHDLSKRFVDQYFNFIDGRVPVPDRQTIVDAFSIS 530 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 L +P + G GLN+ N ++ ++ W+ E R + R V Sbjct: 531 PTSGALILNPRAAGVGLNITA-ANHVIHYNPEWNPAL-----EDQASARAYRRKQTRPVT 584 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQD 192 V+ L ++++E+V+ RL+ K + + Sbjct: 585 VHQLYFVDSVEEVVVGRLKLKRGLSE 610 >gi|261335089|emb|CBH18083.1| ATP-dependent helicase, putative [Trypanosoma brucei gambiense DAL972] Length = 1211 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 69/170 (40%), Gaps = 20/170 (11%) Query: 40 VYYDEEKHWKEVHD-EKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQK 86 + +HD K++ L+ +++ +++ F L Sbjct: 825 RCFSFPDRHLLIHDCGKLQFLKHCLKQLRREGHRMLIFTQFVHMLNILERFLALIGLPYL 884 Query: 87 AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++ + +N + +I + S G GLNL G + ++F+ W+ Sbjct: 885 RIDGSTQPERRQAYVDWFNEDERITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPT--- 940 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ R + G + V +Y LI+++T++E +LQ+ R + + ++++ Sbjct: 941 --MDLQAQDRCHRIGQTKPVTIYRLISEHTVEESILQKARERKKLNNVVI 988 >gi|189208001|ref|XP_001940334.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976427|gb|EDU43053.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 742 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 59/176 (33%), Gaps = 17/176 (9%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 A+ E + + + + + ++++ IV + S L +QK Sbjct: 556 ASSPSGPACEINDEPLPTKIKALVSDLLKQPKGTKSIVFSFWTSTLDLVQKGLSGSFITY 615 Query: 96 KD-----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + I ++ + GL++ + W+ Sbjct: 616 TRFDGTTSQSNRSTALKDFRQDPSISVILMTISCSAVGLDITA-ASRAYILEPQWNPT-- 672 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +E + R + G + V + +NT +E V++ K + +LLL++ ++ Sbjct: 673 ---VEEQALARVHRMGQTKPVTTIRFVMENTFEERVVETQERKRRLAELLLSSEEQ 725 >gi|157953042|ref|YP_001497934.1| hypothetical protein NY2A_B738L [Paramecium bursaria Chlorella virus NY2A] gi|155123269|gb|ABT15137.1| hypothetical protein NY2A_B738L [Paramecium bursaria Chlorella virus NY2A] Length = 458 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 73/218 (33%), Gaps = 24/218 (11%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWK--EVHDE 54 + Y + L+ G+ + ++ Q + + E + Sbjct: 225 ELYDELVENGRLLLKAYNAYGDGEGRMKLLEQLMRMRQCVTNPQLLFMKSDDERWEGNYT 284 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 K+ L+ I+ I+ ++ ++ ++ ++ ++ + Sbjct: 285 KLNMLKREIQNNPIEKTIIFCNWIHEMISIENMLHSIGYDSVMLNGKTPNEQRDINVKRF 344 Query: 105 N-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N + I S G GLNLQ + + SL W+ E + R + G + Sbjct: 345 NEDDNINFFIVQIESGGIGLNLQ-VASRVFINSLSWNATT-----EIQAIARAHRIGQTK 398 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V V LI NT DE VL + K I + + + E Sbjct: 399 DVTVKRLIINNTFDEYVLNLQQKKLEIASEIFDDKRIE 436 >gi|241951336|ref|XP_002418390.1| TATA-binding protein-associated factor, putative; TBP-associated factor, putative; helicase, putative; modifier of transcription, putative [Candida dubliniensis CD36] gi|223641729|emb|CAX43690.1| TATA-binding protein-associated factor, putative [Candida dubliniensis CD36] Length = 1918 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 15/142 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +K + I+E + + F ++++N + I +L Sbjct: 1695 LKDMLDIVENELLRKYLPSVTFMR--------LDGSTDPRDRQSIVRKFNEDPSIDVLLL 1746 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GLNL G + ++F W+ M + + R + G K+ V VY LI ++ Sbjct: 1747 TTKVGGLGLNLT-GADTVIFVEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRLITKD 1800 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E ++ + K I ++N Sbjct: 1801 TLEEKIMGLQKFKMNIASTIVN 1822 >gi|74025142|ref|XP_829137.1| SNF2 DNA repair protein [Trypanosoma brucei TREU927] gi|70834523|gb|EAN80025.1| SNF2 DNA repair protein, putative [Trypanosoma brucei] Length = 1211 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 69/170 (40%), Gaps = 20/170 (11%) Query: 40 VYYDEEKHWKEVHD-EKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQK 86 + +HD K++ L+ +++ +++ F L Sbjct: 825 RCFSFPDRHLLIHDCGKLQFLKHCLKQLRREGHRMLIFTQFVHMLNILERFLALIGLPYL 884 Query: 87 AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++ + +N + +I + S G GLNL G + ++F+ W+ Sbjct: 885 RIDGSTQPERRQAYVDWFNEDERITCMILSTRSGGIGLNLT-GADTVIFYDSDWNPT--- 940 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ R + G + V +Y LI+++T++E +LQ+ R + + ++++ Sbjct: 941 --MDLQAQDRCHRIGQTKPVTIYRLISEHTVEESILQKARERKKLNNVVI 988 >gi|237737828|ref|ZP_04568309.1| SWF/SNF family helicase [Fusobacterium mortiferum ATCC 9817] gi|229419708|gb|EEO34755.1| SWF/SNF family helicase [Fusobacterium mortiferum ATCC 9817] Length = 913 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 28/213 (13%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + Y + G F + Q+ + E V K Sbjct: 693 KLYEERRNYYYNMVHSQIKENGLGKTQFFILQALNELRQITS-----CPESKSVGVTSSK 747 Query: 56 IKALEVIIEK--ANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQEW 104 + L I N ++V ++ + + ++ G T D+ + Sbjct: 748 REVLINNILDAVENGHKVLVFTNYINSIKNICDDLEKYGIKYLSMSGATKDRQLLVDKFQ 807 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + K + + G GLNL + + + WW+ + +E + R + G R Sbjct: 808 KDNKYKVFVMTLKTGGVGLNLTA-ADTIFIYDPWWN-----KTVENQAIDRAYRLGQDRT 861 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VF Y LI ++TI+E +LQ +K + D L++ Sbjct: 862 VFSYKLILKDTIEEKILQLQESKIKLLDSLISE 894 >gi|322499769|emb|CBZ34843.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1044 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 62/176 (35%), Gaps = 20/176 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP------- 89 A + K++ L+ ++ + A ++ +F + L L+ Sbjct: 589 AAGVPMDAAHLIDPSAKMRYLDTLLPQLKAQGHRCLIFSNFTTTLDLLEAMCHLRGHSYE 648 Query: 90 ---QGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + ++ +N L + G G+ L G + ++ F ++ + Sbjct: 649 RLDGSCNRVERELSMLRYNHPASSCFLFLVTTTAGGVGVTLT-GADTVILFDAHFNPQL- 706 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +R R + G R V VY L Q TI+E + K+ + D ++ ++ Sbjct: 707 ----DRQAADRAHRIGQTRTVHVYRLCLQGTIEEHIRDIAARKAYLGDFIVEGGQR 758 >gi|148709831|gb|EDL41777.1| mCG13925 [Mus musculus] Length = 1372 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 27/212 (12%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 ++ Y F + E + A + ++ K A G V+ Sbjct: 1103 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLK--ATGHVFQLLLDCGLGNGSSTESG 1160 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQEWN 105 E ++ + I++ S L ++ + + +N Sbjct: 1161 TESVVAQ---HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFN 1217 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + I +L G GLNL G + +VF W+ + + R + G KR Sbjct: 1218 NDPSIDVLLLTTHVGGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRV 1271 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY LI + T++E ++ + K I + +++ Sbjct: 1272 VNVYRLITRGTLEEKIMGLQKFKMNIANTVIS 1303 >gi|146089132|ref|XP_001466244.1| helicase [Leishmania infantum JPCM5] gi|134070346|emb|CAM68683.1| putative helicase-like protein [Leishmania infantum JPCM5] Length = 1044 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 62/176 (35%), Gaps = 20/176 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP------- 89 A + K++ L+ ++ + A ++ +F + L L+ Sbjct: 589 AAGVPMDAAHLIDPSAKMRYLDTLLPQLKAQGHRCLIFSNFTTTLDLLEAMCHLRGHSYE 648 Query: 90 ---QGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + ++ +N L + G G+ L G + ++ F ++ + Sbjct: 649 RLDGSCNRVERELSMLRYNHPASSCFLFLVTTTAGGVGVTLT-GADTVILFDAHFNPQL- 706 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +R R + G R V VY L Q TI+E + K+ + D ++ ++ Sbjct: 707 ----DRQAADRAHRIGQTRTVHVYRLCLQGTIEEHIRDIAARKAYLGDFIVEGGQR 758 >gi|322492504|emb|CBZ27779.1| putative helicase-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1044 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 62/176 (35%), Gaps = 20/176 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP------- 89 A + K++ L+ ++ + A ++ +F + L L+ Sbjct: 586 AAGVPMDAAHLIDPSAKMRYLDTLLPQLKAQGHRCLIFSNFTTTLDLLEAMCHLRGHSYE 645 Query: 90 ---QGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + ++ +N L + G G+ L G + ++ F ++ + Sbjct: 646 RLDGSCNRVERELSMLRYNHPASSCFLFLVTTTAGGVGVTLT-GADTVILFDAHFNPQL- 703 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +R R + G R V VY L Q TI+E + K+ + D ++ ++ Sbjct: 704 ----DRQAADRAHRIGQTRTVHVYRLCLQGTIEEHIRDIAARKAYLGDFIVEGGQR 755 >gi|213404262|ref|XP_002172903.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces japonicus yFS275] gi|212000950|gb|EEB06610.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces japonicus yFS275] Length = 1356 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 73/226 (32%), Gaps = 39/226 (17%) Query: 4 YHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 Y Y L + + ++ + +N + + Sbjct: 618 YKNILTRNYRVLSQSTSNGSQLSLLNIVMELKKASNHPYLFPGVEETWLKKTGGEGKREE 677 Query: 53 --------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 K+ L+ ++ + + +++ L L + Sbjct: 678 LLKGLIMNSGKMVLLDKLLTRLHRDGHRVLIFSQMVRMLDILGDYMSLRGYPFQRLDGTV 737 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +I +N P + + G G+NL + ++ F W+ + + Sbjct: 738 PAATRRISIDHFNAPNSPDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DL 791 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++TI+E VL+R R K ++ +++ Sbjct: 792 QAMARAHRIGQKNHVMVYRFLSKDTIEEDVLERARRKMILEYAIIS 837 >gi|145233919|ref|XP_001400332.1| SNF2 family helicase/ATPase [Aspergillus niger CBS 513.88] gi|134057271|emb|CAK37885.1| unnamed protein product [Aspergillus niger] Length = 1123 Score = 87.9 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 19/170 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 ++ K+ + + K+ L ++ K N +V F + L+ Sbjct: 925 HSLGRFALKNNEWMDSGKVDKLCDLLKRFKENGDRALVFSQFTLVMDILEHVLENQHIGF 984 Query: 96 ----------KDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + ++E IP+ + G G+NL N ++ F ++ + Sbjct: 985 VRLDGRTNVEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQ-- 1041 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + R + G R V V L+ + TI+E + +TK + + Sbjct: 1042 ---EDVQAENRAHRVGQTRDVEVIRLVTKGTIEEQIYALGQTKLALDQAV 1088 >gi|325120775|emb|CBZ56330.1| hypothetical protein NCLIV_067550 [Neospora caninum Liverpool] Length = 2638 Score = 87.9 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 78/209 (37%), Gaps = 28/209 (13%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVI 62 QR LY ++G + ++ V+ ++ N + + + K L+V+ Sbjct: 1532 VQRYLYKMIEGNPVGQ----NRMVQLRKICNHPYLFCYSSYTPDESLVRCCGKFAMLDVL 1587 Query: 63 IE--KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE--GK 108 + K +++ L L+ G + ++ + +N+ + Sbjct: 1588 LPALKMGNHRVLIFSQMTKLLDILEVYLSLRGHTYLRLDGGTSSEERQKRLTLYNQEGSE 1647 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NLQ + ++ F W+ + + +R + G K+ V Sbjct: 1648 YFIFILSTKAGGLGVNLQS-ADTVIIFDSDWNPQN-----DEQAQSRAHRIGQKKEVLTL 1701 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+ +I+E +LQR K L++ + Sbjct: 1702 RFISVESIEEQILQRAECKLDRDKLVIQS 1730 >gi|159478845|ref|XP_001697511.1| chromodomain-helicase-DNA-binding protein [Chlamydomonas reinhardtii] gi|158274390|gb|EDP00173.1| chromodomain-helicase-DNA-binding protein [Chlamydomonas reinhardtii] Length = 2000 Score = 87.9 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 25/220 (11%), Positives = 60/220 (27%), Gaps = 57/220 (25%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH----------------------------------D 53 ++ +L V D + ++ Sbjct: 909 LAMELRKLCCHPVLCDGLEDDLKLKLTQQRLAAEAAAAAEGHAPDTEFKCPETEVLVRGS 968 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTI 101 K+ L ++ K A +++ F L L+ + I Sbjct: 969 GKMTLLHKLLPKLRAEGKRVLIFSQFVMMLNVLEDYCTLMGYPVERIDGSIKGRERQQAI 1028 Query: 102 QEWNEGKIP-----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + + G G+ L + + + W+ + + + R Sbjct: 1029 DRFSAADADQDKAFVFLLSTRAGGQGITLTA-ADTCIIYDSDWNPQN-----DLQAMARC 1082 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY LI+ +T + + K + + +L Sbjct: 1083 HRIGQTKEVTVYRLISADTYEMALFSSASRKYGLDEAVLG 1122 >gi|9972383|gb|AAG10633.1|AC022521_11 Similar nucleotide excision repair proteins [Arabidopsis thaliana] Length = 627 Score = 87.9 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 51/145 (35%), Gaps = 17/145 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIP 110 ++E+ +A IV F S L + A + KD E Sbjct: 436 MVERDWSAKAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCR 495 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G LNL + + WW+ +ER R + G + V V Sbjct: 496 VLLMSLQAGGVALNLTA-ASHVFMMDPWWNPA-----VERQAQDRIHRIGQCKPVRVVRF 549 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I + T++E +L + K + + L Sbjct: 550 IMEKTVEEKILTLQKKKEDLFERFL 574 >gi|119177366|ref|XP_001240470.1| hypothetical protein CIMG_07633 [Coccidioides immitis RS] Length = 1142 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + ++ K++ L ++++ N I++ F L + Sbjct: 931 KNDEWMNSGKVEKLCELLKQYTENGDRILIFSQFTMVMDILEQVLETLEIRFFRLDGTTS 990 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + + E +P+ + G G+NL N ++ F ++ ++ + Sbjct: 991 VEDRQSILDAFYEQVDVPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQD-----DIQA 1044 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1045 ENRAHRVGQTREVEVVRLVTKGTIEEQIYALGQTKLALDQRV 1086 >gi|255544141|ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223548144|gb|EEF49636.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 993 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 51/139 (36%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 I+ + S L ++ + Q + ++++N + ++ ++ + Sbjct: 836 KSIIFSQWTSMLDLVEFSLNQHCIQYRRLDGTMTLGARDRAVKDFNTDPEVTVMLMSLKA 895 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E V R + G R V V L ++T+++ Sbjct: 896 GNLGLNMVAACH-VILLDLWWNPTT-----EDQAVDRAHRIGQTRPVTVTRLTIKDTVED 949 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L K + Sbjct: 950 RILALQEEKRRMVASAFGE 968 >gi|70996252|ref|XP_752881.1| dsDNA-dependent ATPase (Rad54b) [Aspergillus fumigatus Af293] gi|66850516|gb|EAL90843.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus fumigatus Af293] Length = 969 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 44/214 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE----------------------KHWKEVHDEKIKA 58 + N+ +L N + +H+ KI+ Sbjct: 567 NSENALQLITILKKLCNSPSLLSPKTGDERPSETITALLSSLPPNLLRHFTPSCSAKIRV 626 Query: 59 LEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ + + I++ ++ S L L K ++++N Sbjct: 627 LDQLLHNLRTSTSEKIVLVSNYTSTLNLLANLLNSLSLPFLRLDGSTPAQKRQALVEDFN 686 Query: 106 E---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL G + LV F + W+ + + R + G K Sbjct: 687 RLPPNRCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DVQAMARIHRDGQK 740 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R +Y ++ + +++E + QR TK + D ++ Sbjct: 741 RHCRIYRILLKGSLEEKIWQRQVTKIGLADSVME 774 >gi|320581787|gb|EFW96006.1| Putative DNA helicase INO80 [Pichia angusta DL-1] Length = 1280 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 61/160 (38%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KD 97 + K+ L+ ++ K N ++ + + +++ + + Sbjct: 1092 IESGKLAKLDEMLVDLKKNGHKCLIYFQMTKMMDLMEEFLTYRQYKYIRLDGSSKLSDRR 1151 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ + + G G+NL + ++F+ W+ I+ + R Sbjct: 1152 DLVHDWQTKPELFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAH 1205 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1206 RLGQTRQVTVYRLLVRGTIEERMRDRAKQKEHVQQVVMEG 1245 >gi|302917785|ref|XP_003052516.1| hypothetical protein NECHADRAFT_105975 [Nectria haematococca mpVI 77-13-4] gi|256733456|gb|EEU46803.1| hypothetical protein NECHADRAFT_105975 [Nectria haematococca mpVI 77-13-4] Length = 915 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 19/176 (10%) Query: 43 DEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ----------G 91 + + + KI+ L I++ + IV F S L ++ F + Sbjct: 707 RDPHSPQVLASSKIRELIKILQAEVKEHKFIVFSQFTSMLDLVEPFFRKERFSFVRYDGS 766 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 D+ +++ + K +L GLNL +V +W+ +E Sbjct: 767 MKNDEREESLRRLRSDPKTRILLCSLKCGSLGLNLTA-ATRVVILEPFWNP-----FVEE 820 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKETIHV 205 + R + V +Y L T++E +L K + + + ++KE + Sbjct: 821 QAIDRVHRLTQTVDVIIYKLTVTKTVEERILDLQEKKRLLAEQAIEGGMRKEGFKL 876 Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats. Identities = 5/44 (11%), Positives = 12/44 (27%), Gaps = 3/44 (6%) Query: 2 KQYHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 K Y + + + N+ + ++ Q N Sbjct: 417 KFYDRLAARADRSIEAMMRGRVNYANALTLLLRLRQACNHPKLV 460 >gi|242015095|ref|XP_002428209.1| Chromo domain protein, putative [Pediculus humanus corporis] gi|212512770|gb|EEB15471.1| Chromo domain protein, putative [Pediculus humanus corporis] Length = 1795 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 69/223 (30%), Gaps = 40/223 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y ++ ++G N + K + + + +E + Sbjct: 685 KNYSALRKG----VKGSTTTFNNIVIELKK----CCNHAFLTKPSETENKSNEADSLQML 736 Query: 62 I--------------IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---------- 97 + K +++ L L + R + Sbjct: 737 LRGSGKLVLLDKLLVRLKETNHRVLIFSQMVRMLDILAEYLQLRRFQFQRLDGSIKGEIR 796 Query: 98 PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + G G+NL + ++ F W+ + + R Sbjct: 797 KQALDHFNAENSMDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQAR 850 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K V +Y L+ +N+++E +++R + K + L++ + Sbjct: 851 AHRIGQKNQVNIYRLVTKNSVEEEIIERAKKKMVLDHLVIQRM 893 >gi|121705194|ref|XP_001270860.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] gi|119399006|gb|EAW09434.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] Length = 1131 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 63/179 (35%), Gaps = 22/179 (12%) Query: 32 CLQLA-NGA--VYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN-------- 78 C L N + K+ + ++ K+ L ++ K N +V F Sbjct: 924 CHSLCINHPNSLGKFALKNDEWMNSGKVDKLCELLKRFKENGDRTLVFSQFTMVMDILEH 983 Query: 79 --SDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFF 135 L ++ + ++E IP+ + G G+NL N +V F Sbjct: 984 VLETLHLEFVRLDGRTNVEDRQSILDAFHERTDIPVFLLSTKAGGAGINL-ACANKVVIF 1042 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ + + R + G + V V L+ ++TI+E + +TK + + Sbjct: 1043 DSSFNPQ-----EDVQAENRAHRVGQTQEVEVIRLVTKDTIEEQIYALGQTKLALDQAV 1096 >gi|225440123|ref|XP_002277489.1| PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Vitis vinifera] Length = 874 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 23/165 (13%) Query: 49 KEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAF----------PQGRTL 94 E K+ L + ++ + +V F L L++ Sbjct: 695 SECTSSKVLTLLKFLSASRDQNPSTKSVVFSQFRKMLLLLEQPLKAAGFKTLRLDGSMNA 754 Query: 95 DKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I+E+ +L A + G G+NL + + WW+ +E Sbjct: 755 KRRAQVIEEFGAPGPNGPTVLLASLKASGAGINLTA-ASRVYLLEPWWNPA-----VEEQ 808 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V + LIA+N+I+E +L+ K + Sbjct: 809 AMDRVHRIGQKEDVKIVRLIARNSIEERILELQERKKKLAKEAFG 853 >gi|255937135|ref|XP_002559594.1| Pc13g11770 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584214|emb|CAP92246.1| Pc13g11770 [Penicillium chrysogenum Wisconsin 54-1255] Length = 834 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 65/193 (33%), Gaps = 28/193 (14%) Query: 33 LQLANGA--VYYDEEKHWKEVH------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 N Y+ V K+ L+ ++ I++ F + L Sbjct: 568 RLACNSPHNFYWPWMDESSSVDESLVSASGKMLLLDRLVACLLKKGHKILIFSQFKTQLD 627 Query: 83 -----------RLQKAFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGN 130 + I+ +N K L + G G+NL + Sbjct: 628 IIEEWATTLRSWDCCRIDGAIAQSERQAQIKNFNTKKSHKLFLLSTRAGGQGINLTA-AD 686 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ F W+ ++ + R + G + V +Y L + T+++ +L++ +K + Sbjct: 687 TVIIFDSDWNPQQ-----DLQAQDRAHRIGQTKPVIIYRLATKGTVEQTLLEKADSKRRL 741 Query: 191 QDLLLNALKKETI 203 + L++ K ++ Sbjct: 742 ERLVIQKGKFRSL 754 >gi|196008607|ref|XP_002114169.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens] gi|190583188|gb|EDV23259.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens] Length = 687 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 62/161 (38%), Gaps = 22/161 (13%) Query: 52 HDEKI----KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 H K+ L+ I + + ++V +F L LQK K Sbjct: 490 HSGKLAVLSNLLDWIYQNSPKEKVVVVSNFTRTLDVLQKMCKSKNYRYVRLDGSTPTSKR 549 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +N + + G GLNL G + LV + + W+ + + R Sbjct: 550 HTIVENFNSSYSKTFVFLLSSKAGGTGLNL-IGASRLVLYDIDWNPAN-----DLQAMAR 603 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR V++Y L+ TI+E + QR K + +++ Sbjct: 604 IWRDGQKRDVYIYRLVTTGTIEEKIFQRQVMKHDLSGAVMD 644 >gi|50289267|ref|XP_447064.1| hypothetical protein [Candida glabrata CBS 138] gi|49526373|emb|CAG59997.1| unnamed protein product [Candida glabrata] Length = 1126 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 65/180 (36%), Gaps = 23/180 (12%) Query: 32 CLQLANGA---VYYDEEKHWKEVHDEK---IKALEVIIEKANAAPIIVAYHFN------- 78 +L + + K+ + ++ K +K L I +++ F Sbjct: 924 LHRLCCNFPNTLGDYQLKNDEWMNSGKVDALKKLLDDIINKKREKVLIFTLFTQVLDILE 983 Query: 79 ---SDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVF 134 S L ++ I ++ + IP+ + G G+NL N ++ Sbjct: 984 KVLSTLNYKFLRLDGSTQVNDRQTMIDKFYDDNTIPIFMLSTRAGGFGINL-VCANHVII 1042 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F ++ + +R R + G + V V LI +++I+E + Q +TK + + Sbjct: 1043 FDQSFNPHD-----DRQAADRAHRVGQTKEVTVTTLITKDSIEEKIFQLAKTKLALDSQV 1097 >gi|255944965|ref|XP_002563250.1| Pc20g07250 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587985|emb|CAP86054.1| Pc20g07250 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1119 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 80/265 (30%), Gaps = 77/265 (29%) Query: 1 MKQYH---KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY---------------- 41 +K Y + R+L D + SA+ +K Q A + Sbjct: 829 VKIYDHEKEQVRQLLADREAGKKTGSKSANILMKLRQAAIHPLLARRHYTNEILQKMAKA 888 Query: 42 ------------------------YDEEKHWKEVHDE---------------KIKALEVI 62 ++ + E + K++ L+ + Sbjct: 889 CLKEDKWSLSDPKIILEELMPYNDFECHQMCVENPNSLGKFKLKNDEWMDSGKVEQLKEL 948 Query: 63 IEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNE-GKI 109 + + N ++ F L ++ + ++E +I Sbjct: 949 LTRFIANGDRTLIFSQFTMVMDILEHVLETLKIEFVRLDGRTNVEDRQSILDAFHERTEI 1008 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P+ + G G+NL N +V F ++ + + R + G R V VY Sbjct: 1009 PVFLLSTKAGGAGINL-ACANRVVIFDSSFNPQ-----EDVQAENRAHRVGQTREVEVYR 1062 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLL 194 L+ ++TI+E + +TK + + Sbjct: 1063 LVTRHTIEEQIYGLGQTKLALDQAV 1087 >gi|327532753|ref|NP_001192192.1| DNA repair and recombination protein RAD54B 3 [Homo sapiens] gi|119612118|gb|EAW91712.1| hCG2009220, isoform CRA_b [Homo sapiens] Length = 726 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 75/249 (30%), Gaps = 57/249 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 ++ Y K LQG + + +L N KE K Sbjct: 372 IELYRKLLNSQVVRFCLQGLLENSPH-LICIGALKKLCNHPCLLFNSIKEKECSSTCDKN 430 Query: 59 LEVIIEK------------------------------------ANAAPIIVAYHFNSDLA 82 E + K +++ ++ L Sbjct: 431 EEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLN 490 Query: 83 RLQKAFPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGN 130 LQ+ + + + + +N + + G GLNL GG+ Sbjct: 491 ILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNL-IGGS 549 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 550 HLILYDIDWNPAT-----DIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGL 604 Query: 191 QDLLLNALK 199 +++ K Sbjct: 605 CGAVVDLTK 613 >gi|320170477|gb|EFW47376.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864] Length = 1345 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 17/143 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 K + +++ L +Q+ T + I ++N + I Sbjct: 647 KQDGHRVLIFSQSTRMLDLIQEVLTYQKYSLIRIDGSVTGHERQHRIDKFNTDDSIFGFL 706 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G G+ L + ++ W+ I+ V R + G R V +Y LI Sbjct: 707 LTTQVGGVGITLTS-ADRVIIVDPSWNPA-----IDTQAVDRAYRIGQTRNVVIYRLITC 760 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 TI+E + R KS ++++ Sbjct: 761 GTIEEKIYCRQVYKSDFSHVMID 783 >gi|149062768|gb|EDM13191.1| similar to TBP-associated factor 172 (TAF-172) (TAF(II)170) (predicted) [Rattus norvegicus] Length = 1372 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 17/207 (8%) Query: 1 MKQYHKFQRELYCDLQGENIE--AFNSASKTVKCL------QLANGAVYYDEEKHWKEVH 52 ++ Y F + E + A + ++ K QL + Sbjct: 1103 VQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQLLLDCGLGNGTSSESGTE 1162 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFN--SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKI 109 + +I + + IV + + + + +N + I Sbjct: 1163 SVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSI 1222 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L G GLNL G + +VF W+ + + R + G KR V VY Sbjct: 1223 DVLLLTTHVGGLGLNLT-GADTVVFVEHDWNPMR-----DLQAMDRAHRIGQKRVVNVYR 1276 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 LI + T++E ++ + K I + +++ Sbjct: 1277 LITRGTLEEKIMGLQKFKMNIANTVIS 1303 >gi|118096755|ref|XP_414277.2| PREDICTED: similar to KIAA0809 protein [Gallus gallus] Length = 1473 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 55/149 (36%), Gaps = 11/149 (7%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR--LQKAFPQGRTLDKDPCTIQEWNEGK---IP 110 + +E + K + + R + + I ++N+ + Sbjct: 759 LSVIEEFLAKRPMPNPPGSDGGVHNWVRNISYYRLDGSTSASERERLINQFNDPSNASVW 818 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G+NL G N +V F W+ + V R + G K+ +Y L Sbjct: 819 LFLLSTRAGCLGVNL-IGANRVVVFDASWNP-----CHDAQAVCRVYRYGQKKPCHIYRL 872 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ T+++ + R +K + D +++ L Sbjct: 873 VSDYTLEKKIYDRQISKQGMSDRVVDDLN 901 >gi|326927740|ref|XP_003210048.1| PREDICTED: helicase ARIP4-like [Meleagris gallopavo] Length = 1470 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 58/148 (39%), Gaps = 10/148 (6%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-DKDPCTIQEWNEGK---IPL 111 + +E + K + ++ + + G T + I ++N+ + L Sbjct: 757 LSVIEEFLAKRPMPSPPGSDGIHNWVRNISYYRLDGSTSASERERLINQFNDPSNASVWL 816 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G+NL G N +V F W+ + V R + G K+ +Y L+ Sbjct: 817 FLLSTRAGCLGVNL-IGANRVVVFDASWNP-----CHDAQAVCRVYRYGQKKPCHIYRLV 870 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALK 199 + T+++ + R +K + D +++ L Sbjct: 871 SDYTLEKKIYDRQISKQGMSDRVVDDLN 898 >gi|221120608|ref|XP_002153791.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 [Hydra magnipapillata] Length = 1665 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 23/221 (10%), Positives = 64/221 (28%), Gaps = 33/221 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE---------------EK 46 K Y + + L + + + ++ + N + + Sbjct: 750 KYYKYILTKNFGALNTRGSQQVSLLNIVMELKKCCNHPYLFSTASLEAPRYANNAYEVKG 809 Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + + + K +++ L L+ + Sbjct: 810 LTEASGKLVLLYKMLKKLKEQGHRVLIFSQMTRVLDLLEDFMEGHGWRYERLDGTITGGI 869 Query: 98 -PCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + + G G+NL + + + W+ + + Sbjct: 870 RQSAIDRFNLPNSEIFSFLLSTRAGGLGINL-ATADTVFIYDSDWNP-----HNDIQAFS 923 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + V +Y + ++T++E + Q + K + L++ Sbjct: 924 RAHRIGQQNKVMIYRFVTKSTVEERITQVAKKKMMLTHLVV 964 >gi|50290775|ref|XP_447820.1| hypothetical protein [Candida glabrata CBS 138] gi|49527131|emb|CAG60769.1| unnamed protein product [Candida glabrata] Length = 844 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 74/217 (34%), Gaps = 35/217 (16%) Query: 12 YCDLQGENIEAFNSASK-------TVKCLQLANGAVYYDEEKHWKEV--------HDEKI 56 + +E N+ +K ++ Q+ + + + E K+ Sbjct: 538 IKQMDDIYMEHLNTFTKNQRLQNMMMQLRQVVDSTLLFFFPYMEPEDITLDYLLASSGKL 597 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEW 104 + L+ + I++ F L L+ G + I E+ Sbjct: 598 QMLQKLAIPLIKKGHKILIFSQFVGMLDLLEDWSELNSFNSLRIDGGVDNESRKEYIDEF 657 Query: 105 NE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ + + G G+NL + ++ F W+ + ++ + R + G Sbjct: 658 NKKGDDHQIFLLSTRAAGLGINLVA-ADTVIIFDSDWNPQ-----VDLQAMDRCHRIGQT 711 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V VY NTI+ ++L R K ++ +++ K Sbjct: 712 KPVIVYRFCCDNTIEHVILTRAVNKRKLERMVIQMGK 748 >gi|255710645|ref|XP_002551606.1| KLTH0A03410p [Lachancea thermotolerans] gi|238932983|emb|CAR21164.1| KLTH0A03410p [Lachancea thermotolerans] Length = 806 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 70/190 (36%), Gaps = 28/190 (14%) Query: 29 TVKCLQLANG------AVYYDEEKHWKEV--HDEKIKALEVIIEK--ANAAPIIVAYHFN 78 ++ Q+ + E + + K++ L+ ++ A +++ F Sbjct: 528 MIQLRQVVDSTLLFFFPFLDPEHLTLEFLLQTSGKLQILQQLVPPLVAKKHKVLIFTQFV 587 Query: 79 SDLARLQKAF----------PQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQ 126 S L ++ + I+ +N+G + G G+NL Sbjct: 588 SMLDLIEDWCELNEIRVCRIDGSMDNEARQEHIERFNDGHDSYDAFLISTRAGGLGINLT 647 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + +V F W+ + ++ + R + G + V VY L NT++ ++L R + Sbjct: 648 A-ADTVVLFDSDWNPQ-----VDLQAMDRTHRIGQTKPVIVYRLCCDNTVEHVILTRAAS 701 Query: 187 KSTIQDLLLN 196 K ++ +++ Sbjct: 702 KRKLEKMVIQ 711 >gi|294658308|ref|XP_002770756.1| DEHA2F06446p [Debaryomyces hansenii CBS767] gi|202953033|emb|CAR66284.1| DEHA2F06446p [Debaryomyces hansenii] Length = 884 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 39/206 (18%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEV------------------HDEKIKALEVIIEK 65 NS + ++ N ++K + + K+ L ++ + Sbjct: 544 NSLTLITLFKKICNSPSLLFQDKLFNSLIENEHDSTIDLTTLSKKTASSKVNILIPLLIE 603 Query: 66 AN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--- 110 N ++ ++ L L+ + + ++N+ + Sbjct: 604 INQIGDKTVLISNYTQTLDLLETILHKLNISFSRLDGSTPNKLRDKLVNDFNKQPVSTNS 663 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + S G GLNL G + L+ F W+ I+ + R + G + VF+Y + Sbjct: 664 VFLLSAKSGGVGLNL-IGASRLILFDNDWNPS-----IDLQAMARIHRDGQTKPVFIYRI 717 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 + IDE + QR K+ + D L+ Sbjct: 718 MTTGCIDEKIFQRQMMKNNLSDKFLD 743 >gi|116195488|ref|XP_001223556.1| hypothetical protein CHGG_04342 [Chaetomium globosum CBS 148.51] gi|88180255|gb|EAQ87723.1| hypothetical protein CHGG_04342 [Chaetomium globosum CBS 148.51] Length = 836 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 66/210 (31%), Gaps = 29/210 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------KHWKEVHDEKIKAL 59 R ++ I + ++ + N + K+ L Sbjct: 545 RAQTLEVAKREIANKKLGNPLLQLRLVCNSPHNFYNPWASGTDLPIDESIVTASGKMLLL 604 Query: 60 EVIIEK--ANAAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPCTIQEWN- 105 + ++ +++ F G + I ++N Sbjct: 605 DRLLPTLFKRGHKVLIFSQFKTQLDILEDYCSELRKWPVCRIDGGVAQEDRRTEIHQFNT 664 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + K+ + + G G+NL + ++ F W+ ++ + R + G R V Sbjct: 665 DPKLKIFLLSTRAGGQGINL-ASADTVILFDSDWNPQQ-----DLQAQDRAHRIGQTRPV 718 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY L + T++E +L K ++ L++ Sbjct: 719 IVYRLATKGTVEEGLLMSADAKRRLEKLVI 748 >gi|58266612|ref|XP_570462.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21] gi|134110952|ref|XP_775940.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258606|gb|EAL21293.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var. neoformans B-3501A] gi|57226695|gb|AAW43155.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 818 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 21/167 (12%) Query: 53 DEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 K LE +++ N I++ + L ++K ++ K Sbjct: 575 SGKFVVLERMLDHINHHTNDKIVLISNATQTLDLMEKLCRSKRYGYLRLDGSMSVPKRSK 634 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++N+ + + + G G+NL G N LV F W+ Q + R Sbjct: 635 IVAQFNQPESKEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPASDQ-----QALARVW 688 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ FVY TI+E + QR K + +++ + H Sbjct: 689 RDGQKKECFVYRFQTTGTIEEKIFQRQCQKQNLSACVVDEAEDTARH 735 >gi|322791142|gb|EFZ15704.1| hypothetical protein SINV_11452 [Solenopsis invicta] Length = 843 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 69/204 (33%), Gaps = 39/204 (19%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN------------------ 67 S + ++ N + EK + + I + N Sbjct: 531 FSIIIALKKICNHPNLFINEKENVLYNALSKTCMSQIKQDNNFNEYCGKVTILQTLLRNL 590 Query: 68 ---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE--GKIPLL 112 +++ ++ L L+ +++N +L Sbjct: 591 KKTDEKLVLVSYYTQTLDLLEIICDMEKLKFLRLDGSTPSSVRLKITEQFNTRTDNSKVL 650 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + LV F W+ Q + RI + G KR V++Y L+ Sbjct: 651 LLSAKAGGVGLNL-PGASRLVLFDSDWNPASDMQAMARIW-----RDGQKRNVYIYRLLT 704 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 TI+E + QR +K+ + + +++ Sbjct: 705 TGTIEEKIYQRQISKANLSESVVD 728 >gi|330936688|ref|XP_003305493.1| hypothetical protein PTT_18347 [Pyrenophora teres f. teres 0-1] gi|311317475|gb|EFQ86421.1| hypothetical protein PTT_18347 [Pyrenophora teres f. teres 0-1] Length = 890 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 71/234 (30%), Gaps = 49/234 (20%) Query: 2 KQYHKFQRE--LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + +I + ++ N K + E ++++ Sbjct: 510 EAYRAILDSPTFRLAMGSSDI----ALQLINVLKKICNSPSLLKSSKDNDDTPSEMLQSI 565 Query: 60 EVII------------------------EKANAAPIIVAYHFNSDLARLQK--------- 86 +I I++ ++ + L +++ Sbjct: 566 LPLIPNNILNSSASSAKLRLLDSLVHRIYTTTEEKIVIVSNYTTTLDMIERLLVSLSYTY 625 Query: 87 -AFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 K ++++N+ S G GLNL G + +V F + W+ Sbjct: 626 LRLDGSTPASKRQALVEKFNKTPKTTSFAFLLSAKSGGVGLNL-IGASRIVLFDIDWNPA 684 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K VY + Q +DE + QR K + + +++ Sbjct: 685 T-----DLQAMARIHRDGQKLPCKVYRFLVQGGLDEKIYQRQIMKMGLANAVVD 733 >gi|294892047|ref|XP_002773868.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] gi|239879072|gb|EER05684.1| chromodomain helicase dna binding protein, putative [Perkinsus marinus ATCC 50983] Length = 459 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 56/172 (32%), Gaps = 30/172 (17%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K+ L+ ++ ++V L ++ + Sbjct: 162 SGKMVFLDKLLPRLMETQQKVLVFSQMTRALDVIEDYLLWKGYKYERLDGNVSGTQRQEA 221 Query: 101 IQEWNEGKIP------------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 I +N+ + + G G+NL N++V + W+ + Sbjct: 222 IDRFNDTSSQSSHGASNKEMPWIFLLSTRAGGVGINLTA-ANVVVIYDSDWNPQNDM--- 277 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G K+ V VY LI +++ +E + K ++ L++ + K Sbjct: 278 --QAQARCHRIGQKKEVKVYRLITRDSYEERMFDVASKKLGLEQALMSGVTK 327 >gi|302915751|ref|XP_003051686.1| SNF2 family chromodomain-helicase DNA-binding protein [Nectria haematococca mpVI 77-13-4] gi|256732625|gb|EEU45973.1| SNF2 family chromodomain-helicase DNA-binding protein [Nectria haematococca mpVI 77-13-4] Length = 1557 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 73/223 (32%), Gaps = 35/223 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSA-SKTVKCLQLANGAVYYDEEKHWKEV----------- 51 Y Y L NS + ++ +++N + + Sbjct: 704 YKNILTRNYTALCDATNGHKNSLLNIMMELKKISNHPYMFPGAEEKVLAGSVRREDQIKG 763 Query: 52 ---HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K + +++ L L + Sbjct: 764 LIASSGKMMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYLSLRGYKFQRLDGTIAAGP 823 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + G G+NL + +V F W+ + + + Sbjct: 824 RRMAINHFNADDSDDFCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA-----DLQAMA 877 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V +Y L+++ T++E VL+R R K ++ L + A Sbjct: 878 RAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTIQA 920 >gi|255718763|ref|XP_002555662.1| KLTH0G14498p [Lachancea thermotolerans] gi|238937046|emb|CAR25225.1| KLTH0G14498p [Lachancea thermotolerans] Length = 1436 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 76/226 (33%), Gaps = 39/226 (17%) Query: 4 YHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------------ 50 Y + Y L G F+ + + + +N +D + Sbjct: 607 YKNILTKNYSALSAGSKGAHFSLLNIMNELKKASNHPYLFDMAEDRVLAKFGDGKMSREN 666 Query: 51 ------VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 + K+ L+ ++ K + +++ L L + Sbjct: 667 ILRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLNIKGVNYQRLDGTV 726 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +I +N + + G G+NL + ++ F W+ + + Sbjct: 727 PSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DL 780 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E VL+R R K ++ +++ Sbjct: 781 QAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 826 >gi|242778005|ref|XP_002479148.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus ATCC 10500] gi|218722767|gb|EED22185.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus ATCC 10500] Length = 1037 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 70/215 (32%), Gaps = 44/215 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----------------------EKIKA 58 + S +L N + + + + KI+ Sbjct: 594 NTEGAFSLLTILKKLCNSPSLLNAKTDDEPQNSTVATLLSTLSPSLRRQFSPSSSGKIRV 653 Query: 59 LEVIIEK---ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 L+ ++ + + I++ ++ S L K + ++N Sbjct: 654 LDQLLHNLRTSTSEKIVIVSNYTSTLNLLGVLLTSLSLPFLRLDGSTPSSKRQSLVDDFN 713 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G GLNL G + LV + + W+ + + R + G K Sbjct: 714 RAPASTCFAFLLSAKAGGTGLNLT-GASRLVLYDVDWNPAT-----DLQAMARIHRDGQK 767 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R ++Y ++ + ++E + QR TK + D ++ + Sbjct: 768 RHCYIYRIMLKGALEEKIWQRQVTKIGLADSVMES 802 >gi|195577949|ref|XP_002078829.1| GD22327 [Drosophila simulans] gi|194190838|gb|EDX04414.1| GD22327 [Drosophila simulans] Length = 847 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 20/183 (10%) Query: 34 QLAN-GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----- 85 Q+ N Y + K + L+ ++ K +++ F L ++ Sbjct: 634 QMMNKHEFYDVKIPDNLICDSGKFRYLDTLLPKLKEEGHRVLLFSQFTMMLDIVEEYLRI 693 Query: 86 -----KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ++ I ++N + I + + G G+NL ++ + + Sbjct: 694 RKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIH-DIDF 752 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++ R + G +R V +Y LI+++TI+E +L K ++ + + K Sbjct: 753 NP-----YNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEK 807 Query: 200 KET 202 E Sbjct: 808 GEV 810 >gi|195377834|ref|XP_002047692.1| GJ11780 [Drosophila virilis] gi|194154850|gb|EDW70034.1| GJ11780 [Drosophila virilis] Length = 1679 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 70/230 (30%), Gaps = 41/230 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1061 LYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGH 1120 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 1121 GVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLSWRQFGYLRLD 1180 Query: 91 -GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++++N + + G GLNLQ + +V F W+ + Sbjct: 1181 GTTKAEDRGELLRKFNAKGSDYFVFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQ---- 1235 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1236 -DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1284 >gi|75759628|ref|ZP_00739713.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492873|gb|EAO56004.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 168 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 55/158 (34%), Gaps = 16/158 (10%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 K + + I++ L+ + Sbjct: 2 NKRLEILEECRQXTGKRILIDSPLTKMLSIIGRELNRQAIPYFYLDGSTPAQERVELCDR 61 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +NEG+ L + G GLNL G + ++ + LWW+ Q R + G K Sbjct: 62 FNEGEGELFLISLKAGGTGLNLT-GADTVILYDLWWNPAVEQ-----QAADRAYRMGQKN 115 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V V L+AQ TI+E + + +K + ++ +++ Sbjct: 116 TVQVIKLVAQGTIEEKMHELQESKKNLIAEVIEPGEEK 153 >gi|126342880|ref|XP_001372665.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 1189 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 66/243 (27%), Gaps = 53/243 (21%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-------------------- 41 + Y KF ++ IE + ++ +L + Sbjct: 380 EIYRKFV--SLNHIKQLMIETRSPLAELNVLKKLCDHPRLLSARVCSLLGLKGSSLSGGD 437 Query: 42 -----YDEEKHWKEVH------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK-- 86 + + + + H K+ L +++ + +V L ++ Sbjct: 438 ESQLVHSDIQMDQIPHDSLMQESGKVIFLMALLKRLQDEGHQTLVFSQSRKLLDIIEHLL 497 Query: 87 ----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++ + + G GL L +V F Sbjct: 498 KAEHFKTLRIDGTVTHLSERQRRIDLFQQSRGVSVFLLTSQVGGVGLTLTA-ATRVVIFD 556 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 557 PSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLVRQTTG 611 Query: 197 ALK 199 K Sbjct: 612 DKK 614 >gi|294949971|ref|XP_002786396.1| DNA repair protein Rad54, putative [Perkinsus marinus ATCC 50983] gi|239900688|gb|EER18192.1| DNA repair protein Rad54, putative [Perkinsus marinus ATCC 50983] Length = 756 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 8/123 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 + + K + +N+ K + + G GLNL GGN LV Sbjct: 538 MCQEQQWPVIRLDGSIGVKKRHSLVSTFNDPKADAFVFLLSSKAGGCGLNL-IGGNRLVM 596 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ +R + R + G + ++Y L++ TI+E + QR K ++ +L+ Sbjct: 597 FDPDWNPAN-----DRQAMARIWRDGQTKVCWIYRLLSTGTIEEKIYQRQMKKDSLSELV 651 Query: 195 LNA 197 + Sbjct: 652 VQE 654 >gi|46125449|ref|XP_387278.1| hypothetical protein FG07102.1 [Gibberella zeae PH-1] Length = 1627 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 73/223 (32%), Gaps = 35/223 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSA-SKTVKCLQLANGAVYYDEEKHWKEV----------- 51 Y Y L NS + ++ +++N + + Sbjct: 698 YKNILTRNYSALCDATNGHKNSLLNIMMELKKISNHPYMFPGAEEKVLAGSVRREDQIKG 757 Query: 52 ---HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K N +++ L L + Sbjct: 758 LIASSGKMMLLDQLLSKLNKDGHRVLIFSQMVKMLDILGDYCSLRGYKFQRLDGTIAAGP 817 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + G G+NL + ++ F W+ + + + Sbjct: 818 RRMAINHFNADDSDDFCFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQAMA 871 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V +Y L+++ T++E VL+R R K ++ L + A Sbjct: 872 RAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTIQA 914 >gi|290878090|emb|CBK39149.1| Rdh54p [Saccharomyces cerevisiae EC1118] Length = 924 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 34/213 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------------VHDEKIKA 58 L + +S ++ N + ++K ++ K+K Sbjct: 575 ARLDFGQLTFSSSLGLITLLKKVCNSPGLVGSDPYYKSHIKDTQSQDSYSRSLNSGKLKV 634 Query: 59 LEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L ++ K ++V ++ L ++ + + +N Sbjct: 635 LMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFN 694 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I S G GLNL G + L+ F W+ ++ ++R + G K+ Sbjct: 695 RNPAIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPS-----VDLQAMSRIHRDGQKKP 748 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y L+ IDE +LQR K+++ L Sbjct: 749 CFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 781 >gi|159131635|gb|EDP56748.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus fumigatus A1163] Length = 969 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 44/214 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE----------------------KHWKEVHDEKIKA 58 + N+ +L N + +H+ KI+ Sbjct: 567 NSENALQLITILKKLCNSPSLLSPKTGDERPSETITALLSSLPPNLLRHFTPSCSAKIRL 626 Query: 59 LEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ + + I++ ++ S L L K ++++N Sbjct: 627 LDQLLHNLRTSTSEKIVLVSNYTSTLNLLANLLNSLSLPFLRLDGSTPAQKRQALVEDFN 686 Query: 106 E---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL G + LV F + W+ + + R + G K Sbjct: 687 RLPPNRCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DVQAMARIHRDGQK 740 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R +Y ++ + +++E + QR TK + D ++ Sbjct: 741 RHCRIYRILLKGSLEEKIWQRQVTKIGLADSVME 774 >gi|255720811|ref|XP_002545340.1| hypothetical protein CTRG_00121 [Candida tropicalis MYA-3404] gi|240135829|gb|EER35382.1| hypothetical protein CTRG_00121 [Candida tropicalis MYA-3404] Length = 1162 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 61/172 (35%), Gaps = 20/172 (11%) Query: 46 KHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFN----------SDLARLQKAFPQG 91 + KI+ II++ + IIV F + Sbjct: 971 RDNGFEPSAKIQKCIEIIQEITQANSNEKIIVFSQFTTLFDLLKLVLHYQKIPFLRYDGT 1030 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ I+E+ + +L S GL L N ++ +W+ +E Sbjct: 1031 MNMESKNTVIKEFYKSDTRVLLLSLRSGNAGLTLT-CANHIIIMDPFWNP-----YVEDQ 1084 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R + G +R V V+ ++ + T++ +++ K + L+ K ++I Sbjct: 1085 AMGRAHRIGQEREVHVHRVLIEGTVESRIMELQEHKKELIGEALDESKMKSI 1136 >gi|302682057|ref|XP_003030710.1| hypothetical protein SCHCODRAFT_57400 [Schizophyllum commune H4-8] gi|300104401|gb|EFI95807.1| hypothetical protein SCHCODRAFT_57400 [Schizophyllum commune H4-8] Length = 700 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 30/256 (11%), Positives = 81/256 (31%), Gaps = 68/256 (26%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------------------- 42 Y +F + ++ A+ ++ ++ N + Sbjct: 354 LYDEFMSRAQTQAELQSGVYQKIANILMQLRKVCNHPDLFEVRPIVTSFAMSRSAIADYE 413 Query: 43 -----------------------------DEEKHWKEVHDEKIKALEVIIEKAN--AAPI 71 + + K++ L ++ + + Sbjct: 414 IKELLGAILRLPPDFDSSLHRAAVKLQIAFPDPFLLQFDCGKLQYLADLLREKKAGGHRV 473 Query: 72 IVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 ++ L L+ ++ + +N + ++ A S G Sbjct: 474 LIFTQMTRILDILEVFLNFHGYLYLRLDGATKIEDRQYVTERFNADDRVFCFIASSRSGG 533 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL G + +VF+ ++ + ++R R + G R V +Y ++Q+T++E + Sbjct: 534 VGINLT-GADTVVFYDSDFNPQ-----MDRQCEDRAHRIGQIRDVHIYRFVSQHTVEEAM 587 Query: 181 LQRLRTKSTIQDLLLN 196 L++ K ++ L++ Sbjct: 588 LRKANQKRSLDSLVIQ 603 >gi|198437252|ref|XP_002124935.1| PREDICTED: similar to transcription termination factor, RNA polymerase II [Ciona intestinalis] Length = 1071 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 68/241 (28%), Gaps = 65/241 (26%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------------------------ 51 + + + A ++ Q + + + Sbjct: 817 EKKKMSATTLLVMLLRLRQCCGHLHLLQDTFDPELLQKEKEEIAVEDLFQSMNIGASASS 876 Query: 52 -------------------HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKA- 87 KI + ++ + ++ + S L L Sbjct: 877 FSSDKYSDKSKAKYFEISQPSSKITFVMDTLKKLSVEKPDDKCVIISQWTSMLNILAHHL 936 Query: 88 ---------FPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFS 136 K + +N+ + ++ + G GLNL GGN L Sbjct: 937 AAAKFSYAVIDGSVNARKRMELVDNFNKNPVKPKIMLISLQAGGVGLNL-IGGNHLFLLD 995 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + W+ E+ R + G K+ VFV+ I + T++E +LQ K +I ++ Sbjct: 996 MHWNPAL-----EKQAFDRIYRVGQKKEVFVHKFIMEETVEEQILQLQERKLSIAKAVME 1050 Query: 197 A 197 Sbjct: 1051 G 1051 >gi|193204424|ref|NP_496802.2| BTAF (TBP-associated factor) homolog family member (btf-1) [Caenorhabditis elegans] gi|169402775|emb|CAB02491.2| C. elegans protein F15D4.1, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|169402879|emb|CAB04949.2| C. elegans protein F15D4.1, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|169402880|emb|CAQ16159.1| C. elegans protein F15D4.1, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1649 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 70/219 (31%), Gaps = 31/219 (14%) Query: 6 KFQRELYCDLQGENIEAFNSAS----KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K + + + + K QL E + K +E + ++ Sbjct: 1380 KLVHDTLAKIGAPQYILSKALAAKSGKMEALKQL------LIECEICKNPDEEVEQPEDL 1433 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGR--------------TLDKDPCTIQEWN-E 106 A+ ++ + + + A G + +N + Sbjct: 1434 GGLVASGHRALIFCQWKTSAKLVSDALKSGEFGSVVSHLVLDGSVPAGDRMKMVNRFNED 1493 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I +L G GLNL G + ++F W+ M + + R + G R V Sbjct: 1494 KTIDVLILTTHVGGVGLNLT-GADTVIFLDHDWNP-----MKDLQAIDRAHRLGQTRNVN 1547 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 VY LI Q T++E V+ + K L+ A + + Sbjct: 1548 VYRLITQGTVEEKVMSLAKFKLNTAQALIGADNTSMMTM 1586 >gi|242822858|ref|XP_002487973.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218712894|gb|EED12319.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1086 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 19/165 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR---------LQKAFPQGRTL 94 K+ + ++ KI L ++ K N ++ F + ++ GRT Sbjct: 903 KNQEWMNSGKIDKLCELLKKFKENGDRTLIFSQFTLVMDILEYVLETVNMRFFRLDGRTN 962 Query: 95 DKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +D I + + IP+ + G G+NL N ++ F ++ + + Sbjct: 963 VEDRQAILDAFYEQTDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDVQA 1016 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V V L+ + TI+E + +TK + ++ Sbjct: 1017 ENRAHRVGQTREVEVIRLVTKGTIEEQIYALGQTKLALDQRVVGD 1061 >gi|71033369|ref|XP_766326.1| DNA repair protein Rad54 [Theileria parva strain Muguga] gi|68353283|gb|EAN34043.1| DNA repair protein rad54, putative [Theileria parva] Length = 786 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 69/232 (29%), Gaps = 46/232 (19%) Query: 3 QYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---- 56 Y F R + + + + S ++L N +V + Sbjct: 395 IYKSFVTSRRWKNIMNQDTV-VSRALSAIQSLMKLCNHPFLLKRGGSSPDVDSLLLDIEN 453 Query: 57 ---------------------KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 L I + +++ ++ L ++ + Sbjct: 454 ATKSSKYKCCRCDLSGKFLVLYRLLYQIRRHGNDRVVIISNYTQTLDLFERLCKECNYPF 513 Query: 96 ----------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K + +N+ + + G G+NL G N LV F W+ Sbjct: 514 ERLDGTTSIKKRHKLVTTFNDPNSNSFIFLLSSKAGGCGINL-IGANRLVLFDPDWNPAN 572 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ + R + G + ++Y + TI+E + QR K + +L+ Sbjct: 573 -----DKQALARVWRDGQTKVCYIYRFFSTGTIEEKIYQRQICKDGLSSMLV 619 >gi|326481296|gb|EGE05306.1| serine/threonine protein kinase [Trichophyton equinum CBS 127.97] Length = 1690 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1334 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQAGGHRALIFTQMTK 1377 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1378 MLDILEQFLNIHGHRYLRLDGSTKIEQRQLLTERFNNDTRILAFILSSRSGGLGINLT-G 1436 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1437 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1491 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1492 MLDDVVIQEGE 1502 >gi|193785791|dbj|BAG51226.1| unnamed protein product [Homo sapiens] Length = 793 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + I +N+ L + G+NL G N +V F Sbjct: 104 RNISYFRLDGSTPAFERERLINRFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 162 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ ++Y L+A T+++ + R +K + D +++ Sbjct: 163 SWNP-----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 217 Query: 198 LK 199 L Sbjct: 218 LN 219 >gi|292630874|sp|C7GQI8|RDH54_YEAS2 RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|256271911|gb|EEU06936.1| Rdh54p [Saccharomyces cerevisiae JAY291] Length = 924 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 34/213 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------------VHDEKIKA 58 L + +S ++ N + ++K ++ K+K Sbjct: 575 ARLDFGQLTFSSSLGLITLLKKVCNSPGLVGSDPYYKSHIKDTQSQDSYSRSLNSGKLKV 634 Query: 59 LEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L ++ K ++V ++ L ++ + + +N Sbjct: 635 LMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFN 694 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I S G GLNL G + L+ F W+ ++ ++R + G K+ Sbjct: 695 RNPAIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPS-----VDLQAMSRIHRDGQKKP 748 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y L+ IDE +LQR K+++ L Sbjct: 749 CFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 781 >gi|323447794|gb|EGB03704.1| hypothetical protein AURANDRAFT_5295 [Aureococcus anophagefferens] Length = 154 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 56/156 (35%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCT 100 K+ L+ ++ + + ++V F L + + + Sbjct: 5 SGKMVFLDKLLPRLRSEGRKVLVFSQFVRVLGLVAELCAHRGYDAEALTGATPAADRQRA 64 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N + + G G+NL + +V + W+ + + + R + Sbjct: 65 IDRFNASPDAFVFLLSTRAGGVGINLCA-ADTVVIYDSDWNPQN-----DVQAMARCHRL 118 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G R V VY L+A+ + + +L+ K ++ ++ Sbjct: 119 GQTRDVAVYRLVARKSFEGHMLEAAARKLGLERAVM 154 >gi|326431300|gb|EGD76870.1| BTAF1 protein [Salpingoeca sp. ATCC 50818] Length = 1863 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 33/247 (13%), Positives = 73/247 (29%), Gaps = 58/247 (23%) Query: 2 KQYHKFQRELYCDLQGENIEA----------FNSASKTVKCLQLANGAVYY--------- 42 + Y F + + + A + ++ + + Sbjct: 1544 RMYESFGQTSQAQAAKDVVRAGHDSGDRKGGKHIFQALNFLKRVCSHPLMVKADDVDAKV 1603 Query: 43 ------DEEKHWKEVHDEKIKALEVIIEKAN-------------AAPIIVAYHF------ 77 H K+ AL ++ + + ++ Sbjct: 1604 RAHIAQHGINLHDVHHATKLAALHQLLSDCSIGVSADATAAAASSHRALIFATHKQLLSL 1663 Query: 78 -------NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 A + + E+N + + +L + G GLNL G Sbjct: 1664 VARDLFDRHMPALTYRRLDGDTPTHMRAEVVAEFNDDPTVDVLLLTTSVGGLGLNLT-GA 1722 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F W+ M + + R + G R V VY LI +NT++E ++ R K Sbjct: 1723 DTVIFLEHDWNP-----MKDLQAMDRAHRIGQGRTVNVYRLITRNTLEEKIMNLQRFKLN 1777 Query: 190 IQDLLLN 196 + + +++ Sbjct: 1778 MANTIVS 1784 >gi|123503388|ref|XP_001328501.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gi|121911445|gb|EAY16278.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] Length = 1247 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 68/234 (29%), Gaps = 40/234 (17%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 K Y++ F R L+G + N ++ ++ N + K Sbjct: 410 KYYYRSVFTRNTVFLLRGTEKKTPNFLMNITMELRKVCNHPYLIQGAEENIMRDLNKTGE 469 Query: 59 LEVI-------------------IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---- 95 ++ I +++ F L +Q Sbjct: 470 IKTIQDGLIRSCGKMILLDKLLDRLLPEGHRVLIFSQFTLILDIIQDYLNLKGIKYVRLD 529 Query: 96 ------KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + I ++ IP+ + G G+NL + ++ + W+ + Sbjct: 530 GNVRGPERQAAIDNFSRDGSDIPIFLLTTRAGGQGINLTA-ADTVIIYDSDWNPQN---- 584 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G ++V VY + N+ + + K + +L KE Sbjct: 585 -DIQATARCHRIGQTKSVKVYRFLTSNSYERSMFDIASRKLGLDHAVLEGSSKE 637 >gi|16198155|gb|AAL13882.1| LD35434p [Drosophila melanogaster] Length = 1207 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 67/179 (37%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP 89 + + + + K++ ++ ++ + N +++ L L+ Sbjct: 797 LHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLN 856 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ +N + +I S G G+NL G + ++F+ Sbjct: 857 YHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLT-GADTVIFYDSD 915 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ ++ R + G R V +Y L+++ TI+ +L++ K + D+ + Sbjct: 916 WNPT-----MDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEG 969 >gi|331222641|ref|XP_003323994.1| Chd3-PA [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309302984|gb|EFP79575.1| Chd3-PA [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1668 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 67/214 (31%), Gaps = 31/214 (14%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIE 64 + + + ++ + YD E V K+ L I Sbjct: 935 KQKKSTRAGFQNLLMQLRKTLGHPYLYDPEIEPSNVPEAQVQENLVEASAKLIFLRKFIP 994 Query: 65 K--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN--EGKIP 110 K A +++ F L + I +N Sbjct: 995 KLLARGHRMLIFSQFTMFLDVMERFLDGENMDYLRLDGNTSQLDRQTRIDHFNRKNSNYN 1054 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL ++++ W+ + ++R + G K+ V V+ L Sbjct: 1055 IFLLSTRAGGAGINL-ATADVVIVLDPDWNP-----HNDLQAISRAHRFGQKKPVSVFKL 1108 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + + + +E ++Q + K + L++ +E I Sbjct: 1109 MVKGSAEEKIVQTGKRKLVLDHLVIQKASEEEIE 1142 >gi|194859366|ref|XP_001969360.1| GG23998 [Drosophila erecta] gi|190661227|gb|EDV58419.1| GG23998 [Drosophila erecta] Length = 847 Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 20/183 (10%) Query: 34 QLAN-GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----- 85 Q+ N Y + K + L+ ++ K +++ F L ++ Sbjct: 634 QMMNKHEFYDVKIPDNLICDSGKFRYLDTLLPKLKEEGHRVLLFSQFTMMLDIVEEYLRI 693 Query: 86 -----KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ++ I ++N + I + + G G+NL ++ + + Sbjct: 694 RKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIH-DIDF 752 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++ R + G +R V +Y LI+++TI+E +L K ++ + + K Sbjct: 753 NP-----YNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEK 807 Query: 200 KET 202 E Sbjct: 808 GEV 810 >gi|326476006|gb|EGE00016.1| serine/threonine protein kinase [Trichophyton tonsurans CBS 112818] Length = 1690 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1334 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQAGGHRALIFTQMTK 1377 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1378 MLDILEQFLNIHGHRYLRLDGSTKIEQRQLLTERFNNDTRILAFILSSRSGGLGINLT-G 1436 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1437 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1491 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1492 MLDDVVIQEGE 1502 >gi|312190395|gb|ADQ43195.1| unknown [Eutrema parvulum] Length = 763 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 68/182 (37%), Gaps = 22/182 (12%) Query: 31 KCLQLANGAVYYDEEKHWKEVH---DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ 85 + QL D + + H K + L ++ K + +++ + S L L+ Sbjct: 564 RIHQLLFQYAVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILE 623 Query: 86 KAFPQGRTLDKD---------PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFF 135 + + +N K I + G GLNL G + ++ Sbjct: 624 WTLDVIGVTYRRLDGTQVTDRQTIVDTFNNDKSIFACLLSTRAGGQGLNLT-GADTVIIH 682 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ + I+R R + G + V ++ L+ ++T+DE + + + K + +L Sbjct: 683 DMDFNPQ-----IDRQAEDRCHRIGQTKPVTIF-LVTKSTVDENIYEIAKRKLVLDAAVL 736 Query: 196 NA 197 + Sbjct: 737 ES 738 >gi|260941370|ref|XP_002614851.1| hypothetical protein CLUG_04866 [Clavispora lusitaniae ATCC 42720] gi|238851274|gb|EEQ40738.1| hypothetical protein CLUG_04866 [Clavispora lusitaniae ATCC 42720] Length = 885 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 34/205 (16%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEK------HWKEVHDEKIK-----------ALEVII 63 E + S + ++ N + H E+ + ++ Sbjct: 582 ETKDVLSMILMFRKICNSPSLLHNDPLFASFLHDTELSSSPLSSRTTGSKVNVLVPLLLE 641 Query: 64 EKANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + +++ ++ L + + +D + + Sbjct: 642 FRTVGEKVVLVSNYAQTLDFLETVLSKLNLQYCRLDGSTPAKVRDKLVLDFNKCPTHKIF 701 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + L+ F W+ ++ + R + G + VF+Y L Sbjct: 702 LLSAKAGGVGLNL-VGASRLILFDNDWNPS-----VDLQAMARVHRYGQTKPVFIYRLFT 755 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 IDE + QR K+ + D+ L+ Sbjct: 756 TGAIDEKIFQRQLMKNNLSDMFLDE 780 >gi|118343651|ref|NP_001071646.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] gi|28975391|gb|AAO61781.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] gi|28975393|gb|AAO61782.1| chromo-helicase DNA-binding protein [Taeniopygia guttata] Length = 1786 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + Sbjct: 705 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQH 764 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 765 LIRSSGKLILLDKLLIRLRECGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 824 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 825 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 878 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 879 RAHRIGQKKQVNIYRLVTKASVEEDILERAKKKMVLDHLVIQRM 922 >gi|67517153|ref|XP_658459.1| hypothetical protein AN0855.2 [Aspergillus nidulans FGSC A4] gi|40746529|gb|EAA65685.1| hypothetical protein AN0855.2 [Aspergillus nidulans FGSC A4] gi|259488860|tpe|CBF88651.1| TPA: DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1011 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 75/233 (32%), Gaps = 46/233 (19%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------------- 45 K Y QG + ++ +L N + Sbjct: 559 KIYQNVLASPV--FQGALGNSESALQLITILKKLCNSPSLLSLKDANEKPSETIAAILSS 616 Query: 46 ------KHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQ------ 90 +H+ KI+ L+ ++ + + +++ ++ S L L Sbjct: 617 LPPNLLRHFSPSCSAKIRVLDQLLHYLRTSTSEKVVLVSNYTSTLDLLANLLSSLSLPFL 676 Query: 91 ----GRTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K ++++N + G GLNL G + LV F + W+ Sbjct: 677 RLDGSTPAQKRQSLVEDFNRHPASTCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT 735 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K +Y ++ Q +++E + QR TK + D ++ Sbjct: 736 -----DIQAMARIHRDGQKHHCHIYRILLQGSLEEKIWQRQVTKIGLADSVME 783 >gi|24583161|ref|NP_609320.2| CG5899, isoform A [Drosophila melanogaster] gi|7297570|gb|AAF52824.1| CG5899, isoform A [Drosophila melanogaster] Length = 844 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 67/183 (36%), Gaps = 20/183 (10%) Query: 34 QLAN-GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----- 85 Q+ N Y + K L+ ++ K A +++ F L ++ Sbjct: 631 QMMNKHEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRI 690 Query: 86 -----KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ++ I ++N + I + + G G+NL ++ + + Sbjct: 691 RKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIH-DIDF 749 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++ R + G +R V +Y LI+++TI+E +L K ++ + + K Sbjct: 750 NP-----YNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEK 804 Query: 200 KET 202 E Sbjct: 805 GEV 807 >gi|221488861|gb|EEE27075.1| helicase, putative [Toxoplasma gondii GT1] Length = 1168 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 60/176 (34%), Gaps = 23/176 (13%) Query: 33 LQLANGAVYYDEEKHWKEV--HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---- 84 Q++ G KE+ KI+ + ++ + ++ + + L + Sbjct: 966 QQISQGDSRLAHLSLPKEMIMDSAKIRKMIELVSEIKKKGEKALIFSQYTTYLDVVEESL 1025 Query: 85 --------QKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + ++ + ++ + + + G GLNL ++ Sbjct: 1026 TTFCGDIGKCRLDGSTAVEDRQALVDDFSTNPDLTIFLLSTKAGGQGLNLTA-ARTVILM 1084 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 W+ + +R R + G + V +Y L + T++E +L+ + K + Sbjct: 1085 DQDWNPQN-----DRQAEDRVHRLGQTQDVTIYRLCCRGTVEESILKCCQAKLDLD 1135 >gi|237837185|ref|XP_002367890.1| SNF2 family helicase, putative [Toxoplasma gondii ME49] gi|211965554|gb|EEB00750.1| SNF2 family helicase, putative [Toxoplasma gondii ME49] gi|221509350|gb|EEE34919.1| helicase, putative [Toxoplasma gondii VEG] Length = 1167 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 60/176 (34%), Gaps = 23/176 (13%) Query: 33 LQLANGAVYYDEEKHWKEV--HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL---- 84 Q++ G KE+ KI+ + ++ + ++ + + L + Sbjct: 965 QQISQGDSRLAHLSLPKEMIMDSAKIRKMIELVSEIKKKGEKALIFSQYTTYLDVVEESL 1024 Query: 85 --------QKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + ++ + ++ + + + G GLNL ++ Sbjct: 1025 TTFCGDIGKCRLDGSTAVEDRQALVDDFSTNPDLTIFLLSTKAGGQGLNLTA-ARTVILM 1083 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 W+ + +R R + G + V +Y L + T++E +L+ + K + Sbjct: 1084 DQDWNPQN-----DRQAEDRVHRLGQTQDVTIYRLCCRGTVEESILKCCQAKLDLD 1134 >gi|85724914|ref|NP_001033890.1| CG5899, isoform C [Drosophila melanogaster] gi|84795289|gb|ABC65886.1| CG5899, isoform C [Drosophila melanogaster] Length = 831 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 67/183 (36%), Gaps = 20/183 (10%) Query: 34 QLAN-GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----- 85 Q+ N Y + K L+ ++ K A +++ F L ++ Sbjct: 618 QMMNKHEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRI 677 Query: 86 -----KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ++ I ++N + I + + G G+NL ++ + + Sbjct: 678 RKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIH-DIDF 736 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++ R + G +R V +Y LI+++TI+E +L K ++ + + K Sbjct: 737 NP-----YNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEK 791 Query: 200 KET 202 E Sbjct: 792 GEV 794 >gi|50308703|ref|XP_454355.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74690158|sp|Q6CNY4|INO80_KLULA RecName: Full=Putative DNA helicase INO80 gi|49643490|emb|CAG99442.1| KLLA0E08999p [Kluyveromyces lactis] Length = 1489 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K+K L+ ++ K +++ + + +++ + + Sbjct: 1318 SAKLKKLDELLVKLKEEDHRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDL 1377 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1378 VHDWQTKPDIFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1431 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V VY L+ + TI+E + R + K +Q +++ KE Sbjct: 1432 GQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEGKAKE 1473 >gi|212533393|ref|XP_002146853.1| dsDNA-dependent ATPase (Rad54b), putative [Penicillium marneffei ATCC 18224] gi|210072217|gb|EEA26306.1| dsDNA-dependent ATPase (Rad54b), putative [Penicillium marneffei ATCC 18224] Length = 1054 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 69/215 (32%), Gaps = 44/215 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDE----------------------EKHWKEVHDEKIKA 58 + S +L N + + KI+ Sbjct: 593 NTEGAFSLLTVLKKLCNSPSLLTAKAGDEPPNATMEALLSTLTPSLRRQFSPSSSGKIRV 652 Query: 59 LEVIIEKAN---AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 L+ ++ + I++ ++ S L L K + ++N Sbjct: 653 LDQLLHNLQTTTSEKIVLVSNYTSTLNLLGILLTSLSLPFLRLDGSTPSAKRQSLVDDFN 712 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 K + G GLNL G + LV F + W+ + + R + G K Sbjct: 713 RAPASKCFAFLLSAKAGGTGLNLT-GASRLVLFDVDWNPAT-----DLQAMARIHRDGQK 766 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R ++Y ++ + ++E + QR TK + D ++ + Sbjct: 767 RHCYIYRIMLKGALEEKIWQRQVTKIGLADSVMES 801 >gi|73986608|ref|XP_867733.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform 8 [Canis familiaris] Length = 1593 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 66/204 (32%), Gaps = 34/204 (16%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWK--------------EVHDEKIKALEVIIEK-- 65 + ++ ++ N + + K + L+ I+ K Sbjct: 1013 TKTLMNTIMQLRKICNHPYMFQHIEQCVASLWPQSHCGSLDLYRASGKFELLDRILPKLR 1072 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI--PLLF 113 A +++ S + ++ F + ++ +NE + Sbjct: 1073 ATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFL 1132 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNLQ + ++ F W+ + + R + G + V V L Sbjct: 1133 LSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQDRAHRIGQQNEVRVLRLCTV 1186 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 N+++E +L + K + ++ A Sbjct: 1187 NSVEEKILAAAKYKLNVDQKVIQA 1210 >gi|302664731|ref|XP_003023992.1| hypothetical protein TRV_01854 [Trichophyton verrucosum HKI 0517] gi|291188017|gb|EFE43374.1| hypothetical protein TRV_01854 [Trichophyton verrucosum HKI 0517] Length = 1692 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 35/191 (18%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 1336 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQAGGHRALIFTQMTK 1379 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S G G+NL G Sbjct: 1380 MLDILEQFLNIHGHRYLRLDGSTKIEQRQLLTERFNNDTRILAFILSSRSGGLGINLT-G 1438 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K Sbjct: 1439 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKR 1493 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1494 MLDDVVIQEGE 1504 >gi|169606802|ref|XP_001796821.1| hypothetical protein SNOG_06450 [Phaeosphaeria nodorum SN15] gi|160707083|gb|EAT86281.2| hypothetical protein SNOG_06450 [Phaeosphaeria nodorum SN15] Length = 1598 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 70/212 (33%), Gaps = 31/212 (14%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKALEV------------IIE 64 + E N ++ ++ + Y E + EV + L Sbjct: 892 KQQERANLSNILMQLRKCLCHPFVYSREIEERTEVAAVSHRNLVEASAKLSLLELLLPKL 951 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL-- 112 K +++ F L ++ + I ++N PL Sbjct: 952 KERGHRVLIFSQFLDMLNIVEDFLDGMEMAYQRLDGQMGSLEKQKRIDQFNAPDSPLFAF 1011 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ W+ + + + R + G K V + L+ Sbjct: 1012 LLSTRAGGVGINL-ATADTVIILDPDWNPHQ-----DLQAIARAHRIGQKNKVLCFQLMT 1065 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +++++E ++Q R K + +++ L + I Sbjct: 1066 RSSVEEKIIQMGRKKMALDHVVVEQLDADDIE 1097 >gi|302786754|ref|XP_002975148.1| hypothetical protein SELMODRAFT_102849 [Selaginella moellendorffii] gi|300157307|gb|EFJ23933.1| hypothetical protein SELMODRAFT_102849 [Selaginella moellendorffii] Length = 1017 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 76/215 (35%), Gaps = 27/215 (12%) Query: 4 YHKF-QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKI 56 Y + + L G + + ++ + N + + + K Sbjct: 588 YQQMIESRRVGLLTGSGKKQVGLQNTVMQLRKCCNHPYLFLNKDYEPRDRDEIIRASGKF 647 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 + L+ ++ K +++ + L+ + +Q + Sbjct: 648 ELLDRLLPKLQKTGHRVLLFSQMTRLMDLLEMYLTTRGFTYLRLDGTTKTEDRGKKLQMF 707 Query: 105 NEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N P + G GLNLQ + ++ F W+ + +++ R + G K Sbjct: 708 NAEDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQK 761 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ L++ +I+E +L+R ++K I ++ A Sbjct: 762 KEVHVFVLVSVGSIEEEILERAKSKMGIDAKVIQA 796 >gi|118373098|ref|XP_001019743.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89301510|gb|EAR99498.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1254 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 68/204 (33%), Gaps = 25/204 (12%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWKEVHDEKIKALEVIIEKA 66 + G + + ++ ++ N + + K+ L+ +++K Sbjct: 417 ITGSEDDKKFYLNILMQLRKVCNHPYLFEGIEEEGLPPLGEHIITNCGKMMVLDKLLQKL 476 Query: 67 NAAPI--IVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEGKIP-LLFAH 115 ++ L D+D E + Sbjct: 477 KNGKHQVLIFSQMTMVLEDYCNYRQFKYCRIDGNTDMTDRDNQISDFVKEDSTKYIFLLS 536 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + +V + W+ + ++ + R + G K V VY LI++NT Sbjct: 537 TRAGGLGINL-ATADTVVLYDSDWNPQ-----MDLQAMDRAHRIGQKNIVNVYRLISENT 590 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 I+E +++R K L++ + Sbjct: 591 IEEKIIERQTIKLKWDQLIIQQGR 614 >gi|50547625|ref|XP_501282.1| YALI0C00363p [Yarrowia lipolytica] gi|49647149|emb|CAG81577.1| YALI0C00363p [Yarrowia lipolytica] Length = 1320 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 78/232 (33%), Gaps = 47/232 (20%) Query: 6 KFQRELYCDLQGENIEAFNS----------ASKTVKCLQLANGAVYYDEEKHW------- 48 Q++ Y ++ +N A N+ + + + +N + + Sbjct: 539 DMQQDYYKNIISKNYTALNAGATGGHQMSLLNIMTELKKASNHPYLFPTAESKFLSLAEN 598 Query: 49 ----------KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 + K+ L+ ++ + + +++ L L + Sbjct: 599 GASRENVFRGMIMTSGKMVLLDKLLTQLKKDGHRVLIFSQMVRMLDILGDYLQIKGYQFQ 658 Query: 97 D----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I +N + + G G+NL + ++ F W+ + Sbjct: 659 RLDGTVPSATRRIAIDHYNAPDSNDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA- 716 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K V VY ++++T++E VL+R R K ++ +++ Sbjct: 717 ----DLQAMARAHRIGQKNHVMVYRFVSKDTVEEQVLERARKKMILEYAIIS 764 >gi|219123447|ref|XP_002182036.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406637|gb|EEC46576.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 545 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 85/247 (34%), Gaps = 55/247 (22%) Query: 3 QYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD----------------- 43 Y +++ L G+ + +S +K AN Sbjct: 282 MYQHLVNSKDMQHVLDGKQVNCLSSIQMLMKL---ANHPSLASMAAPGADGIAKFLPYVP 338 Query: 44 --------EEKHWKEVHDEKIKALEVIIEKA-----NAAPIIVAYHFNSDLARLQKAFPQ 90 + + K+ L ++++ I++ ++ L + + + Sbjct: 339 GEGGGRRGDFAPVRPEWSGKMFVLYRLMKEMRKPGNGNDKIVIVSNYTQTLDLIGRMCRE 398 Query: 91 ----------GRTLDKDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLW 138 T+ K E+N+ PL + G GLNL GGN LV F Sbjct: 399 NSWGFCRLDGSITMKKRQKMCDEFNDPNSPLVAFLLSSKAGGCGLNL-IGGNRLVLFDPD 457 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ +++ R + G K+ F Y +A T++E + QR +K +Q ++ Sbjct: 458 WNPA-----VDKQAAARCWRDGQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVV--DD 510 Query: 199 KKETIHV 205 K++T + Sbjct: 511 KEQTNQL 517 >gi|189209013|ref|XP_001940839.1| DNA repair and recombination protein RAD26 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976932|gb|EDU43558.1| DNA repair and recombination protein RAD26 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 893 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 71/234 (30%), Gaps = 49/234 (20%) Query: 2 KQYHKFQRE--LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + +I + ++ N K + E ++++ Sbjct: 513 EAYRAVLDSPTFRLAMGSSDI----ALQLINVLKKICNSPSLLKSSKDNDDTPSEMLQSI 568 Query: 60 EVII------------------------EKANAAPIIVAYHFNSDLARLQK--------- 86 +I I++ ++ + L +++ Sbjct: 569 LPLIPNNILNSSASSAKLRLLDSLVHRIYTTTEEKIVIVSNYTTTLDMIERLLVSLSYTY 628 Query: 87 -AFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 K ++++N+ S G GLNL G + +V F + W+ Sbjct: 629 LRLDGSTPASKRQALVEKFNKTPKTTSFAFLLSAKSGGVGLNL-IGASRIVLFDIDWNPA 687 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K VY + Q +DE + QR K + + +++ Sbjct: 688 T-----DLQAMARIHRDGQKLPCKVYRFLVQGGLDEKIYQRQIMKMGLANAVVD 736 >gi|168062755|ref|XP_001783343.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] gi|162665144|gb|EDQ51838.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] Length = 2174 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 66/236 (27%), Gaps = 49/236 (20%) Query: 3 QYHKF----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------- 51 Y K ++ L + + ++ + N E Sbjct: 1728 AYQKLLMKHVKDKMKSLNHAK--GRSIQNTVMELRNICNHPYLSQLHSEETEKVLPPHYL 1785 Query: 52 -----HDEKIKALEVIIEK-------------ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 K++ L+ I+ K ++ L ++ Sbjct: 1786 PIVVRFCGKLEMLDRILPKLKAANHKVSLMTSRKGHSVLFFSTMTRLLDVMEDYLEWKGY 1845 Query: 94 LD----------KDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + IQ++N + + + G G+NLQ + ++ F W+ Sbjct: 1846 KYLRLDGSTGGSERGALIQDFNAPQSEAFIFLLSIRAGGIGINLQA-ADTVIIFDTDWNP 1904 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + ++ R + G KR V V +I+E V K + + + A Sbjct: 1905 Q-----VDLQAQARAHRIGQKRDVLVLRFETVKSIEEHVRASAEYKLGVANQSITA 1955 >gi|85014197|ref|XP_955594.1| DNA repair and recombination protein [Encephalitozoon cuniculi GB-M1] gi|19171288|emb|CAD27013.1| RAD26-LIKE DNA REPAIR AND RECOMBINATION PROTEIN [Encephalitozoon cuniculi GB-M1] Length = 695 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 74/239 (30%), Gaps = 53/239 (22%) Query: 1 MKQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 ++ Y++ + + L G+ N S ++ N K Sbjct: 387 IELYNRVLESKHIMKVLTGK----ANLLSGISMLRKVCNHPRLLFPRKLGVSEDCEEEAS 442 Query: 53 ------------------------DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQK 86 KIK L ++ ++ ++V L +++ Sbjct: 443 DEKNGEDEALELPGADVSYDLVSSSCKIKILVDLLKKWRSEGNKVLVFSQTIRMLDIIER 502 Query: 87 A--------FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 P + +N + + L G GLNL G + +V + Sbjct: 503 CVRKYTYLRMDGRTPTSSRPGLVDRFNEDEDVFLFLLTTKVGGLGLNLT-GASRIVIYDP 561 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + R + G K+ V +Y + ++TI+E V Q+ K + +L+ Sbjct: 562 DWNPST-----DTQAKERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVLS 615 >gi|326481938|gb|EGE05948.1| dsDNA-dependent ATPase [Trichophyton equinum CBS 127.97] Length = 1004 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 68/216 (31%), Gaps = 46/216 (21%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEV------------------------HDEKI 56 + ++ ++ N + KI Sbjct: 533 NSESTLQLITILKKVCNSPSLLKPKVEDNGKGEDSSMSAFISSLPPNIHRCLAAGSSGKI 592 Query: 57 KALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + L+ ++ + +++ ++ S L L K +++ Sbjct: 593 RVLDQLLYNLQSKTTEKVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVED 652 Query: 104 WN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNL G + LV F + W+ + + R + G Sbjct: 653 FNRSPSSSCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DIQAMARIHRDG 706 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR +Y L+ + I+E + QR TK + D +++ Sbjct: 707 QKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMD 742 >gi|321257722|ref|XP_003193686.1| DNA recombination and repair protein Rad54B [Cryptococcus gattii WM276] gi|317460156|gb|ADV21899.1| DNA recombination and repair protein Rad54B, putative [Cryptococcus gattii WM276] Length = 818 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 18/161 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 ++ + I+ I++ + L ++K ++ K + ++N Sbjct: 581 LERMLDHIKHHTNDKIVLISNATQTLDLMEKLCRSKRYGYLRLDGSMSVPKRSKIVAQFN 640 Query: 106 EGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + + G G+NL G N LV F W+ Q + R + G K+ Sbjct: 641 QPESKEFVFLLSSKAGGCGINL-IGANRLVLFDPDWNPASDQ-----QALARVWRDGQKK 694 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 FVY TI+E + QR K + +++ + H Sbjct: 695 ECFVYRFQTTGTIEEKIFQRQCQKQNLSACVVDEAEDTARH 735 >gi|145335288|ref|NP_172336.3| ATRX; ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|332190193|gb|AEE28314.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] gi|332190194|gb|AEE28315.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] gi|332190195|gb|AEE28316.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] Length = 1479 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 16/120 (13%) Query: 96 KDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + +NE ++ + G+NL Y N ++ W+ + Sbjct: 1181 ERQKLVDRFNEPDNKRVKCTLISTRAGSLGINL-YAANRVIIVDGSWNPT-----YDLQA 1234 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-------KKETIHV 205 + R + G K+ VF Y L+A+ TI+E + +R TK + +++ K+E +H+ Sbjct: 1235 IFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1294 >gi|9802554|gb|AAF99756.1|AC003981_6 F22O13.8 [Arabidopsis thaliana] Length = 1471 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 16/120 (13%) Query: 96 KDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + +NE ++ + G+NL Y N ++ W+ + Sbjct: 1177 ERQKLVDRFNEPDNKRVKCTLISTRAGSLGINL-YAANRVIIVDGSWNPT-----YDLQA 1230 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-------KKETIHV 205 + R + G K+ VF Y L+A+ TI+E + +R TK + +++ K+E +H+ Sbjct: 1231 IFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1290 >gi|330443433|ref|NP_009629.4| Rdh54p [Saccharomyces cerevisiae S288c] gi|329136720|tpg|DAA07193.2| TPA: Rdh54p [Saccharomyces cerevisiae S288c] Length = 958 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 34/213 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------------VHDEKIKA 58 L + +S ++ N + ++K ++ K+K Sbjct: 609 ARLDFGQLTFSSSLGLITLLKKVCNSPGLVGSDPYYKSHIKDTQSQDSYSRSLNSGKLKV 668 Query: 59 LEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L ++ K ++V ++ L ++ + + +N Sbjct: 669 LMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFN 728 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I S G GLNL G + L+ F W+ ++ ++R + G K+ Sbjct: 729 RNPAIFGFLLSAKSGGVGLNL-VGASRLILFDNDWNPS-----VDLQAMSRIHRDGQKKP 782 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y L+ IDE +LQR K+++ L Sbjct: 783 CFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 815 >gi|330845465|ref|XP_003294605.1| hypothetical protein DICPUDRAFT_4822 [Dictyostelium purpureum] gi|325074901|gb|EGC28868.1| hypothetical protein DICPUDRAFT_4822 [Dictyostelium purpureum] Length = 1004 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 76/226 (33%), Gaps = 39/226 (17%) Query: 7 FQRELYCDLQGENIEAF------------NSASKTVKCLQLANGAVYY-------DEEKH 47 Q++ Y L ++IEA + ++ + N + Sbjct: 397 MQKDWYKRLLTKDIEAVMNPGSKGQAARVRLLNICMQLRKACNHPYLFDGAEEEPYTTGE 456 Query: 48 WKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD---------- 95 + K+ L+ +++K + +++ L L+ Sbjct: 457 HLITNSGKMVLLDKLLKKLQERGSRVLIFSQMARMLDILEDYMLYRNYRYARIDGSTDSV 516 Query: 96 KDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +I +N+ L + G G+ L ++++ F W+ + ++ Sbjct: 517 SRENSIDNFNKPGSELFAFLLTTRAGGLGITL-NTADVVILFDSDWNPQ-----MDLQAQ 570 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY + + +++E ++++ K + L++ + Sbjct: 571 DRAHRIGQTKPVTVYRFVTEASMEEKMVEKAEMKLQLDALVIQQGR 616 >gi|156847192|ref|XP_001646481.1| hypothetical protein Kpol_1048p54 [Vanderwaltozyma polyspora DSM 70294] gi|156117158|gb|EDO18623.1| hypothetical protein Kpol_1048p54 [Vanderwaltozyma polyspora DSM 70294] Length = 1902 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 74/254 (29%), Gaps = 65/254 (25%) Query: 2 KQYHKF--QRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----- 50 + Y F +++ + + + +L N E H + Sbjct: 1574 QLYKDFANKQKNVVEKDIQNTADVENKQHIFQALQYMRKLCNHPSLILSENHPQLKQVDE 1633 Query: 51 ------------VHDEKIKALEVIIEKA----------------------NAAPIIVAYH 76 V+ K+ AL ++ + + ++ Sbjct: 1634 YLKQTGLGLHDIVNAPKLGALRNLLFECGIGEDDMDKKSTDQLVPSNTVISQHRALIFCQ 1693 Query: 77 FNSDLAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 L ++++N + I L G G Sbjct: 1694 LKDMLDLVENDLFKKYMPSVTYMRLDGSVDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLG 1753 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL G + ++F W+ M + + R + G K+ V VY +I + T++E ++ Sbjct: 1754 LNLT-GADTVIFIEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRIITKGTLEEKIMG 1807 Query: 183 RLRTKSTIQDLLLN 196 + K I ++N Sbjct: 1808 LQKFKMNIASTVVN 1821 >gi|156840700|ref|XP_001643729.1| hypothetical protein Kpol_1009p17 [Vanderwaltozyma polyspora DSM 70294] gi|156114352|gb|EDO15871.1| hypothetical protein Kpol_1009p17 [Vanderwaltozyma polyspora DSM 70294] Length = 1515 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 65/204 (31%), Gaps = 16/204 (7%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + R + + F+ + K Q KEV + V Sbjct: 1310 KDYEEQVRNMKYNSNKLITIDFSKLEMSTKIKQC---------IAVIKEVFSKSSTEKIV 1360 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI-QEWNEGKIPLLFAHPASCG 120 I + I+ Y +L + + + + +L + Sbjct: 1361 IFSQFITFFSILDYFLKKELNIETFQYDGSMNAQQRSDVLSDFYKSSSTRVLLISMKAGN 1420 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GL L N ++ +W+ +E R + + V +Y L +N++++ + Sbjct: 1421 SGLTLT-CANHVIIVDPFWNP-----YVEEQAQDRCYRISQTKTVQIYRLFIKNSVEDRI 1474 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + K + D ++ K + ++ Sbjct: 1475 KELQDRKKKMVDAAMDPRKMKEVN 1498 Score = 35.1 bits (79), Expect = 5.5, Method: Composition-based stats. Identities = 5/93 (5%), Positives = 24/93 (25%), Gaps = 6/93 (6%) Query: 5 HKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKE---VHDEKIKAL 59 + ++ L + + + + ++ Q + + E + + K Sbjct: 1138 EQVNKKKVQKLLSKKVKGNYSSILTLLLRLRQACCHSELVVIGEKKAEALKLVNGK-NYE 1196 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR 92 + + N + + + + Sbjct: 1197 KDWLRYFNRIKGMSISCRENVIYSMDMMTCFWC 1229 >gi|150865881|ref|XP_001385272.2| helicase [Scheffersomyces stipitis CBS 6054] gi|149387137|gb|ABN67243.2| helicase [Scheffersomyces stipitis CBS 6054] Length = 809 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 71/212 (33%), Gaps = 36/212 (16%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------------------HDEKI 56 + + + +L N E+ + ++ KI Sbjct: 459 MNDSASTTTQAFTLINLFKKLCNSPSLLLEDNFFSKLIKGEKEEIELLNKNTLTTSSGKI 518 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW 104 L ++ + I++ ++ L L+ + + ++ Sbjct: 519 NILIPLLLEITSFNEKIVLVSNYTKTLDLLEAVLKKLDLSFLRLDGSTAKNLRNKLVNQF 578 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ I + S G GLNL G + L+ F W+ ++ ++R + G R Sbjct: 579 NKSNINVFLLSSKSGGMGLNL-VGASRLILFDNDWNPS-----VDLQSMSRIHRDGQTRP 632 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F+Y ++ TIDE + QR KS + L+ Sbjct: 633 CFIYRILTTGTIDEKIFQRQLMKSKLSSKFLD 664 >gi|212529122|ref|XP_002144718.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210074116|gb|EEA28203.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1043 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPC 99 KI+AL I+ +A IV F L +++ + R ++ Sbjct: 804 PSTKIRALIRILRKEAPEYKFIVFSVFTQMLDKIEPFLKRANLGYARYDGSMRNDLREAS 863 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 Q N +L + GLNL + +V +W+ +E + R + Sbjct: 864 LEQLRNRSSTRVLLCSLRAGALGLNLTA-ASRVVILEPFWNP-----FVEEQAIDRVHRL 917 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y + +NT++E ++ K + + + Sbjct: 918 NQTIDVKIYKITVKNTVEERIIDLQERKRELANATIEG 955 Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 16/43 (37%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y++ + R L + G ++ ++ ++ Q N Sbjct: 562 YNRLEQRTDRRLSQMMGGSKLDYASALVMLLRLRQACNHPDLV 604 >gi|74189356|dbj|BAE22708.1| unnamed protein product [Mus musculus] Length = 517 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 130 LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS 189 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 190 NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL 249 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++NE + + G GLNLQ + +V F W+ + Sbjct: 250 DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ--- 305 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 306 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 354 >gi|119612120|gb|EAW91714.1| hCG2009220, isoform CRA_d [Homo sapiens] Length = 499 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 75/249 (30%), Gaps = 57/249 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 ++ Y K LQG + + +L N KE K Sbjct: 145 IELYRKLLNSQVVRFCLQGLLENSPH-LICIGALKKLCNHPCLLFNSIKEKECSSTCDKN 203 Query: 59 LEVIIEK------------------------------------ANAAPIIVAYHFNSDLA 82 E + K +++ ++ L Sbjct: 204 EEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLN 263 Query: 83 RLQKAFPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGN 130 LQ+ + + + + +N + + G GLNL GG+ Sbjct: 264 ILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNL-IGGS 322 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 323 HLILYDIDWNPAT-----DIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGL 377 Query: 191 QDLLLNALK 199 +++ K Sbjct: 378 CGAVVDLTK 386 >gi|302791571|ref|XP_002977552.1| hypothetical protein SELMODRAFT_176282 [Selaginella moellendorffii] gi|300154922|gb|EFJ21556.1| hypothetical protein SELMODRAFT_176282 [Selaginella moellendorffii] Length = 1032 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 76/215 (35%), Gaps = 27/215 (12%) Query: 4 YHKF-QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKI 56 Y + + L G + + ++ + N + + + K Sbjct: 588 YQQMIESRRVGLLTGSGKKQVGLQNTVMQLRKCCNHPYLFLNKDYEPRDRDEIIRASGKF 647 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 + L+ ++ K +++ + L+ + +Q + Sbjct: 648 ELLDRLLPKLQKTGHRVLLFSQMTRLMDLLEMYLTTRGFTYLRLDGTTKTEDRGKKLQMF 707 Query: 105 NEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N P + G GLNLQ + ++ F W+ + +++ R + G K Sbjct: 708 NAEDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHRIGQK 761 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V+ L++ +I+E +L+R ++K I ++ A Sbjct: 762 KEVHVFVLVSVGSIEEEILERAKSKMGIDAKVIQA 796 >gi|159489044|ref|XP_001702507.1| predicted protein [Chlamydomonas reinhardtii] gi|158280529|gb|EDP06286.1| predicted protein [Chlamydomonas reinhardtii] Length = 533 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 67/222 (30%), Gaps = 40/222 (18%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW------------------ 48 Q + + S +L N + Sbjct: 286 LQSKAARRVLNAGKTTSGVLSAITSLKKLCNHPKLIYDAAAAAAAGEDGEGKIEGFEVGP 345 Query: 49 ----KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTL 94 + + ++ I++ ++ S L + T+ Sbjct: 346 AEGAVGGKMAVLARMLHVLYTETTDRIVLVSNYTSTLDLFVALCRERGYPFVRLDGTTTI 405 Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +K ++ +N+ + G GLNL G N LV F W+ + Sbjct: 406 NKRQKLVKVFNDPVEKQFAFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAN-----DAQA 459 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G ++ VFVY ++ +I+E V QR +K ++ L+ Sbjct: 460 AARVWRDGQRKRVFVYRFLSTGSIEEKVFQRQMSKEGLKQLV 501 >gi|308807292|ref|XP_003080957.1| DNA repair protein RAD54-like (ISS) [Ostreococcus tauri] gi|116059418|emb|CAL55125.1| DNA repair protein RAD54-like (ISS) [Ostreococcus tauri] Length = 816 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 21/160 (13%) Query: 50 EVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 E H K L ++ I++ ++ L + + + G T+ K Sbjct: 539 EEHSGKFAVLARLLANLRSETKDRIVIISNYTQTLDLIAQMCIERHYPFVRLDGGTTIGK 598 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++E+N+ + + G G+NL GGN LV F W+ ++ Sbjct: 599 RQKLVKEFNDPTSNSFVFLLSSKAGGCGINL-IGGNRLVLFDPDWNPAN-----DKQAAA 652 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G K+ ++Y +A TI+E V QR +K ++Q+++ Sbjct: 653 RCWRDGQKKKCYLYRFLAAGTIEEKVFQRQLSKESLQNVV 692 >gi|257468947|ref|ZP_05633041.1| SWF/SNF family helicase [Fusobacterium ulcerans ATCC 49185] Length = 915 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 79/213 (37%), Gaps = 28/213 (13%) Query: 2 KQYHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + Y + G F + Q+ + E V K Sbjct: 695 KLYEERRSYYYKMVNSQIRENGIGKTQFFILQALNELRQITS-----CPEAKSNGVTSSK 749 Query: 56 IKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAF--PQGRTLDKDPCTIQEW 104 + L I + N ++V ++ DL R + G T D+ + Sbjct: 750 REVLVNNIVEAVENGHKVLVFTNYINSIENICEDLKRYGINYLSMTGSTKDRQSLVDRFQ 809 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + K + + G GLNL + + + WW+ + +E + R + G R Sbjct: 810 KDNKYKVFIMTLKTGGVGLNLTA-ADTIFIYDPWWN-----KTVENQAIDRAYRLGQDRT 863 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VF Y LI ++TI+E +LQ TKS + D L++ Sbjct: 864 VFSYKLILKDTIEEKILQLQDTKSKLLDNLISE 896 >gi|322701089|gb|EFY92840.1| chromo domain-containing protein 1 [Metarhizium acridum CQMa 102] Length = 1663 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 35/223 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSA-SKTVKCLQLANGAVYYDEEKHWKE------------ 50 Y Y L NS + ++ +++N + + Sbjct: 725 YKNILTRNYSALCDATGGHKNSLLNIMMELKKISNHPYMFPGAEERVLAGSVRREDQIKG 784 Query: 51 --VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K + +++ L L + Sbjct: 785 LITSSGKMMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYLSLRGYKFQRLDGTIAAGP 844 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + G G+NL + ++ F W+ + + + Sbjct: 845 RRMAINHFNADDSEDFCFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQAMA 898 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V +Y L+++ T++E VL+R R K ++ L + A Sbjct: 899 RAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTIQA 941 >gi|324500543|gb|ADY40253.1| ATP-dependent helicase brm [Ascaris suum] Length = 1261 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 80/225 (35%), Gaps = 36/225 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD----EEKHWKEVHD----- 53 Y Q+ + + I A+ ++ +L N + E +++ +V + Sbjct: 737 LYQHMQKGVL--IDSNRIGGRLLANTAMQLRKLCNHPFLFQSIEEECRNYWKVPEISGRD 794 Query: 54 -----EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K + L+ I+ K +++ S ++ ++ + Sbjct: 795 LYRVGGKFELLDRILLKLKVTGHRLLMFCQMTSLMSIMEDFLIYRQYRYLRLDGNTKSDD 854 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + + S G GLNLQ + +V F W+ + ++ + Sbjct: 855 REKLLDLYNAPQSEYFIFLLSTRSGGIGLNLQS-ADTVVIFDSDWNPHQ-----DKQAES 908 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G R V V LI N+I+E + + K I ++ A + Sbjct: 909 RAHRIGQSREVRVLRLITVNSIEEKIQATAKCKLDIDKKVIQAGR 953 >gi|330906673|ref|XP_003295556.1| hypothetical protein PTT_01652 [Pyrenophora teres f. teres 0-1] gi|311333059|gb|EFQ96347.1| hypothetical protein PTT_01652 [Pyrenophora teres f. teres 0-1] Length = 1167 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 74/203 (36%), Gaps = 21/203 (10%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLAN--GAVYYDEEKHWKEVHDEKIKALEVIIE 64 + E + + + I + +C QLA+ A+ E K + + K+ L +++ Sbjct: 902 LKEETFAESNPDIIYEELELYQDYQCHQLASKYHALKKFELKDHEWMDSGKVAKLLALLK 961 Query: 65 KA--NAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPCTIQ-EWNEGKIPL 111 K N +V F S D + + + + + I L Sbjct: 962 KYKENGDRALVFSQFTSVMDILGWVFDDHDINFMRMDGSTPIQERQSLMDVFYQDESIQL 1021 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 S G G+NL N ++ F ++ ++ + R + G R V V L+ Sbjct: 1022 FMISTKSGGAGINL-ACANKVIIFDSSFNPQD-----DIQAENRAHRVGQTREVEVVRLV 1075 Query: 172 AQNTIDELVLQRLRTKSTIQDLL 194 ++T++E + +K + ++ Sbjct: 1076 TKDTVEEQIYALGVSKLELDKMV 1098 >gi|149236886|ref|XP_001524320.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146451855|gb|EDK46111.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 1082 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 72/222 (32%), Gaps = 40/222 (18%) Query: 2 KQY-HKF-----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + +R + I + + K + K Sbjct: 862 KLYIQQMDVAEVERHCRVYYAKKQISNISIIKELTK--------------RDQGFEASAK 907 Query: 56 IKALEVIIEK----ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTI 101 I+ +I + II+ F L L + T++ I Sbjct: 908 IEKAIELINNIQQANPSEKIIIFSQFTTLFDLMKLVLDHLKILHLRYDGSMTVEAKNNVI 967 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +++ + +L + GL L N ++ +W+ +E + R + G Sbjct: 968 KQFYQSNCNVLLLSLRAGNVGLTLT-CANHVIIMDPFWNP-----FVEEQAMDRAHRIGQ 1021 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 ++ V V+ ++ NT++ +++ K + LN + ++I Sbjct: 1022 EKEVHVHRVLITNTVESRIMELQERKKELIGDALNENEMKSI 1063 >gi|26324980|dbj|BAC26244.1| unnamed protein product [Mus musculus] Length = 1240 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 67/245 (27%), Gaps = 55/245 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 + Y KF ++ +E + ++ +L + Sbjct: 380 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACRLLNLGTATFSAQD 437 Query: 43 ----DEEKHWKEVH----------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 ++ + + K+ L ++E + +V L +++ Sbjct: 438 ENEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIER 497 Query: 87 AFPQGRTLD-----------KDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + IQ + + G GL L +V Sbjct: 498 LLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTA-ATRVVI 556 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 557 FDPSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQT 611 Query: 195 LNALK 199 K Sbjct: 612 TGEKK 616 >gi|27414501|ref|NP_666347.2| DNA excision repair protein ERCC-6-like [Mus musculus] gi|81873794|sp|Q8BHK9|ERC6L_MOUSE RecName: Full=DNA excision repair protein ERCC-6-like; AltName: Full=ATP-dependent helicase ERCC6-like gi|22902399|gb|AAH37660.1| Excision repair cross-complementing rodent repair deficiency complementation group 6 - like [Mus musculus] gi|27368137|gb|AAN87172.1| excision repair cross-complementing rodent repair deficiency complementation group 6 C-like [Mus musculus] gi|123229764|emb|CAM24634.1| excision repair cross-complementing rodent repair deficiency complementation group 6-like [Mus musculus] Length = 1240 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 67/245 (27%), Gaps = 55/245 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 + Y KF ++ +E + ++ +L + Sbjct: 380 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACRLLNLGTATFSAQD 437 Query: 43 ----DEEKHWKEVH----------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 ++ + + K+ L ++E + +V L +++ Sbjct: 438 ENEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIER 497 Query: 87 AFPQGRTLD-----------KDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + IQ + + G GL L +V Sbjct: 498 LLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTA-ATRVVI 556 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 557 FDPSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQT 611 Query: 195 LNALK 199 K Sbjct: 612 TGEKK 616 >gi|302659152|ref|XP_003021270.1| hypothetical protein TRV_04621 [Trichophyton verrucosum HKI 0517] gi|291185160|gb|EFE40652.1| hypothetical protein TRV_04621 [Trichophyton verrucosum HKI 0517] Length = 922 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 66/216 (30%), Gaps = 46/216 (21%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEV------------------------HDEKI 56 + ++ ++ N + KI Sbjct: 533 NSESALQLITILKKVCNSPSLLKPKVEDNGKGEDTSMSALLSSLPPNIHRSLAAGSSGKI 592 Query: 57 KALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 + L+ ++ +++ ++ S L L K +++ Sbjct: 593 RVLDQLLYNLQSKTKEKVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVED 652 Query: 104 WN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNL G + LV F + W+ + + R + G Sbjct: 653 FNRSPSSSCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DIQAMARIHRDG 706 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR +Y L+ + I+E + QR TK + D ++ Sbjct: 707 QKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMG 742 >gi|221502667|gb|EEE28387.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii VEG] Length = 2103 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 78/209 (37%), Gaps = 28/209 (13%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVI 62 QR LY ++G + ++ V+ ++ N + + + K L+V+ Sbjct: 1527 VQRYLYKMIEGNPVGQ----NRMVQLRKICNHPYLFCYSSYTPDESLVRCCGKFAMLDVL 1582 Query: 63 IE--KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE--GK 108 + K +++ L L+ G + ++ + +N+ + Sbjct: 1583 LPALKMGNHRVLIFSQMTKLLDILEVYLSLRGHTYLRLDGGTSSEERQKRLSLYNQEGSE 1642 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NLQ + ++ F W+ + + +R + G K+ V Sbjct: 1643 YFIFILSTKAGGLGVNLQS-ADTVIIFDSDWNPQN-----DEQAQSRAHRIGQKKEVLTL 1696 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+ +I+E +LQR K L++ + Sbjct: 1697 RFISVESIEEQILQRAECKLDKDKLVIQS 1725 >gi|221485125|gb|EEE23415.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii GT1] Length = 2103 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 78/209 (37%), Gaps = 28/209 (13%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVI 62 QR LY ++G + ++ V+ ++ N + + + K L+V+ Sbjct: 1527 VQRYLYKMIEGNPVGQ----NRMVQLRKICNHPYLFCYSSYTPDESLVRCCGKFAMLDVL 1582 Query: 63 IE--KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE--GK 108 + K +++ L L+ G + ++ + +N+ + Sbjct: 1583 LPALKMGNHRVLIFSQMTKLLDILEVYLSLRGHTYLRLDGGTSSEERQKRLSLYNQEGSE 1642 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NLQ + ++ F W+ + + +R + G K+ V Sbjct: 1643 YFIFILSTKAGGLGVNLQS-ADTVIIFDSDWNPQN-----DEQAQSRAHRIGQKKEVLTL 1696 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+ +I+E +LQR K L++ + Sbjct: 1697 RFISVESIEEQILQRAECKLDKDKLVIQS 1725 >gi|237842499|ref|XP_002370547.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii ME49] gi|211968211|gb|EEB03407.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii ME49] Length = 2668 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 78/209 (37%), Gaps = 28/209 (13%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVI 62 QR LY ++G + ++ V+ ++ N + + + K L+V+ Sbjct: 1527 VQRYLYKMIEGNPVGQ----NRMVQLRKICNHPYLFCYSSYTPDESLVRCCGKFAMLDVL 1582 Query: 63 IE--KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE--GK 108 + K +++ L L+ G + ++ + +N+ + Sbjct: 1583 LPALKMGNHRVLIFSQMTKLLDILEVYLSLRGHTYLRLDGGTSSEERQKRLSLYNQEGSE 1642 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G G+NLQ + ++ F W+ + + +R + G K+ V Sbjct: 1643 YFIFILSTKAGGLGVNLQS-ADTVIIFDSDWNPQN-----DEQAQSRAHRIGQKKEVLTL 1696 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+ +I+E +LQR K L++ + Sbjct: 1697 RFISVESIEEQILQRAECKLDKDKLVIQS 1725 >gi|22326612|ref|NP_196132.2| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1| helicase-like transcription factor-like protein [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1| At5g05130 [Arabidopsis thaliana] gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis thaliana] Length = 862 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 22/151 (14%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIP--- 110 ++ +V F L L+ T+ K I E+ ++ Sbjct: 702 QENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPV 761 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + G G+NL + + F WW+ +Q ++RI + G K+ V + + Sbjct: 762 VLLASLKASGTGINLTA-ASRVYLFDPWWNPAVEEQAMDRI-----HRIGQKQEVKMIRM 815 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 IA+N+I+E VL+ + K + + A K+ Sbjct: 816 IARNSIEERVLELQQKKKNLAN---EAFKRR 843 >gi|167521471|ref|XP_001745074.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776688|gb|EDQ90307.1| predicted protein [Monosiga brevicollis MX1] Length = 827 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 66/204 (32%), Gaps = 34/204 (16%) Query: 8 QRELYCDLQGENIEAFNSA------SKTVK--CLQLANGAVYYDEEKHWKEVHDEKIKAL 59 R L ++ A + V+ Q +E+ + + + Sbjct: 530 VRRLLPGSDDNDVAARTTLLEGSGKVALVRHMLRQ----WREKTDERALLVSNSTRCLDI 585 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPA 117 ++ +A P + + + +N + Sbjct: 586 LQLLCEAEGWPFLR--------------LQGSTPTHQRLEMVNRFNARHHDDFVFLMSSK 631 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLN+ G + LV F W+ + + R + G R VF+Y L+A TI+ Sbjct: 632 AGGVGLNI-VGASRLVLFDTDWNPSH-----DLQAMARIWREGQTRPVFIYRLVATGTIE 685 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 E + QR KS + ++ + E Sbjct: 686 EKIYQRQIVKSALGTTVMEDKETE 709 >gi|146161298|ref|XP_977122.2| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|146146801|gb|EAR86636.2| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1540 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 65/173 (37%), Gaps = 19/173 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD---- 95 + + K + KI A+ I+ +V F + + F + + Sbjct: 1358 FTFDPTQKYIRSSKINAVMNYIQNLQKTDDKCLVFTQFLGMMDLFEIDFQKNKIPYLRLD 1417 Query: 96 ------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I+ +N + + + + G GLNL N ++ WW+ + Sbjct: 1418 GSVNQKQRAEIIKRFNEDSQYKVFMISLKAGGVGLNLVK-ANHVLMVDPWWNPA-----V 1471 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 E + R + G K+ VFV I ++I+ +++ K + + + A KK+ Sbjct: 1472 EEQAIERCHRIGQKKEVFVTRFICDDSIESRMIKLHEEKRDLFENTIQATKKD 1524 >gi|134055853|emb|CAK96198.1| unnamed protein product [Aspergillus niger] Length = 1007 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 75/221 (33%), Gaps = 46/221 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE----------------------KHWKEVHDEKIKA 58 + ++ +L N +H+ K++ Sbjct: 577 NSESALQLITILKKLCNSPSLLTPRDVNETPSETIAALLSSLPPNLLRHFTPSSSAKLRV 636 Query: 59 LEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ + I++ ++ S L L K ++++N Sbjct: 637 LDQLLDGLRTKTSEKIVLVSNYTSTLNLLANLLTSLSLPFLRLDGSTPAQKRQSLVEDFN 696 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G GLNL G + LV F + W+ + + R + G K Sbjct: 697 RLPSNLCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DIQAMARIHRDGQK 750 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R +Y ++ + +++E + QR TK + D ++ KK+++ Sbjct: 751 RHCRIYRILLKGSLEEKIWQRQVTKIGLADSVME--KKDSV 789 >gi|317026496|ref|XP_001389729.2| DNA-dependent ATPase [Aspergillus niger CBS 513.88] Length = 993 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 75/221 (33%), Gaps = 46/221 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE----------------------KHWKEVHDEKIKA 58 + ++ +L N +H+ K++ Sbjct: 563 NSESALQLITILKKLCNSPSLLTPRDVNETPSETIAALLSSLPPNLLRHFTPSSSAKLRV 622 Query: 59 LEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ + I++ ++ S L L K ++++N Sbjct: 623 LDQLLDGLRTKTSEKIVLVSNYTSTLNLLANLLTSLSLPFLRLDGSTPAQKRQSLVEDFN 682 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G GLNL G + LV F + W+ + + R + G K Sbjct: 683 RLPSNLCFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DIQAMARIHRDGQK 736 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R +Y ++ + +++E + QR TK + D ++ KK+++ Sbjct: 737 RHCRIYRILLKGSLEEKIWQRQVTKIGLADSVME--KKDSV 775 >gi|148682181|gb|EDL14128.1| mCG2900 [Mus musculus] Length = 1217 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 67/245 (27%), Gaps = 55/245 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 + Y KF ++ +E + ++ +L + Sbjct: 357 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACRLLNLGTATFSAQD 414 Query: 43 ----DEEKHWKEVH----------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 ++ + + K+ L ++E + +V L +++ Sbjct: 415 ENEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIER 474 Query: 87 AFPQGRTLD-----------KDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + IQ + + G GL L +V Sbjct: 475 LLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTA-ATRVVI 533 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 534 FDPSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQT 588 Query: 195 LNALK 199 K Sbjct: 589 TGEKK 593 >gi|38014266|gb|AAH01474.2| RAD54L2 protein [Homo sapiens] Length = 1159 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + I ++N+ L + G+NL G N +V F Sbjct: 470 RNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 528 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ F+Y L+A T+++ + R +K + D +++ Sbjct: 529 SWNP-----CHDAQAVCRVYRYGQKKPCFIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 583 Query: 198 LK 199 L Sbjct: 584 LN 585 >gi|303283790|ref|XP_003061186.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226457537|gb|EEH54836.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 962 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 71/223 (31%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFN-------SASKTVKCLQLANGAVYY--------DEEKHWKE 50 Q++ Y ++IE N + ++ + N + Sbjct: 340 DMQKDYYKKALQKDIEVVNRGGDRSRLLNMVMQLRKCCNHPYLFQGAEPGPPYFTGEHII 399 Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ + Sbjct: 400 ENSGKMVLLDKLLTRLKEKGSRVLIFSQMTRLLDILEDYMIYRQHKYCRIDGNTSGEDRE 459 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + G G+NL + ++ + W+ + ++ + R Sbjct: 460 NAIDGYNAPGSEKFAFLLSTRAGGLGINLVT-ADTVIIYDSDWNPQ-----MDLQAMDRA 513 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V V+ +++E V+++ K + L++ + Sbjct: 514 HRIGQTREVSVFRFCTDMSVEEKVIEKAYKKLALDALVIQQGR 556 >gi|255071433|ref|XP_002499390.1| SNF2 super family [Micromonas sp. RCC299] gi|226514653|gb|ACO60649.1| SNF2 super family [Micromonas sp. RCC299] Length = 865 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 9/108 (8%) Query: 91 GRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + I+E+ ++F + G G+NL + + WW+ Sbjct: 738 GVSAAGREKCIREFQSPDADSPDVIFVSLKAGGVGINLTA-ASFVYMLDPWWNPAT---- 792 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 E + R + G R V V + +++IDE +++ + K + Sbjct: 793 -EDQAMDRVHRLGQDRPVKVVRFVCKDSIDEKMMELQQRKRELAKAAF 839 >gi|259146092|emb|CAY79352.1| Chd1p [Saccharomyces cerevisiae EC1118] gi|323348857|gb|EGA83095.1| Chd1p [Saccharomyces cerevisiae Lalvin QA23] Length = 1468 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 78/228 (34%), Gaps = 39/228 (17%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y L G F+ + + + +N +D + Sbjct: 624 EYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTR 683 Query: 51 --------VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 + K+ L+ ++ K + +++ L L Sbjct: 684 ENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDG 743 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + +I +N + + G G+NL + +V F W+ + Sbjct: 744 TVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA----- 797 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 798 DLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 845 >gi|256271313|gb|EEU06383.1| Chd1p [Saccharomyces cerevisiae JAY291] Length = 1468 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 78/228 (34%), Gaps = 39/228 (17%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y L G F+ + + + +N +D + Sbjct: 624 EYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTR 683 Query: 51 --------VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 + K+ L+ ++ K + +++ L L Sbjct: 684 ENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDG 743 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + +I +N + + G G+NL + +V F W+ + Sbjct: 744 TVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA----- 797 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 798 DLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 845 >gi|6321012|ref|NP_011091.1| Chd1p [Saccharomyces cerevisiae S288c] gi|418395|sp|P32657|CHD1_YEAST RecName: Full=Chromo domain-containing protein 1; AltName: Full=ATP-dependent helicase CHD1 gi|603404|gb|AAB64691.1| Chd1p: transcriptional regulator [Saccharomyces cerevisiae] gi|285811798|tpg|DAA07826.1| TPA: Chd1p [Saccharomyces cerevisiae S288c] Length = 1468 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 78/228 (34%), Gaps = 39/228 (17%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y L G F+ + + + +N +D + Sbjct: 624 EYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTR 683 Query: 51 --------VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 + K+ L+ ++ K + +++ L L Sbjct: 684 ENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDG 743 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + +I +N + + G G+NL + +V F W+ + Sbjct: 744 TVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA----- 797 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 798 DLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 845 >gi|238883925|gb|EEQ47563.1| conserved hypothetical protein [Candida albicans WO-1] Length = 785 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 28/201 (13%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-----------VIIEKA 66 + F + + ++ N +++ +K++ +EK ++ + Sbjct: 461 KKFNQFEAFTMINLFKKICNSPSLLADDEFFKKIVEEKFNLGMASGKINILVPLLLEIAS 520 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAH 115 I++ ++ L L++ + + + ++N I + Sbjct: 521 LGEKIVLISNYTKTLDLLEQVLRKVSLTFSRLDGSTPNNVRNKLVNQFNTNPDINVFLLS 580 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 S G G+NL G + L+ F W+ Q + RI + G + F+Y L Sbjct: 581 SKSGGMGINL-VGASRLILFDNDWNPATDLQSMSRI-----HRDGQLKPCFIYRLFTTGC 634 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 IDE + QR K+ + L+ Sbjct: 635 IDEKIFQRQLVKNKLSSKFLD 655 >gi|60390959|sp|Q9FF61|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Short=SMARCA3-like protein 1 gi|10178052|dbj|BAB11535.1| helicase-like transcription factor-like protein [Arabidopsis thaliana] Length = 881 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 22/151 (14%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIP--- 110 ++ +V F L L+ T+ K I E+ ++ Sbjct: 721 QENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPV 780 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + G G+NL + + F WW+ +Q ++RI + G K+ V + + Sbjct: 781 VLLASLKASGTGINLTA-ASRVYLFDPWWNPAVEEQAMDRI-----HRIGQKQEVKMIRM 834 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 IA+N+I+E VL+ + K + + A K+ Sbjct: 835 IARNSIEERVLELQQKKKNLAN---EAFKRR 862 >gi|332190192|gb|AEE28313.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] Length = 1458 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 16/120 (13%) Query: 96 KDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + +NE ++ + G+NL Y N ++ W+ + Sbjct: 1160 ERQKLVDRFNEPDNKRVKCTLISTRAGSLGINL-YAANRVIIVDGSWNPT-----YDLQA 1213 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-------KKETIHV 205 + R + G K+ VF Y L+A+ TI+E + +R TK + +++ K+E +H+ Sbjct: 1214 IFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1273 >gi|225444469|ref|XP_002267771.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 792 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 54/147 (36%), Gaps = 17/147 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIP 110 ++E +A IV F S L + + Q KD + + Sbjct: 635 MVEMDGSAKGIVFSQFTSFLDLISYSLHQSGINCVQLVGKMTATAKDAAVKRFNEDPDCK 694 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + S G LNL + + WW+ QQ +RI + G + V V Sbjct: 695 IFLTSLKSGGAALNL-PVASYVFLMEPWWNPFVEQQAYDRI-----HRIGQYKPVRVIKF 748 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I +NTI+E +L+ K ++ + L + Sbjct: 749 IIENTIEERILELQEKKESLSEGALGS 775 Score = 35.5 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 9/99 (9%), Positives = 24/99 (24%), Gaps = 4/99 (4%) Query: 3 QYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + Q E ++ + + + Q + K + + D + Sbjct: 495 LYKECQLEFNRYVEDGTLMNYYVHILELITRLRQALDHPYLVVHSKSGEALCDICKWVAK 554 Query: 61 VIIEKANAAPIIVAY--HFNSDLARLQKAFPQGRTLDKD 97 ++ + A F L + + Sbjct: 555 DLVVTSCGHTFCKACLEDFTKILGKSLCPTCSLPFTPRK 593 >gi|151944881|gb|EDN63140.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae YJM789] Length = 1468 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 78/228 (34%), Gaps = 39/228 (17%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y L G F+ + + + +N +D + Sbjct: 624 EYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTR 683 Query: 51 --------VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 + K+ L+ ++ K + +++ L L Sbjct: 684 ENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDG 743 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + +I +N + + G G+NL + +V F W+ + Sbjct: 744 TVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA----- 797 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 798 DLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 845 >gi|74151005|dbj|BAE27633.1| unnamed protein product [Mus musculus] Length = 806 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 199 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 258 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 259 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 318 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 319 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 374 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 375 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 423 >gi|6599160|emb|CAB63724.1| hypothetical protein [Homo sapiens] Length = 580 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 75/249 (30%), Gaps = 57/249 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 ++ Y K LQG + + +L N KE K Sbjct: 226 IELYRKLLNSQVVRFCLQGLLENSPH-LICIGALKKLCNHPCLLFNSIKEKECSSTCDKN 284 Query: 59 LEVIIEK------------------------------------ANAAPIIVAYHFNSDLA 82 E + K +++ ++ L Sbjct: 285 EEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLN 344 Query: 83 RLQKAFPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGN 130 LQ+ + + + + +N + + G GLNL GG+ Sbjct: 345 ILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNL-IGGS 403 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 404 HLILYDIDWNPAT-----DIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGL 458 Query: 191 QDLLLNALK 199 +++ K Sbjct: 459 CGAVVDLTK 467 >gi|195054603|ref|XP_001994214.1| GH23502 [Drosophila grimshawi] gi|193896084|gb|EDV94950.1| GH23502 [Drosophila grimshawi] Length = 1982 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 33/247 (13%), Positives = 74/247 (29%), Gaps = 53/247 (21%) Query: 1 MKQYHKF----QRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKE---- 50 ++ Y F ++ L + + N + Sbjct: 1671 LRLYEDFSNKHLKDCLDKLDDTENLGTKSHIFQALRYLQNVCNHPKLVLRQPSDDLSSSV 1730 Query: 51 --------------VHDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLARLQKA 87 H K+ AL+ ++ + ++ + L ++ Sbjct: 1731 AAQLALTNSTLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEHD 1790 Query: 88 FPQGR-------------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + +N + I +L G GLNL G + ++ Sbjct: 1791 LLRKHLPRVTYLRLDGSVPASMRQDIVNNFNSDPSIDVLLLTTLVGGLGLNLT-GADTVI 1849 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ M + + R + G K+ V VY LI +N+++E ++ + K + Sbjct: 1850 FVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMSLQKFKIVTANT 1904 Query: 194 LLNALKK 200 +++A Sbjct: 1905 VVSAENA 1911 >gi|313870791|gb|ADR82283.1| DNA repair protein [Blumeria graminis f. sp. tritici] Length = 883 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 18/159 (11%) Query: 53 DEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCT 100 KI L I+++ + IV F S L ++ F R ++ Sbjct: 668 STKITQLIKILKEEVHEHKFIVFSQFTSMLNLIEPFFHANDLVFSRYDGSMRNDSREASL 727 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N+ K +L GLNL +V +W+ +E + R + Sbjct: 728 AKLRNDKKCRILLCSLKCGSLGLNLTA-ATRVVILEPFWNP-----FVEEQAIDRVHRLT 781 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 K V +Y + T++E +L+ K + + + K Sbjct: 782 QKTDVIIYKITISKTVEERILELQDKKRALANETIEGGK 820 Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 4/44 (9%), Positives = 14/44 (31%), Gaps = 3/44 (6%) Query: 2 KQYHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY 42 K Y + + +++ + ++ ++ Q N Sbjct: 448 KLYQRIEERASKNMKKLITGEVSYASALVMLLRLRQACNHPSLV 491 >gi|297742732|emb|CBI35366.3| unnamed protein product [Vitis vinifera] Length = 907 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 25/167 (14%) Query: 50 EVHDEKIKALEVIIEKANA--------APIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 E KI+A I++ + IV + S L ++ + + Sbjct: 726 EYSSSKIRAALEILQSHSYSNPETEGPIKAIVFSQWTSMLDLVEMSMNHSCIQYRRLDGT 785 Query: 98 ------PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++++N + ++ ++ + GLN+ ++++ LWW+ E Sbjct: 786 MSLASRDRAVKDFNTDPEVTVMLMSLKAGNLGLNMVA-ASLVILLDLWWNPTT-----ED 839 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V R + G R V V + ++T+++ +L K + Sbjct: 840 QAVDRAHRIGQTRPVTVSRITIKDTVEDRILALQEDKRKMVASAFGE 886 >gi|256273323|gb|EEU08262.1| Uls1p [Saccharomyces cerevisiae JAY291] Length = 1619 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 76/216 (35%), Gaps = 23/216 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCL-QLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + + + S+ K Q N V E ++ I+ ++ Sbjct: 1398 KLYDQVINQGFTE----EDLHAEYLSEMEKQKIQQKNVYVPNFESLEPSTKIEQCIQVIQ 1453 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEW-NEGK 108 + +++ II+ F + L+ + + I E+ + + Sbjct: 1454 RVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPE 1513 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L + GL L N +V +W+ +E R + + V V+ Sbjct: 1514 KRILLISMKAGNSGLTLT-CANHVVIVDPFWNP-----YVEEQAQDRCYRISQTKKVQVH 1567 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L ++++++ + + + K + D ++ K + ++ Sbjct: 1568 KLFIKDSVEDRISELQKRKKEMVDSAMDPGKIKEVN 1603 >gi|320170019|gb|EFW46918.1| SNF2 superfamily RAD5 protein [Capsaspora owczarzaki ATCC 30864] Length = 1372 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 55/153 (35%), Gaps = 17/153 (11%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGK 108 + + A +V + S + ++ F + + ++ + + Sbjct: 1190 KELWTVEQDAKAVVFSQWTSMMDLIEVEFRHQGFVYVRLDGSLSQPQRERVLEAFQRDPA 1249 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + ++ S G GLNL N + WW++ +E + R + G + V V Sbjct: 1250 VKIIIISLFSGGVGLNLTAAAN-VYLMDSWWNVA-----VENQALHRVHRIGQTKPVIVT 1303 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 IA T++ +L+ K + + L K E Sbjct: 1304 RFIAARTVETRMLKIQARKQFLANHALATNKSE 1336 >gi|321264770|ref|XP_003197102.1| swi2/Snf2-related ATPase, component of the SWR1 complex; Swr1p [Cryptococcus gattii WM276] gi|317463580|gb|ADV25315.1| Swi2/Snf2-related ATPase, component of the SWR1 complex, putative; Swr1p [Cryptococcus gattii WM276] Length = 932 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 64/167 (38%), Gaps = 17/167 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 + + + + E + KA +++ F L L+ A Sbjct: 733 HKFALDPEVFLEGGKVMAMVKHIERCKAEGKRMLLFSQFVMILDILEGALNHLGIRYTRL 792 Query: 91 --GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D+ + E+N+ I + + G G+NL +++V + ++ Sbjct: 793 DGQTKTDERQSLVDEFNDDTSITVFLLSTKAGGVGINLTA-ASVVVIYDQDFNP-----H 846 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +R R + G +R V V LI +N+IDE +L+ TK + D++ Sbjct: 847 NDRQAADRAYRIGQEREVEVIKLITKNSIDEDMLEIGLTKLQLDDMV 893 >gi|322706938|gb|EFY98517.1| chromo domain-containing protein 1 [Metarhizium anisopliae ARSEF 23] Length = 1668 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 35/223 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSA-SKTVKCLQLANGAVYYDEEKHWKE------------ 50 Y Y L NS + ++ +++N + + Sbjct: 713 YKNILTRNYSALCDATGGHKNSLLNIMMELKKISNHPYMFPGAEERVLAGSVRREDQIKG 772 Query: 51 --VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K + +++ L L + Sbjct: 773 LITSSGKMMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYLSLRGYKFQRLDGTIAAGP 832 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + G G+NL + ++ F W+ + + + Sbjct: 833 RRMAINHFNADDSEDFCFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQAMA 886 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G KR V +Y L+++ T++E VL+R R K ++ L + A Sbjct: 887 RAHRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTIQA 929 >gi|219110183|ref|XP_002176843.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411378|gb|EEC51306.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 509 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 70/214 (32%), Gaps = 27/214 (12%) Query: 8 QRELYCDLQGENIEAFNSASKT--VKCLQLANGAVYYDEEKHWKEVHDE-KIKALEVIIE 64 RE I + + K++ K K L I+ Sbjct: 264 VREELDRFNDFEIH-LTALELLEENRLR----HEQLGRYVLQEKDLFSSAKCKRLRAILP 318 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGK-IPL 111 I++ + S L L Q +++ I + IP+ Sbjct: 319 DLVGKGHRILIFSVWTSCLDLLSCLMEQMGLGYLRMEGSTPVNERQALIDRFTSETSIPV 378 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 +CG G+NL + + L ++ + R + G K+ V + +I Sbjct: 379 FLLSTKACGLGINLT-CADTCIMHDLDFNP-----FNDLQAEDRCHRIGQKKPVKIIKMI 432 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++T+DE + + + K+ + +++ +E +V Sbjct: 433 TEDTVDEDIYKMQQRKARMNAAIMDTDSREWNNV 466 >gi|325181644|emb|CCA16095.1| KIAA1416 protein putative [Albugo laibachii Nc14] Length = 1788 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 28/230 (12%), Positives = 68/230 (29%), Gaps = 36/230 (15%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVY--------------YDEE 45 + Y + L G N + ++ + N E Sbjct: 693 QWYRAIYEKNTSFLSRGGNPNNIPNLMNVMMELRKCCNHPYLNNGVEEILNEGLRTERER 752 Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ L+ ++ K +++ L ++ + Sbjct: 753 HEMMVKCCGKMVLLDKLLPRLKEGGHKVLIFSQMVRVLDIIEDYLRFLGHAYERLDGNIR 812 Query: 98 ----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + + ++ + G GLNL + +V F W+ + + Sbjct: 813 GNDRQAAVNRFVKEEYKRFVMLLSTKAGGLGLNLTA-ADTVVIFDSDWNPQN-----DLQ 866 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G +V +Y LI + T + + + K + +L +++E Sbjct: 867 AQARAHRIGQTHSVKIYRLITRKTYEMHMFHKASLKLGLDKAVLTHMRRE 916 >gi|297739163|emb|CBI28814.3| unnamed protein product [Vitis vinifera] Length = 964 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 55/156 (35%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTI 101 D + + ++E+ +A IV F S L + + + +D Sbjct: 796 DALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLQKSGITCVQLVGSMSMAARDAAIS 855 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + NE + + G LNL + + WW+ +ER R + G Sbjct: 856 RFTNEPDCKIFLMSLKAGGVALNLT-VASHVFLMDPWWNPA-----VERQAQDRIHRIGQ 909 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + + + TI+E +L+ K + + + Sbjct: 910 YKPIRIVRFVIEKTIEERILKLQEKKELVFEGTVGG 945 >gi|194382486|dbj|BAG64413.1| unnamed protein product [Homo sapiens] Length = 834 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 227 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 286 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 287 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 346 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 347 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 402 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 403 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 451 >gi|50306047|ref|XP_452985.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642118|emb|CAH01836.1| KLLA0C17578p [Kluyveromyces lactis] Length = 1525 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 76/214 (35%), Gaps = 41/214 (19%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------------------VHDEKI 56 ++G ++ N ++ K +N +D + + K+ Sbjct: 653 IKGGHVSLLNVMNELKK---ASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGKM 709 Query: 57 KALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 L+ ++ K + +++ L L + +I + Sbjct: 710 VLLDKLLTRLKKDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHF 769 Query: 105 N--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N + + + G G+NL + ++ F W+ + + + R + G K Sbjct: 770 NAEDSNDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQAMARAHRIGQK 823 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V VY ++++T++E VL+R R K ++ +++ Sbjct: 824 NHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 857 >gi|224095220|ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222853265|gb|EEE90812.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 923 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 52/146 (35%), Gaps = 17/146 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPL 111 + IV + S L ++ + Q + ++++N + ++ + Sbjct: 763 LSTEGPIKAIVFSQWTSMLDLVEFSLNQHCIQYRRLDGTMTLSSRDKAVKDFNTDPEVTV 822 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLN+ + ++ LWW+ E + R + G R V V L Sbjct: 823 MLMSLKAGNLGLNMVAACH-VILLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVTRLT 876 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 ++T+++ +L K + Sbjct: 877 IKDTVEDRILALQDEKRKMVASAFGE 902 >gi|218200575|gb|EEC83002.1| hypothetical protein OsI_28047 [Oryza sativa Indica Group] Length = 1235 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 50/141 (35%), Gaps = 17/141 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 IV + L L+ + + ++++N + ++ ++ + Sbjct: 1082 KAIVFSQWTGMLDLLELSLNSNLIQYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKA 1141 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E + R + G R V V L ++T+++ Sbjct: 1142 GNLGLNMVAACH-VILLDLWWNP-----YAEDQAIDRAHRIGQTRPVTVSRLTIKDTVED 1195 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +L K + K Sbjct: 1196 RILALQEEKRAMVSSAFGEDK 1216 >gi|224001126|ref|XP_002290235.1| hypothetical protein THAPSDRAFT_268889 [Thalassiosira pseudonana CCMP1335] gi|220973657|gb|EED91987.1| hypothetical protein THAPSDRAFT_268889 [Thalassiosira pseudonana CCMP1335] Length = 716 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 61/197 (30%), Gaps = 26/197 (13%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQ 85 + +A G++ + + ++ + IV F + L ++ Sbjct: 516 LKELQHVATGSILRRINLAEFATSSKIEALTQELVMMRQMSPGSKAIVFSQFTNMLDLIR 575 Query: 86 KAFPQ-----------------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 +D C + + + +L + G LNL Sbjct: 576 WRLHSDPYLEDIGLGCRALHGGMNVKARDICLKEFREDNNVRVLLMSLKAGGVALNLT-C 634 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N + WW+ Q I+R + G R + IA+NT++E +LQ K Sbjct: 635 ANYIYLIDPWWNPAAEMQAIDR-----THRLGQYRPIRAIRFIAENTVEERILQLQEKKR 689 Query: 189 TIQDLLLNALKKETIHV 205 + D + + + Sbjct: 690 LVFDGTIGRDAGSLLKM 706 >gi|125559347|gb|EAZ04883.1| hypothetical protein OsI_27065 [Oryza sativa Indica Group] Length = 821 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 23/165 (13%) Query: 53 DEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++AL ++ + + ++ F L L+ T K Sbjct: 644 SSKVQALLKLLRRSQSEDPLSKSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRS 703 Query: 99 CTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+++ +L A + G G+NL + + F WW+ +E + R Sbjct: 704 EVIRQFGCVGPDSPTVLLASLKAAGAGVNLTA-ASTVYLFDPWWNPG-----VEEQAMDR 757 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V V LI +++I+E +L+ K + K Sbjct: 758 VHRIGQTKEVKVVRLIVKDSIEERMLELQERKKKLISGAFGRKKG 802 >gi|323335419|gb|EGA76705.1| Uls1p [Saccharomyces cerevisiae Vin13] Length = 1619 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 76/216 (35%), Gaps = 23/216 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCL-QLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + + + S+ K Q N V E ++ I+ ++ Sbjct: 1398 KLYDQVINQGFTE----EDLHAEYLSEMEKQKIQQKNVYVPNFESLEPSTKIEQCIQVIQ 1453 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEW-NEGK 108 + +++ II+ F + L+ + + I E+ + + Sbjct: 1454 RVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPE 1513 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L + GL L N +V +W+ +E R + + V V+ Sbjct: 1514 KRILLISMKAGNSGLTLT-CANHVVIVDPFWNP-----YVEEQAQDRCYRISQTKKVQVH 1567 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L ++++++ + + + K + D ++ K + ++ Sbjct: 1568 KLFIKDSVEDRISELQKRKKEMVDSAMDPGKIKEVN 1603 >gi|317147437|ref|XP_001822137.2| nucleosome remodeling complex ATPase subunit (Snf2h) [Aspergillus oryzae RIB40] Length = 733 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 65/198 (32%), Gaps = 32/198 (16%) Query: 29 TVKCLQLANGAVYY-------DEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFN 78 ++ + + E + K L +++ II+ +FN Sbjct: 478 LMELRKCSIHPYLLDDAIPDPYELGAHVITNSGKYIVLLKMVQHFVLERGRKIIIFSNFN 537 Query: 79 S----------------DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 D R + ++ N+ + + + G G Sbjct: 538 QALNLCEDLLLTIQKNGDPVRYVRLDGSTSNARRNLSIYLFQNDPRYMVFLISIRAGGEG 597 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + ++F W+ + + R R + G K V ++ L ++ T++E + + Sbjct: 598 LNLVS-SSTVIFLDEDWNPQ-----VMRQAEARVHRIGQKHPVRIFKLQSKGTVEEQISR 651 Query: 183 RLRTKSTIQDLLLNALKK 200 R+ K+ + ++ + Sbjct: 652 RIVKKAYVATKIMEDINA 669 >gi|145349626|ref|XP_001419229.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579460|gb|ABO97522.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 983 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 76/247 (30%), Gaps = 62/247 (25%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE----------------- 45 Y F + Q +A +L N + Sbjct: 443 LYEHFLTSKAAN-QALTGKATAVLPAITALKKLCNHPKLIYDMINGAKNTGQAASGFSTC 501 Query: 46 -----------------------KHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNS 79 H E H K L ++ I++ ++ Sbjct: 502 AEFFTPGMYDGGGGRSGRGGGGMMHGWEEHSGKFAVLARLLANLRAETKDRIVIISNYTQ 561 Query: 80 DLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQY 127 L + + ++ K ++++N+ + + G G+NL Sbjct: 562 TLDLVGNMCRERNYPFVRLDGSTSIGKRQKLVKQFNDPTSNSFVFLLSSKAGGCGINL-I 620 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 GGN LV F W+ ++ R + G K+ ++Y +A TI+E V QR +K Sbjct: 621 GGNRLVLFDPDWNPAN-----DKQAAARCWRDGQKKKCYLYRFLAAGTIEEKVFQRQLSK 675 Query: 188 STIQDLL 194 ++Q+++ Sbjct: 676 ESLQNVV 682 >gi|134077641|emb|CAK45712.1| unnamed protein product [Aspergillus niger] Length = 716 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 34/202 (16%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII----EKA 66 +L+ + N SK +L + KI+ I+ + Sbjct: 473 SLAELKKD--AQKNKKSKLKYLRRL-----------EKTWMSSAKIEKAMEILRDVYHRE 519 Query: 67 NAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I+ F S L ++ R D++ + + ++ Sbjct: 520 GNEKTIIFSQFTSLLDLLEIPIARQGWDYRRYDGSMRPADRNTSVMDFTDNEDCRIMLVS 579 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + GLNL + ++ F +W+ +E V R + G R V ++ ++ ++T Sbjct: 580 LKAGNAGLNLVA-ASQVIIFDPFWNP-----YVEEQAVDRAHRIGQVRPVQIHRIVVKDT 633 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 +++ +L+ K + + L+ Sbjct: 634 VEDRILELQDKKRELVEGALDE 655 Score = 35.5 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 4/52 (7%), Positives = 11/52 (21%), Gaps = 5/52 (9%) Query: 4 YHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 Y+ + ++ G N ++ Q + Sbjct: 312 YNALEARSQNEVNRYLQQGVGRNYSNILVLLLRLRQACCHPHLIKDFTTEVN 363 >gi|256083283|ref|XP_002577876.1| helicase [Schistosoma mansoni] gi|238663214|emb|CAZ34114.1| helicase, putative [Schistosoma mansoni] Length = 1436 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/243 (13%), Positives = 72/243 (29%), Gaps = 54/243 (22%) Query: 3 QYHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYDE------------ 44 Y Q + G + + ++ ++ N + Sbjct: 827 LYSHMQSKGVILTDGSEKDKKGKGGCRTLMNTIMQLRKICNHPFMFPHIEMAIAEQNFLN 886 Query: 45 ----------------EKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 E K + L+ I+ K +++ S + +Q Sbjct: 887 VHNGNPPPTLPVPTQVEGKILYRSSGKFELLDRILPKLKCCGHRVLIFCQMTSLMTIMQD 946 Query: 87 AFPQGRTLD----------KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + ++N+ I + + G GLNLQ + ++ Sbjct: 947 YFDYRNFRYLRLDGTTRSEDRGELLVKFNDTSEDIFIFLLSTRAGGLGLNLQA-ADTVII 1005 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + + R + G + V V LI+ N+++E +L R K + + Sbjct: 1006 FDSDWNPHQ-----DLQAQDRAHRIGQQNEVRVLRLISINSVEEKILAAARFKLDVDQKV 1060 Query: 195 LNA 197 + A Sbjct: 1061 IQA 1063 >gi|198435106|ref|XP_002121833.1| PREDICTED: similar to Helicase domino [Ciona intestinalis] Length = 2659 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 61/162 (37%), Gaps = 19/162 (11%) Query: 49 KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDL-----------ARLQKAFPQGRTLD 95 E K++ L V++ + I++ L R + Sbjct: 1400 IEYDCGKLQVLNVLLRRFWVEKHRILIFTQMTRVLDILEAFLSYHGYRYLRLDGSTPIEQ 1459 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + N+ +I S G G+NL G + +VF+ W+ ++ R Sbjct: 1460 RMARMERFNNDPRIFCFILSTRSGGIGVNLT-GADTVVFYDSDWNPT-----MDAQAQDR 1513 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V +Y LI++ T++E +L++ K + ++ + Sbjct: 1514 CHRIGQTRDVHIYRLISERTVEENILKKANQKRLLGEMAIEG 1555 >gi|254576997|ref|XP_002494485.1| ZYRO0A02618p [Zygosaccharomyces rouxii] gi|238937374|emb|CAR25552.1| ZYRO0A02618p [Zygosaccharomyces rouxii] Length = 1438 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K++ L+ ++ K N +++ + + +++ + + Sbjct: 1265 SAKLRKLDELLVDLKRNGHRVLIYFQMTKMMDLMEEYLTYRQYKHIRLDGSSKLEDRRDL 1324 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1325 VHDWQTVPDLFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1378 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ ++TI+E + R + K +Q +++ Sbjct: 1379 GQTRQVTVYRLLVRDTIEERMRDRAKQKEHVQQVVMEG 1416 >gi|47213833|emb|CAG00637.1| unnamed protein product [Tetraodon nigroviridis] Length = 4522 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 70/189 (37%), Gaps = 24/189 (12%) Query: 13 CDLQGENIEAFNSASKTVK-CLQLAN--GAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 + G + F ++ + Q N G +Y + + +E ++ Sbjct: 2868 LKIGGHRVLIFTQMTRMLDVLEQFLNYHGHIYLRLDGN---------TRVEQRQVSSDGP 2918 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 + + F+ F ++ +N + +I S G G+NL G Sbjct: 2919 YVGCSRLFSHLCVHFLCTFSPLH-----QALMERFNADQRIFCFILSTRSGGVGVNLT-G 2972 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F+ W+ ++ R + G R V +Y LI++ T++E +L++ K Sbjct: 2973 ADTVIFYDSDWNPT-----MDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKR 3027 Query: 189 TIQDLLLNA 197 + D+ + Sbjct: 3028 MLGDMAIEG 3036 >gi|238495805|ref|XP_002379138.1| DNA excision repair protein Rad16, putative [Aspergillus flavus NRRL3357] gi|317147580|ref|XP_001822233.2| DNA excision repair protein Rad16 [Aspergillus oryzae RIB40] gi|220694018|gb|EED50362.1| DNA excision repair protein Rad16, putative [Aspergillus flavus NRRL3357] Length = 958 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I + N + Sbjct: 796 KLRSKKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQRQKSIDFFMNNVDV 855 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 856 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 909 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + +N + E + Sbjct: 910 LCIEDSVESRIVLLQEKKANLINGTINKDQGEALE 944 >gi|170092399|ref|XP_001877421.1| chromodomain-helicase DNA-binding protein [Laccaria bicolor S238N-H82] gi|164647280|gb|EDR11524.1| chromodomain-helicase DNA-binding protein [Laccaria bicolor S238N-H82] Length = 1291 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 76/207 (36%), Gaps = 30/207 (14%) Query: 23 FNSASKTVKCLQLANGAVYYD----------EEKHWKEVHDEKIKALEVIIEK--ANAAP 70 + + ++ + AN +D E ++ K+ L+ ++ + + Sbjct: 547 ISLLNIAMELKKAANHPYLFDGAEVRTDNNEETLKGLVMNSGKMVLLDKLLARLRQDGHR 606 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIP--LLFAHPAS 118 +++ L L L + +I +N P + Sbjct: 607 VLIFSQMVRMLDILSDYMSLRGYLHQRLDGMVASEARKKSIAHFNTPGSPDFAFLLSTRA 666 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL + ++ F W+ + + + R + G K V VY ++++T++E Sbjct: 667 GGLGINL-ETADTVIIFDSDWNPQN-----DLQAMARAHRIGQKSHVSVYRFVSKDTMEE 720 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 VL+R + K ++ ++N + H+ Sbjct: 721 DVLERAKKKMVLEYAIINQMDTSQAHL 747 >gi|115473675|ref|NP_001060436.1| Os07g0642400 [Oryza sativa Japonica Group] gi|23237908|dbj|BAC16482.1| putative RUSH-1alpha [Oryza sativa Japonica Group] gi|50509930|dbj|BAD30251.1| putative RUSH-1alpha [Oryza sativa Japonica Group] gi|113611972|dbj|BAF22350.1| Os07g0642400 [Oryza sativa Japonica Group] Length = 821 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 23/165 (13%) Query: 53 DEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++AL ++ + + ++ F L L+ T K Sbjct: 644 SSKVQALLKLLRRSQSEDPLSKSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRS 703 Query: 99 CTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+++ +L A + G G+NL + + F WW+ +E + R Sbjct: 704 EVIRQFGCVGPDSPTVLLASLKAAGAGVNLTA-ASTVYLFDPWWNPG-----VEEQAMDR 757 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V V LI +++I+E +L+ K + K Sbjct: 758 VHRIGQTKEVKVVRLIVKDSIEERMLELQERKKKLISGAFGRKKG 802 >gi|302789546|ref|XP_002976541.1| hypothetical protein SELMODRAFT_105336 [Selaginella moellendorffii] gi|300155579|gb|EFJ22210.1| hypothetical protein SELMODRAFT_105336 [Selaginella moellendorffii] Length = 788 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 63/240 (26%), Gaps = 55/240 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 + Y F R ++ + ++ + + Sbjct: 344 QMYTAFLRSETAQGSLAGSAKGSALAALTILKKICDHPLLLTKRATDDVVEGLEYLDSTD 403 Query: 43 ----------------DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL--- 81 E H KI L ++E +V L Sbjct: 404 IAAAEAMRKSLAGLAEPEPDSDGNKHSCKIVFLMALLENLVQEGHRTLVFAQTLKMLDII 463 Query: 82 ------ARLQKAFPQGRTL-DKDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNIL 132 R G+T + ++++ + G GL L + + Sbjct: 464 QEEITKRRYSFCRIDGKTKGSERQRIVEDFQTDGCTVSIFLLTSQVGGLGLTLTA-ADRV 522 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V W+ + Q ++R + G R V VY L+ T++E + ++ K + Sbjct: 523 VIVDPAWNPSKDNQSVDR-----AYRIGQLRDVIVYRLMTSGTLEEKIYRKQVFKGGLMK 577 >gi|297671222|ref|XP_002813740.1| PREDICTED: helicase ARIP4-like isoform 2 [Pongo abelii] Length = 1161 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + I ++N+ L + G+NL G N +V F Sbjct: 472 RNITYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 530 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ ++Y L+A T+++ + R +K + D +++ Sbjct: 531 SWNP-----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 585 Query: 198 LK 199 L Sbjct: 586 LN 587 >gi|297671220|ref|XP_002813739.1| PREDICTED: helicase ARIP4-like isoform 1 [Pongo abelii] Length = 1410 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + I ++N+ L + G+NL G N +V F Sbjct: 721 RNITYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 779 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ ++Y L+A T+++ + R +K + D +++ Sbjct: 780 SWNP-----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 834 Query: 198 LK 199 L Sbjct: 835 LN 836 >gi|126540715|emb|CAM46170.1| chromodomain helicase DNA binding protein 6 [Mus musculus] Length = 1184 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 70/237 (29%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + + L N + ++ + N + + Sbjct: 707 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSS 766 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 767 EASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 826 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 827 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-- 883 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 884 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKG 937 >gi|6324765|ref|NP_014834.1| Uls1p [Saccharomyces cerevisiae S288c] gi|74676476|sp|Q08562|ULS1_YEAST RecName: Full=ATP-dependent helicase ULS1; AltName: Full=Role in silencing protein 1; AltName: Full=Ubiquitin ligase for SUMO conjugates protein 1 gi|1420457|emb|CAA99400.1| unnamed protein product [Saccharomyces cerevisiae] gi|190407507|gb|EDV10774.1| SWI2/SNF2 DNA-dependent ATPase family member [Saccharomyces cerevisiae RM11-1a] gi|285815070|tpg|DAA10963.1| TPA: Uls1p [Saccharomyces cerevisiae S288c] Length = 1619 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 76/216 (35%), Gaps = 23/216 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCL-QLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + + + S+ K Q N V E ++ I+ ++ Sbjct: 1398 KLYDQVINQGFTE----EDLHAEYLSEMEKQKIQQKNVYVPNFESLEPSTKIEQCIQVIQ 1453 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEW-NEGK 108 + +++ II+ F + L+ + + I E+ + + Sbjct: 1454 RVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPE 1513 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L + GL L N +V +W+ +E R + + V V+ Sbjct: 1514 KRILLISMKAGNSGLTLT-CANHVVIVDPFWNP-----YVEEQAQDRCYRISQTKKVQVH 1567 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L ++++++ + + + K + D ++ K + ++ Sbjct: 1568 KLFIKDSVEDRISELQKRKKEMVDSAMDPGKIKEVN 1603 >gi|224013614|ref|XP_002296471.1| chromodomain-helicase [Thalassiosira pseudonana CCMP1335] gi|220968823|gb|EED87167.1| chromodomain-helicase [Thalassiosira pseudonana CCMP1335] Length = 690 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/241 (11%), Positives = 65/241 (26%), Gaps = 52/241 (21%) Query: 2 KQYHKFQRE--LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK---------- 49 + Y + + A + ++ + N D + + Sbjct: 337 QYYRAIFEHNHAFLSMGSSKAVAPKLMNIQMELRKCCNHPFLLDGIESREMEKRHEELSA 396 Query: 50 ---------------------EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 + K+ L+ ++ K +++ F L + Sbjct: 397 SGELDGKSPEEQHHILNEYGYVMSSGKMVLLDKLLPKLRQEGHKVLIFSQFVKMLDLISD 456 Query: 87 AFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + I + E + + G G+NL +I + F Sbjct: 457 YCDFREFRYERLDGRVRGNERQKAIDRFETEKDSFVFLLSTRAGGVGINLTA-ADICIIF 515 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + + R + G + V +Y L+ T ++ + R K ++ +L Sbjct: 516 DSDWNPQN-----DVQAQARCHRIGQTKDVMIYRLVTSRTFEQEMFDRASKKLGLEQAVL 570 Query: 196 N 196 Sbjct: 571 G 571 >gi|167533758|ref|XP_001748558.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773077|gb|EDQ86722.1| predicted protein [Monosiga brevicollis MX1] Length = 692 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 68/236 (28%), Gaps = 58/236 (24%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------------DEKIKAL 59 ++ + ++ N + K+ AL Sbjct: 399 SSKQDSQHVFQSLQFLRKVCNHPALALKSGTALAERVLTEVASAHHQPRDYQLSGKLVAL 458 Query: 60 EVIIEKAN---------------------AAPIIVAYHFNSDLAR-------------LQ 85 ++ + ++ + L Sbjct: 459 RQLLMECEIAGRSGDANADEADLARTAVGRHRALIFAQQRAFLDIVQEELLDKHLPEVTY 518 Query: 86 KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + G + + E+N + I +L + G GL L G + ++F W+ Sbjct: 519 RRLDGGVPAQQRHDIVVEFNEDPSIDVLLLTTSVGGLGLTLT-GADTVIFLEHDWNP--- 574 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 M + + R + G R V VY LI Q T++E ++ R K + D ++NA Sbjct: 575 --MKDLQAMDRAHRLGQTRVVNVYRLITQRTLEEKIMSLQRFKINVADTVVNAENA 628 >gi|147852279|emb|CAN82215.1| hypothetical protein VITISV_020421 [Vitis vinifera] Length = 1435 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 17/143 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + ++++N ++ ++ Sbjct: 1253 GEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSL 1312 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ + ++ LWW+ E + R + G R V V L ++T+ Sbjct: 1313 KAASLGLNMVAACH-VLLLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVLRLTVKDTV 1366 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 ++ +L + K + + Sbjct: 1367 EDRILALQQKKREMVASAFGEDE 1389 >gi|4056412|gb|AAC97986.1| BRG-1-HUMAN [AA 812-1440] [Homo sapiens] Length = 628 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 194 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 253 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 254 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 313 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 314 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 369 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 370 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 418 >gi|327351086|gb|EGE79943.1| DsDNA-dependent ATPase [Ajellomyces dermatitidis ATCC 18188] Length = 1011 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 71/218 (32%), Gaps = 44/218 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE----------------------KHWKEVHDEKIKA 58 + ++ +L N + +H KI+ Sbjct: 610 NSESALQLITILKKLCNSPSLLNPRNCDETPNSTLSALVSSLPPNILRHLSPSSSGKIRV 669 Query: 59 LEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ +++ ++ S L L K + ++N Sbjct: 670 LDQLLHNIRHTTSEKVVLISNYTSTLDLLATLLTSLSLPFLRLDGSTPASKRQGLVDDFN 729 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL G + LV F + W+ Q + RI + G K Sbjct: 730 RSSSSSVFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDMQAMARI-----HRDGQK 783 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R +Y L+ + ++E + QR TK + D +++ K Sbjct: 784 RHCRIYRLLLKGALEEKIWQRQVTKIGLADSVMDQKKG 821 >gi|301614708|ref|XP_002936822.1| PREDICTED: DNA excision repair protein ERCC-6-like [Xenopus (Silurana) tropicalis] Length = 1361 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/240 (14%), Positives = 65/240 (27%), Gaps = 51/240 (21%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-----------------DEE 45 Y KF ++ + + ++ +L + +EE Sbjct: 385 VYRKFI--SLDQIKELLMTTRSPLAELNILKKLCDHPRLLSARACIQLGLEGDDYHSNEE 442 Query: 46 KHWKEVHDEKIKALEVIIEK---------------ANAAPIIVAYHFNSDLAR------- 83 + V + E++IE+ +V L Sbjct: 443 GDHELVTKFDHLSDEILIEESGKLLLLIDLLHKLKEEGHRTLVFSQSRKMLDMIDRILQN 502 Query: 84 ---LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 L + I + +L G GL L + +V F W Sbjct: 503 KNFKVMRIDGTVALPEREKRISIFQSNNNYSVLLLTTQVGGVGLTLTA-ADRVVIFDPSW 561 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + V R + G + V +Y LI T++E + +R K ++ K Sbjct: 562 NPAT-----DAQAVDRAYRIGQQENVVIYRLITCGTVEEKIYRRQIFKESLIRQTTGDKK 616 >gi|151945478|gb|EDN63720.1| Member of the SWI/SNF family of DNA-dependent ATPases [Saccharomyces cerevisiae YJM789] Length = 1619 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 76/216 (35%), Gaps = 23/216 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCL-QLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + + + S+ K Q N V E ++ I+ ++ Sbjct: 1398 KLYDQVINQGFTE----EDLHAEYLSEMEKQKIQQKNVYVPNFESLEPSTKIEQCIQVIQ 1453 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEW-NEGK 108 + +++ II+ F + L+ + + I E+ + + Sbjct: 1454 RVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPE 1513 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L + GL L N +V +W+ +E R + + V V+ Sbjct: 1514 KRILLISMKAGNSGLTLT-CANHVVIVDPFWNP-----YVEEQAQDRCYRISQTKKVQVH 1567 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L ++++++ + + + K + D ++ K + ++ Sbjct: 1568 KLFIKDSVEDRISELQKRKKEMVDSAMDPGKIKEVN 1603 >gi|74691592|sp|Q74Z27|INO80_ASHGO RecName: Full=Putative DNA helicase INO80 Length = 1414 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K+K L+ ++ KA +++ + + +++ + + Sbjct: 1239 SAKLKKLDELLVRLKAGEHRVLIYFQMTRMMDLIEEYLTYRQYKHIRLDGSSKLEDRRDL 1298 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1299 VHDWQTKSDIFIFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1352 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V VY L+ + TI+E + R + K +Q +++ KE Sbjct: 1353 GQTKQVTVYRLLIKGTIEERMRDRAKQKEHVQQVVMEGKTKE 1394 >gi|299470515|emb|CBN78506.1| conserved unknown protein [Ectocarpus siliculosus] Length = 2647 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 66/214 (30%), Gaps = 27/214 (12%) Query: 4 YHKFQRELYCDLQGE--NIEAFNSASKTVKCLQ---LANGAVYYDEEKHWKEVHDEKIKA 58 Y + L + A + + ++ + N + + Sbjct: 937 YRAIYEKNTQFLFKGARPVHAPSLMNIMMELRKGGVCCNHPFLNRGVEERIL-----SEI 991 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---------DPCTIQEWNEGKI 109 + + KAN +V L G ++ ++ +N + Sbjct: 992 PDELHTKANVHKQLVDASGKDFLKGGVDGEGPGYKYERLDGNTRANMRTAAVERFNRPQF 1051 Query: 110 P--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ + G GLNL + ++ + W+ + R + G +AV V Sbjct: 1052 KRFVMLLSTRAGGLGLNLTT-ADTVIIYDSDWNP-----HNDLQAQARAHRIGQTKAVMV 1105 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Y L+++ T + + + K + +L + E Sbjct: 1106 YRLLSKKTYEMHMFHQASLKLGLDKAVLAHARSE 1139 >gi|290889290|gb|ADD69942.1| chromo-helicase DNA-binding protein [Zonotrichia albicollis] Length = 1785 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 33/224 (14%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + Sbjct: 706 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQH 765 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 766 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 825 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 826 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 879 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 880 RAHRIGQKKQVNIYRLVTKASVEEDILERAKKKMVLDHLVIQRM 923 >gi|259149676|emb|CAY86480.1| Uls1p [Saccharomyces cerevisiae EC1118] Length = 1619 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 76/216 (35%), Gaps = 23/216 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCL-QLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + + + S+ K Q N V E ++ I+ ++ Sbjct: 1398 KLYDQVINQGFTE----EDLHAEYLSEMEKQKIQQKNVYVPNFESLEPSTKIEQCIRVIQ 1453 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEW-NEGK 108 + +++ II+ F + L+ + + I E+ + + Sbjct: 1454 RVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPE 1513 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L + GL L N +V +W+ +E R + + V V+ Sbjct: 1514 KRILLISMKAGNSGLTLT-CANHVVIVDPFWNP-----YVEEQAQDRCYRISQTKKVQVH 1567 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L ++++++ + + + K + D ++ K + ++ Sbjct: 1568 KLFIKDSVEDRISELQKRKKEMVDSAMDPGKIKEVN 1603 >gi|239607133|gb|EEQ84120.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis ER-3] Length = 989 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 71/218 (32%), Gaps = 44/218 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE----------------------KHWKEVHDEKIKA 58 + ++ +L N + +H KI+ Sbjct: 589 NSESALQLITILKKLCNSPSLLNPRNCDETPNSTLSALVSSLPPNILRHLSPSSSGKIRV 648 Query: 59 LEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ +++ ++ S L L K + ++N Sbjct: 649 LDQLLHNIRHTTSEKVVLISNYTSTLDLLATLLTSLSLPFLRLDGSTPASKRQGLVDDFN 708 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL G + LV F + W+ Q + RI + G K Sbjct: 709 RSSSSSVFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDMQAMARI-----HRDGQK 762 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R +Y L+ + ++E + QR TK + D +++ K Sbjct: 763 RHCRIYRLLLKGALEEKIWQRQVTKIGLADSVMDQKKG 800 >gi|328772764|gb|EGF82802.1| hypothetical protein BATDEDRAFT_9456 [Batrachochytrium dendrobatidis JAM81] Length = 1238 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 84/227 (37%), Gaps = 38/227 (16%) Query: 1 MKQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYD----------EE 45 ++ Y + + L G+ + N A ++ + +N +D ++ Sbjct: 418 LEYYKAVFTKNFETLNRGTAGGKQVSLQNIA---MELKKASNHPYLFDGAEPPNMSREDQ 474 Query: 46 KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA-FPQGRTLDK------ 96 ++ K+ L+ ++ + +++ L L +G T + Sbjct: 475 LKGIIMNSGKMVLLDKLLASLHEGQHRVLIFSQMVRMLNILSDYLSYRGYTFQRLDGTTQ 534 Query: 97 ---DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +++ +N + G GLNL + ++ F W+ + + Sbjct: 535 SEVRKRSMEHFNAAGSTDFAFLLSTRAGGLGLNL-ATADTVILFDSDWNPQN-----DLQ 588 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + R + G K V VY ++++TI+E +++R + K ++ ++ + Sbjct: 589 AIARAHRIGQKNTVNVYRFLSKDTIEEDIIERAKRKMVLEYSIIKTM 635 >gi|290999423|ref|XP_002682279.1| predicted protein [Naegleria gruberi] gi|284095906|gb|EFC49535.1| predicted protein [Naegleria gruberi] Length = 1635 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 11/168 (6%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 + LQ G + K + D K ++I + + V F S Sbjct: 1319 KRLLQFDCGKLQ----KLSNLLKDLKRGGHRILIFTQMSKMLDVLESFMSMNGHSYFRLD 1374 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L++ ++ +N + KI S G G+NL G + ++F+ W+ + Sbjct: 1375 GQTKLEERQYMMERFNTDPKIFAFILSTRSGGVGINLT-GADTVIFYDSDWNPA-----M 1428 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G R V +Y LI+++TI+E +L + K + +++++ Sbjct: 1429 DAQAQDRCHRIGQTRNVNIYRLISESTIEERILLKANQKRHMNEIVIH 1476 >gi|261201037|ref|XP_002626919.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis SLH14081] gi|239593991|gb|EEQ76572.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis SLH14081] Length = 999 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 71/218 (32%), Gaps = 44/218 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE----------------------KHWKEVHDEKIKA 58 + ++ +L N + +H KI+ Sbjct: 589 NSESALQLITILKKLCNSPSLLNPRNCDETPNSTLSALVSSLPPNILRHLSPSSSGKIRV 648 Query: 59 LEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ +++ ++ S L L K + ++N Sbjct: 649 LDQLLHNIRHTTSEKVVLISNYTSTLDLLATLLTSLSLPFLRLDGSTPASKRQGLVDDFN 708 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL G + LV F + W+ Q + RI + G K Sbjct: 709 RSSSSSVFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPATDMQAMARI-----HRDGQK 762 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R +Y L+ + ++E + QR TK + D +++ K Sbjct: 763 RHCRIYRLLLKGALEEKIWQRQVTKIGLADSVMDQKKG 800 >gi|194389260|dbj|BAG65618.1| unnamed protein product [Homo sapiens] Length = 1161 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + I ++N+ L + G+NL G N +V F Sbjct: 472 RNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 530 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ ++Y L+A T+++ + R +K + D +++ Sbjct: 531 SWNP-----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 585 Query: 198 LK 199 L Sbjct: 586 LN 587 >gi|168823443|ref|NP_055921.2| helicase ARIP4 [Homo sapiens] gi|296439458|sp|Q9Y4B4|ARIP4_HUMAN RecName: Full=Helicase ARIP4; AltName: Full=Androgen receptor-interacting protein 4; AltName: Full=RAD54-like protein 2 Length = 1467 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + I ++N+ L + G+NL G N +V F Sbjct: 778 RNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 836 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ ++Y L+A T+++ + R +K + D +++ Sbjct: 837 SWNP-----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 891 Query: 198 LK 199 L Sbjct: 892 LN 893 >gi|119585552|gb|EAW65148.1| hCG1997495, isoform CRA_d [Homo sapiens] Length = 1415 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + I ++N+ L + G+NL G N +V F Sbjct: 726 RNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 784 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ ++Y L+A T+++ + R +K + D +++ Sbjct: 785 SWNP-----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 839 Query: 198 LK 199 L Sbjct: 840 LN 841 >gi|114587116|ref|XP_001169759.1| PREDICTED: RAD54-like 2 isoform 1 [Pan troglodytes] gi|114587118|ref|XP_001169781.1| PREDICTED: RAD54-like 2 isoform 2 [Pan troglodytes] Length = 1467 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + I ++N+ L + G+NL G N +V F Sbjct: 778 RNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 836 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ ++Y L+A T+++ + R +K + D +++ Sbjct: 837 SWNP-----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 891 Query: 198 LK 199 L Sbjct: 892 LN 893 >gi|109039362|ref|XP_001096767.1| PREDICTED: helicase ARIP4 [Macaca mulatta] Length = 1467 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + I ++N+ L + G+NL G N +V F Sbjct: 778 RNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 836 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ ++Y L+A T+++ + R +K + D +++ Sbjct: 837 SWNP-----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 891 Query: 198 LK 199 L Sbjct: 892 LN 893 >gi|60688369|gb|AAH90481.1| Hells protein [Danio rerio] Length = 252 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 17/143 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHP 116 +++ S L L D+D + ++ ++ L Sbjct: 30 GHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVFLFLLST 89 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL + ++ F W+ + + R + G + V VY LI NTI Sbjct: 90 RAGGLGINLTS-ADTVIIFDSDWNPQA-----DLQAQDRCHRIGQTKPVVVYRLITANTI 143 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 DE +L+R K ++ ++++ K Sbjct: 144 DEKILERASAKRKLEKMVIHKNK 166 >gi|18999468|gb|AAH24298.1| RAD54-like 2 (S. cerevisiae) [Homo sapiens] gi|123982750|gb|ABM83116.1| RAD54-like 2 (S. cerevisiae) [synthetic construct] gi|123997421|gb|ABM86312.1| RAD54-like 2 (S. cerevisiae) [synthetic construct] Length = 1359 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + I ++N+ L + G+NL G N +V F Sbjct: 670 RNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 728 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ ++Y L+A T+++ + R +K + D +++ Sbjct: 729 SWNP-----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 783 Query: 198 LK 199 L Sbjct: 784 LN 785 >gi|20521664|dbj|BAA34529.2| KIAA0809 protein [Homo sapiens] Length = 1385 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + I ++N+ L + G+NL G N +V F Sbjct: 696 RNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDA 754 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ ++Y L+A T+++ + R +K + D +++ Sbjct: 755 SWNP-----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDD 809 Query: 198 LK 199 L Sbjct: 810 LN 811 >gi|324502582|gb|ADY41136.1| Chromodomain-helicase-DNA-binding protein 1-like protein [Ascaris suum] Length = 1035 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 67/217 (30%), Gaps = 27/217 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-------KHWKEVHDE 54 K Y + + + + + A +D Sbjct: 264 KNYRFLSAAGCAQGDHQGGSRNSLVNIMTQLRKCALHPYLFDGMEPEPFKEGEHLATSSG 323 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC----------TIQ 102 K+ LE I+ + + +++ L +Q F R + I Sbjct: 324 KMMLLERILGFLRKHKHRVLLFSQMTRMLDIVQDYFNYRRWSFERLDGKLKADMRFTAID 383 Query: 103 EWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + G GL L G + ++F ++ + + R + G Sbjct: 384 NFQKSDSDVFCFLLSTRAGGLGLTLT-GADTVIFIDSDFNPQN-----DIQAAARCHRIG 437 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V + L+ +NT++E++ K + + ++ + Sbjct: 438 QTKHVKIIRLVTKNTVEEVIECYATRKLRMTNRVMES 474 >gi|300121515|emb|CBK22034.2| unnamed protein product [Blastocystis hominis] Length = 508 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 66/195 (33%), Gaps = 28/195 (14%) Query: 28 KTVKCLQLANGAVYYDEEKHWKE---------VHDEKIKALEVIIEK--ANAAPIIVAYH 76 + QL + EEK K+ L+ +++ ++V Sbjct: 311 RMQILRQLVSHPYNVYEEKSSSGSYITDESIIQKSSKLTLLDNLLKVLIPKGHRVLVFVQ 370 Query: 77 FNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 F L L+ D+D + IP+ S G G+NL Sbjct: 371 FVETLHLLEDYCTFRGYENCSIHGSTLQSDRDQEIKDFQSREDIPIFLLTTRSGGLGINL 430 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ + W+ ++ + + R + G KR V VY + T+D +L+ Sbjct: 431 -SAADTVILYDSDWNPQQ-----DIQAMDRAHRLGQKRDVVVYRFVTLGTMDVQLLKIAE 484 Query: 186 TKSTIQDLLLNALKK 200 K ++ ++ + + Sbjct: 485 EKRKLERIVTHHDRA 499 >gi|66360055|ref|XP_627205.1| Swr1p like SWI/SNF2 family ATpase with a HSA domain at the N-terminus probably involved in chromatin remodelling [Cryptosporidium parvum Iowa II] gi|46228613|gb|EAK89483.1| Swr1p like SWI/SNF2 family ATpase with a HSA domain at the N-terminus probably involved in chromatin remodelling [Cryptosporidium parvum Iowa II] Length = 1371 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 68/169 (40%), Gaps = 19/169 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------G 91 + E K + L ++ K I+ + L L+ Sbjct: 1029 PPRRIIEDDCGKFQILSRLLHKLFNEGHRCIIFTQMSKMLDVLESFINYRGYNYLRLDGS 1088 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D + +N + +I L + S G GLNL G + ++F+ W+ ++R Sbjct: 1089 TKVDDRQKLVNRFNRDQRIYLFISSTRSGGVGLNLT-GADTVIFYDSDWNPA-----MDR 1142 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G R V +Y L+++ TI+E + ++ K + D++++ + Sbjct: 1143 QAMDRCHRIGQTRDVNIYRLVSEWTIEESIFKKQLQKRLLDDVVVDQGR 1191 >gi|320584169|gb|EFW98380.1| helicase, putative [Pichia angusta DL-1] Length = 1498 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 66/198 (33%), Gaps = 19/198 (9%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAP 70 ++ Q +K + K++ L +++ Sbjct: 1169 LEIPEPVQNEIRQLKLDNPFHQAQIKLSITFPDKSLLQYDCGKLQKLASLLQDLIPKGHR 1228 Query: 71 IIVAYHFNSDLAR-LQKAFPQGRTLDK---------DPCTIQEWN-EGKIPLLFAHPASC 119 +++ L + G + + +N + KI S Sbjct: 1229 VLIFTQMTKVLDILEKFMNYNGYKYMRLDGATKIEDRQLLTERFNKDPKIKCFILSTRSG 1288 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL G + ++F+ W+ +++ R + G R V +Y +++ TI+ Sbjct: 1289 GLGINLT-GADTVIFYDSDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESN 1342 Query: 180 VLQRLRTKSTIQDLLLNA 197 +L++ K + ++++ Sbjct: 1343 ILKKANQKRQLDNVVIQE 1360 >gi|168012254|ref|XP_001758817.1| SNF2 family DNA-dependent ATPase domain-containing protein [Physcomitrella patens subsp. patens] gi|162689954|gb|EDQ76323.1| SNF2 family DNA-dependent ATPase domain-containing protein [Physcomitrella patens subsp. patens] Length = 1437 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 66/192 (34%), Gaps = 15/192 (7%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 ++L Q E +E +K L + V + + L++I Sbjct: 1038 KDLIDGQQREVLELSGKMVILMKIL------SLSSVKSDKALVFSQSLHTLDLIEVFLAN 1091 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNL 125 P + + N R + ++ +N+ + + + G+NL Sbjct: 1092 MPCLNGWKGNWVKNRDWYRLDGQTSAKSRQELVERFNDPDNTSVQCVLISTRAGSLGINL 1151 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N ++ F W+ + + R + G K+ V+ Y L+A T++E + R Sbjct: 1152 PA-ANRVIIFDGSWNPTH-----DLQALFRAWRFGQKKNVYAYRLLASGTMEEKIYNRQV 1205 Query: 186 TKSTIQDLLLNA 197 K + +L+ Sbjct: 1206 AKEGLAARVLDE 1217 >gi|115492543|ref|XP_001210899.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114197759|gb|EAU39459.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1329 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 45/215 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE-----------------------KHWKEVHDEKIK 57 A ++ +L N + +H+ K++ Sbjct: 562 NAESALQLITILKKLCNSPSLLSPKNNKDQAPSETVAALLASLPSNLLRHFSPSSSAKVR 621 Query: 58 ALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 L+ ++ K + + I++ ++ S L L K ++++ Sbjct: 622 VLDQLLYKLHTTTSEKIVLVSNYTSTLNLLATLLTALSLPFLRLDGSTPAQKRQSLVEDF 681 Query: 105 N---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N + + G GLNL G + LV F + W+ + + R + G Sbjct: 682 NRLPADRSFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT-----DIQAMARIHRDGQ 735 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KRA +Y ++ + +++E + QR TK + D ++ Sbjct: 736 KRACRIYRILLKGSLEEKIWQRQVTKLGLADSVME 770 >gi|72386767|ref|XP_843808.1| transcription activator [Trypanosoma brucei TREU927] gi|62359823|gb|AAX80252.1| transcription activator, putative [Trypanosoma brucei] gi|70800340|gb|AAZ10249.1| transcription activator, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 948 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 59/160 (36%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPC 99 K+ L+ ++ + N ++ +F L LQ + Sbjct: 520 PSGKMIELDRMLREFHMNGHRCLIFSNFTCVLDLLQGLCILRDYSHERIDGSAQRVEREL 579 Query: 100 TIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ +N + S G G+ L G +I++ F ++ + ++R R Sbjct: 580 SMARFNGPASKVFVFLISTMSGGVGITLT-GADIVILFDANFNPQ-----MDRQAADRAH 633 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V+ L + T++E + + ++ + +++ Sbjct: 634 RIGQTRTVRVFRLCCKETVEERIQDIALRRLSLGEFVVDG 673 >gi|317063195|ref|ZP_07927680.1| SWF/SNF family helicase [Fusobacterium ulcerans ATCC 49185] gi|313688871|gb|EFS25706.1| SWF/SNF family helicase [Fusobacterium ulcerans ATCC 49185] Length = 926 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 79/213 (37%), Gaps = 28/213 (13%) Query: 2 KQYHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + Y + G F + Q+ + E V K Sbjct: 706 KLYEERRSYYYKMVNSQIRENGIGKTQFFILQALNELRQITS-----CPEAKSNGVTSSK 760 Query: 56 IKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAF--PQGRTLDKDPCTIQEW 104 + L I + N ++V ++ DL R + G T D+ + Sbjct: 761 REVLVNNIVEAVENGHKVLVFTNYINSIENICEDLKRYGINYLSMTGSTKDRQSLVDRFQ 820 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + K + + G GLNL + + + WW+ + +E + R + G R Sbjct: 821 KDNKYKVFIMTLKTGGVGLNLTA-ADTIFIYDPWWN-----KTVENQAIDRAYRLGQDRT 874 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VF Y LI ++TI+E +LQ TKS + D L++ Sbjct: 875 VFSYKLILKDTIEEKILQLQDTKSKLLDNLISE 907 >gi|156523172|ref|NP_001096000.1| DNA excision repair protein ERCC-6-like [Bos taurus] gi|182645386|sp|A6QQR4|ERC6L_BOVIN RecName: Full=DNA excision repair protein ERCC-6-like; AltName: Full=ATP-dependent helicase ERCC6-like gi|151554062|gb|AAI49964.1| ERCC6L protein [Bos taurus] gi|296470840|gb|DAA12955.1| DNA excision repair protein ERCC-6-like [Bos taurus] Length = 1242 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 67/245 (27%), Gaps = 55/245 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------------ 43 + Y KF ++ +E + ++ +L + Sbjct: 379 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACGLLNLGAAKFSVQD 436 Query: 44 --------EEKHWKEVH-------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL-- 84 + H ++ K+ L +++K +V L + Sbjct: 437 EIEGEDSSDVDHIDQISDDTLMEESGKMLFLMDLLKKLRDEGHQTLVFSQSRRILNIIER 496 Query: 85 ----------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + ++++ + G GL L + +V Sbjct: 497 LLKNRHFKILRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGVGLTLTA-ASRVVI 555 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 556 FDPSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQT 610 Query: 195 LNALK 199 K Sbjct: 611 TGDKK 615 >gi|67522999|ref|XP_659560.1| hypothetical protein AN1956.2 [Aspergillus nidulans FGSC A4] gi|40745965|gb|EAA65121.1| hypothetical protein AN1956.2 [Aspergillus nidulans FGSC A4] gi|259487315|tpe|CBF85892.1| TPA: chromatin remodeling complex subunit (Chd3), putative (AFU_orthologue; AFUA_4G13440) [Aspergillus nidulans FGSC A4] Length = 1443 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 68/198 (34%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEKAN--AAPIIVAY 75 ++ + + + + K++ LE+++ K ++V Sbjct: 886 LMQLRKCLCHPFIFSKAIEERTDDPEVAHRNLVDAAGKLQLLELMLPKLQARGHRVLVFS 945 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F +L ++ + I ++N P S G G+ Sbjct: 946 QFLENLDVMEDFLDGLGLPHRRLDGRMTSLEKQRMIDDYNAENSPYFAFLLSTRSGGVGI 1005 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + ++R + G K V V+ L+ + + +E ++Q Sbjct: 1006 NL-ATADTVIIMDPDFNPHQDM-----QALSRAHRIGQKNKVLVFQLMIRGSAEEKIMQI 1059 Query: 184 LRTKSTIQDLLLNALKKE 201 R K + +L++ + E Sbjct: 1060 GRKKMVLDHVLIDRMAAE 1077 >gi|302309580|ref|NP_987045.2| AGR379Wp [Ashbya gossypii ATCC 10895] gi|299788425|gb|AAS54869.2| AGR379Wp [Ashbya gossypii ATCC 10895] Length = 1414 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K+K L+ ++ KA +++ + + +++ + + Sbjct: 1239 SAKLKKLDELLVRLKAGEHRVLIYFQMTRMMDLIEEYLTYRQYKHIRLDGSSKLEDRRDL 1298 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1299 VHDWQTKSDIFIFLLSTRAGGLGINLTS-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1352 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V VY L+ + TI+E + R + K +Q +++ KE Sbjct: 1353 GQTKQVTVYRLLIKGTIEERMRDRAKQKEHVQQVVMEGKTKE 1394 >gi|297843648|ref|XP_002889705.1| ATRX/CHR20 [Arabidopsis lyrata subsp. lyrata] gi|297335547|gb|EFH65964.1| ATRX/CHR20 [Arabidopsis lyrata subsp. lyrata] Length = 1483 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 16/120 (13%) Query: 96 KDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + +NE ++ + G+NL Y N ++ W+ + Sbjct: 1189 ERQKLVDRFNEPDNKRVKCTLISTRAGSLGINL-YAANRVIIVDGSWNPT-----YDLQA 1242 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-------KKETIHV 205 + R + G K+ VF Y L+A+ TI+E + +R TK + +++ K+E +H+ Sbjct: 1243 IFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 1302 >gi|325118669|emb|CBZ54220.1| hypothetical protein NCLIV_046520 [Neospora caninum Liverpool] Length = 1703 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 16/153 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEW 104 + L I + +V F S L ++ +G + Sbjct: 1537 YQELLDIEREDTTVKSLVFSQFCSMLDLIEWRLKKGGIHCAKLVGSMSIVSRSNVLYAFN 1596 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + +L + G GLNLQ + + WW+ Q I+R QRQ + Sbjct: 1597 NDPSLKVLLISLKAGGEGLNLQ-IASRIFLMDPWWNPAAEMQAIQRAHRIGQRQ----KE 1651 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V IA+ TI+E +LQ K + D + A Sbjct: 1652 VIAVRFIAEKTIEERILQLQEKKQLVFDGTVGA 1684 >gi|151941373|gb|EDN59744.1| conserved protein [Saccharomyces cerevisiae YJM789] Length = 1131 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 68/189 (35%), Gaps = 23/189 (12%) Query: 32 CLQLANGAVYY---DEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ 85 +L + + + + KI AL+ +++ +++ F L L+ Sbjct: 924 LHKLCCNFPNTLSKYQLHNDEWMQSGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILE 983 Query: 86 K----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++ I ++ + IP+ + G G+NL N ++ Sbjct: 984 MVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINL-VCANNVII 1042 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F ++ + +R R + G + V + LI +++I+E + Q + K + + Sbjct: 1043 FDQSFNPHD-----DRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYI 1097 Query: 195 LNALKKETI 203 K + + Sbjct: 1098 SEDKKSQDV 1106 >gi|67515813|ref|XP_657792.1| hypothetical protein AN0188.2 [Aspergillus nidulans FGSC A4] gi|40746905|gb|EAA66061.1| hypothetical protein AN0188.2 [Aspergillus nidulans FGSC A4] Length = 1123 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 67/201 (33%), Gaps = 31/201 (15%) Query: 29 TVKCLQLANGAVYYDE-------EKHWKEVHDEKIKALEVIIEKANA---APIIVAYHFN 78 ++ + + + K L+ +I + +I+ F+ Sbjct: 774 LMELRKCSIHPYLLADALPKEYNIGQHIVDASCKFIVLQKMIRQYVGLENKKVIIFSGFD 833 Query: 79 SDLARLQKAFPQGRTLD---------------KDPCTIQEWNEGKIPLLFAHPASCGHGL 123 L + + ++ N+ + + + G GL Sbjct: 834 QTLDLCEDLLEMEKAQFSFKYGRLDGSTSSAWRNLSVFLFQNDPRYMVFLLSTRAGGEGL 893 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL +I++F W+ + + R +R + G + V ++ + A+ T+++ + +R Sbjct: 894 NLVS-SSIVIFLDDDWNPQ-----VMRQAESRVHRIGQTQPVQIFRIHAKGTVEDQMRRR 947 Query: 184 LRTKSTIQDLLLNALKKETIH 204 + K+ + D ++ H Sbjct: 948 MDKKAYLADKVMGEFGNNITH 968 >gi|186492175|ref|NP_001117525.1| EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding [Arabidopsis thaliana] gi|332195667|gb|AEE33788.1| SNF2, helicase and zinc finger domain-containing protein [Arabidopsis thaliana] Length = 1122 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 52/154 (33%), Gaps = 17/154 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE- 106 + K IV + L L+ + + +Q++N Sbjct: 955 MSVDVPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL 1014 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ ++ + GLN+ + ++ LWW+ E + R + G R V Sbjct: 1015 PEVTVMIMSLKAASLGLNMVAACH-VLMLDLWWNPTT-----EDQAIDRAHRIGQTRPVT 1068 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V ++T+++ +L + K + +K Sbjct: 1069 VVRFTVKDTVEDRILALQQKKRMMVASAFGEDEK 1102 >gi|186492170|ref|NP_176309.2| EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding [Arabidopsis thaliana] gi|332195665|gb|AEE33786.1| SNF2, helicase and zinc finger domain-containing protein [Arabidopsis thaliana] Length = 1280 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 52/154 (33%), Gaps = 17/154 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE- 106 + K IV + L L+ + + +Q++N Sbjct: 1113 MSVDVPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL 1172 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ ++ + GLN+ + ++ LWW+ E + R + G R V Sbjct: 1173 PEVTVMIMSLKAASLGLNMVAACH-VLMLDLWWNPTT-----EDQAIDRAHRIGQTRPVT 1226 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V ++T+++ +L + K + +K Sbjct: 1227 VVRFTVKDTVEDRILALQQKKRMMVASAFGEDEK 1260 >gi|221508291|gb|EEE33878.1| helicase, putative [Toxoplasma gondii VEG] Length = 998 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 62/187 (33%), Gaps = 23/187 (12%) Query: 29 TVKCLQLAN--GAVYYDEEKHWKEVHDE-----KIKALEVIIEKANAAPIIVAYHFNSDL 81 + LQ A G ++ E + L I + +V F S L Sbjct: 798 LSRLLQQAGKRGPDGIMQKIKASEFRSSTKIEALYQELLEIEREDTTVKSLVFSQFCSML 857 Query: 82 ARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 ++ +G + N+ + +L + G GLNLQ + Sbjct: 858 DLIEWRLKKGGIHCAKMVGSMSIVSRSNVLYAFNNDPSLKVLLISLKAGGEGLNLQ-IAS 916 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + WW+ Q I+R QR + V IA+ TI+E +LQ K + Sbjct: 917 RIFLMDPWWNPAAEMQAIQRAHRIGQRH----KEVIAIRFIAEKTIEERILQLQEKKQLV 972 Query: 191 QDLLLNA 197 D + A Sbjct: 973 FDGTVGA 979 >gi|170033270|ref|XP_001844501.1| chromo domain protein 1 [Culex quinquefasciatus] gi|167873908|gb|EDS37291.1| chromo domain protein 1 [Culex quinquefasciatus] Length = 881 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 66/186 (35%), Gaps = 21/186 (11%) Query: 31 KCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 K LQL +Y V K + L+ ++ K + +++ F L ++ Sbjct: 661 KLLQLKEKYTSLYDLHIPEKLIVASGKFRQLDELLPKLKSEGHRVLIFSQFVMMLDIMEH 720 Query: 87 AFPQGRTLD----------KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + I + + I + + G G+NL + ++ Sbjct: 721 YLKIRKHGFLRLDGQTAVTDRQEMIDLYTQDPNIFVFLLSTKAGGLGINLTA-ADTVIIH 779 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ ++ R + G + V +Y L+++ TI+E +L + K ++ + Sbjct: 780 DIDFNP-----YNDKQAEDRAHRMGQTKPVTIYKLVSEGTIEEGMLMIAQEKLQLEKEVT 834 Query: 196 NALKKE 201 + + Sbjct: 835 EDGENK 840 >gi|327308268|ref|XP_003238825.1| chromatin remodeling complex subunit Chd3 [Trichophyton rubrum CBS 118892] gi|326459081|gb|EGD84534.1| chromatin remodeling complex subunit Chd3 [Trichophyton rubrum CBS 118892] Length = 1376 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 66/206 (32%), Gaps = 31/206 (15%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-------------VIIE 64 + E N + ++ + Y + + V+ + + Sbjct: 801 KQSERHNLNNILMQLRKCLCHPFVYSKAIEDRGVNSTLLHRNMVEASAKLQLLELLLPKL 860 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLL-- 112 + +++ F L ++ T K I +N Sbjct: 861 QKRGHRVLIFSQFLDFLDIVEDFLDGLGLEHLRLDGSMTSLKKQKNIDAYNAPGSEYFAF 920 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ ++ + + ++R + G K+ V V+ L+ Sbjct: 921 LLSTRAGGVGINL-ATADTVIILDPDFNPHQ-----DIQALSRAHRIGQKKKVMVFQLMT 974 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 + + +E ++Q + K + +L+ + Sbjct: 975 RGSAEEKIMQIGKKKMALDHVLIERM 1000 >gi|302774573|ref|XP_002970703.1| hypothetical protein SELMODRAFT_411494 [Selaginella moellendorffii] gi|300161414|gb|EFJ28029.1| hypothetical protein SELMODRAFT_411494 [Selaginella moellendorffii] Length = 1538 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/231 (11%), Positives = 68/231 (29%), Gaps = 36/231 (15%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + DL + + V+ + N ++ H + Sbjct: 696 QYYKWILERNFSDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGANATMTDNSR 755 Query: 61 -----------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 ++ K +++ L L + Sbjct: 756 VQRVVLSSGKLVLLDKLLVRLKETGHRVLIFSQMVKMLDILADYLRLRGFQFQRLDGSTK 815 Query: 98 ----PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N + G G+NL + ++ F W+ + + Sbjct: 816 HHLRQQAMEHFNAPGSEDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQ 869 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++R + G + V +Y + +++E +L+R + K + L++ L + Sbjct: 870 AMSRAHRIGQEFVVNIYRFVTCRSVEEDILERAKKKMVLDHLVIQKLNAQG 920 >gi|254571325|ref|XP_002492772.1| Putative ATPase containing the DEAD/H helicase-related sequence motif [Pichia pastoris GS115] gi|238032570|emb|CAY70593.1| Putative ATPase containing the DEAD/H helicase-related sequence motif [Pichia pastoris GS115] gi|328353220|emb|CCA39618.1| hypothetical protein PP7435_Chr3-0661 [Pichia pastoris CBS 7435] Length = 805 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 74/209 (35%), Gaps = 33/209 (15%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------HDEKIKALEVIIE----- 64 I ++ ++ + + + + + K++ L ++ Sbjct: 512 SQILKKKLSNLVMQLRLICDSPFLFFDPWEDDQPLDFKKIVRESSKMQMLAQLLPRLLDS 571 Query: 65 ----KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIP 110 +++ F + ++ + + ++ ++ + I Sbjct: 572 KKSPDGKKHKVLIFCQFTKMMDLVEMWCQEENYSTYRIDGTTSQEERAGMVKGFATKDID 631 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + S G G+NL + ++ F W+ + ++ + R + G + V +Y L Sbjct: 632 IFLLSTRSGGLGINLTA-SDTVILFDSDWNPQ-----VDLQAIDRVHRIGQTQPVIIYRL 685 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 NTI++++L R +K ++ L+++ K Sbjct: 686 CNINTIEQVLLARADSKRRLERLVISMGK 714 >gi|225447045|ref|XP_002269303.1| PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Vitis vinifera] Length = 989 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 55/156 (35%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTI 101 D + + ++E+ +A IV F S L + + + +D Sbjct: 821 DALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLQKSGITCVQLVGSMSMAARDAAIS 880 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + NE + + G LNL + + WW+ +ER R + G Sbjct: 881 RFTNEPDCKIFLMSLKAGGVALNLT-VASHVFLMDPWWNPA-----VERQAQDRIHRIGQ 934 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + + + TI+E +L+ K + + + Sbjct: 935 YKPIRIVRFVIEKTIEERILKLQEKKELVFEGTVGG 970 >gi|159467545|ref|XP_001691952.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158278679|gb|EDP04442.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 1254 Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 53/145 (36%), Gaps = 9/145 (6%) Query: 52 HDEKIKALEVIIEKANAAPIIVAY--HFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGK 108 H K+ AL I+ ++ + G +Q +N + Sbjct: 1111 HAPKLAALRDILATCGHKALLDLVERDLLAPYGVSYLRLDGGVEAGARFAVVQRFNADPT 1170 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I +L G GLNL + +VF W+ + + R + G +R V VY Sbjct: 1171 IDVLLLTTGVGGVGLNLTA-ADTVVFLEHDWNPMKDM-----QAMDRAHRLGQRRTVNVY 1224 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDL 193 ++ + T++E VL + K + + Sbjct: 1225 RILTRGTLEERVLGLQQFKKDVAEA 1249 >gi|302764218|ref|XP_002965530.1| hypothetical protein SELMODRAFT_84809 [Selaginella moellendorffii] gi|300166344|gb|EFJ32950.1| hypothetical protein SELMODRAFT_84809 [Selaginella moellendorffii] Length = 971 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 78/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 K Q+ Y L ++++A N+ + ++ + N + Sbjct: 348 KMQKHYYGSLLQKDLDAINTGGERRRLLNIAMQLKKCCNHPYLFQGAEPGPPYLSGEHLV 407 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ + Sbjct: 408 ENSGKMVLLDKLLPKLKQRDSRVLIFSQMTRLLDILEDYCIYRTYQYCRIDGKTSGEERE 467 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N+ L + G G+NL +I++ + W+ + + R Sbjct: 468 AAIESFNKEGSEKFLFLLSTRAGGLGINL-ATADIVILYDSDWNPQA-----DLQAQDRA 521 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 522 HRIGQKKEVQVFRFCTELTIEEKVIERAYKKLALDALVIQQGR 564 >gi|154338690|ref|XP_001565567.1| DNA repair protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062619|emb|CAM39061.1| putative DNA repair protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1099 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 62/163 (38%), Gaps = 18/163 (11%) Query: 47 HWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAF----------PQGRTLD 95 K +H K+ A+ IE+ ++V F S L +Q TL Sbjct: 924 PQKPLHGTKLDAIADYIERVPKDEKVVVFSQFGSMLDLMQYWLQRRFIKAVKLCGSLTLT 983 Query: 96 KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +Q + ++ + ++ + G GLNLQ N +V WW+ V Sbjct: 984 QRQSVLQAFLHDRSVRVILISLKAGGEGLNLQ-VANHVVLTDPWWNPAVEM-----QAVQ 1037 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V + +++++E ++ K + + ++ Sbjct: 1038 RAHRIGQTRPVHAVRFVTEHSVEERMVDLQEKKMLVFEGTIDG 1080 >gi|58270542|ref|XP_572427.1| chromosome organization and biogenesis -related protein [Cryptococcus neoformans var. neoformans JEC21] gi|134118014|ref|XP_772388.1| hypothetical protein CNBL2540 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255001|gb|EAL17741.1| hypothetical protein CNBL2540 [Cryptococcus neoformans var. neoformans B-3501A] gi|57228685|gb|AAW45120.1| chromosome organization and biogenesis -related protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 939 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 17/167 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 Y + + + E + KA +++ F L L+ A Sbjct: 739 HKYALDPEVFLEGGKVMAMVKHIERCKAEGKRMLLFSQFVMILDILEGALNHLGIRYTRL 798 Query: 91 --GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D+ + E+N+ I + + G G+NL +++V + ++ Sbjct: 799 DGQTKTDERQGLVDEFNDDTDITVFLLSTKAGGVGINLTA-ASVVVIYDQDFNP-----H 852 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +R R + G +R V V LI +N+IDE +L+ TK + D++ Sbjct: 853 NDRQAADRAYRIGQERKVEVIKLITKNSIDEDMLEIGLTKLQLDDMV 899 >gi|255724726|ref|XP_002547292.1| TATA-binding protein associated factor MOT1 [Candida tropicalis MYA-3404] gi|240135183|gb|EER34737.1| TATA-binding protein associated factor MOT1 [Candida tropicalis MYA-3404] Length = 648 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 77/258 (29%), Gaps = 69/258 (26%) Query: 2 KQYHKF---QRELY-CDLQGENIE-AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y F Q+E ++QG E + +L N +H K K Sbjct: 300 KLYKDFAKSQKESIKSEVQGSEKEGKTHVFQALQYMRKLCNHPSLVMSPQHPKYPEINKF 359 Query: 57 -----KALEVIIEKA---------------------------------------NAAPII 72 +L+ I + + Sbjct: 360 LVSRNSSLDDIEHAPKLLSLKNLLLECGIGTQDSDYNKSTKKKNQQLISAEGVISQHRAL 419 Query: 73 VAYHFNSDLARLQ-------------KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 + L ++ ++++N + I +L Sbjct: 420 IFCQLKDMLDMVENDLLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNEDPSIDVLLLTTKV 479 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL G + ++F W+ M + + R + G K+ V VY LI ++T++E Sbjct: 480 GGLGLNLT-GADTVIFVEHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRLITKDTLEE 533 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ + K I ++N Sbjct: 534 KIMGLQKFKMNIASTIVN 551 >gi|260942857|ref|XP_002615727.1| hypothetical protein CLUG_04609 [Clavispora lusitaniae ATCC 42720] gi|238851017|gb|EEQ40481.1| hypothetical protein CLUG_04609 [Clavispora lusitaniae ATCC 42720] Length = 343 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 68/177 (38%), Gaps = 11/177 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + K +HD +I + + F + Sbjct: 63 KLSVAFPDKQLLQYDCGKLQ----KLATLLHDLVANGHRALIFTQMTKVLDILEQFLNFR 118 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ +++N + KIP+ S G G+NL G + ++F+ W+ Sbjct: 119 GYRYMRLDGATKIEDRQLMTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWN 177 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ R + G R V +Y +++ TI+ +L++ K + ++++ Sbjct: 178 PA-----MDKQCQDRCHRIGQMRDVHIYRFVSEYTIESNILKKANQKRQLDNVVIQE 229 >gi|261326898|emb|CBH09871.1| transcription activator, putative [Trypanosoma brucei gambiense DAL972] Length = 948 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 59/160 (36%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPC 99 K+ L+ ++ + N ++ +F L LQ + Sbjct: 520 PSGKMIELDRMLREFHMNGHRCLIFSNFTCVLDLLQGLCILRDYSHERIDGSAQRVEREL 579 Query: 100 TIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ +N + S G G+ L G +I++ F ++ + ++R R Sbjct: 580 SMARFNGPASKVFVFLISTMSGGVGITLT-GADIVILFDANFNPQ-----MDRQAADRAH 633 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V+ L + T++E + + ++ + +++ Sbjct: 634 RIGQTRTVRVFRLCCKETVEERIQDIALRRLSLGEFVVDG 673 >gi|153792503|ref|NP_001093563.1| DNA excision repair protein ERCC-6-like [Danio rerio] gi|182645387|sp|A2BGR3|ERC6L_DANRE RecName: Full=DNA excision repair protein ERCC-6-like; AltName: Full=ATP-dependent helicase ERCC6-like gi|122890885|emb|CAM14199.1| novel protein [Danio rerio] gi|122891292|emb|CAM13192.1| novel protein [Danio rerio] Length = 1451 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/243 (11%), Positives = 65/243 (26%), Gaps = 54/243 (22%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----------- 51 Y+KF ++ + ++ +L + + + Sbjct: 394 IYNKFI--SLDQIKELLTTTRSPLAELTVLKKLCDHPRLLSQRAVIQLGLERGSDSELVH 451 Query: 52 ---------------------HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 K++ + ++E ++ L +++ Sbjct: 452 SDESESAVSQIDNISDHTLIEESGKLQFVVSLMECLREEGHRTLIFSQSRKMLDIMERVL 511 Query: 89 PQGRTL-----------DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + I + + + + G G+ L G N +V F Sbjct: 512 RNRNFRLLRLDGTVTQLAEREKRISLFQTDKRYTIFLLTTQVGGVGITLT-GANRVVIFD 570 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + V R + G V +Y LI T++E + +R K ++ Sbjct: 571 PSWNPAT-----DAQAVDRAYRIGQTENVIIYRLITCGTVEEKIYRRQVFKDSLIRQTTG 625 Query: 197 ALK 199 K Sbjct: 626 DKK 628 >gi|268531852|ref|XP_002631054.1| C. briggsae CBR-BTF-1 protein [Caenorhabditis briggsae] Length = 1510 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 7/114 (6%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + +N + I +L G GLNL G + ++F W+ M + Sbjct: 1335 PVGDRMKMVNRFNEDKTIEVLILTTHVGGVGLNLT-GADTVIFMDHDWNP-----MKDLQ 1388 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G R V VY LI Q T++E V+ + K L+ A + + Sbjct: 1389 AIDRAHRLGQTRNVNVYRLITQGTVEEKVMSLAKFKLNTAQALIGADNTSMMTM 1442 >gi|190406667|gb|EDV09934.1| hypothetical protein SCRG_05653 [Saccharomyces cerevisiae RM11-1a] gi|259144692|emb|CAY77633.1| Fun30p [Saccharomyces cerevisiae EC1118] Length = 1131 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 68/189 (35%), Gaps = 23/189 (12%) Query: 32 CLQLANGAVYY---DEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ 85 +L + + + + KI AL+ +++ +++ F L L+ Sbjct: 924 LHKLCCNFPNTLSKYQLHNDEWMQSGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILE 983 Query: 86 K----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++ I ++ + IP+ + G G+NL N ++ Sbjct: 984 MVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINL-VCANNVII 1042 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F ++ + +R R + G + V + LI +++I+E + Q + K + + Sbjct: 1043 FDQSFNPHD-----DRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYI 1097 Query: 195 LNALKKETI 203 K + + Sbjct: 1098 SEDKKSQDV 1106 >gi|19075231|ref|NP_587731.1| fun thirty related protein Fft2 [Schizosaccharomyces pombe 972h-] gi|74676118|sp|O74842|FFT2_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase fft2; AltName: Full=Fun thirty-related protein 2 gi|3668152|emb|CAA21109.1| fun thirty related protein Fft2 [Schizosaccharomyces pombe] Length = 1284 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 21/185 (11%) Query: 32 CLQLANGA--VYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ-- 85 +L + K + KI+ L+ ++ K + I++ F L L+ Sbjct: 900 LHRLCRSFPTLQSYTLKDDPWMDSGKIRVLKELLPKMKEEGSRILLFSQFTQMLDILEQV 959 Query: 86 -------KAFPQGRTLDK-DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 G T + I ++ E + + + G G+NL N+++ + Sbjct: 960 LDTLKISYVRLDGSTQVEVRQDIIDQFHKEEDVTVFLLSTKAGGFGINL-ACANVVILYD 1018 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ + + R + G R V V LI NTI+E + + TK + L + Sbjct: 1019 CSYNPFD-----DLQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKLANTKLALDMSLSS 1073 Query: 197 ALKKE 201 K Sbjct: 1074 DGKDR 1078 >gi|45187775|ref|NP_983998.1| ADL098Cp [Ashbya gossypii ATCC 10895] gi|44982536|gb|AAS51822.1| ADL098Cp [Ashbya gossypii ATCC 10895] Length = 804 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 78/220 (35%), Gaps = 36/220 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------HD 53 K Y + ++ +L+ + ++ + ++ Q+ + + E Sbjct: 509 KLYEQ---HIHKELRNKRLQ-----NLMMQLRQIVDSTFLFYFPYLKAEDLQLPVLLQTS 560 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCT 100 K++ L+ ++ + A +++ F S L ++ + Sbjct: 561 GKLQILQQLLPRLLAAKHKVLIFSQFVSMLDLIEDWCELNNYSACRIDGSMDNETRREQI 620 Query: 101 IQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +G L + G G+NL + ++ F W+ + ++ + R + Sbjct: 621 NSFSEKGSPHSLFLLSTRAGGLGINLTA-ADSVILFDNDWNPQ-----VDLQAMDRSHRI 674 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V VY L T++ ++L R K ++ L++ K Sbjct: 675 GQQHPVIVYRLYCDKTVESVILARATNKRKLEQLVIQMGK 714 >gi|256272274|gb|EEU07259.1| Fun30p [Saccharomyces cerevisiae JAY291] Length = 1131 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 68/189 (35%), Gaps = 23/189 (12%) Query: 32 CLQLANGAVYY---DEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ 85 +L + + + + KI AL+ +++ +++ F L L+ Sbjct: 924 LHKLCCNFPNTLSKYQLHNDEWMQSGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILE 983 Query: 86 K----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++ I ++ + IP+ + G G+NL N ++ Sbjct: 984 MVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINL-VCANNVII 1042 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F ++ + +R R + G + V + LI +++I+E + Q + K + + Sbjct: 1043 FDQSFNPHD-----DRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYI 1097 Query: 195 LNALKKETI 203 K + + Sbjct: 1098 SEDKKSQDV 1106 >gi|303316021|ref|XP_003068015.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240107691|gb|EER25870.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1142 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + ++ K++ L ++++ N I++ F L + Sbjct: 931 KNDEWMNSGKVEKLCELLKQYTENGDRILIFSQFTMVMDILEQVLETLEIRFFRLDGTTS 990 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + + E +P+ + G G+NL N ++ F ++ ++ + Sbjct: 991 VEDRQSILDAFYEQVDVPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQD-----DIQA 1044 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1045 ENRAHRVGQTREVEVVRLVTKGTIEEQIYALGQTKLVLDQRV 1086 >gi|291393761|ref|XP_002713270.1| PREDICTED: RAD54-like 2 [Oryctolagus cuniculus] Length = 1467 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I ++N+ L + G+NL G N +V F W+ Sbjct: 782 YFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 840 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 841 -----CHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLN 893 >gi|148689217|gb|EDL21164.1| Rad54 like 2 (S. cerevisiae) [Mus musculus] Length = 1466 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I ++N+ L + G+NL G N +V F W+ Sbjct: 781 YFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 839 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 840 -----CHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLN 892 >gi|126090612|ref|NP_109655.2| helicase ARIP4 [Mus musculus] Length = 1467 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I ++N+ L + G+NL G N +V F W+ Sbjct: 782 YFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 840 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 841 -----CHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLN 893 >gi|74137993|dbj|BAE25404.1| unnamed protein product [Mus musculus] Length = 1434 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I ++N+ L + G+NL G N +V F W+ Sbjct: 749 YFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 807 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 808 -----CHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLN 860 >gi|81916664|sp|Q99NG0|ARIP4_MOUSE RecName: Full=Helicase ARIP4; AltName: Full=Androgen receptor-interacting protein 4; AltName: Full=RAD54-like protein 2; AltName: Full=Steroid receptor-interacting SNF2 domain-containing protein-like gi|12331285|emb|CAC24703.1| steroid receptor-interacting SNF2 domain protein [Mus musculus] gi|126631448|gb|AAI33715.1| RAD54 like 2 (S. cerevisiae) [Mus musculus] Length = 1466 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I ++N+ L + G+NL G N +V F W+ Sbjct: 781 YFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 839 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 840 -----CHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLN 892 >gi|39974235|ref|XP_368508.1| hypothetical protein MGG_00736 [Magnaporthe oryzae 70-15] gi|145018332|gb|EDK02611.1| hypothetical protein MGG_00736 [Magnaporthe oryzae 70-15] Length = 1685 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 65/198 (32%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEK--ANAAPIIVAY 75 ++ + Y + + K+ L ++ K +++ Sbjct: 1116 LMQLRKCLCHPFVYSRDVEDTTLDPETMQRNLIEASPKLVLLSRMLPKLKEKGHRVLIFS 1175 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F L ++ L + I E+N L + G G+ Sbjct: 1176 QFLDQLDIIEDFLAGLGFLYQRLDGTMSSLEKQKRIDEFNAPSSELFAFLLSTRAGGVGI 1235 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + + ++R + G V + L+ + +++E ++Q Sbjct: 1236 NL-ATADTVIIMDPDFNPHQ-----DLQALSRAHRIGQMNKVLCFQLMTKGSVEEKIMQI 1289 Query: 184 LRTKSTIQDLLLNALKKE 201 R K + +L+ A+ E Sbjct: 1290 GRKKMALDHVLIEAMDDE 1307 >gi|302802510|ref|XP_002983009.1| hypothetical protein SELMODRAFT_117536 [Selaginella moellendorffii] gi|300149162|gb|EFJ15818.1| hypothetical protein SELMODRAFT_117536 [Selaginella moellendorffii] Length = 975 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 78/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 K Q+ Y L ++++A N+ + ++ + N + Sbjct: 348 KMQKHYYGSLLQKDLDAINTGGERRRLLNIAMQLKKCCNHPYLFQGAEPGPPYLSGEHLV 407 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ + Sbjct: 408 ENSGKMVLLDKLLPKLKQRDSRVLIFSQMTRLLDILEDYCIYRTYQYCRIDGKTSGEERE 467 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N+ L + G G+NL +I++ + W+ + + R Sbjct: 468 AAIESFNKEGSEKFLFLLSTRAGGLGINL-ATADIVILYDSDWNPQA-----DLQAQDRA 521 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ + TI+E V++R K + L++ + Sbjct: 522 HRIGQKKEVQVFRFCTELTIEEKVIERAYKKLALDALVIQQGR 564 >gi|255075383|ref|XP_002501366.1| SNF2 super family [Micromonas sp. RCC299] gi|226516630|gb|ACO62624.1| SNF2 super family [Micromonas sp. RCC299] Length = 961 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 64/191 (33%), Gaps = 9/191 (4%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 R + + + + + S+ Q + K ++ K L I + Sbjct: 759 RNAAAQHKKDELPSKSILSRID-LSQYTSSVKVDALLKGLNDMRSGKNGHLNKAIVFSQY 817 Query: 69 APIIVAYHFNSDLARLQKAFPQG-RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQ 126 +I + R A G + + ++ + + + ++ S G GLNLQ Sbjct: 818 TSMIEIVDWRLKKDRFTVAKLLGSMPITQRAANLKAFREDPNVSVILMSLKSGGEGLNLQ 877 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 N + WW+ + R + G R V ++TI+E ++Q Sbjct: 878 A-ANYVFVLEPWWNPAVEM-----QAIMRAHRIGQTRGVTAVRFSTKDTIEERMMQLQEK 931 Query: 187 KSTIQDLLLNA 197 K + + ++ Sbjct: 932 KKLVFEGCMDG 942 >gi|303317828|ref|XP_003068916.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240108597|gb|EER26771.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 961 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 71/215 (33%), Gaps = 45/215 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE-----------------------KHWKEVHDEKIK 57 + ++ +L N + +H+ KI+ Sbjct: 588 NSESALQLITILKKLCNSPSLLTLKVLKDENPNCTISSLISTLPPNLLRHFSPASSGKIR 647 Query: 58 ALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 L+ ++ ++ I++ ++ S L L K + ++ Sbjct: 648 VLDQLLHNLHSTTSEKIVLVSNYTSTLNLLAALLSSLSLPYLRLDGSTPASKRQFLVDDF 707 Query: 105 N---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N + G GLNL G + LV F + W+ + + R + G Sbjct: 708 NRSSSKSCFAFLLSAKAGGIGLNLT-GASRLVLFDVDWNPAT-----DIQAMARIHRDGQ 761 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR +Y ++ + ++E + QR TK + D +++ Sbjct: 762 KRHCHIYRMLLRGGLEEKIWQRQVTKLGLADSVMD 796 >gi|6319300|ref|NP_009383.1| Fun30p [Saccharomyces cerevisiae S288c] gi|401438|sp|P31380|FUN30_YEAST RecName: Full=Uncharacterized ATP-dependent helicase FUN30 gi|171856|gb|AAC04938.1| Fun30p [Saccharomyces cerevisiae] gi|285810183|tpg|DAA06969.1| TPA: Fun30p [Saccharomyces cerevisiae S288c] Length = 1131 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 68/189 (35%), Gaps = 23/189 (12%) Query: 32 CLQLANGAVYY---DEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ 85 +L + + + + KI AL+ +++ +++ F L L+ Sbjct: 924 LHKLCCNFPNTLSKYQLHNDEWMQSGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILE 983 Query: 86 K----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++ I ++ + IP+ + G G+NL N ++ Sbjct: 984 MVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINL-VCANNVII 1042 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F ++ + +R R + G + V + LI +++I+E + Q + K + + Sbjct: 1043 FDQSFNPHD-----DRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYI 1097 Query: 195 LNALKKETI 203 K + + Sbjct: 1098 SEDKKSQDV 1106 >gi|296235754|ref|XP_002763033.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial [Callithrix jacchus] Length = 1229 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 65/245 (26%), Gaps = 55/245 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 + Y KF ++ +E + ++ +L + Sbjct: 354 EIYRKFV--SLDHIKELLMETRSPLAELGILKKLCDHPRLLSARACGLLNLGTVTFSAQD 411 Query: 43 ----DEEKHWKEVH----------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 ++ + K+ L ++++ +V L +++ Sbjct: 412 GNEGEDSPDMDHIDQITDDTLMEESGKMIFLMGLLKRLRDEGHQTLVFSQSRQILNIIER 471 Query: 87 AFPQGR-----------TLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 L + I + G GL L +V Sbjct: 472 LLKNRHFKILRIDGTITHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLTLTA-ATRVVI 530 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + V R + G K V VY LI T++E + +R K ++ Sbjct: 531 FDPSWNPAT-----DAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQT 585 Query: 195 LNALK 199 K Sbjct: 586 TGEKK 590 >gi|149412153|ref|XP_001506490.1| PREDICTED: similar to hCG1997495 [Ornithorhynchus anatinus] Length = 1466 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 47/122 (38%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + I ++N+ + L + G+NL G N +V F Sbjct: 774 RNHSYYRLDGSTSASERERLINQFNDPSSSSVWLFLLSTRAGCLGVNL-IGANRVVVFDA 832 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K+ +Y L++ T+++ + R +K + D +++ Sbjct: 833 SWNP-----CHDAQAVCRVYRYGQKKPCHIYRLVSDFTLEKKIYDRQISKQGMSDRVVDD 887 Query: 198 LK 199 L Sbjct: 888 LN 889 >gi|326473174|gb|EGD97183.1| hypothetical protein TESG_04598 [Trichophyton tonsurans CBS 112818] Length = 1422 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 66/206 (32%), Gaps = 31/206 (15%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-------------VIIE 64 + E N + ++ + Y + + V+ + + Sbjct: 847 KQSERHNLNNILMQLRKCLCHPFVYSKAIEDRGVNSTLLHRNMVEASAKLQLLELLLPKL 906 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLL-- 112 + +++ F L ++ T K I +N Sbjct: 907 QERGHRVLIFSQFLDFLDIVEDFLDGLGLAHLRLDGSMTSLKKQKNIDAYNAPGSEYFAF 966 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ ++ + + ++R + G K+ V V+ L+ Sbjct: 967 LLSTRAGGVGINL-ATADTVIILDPDFNPHQ-----DIQALSRAHRIGQKKKVMVFQLMT 1020 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 + + +E ++Q + K + +L+ + Sbjct: 1021 RGSAEEKIMQIGKKKMALDHVLIERM 1046 >gi|291239296|ref|XP_002739559.1| PREDICTED: Lodestar protein-like [Saccoglossus kowalevskii] Length = 1134 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 30/246 (12%), Positives = 72/246 (29%), Gaps = 69/246 (28%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----------------------- 54 + ++ Q E + + + Sbjct: 879 GTQNMAHVLVWLLRLRQCCGHLSLLKEAVDIESCYSDGVDLSLVDQMKDLCVDESKPIDS 938 Query: 55 ---------------------KIKALEVIIEKA-------NAAPIIVAYHFNSDLARLQK 86 K+K + ++ ++ + L + Sbjct: 939 EISSGIVKDKSLLFEVSAMSTKVKKVMDGLKDIRAKSPAGKPMKTVIVSQWTKMLDIMVH 998 Query: 87 A----------FPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVF 134 T +++ +N+ ++ + G GLNL GGN L Sbjct: 999 HLKENGFKYCVIQGNVTPKARSESVENFNKNPKGPEVMLVSLRAGGVGLNL-IGGNHLFL 1057 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ QQ +RI + G ++ VF++ + +NT++E +L+ + K+ + + Sbjct: 1058 LDMHWNPALEQQACDRI-----YRVGQEKEVFIHKFVCKNTVEEKILELQKKKTNLATNV 1112 Query: 195 LNALKK 200 L+ + Sbjct: 1113 LSGDRA 1118 >gi|157878809|ref|XP_001687416.1| DNA excision/repair protein SNF2 [Leishmania major strain Friedlin] gi|321438075|emb|CBZ11827.1| putative DNA excision/repair protein SNF2 [Leishmania major strain Friedlin] Length = 925 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 57/208 (27%), Gaps = 39/208 (18%) Query: 22 AFNSASKTVKCLQLANGAV----------------YYDEEKHWKEVHD-EKIKALEVIIE 64 + N Q+ + Y ++ K+ ++ Sbjct: 431 STNPLLLLTMLSQICSHPWLSLLDEAFAAALARNPYKAPVAEMGDIFSGAKLWVALQLLL 490 Query: 65 KA--NAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDP--CTIQEWNEGKIPL 111 +V L RL G T + + N+ + + Sbjct: 491 HCVSEQRKTLVFSRSRRILRLLSFLLQEWRLTHTQVDGDTPSERRCAEVDRFNNDAGVWV 550 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 G GL + +V W+ + V R + G +R V V+ L+ Sbjct: 551 CLLTTQVGGVGLTF-NAASAVVLLDPSWNPSA-----DAQAVDRVHRIGQRRDVVVFRLV 604 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALK 199 +T++E V + K L ++K Sbjct: 605 TCDTVEEKVYRNQIFKRM---AALQSMK 629 >gi|194384680|dbj|BAG59500.1| unnamed protein product [Homo sapiens] Length = 1014 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 70/237 (29%), Gaps = 42/237 (17%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + + L N + ++ + N + + Sbjct: 687 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 746 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 747 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 806 Query: 98 ----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F WD + Sbjct: 807 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWDPQN-- 863 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 864 ---DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 917 >gi|50310795|ref|XP_455420.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644556|emb|CAG98128.1| KLLA0F07513p [Kluyveromyces lactis] Length = 1048 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 72/185 (38%), Gaps = 22/185 (11%) Query: 32 CLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK 86 +L +Y + + + ++ K++ L+ ++ K ++V F L L+ Sbjct: 848 LHKLCCKFPSLYKFKLQSDEWMNSGKVEQLKSVLHKIIDIQHEKVLVFSLFTQVLDILEF 907 Query: 87 A-----------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 Q + D+ + + + IP+ + G G+NL N ++ F Sbjct: 908 VLSTLNIKFLRLDGQTQVNDRQSLIDRFYEDDTIPVFLLSTKAGGFGINL-VCANNVIIF 966 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ + +R R + G + V V LI+++TI+E +L + K + + Sbjct: 967 DQSFNPHD-----DRQAADRAHRVGQTKEVQVTTLISRDTIEEKILHLAKNKLALDTHIS 1021 Query: 196 NALKK 200 KK Sbjct: 1022 QEDKK 1026 >gi|30686918|ref|NP_850847.1| CHR17 (CHROMATIN REMODELING FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding [Arabidopsis thaliana] gi|332005205|gb|AED92588.1| chromatin remodeling factor17 [Arabidopsis thaliana] Length = 1072 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 78/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q++ Y L +++E N + ++ + N + Sbjct: 432 QMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLV 491 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ + Sbjct: 492 TNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERD 551 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL ++++ + W+ + ++ R Sbjct: 552 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 605 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ +N I+ V++R K + L++ + Sbjct: 606 HRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGR 648 >gi|320032369|gb|EFW14322.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira] Length = 1132 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + ++ K++ L ++++ N I++ F L + Sbjct: 921 KNDEWMNSGKVEKLCELLKQYTENGDRILIFSQFTMVVDILEQVLETLEIRFFRLDGTTS 980 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + + E +P+ + G G+NL N ++ F ++ ++ + Sbjct: 981 VEDRQSILDAFYEQVDVPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQD-----DIQA 1034 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1035 ENRAHRVGQTREVEVVRLVTKGTIEEQIYALGQTKLVLDQRV 1076 >gi|302771908|ref|XP_002969372.1| hypothetical protein SELMODRAFT_440815 [Selaginella moellendorffii] gi|300162848|gb|EFJ29460.1| hypothetical protein SELMODRAFT_440815 [Selaginella moellendorffii] Length = 1544 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/231 (11%), Positives = 68/231 (29%), Gaps = 36/231 (15%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + DL + + V+ + N ++ H + Sbjct: 696 QYYKWILERNFSDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGANATMTDNSR 755 Query: 61 -----------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 ++ K +++ L L + Sbjct: 756 VQRVVLSSGKLVLLDKLLVRLKETGHRVLIFSQMVKMLDILADYLRLRGFQFQRLDGSTK 815 Query: 98 ----PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N + G G+NL + ++ F W+ + + Sbjct: 816 HHLRQQAMEHFNAPGSEDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQ 869 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++R + G + V +Y + +++E +L+R + K + L++ L + Sbjct: 870 AMSRAHRIGQEFVVNIYRFVTCRSVEEDILERAKKKMVLDHLVIQKLNAQG 920 >gi|297812047|ref|XP_002873907.1| hypothetical protein ARALYDRAFT_488746 [Arabidopsis lyrata subsp. lyrata] gi|297319744|gb|EFH50166.1| hypothetical protein ARALYDRAFT_488746 [Arabidopsis lyrata subsp. lyrata] Length = 1074 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 78/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q++ Y L +++E N + ++ + N + Sbjct: 432 QMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLV 491 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ + Sbjct: 492 TNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERD 551 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL ++++ + W+ + ++ R Sbjct: 552 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 605 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ +N I+ V++R K + L++ + Sbjct: 606 HRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGR 648 >gi|257463846|ref|ZP_05628233.1| SWF/SNF family helicase [Fusobacterium sp. D12] gi|317061380|ref|ZP_07925865.1| metal dependent hydrolase [Fusobacterium sp. D12] gi|313687056|gb|EFS23891.1| metal dependent hydrolase [Fusobacterium sp. D12] Length = 1134 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 28/215 (13%) Query: 2 KQYHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + Y + E F + Q+ + E + K Sbjct: 914 KFYEERRNYYYNMIHAGIREKGLGKVQFFILQALNELRQITS-----CPEIKNAYISSSK 968 Query: 56 IKALEVIIEK--ANAAPIIVAYHFN---------SDLARLQKAFPQGRTLDKDPCTIQEW 104 + L I + N ++V ++ + + G T D+ + Sbjct: 969 KEMLLEQISEAVENDHKVLVFTNYIGSIDTICKSLEEQEIPYLSMTGSTKDRQQLVNKFQ 1028 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K + + G GLNL + + + WW+ + +E + R + G R Sbjct: 1029 KNEKYKVFVMTLKTGGVGLNLTA-ADTIFIYDPWWN-----KTVENQAIDRAYRLGQDRT 1082 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VF Y LI ++TI+E +LQ KS + D +++ Sbjct: 1083 VFSYKLILKDTIEEKILQLQELKSKLLDDVISEDN 1117 >gi|121708629|ref|XP_001272195.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus clavatus NRRL 1] gi|119400343|gb|EAW10769.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus clavatus NRRL 1] Length = 1522 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 70/198 (35%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDE-----------EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAY 75 ++ + Y E + K++ L++++ K +++ Sbjct: 970 LMQLRKCLCHPFVYSEAIEERTSNATVSQRHLTEASGKLQLLQIMLPKLKERGHRVLIFS 1029 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F +L ++ L + I E+N P S G G+ Sbjct: 1030 QFLDNLDIVEDFLDGLGLLHRRLDGRMNSLEKQKRIDEYNAENSPYFAFLLSTRSGGVGI 1089 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + ++R + G K V V+ L+ + +++E ++Q Sbjct: 1090 NL-ATADTVIIMDPDFNPHQDM-----QALSRAHRIGQKNKVLVFQLMTRGSVEEKIMQI 1143 Query: 184 LRTKSTIQDLLLNALKKE 201 + K + +L++ + E Sbjct: 1144 GKKKMVLDHVLIDRMISE 1161 >gi|323337858|gb|EGA79098.1| Chd1p [Saccharomyces cerevisiae Vin13] Length = 1329 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 78/228 (34%), Gaps = 39/228 (17%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y L G F+ + + + +N +D + Sbjct: 624 EYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTR 683 Query: 51 --------VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 + K+ L+ ++ K + +++ L L Sbjct: 684 ENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDG 743 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + +I +N + + G G+NL + +V F W+ + Sbjct: 744 TVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA----- 797 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 798 DLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 845 >gi|297837353|ref|XP_002886558.1| hypothetical protein ARALYDRAFT_475211 [Arabidopsis lyrata subsp. lyrata] gi|297332399|gb|EFH62817.1| hypothetical protein ARALYDRAFT_475211 [Arabidopsis lyrata subsp. lyrata] Length = 1281 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 50/144 (34%), Gaps = 17/144 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + + +Q++N ++ ++ Sbjct: 1124 GEKAIVFSQWTKMLDLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVMIMSL 1183 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ + ++ LWW+ E + R + G R V V ++T+ Sbjct: 1184 KAASLGLNMVAACH-VLMLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVVRFTVKDTV 1237 Query: 177 DELVLQRLRTKSTIQDLLLNALKK 200 ++ +L + K + +K Sbjct: 1238 EDRILALQQKKRMMVASAFGEDEK 1261 >gi|296005052|ref|XP_002808863.1| ATP-dependent helicase, putative [Plasmodium falciparum 3D7] gi|263429743|sp|C0H4W3|HEPF1_PLAF7 RecName: Full=Probable ATP-dependent helicase PF08_0048 gi|225632260|emb|CAX64141.1| ATP-dependent helicase, putative [Plasmodium falciparum 3D7] Length = 2082 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 65/167 (38%), Gaps = 19/167 (11%) Query: 43 DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 + K+ ALE ++ K ++ F L L+ Sbjct: 1757 FPLNKDISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDG 1816 Query: 91 GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +++ + ++N K I + + S G+NL N+++F+ W+ I+ Sbjct: 1817 STKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTA-ANVVIFYDTDWNPS-----ID 1870 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G + V V+ + + T++E + ++ K + ++ +N Sbjct: 1871 KQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICIN 1917 >gi|15898473|ref|NP_343078.1| hypothetical protein SSO1655 [Sulfolobus solfataricus P2] gi|13814902|gb|AAK41868.1| Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical [Sulfolobus solfataricus P2] Length = 124 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 6/101 (5%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D + N + + + G G+NL N ++ F WW+ +E R Sbjct: 6 DDIISKFQNNPSVKFIVLSVKAGGFGINLTS-ANRVIHFDRWWNPA-----VEDQATDRV 59 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V+ LI+ T++E + Q L K ++ ++++ Sbjct: 60 YRIGQTRNVIVHKLISVGTLEEKIDQLLAFKRSLFKDIISS 100 >gi|47208011|emb|CAF91219.1| unnamed protein product [Tetraodon nigroviridis] Length = 454 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 19/173 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFP-------- 89 + + K L+ ++ K +++ S L L Sbjct: 222 RKFLQIDEQLVQSSGKFLILDRMLPALKRRGHKVLIFSQMTSILDILMDYCFLRGFQYSR 281 Query: 90 --QGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T I ++ + ++ L + G G+NL + ++ F W+ + Sbjct: 282 LDGSMTFADREENITKFSKDPQVFLFLLSTRAGGLGINLTA-ADTVIIFDSDWNPQA--- 337 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G + V VY L+ NTID+ +L+R K ++ ++++ K Sbjct: 338 --DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKILERASNKRKLEQMVIHKNK 388 >gi|115475083|ref|NP_001061138.1| Os08g0180300 [Oryza sativa Japonica Group] gi|46805057|dbj|BAD17038.1| putative SNF2 domain-containing protein [Oryza sativa Japonica Group] gi|113623107|dbj|BAF23052.1| Os08g0180300 [Oryza sativa Japonica Group] gi|215712333|dbj|BAG94460.1| unnamed protein product [Oryza sativa Japonica Group] gi|222640021|gb|EEE68153.1| hypothetical protein OsJ_26263 [Oryza sativa Japonica Group] Length = 1030 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 50/141 (35%), Gaps = 17/141 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 IV + L L+ + + ++++N + ++ ++ + Sbjct: 877 KAIVFSQWTGMLDLLELSLNSNLIQYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKA 936 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E + R + G R V V L ++T+++ Sbjct: 937 GNLGLNMVAACH-VILLDLWWNP-----YAEDQAIDRAHRIGQTRPVTVSRLTIKDTVED 990 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +L K + K Sbjct: 991 RILALQEEKRAMVSSAFGEDK 1011 >gi|119186353|ref|XP_001243783.1| hypothetical protein CIMG_03224 [Coccidioides immitis RS] Length = 964 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 72/215 (33%), Gaps = 45/215 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE-----------------------KHWKEVHDEKIK 57 ++ ++ +L N + +H+ KI+ Sbjct: 591 DSESALQLITILKKLCNSPSLLTLKVLKDENPNCTISSLISTLPPNLLRHFSPASSGKIR 650 Query: 58 ALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 L+ ++ ++ I++ ++ S L L K + ++ Sbjct: 651 VLDQLLHNLHSTTSEKIVLVSNYTSTLNLLAALLSSLSLPYLRLDGSTPASKRQFLVDDF 710 Query: 105 N---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N + G GLNL G + LV F + W+ + + R + G Sbjct: 711 NRSSSKSCFAFLLSAKAGGIGLNLT-GASRLVLFDVDWNPAT-----DIQAMARIHRDGQ 764 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR +Y ++ + ++E + QR TK + D +++ Sbjct: 765 KRHCHIYRMLLRGGLEEKIWQRQVTKLGLADSVMD 799 >gi|326428818|gb|EGD74388.1| hypothetical protein PTSG_12442 [Salpingoeca sp. ATCC 50818] Length = 1313 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 52/159 (32%), Gaps = 20/159 (12%) Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR-----------LQKAFPQGRT 93 H K++ ++E+ ++ L + Sbjct: 591 HDVVKQSGKLRFCVHLLEQLRQEGHRALLFSQSLKMLDIISAVLNEQGVKHSRLHGAISD 650 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D+ + ++N + I + G GL L G + ++ F W+ + Sbjct: 651 TDERQKIVDDFNSDASIFCMLLTTQVGGVGLTLT-GADRVIIFDPSWNPST-----DAQA 704 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 V R + G R V VY LI TI+E + ++ K + Sbjct: 705 VDRAYRIGQTRRVVVYRLITCGTIEEKIYRKQVFKDGLS 743 >gi|302920912|ref|XP_003053175.1| hypothetical protein NECHADRAFT_105989 [Nectria haematococca mpVI 77-13-4] gi|256734115|gb|EEU47462.1| hypothetical protein NECHADRAFT_105989 [Nectria haematococca mpVI 77-13-4] Length = 1144 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 59/166 (35%), Gaps = 20/166 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDP 98 K+ A ++++ N IV + + + + + Sbjct: 970 PAAKVTACMDLLKQINETGEKTIVFSQWTLLLDLLQVAMSHEKLEKPERYDGSMSATHRN 1029 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + + + ++ + GLNL + ++ +W+ IE V R Sbjct: 1030 IAARNFRDRKDVKVMLVSLRAGNAGLNLTA-ASRVIIMDPFWNP-----YIEMQAVDRAY 1083 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G ++ V VY ++ + T+++ ++ K I + L+ + I Sbjct: 1084 RIGQQKEVKVYRILTKKTVEDRIVALQNQKKEIVEAALDENEGRQI 1129 Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 5/68 (7%), Positives = 15/68 (22%), Gaps = 6/68 (8%) Query: 4 YHKFQRELYCDLQG----ENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + ++ +I N ++ Q + + Sbjct: 700 YDQLEKNAQVQFSKYLRAGSIGKNYSNILVLLLRMRQACCHPHLNLDVDDAAPNSTISNE 759 Query: 58 ALEVIIEK 65 E ++ Sbjct: 760 EKEELVRS 767 >gi|47211649|emb|CAF94986.1| unnamed protein product [Tetraodon nigroviridis] Length = 1320 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 45/116 (38%), Gaps = 9/116 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 T + I ++N+ + + + G+NL G N +V F W+ Sbjct: 869 YYRLDGSTTASERERLINQFNDPSNTSVWVFLLSTRAGCLGVNL-IGANRVVVFDASWNP 927 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V R + G ++ +Y L+ T+++ + R +K + D +++ Sbjct: 928 -----CHDAQAVCRVYRYGQRKPCHIYRLVCDFTLEKKIYDRQISKQGMSDRVVDD 978 >gi|68477713|ref|XP_717169.1| hypothetical protein CaO19.5367 [Candida albicans SC5314] gi|68477876|ref|XP_717090.1| hypothetical protein CaO19.12827 [Candida albicans SC5314] gi|46438788|gb|EAK98114.1| hypothetical protein CaO19.12827 [Candida albicans SC5314] gi|46438870|gb|EAK98195.1| hypothetical protein CaO19.5367 [Candida albicans SC5314] Length = 796 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 28/201 (13%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-----------VIIEKA 66 + F + + ++ N +++ +K++ +EK ++ + Sbjct: 472 KKFNQFEAFTMINLFKKICNSPSLLADDELFKKIVEEKFNLGMASGKINILVPLLLEIAS 531 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAH 115 I++ ++ L L++ + + + ++N I + Sbjct: 532 LGEKIVLISNYTKTLDLLEQVLRKVSLTFSRLDGSTPNNVRSKLVNQFNTNPDINVFLLS 591 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 S G G+NL G + L+ F W+ Q + RI + G + F+Y L Sbjct: 592 SKSGGMGINL-VGASRLILFDNDWNPATDLQSMSRI-----HRDGQLKPCFIYRLFTTGC 645 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 IDE + QR K+ + L+ Sbjct: 646 IDEKIFQRQLVKNKLSSKFLD 666 >gi|157870556|ref|XP_001683828.1| DNA repair protein [Leishmania major strain Friedlin] gi|68126895|emb|CAJ04924.1| putative DNA repair protein [Leishmania major strain Friedlin] Length = 1092 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAF----------P 89 + K +H K+ A+ IE+ ++V F S L Q Sbjct: 911 IFARLDPQKPLHGTKLDAIANYIEEVPKDEKVVVFSQFGSMLDLTQYWLQRRSIRAVKLC 970 Query: 90 QGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 TL + +Q + ++ + ++ + G GLNLQ N +V WW+ Sbjct: 971 GSLTLTQRQSVLQAFLHDQNVRVILISLKAGGEGLNLQ-VANHVVLTDPWWNPAVEM--- 1026 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V R + G R V + +++++E ++ K + + ++ Sbjct: 1027 --QAVQRAHRIGQTRPVHAVRFVTEHSVEERMVDLQDKKMLVFEGTIDG 1073 >gi|322695761|gb|EFY87564.1| DNA repair and recombination protein RAD5B [Metarhizium acridum CQMa 102] Length = 1030 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 20/166 (12%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDP 98 K +A+ I++ + + +++ + S L +Q T +D Sbjct: 857 SSKTEAMMQILQATLNKHGSKVVIFSQWTSFLNIVQNQLDGAGIKYSRIDGSMNTEKRDR 916 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 N+ + ++ A A C GLNL + ++ WW IE + R + Sbjct: 917 AVQALDNDAETRVMLASLAVCSVGLNLVS-ADTVILSDSWWAPA-----IEDQAIDRVHR 970 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G R V+ LI + +++E VL + K + +++ H Sbjct: 971 LGQTRKTTVWRLIVEGSVEERVLDIQKEKRDLVTKAFQEKERKGKH 1016 >gi|302307681|ref|NP_984405.2| ADR309Wp [Ashbya gossypii ATCC 10895] gi|299789116|gb|AAS52229.2| ADR309Wp [Ashbya gossypii ATCC 10895] Length = 1486 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 66/177 (37%), Gaps = 11/177 (6%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + A LQ G + + K + +I + + F + Sbjct: 1200 TKLSIAFPDKSLLQYDCGKLQ----SLAVLLRRLKEEGHRALIFTQMTKVLDILEQFLNY 1255 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 L ++ + +N + +I + S G G+NL G + ++F+ W Sbjct: 1256 HGYLYMRLDGATKIEDRQILTERFNTDPRITVFILSSRSGGLGINLT-GADTVIFYDSDW 1314 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + +++ R + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1315 NPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNIVIQ 1366 >gi|169767388|ref|XP_001818165.1| DNA-dependent ATPase [Aspergillus oryzae RIB40] gi|83766020|dbj|BAE56163.1| unnamed protein product [Aspergillus oryzae] Length = 957 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 72/214 (33%), Gaps = 44/214 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE----------------------KHWKEVHDEKIKA 58 + N+ +L N +H+ KI+ Sbjct: 559 NSENALQLITILKKLCNSPSLLSPRNVDEKPSETIAALLSSLPPNLLRHFSPSSSAKIRV 618 Query: 59 LEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ + + +++ ++ S L L K ++++N Sbjct: 619 LDQLLHILHTSTSEKVVLVSNYTSTLNLLATLLTSLSLPFLRLDGSTPAQKRQSLVEDFN 678 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL G + L+ F + W+ + + R + G K Sbjct: 679 RFPTNRCFAFLLSAKAGGTGLNL-IGASRLILFDVDWNPAT-----DIQAMARIHRDGQK 732 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R +Y ++ + +++E + QR TK + D ++ Sbjct: 733 RHCRIYRILLKGSLEEKIWQRQVTKLGLADSVME 766 >gi|67525031|ref|XP_660577.1| hypothetical protein AN2973.2 [Aspergillus nidulans FGSC A4] gi|40744368|gb|EAA63544.1| hypothetical protein AN2973.2 [Aspergillus nidulans FGSC A4] gi|259486081|tpe|CBF83639.1| TPA: SNF2 family helicase/ATPase, putative (AFU_orthologue; AFUA_3G08400) [Aspergillus nidulans FGSC A4] Length = 1107 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + + K+ L ++ K N ++V F + + Sbjct: 918 KNNEWMDSGKVDKLCELLRRFKENGDRVLVFSQFRLAMDILEVVLENQHLKFVRLDGTTS 977 Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + + IP+ + G G+NL N ++ F ++ + + Sbjct: 978 VEDRQSIMDTFHENTDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDVQA 1031 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1032 ENRAHRVGQTREVEVIRLVTKDTIEEQIYALGQTKLALDQAV 1073 >gi|253581922|ref|ZP_04859146.1| SWF/SNF family helicase [Fusobacterium varium ATCC 27725] gi|251836271|gb|EES64808.1| SWF/SNF family helicase [Fusobacterium varium ATCC 27725] Length = 926 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 79/213 (37%), Gaps = 28/213 (13%) Query: 2 KQYHKFQRELYCDLQ------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + Y + G F + Q+ + E V K Sbjct: 706 KLYEERRSYYYKMVNSQIRENGIGKTQFFILQALNELRQITS-----CPEAKSNGVTSSK 760 Query: 56 IKALEVIIEK--ANAAPIIVAYHFN-------SDLARLQKAF--PQGRTLDKDPCTIQEW 104 + L I + N ++V ++ DL R + G T D+ + Sbjct: 761 REVLVNNIVEAVENGHKVLVFTNYINSIENICEDLKRYGINYLSMTGSTKDRQSLVDRFQ 820 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + K + + G GLNL + + + WW+ + +E + R + G R Sbjct: 821 KDNKYKVFIMTLKTGGVGLNLTA-ADTIFIYDPWWN-----KTVENQAIDRAYRLGQDRT 874 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 VF Y LI ++TI+E +LQ TKS + D L++ Sbjct: 875 VFSYKLILKDTIEEKILQLQDTKSKLLDNLISE 907 >gi|225463768|ref|XP_002267403.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1036 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 59/173 (34%), Gaps = 17/173 (9%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 + + E+ + V K E IV + S L ++ + Sbjct: 849 CSSSAKIYTEQCYSGVGSSKQTTAYSNPETEGPIKAIVFSQWTSMLDLVEMSMNHSCIQY 908 Query: 96 KD----------PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + ++++N + ++ ++ + GLN+ ++++ LWW+ Sbjct: 909 RRLDGTMSLASRDRAVKDFNTDPEVTVMLMSLKAGNLGLNMVA-ASLVILLDLWWNPTT- 966 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E V R + G R V V + ++T+++ +L K + Sbjct: 967 ----EDQAVDRAHRIGQTRPVTVSRITIKDTVEDRILALQEDKRKMVASAFGE 1015 >gi|224065816|ref|XP_002190293.1| PREDICTED: similar to hCG1997495 [Taeniopygia guttata] Length = 1473 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + I ++N+ + L + G+NL G N +V F W+ Sbjct: 791 YYRLDGSTSASERERLINQFNDPSNASVWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 849 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L++ T+++ + R +K + D +++ L Sbjct: 850 -----CHDAQAVCRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSDRVVDDLN 902 >gi|167535565|ref|XP_001749456.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772084|gb|EDQ85741.1| predicted protein [Monosiga brevicollis MX1] Length = 1326 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 12/177 (6%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 K L E + + + I ++E+ A + + + + Sbjct: 821 KLLMECIVP-KAVELQEKVLIFSQSIP-ALDLLEQYLARVNVPNSNERWEKDKHYFRLDG 878 Query: 91 GRTLDKDPCTIQEWNE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I+++N+ L + G+NL N +V W+ Sbjct: 879 STHATSRTKLIEDFNDTDVNDNCHLFLLSTRAGSLGINLTA-ANRVVILDASWNPTH--- 934 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + V R + G R +Y LIA T++E + R K + +++ E + Sbjct: 935 --DSQAVCRVYRYGQSRNCHIYRLIASGTMEETIYNRQIHKLGLSQRVVDTENPERL 989 >gi|30686915|ref|NP_568365.2| CHR17 (CHROMATIN REMODELING FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding [Arabidopsis thaliana] gi|332005204|gb|AED92587.1| chromatin remodeling factor17 [Arabidopsis thaliana] Length = 1069 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 78/223 (34%), Gaps = 35/223 (15%) Query: 6 KFQRELYCDLQGENIEAFNS-------ASKTVKCLQLANGAVYYDE--------EKHWKE 50 + Q++ Y L +++E N + ++ + N + Sbjct: 432 QMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLV 491 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 + K+ L+ ++ K + +++ L L+ + Sbjct: 492 TNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERD 551 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +I+ +N+ + + G G+NL ++++ + W+ + ++ R Sbjct: 552 ASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYDSDWNPQ-----VDLQAQDRA 605 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V V+ +N I+ V++R K + L++ + Sbjct: 606 HRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGR 648 >gi|327265769|ref|XP_003217680.1| PREDICTED: helicase ARIP4-like [Anolis carolinensis] Length = 1479 Score = 86.3 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + I ++N+ + L + G+NL G N +V F W+ Sbjct: 794 YYRLDGSTSASERERLINQFNDPTNTSVSLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 852 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L++ T+++ + R +K + D +++ L Sbjct: 853 -----CHDAQAVCRVYRYGQKKPCHIYRLVSDFTLEKKIYDRQISKQGMSDRVVDDLN 905 >gi|322697346|gb|EFY89127.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Metarhizium acridum CQMa 102] Length = 1142 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 65/189 (34%), Gaps = 23/189 (12%) Query: 28 KTVKCLQLANG--AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 K+++ N Y + K+ ++ + I+ + L Sbjct: 941 KSLRLEAAKNHRAHKRYMAYLRKTWMPAAKVTECMKLLREIRETGEKTIIFSQWTLLLDL 1000 Query: 84 LQKAFPQ------------GRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGN 130 L+ A + D+ + + + + ++ + GLNL + Sbjct: 1001 LEVAMWHEQFPEKPIRYDGSMSGDERSTAAKHFRDRPEYNVMLVSLRAGNAGLNLTA-AS 1059 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ +W+ IE + R + G ++ V VY ++ Q T+++ ++ K I Sbjct: 1060 RVIIMDPFWNP-----YIEMQAIDRTYRIGQQKEVEVYRILTQETVEDRIVALQNKKKEI 1114 Query: 191 QDLLLNALK 199 + L+ + Sbjct: 1115 VEAALDETE 1123 Score = 38.2 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 3/57 (5%), Positives = 13/57 (22%), Gaps = 6/57 (10%) Query: 4 YHKFQRELYC----DLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 Y + + + L+ ++ + ++ Q + Sbjct: 708 YKQLEEKAQVVFSKYLREGSVGKNYSSILVLLLRLRQACCHPHLNLDVDDAVNPVSS 764 >gi|309365060|emb|CAP23772.2| CBR-BTF-1 protein [Caenorhabditis briggsae AF16] Length = 1653 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 7/114 (6%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + +N + I +L G GLNL G + ++F W+ M + Sbjct: 1478 PVGDRMKMVNRFNEDKTIEVLILTTHVGGVGLNLT-GADTVIFMDHDWNP-----MKDLQ 1531 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G R V VY LI Q T++E V+ + K L+ A + + Sbjct: 1532 AIDRAHRLGQTRNVNVYRLITQGTVEEKVMSLAKFKLNTAQALIGADNTSMMTM 1585 >gi|254565235|ref|XP_002489728.1| ATPase that forms a large complex, containing actin and several actin-related proteins [Pichia pastoris GS115] gi|238029524|emb|CAY67447.1| ATPase that forms a large complex, containing actin and several actin-related proteins [Pichia pastoris GS115] gi|328350146|emb|CCA36546.1| DNA helicase INO80 [Pichia pastoris CBS 7435] Length = 1236 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 61/160 (38%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KD 97 + K+ L+ ++ K ++V + + +++ + + Sbjct: 1041 IESGKLAKLDKMLVRLKKEGHKVLVYFQMTKMMDLMEEFLTYRQYKYIRLDGSSKLSDRR 1100 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ + + G G+NL + ++F+ W+ I+ + R Sbjct: 1101 DLVHDWQTKPELFVFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAH 1154 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1155 RLGQTRQVTVYRLLVRGTIEEKMRNRAKQKEHVQQVVMEG 1194 >gi|258564262|ref|XP_002582876.1| hypothetical protein UREG_07649 [Uncinocarpus reesii 1704] gi|237908383|gb|EEP82784.1| hypothetical protein UREG_07649 [Uncinocarpus reesii 1704] Length = 1123 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 63/162 (38%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + ++ K++ L +++K N ++V F L + Sbjct: 927 KNDEWMNSGKVEKLCELLKKFTENGDRVLVFSQFTMVMDILEHVLETLQIRFFRLDGTTS 986 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + + E IP+ + G G+NL N ++ F ++ ++ + Sbjct: 987 VEDRQSILDAFYEQVDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQD-----DIQA 1040 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ ++TI+E + +TK + + Sbjct: 1041 ENRAHRVGQTREVEVVRLVTKDTIEEQIYALGQTKLVLDQRV 1082 >gi|213404796|ref|XP_002173170.1| helicase SWR1 [Schizosaccharomyces japonicus yFS275] gi|212001217|gb|EEB06877.1| helicase SWR1 [Schizosaccharomyces japonicus yFS275] Length = 1246 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 66/188 (35%), Gaps = 22/188 (11%) Query: 32 CLQLA-NGAVYYDEE-KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNS-------- 79 +L N + K + KI L+ ++ K I++ F Sbjct: 860 LHKLCRNFPSLHPYMLKDDPWMKSGKIDVLKKLLPKMKEQGDRILIFSQFTQVIDILEQV 919 Query: 80 --DLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 L ++ I ++ E I + + G G+NL N+++ + Sbjct: 920 LDTLKITYTRLDGSTQVETRQDIIDQFHRETDITVFLLSTKAGGFGINL-ACANVVILYD 978 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ + + R + G + V V LI +NT++E + + TK + L + Sbjct: 979 CSYNPFD-----DLQAEDRAHRVGQTKQVTVIRLITKNTVEEYIQRLANTKLALDMSLSS 1033 Query: 197 ALK-KETI 203 K +E + Sbjct: 1034 ENKDREML 1041 >gi|156847261|ref|XP_001646515.1| hypothetical protein Kpol_1055p13 [Vanderwaltozyma polyspora DSM 70294] gi|156117193|gb|EDO18657.1| hypothetical protein Kpol_1055p13 [Vanderwaltozyma polyspora DSM 70294] Length = 1552 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 64/177 (36%), Gaps = 11/177 (6%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 A LQ G + + + +I + + F + Sbjct: 1268 TKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGH----RALIFTQMTKVLDILEQFLNY 1323 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 L ++ + +N + ++ + S G G+NL G + ++F+ W Sbjct: 1324 HGYLYMRLDGATKIEDRQILTERFNNDPRVTVFILSSRSGGLGINLT-GADTVIFYDSDW 1382 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + +++ R + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1383 NPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVIIQ 1434 >gi|296225327|ref|XP_002758442.1| PREDICTED: helicase ARIP4 [Callithrix jacchus] Length = 1467 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I ++N+ L + G+NL G N +V F W+ Sbjct: 782 YFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 840 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 841 -----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLN 893 >gi|301093032|ref|XP_002997365.1| DNA repair and recombination protein RAD26 [Phytophthora infestans T30-4] gi|262110763|gb|EEY68815.1| DNA repair and recombination protein RAD26 [Phytophthora infestans T30-4] Length = 1039 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 54/168 (32%), Gaps = 20/168 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD---- 95 + E K+ LE ++ K ++ L +Q T Sbjct: 656 FQEMCAISTKTCGKMIVLEKLLSVWKKRRQRTLIFSRSTRMLDIIQLFLITKATKYSRLD 715 Query: 96 ------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + + ++N + + + G GLNLQ +V F W+ Sbjct: 716 GNTKVEERLQMVNDFNSSESNTTVFLISTRAGGVGLNLQS-ATNVVIFDPSWNPAHDC-- 772 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + V VY LI TI+E++ R K + D L Sbjct: 773 ---QAQDRAYRIGQTKDVQVYRLITLGTIEEMIYVRQIYKQQLSDTTL 817 >gi|239611529|gb|EEQ88516.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3] Length = 1148 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + +H K+ L ++ K N +V F L + Sbjct: 935 KNDEWMHSGKVDKLCELLTRFKENGDRTLVFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 994 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ T+ ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 995 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDVQA 1048 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G RAV V L+ ++TI+E + +TK + + Sbjct: 1049 ENRAHRVGQTRAVEVVRLVTRDTIEEQMYALGQTKLALDQRV 1090 >gi|194745043|ref|XP_001955002.1| GF18554 [Drosophila ananassae] gi|190628039|gb|EDV43563.1| GF18554 [Drosophila ananassae] Length = 1921 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 75/252 (29%), Gaps = 58/252 (23%) Query: 1 MKQYHKF----QRELYCDLQGENIEAF---------NSASKTVKCLQLANGAVYYDEEKH 47 ++ Y F ++ L A + + N + Sbjct: 1607 LRLYEDFSNKHLKDCLDKLSDSPASAMVAENLGAKTHIFQALRYLQNVCNHPKLVLRQSE 1666 Query: 48 W----------------KEVHDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLA 82 H K+ AL+ ++ + ++ + L Sbjct: 1667 DLAQVSAQLAQSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLD 1726 Query: 83 RLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 ++ + + +N + I +L G GLNL G Sbjct: 1727 IVEHDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTLVGGLGLNLT-G 1785 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ M + + R + G K+ V VY LI +N+++E ++ + K Sbjct: 1786 ADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKI 1840 Query: 189 TIQDLLLNALKK 200 + +++A Sbjct: 1841 LTANTVVSAENA 1852 >gi|197387226|ref|NP_001127992.1| helicase ARIP4 [Rattus norvegicus] gi|149018631|gb|EDL77272.1| Rad54 like 2 (S. cerevisiae) (predicted) [Rattus norvegicus] Length = 1299 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I ++N+ L + G+NL G N +V F W+ Sbjct: 781 YFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 839 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ ++Y L+A T+++ + R +K + D +++ L Sbjct: 840 -----CHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLN 892 >gi|327348460|gb|EGE77317.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ATCC 18188] Length = 1179 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + +H K+ L ++ K N +V F L + Sbjct: 966 KNDEWMHSGKVDKLCELLTRFKENGDRTLVFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 1025 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ T+ ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 1026 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDVQA 1079 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G RAV V L+ ++TI+E + +TK + + Sbjct: 1080 ENRAHRVGQTRAVEVVRLVTRDTIEEQMYALGQTKLALDQRV 1121 >gi|303311897|ref|XP_003065960.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240105622|gb|EER23815.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1048 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 54/158 (34%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 KI+ L I+++ IV F S L +++ R ++ Sbjct: 797 SSTKIRHLLRILKREAGEFKFIVFSVFTSMLDKIEPFLESAGIGYARYDGGMRNGLREAS 856 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + +L + GLNL + +V +W+ +E + R + Sbjct: 857 LEKLRHSSSTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEEQAIDRVHRL 910 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY + ++T++E +L K + + Sbjct: 911 NQTVDVKVYKMTIKDTVEERILDLQERKRELASATIEG 948 >gi|82914943|ref|XP_728905.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23485550|gb|EAA20470.1| DOMINO B-related [Plasmodium yoelii yoelii] Length = 1732 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 75/211 (35%), Gaps = 31/211 (14%) Query: 1 MKQYHKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 ++ Y + +L ++ N+ Q + K+ A Sbjct: 1360 VQNYSHISKIEDLIKKIKKATRVYHNAF-----LKQ-----SIIFPLNKDISLGSGKLFA 1409 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 LE ++ K ++ F L L+ +++ + ++N Sbjct: 1410 LEKLLSKCKKEGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNN 1469 Query: 107 GKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K + + S G+NL N+++F+ W+ I++ + R + G + V Sbjct: 1470 DKSYFIFISSTRSGSIGINLTA-ANVVIFYDTDWNPS-----IDKQAMDRCHRIGQTKDV 1523 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ + + T++E + ++ K + ++ +N Sbjct: 1524 HVFRFVCEYTVEENIWKKQLQKRKLDNICIN 1554 >gi|301321598|gb|ADK68988.1| Superfamily II DNA/RNA helicase, SNF2 family [Gordonia sp. KTR9] Length = 735 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 31/222 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------------EEKHW 48 Y D IEA N K LQ A GAVY D + Sbjct: 504 AYDAV---TLDDASAHYIEAVNGGVLRNKLLQFAAGAVYIDLDKGADGYAKATSLTSRPT 560 Query: 49 KEVHDEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP-----C 99 ++H K + I ++ +++AY F+ + L + L Sbjct: 561 LQLHSAKFDKVIDICDQHFATGGDGSVLIAYRFDFEKTILIDRLRRAGYLGARAYNGMPD 620 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 T + WN G+IP++ HPAS GHGLNLQ+GG+ L++ +L E + Q R+ + Sbjct: 621 TKKAWNRGEIPVMLVHPASAGHGLNLQFGGHTLIWTTLPDSNEHYGQTPARL-----NRL 675 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V V+ ++ +NTID + L K Q+ L+ A + E Sbjct: 676 GQTKPVVVHTILTENTIDMAMPGALSDKQASQERLMQATRSE 717 >gi|218189165|gb|EEC71592.1| hypothetical protein OsI_03975 [Oryza sativa Indica Group] Length = 1270 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 17/141 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 IV + L ++ + ++++N ++ ++ + Sbjct: 1117 KAIVFSQWTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNTNPEVSVMIMSLKA 1176 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E V R + G R V V L ++T+++ Sbjct: 1177 ASLGLNMVAACH-VLLLDLWWNPTT-----EDQAVDRAHRIGQTRPVTVSRLTIKDTVED 1230 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +L K + K Sbjct: 1231 RILALQEKKREMVASAFGEDK 1251 >gi|195339573|ref|XP_002036392.1| GM12170 [Drosophila sechellia] gi|194130272|gb|EDW52315.1| GM12170 [Drosophila sechellia] Length = 611 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 66/183 (36%), Gaps = 19/183 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ----- 85 ++ Y + K + L+ ++ K +++ F L ++ Sbjct: 398 QMMSKHEFYDVKIPDNLICDSGKFRYLDTLLPKLKEEGHRVLLFSQFTMMLDIVEEYLRI 457 Query: 86 -----KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ++ I ++N + I + + G G+NL ++ + + Sbjct: 458 RKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIH-DIDF 516 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + ++ R + G +R V +Y LI+++TI+E +L K ++ + + K Sbjct: 517 NP-----YNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEK 571 Query: 200 KET 202 E Sbjct: 572 GEV 574 >gi|119479961|ref|XP_001260009.1| DNA excision repair protein (Rad26L), putative [Neosartorya fischeri NRRL 181] gi|119408163|gb|EAW18112.1| DNA excision repair protein (Rad26L), putative [Neosartorya fischeri NRRL 181] Length = 1077 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + + K+ + AN ++V H L LQ F T Sbjct: 680 NYANPEFCGKWKVLRKLLKWWHANGDKVLVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMT 739 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + E+N + K + S G GLN+ N +V W+ + Sbjct: 740 YEERTKVVDEFNSDPKQFVFLISTRSGGVGLNITS-ANKVVVVDPNWNPSH-----DLQA 793 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ LI+ TI+E+V R K + Sbjct: 794 QDRAYRIGQSRNVEVFRLISAGTIEEIVYARQIYKQQQAN 833 >gi|21622371|emb|CAD37001.1| related to DNA repair protein RAD26 [Neurospora crassa] Length = 1178 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 17/157 (10%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + + KI + + ++V H L LQ F + ++ Sbjct: 576 NPEFCGKWKILRKLLRFWHESGDKVLVFSHSVRLLRILQHLFHNTSYNVSFLDGALSYEE 635 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + E+N + + + + G GLN+ N +V F W+ + R Sbjct: 636 RQRVVDEFNTDPRQFVFLISTKAGGVGLNITS-ANKVVIFDPHWNPS-----YDLQAQDR 689 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G R V V+ L++ TI+E+V R K + Sbjct: 690 AYRIGQIRDVDVFRLVSAGTIEEIVYARQIYKQQQAN 726 >gi|301767248|ref|XP_002919008.1| PREDICTED: helicase ARIP4-like [Ailuropoda melanoleuca] Length = 1465 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I ++N+ L + G+NL G N +V F W+ Sbjct: 780 YFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 838 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 839 -----CHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLN 891 >gi|281338061|gb|EFB13645.1| hypothetical protein PANDA_007611 [Ailuropoda melanoleuca] Length = 1424 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I ++N+ L + G+NL G N +V F W+ Sbjct: 739 YFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 797 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 798 -----CHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLN 850 >gi|194221261|ref|XP_001495142.2| PREDICTED: RAD54-like 2 (S. cerevisiae) [Equus caballus] Length = 1466 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I ++N+ L + G+NL G N +V F W+ Sbjct: 781 YFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 839 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 840 -----CHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLN 892 >gi|190345413|gb|EDK37294.2| hypothetical protein PGUG_01392 [Meyerozyma guilliermondii ATCC 6260] Length = 888 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 37/207 (17%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKE----------------VHDEKIKALEVIIE 64 ++ N E +E K+ L ++ Sbjct: 549 SRGGILGLITLFKKICNSPSLLAPEGKVEESELSGSDFGLNVELNNKTSGKLLVLIPLLL 608 Query: 65 KAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN---EGKI 109 + +++ ++ L L+++ + + + ++N Sbjct: 609 EIQRLGEKVVLVSNYTQTLKLLEQSVNKLNMKSLRLDGTTANKERDKLVNQFNKSSAEST 668 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL G + L+ F W+ ++ + R + G KR VF+Y Sbjct: 669 MIFLLSAKAGGVGLNL-VGASRLILFDNDWNPS-----VDLQAMARIHRDGQKRPVFIYR 722 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+ IDE + QR K+ + D L+ Sbjct: 723 LLTTGCIDEKIFQRQLMKNNLSDKFLD 749 >gi|73985395|ref|XP_533811.2| PREDICTED: similar to steroid receptor-interacting SNF2 domain protein isoform 1 [Canis familiaris] Length = 1467 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I ++N+ L + G+NL G N +V F W+ Sbjct: 782 YFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 840 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 841 -----CHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLN 893 >gi|73985399|ref|XP_860644.1| PREDICTED: similar to steroid receptor-interacting SNF2 domain protein isoform 3 [Canis familiaris] Length = 1395 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I ++N+ L + G+NL G N +V F W+ Sbjct: 710 YFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 768 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 769 -----CHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLN 821 >gi|296417576|ref|XP_002838429.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634367|emb|CAZ82620.1| unnamed protein product [Tuber melanosporum] Length = 1062 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 55/151 (36%), Gaps = 17/151 (11%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLL 112 ++A IV F S L ++ Q + + ++ + ++ Sbjct: 901 WISSAKKTIVFSQFTSLLDLIEIPIHQKGWTYRRYDGGMTSTARNEALTEFTDDPSVNII 960 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + GLNL + ++ +++ IE + R + G +R V V+ LI Sbjct: 961 LVSLKAGNSGLNLVA-ASQVIILDPFYNP-----FIENQAIDRAHRIGQQRKVRVHKLIV 1014 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 T+++ VL K + + L+ + I Sbjct: 1015 AGTVEDRVLALQEEKRKLIEGALDEKASQGI 1045 Score = 38.6 bits (88), Expect = 0.50, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 16/66 (24%), Gaps = 10/66 (15%) Query: 4 YHKFQRELYCDLQG----ENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y Q + + N ++ Q + EV D K Sbjct: 623 YQALQDKSKILYNKYLRAGTVGRNYSNILVLLLRLRQACCHPHLIRD----IEVADAKKP 678 Query: 58 ALEVII 63 + +I Sbjct: 679 FDDQMI 684 >gi|189535029|ref|XP_687332.3| PREDICTED: helicase ARIP4 [Danio rerio] Length = 1437 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 52/147 (35%), Gaps = 9/147 (6%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLL 112 + +E + + N + + I ++N+ + + Sbjct: 750 LTVIEDFLSRRPMPIQTETGTHNWVRNINYYRLDGSTSASERERLINQFNDPANTQAWVF 809 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G+NL G N +V F W+ + V R + G ++ +Y L+ Sbjct: 810 LLSTRAGCLGVNL-IGANRVVVFDASWNP-----CHDAQAVCRVYRYGQRKPCHIYRLVC 863 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 T+++ + R +K + D +++ L Sbjct: 864 DFTLEKKIYDRQVSKQGMSDRVVDDLN 890 >gi|94732329|emb|CAK11033.1| novel protein similar to human and mouse steroid receptor-interacting SNF2 domain protein (Srisnf2l) [Danio rerio] Length = 1305 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 52/147 (35%), Gaps = 9/147 (6%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLL 112 + +E + + N + + I ++N+ + + Sbjct: 618 LTVIEDFLSRRPMPIQTETGTHNWVRNINYYRLDGSTSASERERLINQFNDPANTQAWVF 677 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G+NL G N +V F W+ + V R + G ++ +Y L+ Sbjct: 678 LLSTRAGCLGVNL-IGANRVVVFDASWNP-----CHDAQAVCRVYRYGQRKPCHIYRLVC 731 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 T+++ + R +K + D +++ L Sbjct: 732 DFTLEKKIYDRQVSKQGMSDRVVDDLN 758 >gi|242207274|ref|XP_002469491.1| predicted protein [Postia placenta Mad-698-R] gi|220731520|gb|EED85364.1| predicted protein [Postia placenta Mad-698-R] Length = 1300 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 72/177 (40%), Gaps = 25/177 (14%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ 90 LQ+A + + K++ L ++ + I++ L L+ Sbjct: 1081 LQIA------FPDPSLLQYDCGKLQELARLLRERKAGGHRILIFTQMTKILDILEIFLNL 1134 Query: 91 G----------RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ++ + +N + +I + S G G+NL G + ++F+ + Sbjct: 1135 HGYLYLRLDGATKIEDRQYITERFNSDSRIFCFISSSRSGGVGINLT-GADTVIFYDSDF 1193 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + ++R R + G R V +Y I+++T++E +L++ K ++ ++++ Sbjct: 1194 NPQ-----MDRQCEDRAHRIGQIRDVHIYRFISEHTVEEALLRKANQKRSLDNIVIQ 1245 >gi|213408777|ref|XP_002175159.1| chromodomain helicase hrp1 [Schizosaccharomyces japonicus yFS275] gi|212003206|gb|EEB08866.1| chromodomain helicase hrp1 [Schizosaccharomyces japonicus yFS275] Length = 1354 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 78/226 (34%), Gaps = 37/226 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 + Y Y L G + + V+ + +N + + + Sbjct: 579 QLYKNILTRNYRALSGAAAGNAHVSLLNIVVELKKASNHPYLFPGVQEKWMIGRKNTRED 638 Query: 52 -------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----- 97 + K+ L+ +++ K + +++ L L + + Sbjct: 639 KLRGIVMNSGKMVLLDKLLQRLKQDGHRVLIFTQMVKVLNILAEYMNLRGYNFQRLDGTI 698 Query: 98 -----PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I +N P + + G G+NL + ++ F W+ + + Sbjct: 699 PAPVRRLAIDHFNSPDSPDFVFLLSTRAGGLGINL-STADTVIIFDSDWNPQA-----DL 752 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G K V VY ++++T++E +L+R R K ++ +++ Sbjct: 753 QAMARAHRIGQKNHVSVYRFLSKDTVEEDILERARRKMILEYAIIS 798 >gi|171694309|ref|XP_001912079.1| hypothetical protein [Podospora anserina S mat+] gi|170947103|emb|CAP73908.1| unnamed protein product [Podospora anserina S mat+] Length = 1203 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 17/157 (10%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 + + K+ + +N ++V H L L+ F + ++ Sbjct: 734 NPEFCGKWKVLKKLLQFWHSNGDKVLVFSHSVRLLRILRHLFNNTNYNVSFLDGSLSYEE 793 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + E+N + + + G GLN+ N +V F W+ + R Sbjct: 794 RQNVVDEFNTDPAQFVFLISTKAGGVGLNITS-ANKVVIFDPHWNPA-----YDLQAQDR 847 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G R V V+ LI+ TI+E+V R K + Sbjct: 848 AYRIGQIRDVDVFRLISAGTIEEIVYARQIYKQQQAN 884 >gi|300708513|ref|XP_002996434.1| hypothetical protein NCER_100481 [Nosema ceranae BRL01] gi|239605736|gb|EEQ82763.1| hypothetical protein NCER_100481 [Nosema ceranae BRL01] Length = 858 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 65/157 (41%), Gaps = 18/157 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + K+ L+ ++ K +++ + + ++ + + Sbjct: 698 IDSGKLACLDKLLTKLKQENHRVLIYFQMTKMMDLVEDYCVKKEFTYCRLDGSSKVSYRR 757 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 T+ +W G + + G G+NL + ++F+ W+ +++ + R + Sbjct: 758 DTVNDWQTGDKFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----VDQQAMDRAYR 811 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY LI +NTI+E V+++ K +Q +++ Sbjct: 812 IGQTKDVTVYRLITKNTIEERVIEKATHKGNLQKMVI 848 >gi|224125738|ref|XP_002319663.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222858039|gb|EEE95586.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1404 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 73/207 (35%), Gaps = 24/207 (11%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 +L + + ++ + L V + V + I L++I + Sbjct: 1008 DLLLENNYKEVDYSGKMVLLLDIL------VMSSDVGDKTLVFTQSIPTLDLIELYLSRL 1061 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWNEG---KIPLLFAHPASCGHGLNL 125 P + GRT + ++ +N+ ++ + G+NL Sbjct: 1062 PRLGKKG-KFWRKGKDWYRLDGRTESSERQRLVERFNDPKNKRVKCTLISTRAGSLGINL 1120 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 Y N +V W+ + + R + G + VF Y L+A T++E + +R Sbjct: 1121 -YAANRVVIVDGSWNPT-----YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 1174 Query: 186 TKSTIQDLLLNAL-------KKETIHV 205 TK + +++ ++E +H+ Sbjct: 1175 TKEGLAARVVDRQQVYRTISREEMLHL 1201 >gi|238496023|ref|XP_002379247.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Aspergillus flavus NRRL3357] gi|220694127|gb|EED50471.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Aspergillus flavus NRRL3357] Length = 917 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 70/213 (32%), Gaps = 33/213 (15%) Query: 15 LQGENIEAFNSAS-KTVKCLQLANGAVYY-------DEEKHWKEVHDEKIKALEVIIEKA 66 L+ + + S ++ + + E + K L +++ Sbjct: 478 LEYSEKKKYRILSNILMELRKCSIHPYLLDDAIPDPYELGAHVITNSGKYIVLLKMVQHF 537 Query: 67 ---NAAPIIVAYHFNS----------------DLARLQKAFPQGRTLDKDPCTIQEWNEG 107 II+ +FN D R + ++ N+ Sbjct: 538 VLERGRKIIIFSNFNQALNLCEDLLLTIQKNGDPVRYVRLDGSTSNARRNLSIYLFQNDP 597 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + + G GLNL + ++F W+ + + R R + G K V + Sbjct: 598 RYMVFLISIRAGGEGLNLVS-SSTVIFLDEDWNPQ-----VMRQAEARVHRIGQKHPVRI 651 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + L ++ T++E + +R+ K+ + ++ + Sbjct: 652 FKLQSKGTVEEQISRRIVKKAYVATKIMEDINA 684 >gi|73998070|ref|XP_859242.1| PREDICTED: similar to helicase, lymphoid-specific isoform 3 [Canis familiaris] Length = 386 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 60/161 (37%), Gaps = 19/161 (11%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 + K L+ ++ + +++ L L + + Sbjct: 232 NSGKFLILDRMLPELKARGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREK 291 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + + + + G G+NL + ++ + W+ + + R + Sbjct: 292 NMHSFNTDPDVFIFLVSTRAGGLGINLTA-ADTVIIYDSDWNPQS-----DLQAQDRCHR 345 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + V VY L+ NTID+ +++R K ++ L+++ K Sbjct: 346 IGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIHKSK 386 >gi|307183105|gb|EFN70022.1| TATA-binding protein-associated factor 172 [Camponotus floridanus] Length = 1883 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 7/120 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + +N + I +L G GLNL G + ++F Sbjct: 1690 THLPTVTYLRLDGSVPAAQRHSVVARFNADPSIDVLLLTTQVGGLGLNLT-GADTVIFVE 1748 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY LI ++T++E ++ + K + +++ Sbjct: 1749 HDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRSTVEEKIMGLQKFKLLTANTIIS 1803 >gi|67967643|dbj|BAE00304.1| unnamed protein product [Macaca fascicularis] Length = 644 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 75/248 (30%), Gaps = 56/248 (22%) Query: 1 MKQYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-------- 50 ++ Y K LQG + + +L N KE Sbjct: 292 IELYRKLLNSQVVRFCLQGLLENSPH-LICIGALKKLCNHPCLLFNSIKEKECSTCDKNE 350 Query: 51 -----------------------VHDEKIKALEVIIEKANA----APIIVAYHFNSDLA- 82 K++ L ++ + +++ ++ L Sbjct: 351 EKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNV 410 Query: 83 RLQKAFPQGRTLDK---------DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNI 131 + G + + +N + + G GLNL GG+ Sbjct: 411 LQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNL-IGGSH 469 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+ + + W+ + ++R + G K V +Y L+ TI+E + QR +K + Sbjct: 470 LILYDIDWNPAT-----DIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLC 524 Query: 192 DLLLNALK 199 +++ K Sbjct: 525 GAVVDLTK 532 >gi|328869121|gb|EGG17499.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1301 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 68/224 (30%), Gaps = 42/224 (18%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------------------- 52 +++ + + + ++A+ EE Sbjct: 789 AEVKNALNKTSSPLAALTVLKKIADHPALIHEEMKTCNTPEMLDIMKQIGENQTIKSLVR 848 Query: 53 -DEKIKALEVIIE--KANAAPIIVAYHFNSDLA------------RLQKAFPQGRTLDKD 97 K++ L ++ K I++ L L+ T ++ Sbjct: 849 NSGKMQFLYYLLPNLKQEGHRILIFSQSVKMLNAIQLLLDTLNLSYLRIDGSITSTKERQ 908 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + N+ GLNL + ++ F W ++ V R Sbjct: 909 KRIDEYNNDSSYFCFLLTIQVGALGLNLTS-ADRVLIFDPSWT------TVDNQAVDRVY 961 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V VY LI TI+E + ++ K ++ +LN K + Sbjct: 962 RIGQKRDVVVYRLITCGTIEEKIYRKQVFKGSLMKSMLNQDKGQ 1005 >gi|320039914|gb|EFW21848.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira] Length = 1048 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 54/158 (34%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 KI+ L I+++ IV F S L +++ R ++ Sbjct: 797 SSTKIRHLLRILKREAGEFKFIVFSVFTSMLDKIEPFLESAGIGYARYDGGMRNGLREAS 856 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + +L + GLNL + +V +W+ +E + R + Sbjct: 857 LEKLRHSSSTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEEQAIDRVHRL 910 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY + ++T++E +L K + + Sbjct: 911 NQTVDVKVYKMTIKDTVEERILDLQERKRELASATIEG 948 >gi|255725568|ref|XP_002547713.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240135604|gb|EER35158.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 847 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 69/198 (34%), Gaps = 28/198 (14%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK-----------ALEVIIEKANAA 69 +S + ++ N ++ +K + +EK ++ A Sbjct: 509 SGSDSFTLINLFKKICNSPSLLIDDAFFKRIVEEKFHLTLSSGKINVLIPLLLEIVAQKE 568 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 I++ ++ L L+K + ++++N I + S Sbjct: 569 KIVLISNYTQTLDLLEKVLSKINLTFSRLDGSTATNIRSKIVKQFNSNPNIHVFLLSSKS 628 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL G + L+ F W+ Q + RI + G + F+Y + IDE Sbjct: 629 GGMGINL-VGASRLILFDNDWNPATDLQSMSRI-----HRDGQTKPCFIYRIFTTGCIDE 682 Query: 179 LVLQRLRTKSTIQDLLLN 196 + QR K+ + L+ Sbjct: 683 KIFQRQLVKNRLSSKFLD 700 >gi|88811008|ref|ZP_01126264.1| helicase, Snf2 family protein [Nitrococcus mobilis Nb-231] gi|88791547|gb|EAR22658.1| helicase, Snf2 family protein [Nitrococcus mobilis Nb-231] Length = 572 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 63/183 (34%), Gaps = 18/183 (9%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 + + C+++ Y +++ E++ + + I+V + L ++ Sbjct: 128 LQQQLACMRMLCDTPYILDQECRVSPKLEELGRILDEQLAEPESKIVVFSEWTRRLELVR 187 Query: 86 KAFPQG-----------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + + + L + GLNLQ N+++ Sbjct: 188 EHVETAAFGYALHTGKVPQERRRQEINRFKQDPACR-LLLSSDAGATGLNLQA-ANVVIN 245 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 L W + I R + +R V V L+ +++I+ +L L K ++ + + Sbjct: 246 LDLPWSPARLEPRIAR-----AWRKHQRRHVSVINLVCEDSIEHRILHLLEQKRSLAEGV 300 Query: 195 LNA 197 L Sbjct: 301 LEG 303 >gi|328709714|ref|XP_001947872.2| PREDICTED: ATP-dependent helicase brm-like [Acyrthosiphon pisum] Length = 1638 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 71/231 (30%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 1058 LYKHMQSKGVLLTDGAEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQSIEEKYCEHIGTA 1117 Query: 53 ------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K +++ + ++ Sbjct: 1118 GNVVQGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLGWRGFAYLRL 1177 Query: 91 --GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++++N + L + G GLNLQ + ++ F W+ + Sbjct: 1178 DGTTKAEDRGDLLKKFNSAGSEYFLFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ--- 1233 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L+ N+++E +L R K + + ++ A Sbjct: 1234 --DLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1282 >gi|242058897|ref|XP_002458594.1| hypothetical protein SORBIDRAFT_03g036380 [Sorghum bicolor] gi|241930569|gb|EES03714.1| hypothetical protein SORBIDRAFT_03g036380 [Sorghum bicolor] Length = 1255 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 21/188 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI--KALEVIIEKANAAPIIVAYHFNSDLA 82 + + ++ + K + EK + I+ IV + L Sbjct: 1057 ALDILLSLPRI--DPTQMTDSKCSIGLESEKFDGRGTSEQIDTKLTEKAIVFSQWTRMLD 1114 Query: 83 RLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNI 131 L+ + ++++N ++ ++ + GLN+ + Sbjct: 1115 LLEVHLKASHVTYRRLDGTMSVAARDKAVKDFNTVPEVTVMIMSLKAASLGLNMVAACH- 1173 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ LWW+ E V R + G R V V L ++T+++ +L K + Sbjct: 1174 VLMLDLWWNPTT-----EDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEKKREMV 1228 Query: 192 DLLLNALK 199 K Sbjct: 1229 ASAFGEDK 1236 >gi|222619356|gb|EEE55488.1| hypothetical protein OsJ_03673 [Oryza sativa Japonica Group] Length = 1270 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 17/141 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 IV + L ++ + ++++N ++ ++ + Sbjct: 1117 KAIVFSQWTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNTNPEVSVMIMSLKA 1176 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E V R + G R V V L ++T+++ Sbjct: 1177 ASLGLNMVAACH-VLLLDLWWNPTT-----EDQAVDRAHRIGQTRPVTVSRLTIKDTVED 1230 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +L K + K Sbjct: 1231 RILALQEKKREMVASAFGEDK 1251 >gi|297802844|ref|XP_002869306.1| hypothetical protein ARALYDRAFT_328538 [Arabidopsis lyrata subsp. lyrata] gi|297315142|gb|EFH45565.1| hypothetical protein ARALYDRAFT_328538 [Arabidopsis lyrata subsp. lyrata] Length = 1221 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 71/222 (31%), Gaps = 32/222 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------- 54 + Y Y L + + + + ++ + + + E +E Sbjct: 466 EVYKAVITNNYQVLTKKRGAKIS--NVLMDLRKVCSHPYLLKDVEPRLEDANEAFTKLLE 523 Query: 55 -----KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPC 99 ++ ++ K +++ F L Q + Sbjct: 524 ASGKLQLLDKMMVKLKEQGHRVLIYSQFQHTLDLFQDYCSFKSWKYERIDGKVGGAERQA 583 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +I +N + G G+NL + ++ + W+ + + R Sbjct: 584 SIDRFNAENSNRFCFLLTTRAGGIGINL-ATADTVIIYDSDWNP-----HADLQAMARAH 637 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G V +Y LI + T++E +++ + K ++ L++ ++ Sbjct: 638 RLGQTNKVMIYRLIHRATVEERMVEITKKKMLLEHLVVGNME 679 >gi|325096446|gb|EGC49756.1| RING-13 protein [Ajellomyces capsulatus H88] Length = 1188 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 71/219 (32%), Gaps = 39/219 (17%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +R+ L+ + + + ++ L V KI+ I+ Sbjct: 971 KAVERKSLPQLKKNAARSAEAKREYMRYL-------------TDNWVTSAKIEKTMEILR 1017 Query: 65 KANAA---------PIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEW 104 + IV F S L + + ++ ++ Sbjct: 1018 DIQSRIPEGDDKPEKTIVFSQFTSLLDLLQVPIEREGWGYCRYDGSMQPSHRNEAVLRFS 1077 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ + GLNL + ++ +W+ +Q I+R + G R Sbjct: 1078 DSQNHTIMLISLKAGNSGLNLVA-ASQVIILDPFWNPYLEEQAIDR-----AHRIGQMRP 1131 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V V+ ++ T+++ +L+ K + + L+ ++I Sbjct: 1132 VMVHRILVHKTVEDRILELQDRKRALIEGALDETASKSI 1170 Score = 41.7 bits (96), Expect = 0.062, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 15/65 (23%), Gaps = 6/65 (9%) Query: 3 QYHKFQRELYC----DLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + L I N ++ Q D+ KI Sbjct: 786 LYEGLESKTQIRFNRYLDEGTIGRNYSNILVLLLRLRQACCHPHLIDDLGVEANAATAKI 845 Query: 57 KALEV 61 +E Sbjct: 846 DLIEN 850 >gi|119193650|ref|XP_001247431.1| hypothetical protein CIMG_01202 [Coccidioides immitis RS] Length = 1034 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 54/158 (34%), Gaps = 18/158 (11%) Query: 52 HDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPC 99 KI+ L I+++ IV F S L +++ R ++ Sbjct: 783 SSTKIRHLLRILKREAGEFKFIVFSVFTSMLDKIEPFLKSAGIGYARYDGGMRNDLREAS 842 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + +L + GLNL + +V +W+ +E + R + Sbjct: 843 LEKLRHSSSTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEEQAIDRVHRL 896 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY + ++T++E +L K + + Sbjct: 897 NQTVDVKVYKMTIKDTVEERILDLQERKRELASATIEG 934 >gi|324503939|gb|ADY41699.1| Chromodomain-helicase-DNA-binding protein 1-like protein [Ascaris suum] Length = 914 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 67/217 (30%), Gaps = 27/217 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-------KHWKEVHDE 54 K Y + + + + + A +D Sbjct: 264 KNYRFLSAAGCAQGDHQGGSRNSLVNIMTQLRKCALHPYLFDGMEPEPFKEGEHLATSSG 323 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC----------TIQ 102 K+ LE I+ + + +++ L +Q F R + I Sbjct: 324 KMMLLERILGFLRKHKHRVLLFSQMTRMLDIVQDYFNYRRWSFERLDGKLKADMRFTAID 383 Query: 103 EWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + G GL L G + ++F ++ + + R + G Sbjct: 384 NFQKSDSDVFCFLLSTRAGGLGLTLT-GADTVIFIDSDFNPQN-----DIQAAARCHRIG 437 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V + L+ +NT++E++ K + + ++ + Sbjct: 438 QTKHVKIIRLVTKNTVEEVIECYATRKLRMTNRVMES 474 >gi|154284692|ref|XP_001543141.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150406782|gb|EDN02323.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 214 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 58/142 (40%), Gaps = 15/142 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 +K + I++ ++ + F K + ++N + +L Sbjct: 1 MKEMLDIVQNDVLKKLLPSVQFLR--------LDGSVEATKRQSIVNQFNTDPSYDVLLL 52 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G + ++F W+ ++ + + R + G K+ V VY LI + Sbjct: 53 TTSVGGLGLNLT-GADTVIFVEHDWNPQK-----DIQAMDRAHRIGQKKVVNVYRLITRG 106 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 T++E +L R K + ++N Sbjct: 107 TLEEKILNLQRFKIDVASTVVN 128 >gi|219120207|ref|XP_002180847.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407563|gb|EEC47499.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 495 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 68/229 (29%), Gaps = 41/229 (17%) Query: 2 KQYHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 + Y + L + ++ + + ++ + N + Sbjct: 273 QYYRALYEKNVKFLHKNNKKALDGPSLNNLAMQLRKCCNHVFLLKGVEEEFRNKGSLTLS 332 Query: 53 --------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GR 92 K+ L+ ++ K+ ++V F L L+ F Sbjct: 333 EADFLVQGSGKLILLDKLLPRLKSEGHRVLVFSQFKIMLDILEDYFSMREMKFERIDGSI 392 Query: 93 TLDKDPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + I + +I ++ + G G+NL + + F W+ + Sbjct: 393 TGKRRQQAIDRFQAPEIDGRKPPFIMMLSTRAGGVGINLTA-ADTCIIFDSDWNPQN--- 448 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G + V VY L+ + T + + K + +L Sbjct: 449 --DLQAQARCHRIGQTKEVKVYRLLTRKTYEMQMFHMSSMKMGLDQAVL 495 >gi|115440307|ref|NP_001044433.1| Os01g0779400 [Oryza sativa Japonica Group] gi|53792212|dbj|BAD52845.1| putative ATPase [Oryza sativa Japonica Group] gi|113533964|dbj|BAF06347.1| Os01g0779400 [Oryza sativa Japonica Group] gi|215701396|dbj|BAG92820.1| unnamed protein product [Oryza sativa Japonica Group] Length = 1213 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 17/141 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 IV + L ++ + ++++N ++ ++ + Sbjct: 1060 KAIVFSQWTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNTNPEVSVMIMSLKA 1119 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E V R + G R V V L ++T+++ Sbjct: 1120 ASLGLNMVAACH-VLLLDLWWNPTT-----EDQAVDRAHRIGQTRPVTVSRLTIKDTVED 1173 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +L K + K Sbjct: 1174 RILALQEKKREMVASAFGEDK 1194 >gi|322707430|gb|EFY99008.1| DNA repair and recombination protein RAD5B [Metarhizium anisopliae ARSEF 23] Length = 769 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 63/166 (37%), Gaps = 20/166 (12%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDP 98 K +A+ I++ K + + +++ + S L +Q T +D Sbjct: 596 SSKTEAMMQILQATLKKDGSKVVIFSQWTSFLNIIQNQLDIAGIKYSRIDGSMNTEKRDR 655 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 N+ + ++ A A C GLNL + ++ WW IE + R + Sbjct: 656 AVRALDNDAETRVMLASLAVCSVGLNLVS-ADTVILSDSWWAPA-----IEDQAIDRVHR 709 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G R V+ LI + T++E VL + K + +++ H Sbjct: 710 LGQTRKTTVWRLIVEGTVEERVLDVQKEKRDLVTKAFQEKERKGKH 755 >gi|328768005|gb|EGF78053.1| hypothetical protein BATDEDRAFT_20594 [Batrachochytrium dendrobatidis JAM81] Length = 729 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 33 LQLANGAVYYDEEK--HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAF 88 QL K + K+ L+ ++ + I+V F L L+ Sbjct: 497 HQLCLKYKTLMPHKLSDKVIMDSCKLVKLKSMLLEMRAQGDKILVFSQFVIMLDILEPVM 556 Query: 89 PQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + N+ +I + S G G+NL N+++ + + Sbjct: 557 EHLGIKYLRLDGTTPVGIRQSMMDEFNNDPEITVFLLTTKSGGVGINLTS-ANVVIMYDI 615 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ + R + G RAV V+ LI N+I++ +L+ K + L Sbjct: 616 DYNP-----HNDAQAEDRAHRVGQTRAVTVHRLIMDNSIEQHILRLAEHKLELDAKL 667 >gi|156086958|ref|XP_001610886.1| DNA repair and recombination protein RAD54-like [Babesia bovis T2Bo] gi|154798139|gb|EDO07318.1| DNA repair and recombination protein RAD54-like , putative [Babesia bovis] Length = 824 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 31/228 (13%), Positives = 66/228 (28%), Gaps = 46/228 (20%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------------- 52 + + S + +++ N K Sbjct: 418 INSGEVVMTKSLGVILSLMKVCNHPGLIKPSPSKKPTKADELIKEIHANYNTLQKNRSCY 477 Query: 53 ---DEKIKALEVIIEKANA---APIIVAYHFNSDLARLQKAFPQGRTL----------DK 96 K L ++ I++ ++ L ++ Q K Sbjct: 478 PELSAKTLVLFRLLHNIRRTTSDRIVIISNYTQTLDVFERMCKQCNYPCVRLDGTLSIKK 537 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N+ + G G+NL G N LV F W+ ++ + Sbjct: 538 RHKLVTTFNDPNSHSFAFLLSSKAGGCGINL-IGANRLVLFDPDWNPAN-----DKQALA 591 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G ++ ++Y + TI+E + QR K + +L+ + E Sbjct: 592 RVWRDGQRKTCYIYRFFSTGTIEEKIYQRQICKDGLSAMLVTDGENEI 639 >gi|325117702|emb|CBZ53253.1| putative SNF2 family helicase [Neospora caninum Liverpool] Length = 1545 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 56/156 (35%), Gaps = 21/156 (13%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDK 96 + KI+ + I+ + ++ + + L +++ ++ Sbjct: 1361 MDSAKIRKMIEIVSEIKKKGEKALIFSQYTTYLDVVEECLTTFCGDIGKCRLDGSTAVED 1420 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + E+ ++ L + G GLNL ++ W+ + +R R Sbjct: 1421 RQALVDEFSTNPELTLFLLSTKAGGQGLNLTA-ARTVILMDQDWNPQN-----DRQAEDR 1474 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G + V +Y L + T++E +L+ + K + Sbjct: 1475 VHRLGQTQDVTIYRLCCRGTVEESILKCCQAKLDLD 1510 >gi|323453075|gb|EGB08947.1| hypothetical protein AURANDRAFT_53418 [Aureococcus anophagefferens] Length = 738 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 75/233 (32%), Gaps = 45/233 (19%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS--------KTVKCLQLANGAVYYDEEKHWKEVH- 52 K Y E L+ I A A+ + + AN + E + Sbjct: 425 KSYEALILER--KLKDSLIAAGIPATSHEVSEQNMLMNQRKNANHPFLFGEPRDANGEFI 482 Query: 53 -----------DEKIKALEVIIEK--ANAAPIIVAYHFNS------DLARLQKAFPQ--- 90 K + LE I+ K A +++ D R ++ Sbjct: 483 GVATPKALVNAAGKFRLLERILPKLKAQGHKVLLFSQMTELLNIIEDYLRWREWNYFRID 542 Query: 91 -GRTLDKDPCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 G L + I +N + + + G G+NL + ++ F W+ + Sbjct: 543 GGVELSERQRQIDAFNGEGQESNEYFVFMLSTRAGGLGINL-ATADTVILFDSDWNPHQ- 600 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G KR V VY + + + ++++ +K ++ + + Sbjct: 601 ----DAQAMDRAHRIGQKRDVVVYRFLTSGSAEIGMMEKQISKKKLERMAVQG 649 >gi|302791607|ref|XP_002977570.1| hypothetical protein SELMODRAFT_106921 [Selaginella moellendorffii] gi|300154940|gb|EFJ21574.1| hypothetical protein SELMODRAFT_106921 [Selaginella moellendorffii] Length = 492 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 67/228 (29%), Gaps = 36/228 (15%) Query: 4 YHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKH-------------W 48 Y DL N + ++ +L N D + Sbjct: 221 YRALYENRISDLIKGTQPSNMPNLRNMAMELRKLCNHPFLCDGLEEDFASKHANASSVSN 280 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L ++ + +++ F L L+ + Sbjct: 281 LVQSSGKMVLLNKLLPMLRDSNRRVLIFSQFTIMLDILEDYLSSEGYTFERIDGKIRGSE 340 Query: 98 --PCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I + N+ K + G G+ L + + + W+ + + + Sbjct: 341 RQQAAIDRYSANDCKTFAFLLSTRAGGLGITLTA-ADTCIIYDSDWNPQN-----DLQAM 394 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V +Y LI +NT ++ + + K + + +L ++ Sbjct: 395 ARCHRIGQTKDVRIYRLITRNTYEQHLFECSSRKYGLDEAVLGRFAED 442 >gi|302783170|ref|XP_002973358.1| hypothetical protein SELMODRAFT_50459 [Selaginella moellendorffii] gi|300159111|gb|EFJ25732.1| hypothetical protein SELMODRAFT_50459 [Selaginella moellendorffii] Length = 710 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 29/240 (12%), Positives = 61/240 (25%), Gaps = 55/240 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 + Y F R ++ + ++ + + Sbjct: 278 QMYTAFLRSETAQGSLAGSAKGSALAALTILKKICDHPLLLTKRATDDVVEGLEYLDSTD 337 Query: 43 ----------------DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL 84 E H KI L ++E +V L + Sbjct: 338 IAAAEAMRKSLAGLAEPEPDSDGNKHSCKIVFLMALLENLVQEGHRTLVFAQTLKMLDII 397 Query: 85 Q----------KAFPQGRTLDKDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNIL 132 Q + ++++ + G GL L + + Sbjct: 398 QEEITKRRYSFCRIDGKTKGSERQRIVEDFQTDGCTVSIFLLTSQVGGLGLTLTA-ADRV 456 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V W+ + Q ++R + G R V VY L+ T++E + ++ K + Sbjct: 457 VIVDPAWNPSKDNQSVDR-----AYRIGQLRDVIVYRLMTSGTLEEKIYRKQVFKGGLMK 511 >gi|42766595|gb|AAS45429.1| prophage-encoded helicase [Selenomonas ruminantium] Length = 126 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 7/126 (5%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 Y F + R+++ I +WN GKIP+ HPAS GHGLNLQ GG+IL++ Sbjct: 1 YWFKHEAERIRERLKVREIQTSRD--IADWNAGKIPVALIHPASAGHGLNLQEGGSILIW 58 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 FSL W LE +QQ R+ + G K V + ++ + TID V++ L K Q L Sbjct: 59 FSLTWSLELYQQTNARL-----YRQGQKDTVSIIHITTEGTIDGDVMKALERKDKTQTAL 113 Query: 195 LNALKK 200 + A+K Sbjct: 114 IEAVKA 119 >gi|254565555|ref|XP_002489888.1| Protein whose overexpression affects chromosome stability, potential Cdc28p substrate [Pichia pastoris GS115] gi|238029684|emb|CAY67607.1| Protein whose overexpression affects chromosome stability, potential Cdc28p substrate [Pichia pastoris GS115] gi|328350301|emb|CCA36701.1| putative SNF2 family helicase/ATPase [Pichia pastoris CBS 7435] Length = 1009 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 17/168 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA-----------FP 89 +E+ + +K+K L I +++ F L ++ Sbjct: 813 KLEEKSFMQSGKVQKLKELLDKIIFEREEKVLIFSLFTQVLDIIEVVLSVLKIKFLRLDG 872 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 Q + + + + IP+ + G G+NL N ++ F ++ + + Sbjct: 873 QTSVDIRQDIIDKFYEDETIPVFLLSTKAGGFGINL-VCANNVIIFDQSFNPHD-----D 926 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V VY ++ +NTIDE +LQ K + + + Sbjct: 927 KQAEDRAHRVGQTKEVNVYRMVTKNTIDESILQLALNKLQLDSTVSDD 974 >gi|296826202|ref|XP_002850936.1| SHREC complex subunit Mit1 [Arthroderma otae CBS 113480] gi|238838490|gb|EEQ28152.1| SHREC complex subunit Mit1 [Arthroderma otae CBS 113480] Length = 1445 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 23/206 (11%), Positives = 65/206 (31%), Gaps = 31/206 (15%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-------------VIIE 64 + E N + ++ + Y + + V+ + + Sbjct: 870 KQSERHNLNNILMQLRKCLCHPFIYSKAIEDRGVNSTLLHRNMVEASSKLQLLELLLPKL 929 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLL-- 112 + +++ F L ++ + I +N Sbjct: 930 QERGHRVLIFSQFLDFLDIVEDFLDGLSLEHLRLDGRMNSLQKQKNIDAFNAPDSEYFAF 989 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + +V ++ + + ++R + G K+ V V+ L+ Sbjct: 990 LLSTRAGGVGINL-ATADTVVILDPDFNPHQ-----DIQALSRAHRIGQKKKVMVFQLMT 1043 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 + + +E ++Q + K + +L+ + Sbjct: 1044 RGSAEEKIMQIGKKKMALDHVLIERM 1069 >gi|168022943|ref|XP_001763998.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162684737|gb|EDQ71137.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 719 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 65/209 (31%), Gaps = 28/209 (13%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK-----------EVHDEKIKA 58 E + + + S ++ + N + + K+ Sbjct: 412 EYFAEKGNRAMLKAQLNSVCMQLRKNCNHPDLFHSHFEDDINYPPVDELVAQCAKFKLMD 471 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK 108 ++ + +++ L L+ G I+ +NE K Sbjct: 472 RLLVKLRERGHKVLIFSQMTKILDLLEYYLEERGHNPCRIDGGVQQSVRQEQIRSFNEEK 531 Query: 109 IP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL + ++ + W+ ++ + R + G R V V Sbjct: 532 SRFVFLLSTRAGGLGINLTA-ADTVILYDSDWNP-----HMDMQAMDRCHRIGQTRPVHV 585 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y L +++ +L+ K ++ L++ Sbjct: 586 YRLATAKSVECHMLKVATGKLKLEHLVIE 614 >gi|53792213|dbj|BAD52846.1| putative ATPase [Oryza sativa Japonica Group] Length = 1228 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 17/141 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 IV + L ++ + ++++N ++ ++ + Sbjct: 1075 KAIVFSQWTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNTNPEVSVMIMSLKA 1134 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E V R + G R V V L ++T+++ Sbjct: 1135 ASLGLNMVAACH-VLLLDLWWNPTT-----EDQAVDRAHRIGQTRPVTVSRLTIKDTVED 1188 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +L K + K Sbjct: 1189 RILALQEKKREMVASAFGEDK 1209 >gi|116179964|ref|XP_001219831.1| hypothetical protein CHGG_00610 [Chaetomium globosum CBS 148.51] gi|88184907|gb|EAQ92375.1| hypothetical protein CHGG_00610 [Chaetomium globosum CBS 148.51] Length = 1793 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 77/221 (34%), Gaps = 31/221 (14%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DE 54 + R ++ + + E + ++ ++ + Y + + Sbjct: 1098 ELIRSVFVQGKMKAHERGSLSNILMQLRKCLCHPFIYSQAIEDRTTSAELTRRNLVEASS 1157 Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQ 102 K+ LE+++ K +++ F L L+ + I Sbjct: 1158 KLMLLEIMLPKLKERGHRVLLFSQFLDQLTVLEDFLAGLGLRHERLDGSQSSMEKQSKID 1217 Query: 103 EWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N I ++ + G G+NL + ++ W+ + + ++R + G Sbjct: 1218 AFNAPDSDIFVMLLSTRAGGVGINL-ATADTVIILDPDWNPHQ-----DIQALSRAHRIG 1271 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++ V + L+ ++ +E +LQ R K + LL+ + E Sbjct: 1272 QRKKVLCFQLMTVDSAEEKILQIGRKKLALDHLLIETMDNE 1312 >gi|66811390|ref|XP_639875.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60466825|gb|EAL64871.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 989 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 78/236 (33%), Gaps = 61/236 (25%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVY-------------------------------YDE 44 G + + S S +L N Y E Sbjct: 561 GGGSRGSATSLSTITLLKKLCNSPSLLLLNNKQDEGGEQQQTEIQNILKKHNYTLENYQE 620 Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GR 92 + ++ K+ +E +I++ +++ +F L ++ + Sbjct: 621 IQEQQDNESGKLLFVESLIKQLKPMNEKLVLVSNFTKTLDVFERLCKRLSIDTLRLDGDV 680 Query: 93 TLDKDPCTIQEWNEG------------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 D + ++N + + + G G+NL GGN LV + W+ Sbjct: 681 KADSRQALVDKFNSSTQNVSSSKSSSSQYQVFLLSAKAGGVGINL-IGGNHLVLYDPDWN 739 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I+ + R + G + VF+Y L + TI+E + QR K +I + +++ Sbjct: 740 PA-----IDIQAMERIWREGQTKPVFIYRLFSTGTIEEKIYQRQLMKESISNSIVD 790 >gi|328856433|gb|EGG05554.1| hypothetical protein MELLADRAFT_87820 [Melampsora larici-populina 98AG31] Length = 593 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 72/220 (32%), Gaps = 42/220 (19%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------------HDEKIKALE------ 60 E+ +L N A E + + +D K+ Sbjct: 219 ESSQQLVLINTLKKLCNSAGLLINETSIQNLAKNASTLFPAWVTRNDIKLSGKMIALASF 278 Query: 61 -VIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKI 109 I+ II+ +F S L ++ K +Q +N Sbjct: 279 LKILHAKTDEKIILVSNFTSTLDVIEAHCRSQNYSLCRLDGKTPQTKRDDIVQTFNRMTA 338 Query: 110 P---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + S G GLNL G + L+ F W+ + + R + G K+A Sbjct: 339 RSQFVFLLSSKSGGVGLNL-IGASRLILFDSDWNPAT-----DLQAMARIWRQGQKKACH 392 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKETIH 204 +Y +A TIDE + QR TK+ + L+ + +E + Sbjct: 393 IYRFLATGTIDECIFQRQVTKTGLATDLIKDAGVSREVLD 432 >gi|6320541|ref|NP_010621.1| Swr1p [Saccharomyces cerevisiae S288c] gi|6136666|sp|Q05471|SWR1_YEAST RecName: Full=Helicase SWR1; AltName: Full=Swi2/Snf2-related 1 gi|1230661|gb|AAB64770.1| Ydr334wp [Saccharomyces cerevisiae] gi|151942310|gb|EDN60666.1| SWR1 complex component [Saccharomyces cerevisiae YJM789] gi|285811352|tpg|DAA12176.1| TPA: Swr1p [Saccharomyces cerevisiae S288c] Length = 1514 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 71/188 (37%), Gaps = 19/188 (10%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 N + QL +K + K++ L +++++ N ++ Sbjct: 1215 QNCFEVSNPLHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKV 1274 Query: 81 LA-RLQKAFPQGRTLDK---------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 L Q G + + +N + +I + S G G+NL G Sbjct: 1275 LDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLT-GA 1333 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F+ W+ +++ R + G R V +Y ++++TI+ +L++ K Sbjct: 1334 DTVIFYDSDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQ 1388 Query: 190 IQDLLLNA 197 + ++++ Sbjct: 1389 LDNVVIQE 1396 >gi|190404725|gb|EDV07992.1| helicase SWR1 [Saccharomyces cerevisiae RM11-1a] Length = 1514 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 71/188 (37%), Gaps = 19/188 (10%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 N + QL +K + K++ L +++++ N ++ Sbjct: 1215 QNCFEVSNPLHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKV 1274 Query: 81 LA-RLQKAFPQGRTLDK---------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 L Q G + + +N + +I + S G G+NL G Sbjct: 1275 LDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLT-GA 1333 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F+ W+ +++ R + G R V +Y ++++TI+ +L++ K Sbjct: 1334 DTVIFYDSDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQ 1388 Query: 190 IQDLLLNA 197 + ++++ Sbjct: 1389 LDNVVIQE 1396 >gi|50288685|ref|XP_446772.1| hypothetical protein [Candida glabrata CBS 138] gi|49526080|emb|CAG59699.1| unnamed protein product [Candida glabrata] Length = 1408 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 22/169 (13%) Query: 52 HDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQK------------AFPQGRTLD 95 K+ +I K +++ II+ F + L L+ Sbjct: 1230 PSTKMNQCMDVINKVFEKSDSEKIIIFSQFTTFLDLLEHILATRLKISCLKYTGDMNAKV 1289 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + ++E +L + GL L N +V +W+ +E R Sbjct: 1290 RSEIISRFYSEEDKRVLLISMKAGNSGLTLT-CANHVVIVDPFWNP-----YVEEQAQDR 1343 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + R V V+ L +N++++ +L+ + K + D ++A K + I+ Sbjct: 1344 CYRISQTREVTVHRLFIKNSVEDRILELQKLKRDMVDAAMDAKKIKDIN 1392 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 4/47 (8%), Positives = 14/47 (29%), Gaps = 5/47 (10%) Query: 1 MKQYHKFQ---RELYCDLQGENI--EAFNSASKTVKCLQLANGAVYY 42 ++ Y + ++L L + + + ++ Q Sbjct: 1024 LEFYKALEHKNKQLAKKLLESKVQGNYSSVLTLLLRLRQACCHPELV 1070 >gi|148230804|ref|NP_001085120.1| RAD54 homolog B [Xenopus laevis] gi|47939775|gb|AAH72215.1| MGC81308 protein [Xenopus laevis] Length = 895 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 73/245 (29%), Gaps = 54/245 (22%) Query: 3 QYHKFQRELYCD--LQGENIEAFNSASKTVKCLQLANGA------VYYDEEKHWKEVHDE 54 Y + L G + + +L N + + H Sbjct: 541 LYRRLLNSRAVKSCLLGNGENSPH-LVCIGALKKLCNHPCLLFRTIQEKSTNPDQGEHSL 599 Query: 55 KIKALEVIIEKANAAPI---------------------------IVAYHFNSDLARLQKA 87 E+ + + A I ++ H+ L LQ Sbjct: 600 YESIAELFPQDYDGAKISESESGKLLVLSKLLSGIRELSPSERVVLVSHYTQTLNILQAL 659 Query: 88 FPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFF 135 Q + + + +N + + G GLNL G + L+ + Sbjct: 660 CVQHGYSCTRLDGQTPVTQRQHIVDGFNSKYSSDFIFLLSSKAGGVGLNL-IGASHLILY 718 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + W+ + + R + G +R V +Y L+ +++E + QR +K + ++ Sbjct: 719 DIDWNPAN-----DIQAMARVWRDGQRRTVHIYRLLTTGSLEEKIYQRQISKQGLSGAVV 773 Query: 196 NALKK 200 + KK Sbjct: 774 DLTKK 778 >gi|328702354|ref|XP_003241882.1| PREDICTED: TATA-binding protein-associated factor 172-like [Acyrthosiphon pisum] Length = 1782 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 77/249 (30%), Gaps = 59/249 (23%) Query: 2 KQYHKFQRELY------CDLQGENIE----AFNSASKTVKCLQLANGAVYYDEEKHWKE- 50 + Y F + + +++ N + N +H + Sbjct: 1472 QLYEDFSKTHIHKHLSETETDEKSVNNPPNKNNILQALRYLQNVCNHPKLVLTPQHPQYS 1531 Query: 51 ----------------VHDEKIKALEVIIEKA------------NAAPIIVAYHFNSDLA 82 H K+ AL+ ++ + ++ S L Sbjct: 1532 NIIKQISESNSSLTDIQHAAKLPALKQLLMDCGIGLVSNNDTVISQHRALIFCQLKSMLN 1591 Query: 83 RLQKAFPQGRTLD-------------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 ++ + + + + +N + I L G GLNL G Sbjct: 1592 IIENDLFKAHMPNVSYLRLDGSVPVSQRYALVNRFNVDPSIDTLIMTTQVGGLGLNLT-G 1650 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W M + + R + G K+ V VY LI ++T++E ++ + K Sbjct: 1651 ADTVIFVEHDWSP-----MKDLQAMDRAHRIGQKKVVNVYRLITRSTLEEKIMNFQKFKL 1705 Query: 189 TIQDLLLNA 197 + ++++ Sbjct: 1706 KTANTVISS 1714 >gi|71988744|ref|NP_499301.2| hypothetical protein M03C11.8 [Caenorhabditis elegans] gi|31043816|emb|CAA88960.2| C. elegans protein M03C11.8, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|31043823|emb|CAA15960.2| C. elegans protein M03C11.8, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 989 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 67/186 (36%), Gaps = 21/186 (11%) Query: 31 KCLQLANGAVYYDEE--KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK 86 K QL + + K + L+V++ + +++ F S L L+ Sbjct: 728 KIHQLCERFRCTSKFLLNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEV 787 Query: 87 AFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 K I E+N + + + G G+NL N ++ Sbjct: 788 YLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTS-ANHIIIH 846 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ ++ R + G ++ V V L+++ T++ +L + K ++ + Sbjct: 847 DIDFNP-----YNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQVT 901 Query: 196 NALKKE 201 + +K + Sbjct: 902 DGVKGQ 907 >gi|47206539|emb|CAF92235.1| unnamed protein product [Tetraodon nigroviridis] Length = 993 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 23/245 (9%), Positives = 59/245 (24%), Gaps = 57/245 (23%) Query: 2 KQYH-KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------DEEKHWKEV 51 K Y R + + + + N + + + Sbjct: 540 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVVRTSCPPLSFHQK 599 Query: 52 HDEKIKAL-----------------------------EVIIEKANAAPIIVAYHFNSDLA 82 H + K +++ L Sbjct: 600 HTSAYHVPFQEAPVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLD 659 Query: 83 RLQKAFPQGRTLDKD----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGN 130 L+ + I +N + G G+NL + Sbjct: 660 LLEDFLEFEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ASAD 718 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + W+ + +R + G + V +Y + + +++E + Q + K + Sbjct: 719 TVIIYDSDWNP-----HNDIQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMML 773 Query: 191 QDLLL 195 L++ Sbjct: 774 THLVV 778 >gi|302653552|ref|XP_003018600.1| hypothetical protein TRV_07391 [Trichophyton verrucosum HKI 0517] gi|291182257|gb|EFE37955.1| hypothetical protein TRV_07391 [Trichophyton verrucosum HKI 0517] Length = 1518 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 66/206 (32%), Gaps = 31/206 (15%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-------------VIIE 64 + E N + ++ + Y + + V+ + + Sbjct: 943 KQSERHNLNNILMQLRKCLCHPFVYSKAIEDRGVNSTLLHRNMVEASAKLQLLELLLPKL 1002 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLL-- 112 + +++ F L ++ T K I +N Sbjct: 1003 QERGHRVLIFSQFLDFLDIVEDFLDGLGLKHLRLDGSMTSLKKQKNIDAYNAPGSEYFAF 1062 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ ++ + + ++R + G K+ V V+ L+ Sbjct: 1063 LLSTRAGGVGINL-ATADTVIILDPDFNPHQ-----DIQALSRAHRIGQKKKVMVFQLMT 1116 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 + + +E ++Q + K + +L+ + Sbjct: 1117 RGSAEEKIMQIGKKKMALDHVLIERM 1142 >gi|302423562|ref|XP_003009611.1| ISWI chromatin-remodeling complex ATPase ISW2 [Verticillium albo-atrum VaMs.102] gi|261352757|gb|EEY15185.1| ISWI chromatin-remodeling complex ATPase ISW2 [Verticillium albo-atrum VaMs.102] Length = 846 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 68/208 (32%), Gaps = 28/208 (13%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY---------DEEKHWKEVHDEKIKALE 60 + D I + ++ +AN + E K+ L+ Sbjct: 560 KRMVDAAKLEISRKKLGNPLMQLRLVANSPHNFFNPWGLENGPEIDESIVTASGKMLLLD 619 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EG 107 ++ +++ F + L L + + I +N + Sbjct: 620 RLLPALLKRGHKVLIFSQFKTQLDILHDYCTFRKLKICRIDGSVSQAERQEHIDAFNSDS 679 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G G+NL + ++ F W+ ++ + R + G + V + Sbjct: 680 DFKVFLLSTRAGGQGINLTA-ADTVILFDSDWNPQQ-----DLQAQDRVHRLGQTKPVVI 733 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + L + T+++ +L + K ++ L++ Sbjct: 734 FRLATKGTVEDSLLLSVEAKRRLEKLVI 761 >gi|257452288|ref|ZP_05617587.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_5R] Length = 1134 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 28/215 (13%) Query: 2 KQYHKFQRELY----CDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + Y ++ + + + Q+ + E + K Sbjct: 914 KFYEERRNYYYNMIHASIREKGLGKAQFFILQALNELRQITS-----CPEVKNSYISSSK 968 Query: 56 IKALEVIIEK--ANAAPIIVAYHF--------NSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + L I + N ++V ++ S R + + ++ Sbjct: 969 KEMLIEQIVEAVENDHKVLVFTNYIGSIENICKSLEEREIAYLSMTGSTKDRQQLVNKFQ 1028 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K + + G GLNL + + + WW+ + +E + R + G R Sbjct: 1029 KNEKYKVFVMTLKTGGVGLNLTA-ADTIFIYDPWWN-----KTVENQAIDRAYRLGQDRT 1082 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VF Y LI ++TI+E +LQ KS + D +++ Sbjct: 1083 VFSYKLILKDTIEEKILQLQELKSKLLDDVISEDN 1117 >gi|157118940|ref|XP_001659258.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti] gi|108875506|gb|EAT39731.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti] Length = 2625 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 7/118 (5%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 T + I E+N I L + G+NL G N +V F W+ Sbjct: 1467 YYRLDGSTTAQEREKLINEFNSNPNIHLFLVSTRAGSLGINL-VGANRVVVFDASWNP-- 1523 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G K+ FVY L+ N +++ + R K + D +++ + Sbjct: 1524 ---CHDTQAVCRVYRYGQKKPCFVYRLVVDNCLEKKIYDRQINKQGMSDRIVDECNPD 1578 >gi|18403061|ref|NP_564568.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] gi|14532630|gb|AAK64043.1| putative DNA-binding protein [Arabidopsis thaliana] gi|23296945|gb|AAN13207.1| putative DNA-binding protein [Arabidopsis thaliana] gi|332194424|gb|AEE32545.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 981 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPAS 118 I+ + L ++ + + + + N+ + ++ + Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKA 887 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E + R + G R V V + +NT+++ Sbjct: 888 GNLGLNMIAACH-VILLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVTRITIKNTVED 941 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L K + Sbjct: 942 RILALQEEKRKMVASAFGE 960 >gi|9454567|gb|AAF87890.1|AC012561_23 Similar tp transcription factors [Arabidopsis thaliana] Length = 1062 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPAS 118 I+ + L ++ + + + + N+ + ++ + Sbjct: 909 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKA 968 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E + R + G R V V + +NT+++ Sbjct: 969 GNLGLNMIAACH-VILLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVTRITIKNTVED 1022 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L K + Sbjct: 1023 RILALQEEKRKMVASAFGE 1041 >gi|328777395|ref|XP_003249333.1| PREDICTED: TATA-binding protein-associated factor 172-like [Apis mellifera] Length = 1870 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 74/264 (28%), Gaps = 76/264 (28%) Query: 3 QYHKFQ-RELYCDLQ-------GENIEAFNSASKTVKCLQLANGAVYYDEEKHW------ 48 Y F+ R L G + + + N ++H Sbjct: 1535 LYEDFRTRHSAALLSSTSCSSTGNDSHGGHVFEALRYLRNVCNHPKLVLNQRHPLYTTVC 1594 Query: 49 -----------KEVHDEKIKALEVIIEKA------------------------------- 66 + H K+ AL+ ++ Sbjct: 1595 NTLKQQKSTLAEIEHGAKLPALKQLLLDCGIGQPQQQQSRNSVSAGGTPDNQPPQQQQLV 1654 Query: 67 NAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + ++ + L + + +N + I +L Sbjct: 1655 SQHRALIFCQLKAMLDIVEKDLLRIHLPTVTYLRLDGSVPAAQRHSVVARFNADPSIDVL 1714 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G GLNL G + ++F W+ M + + R + G K+ V VY LI Sbjct: 1715 LLTTQVGGLGLNLT-GADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLIT 1768 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 ++T++E ++ + K + +++ Sbjct: 1769 RSTVEEKIMGLQKFKLLTANTVIS 1792 >gi|320164200|gb|EFW41099.1| chromodomain helicase DNA binding protein 2 [Capsaspora owczarzaki ATCC 30864] Length = 1939 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 59/160 (36%), Gaps = 20/160 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDK---------DPCT 100 K+ L+ ++ + +++ L + +G + + Sbjct: 959 SGKMVLLDKLLVRLRETGHRVLIFSQMVRMLDILAEYMQRRGFGFQRLDGNVRGDLRKQS 1018 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + G G+NL + ++ F W+ + + R + Sbjct: 1019 LDHFNAEGSTDFAFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAEARAHR 1072 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G K V +Y +I +N+++E +L+R + K + +++ + Sbjct: 1073 IGQKNVVNIYRIITKNSVEEDILERAKKKMILDHVVIQRM 1112 >gi|258574887|ref|XP_002541625.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237901891|gb|EEP76292.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 1041 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 18/159 (11%) Query: 51 VHDEKIKALEVIIEKANA-APIIVAYHFNSDLARLQKA----------FPQGRTLDKDPC 99 V KI+ L I+++ IV F S L +++ + G D Sbjct: 789 VSSTKIRHLLRILKREAGEFKFIVFSVFTSMLDKIEPFLKGAGIGYARYDGGMRNDLREA 848 Query: 100 TIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ N +L + GLNL + +V +W+ +E + R + Sbjct: 849 SLDRLRNSSSTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNP-----FVEEQAIDRVHR 902 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY + ++T++ +L K + + Sbjct: 903 LNQTVDVKVYKMTIRDTVEARILDLQERKRELASATIEG 941 >gi|146419519|ref|XP_001485721.1| hypothetical protein PGUG_01392 [Meyerozyma guilliermondii ATCC 6260] Length = 888 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 37/207 (17%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKE----------------VHDEKIKALEVIIE 64 ++ N E +E K+ L ++ Sbjct: 549 SRGGILGLITLFKKICNSPSLLAPEGKVEESELLGLDFGLNVELNNKTSGKLLVLIPLLL 608 Query: 65 KAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN---EGKI 109 + +++ ++ L L+++ + + + ++N Sbjct: 609 EIQRLGEKVVLVSNYTQTLKLLEQSVNKLNMKSLRLDGTTANKERDKLVNQFNKLSAEST 668 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GLNL G + L+ F W+ ++ + R + G KR VF+Y Sbjct: 669 MIFLLSAKAGGVGLNL-VGASRLILFDNDWNPS-----VDLQAMARIHRDGQKRPVFIYR 722 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+ IDE + QR K+ + D L+ Sbjct: 723 LLTTGCIDEKIFQRQLMKNNLSDKFLD 749 >gi|323450080|gb|EGB05963.1| hypothetical protein AURANDRAFT_1051 [Aureococcus anophagefferens] Length = 531 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 69/214 (32%), Gaps = 36/214 (16%) Query: 8 QRELYCDLQGENI-------EAFNSASKTVKCLQLANGAVYYDEEK------HWKEVHDE 54 QR L GE + + + + ++ + D+ E Sbjct: 285 QRRAIAALLGEKRLQHALAGKQADVLAYIGRYKKICDHPSLDDDAGCDARARFSSERKSG 344 Query: 55 KIKALEVIIEKANAA----PIIVAYHFNSDLAR---------LQKAFPQGRTLDKDPCTI 101 K+ L ++ + ++V + S L G+T K + Sbjct: 345 KLHVLYRLLRELRGNGGQERVVVVANQTSSLELVSRLCSREGWPWCMLDGKTPLKQRKLL 404 Query: 102 -QEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 E+N+ + G GLNL GG+ LV F W+ ++ R Sbjct: 405 NDEFNDPACEHHFCFLLSSTAGGCGLNL-IGGSRLVLFDSSWNPAT-----DKQAAARCW 458 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G R + Y L+ TI+E + QR K + Sbjct: 459 RDGNPRRCYTYRLLTAGTIEEKIYQRQLAKEGLA 492 >gi|256269512|gb|EEU04799.1| Swr1p [Saccharomyces cerevisiae JAY291] gi|259145571|emb|CAY78835.1| Swr1p [Saccharomyces cerevisiae EC1118] Length = 1514 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA-RLQKAF 88 QL +K + K++ L +++++ N ++ L Q Sbjct: 1224 LHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLN 1283 Query: 89 PQGRTLDK---------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 G + + +N + +I + S G G+NL G + ++F+ Sbjct: 1284 YHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLT-GADTVIFYDSD 1342 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ +++ R + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1343 WNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQE 1396 >gi|307105234|gb|EFN53484.1| hypothetical protein CHLNCDRAFT_136777 [Chlorella variabilis] Length = 1320 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 43/116 (37%), Gaps = 7/116 (6%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + ++N + + + G GLNL N +V F W+ Sbjct: 898 YDYIMLDGSVPQAERQTLCDKFNTQPSTFIFLISTLAGGVGLNLTA-ANKVVIFDPSWNP 956 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ R + G KR V VY LIA T++E++ R K +++L Sbjct: 957 A-----MDLQAQDRAFRIGQKRDVSVYRLIAAGTMEEIIYDRQLYKQMHSEIVLEG 1007 >gi|300709133|ref|XP_002996734.1| hypothetical protein NCER_100152 [Nosema ceranae BRL01] gi|239606056|gb|EEQ83063.1| hypothetical protein NCER_100152 [Nosema ceranae BRL01] Length = 1243 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 70/197 (35%), Gaps = 22/197 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA----APIIVAYH 76 N + L N A + K EV K+K LE II I++ + Sbjct: 1040 SIQNKCDGLKRTRDLLNAASHILYFKTSSEV-SCKMKGLEDIINLYGGEDIKNKILIFFQ 1098 Query: 77 FNSDL-----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 + + + K ++N G IP+LF G GLNL Sbjct: 1099 YKTTIDFVLQDFKKKYNLKYLRLDGSVPASKRAKIALDFNTGNIPILFLTTHIGGLGLNL 1158 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 G + ++F+ W+ + + R + G K V V+ LI +++I+E V+ Sbjct: 1159 T-GADTVIFYEHDWNP-----FNDLQAMDRAHRIGQKNTVNVFRLITKDSIEEKVMDLQS 1212 Query: 186 TKSTIQDLLLNALKKET 202 K I ++ + Sbjct: 1213 FKVFIASSVVTQQNADI 1229 >gi|222637545|gb|EEE67677.1| hypothetical protein OsJ_25316 [Oryza sativa Japonica Group] Length = 641 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 23/165 (13%) Query: 53 DEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 K++AL ++ + + ++ F L L+ T K Sbjct: 464 SSKVQALLKLLRRSQSEDPLSKSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRS 523 Query: 99 CTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+++ +L A + G G+NL + + F WW+ +E + R Sbjct: 524 EVIRQFGCVGPDSPTVLLASLKAAGAGVNLTA-ASTVYLFDPWWNPG-----VEEQAMDR 577 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V V LI +++I+E +L+ K + K Sbjct: 578 VHRIGQTKEVKVVRLIVKDSIEERMLELQERKKKLISGAFGRKKG 622 >gi|297806511|ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297316976|gb|EFH47398.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 861 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 22/151 (14%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIP--- 110 +++ +V F L L+ TL K I E+ ++ Sbjct: 701 QESPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTLKKRTQVIGEFGNPELTGPV 760 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + G G+NL + + WW+ +Q ++RI + G K+ V + + Sbjct: 761 VLLASLKASGAGINLTA-ASRVYLLDPWWNPAVEEQAMDRI-----HRIGQKQEVKMIRM 814 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 IA+++I+E VL+ + K + + A K+ Sbjct: 815 IARDSIEERVLELQQKKKNLAN---EAFKRR 842 >gi|58262478|ref|XP_568649.1| DNA dependent ATPase [Cryptococcus neoformans var. neoformans JEC21] gi|57230823|gb|AAW47132.1| DNA dependent ATPase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1036 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%) Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I + + ++ + G GLNL N +V F W+ + + + Sbjct: 686 ERQEMIDRFQDLERDHFIMLISTRAGGVGLNLTA-ANKVVIFDPSWNPAD-----DLQAM 739 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G KR V VY LI Q TI+EL+ +R K L Sbjct: 740 DRAFRIGQKRTVEVYRLIGQGTIEELIYERQVQKQQSARQL 780 >gi|240280484|gb|EER43988.1| RING-13 protein [Ajellomyces capsulatus H143] Length = 1188 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 71/219 (32%), Gaps = 39/219 (17%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +R+ L+ + + + ++ L V KI+ I+ Sbjct: 971 KAVERKSLPQLKKNAARSAEAKREYMRYL-------------TDNWVTSAKIEKTMEILR 1017 Query: 65 KANAA---------PIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEW 104 + IV F S L + + ++ ++ Sbjct: 1018 DIQSRIPEGDDKPEKTIVFSQFTSLLDLLQVPIEREGWGYCRYDGSMQPSHRNEAVLRFS 1077 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ + GLNL + ++ +W+ +Q I+R + G R Sbjct: 1078 DSQNHTIMLISLKAGNSGLNLVA-ASQVIILDPFWNPYLEEQAIDR-----AHRIGQMRP 1131 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V V+ ++ T+++ +L+ K + + L+ ++I Sbjct: 1132 VMVHRILVHKTVEDRILELQDRKRALIEGALDETASKSI 1170 Score = 41.7 bits (96), Expect = 0.067, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 15/65 (23%), Gaps = 6/65 (9%) Query: 3 QYHKFQRELYC----DLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + L I N ++ Q D+ KI Sbjct: 786 LYEGLESKTQIRFNRYLDEGTIGRNYSNILVLLLRLRQACCHPHLIDDLGVEANAATAKI 845 Query: 57 KALEV 61 +E Sbjct: 846 DLIEN 850 >gi|302786786|ref|XP_002975164.1| hypothetical protein SELMODRAFT_102612 [Selaginella moellendorffii] gi|300157323|gb|EFJ23949.1| hypothetical protein SELMODRAFT_102612 [Selaginella moellendorffii] Length = 492 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 67/228 (29%), Gaps = 36/228 (15%) Query: 4 YHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKH-------------W 48 Y DL N + ++ +L N D + Sbjct: 221 YRALYENRISDLIKGTQPSNMPNLRNMAMELRKLCNHPFLCDGLEEDFASKHANASSVSN 280 Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L ++ + +++ F L L+ + Sbjct: 281 LVQSSGKMVLLNKLLPMLRDSNRRVLIFSQFTIMLDILEDYLSSEGYTFERIDGKIRGSE 340 Query: 98 --PCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I + N+ K + G G+ L + + + W+ + + + Sbjct: 341 RQQAAIDRYSANDCKTFAFLLSTRAGGLGITLTA-ADTCIIYDSDWNPQN-----DLQAM 394 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V +Y LI +NT ++ + + K + + +L ++ Sbjct: 395 ARCHRIGQTKDVRIYRLITRNTYEQHLFECSSRKYGLDEAVLGRFAED 442 >gi|195031145|ref|XP_001988297.1| GH10643 [Drosophila grimshawi] gi|193904297|gb|EDW03164.1| GH10643 [Drosophila grimshawi] Length = 1931 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 27/225 (12%), Positives = 67/225 (29%), Gaps = 34/225 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 KQY+K + +G+ + ++ + N A + Sbjct: 796 KQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALIRPSEFELFGLQQDEALQ 855 Query: 52 ------HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 + + K +++ L L + + Sbjct: 856 TLLKGSGKLVLLDKLLCKLKDTGHRVLIFSQMVRMLDVLADYLQKRHFSFQRLDGSIKGE 915 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + G G+NL + ++ F W+ + + Sbjct: 916 MRRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQ 969 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 970 ARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 1014 >gi|207346437|gb|EDZ72930.1| YDR334Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1514 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA-RLQKAF 88 QL +K + K++ L +++++ N ++ L Q Sbjct: 1224 LHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLN 1283 Query: 89 PQGRTLDK---------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 G + + +N + +I + S G G+NL G + ++F+ Sbjct: 1284 YHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLT-GADTVIFYDSD 1342 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ +++ R + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1343 WNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQE 1396 >gi|39978259|ref|XP_370517.1| hypothetical protein MGG_07014 [Magnaporthe oryzae 70-15] gi|145013403|gb|EDJ98044.1| hypothetical protein MGG_07014 [Magnaporthe oryzae 70-15] Length = 986 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 65/199 (32%), Gaps = 30/199 (15%) Query: 14 DLQGENIEAFNSASK----TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 DL+ IE +K + E + + +L+ + ++ Sbjct: 783 DLEQPEIEQDQEMTKKNSIINRIR---------MENWTSSTKMEMLVHSLQKLRSDNSSH 833 Query: 70 PIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPAS 118 I+ F L ++ T + +I + N + + Sbjct: 834 KSIIFSQFTGMLQLIEWRLRRAGITTVMLDGSMTPAQRAASIDHFMNNVDVECFLVSLKA 893 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + L +++I+ Sbjct: 894 GGVALNLTE-ASRVFIVDPWWNPAAEWQSADRV-----HRIGQTRPVVITRLCIEDSIES 947 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +++ K+ + + +N+ Sbjct: 948 RIVELQEKKTKMINSTVNS 966 >gi|195144322|ref|XP_002013145.1| GL23967 [Drosophila persimilis] gi|194102088|gb|EDW24131.1| GL23967 [Drosophila persimilis] Length = 1060 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 22/160 (13%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 K+ + I++ K N I+ + S L L+ + Sbjct: 887 PSTKMLKVMEILKSSILKDNNDKAIIVSQWTSVLEILRDHLENDKLSTLSLNGSIPVKNR 946 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N+ +L + G GLNL G N L+ L W+ + E R Sbjct: 947 QEIVNQFNDQHNQKRILLLSLTAGGVGLNL-VGANHLLLLDLHWNPQL-----EAQAQDR 1000 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V +Y + +T+++ +L + K + + +L Sbjct: 1001 IYRVGQKKDVMIYKFVCLDTVEQRILALQQHKLELANGVL 1040 Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 4/51 (7%), Positives = 14/51 (27%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 Y ++ + +++ ++ Q+ D +E Sbjct: 758 YKLHEKFAKMAGNKKEVKSHEILVLLLRLRQICCHPGLIDSMLEGEEAKSM 808 >gi|212546587|ref|XP_002153447.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210064967|gb|EEA19062.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1084 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 60/165 (36%), Gaps = 19/165 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + ++ K+ L ++ K N ++ F + Sbjct: 901 KNQEWMNSGKVDKLCELLKKFKENGDRTLIFSQFTLVMDILEYVLETINMRFFRLDGRTN 960 Query: 94 LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + + + +IP+ + G G+NL N ++ F ++ + + Sbjct: 961 VEDRQSILDAFYEQTEIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDVQA 1014 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V V L+ + TI+E + +TK T+ ++ Sbjct: 1015 ENRAHRVGQTREVEVIRLVTKGTIEEQIYALGQTKLTLDQRVVGD 1059 >gi|190345850|gb|EDK37807.2| hypothetical protein PGUG_01905 [Meyerozyma guilliermondii ATCC 6260] Length = 761 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 71/189 (37%), Gaps = 29/189 (15%) Query: 31 KCLQLANGAVYYDEEKHWKE-----------VHDEKIKALEVIIEKA-NAAPIIVAYHFN 78 + + N + E + + KI+ L+ +I + +++ F Sbjct: 475 QLRSICNSPYTFYEPFPLNDSKTSIFMEVFYKNSAKIQVLDQLINELLPDHKLLIFSQFT 534 Query: 79 SDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 L L + + I ++N + + + G G+NL Sbjct: 535 KMLDLLHDWLDFKNIGFCRLDGSTSHEDRDTQIDQFNTDKSKKVFLLSTRAGGLGINLTA 594 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + +V F W+ + ++ + R + G K+ V +Y + +N+++E+++ + +K Sbjct: 595 -ADTVVIFDNDWNPQ-----VDLQAIDRVHRIGQKKPVKIYRFLIKNSVEEILISKSYSK 648 Query: 188 STIQDLLLN 196 ++ L++ Sbjct: 649 RFLEKLVIQ 657 >gi|289613152|emb|CBI59746.1| unnamed protein product [Sordaria macrospora] Length = 1171 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 17/157 (10%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + KI + + ++V H L LQ F + ++ Sbjct: 585 DPEFCGKWKILRKLLRFWHESGDKVLVFSHSVRLLRILQHLFHNTSYNVSFLDGALSYEE 644 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + E+N + + + + G GLN+ N +V F W+ + R Sbjct: 645 RQRVVDEFNTDPRQFVFLISTKAGGVGLNITS-ANKVVIFDPHWNPS-----YDLQAQDR 698 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G R V V+ L++ TI+E+V R K + Sbjct: 699 AYRIGQIRDVDVFRLVSAGTIEEIVYARQIYKQQQAN 735 >gi|154275942|ref|XP_001538816.1| DNA repair protein RAD16 [Ajellomyces capsulatus NAm1] gi|150413889|gb|EDN09254.1| DNA repair protein RAD16 [Ajellomyces capsulatus NAm1] Length = 927 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 50/147 (34%), Gaps = 17/147 (11%) Query: 69 APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 IV F S L ++ T + +I+ + N + + Sbjct: 773 HKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQRQKSIEHFMNNVDVEVFLVSLK 832 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G +R + L +++++ Sbjct: 833 AGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVE 886 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ K+ + +N + E + Sbjct: 887 SRMVLLQEKKANMIRGTINKDQSEALE 913 >gi|323349205|gb|EGA83435.1| Swr1p [Saccharomyces cerevisiae Lalvin QA23] Length = 1469 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 69/179 (38%), Gaps = 19/179 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA-RLQKAF 88 QL +K + K++ L +++++ N ++ L Q Sbjct: 1179 LHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLN 1238 Query: 89 PQGRTLDK---------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 G + + +N + +I + S G G+NL G + ++F+ Sbjct: 1239 YHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLT-GADTVIFYDSD 1297 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ +++ R + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1298 WNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQE 1351 >gi|317058831|ref|ZP_07923316.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_5R] gi|313684507|gb|EFS21342.1| SWF/SNF family helicase [Fusobacterium sp. 3_1_5R] Length = 1009 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 28/215 (13%) Query: 2 KQYHKFQRELY----CDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + Y ++ + + + Q+ + E + K Sbjct: 789 KFYEERRNYYYNMIHASIREKGLGKAQFFILQALNELRQITS-----CPEVKNSYISSSK 843 Query: 56 IKALEVIIEK--ANAAPIIVAYHF--------NSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + L I + N ++V ++ S R + + ++ Sbjct: 844 KEMLIEQIVEAVENDHKVLVFTNYIGSIENICKSLEEREIAYLSMTGSTKDRQQLVNKFQ 903 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K + + G GLNL + + + WW+ + +E + R + G R Sbjct: 904 KNEKYKVFVMTLKTGGVGLNLTA-ADTIFIYDPWWN-----KTVENQAIDRAYRLGQDRT 957 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VF Y LI ++TI+E +LQ KS + D +++ Sbjct: 958 VFSYKLILKDTIEEKILQLQELKSKLLDDVISEDN 992 >gi|302504244|ref|XP_003014081.1| hypothetical protein ARB_07801 [Arthroderma benhamiae CBS 112371] gi|291177648|gb|EFE33441.1| hypothetical protein ARB_07801 [Arthroderma benhamiae CBS 112371] Length = 1518 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 66/206 (32%), Gaps = 31/206 (15%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-------------VIIE 64 + E N + ++ + Y + + V+ + + Sbjct: 943 KQSERHNLNNILMQLRKCLCHPFVYSKAIEDRGVNSTLLHRNMVEASAKLQLLELLLPKL 1002 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLL-- 112 + +++ F L ++ T K I +N Sbjct: 1003 QERGHRVLIFSQFLDFLDIVEDFLDGLGLKHLRLDGSMTSLKKQKNIDAYNAPGSEYFAF 1062 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ ++ + + ++R + G K+ V V+ L+ Sbjct: 1063 LLSTRAGGVGINL-ATADTVIILDPDFNPHQ-----DIQALSRAHRIGQKKKVMVFQLMT 1116 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 + + +E ++Q + K + +L+ + Sbjct: 1117 RGSAEEKIMQIGKKKMALDHVLIERM 1142 >gi|295661001|ref|XP_002791056.1| chromodomain-helicase-DNA-binding protein [Paracoccidioides brasiliensis Pb01] gi|226280983|gb|EEH36549.1| chromodomain-helicase-DNA-binding protein [Paracoccidioides brasiliensis Pb01] Length = 1481 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 76/209 (36%), Gaps = 31/209 (14%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEKA 66 + E N + ++ + Y + + V+ K++ LE+++ K Sbjct: 947 KQTERHNLNNILMQLRKCLCHPFVYSKAIEERTVNAALSHRNLVEASSKLQLLEMLVPKL 1006 Query: 67 N--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL-- 112 +++ F +L ++ L + I ++N P Sbjct: 1007 QERGHRVLIFSQFLDNLDVIEDFLDGLGLLHRRLDGSMTSLQKQKQIDDYNAPDSPYFAF 1066 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G G+NL + ++ ++ + + ++R + G ++ V V+ L+ Sbjct: 1067 LLSTRSGGVGINL-ATADTVIIMDPDFNPHQ-----DIQALSRAHRIGQQKKVLVFQLVT 1120 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + +E ++Q + K + +L+ + E Sbjct: 1121 KASAEEKIMQIGKKKLALDQVLIEHMDAE 1149 >gi|281211860|gb|EFA86022.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1897 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 74/245 (30%), Gaps = 59/245 (24%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---VHDEKIKALEVIIEK 65 +E + + +L + + + H + + + K ++ + Sbjct: 1583 QETKKSTKKGGQATTHVFQALQYLRKLCSHPQFVLNQNHPQYNAIIKELKASKSDITDIE 1642 Query: 66 AN------------------------------------AAPIIVAYHFNSDLARLQKAFP 89 + +++ S L ++ Sbjct: 1643 HSPKLTTLKELLLECGIGVQSANANSNNNADLSQDVTTQHRVLIFAQMKSMLDVVETDLL 1702 Query: 90 QGRT-------------LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + K + ++N + I LL G GLNL G + ++F Sbjct: 1703 KHHMPSVTYLRMDGSTDPMKRHSIVNQFNSDPSIDLLLLTTHVGGLGLNLT-GADTVIFL 1761 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ M + + R + G K+ V VY LI T++E ++ R K I + ++ Sbjct: 1762 EHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITAGTLEEKIMGLQRFKLNIANTIV 1816 Query: 196 NALKK 200 N + Sbjct: 1817 NQENQ 1821 >gi|257465912|ref|ZP_05630223.1| SWF/SNF family helicase [Fusobacterium gonidiaformans ATCC 25563] Length = 1134 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 28/215 (13%) Query: 2 KQYHKFQRELY----CDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + Y ++ + + + Q+ + E + K Sbjct: 914 KFYEERRNYYYNMIHASIREKGLGKAQFFILQALNELRQITS-----CPEVKNSYISSSK 968 Query: 56 IKALEVIIEK--ANAAPIIVAYHF--------NSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + L I + N ++V ++ S R + + ++ Sbjct: 969 KEMLIEQIVEAVENDHKVLVFTNYIGSIENICKSLEEREIAYLSMTGSTKDRQQLVNKFQ 1028 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K + + G GLNL + + + WW+ + +E + R + G R Sbjct: 1029 KNEKYKVFVMTLKTGGVGLNLTA-ADTIFIYDPWWN-----KTVENQAIDRAYRLGQDRT 1082 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VF Y LI ++TI+E +LQ KS + D +++ Sbjct: 1083 VFSYKLILKDTIEEKILQLQELKSKLLDDVISEDN 1117 >gi|256075325|ref|XP_002573970.1| excision repair helicase ercc-6-related [Schistosoma mansoni] gi|238659162|emb|CAZ30203.1| excision repair helicase ercc-6-related [Schistosoma mansoni] Length = 1323 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 34/256 (13%), Positives = 69/256 (26%), Gaps = 65/256 (25%) Query: 2 KQYHK-FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY------------------- 41 K Y + + ++ DL F S L N Sbjct: 468 KLYREYLESQVCKDLLNGKGNIFPSLIL---LRNLCNHPDLATGGPRDSCFLNEEFESDK 524 Query: 42 ---------YDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQK---- 86 Y + K+ + ++ +++ L L++ Sbjct: 525 QGIENVCLSYSWSRFGCPRRSSKMLVVASLLKNWYDQGHKVLLFSQSRRMLTLLERLVQL 584 Query: 87 ------AFPQGRTLDKDPCTIQEWN---------------EGKIPLLFAHPASCGHGLNL 125 + + I+ +N I L G G+NL Sbjct: 585 MKFSYLRMDGTTPVSQRHELIRRFNYRSTSDSEKIDRTSDHLDIFLFLLTTRVGGLGVNL 644 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N ++ + W+ + R + G R V +Y L+ TI+E + R Sbjct: 645 TS-ANRVLIYDPDWNPTT-----DLQARERAWRIGQSRDVVIYRLLTSGTIEEKIYHRQI 698 Query: 186 TKSTIQDLLLNALKKE 201 K + + +L +++ Sbjct: 699 FKQFLTNRILKNPRQQ 714 >gi|146088639|ref|XP_001466107.1| DNA repair protein [Leishmania infantum JPCM5] gi|134070209|emb|CAM68545.1| putative DNA repair protein [Leishmania infantum JPCM5] Length = 1092 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAF----------P 89 + K +H K+ A+ IEK ++V F S L Q Sbjct: 911 IFARLDPQKPLHGTKLDAIANYIEKVPKDEKVVVFSQFGSMLDLTQYWLQRRSIRAVKLC 970 Query: 90 QGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 TL + +Q + ++ + ++ + G GLNLQ N +V WW+ Sbjct: 971 GSLTLTQRQSVLQAFLHDQNVRVILISLKAGGEGLNLQ-VANHVVLTDPWWNPAVEM--- 1026 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V R + G R V + +++++E ++ K + + ++ Sbjct: 1027 --QAVQRAHRIGQTRPVHAVRFVTEHSVEERMVDLQDKKMLVFEGTIDG 1073 >gi|167519292|ref|XP_001743986.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777948|gb|EDQ91564.1| predicted protein [Monosiga brevicollis MX1] Length = 1542 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 8/103 (7%) Query: 96 KDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N + L + GLN+ YGGN ++ F + W+ + + Sbjct: 1077 RRKDMCDQFNQPDEPCRLFLVSIRAGATGLNM-YGGNRVILFDVSWNPAT-----DNQAI 1130 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +R + G ++ V+VY L+A TI+E +L R K TI +++ Sbjct: 1131 SRCHRYGQQKTVYVYRLVAAGTIEEHILSRQINKMTIFQNVID 1173 >gi|292495070|sp|P38086|RDH54_YEAST RecName: Full=DNA repair and recombination protein RDH54; AltName: Full=RAD homolog 54; AltName: Full=Recombination factor TID1; AltName: Full=Two hybrid interaction with DMC1 protein 1; Includes: RecName: Full=DNA topoisomerase; Includes: RecName: Full=Putative helicase gi|433837|emb|CAA53930.1| unnamed protein product [Saccharomyces cerevisiae] gi|536326|emb|CAA85017.1| RDH54 [Saccharomyces cerevisiae] Length = 958 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 34/213 (15%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------------VHDEKIKA 58 L + +S ++ N + ++K ++ K+K Sbjct: 609 ARLDFGQLTFSSSLGLITLLKKVCNSPGLVGSDPYYKSHIKDTQSQDSYSRSLNSGKLKV 668 Query: 59 LEVII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L ++ K ++V ++ L ++ + + +N Sbjct: 669 LMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFN 728 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I S G GLNL G + L+ F W+ ++ ++R + G K+ Sbjct: 729 RNPAIFGFLLSAKSGGVGLNL-VGRSRLILFDNDWNPS-----VDLQAMSRIHRDGQKKP 782 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 F+Y L+ IDE +LQR K+++ L Sbjct: 783 CFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 815 >gi|320038964|gb|EFW20899.1| DNA repair and recombination protein RAD26 [Coccidioides posadasii str. Silveira] Length = 961 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 71/215 (33%), Gaps = 45/215 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE-----------------------KHWKEVHDEKIK 57 + ++ +L N + +H+ KI+ Sbjct: 588 NSESALQLITILKKLCNSPSLLTLKVLKDENPNCTISSLISTLPPNLLRHFSPASSGKIR 647 Query: 58 ALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 L+ ++ ++ I++ ++ S L L K + ++ Sbjct: 648 VLDQLLHNLHSTTSEKIVLVSNYTSTLNLLAALLSSLSLPYLRLDGSTPASKRQFLVDDF 707 Query: 105 N---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N + G GLNL G + LV F + W+ + + R + G Sbjct: 708 NRSSSKSCFAFLLSAKAGGIGLNLT-GASRLVLFDVDWNPAT-----DIQAMARIHRDGQ 761 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR +Y ++ + ++E + QR TK + D +++ Sbjct: 762 KRHCHIYRMLLRGGLEEKIWQRQVTKLGLSDSVMD 796 >gi|242046730|ref|XP_002461111.1| hypothetical protein SORBIDRAFT_02g040960 [Sorghum bicolor] gi|241924488|gb|EER97632.1| hypothetical protein SORBIDRAFT_02g040960 [Sorghum bicolor] Length = 822 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 60/161 (37%), Gaps = 23/161 (14%) Query: 53 DEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 K++AL ++ + + +V F L L+ + + K Sbjct: 646 SSKVQALLKLLKASQNEDPLSKSVVFSQFKQMLILLESPLRKAGFKTLRLDGSMSAKKRL 705 Query: 99 CTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 IQE+ G +L A + G G+NL + + F WW+ +E + R Sbjct: 706 QVIQEFTHGGPDSPTVLLASLKAAGAGVNLTA-ASTVYLFDPWWNPG-----VEEQAMDR 759 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V V LI +++I+E +L K + Sbjct: 760 VHRIGQKKEVKVIRLIVKDSIEERILTLQERKKRLISSAFG 800 >gi|115460732|ref|NP_001053966.1| Os04g0629300 [Oryza sativa Japonica Group] gi|39546244|emb|CAE04253.3| OSJNBa0089N06.14 [Oryza sativa Japonica Group] gi|113565537|dbj|BAF15880.1| Os04g0629300 [Oryza sativa Japonica Group] gi|125549851|gb|EAY95673.1| hypothetical protein OsI_17539 [Oryza sativa Indica Group] gi|125591732|gb|EAZ32082.1| hypothetical protein OsJ_16271 [Oryza sativa Japonica Group] gi|215717116|dbj|BAG95479.1| unnamed protein product [Oryza sativa Japonica Group] Length = 1051 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 50/141 (35%), Gaps = 17/141 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 IV + L L+ + R + ++E+N + ++ ++ + Sbjct: 898 KAIVFSQWTGLLDLLELSLDSSRIKFRRLDGAMSLNLREAAVREFNTDPEVRVMLMSLKA 957 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ WW+ E V R + G R V V L ++T+++ Sbjct: 958 GNLGLNMVAACH-VIMIDPWWNP-----YAEDQAVDRAHRIGQTRPVTVSRLTIKDTVED 1011 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +L K + K Sbjct: 1012 RILALQEKKRKMVQSAFGEDK 1032 >gi|134085395|ref|NP_001076824.1| helicase ARIP4 [Xenopus (Silurana) tropicalis] gi|166217265|sp|A4IHD2|ARIP4_XENTR RecName: Full=Helicase ARIP4; AltName: Full=Androgen receptor-interacting protein 4; AltName: Full=RAD54-like protein 2 gi|134023855|gb|AAI35474.1| rad54l2 protein [Xenopus (Silurana) tropicalis] Length = 1396 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 9/121 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + I ++N+ K+ L + G+NL G N +V F W+ Sbjct: 777 YYRLDGSTSASERERLINQFNDPSNEKVWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP 835 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G ++ ++Y L++ T+++ + R TK + D +++ L E Sbjct: 836 -----CHDAQAVCRVYRYGQRKPCYIYRLVSDFTLEKKIYDRQITKQGMSDRVVDDLNPE 890 Query: 202 T 202 Sbjct: 891 V 891 >gi|90399293|emb|CAH68165.1| H0323C08.5 [Oryza sativa Indica Group] gi|116312065|emb|CAJ86429.1| H0303G06.18 [Oryza sativa Indica Group] Length = 1051 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 50/141 (35%), Gaps = 17/141 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 IV + L L+ + R + ++E+N + ++ ++ + Sbjct: 898 KAIVFSQWTGLLDLLELSLDSSRIKFRRLDGAMSLNLREAAVREFNTDPEVRVMLMSLKA 957 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ WW+ E V R + G R V V L ++T+++ Sbjct: 958 GNLGLNMVAACH-VIMIDPWWNP-----YAEDQAVDRAHRIGQTRPVTVSRLTIKDTVED 1011 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +L K + K Sbjct: 1012 RILALQEKKRKMVQSAFGEDK 1032 >gi|300121547|emb|CBK22066.2| unnamed protein product [Blastocystis hominis] Length = 787 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 72/240 (30%), Gaps = 45/240 (18%) Query: 2 KQYHKFQRE--LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK------------- 46 K Y + ++ + + T++ + N + Sbjct: 406 KFYRAVYDHNTSVRSVSTDSKNLPSLMNITMELRKCCNHPFLIRGAESTVIEEICAVYPF 465 Query: 47 ----------HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ---- 90 + K+ L+ ++ K A +++ + L +Q Sbjct: 466 RSSLAPELALKYITYASGKMVVLDKLLPKLRAQGHRVLLFSQMVNMLNIIQDYLSMKGYP 525 Query: 91 ------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G + I ++ + + G G+NL + ++ + W+ + Sbjct: 526 FERIDGGVKISDRQAAIDRFSTPGSDRFIFLICTRAGGVGINLTA-ADTVIIYDSDWNPQ 584 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G +AV VY LI T + + Q+ K + +LN LK+ Sbjct: 585 N-----DIQAQARCHRIGQDKAVKVYRLITNRTYEMEMFQKANMKLGLDKAVLNPLKQNI 639 >gi|193786196|dbj|BAG51479.1| unnamed protein product [Homo sapiens] Length = 737 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 130 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 189 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 190 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 249 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 250 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 305 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 306 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 354 >gi|145527844|ref|XP_001449722.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124417310|emb|CAK82325.1| unnamed protein product [Paramecium tetraurelia] Length = 1127 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 60/174 (34%), Gaps = 22/174 (12%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ- 90 Q K+ L+ +++ K +++ L L++ Sbjct: 869 QAC---FILPNSPDSLIASSSKLLQLDRLLKDLKQKQWRVLIFCQMTRMLDILEEYMLHK 925 Query: 91 ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + D+ + KI + G G+ L + ++F+ W+ Sbjct: 926 GYTYFRMDGQCQINDRRDMVNEFQQNDKIFAFLLSTRAGGLGITLTQ-ADAVIFYDNDWN 984 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V+VY LI + TI+E +++R + K +Q + Sbjct: 985 PT-----MDAQATDRAHRIGRTKDVYVYRLITKGTIEERIVKRAQQKQNVQSTV 1033 >gi|328353422|emb|CCA39820.1| DNA helicase [Pichia pastoris CBS 7435] Length = 1103 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 71/205 (34%), Gaps = 29/205 (14%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKANAAP 70 Q + N SK K V E + + KI AL ++ + Sbjct: 886 QENEVLCPNCRSKISKLRLFKTHLVEDSERGYSVTLFHPYGSSSKINALLRHLKTIHETK 945 Query: 71 I--IVAYHFNSDLARLQ------------KAFPQGRTLDKDPCTIQEWNE----GKIPLL 112 +V F+S L +Q F +L + ++E+N+ G I +L Sbjct: 946 EHVVVISQFSSFLDLIQAELSKYKKEFKVMKFDGQLSLSERQVVLKEFNDNPENGGINVL 1005 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + WW +E + R + G + V V I Sbjct: 1006 LLSLKAGGVGLNLTN-ASRAFMMDPWWSPS-----VEAQAIDRLHRIGQSKNVNVVRFIM 1059 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + +I+E +L+ K + + + + Sbjct: 1060 EGSIEEKMLKVQERKKQLGEAVGDD 1084 >gi|325090620|gb|EGC43930.1| DNA repair protein RAD16 [Ajellomyces capsulatus H88] Length = 848 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 50/147 (34%), Gaps = 17/147 (11%) Query: 69 APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 IV F S L ++ T + +I+ + N + + Sbjct: 694 HKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQRQKSIEHFMNNVDVEVFLVSLK 753 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G +R + L +++++ Sbjct: 754 AGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVE 807 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ K+ + +N + E + Sbjct: 808 SRMVLLQEKKANMIRGTINKDQSEALE 834 >gi|225556044|gb|EEH04334.1| DNA repair protein RAD16 [Ajellomyces capsulatus G186AR] Length = 848 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 50/147 (34%), Gaps = 17/147 (11%) Query: 69 APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 IV F S L ++ T + +I+ + N + + Sbjct: 694 HKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQRQKSIEHFMNNVDVEVFLVSLK 753 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G +R + L +++++ Sbjct: 754 AGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVE 807 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ K+ + +N + E + Sbjct: 808 SRMVLLQEKKANMIRGTINKDQSEALE 834 >gi|291239595|ref|XP_002739708.1| PREDICTED: brahma-like protein [Saccoglossus kowalevskii] Length = 1523 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 66/223 (29%), Gaps = 42/223 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDE------------ 44 Y QR G + + ++ +L N + + Sbjct: 911 LYRHMQRNGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKLCNHPFMFPQIEEAFCEHLGQT 970 Query: 45 ----EKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK- 96 + K + L+ I+ K N ++ + +G + Sbjct: 971 GGIVQGADLYRSSGKFELLDRILPKLKACNHKALLFSQMTTLMTILEDYFAHRGFRYLRL 1030 Query: 97 --------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +N P + + G GLNLQ + ++ F W+ + Sbjct: 1031 DGTTKSDDRAKLLEMFNAPGSPYNIFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ--- 1086 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + R + G K V V L+ N+++E +L R K Sbjct: 1087 --DLQAQDRAHRIGQKSEVRVLRLLTVNSVEEKILAAARYKLN 1127 >gi|71022805|ref|XP_761632.1| hypothetical protein UM05485.1 [Ustilago maydis 521] gi|74699657|sp|Q4P328|SWR1_USTMA RecName: Full=Helicase SWR1 gi|46101185|gb|EAK86418.1| hypothetical protein UM05485.1 [Ustilago maydis 521] Length = 1830 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 65/166 (39%), Gaps = 11/166 (6%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG 91 LQ G + + + K ++I + + F + Sbjct: 1527 LLQYDCGKLQQLD----ILMRRLKEGGHRILIFTQMTRVLDILESFLNYHGYRYLRLDGA 1582 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ +++N + +I S G G+NL G + ++F+ L W+ Q ++R Sbjct: 1583 TKVESRQALTEQFNRDARISAFILSTRSGGLGINLT-GADTVLFYDLDWNAAIEAQCMDR 1641 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V +Y + ++TI+E +L++ K + ++++ Sbjct: 1642 -----AHRIGQTRDVHIYRFVTEHTIEENMLRKANQKRLLDNVVIQ 1682 >gi|308483748|ref|XP_003104075.1| hypothetical protein CRE_01100 [Caenorhabditis remanei] gi|308258383|gb|EFP02336.1| hypothetical protein CRE_01100 [Caenorhabditis remanei] Length = 1083 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 20/166 (12%) Query: 53 DEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRTLD----------KDPCT 100 K+ I+ ++ + S L ++K G Sbjct: 903 SCKMHKTLEIVRDILDRKEKVVIVSQWTSVLNLVEKHIQNGGHNYTSITGQVLVKDRQER 962 Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N +G ++ + G GLNL G ++++ L W+ QQ +RI + Sbjct: 963 VDSFNQEKGGAQVMLLSLTAGGVGLNLVGGNHLIMI-DLHWNPALEQQACDRI-----YR 1016 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G K+ V ++ L+ + TI++ V+ K + +L+ ++ Sbjct: 1017 MGQKKPVHIHRLVVKGTIEQRVMDLQEKKLALAASVLDGTATRKMN 1062 >gi|47219154|emb|CAG01817.1| unnamed protein product [Tetraodon nigroviridis] Length = 1805 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 60/174 (34%), Gaps = 41/174 (23%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPC 99 K+ L+V++ K+ +++ + L++ + ++ Sbjct: 1277 SGKLHTLDVLLSRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1336 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGN-----------------------ILVFFS 136 + I + + G G+NL ++F+ Sbjct: 1337 VADFQSRTDIFVFLLSTRAGGLGINLTAADTVSGGRSSSGSARTGHVGDVVLLFQVIFYD 1396 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 W+ +++ + R + G + V VY LI Q TI+E +LQR + KS + Sbjct: 1397 SDWNPT-----VDQQAMDRAHRLGQTKQVTVYRLICQGTIEERILQRAKEKSEV 1445 >gi|268576823|ref|XP_002643391.1| C. briggsae CBR-CSB-1 protein [Caenorhabditis briggsae] gi|187026766|emb|CAP34339.1| CBR-CSB-1 protein [Caenorhabditis briggsae AF16] Length = 1015 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 68/215 (31%), Gaps = 29/215 (13%) Query: 2 KQYHKFQREL-YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEK 55 + Y +F + + NI+AF K + N Y + K E K Sbjct: 521 RIYQEFCGSIEVQQILERNIKAFGG---INKLGDICNHPGIYRKMKPGTEKFGRMHDSGK 577 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL-------------ARLQKAFPQGRTLDKDPCTIQ 102 + L + + P F L +L + I+ Sbjct: 578 VVMLFRLFRRWFKNPNNRVVLFTQRLAVVDMLAFYLDKKQIAYCTLTGNNSLPERTRIIK 637 Query: 103 EWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + E I + + G GLNL N V F W+ + + R + G Sbjct: 638 RFEEDLSIKVFLMTTRTGGLGLNL-ASANKAVIFDPDWNPQA-----DNQAKMRIYRMGQ 691 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V + L++ +I++ + K + + LLN Sbjct: 692 QHKVTIVRLVSNGSIEDRKYFKQIQKENLAEQLLN 726 >gi|240278465|gb|EER41971.1| DNA repair protein RAD16 [Ajellomyces capsulatus H143] Length = 848 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 50/147 (34%), Gaps = 17/147 (11%) Query: 69 APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 IV F S L ++ T + +I+ + N + + Sbjct: 694 HKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQRQKSIEHFMNNVDVEVFLVSLK 753 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G +R + L +++++ Sbjct: 754 AGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVE 807 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ K+ + +N + E + Sbjct: 808 SRMVLLQEKKANMIRGTINKDQSEALE 834 >gi|156375433|ref|XP_001630085.1| predicted protein [Nematostella vectensis] gi|156217099|gb|EDO38022.1| predicted protein [Nematostella vectensis] Length = 221 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 7/120 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + + +N + I +L G GLNL G + ++F Sbjct: 50 TNMPSVTYLRLDGSTPAGSRHSIVHRFNNDPSIDVLLLTTHVGGLGLNLT-GADTVIFVE 108 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY L+ + T++E ++ + K TI + +++ Sbjct: 109 HDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLVTKGTLEEKIMGLQKFKLTIANTVIS 163 >gi|67604075|ref|XP_666591.1| RIKEN cDNA A730019I05 gene [Cryptosporidium hominis TU502] gi|54657614|gb|EAL36361.1| RIKEN cDNA A730019I05 gene [Cryptosporidium hominis] Length = 2267 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 55/193 (28%), Gaps = 34/193 (17%) Query: 32 CLQLANGAVYY--------------DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAY 75 + N +E K+ + ++ K A +++ Sbjct: 1661 LRKCCNHPFQVVGVEEREVALCKTSEERYKKMIELSGKMVLMGKLLPKLKAEGHRVLIFS 1720 Query: 76 HFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGL 123 F L L++ I +N + + G G+ Sbjct: 1721 QFIQTLTLLEELVEHHGWGYERLDGSIRGTDRNAAITRFNAEDSDKFVFLLSTRAGGLGI 1780 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ F W+ + + R + G R V VY LI T + + +R Sbjct: 1781 NLTS-ADTVIIFDSDWNPQN-----DVQACARAHRIGQTRDVKVYRLITARTYEAEMFER 1834 Query: 184 LRTKSTIQDLLLN 196 K + + + Sbjct: 1835 AGRKLGLNTAVFH 1847 >gi|254578924|ref|XP_002495448.1| ZYRO0B11638p [Zygosaccharomyces rouxii] gi|238938338|emb|CAR26515.1| ZYRO0B11638p [Zygosaccharomyces rouxii] Length = 1478 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 75/222 (33%), Gaps = 38/222 (17%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------------- 50 + G F+ + + + +N +D + Sbjct: 637 LTKNYSALTAGAKGGHFSLLNIMNELKKGSNHPYLFDNAEERVLEKFGDGNRSRENILRG 696 Query: 51 --VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 + K+ L+ ++ K + +++ L L ++ Sbjct: 697 LIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSNQ 756 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +I +N + + G G+NL + ++ F W+ + + + Sbjct: 757 RRISIDHFNAPDSNDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQAMA 810 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 811 RAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 852 >gi|254570913|ref|XP_002492566.1| DNA helicase [Pichia pastoris GS115] gi|238032364|emb|CAY70387.1| DNA helicase [Pichia pastoris GS115] Length = 1103 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 71/205 (34%), Gaps = 29/205 (14%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKANAAP 70 Q + N SK K V E + + KI AL ++ + Sbjct: 886 QENEVLCPNCRSKISKLRLFKTHLVEDSERGYSVTLFHPYGSSSKINALLRHLKTIHETK 945 Query: 71 I--IVAYHFNSDLARLQ------------KAFPQGRTLDKDPCTIQEWNE----GKIPLL 112 +V F+S L +Q F +L + ++E+N+ G I +L Sbjct: 946 EHVVVISQFSSFLDLIQAELSKYKKEFKVMKFDGQLSLSERQVVLKEFNDNPENGGINVL 1005 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL + WW +E + R + G + V V I Sbjct: 1006 LLSLKAGGVGLNLTN-ASRAFMMDPWWSPS-----VEAQAIDRLHRIGQSKNVNVVRFIM 1059 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + +I+E +L+ K + + + + Sbjct: 1060 EGSIEEKMLKVQERKKQLGEAVGDD 1084 >gi|289622673|emb|CBI50942.1| unnamed protein product [Sordaria macrospora] Length = 1217 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 49/159 (30%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK------------DPC 99 KI L I+ +A IV F S L ++ K Sbjct: 981 SSKIHELIAILRREAPTHKFIVFSQFTSMLDLVEPFLRHHLPDIKHVRYDGKMPNDAREA 1040 Query: 100 TIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + + +L GLNL ++ +W+ +E + R + Sbjct: 1041 SLHSLRKDPRTRVLLCSLKCGSLGLNLTA-ATRVIIVEPFWNP-----FVEEQAIDRVHR 1094 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++ +L+ K + + Sbjct: 1095 LTQTVDVVVYKLTVRGTVEARILELQEKKRLLAQAAVEG 1133 >gi|330906609|ref|XP_003295534.1| hypothetical protein PTT_01525 [Pyrenophora teres f. teres 0-1] gi|311333094|gb|EFQ96362.1| hypothetical protein PTT_01525 [Pyrenophora teres f. teres 0-1] Length = 1027 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 22/177 (12%), Positives = 55/177 (31%), Gaps = 21/177 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 Y + KI ++ + ++ F S L ++ + + Sbjct: 842 YMRRLDKTYIPSAKINRTIELLNEIRANDPTEKTLIFSQFTSLLDLVEVPLWREGIKYQR 901 Query: 98 -----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ + GLNL + ++ +W+ Sbjct: 902 YDGSMKMDDRAEAVNLFMDNPNQNVMLVSIKAGNAGLNLWK-ASQVIILDPFWNP----- 955 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 IE V R + R V+V+ ++ +T+++ ++ K I L+ + + Sbjct: 956 FIEEQAVDRAHRMPQTREVYVHRILVPDTVEDRIVMLQDKKREIIGDALDENASKRL 1012 Score = 38.6 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 3/53 (5%), Positives = 10/53 (18%), Gaps = 7/53 (13%) Query: 3 QYHKFQRELYCDLQ-------GENIEAFNSASKTVKCLQLANGAVYYDEEKHW 48 Y + + + G + ++ Q + Sbjct: 576 IYKALEDKSQIFINKYLERGRGSTTNYASVLVVLLRLRQACCHPHLIKDLSQP 628 >gi|183979217|dbj|BAG30708.1| decrease in DNA methylation 1b [Brassica rapa] Length = 766 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 29/192 (15%) Query: 28 KTVKCLQLANGA---------VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYH 76 ++ + N Y+ K + LE ++ + ++V Sbjct: 488 LVIQLRKNCNHPDLLAGQIDGSYFYPPIEDIVGQCGKFRLLERLLVRLFAKNHRVLVFTQ 547 Query: 77 FNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLN 124 + L + F LD+ I E+N+ + + G G+N Sbjct: 548 WTKILDIMDYYFSEKGFEVCRIDGNVKLDERRRQIDEFNDEKSSCRIFLLSTRAGGLGIN 607 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + + + W+ + ++ + R + G + V VY L +I+ VL+R Sbjct: 608 LTA-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRVLKRA 661 Query: 185 RTKSTIQDLLLN 196 +K ++ +++ Sbjct: 662 YSKLKLEHVVIG 673 >gi|125775660|ref|XP_001359021.1| GA15429 [Drosophila pseudoobscura pseudoobscura] gi|54638762|gb|EAL28164.1| GA15429 [Drosophila pseudoobscura pseudoobscura] Length = 1058 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 22/160 (13%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 K+ + I++ K N I+ + S L L+ + Sbjct: 885 PSTKMLKVMEILKSSILKDNNDKAIIVSQWTSVLEILRDHLENDKLSTLSLNGSIPVKNR 944 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N+ +L + G GLNL G N L+ L W+ + E R Sbjct: 945 QEIVNQFNDQHNQKRILLLSLTAGGVGLNL-VGANHLLLLDLHWNPQL-----EAQAQDR 998 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V +Y + +T+++ +L + K + + +L Sbjct: 999 IYRVGQKKDVMIYKFVCLDTVEQRILALQQHKLELANGVL 1038 Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 4/51 (7%), Positives = 14/51 (27%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 Y ++ + +++ ++ Q+ D +E Sbjct: 756 YKLHEKFAKMAGNKKEVKSHEILVLLLRLRQICCHPGLIDSMLEGEEAKSM 806 >gi|315917068|ref|ZP_07913308.1| SWF/SNF family helicase [Fusobacterium gonidiaformans ATCC 25563] gi|313690943|gb|EFS27778.1| SWF/SNF family helicase [Fusobacterium gonidiaformans ATCC 25563] Length = 1143 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 28/215 (13%) Query: 2 KQYHKFQRELY----CDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + Y ++ + + + Q+ + E + K Sbjct: 923 KFYEERRNYYYNMIHASIREKGLGKAQFFILQALNELRQITS-----CPEVKNSYISSSK 977 Query: 56 IKALEVIIEK--ANAAPIIVAYHF--------NSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + L I + N ++V ++ S R + + ++ Sbjct: 978 KEMLIEQIVEAVENDHKVLVFTNYIGSIENICKSLEEREIAYLSMTGSTKDRQQLVNKFQ 1037 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K + + G GLNL + + + WW+ + +E + R + G R Sbjct: 1038 KNEKYKVFVMTLKTGGVGLNLTA-ADTIFIYDPWWN-----KTVENQAIDRAYRLGQDRT 1091 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VF Y LI ++TI+E +LQ KS + D +++ Sbjct: 1092 VFSYKLILKDTIEEKILQLQELKSKLLDDVISEDN 1126 >gi|196234384|ref|ZP_03133212.1| Non-specific serine/threonine protein kinase [Chthoniobacter flavus Ellin428] gi|196221576|gb|EDY16118.1| Non-specific serine/threonine protein kinase [Chthoniobacter flavus Ellin428] Length = 897 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 18/176 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ- 90 C A+ D+ + E++ L + IIV + + L ++ Sbjct: 599 CRMAADSTFLVDKTEPGYSSKLERLGELLAALCAEPERKIIVFSEWTTMLDLIETQLKNL 658 Query: 91 ---------GRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + E+ + + + + GLNLQ + ++ L W+ Sbjct: 659 RAKFVRLDGSVPQARRKQLVAEFQDNPQCRVFL-TTNAGSTGLNLQA-ADTVINVDLPWN 716 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q I R + G KR V VY + + TI+E +L L K + +L+ Sbjct: 717 PALLEQRIAR-----AHRMGQKRKVHVYLFVTEKTIEENLLATLGAKHELAGAVLD 767 >gi|268574810|ref|XP_002642384.1| Hypothetical protein CBG18388 [Caenorhabditis briggsae] Length = 1016 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 69/186 (37%), Gaps = 21/186 (11%) Query: 31 KCLQLANGAVYYDEEKHWKEV--HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK 86 K QL + +E+ + K + L+ ++ + +++ F S L L+ Sbjct: 766 KIHQLCERFRCTSKFLLNEELALNSGKCEQLDKMLPEIQNKGDKVLIFSQFTSMLDILEV 825 Query: 87 AFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 K I E+N + + + G G+NL N ++ Sbjct: 826 YLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTKAGGLGINLTS-ANHIIIH 884 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ ++ R + G ++ V V L+++ T++ +L + K ++ + Sbjct: 885 DIDFNP-----YNDKQAEDRCHRMGQEKPVHVTRLVSKCTVEIGMLALAKKKLQLEKQVT 939 Query: 196 NALKKE 201 + +K + Sbjct: 940 DGVKGQ 945 >gi|254582288|ref|XP_002497129.1| ZYRO0D16082p [Zygosaccharomyces rouxii] gi|238940021|emb|CAR28196.1| ZYRO0D16082p [Zygosaccharomyces rouxii] Length = 810 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 73/210 (34%), Gaps = 28/210 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------HDEKIKALE 60 +LY + + + ++ Q+ + + E K++ L+ Sbjct: 508 DKLYVEHLSKEFTNIKLQNMMMQLRQVVDSTFLFYFPFIHPEDLTLEALLNSSGKLQVLQ 567 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGK 108 ++ +++ F L L+ D ++++++ Sbjct: 568 KLVLPLVEKGHKVLIFSQFIQMLDLLEDWCELNSLNALRIDGSVNNDTRKEQLEKFDKKS 627 Query: 109 IP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G G+NL + +V F W+ + ++ + R + G V Sbjct: 628 SKEQVFLLSTRAAGLGINL-AAADTVVLFDSDWNPQ-----VDLQAMDRCHRIGQTNPVI 681 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY L NT++ ++L R +K ++ L++ Sbjct: 682 VYRLCCDNTVEHVILTRATSKRRLEKLVIQ 711 >gi|315054981|ref|XP_003176865.1| chromodomain-helicase-DNA-binding protein 5 [Arthroderma gypseum CBS 118893] gi|311338711|gb|EFQ97913.1| chromodomain-helicase-DNA-binding protein 5 [Arthroderma gypseum CBS 118893] Length = 1513 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 22/195 (11%), Positives = 62/195 (31%), Gaps = 31/195 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-------------VIIEKANAAPIIVAY 75 ++ + Y + + V+ + + + +++ Sbjct: 954 LMQLRKCLCHPFVYSKAIEDRGVNSTLLHRNMVEASSKLQLLELLLPKLQERGHRVLIFS 1013 Query: 76 HFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGL 123 F L ++ T K I +N + G G+ Sbjct: 1014 QFLDFLDIVEDFLDGLGLTHLRLDGSMTSLKKQKNIDAYNAPGSEYFAFLLSTRAGGVGI 1073 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + + ++R + G K+ V V+ L+ + + +E ++Q Sbjct: 1074 NL-ATADTVIILDPDFNPHQ-----DIQALSRAHRIGQKKKVMVFQLMTRGSAEEKIMQI 1127 Query: 184 LRTKSTIQDLLLNAL 198 + K + +L+ + Sbjct: 1128 GKKKMALDHVLIERM 1142 >gi|309364522|emb|CAP24766.2| hypothetical protein CBG_03965 [Caenorhabditis briggsae AF16] Length = 1109 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 20/166 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCT 100 K+KA I+ + ++V + S L ++K + Sbjct: 937 SCKMKATLEILNEATEKNEKVVVVSQWTSVLDLIKKHVKENGIRYTSITGQVLVKDRQER 996 Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N +G ++ + G GLNL GGN L+ L W+ QQ +RI + Sbjct: 997 VDSFNQEKGGANVMLLSLTAGGVGLNL-CGGNHLIMVDLHWNPALEQQAFDRI-----YR 1050 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G K+ VF++ L+ NTI++ V + ++K + +L+ ++ Sbjct: 1051 MGQKKPVFIHRLVTNNTIEQRVAELQKSKLQLASSILDGTATRKMN 1096 >gi|66805677|ref|XP_636560.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60464943|gb|EAL63058.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1332 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 29/232 (12%), Positives = 68/232 (29%), Gaps = 45/232 (19%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK----- 55 ++ Y F +++ + + + ++ + EE + + K Sbjct: 733 IELYRTFLES--DEVKDALNKTQSPLAALTVLKKICDHPHLLREEMKMISLDEMKDLLSK 790 Query: 56 -------------------IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------ 90 + + + +++ L + Sbjct: 791 VGGSSRSINSLVNNSGKFQLLLKLLPNLHQDGHRVLMFSQSVKMLEDFEILLDHLGLTYL 850 Query: 91 -----GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + K I +N + GLNL + ++ W+ Sbjct: 851 RIDGSISSTKKRQEIIDLYNTDMSYFAFIMTIQVGALGLNLTS-ADRVLILDPSWN---- 905 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I+ V R + G K+ V VY L++ TI+E + ++ K ++ +LN Sbjct: 906 --TIDNQAVDRAYRIGQKKDVVVYRLMSCGTIEEKIYRKQVFKGSLMKTMLN 955 >gi|225468600|ref|XP_002264131.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1147 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 17/143 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + ++++N ++ ++ Sbjct: 992 GEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSL 1051 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ + ++ LWW+ E + R + G R V V L ++T+ Sbjct: 1052 KAASLGLNMVAACH-VLLLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVLRLTVKDTV 1105 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 ++ +L + K + + Sbjct: 1106 EDRILALQQKKREMVASAFGEDE 1128 >gi|50308261|ref|XP_454131.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643266|emb|CAG99218.1| KLLA0E04159p [Kluyveromyces lactis] Length = 826 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 69/194 (35%), Gaps = 28/194 (14%) Query: 28 KTVKCLQLANGAVYYDEEK--------HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF 77 ++ Q+ N + K++ L+ ++ + +++ F Sbjct: 538 MMIQLRQIVNSTYLFYFPLLEPTDLTLENLLKTSGKLQVLQKLVPELIKKKHKVLIFSQF 597 Query: 78 NSDLARLQKA----------FPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNL 125 S L ++ + I+E+++ L + G G+NL Sbjct: 598 VSMLDLIEDWSELNNFISCRIDGSMQNNSRKEQIEEFSKKGSKANLFLLSTRAAGLGINL 657 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ F W+ + ++ + R + G + V VY L NTI+ +++ R Sbjct: 658 TA-ADSVIIFDSDWNPQ-----VDLQAMDRAHRIGQTKPVIVYRLYCDNTIENVIMTRAV 711 Query: 186 TKSTIQDLLLNALK 199 K ++ L++ K Sbjct: 712 NKRKLEKLVIQMGK 725 >gi|154316345|ref|XP_001557494.1| hypothetical protein BC1G_03758 [Botryotinia fuckeliana B05.10] gi|150846544|gb|EDN21737.1| hypothetical protein BC1G_03758 [Botryotinia fuckeliana B05.10] Length = 917 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 64/215 (29%), Gaps = 45/215 (20%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV------------------------ 61 ++ N ++ + + L Sbjct: 548 LQLITMLKKVCNAPSLLVKKSDTDTPSNSNVAQLLESIPPEILKKNPVVASSKFRVLNRM 607 Query: 62 --IIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN---E 106 + K+ I++ ++ S L L K + +N Sbjct: 608 LMRLSKSTTEKIVIVSNYTSTLDLLVSHLSSLNLPFLRLDGSTPQAKRQDLVNTFNKTPA 667 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K S G G+NL G + LV F + W+ + + R + G KR V Sbjct: 668 SKYFAFLLSAKSGGAGINL-IGASRLVLFDVDWNPAT-----DLQAMARIHRDGQKRPVK 721 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +Y + +DE + QR TK + D +++ K E Sbjct: 722 IYRFLMSGGMDEKIYQRQVTKMGLADSVMDGKKNE 756 >gi|303277253|ref|XP_003057920.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226460577|gb|EEH57871.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 945 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 8/107 (7%) Query: 97 DPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N+GK + + G GLNL G N LV F W+ + + R Sbjct: 703 RGAIVNKFNDGKGGDVFLLSCKAGGVGLNL-VGANRLVLFDSDWNPAN-----DLQALAR 756 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL-LNALKKE 201 + G KR V +Y L++ T++E V QR K + D + + ++ K Sbjct: 757 VWREGQKRPVTIYRLVSTGTVEERVFQRQILKGDVADAMGMASVNKR 803 >gi|121710388|ref|XP_001272810.1| DNA excision repair protein (Rad26L), putative [Aspergillus clavatus NRRL 1] gi|119400960|gb|EAW11384.1| DNA excision repair protein (Rad26L), putative [Aspergillus clavatus NRRL 1] Length = 1011 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + + K+ + AN ++V H L LQ F + Sbjct: 609 NYANPEFCGKWKVLRKLLKWWHANGDKVLVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMS 668 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++N + K + S G GLN+ N +V W+ + Sbjct: 669 YEERTKVVDDFNSDPKQFVFLISTRSGGVGLNITS-ANKVVVVDPNWNPSH-----DLQA 722 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ LI+ TI+E+V R K + Sbjct: 723 QDRAYRIGQSRNVEVFRLISAGTIEEIVYARQIYKQQQAN 762 >gi|66357154|ref|XP_625755.1| chromodomain-helicase-DNA-binding'multidomain chromatin protein with the following architecture: chromo-bromo-chromo-SNF2 ATpase' [Cryptosporidium parvum Iowa II] gi|46226948|gb|EAK87914.1| chromodomain-helicase-DNA-binding'multidomain chromatin protein with the following architecture: chromo-bromo-chromo-SNF2 ATpase' [Cryptosporidium parvum Iowa II] Length = 2270 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 55/193 (28%), Gaps = 34/193 (17%) Query: 32 CLQLANGAVYY--------------DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAY 75 + N +E K+ + ++ K A +++ Sbjct: 1661 LRKCCNHPFQVVGVEEREVALCKTSEERYKKMIELSGKMVLMGKLLPKLKAEGHRVLIFS 1720 Query: 76 HFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGL 123 F L L++ I +N + + G G+ Sbjct: 1721 QFIQTLTLLEELVEHHGWGYERLDGSIRGTDRNAAITRFNAEDSDKFVFLLSTRAGGLGI 1780 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ F W+ + + R + G R V VY LI T + + +R Sbjct: 1781 NLTS-ADTVIIFDSDWNPQN-----DVQACARAHRIGQTRDVKVYRLITARTYEAEMFER 1834 Query: 184 LRTKSTIQDLLLN 196 K + + + Sbjct: 1835 AGRKLGLNTAVFH 1847 >gi|326531768|dbj|BAJ97888.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1270 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 17/141 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHPAS 118 IV + L L+ + + ++ ++ ++ + Sbjct: 1117 KAIVFSQWTRMLDLLEVHLQASHVTYRRLDGTMSVAAREKAVNDFKTVPEVSVMIMSLKA 1176 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E V R + G R V V L ++T+++ Sbjct: 1177 ASLGLNMVAACH-VLMLDLWWNPTT-----EDQAVDRAHRIGQTRPVTVSRLTVKDTVED 1230 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +L K + K Sbjct: 1231 RILALQEKKREMVASAFGEDK 1251 >gi|328861412|gb|EGG10515.1| hypothetical protein MELLADRAFT_47048 [Melampsora larici-populina 98AG31] Length = 676 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 70/169 (41%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ------ 90 + K+ + ++ KI+ L+ ++ K+ + I++ F LA L+K Sbjct: 464 HLNKFALKNEEWMNAGKIEKLKELVIRLKSKGSRILIFSQFTQMLAILEKVMECIGVKFL 523 Query: 91 ----GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++ + E+ N+ I + + G GLNL + +V F ++ Sbjct: 524 ILTGSTSVGDRQPLVDEFTNDESITVFLLSTKAGGLGLNLMA-ADTVVIFDQDFNP---- 578 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +R R + G KR V V + ++TI+E +LQ +TK + + Sbjct: 579 -HNDRQAEDRAYRLGQKRDVHVIKFVTKHTIEEDILQLAQTKIALDTSV 626 >gi|268565237|ref|XP_002639379.1| Hypothetical protein CBG03965 [Caenorhabditis briggsae] Length = 1094 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 20/166 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCT 100 K+KA I+ + ++V + S L ++K + Sbjct: 922 SCKMKATLEILNEATEKNEKVVVVSQWTSVLDLIKKHVKENGIRYTSITGQVLVKDRQER 981 Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N +G ++ + G GLNL GGN L+ L W+ QQ +RI + Sbjct: 982 VDSFNQEKGGANVMLLSLTAGGVGLNL-CGGNHLIMVDLHWNPALEQQAFDRI-----YR 1035 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G K+ VF++ L+ NTI++ V + ++K + +L+ ++ Sbjct: 1036 MGQKKPVFIHRLVTNNTIEQRVAELQKSKLQLASSILDGTATRKMN 1081 >gi|207341053|gb|EDZ69217.1| YOR191Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1205 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 76/216 (35%), Gaps = 23/216 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCL-QLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + + + + S+ K Q N V E ++ I+ ++ Sbjct: 984 KLYDQVINQGFTE----EDLHAEYLSEMEKQKIQQKNVYVPNFESLEPSTKIEQCIQVIQ 1039 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEW-NEGK 108 + +++ II+ F + L+ + + I E+ + + Sbjct: 1040 RVFDESATEKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPE 1099 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L + GL L N +V +W+ +E R + + V V+ Sbjct: 1100 KRILLISMKAGNSGLTLT-CANHVVIVDPFWNP-----YVEEQAQDRCYRISQTKKVQVH 1153 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L ++++++ + + + K + D ++ K + ++ Sbjct: 1154 KLFIKDSVEDRISELQKRKKEMVDSAMDPGKIKEVN 1189 >gi|224090059|ref|XP_002308925.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222854901|gb|EEE92448.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1483 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 7/124 (5%) Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNI 131 + + + T+ ++++ I + + G G+NL + Sbjct: 1192 MLMDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRNDIFVFLLSTRAGGLGINLTA-ADT 1250 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ + + R + G + V VY LI + T++E +LQR K T+Q Sbjct: 1251 VIFYESDWNPTL-----DLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKHTVQ 1305 Query: 192 DLLL 195 L++ Sbjct: 1306 QLVM 1309 >gi|219128189|ref|XP_002184301.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404102|gb|EEC44050.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 975 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 72/228 (31%), Gaps = 39/228 (17%) Query: 5 HKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYY----------DEEKHWKEVH 52 +L + G + ++ ++ E+ + Sbjct: 615 RALYHQLTARISGGSCTDGGTDALKTLTTLRKICTHPSICNDDNVKPWNRPEKGPCLKYD 674 Query: 53 ---DEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQK-----------AFPQGRTL 94 K+ L+ +++ I+V ++ S L ++ G Sbjct: 675 IALSGKMTVLDKLLQSIRENAPNDKIVVVSNYTSALTIVESLILGPRKLGFLRLDGGTES 734 Query: 95 DKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ +N + L + G GLNL G N L+ W+ + Sbjct: 735 SQRQPLVESFNRSHPEKVFCLLLSSKAGGCGLNL-VGANRLLLLDPDWNPAS-----DVQ 788 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G + ++Y L T++E++LQR K + ++ K Sbjct: 789 AMGRVYRQGQTKPCWIYRLFTTGTVEEVILQRQLQKGNLTAWTVDGGK 836 >gi|255561188|ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus communis] gi|223539284|gb|EEF40877.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus communis] Length = 788 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 74/215 (34%), Gaps = 31/215 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-----------VYYDEEKHWKEVHD 53 ++ L + N + ++ + N Y E+ ++ Sbjct: 486 KTLEKHLREKIGHGMKGKLN--NLMIQLRKNCNHPDLLESAFDGSNFYPPVEQIVEQCGK 543 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQE 103 ++ + A +++ + L + F + LD+ I+E Sbjct: 544 FRLLERLLNRLFALKHKVLIFSQWTKILDIMDYYFSEKGLEVCRIDGSVKLDERKRQIEE 603 Query: 104 WN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + + + G G+NL + + + W+ + ++ + R + G Sbjct: 604 FNNVDSNYRIFLLSTRAGGLGINLTA-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQ 657 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VY L +++ +L+R +K ++ +++ Sbjct: 658 TKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIG 692 >gi|9294624|dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana] Length = 959 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 70/234 (29%), Gaps = 58/234 (24%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE------------------------ 44 + D + + +L N + Sbjct: 460 KRALADNAKQT----KVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMF 515 Query: 45 ----------EKHWKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 + W E+ + ++ + + I++ ++ L + + Sbjct: 516 SGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERR 575 Query: 91 --------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 T+ K + N+ + G GLNL G N LV F W+ Sbjct: 576 YPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNL-IGANRLVLFDPDWN 634 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G K+ V+VY ++ TI+E V QR +K +Q ++ Sbjct: 635 PAN-----DKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 683 >gi|47229701|emb|CAG06897.1| unnamed protein product [Tetraodon nigroviridis] Length = 1219 Score = 85.2 bits (209), Expect = 6e-15, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 47/118 (39%), Gaps = 9/118 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + I ++N+ + + + G+NL G N +V F W+ Sbjct: 690 YYRLDGSTSASERERLINQFNDPENNTAWIFLLSTRAGCLGVNL-IGANRVVVFDASWNP 748 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G ++ F+Y L+ T+++ + R +K + D +++ L Sbjct: 749 -----CHDAQAVCRVYRYGQRKPCFIYRLVCDFTLEKKIYDRQVSKQGMSDRVVDDLN 801 >gi|312381992|gb|EFR27591.1| hypothetical protein AND_05624 [Anopheles darlingi] Length = 1508 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 7/122 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + I E+N + L + G+NL G N +V F W Sbjct: 215 RNISYFRLDGSTVAQEREKLINEFNSNPNVHLFLVSTRAGSLGINL-VGANRVVVFDASW 273 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + V R + G K+ FVY L+ N +++ + R K + D +++ Sbjct: 274 NP-----CHDTQAVCRVYRYGQKKPCFVYRLVMDNCLEKKIYDRQINKQGMSDRIVDECN 328 Query: 200 KE 201 + Sbjct: 329 PD 330 >gi|50557192|ref|XP_506004.1| YALI0F28831p [Yarrowia lipolytica] gi|49651874|emb|CAG78816.1| YALI0F28831p [Yarrowia lipolytica] Length = 920 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 75/205 (36%), Gaps = 21/205 (10%) Query: 5 HKFQRELYCDLQGENI-EAFNSAS--KTVKC-LQLANGAVYYDEEKHWKEVHDEKIKALE 60 + E Y D + I E S + + LQ + Y EE+ W + K A Sbjct: 697 EIMKEERYYDANRDYIREDMEVMSDFELNRLALQFPSIEKYALEEEPWMDAAKVKKLAEM 756 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKI 109 + I K N +++ F L L+ Q + + + E I Sbjct: 757 LPIMKENNDRVLIFSQFTQCLDILESVLNTLGIAFLRLDGQTPVEARQDMIDKYYEETDI 816 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G+NL N ++ F L ++ + ++ R + G R V V Sbjct: 817 TVFLLSTKAGGFGINL-ACANTVIIFDLSFNPHD-----DKQAEDRAHRVGQTRDVRVIR 870 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLL 194 L+ + T++E +L+ TK + + Sbjct: 871 LVCKGTVEEKILELNNTKLALDKSV 895 >gi|50293969|ref|XP_449396.1| hypothetical protein [Candida glabrata CBS 138] gi|74690652|sp|Q6FK48|SWR1_CANGA RecName: Full=Helicase SWR1 gi|49528710|emb|CAG62372.1| unnamed protein product [Candida glabrata] Length = 1450 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 68/194 (35%), Gaps = 13/194 (6%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + + + + A LQ G + + +I Sbjct: 1146 YEELVQ--LDNPFHQVQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDGGH----RALI 1199 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 + + F + L ++ + +N + KI + S G G Sbjct: 1200 FTQMTKVLDILEQFLNYHGYLYMRLDGATKIEDRQILTERFNSDPKITVFILSSRSGGLG 1259 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL G + ++F+ W+ +++ R + G R V +Y ++++TI+ +L+ Sbjct: 1260 INLT-GADTVIFYDSDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILK 1313 Query: 183 RLRTKSTIQDLLLN 196 + K + D+++ Sbjct: 1314 KANQKRQLDDVIIQ 1327 >gi|164656625|ref|XP_001729440.1| hypothetical protein MGL_3475 [Malassezia globosa CBS 7966] gi|159103331|gb|EDP42226.1| hypothetical protein MGL_3475 [Malassezia globosa CBS 7966] Length = 1687 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 34/240 (14%), Positives = 78/240 (32%), Gaps = 59/240 (24%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----------------HDEKIKALEV 61 + + K +LAN + + H K++AL Sbjct: 1387 KVPQQHVFQKLQYLRKLANHPSLVLDPAVPAQKKLLDQVNASRGTLAGLTHAPKLQALRQ 1446 Query: 62 IIEKA----------------------NAAPIIVAYHFNSDLARLQKAFPQ--------- 90 ++ + +++ L +++ + Sbjct: 1447 LLLDCGIGVESQNNDAALIGADTGASVSQHRVLIFCQMKQMLDVIERDLFRALMPSVTYL 1506 Query: 91 ----GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + D+ +Q +N + I +L + G GL L G + ++F W+ Sbjct: 1507 RLDGSVSSDRRHGIVQSFNADPSIDILLLTTSVGGLGLTLT-GADTVIFVEHDWNP---- 1561 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 M + + R + G K+ V VY LI ++T++ ++ + K I + ++ K ++ Sbjct: 1562 -MKDLQAMDRAHRLGQKKVVNVYRLITRDTLEANIMGLQQFKMNIANSVVTQQNKSMENM 1620 >gi|156544309|ref|XP_001607162.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 2220 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 68/232 (29%), Gaps = 43/232 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDE------------ 44 Y Q + G + V+ +L N + Sbjct: 1649 LYKHMQSKGVLLTDGSEKGKRGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCEYLGIQ 1708 Query: 45 -----EKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ------- 90 K + L+ I+ K +++ + ++ Sbjct: 1709 GSGVITGPLLYRASGKFELLDRILPKLKATGHRVLLFCQMTQLMTIMEDYLQWRGFLYLR 1768 Query: 91 ---GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + ++++N+ + G GLNLQ + ++ F W+ + Sbjct: 1769 LDGTTKAEDRGDLLKKFNDPGSEFFLFILSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ-- 1825 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K V V L+ N+++E +L R K + + ++ A Sbjct: 1826 ---DLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQA 1874 >gi|307776522|pdb|3MWY|W Chain W, Crystal Structure Of The Chromodomain-Atpase Portion Of The Yeast Chd1 Chromatin Remodeler Length = 800 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 38/222 (17%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------------- 50 + G F+ + + + +N +D + Sbjct: 491 LTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRG 550 Query: 51 --VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 + K+ L+ ++ K + +++ L L + Sbjct: 551 LIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQ 610 Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +I +N + + G G+NL + +V F W+ + + + Sbjct: 611 RRISIDHFNSPDSNDFVFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA-----DLQAMA 664 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 665 RAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 706 >gi|154305729|ref|XP_001553266.1| hypothetical protein BC1G_07679 [Botryotinia fuckeliana B05.10] gi|150853198|gb|EDN28390.1| hypothetical protein BC1G_07679 [Botryotinia fuckeliana B05.10] Length = 537 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 52/175 (29%), Gaps = 7/175 (4%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 FN S + + N + V + + F S Sbjct: 348 IFNGLSLLNRLRLICNHGILQLTSTTDHVVSQGIEVVACCSMCGDYLQEEVFGGPFPS-G 406 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + ++ NE + ++ G GL+L G+ W+ Sbjct: 407 IRYTRIDGTMPLSRRNEALGAFKNEDTVRVILVSVTCGGAGLDLTT-GSRAYLLEPHWNP 465 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 MIE + R + KR V + N+ +E +++ + K + D + Sbjct: 466 -----MIEEQALCRVHRISQKRKVTTIRYLMHNSFEEQIVELQKRKKMLADATFS 515 >gi|297847386|ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297337416|gb|EFH67833.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 980 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 46/139 (33%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPAS 118 I+ + L ++ + + + + N+ + ++ + Sbjct: 827 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKA 886 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E + R + G R V V + ++T+++ Sbjct: 887 GNLGLNMIAACH-VILLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVTRITIKDTVED 940 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L K + Sbjct: 941 RILSLQEEKRKMVASAFGE 959 >gi|146420558|ref|XP_001486234.1| hypothetical protein PGUG_01905 [Meyerozyma guilliermondii ATCC 6260] Length = 761 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 71/189 (37%), Gaps = 29/189 (15%) Query: 31 KCLQLANGAVYYDEEKHWKE-----------VHDEKIKALEVIIEKA-NAAPIIVAYHFN 78 + + N + E + + KI+ L+ +I + +++ F Sbjct: 475 QLRSICNSPYTFYEPFPLNDSKTSIFMEVFYKNSAKIQVLDQLINELLPDHKLLIFSQFT 534 Query: 79 SDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 L L + + I ++N + + + G G+NL Sbjct: 535 KMLDLLHDWLDFKNIGFCRLDGSTSHEDRDTQIDQFNTDKSKKVFLLSTRAGGLGINLTA 594 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + +V F W+ + ++ + R + G K+ V +Y + +N+++E+++ + +K Sbjct: 595 -ADTVVIFDNDWNPQ-----VDLQAIDRVHRIGQKKPVKIYRFLIKNSVEEILISKSYSK 648 Query: 188 STIQDLLLN 196 ++ L++ Sbjct: 649 RFLEKLVIQ 657 >gi|47207122|emb|CAF91371.1| unnamed protein product [Tetraodon nigroviridis] Length = 1198 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 20/166 (12%) Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 K+ ++ ++ KA +++ L L+ Q R L + I Sbjct: 9 GKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 68 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++ + + G G+NL + + F W+ + + R + Sbjct: 69 DRFSKPDSERFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-----DLQAQARCHRI 122 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G +AV VY LI +N+ + + R K + +L ++ + Sbjct: 123 GQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSL 168 >gi|134108572|ref|XP_777237.1| hypothetical protein CNBB4670 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259922|gb|EAL22590.1| hypothetical protein CNBB4670 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1399 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 21/151 (13%) Query: 62 IIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGK--- 108 IIE+ + IIV F + + D+ TI+++N Sbjct: 1229 IIEQDPSQKIIVFSQFVEYIDLCSIFLRRRNIPHAKYVGSMKQDEREDTIKDFNRPMEED 1288 Query: 109 --IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 L G GLNL N ++ L W+ E V R + G R V Sbjct: 1289 KSPRCLLMSLKCGGVGLNL-CIANHVICLDLAWNAAT-----ENQAVDRAHRIGQTREVV 1342 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ L+ +NTID+ +++ + K + D + Sbjct: 1343 VHRLVVENTIDQRLMELQQQKQALSDGAMGE 1373 >gi|168012162|ref|XP_001758771.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162689908|gb|EDQ76277.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1211 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 64/238 (26%), Gaps = 55/238 (23%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-------------------- 41 K Y F + S ++ + + Sbjct: 659 KLYRAFLNSNTAE--ETLSTGTKVLSALTVMKKICDHPMLLTKRAANDIAEGMEGYLDAE 716 Query: 42 --------------YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ 85 ++ KI L +++ A ++ L +Q Sbjct: 717 DIQAAEAMTHSLAGMVQDDEDMSATSCKIDFLMALLDNLVAEGHRTLIFAQTRKMLNIIQ 776 Query: 86 KAFPQGRTLDKDPC-----------TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + + + ++ +IPL G GL L G + +V Sbjct: 777 DEILERGWIFRRIDGTIKAADRELCVQEFQSDDEIPLFLLTSQVGGLGLTLT-GADRVVI 835 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 W+ Q ++R + G K V +Y L+ TI+E + ++ K + Sbjct: 836 VDPAWNPSTDNQSVDR-----AYRIGQKNDVVIYRLMTCGTIEEKIYRKQVFKGHLMK 888 >gi|301119013|ref|XP_002907234.1| chromatin-remodeling complex ATPase chain, putative [Phytophthora infestans T30-4] gi|262105746|gb|EEY63798.1| chromatin-remodeling complex ATPase chain, putative [Phytophthora infestans T30-4] Length = 1385 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 27/221 (12%), Positives = 75/221 (33%), Gaps = 30/221 (13%) Query: 3 QYHKFQ-RELYCDLQGENIEAFNSASKT-VKCLQLANGAVYY--------DEEKHWKEVH 52 Y R++ + G + ++ ++ + + D + Sbjct: 521 LYKSLLLRDMNTIMGGTGGVSKSALQNIVMQLRKCCGHPYLFEGQEDRTLDPLGEHVVEN 580 Query: 53 DEKI--KALEVIIEKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDPCT 100 K+ + K + +++ F + + + Sbjct: 581 CGKMVLLDKLLTKLKQRGSRVLIFTQMTRVLDIMEDFCRMRLYDYCRIDGQTSYEDRESS 640 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N+ L + G G+NL Y ++++ + W+ + + R + Sbjct: 641 IDEYNKPNSSKFLFLLSTRAGGLGINL-YTADVVILYDSDWNPQA-----DLQAQDRAHR 694 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V VY L+ ++++E +++R + K + +++ + Sbjct: 695 IGQKKEVNVYRLVTTDSVEEKIIERAQQKLKLDAMVVQQGR 735 >gi|213408989|ref|XP_002175265.1| DNA repair protein rad5 [Schizosaccharomyces japonicus yFS275] gi|212003312|gb|EEB08972.1| DNA repair protein rad5 [Schizosaccharomyces japonicus yFS275] Length = 850 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 53/138 (38%), Gaps = 17/138 (12%) Query: 70 PIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 I+ F S L L+ Q + D++ + + ++ +L Sbjct: 691 KTIIFSQFTSMLDLLEPHLRNAGIGFVRYDGQMKNKDREDALNKLRTKSEVQVLLCSLKC 750 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLNL + ++ +WW+ +Q I+R+ + G K V VY + +T++E Sbjct: 751 GALGLNLT-CASRVILLDVWWNPAVEEQAIDRV-----HRIGQKHDVDVYKITIADTVEE 804 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++ K + D + Sbjct: 805 RIVALQDKKRELADGAIG 822 >gi|70986552|ref|XP_748767.1| SWI/SNF family DNA-dependent ATPase [Aspergillus fumigatus Af293] gi|66846397|gb|EAL86729.1| SWI/SNF family DNA-dependent ATPase, putative [Aspergillus fumigatus Af293] Length = 707 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 21/164 (12%) Query: 42 YDEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLA----------RLQKA 87 Y K V+ KI+ II ++ +IV HF + L + Sbjct: 521 YGHALPRKWVNSSKIEKAAEIIKAIRDQGTGDKVIVFSHFTALLDLIEVPIARSGWKYRR 580 Query: 88 FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + I + ++ +L + GLNL + ++ W+ Sbjct: 581 YDGRMTPAERGSAISSFASQPDCLVLLVSLKAGNAGLNLT-CASNVIIMEPSWNP----- 634 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 IE + R + G +R V VY L+ +TI+ +L+ K + Sbjct: 635 YIEEQAIGRVHRIGQERHVRVYRLLVADTIEIRILELQEKKRKL 678 >gi|255930267|ref|XP_002556693.1| Pc06g00840 [Penicillium chrysogenum Wisconsin 54-1255] gi|211581306|emb|CAP79077.1| Pc06g00840 [Penicillium chrysogenum Wisconsin 54-1255] Length = 978 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 70/221 (31%), Gaps = 44/221 (19%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDE----------------------EKHWKEVH 52 Q A ++ +L+N +H Sbjct: 558 FQSAMGNAESALQLITILKKLSNSPSLLTAKNNDDTPNETMTALIASIPQPLHRHLSPSS 617 Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPC 99 KI+ L+ +++ I++ ++ S L+ K Sbjct: 618 SAKIRVLDQLLDTMRSKTDEKIVLVSNYTSTLSLLATLLTSLGLPYLRLDGSTPAQKRQG 677 Query: 100 TIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N + G GLNL G + L+ F + W+ + + R Sbjct: 678 LVDDFNRLPASSCFAFLLSAKAGGTGLNL-IGASRLILFDVDWNPAT-----DIQAMARI 731 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR +Y ++ + +++E + QR TK + D ++ Sbjct: 732 HRDGQKRPCRIYRILLKGSLEEKIWQRQVTKLGLADSVMQE 772 >gi|194756856|ref|XP_001960686.1| GF13478 [Drosophila ananassae] gi|190621984|gb|EDV37508.1| GF13478 [Drosophila ananassae] Length = 1575 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 50/136 (36%), Gaps = 7/136 (5%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 N+ + + + + L + + + E+N + L + G+NL Sbjct: 899 NSPKMEIFFCILKESMHLGDRLDGSTSSQERERLVNEFNANTSVKLFLISTRAGSLGINL 958 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 G N ++ F W+ + V R + G + FVY ++ +++ + R Sbjct: 959 T-GANRVIIFDASWNP-----CHDTQAVYRIYRYGQTKPCFVYRIVMDKCLEKKIYDRQI 1012 Query: 186 TKSTIQDLLLNALKKE 201 K + D +++ E Sbjct: 1013 KKQGMSDRIVDECNPE 1028 >gi|255956043|ref|XP_002568774.1| Pc21g17780 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590485|emb|CAP96675.1| Pc21g17780 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1331 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 65/162 (40%), Gaps = 8/162 (4%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR-TLDK 96 E+ ++ I + I+ +++ P + + + + A +G K Sbjct: 1080 DPSLSSRVMILNEIINQAIAVGDKILVFSSSIPTLNYLAQVMEKTQRKYALLEGTIPTTK 1139 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +N + + + G GLN+Q N +V F ++ E + R Sbjct: 1140 RLELVRGFNNDPSTYVFLISTKAGGVGLNIQT-ANRVVIFDFEFNPT-----WEEQAIGR 1193 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ VFVY L+A T++E + + KS + LL+ Sbjct: 1194 AYRIGQKKKVFVYRLVAAGTVEEKIFCKATFKSQLAGRLLDD 1235 >gi|225467009|ref|XP_002262712.1| PREDICTED: hypothetical protein, partial [Vitis vinifera] Length = 781 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 17/143 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + ++++N ++ ++ Sbjct: 626 GEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSL 685 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ + ++ LWW+ E + R + G R V V L ++T+ Sbjct: 686 KAASLGLNMVAACH-VLLLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVLRLTVKDTV 739 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 ++ +L + K + + Sbjct: 740 EDRILALQQKKREMVASAFGEDE 762 >gi|260812970|ref|XP_002601193.1| hypothetical protein BRAFLDRAFT_183803 [Branchiostoma floridae] gi|229286484|gb|EEN57205.1| hypothetical protein BRAFLDRAFT_183803 [Branchiostoma floridae] Length = 964 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 26/242 (10%), Positives = 67/242 (27%), Gaps = 54/242 (22%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD----------------- 43 K Y + L + + + + + N + Sbjct: 515 KYYKWILTRNFEALNTKGSGHHVSLLNVMMDLKKCCNHPYLFPTAAMVTLTNKEIYKHPY 574 Query: 44 ----------------EEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ 85 E + + K+ L +++ +A +++ L L+ Sbjct: 575 LYPTDAMEAPRLPNHAYEGSGLKKNCGKLMVLGRMLKKLQAQGHRVLIFSQMTKMLDILE 634 Query: 86 KAFPQGRTLDKD----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILV 133 + I +N P + + G G+NL + + Sbjct: 635 DFCEAEGYKYERIDGGVTGTLRQDAIDRFNAPGSPHFVFLLSTRAGGLGINL-ATADTVF 693 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + W+ + +R + G V +Y + + +++E + Q + K + L Sbjct: 694 IYDSDWNP-----HNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKKKMMLTHL 748 Query: 194 LL 195 ++ Sbjct: 749 VV 750 >gi|118370404|ref|XP_001018403.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89300170|gb|EAR98158.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1547 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDP 98 K+K L+ ++ K +++ + L+ + D+ Sbjct: 1279 DSAKLKYLDALLTKLKREGHRVLIFCQMTRMIDILEDFMTRKKYKFFRLDGSCNISDRRD 1338 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + K + G G+ L ++++F+ W+ ++ + R + Sbjct: 1339 MVNEFQTSDKTFAFLLSTRAGGLGVTLTA-ADVVIFYDNDWNPT-----MDAQAMDRAHR 1392 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G + V VY L+ + TI+E +L+R + K +Q + Sbjct: 1393 IGQTKEVLVYRLVTKGTIEERILKRAQQKQMVQSTV 1428 >gi|297828221|ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arabidopsis lyrata subsp. lyrata] gi|297327832|gb|EFH58252.1| hypothetical protein ARALYDRAFT_483627 [Arabidopsis lyrata subsp. lyrata] Length = 873 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 29/235 (12%), Positives = 83/235 (35%), Gaps = 41/235 (17%) Query: 2 KQYHK-FQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYD-------EEKHWKEV 51 K Y ++EL L + + ++ + + + EE Sbjct: 311 KIYTSILRKELPGLLALSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQ 370 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPC 99 K+ L+ ++++ + +++ S L LQ ++ Sbjct: 371 ASGKLFVLDQLLKRLHDIGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFA 430 Query: 100 TIQEWNEGKIP------------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I+ ++ + + G GLNL + ++F+ W+ + Sbjct: 431 AIKNFSAKSERGLDSEVDASNAFVFMISTRAGGVGLNLVA-ADTVIFYEQDWNPQ----- 484 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL-NALKKE 201 +++ + R + G V L+ +++++E++L+R K + ++ + ++++ Sbjct: 485 VDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEK 539 >gi|225560949|gb|EEH09230.1| RING-13 finger domain-containing protein [Ajellomyces capsulatus G186AR] Length = 1205 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 71/219 (32%), Gaps = 39/219 (17%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +R+ L+ + + + ++ L V KI+ I+ Sbjct: 970 KAVERKSLPQLKKNAARSVEAKREYMRYL-------------TDNWVTSAKIEKTMEILR 1016 Query: 65 KANAA---------PIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEW 104 + IV F S L + + ++ ++ Sbjct: 1017 DIQSRIPEGDDKPEKTIVFSQFTSLLDLLQVPIEREGWGYCRYDGSMQPSHRNEAVLRFS 1076 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ + GLNL + ++ +W+ +Q I+R + G R Sbjct: 1077 DSQNHTIMLISLKAGNSGLNLVA-ASQVIILDPFWNPYLEEQAIDR-----AHRIGQMRP 1130 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V V+ ++ T+++ +L+ K + + L+ ++I Sbjct: 1131 VMVHRILVHKTVEDRILELQDRKRALIEGALDETASKSI 1169 Score = 41.3 bits (95), Expect = 0.086, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 15/65 (23%), Gaps = 6/65 (9%) Query: 3 QYHKFQRELYC----DLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + L I N ++ Q D+ KI Sbjct: 785 LYEGLESKTQIRFNRYLDEGTIGRNYSNILVLLLRLRQACCHPHLIDDLGVEANAATAKI 844 Query: 57 KALEV 61 +E Sbjct: 845 DLIEN 849 >gi|150865205|ref|XP_001384327.2| SNF2 family DNA-dependent ATPase [Scheffersomyces stipitis CBS 6054] gi|149386461|gb|ABN66298.2| SNF2 family DNA-dependent ATPase [Scheffersomyces stipitis CBS 6054] Length = 715 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 KI ++ + IIV F S ++ + T+D Sbjct: 538 PSAKISKCVELLREIFKSYPGEKIIVFSQFTSLFDIMKLVLDKEEIDFLRYDGSMTIDHK 597 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 TI+ + + + +L + GL L + ++ +W+ +E + R Sbjct: 598 NSTIKRFYQEDVKVLLLSLKAGNVGLTLT-CASHVIIIDPFWNP-----YVEEQAMDRAH 651 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G +R VFV+ ++ T++ +++ K + L+ Sbjct: 652 RIGQEREVFVHRILIAGTVESRIMELQDRKREMVGAALDE 691 >gi|328857391|gb|EGG06508.1| hypothetical protein MELLADRAFT_36161 [Melampsora larici-populina 98AG31] Length = 824 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 52/151 (34%), Gaps = 17/151 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKI 109 + ++ ++ +V F L +++ +D N + Sbjct: 664 KLNKEDHSIKSLVFSQFTVFLDLIERRLQLAGFKLARLQGHMTPEARDRTIKHFMNNNDV 723 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q ++RI + G R V V Sbjct: 724 QVFLVSLKAGGVALNLTE-ASRVFIMDPWWNPAVELQAMDRI-----HRLGQHRPVVVTR 777 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LI +N+I+ +++ + K + L + Sbjct: 778 LIIENSIESRIVELQKKKEAMTGAALGDDDQ 808 >gi|159489898|ref|XP_001702928.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas reinhardtii] gi|158270951|gb|EDO96781.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas reinhardtii] Length = 962 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 6/107 (5%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + G D+ + N IP+ G GL L + ++ W+ Sbjct: 678 EYCRIDGDVDDRQAHVARFQNSKTIPVFLLTSQVGGLGLTLTA-ADRVIIVDPAWNPS-- 734 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 I+ V R + G R V VY LI T++E + ++ K + Sbjct: 735 ---IDNQSVDRAYRMGQTRDVVVYRLITCGTVEEKIYRKQVFKGGLS 778 >gi|297795067|ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297311253|gb|EFH41677.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1305 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 17/154 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQ 102 E +K LE I + + IV + S L L+ F ++ Sbjct: 1140 SELLKCLEKIQKSGSGEKSIVFSQWTSFLDLLEIPLRRKGFEFLRFDGKLAQKGREKVLK 1199 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+NE K +L + G GLNL + + WW+ +Q I RI + G Sbjct: 1200 EFNETKQKTILLMSLKAGGVGLNLTA-ASSVFLMDPWWNPAVEEQAIMRI-----HRIGQ 1253 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR VFV I ++T++E + Q K + L Sbjct: 1254 KRTVFVRRFIVKDTVEERMQQVQARKQRMIAGAL 1287 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 13/138 (9%), Positives = 27/138 (19%), Gaps = 22/138 (15%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 N ++ Q N ++ D + + Sbjct: 995 NYANILELLLRLRQCCNHPFLVMSRADSQQYAD------------------LDSLARRFL 1036 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL---VFFSL 137 + IQ+ +G S + L + + + Sbjct: 1037 DNNPDSVSQNAPSRAYIEEVIQDLRDGNSKECPICLESADDPI-LTPCAHRMCRECLLTS 1095 Query: 138 WWDLEEHQQMIERIGVTR 155 W I R + R Sbjct: 1096 WRSPSCGLCPICRTILKR 1113 >gi|238881773|gb|EEQ45411.1| conserved hypothetical protein [Candida albicans WO-1] Length = 1100 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/218 (11%), Positives = 64/218 (29%), Gaps = 32/218 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----------HD 53 + + ++ + + + + + + + + Sbjct: 865 KTVKEHNMTEFLIFDMLHIQKL-EMSQVQKFCSQHYQHKIKSNQTLIREFIKRDNGFESS 923 Query: 54 EKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 KI +I + +IV F S + Sbjct: 924 AKIHKCLEMILELFSKNPGEKVIVFSQFTSLFDLMALVLQNQHIEFLRYDGTMSMDVKNN 983 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+E+ + +L + GL L N + +W+ +E + R + Sbjct: 984 VIKEFYQSSKNVLLLSLRAGNAGLTLT-CANHVFIMDPFWNP-----FVEEQAMGRAHRI 1037 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R VFV+ ++ T++ +++ +K + + L+ Sbjct: 1038 GQTREVFVHRVLIAGTVENRIMELQESKKHLIESALDE 1075 Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 49/171 (28%), Gaps = 10/171 (5%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI-----KALE 60 + Q+ L A + + ++ Q + + ++ +V D + + Sbjct: 712 RVQKAAKKILGEHTKNAP-ALTLLLRLRQACCHSYLVEIGEYRAKVKDSEAEASASNSKL 770 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 N A + + + +G + C + N L G Sbjct: 771 DWRSMLNNARNLKESVKQQVHSLIGSLNGEGNIENTPACPVCFDNIDIESSLLI----FG 826 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 ++ G FF ++ + RIG + Q K +LI Sbjct: 827 ECGHIICKGCCNTFFENCNAGDDDDESPHRIGECKDCQKTVKEHNMTEFLI 877 >gi|170587941|ref|XP_001898732.1| SNF2 family N-terminal domain containing protein [Brugia malayi] gi|158592945|gb|EDP31540.1| SNF2 family N-terminal domain containing protein [Brugia malayi] Length = 798 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 7/109 (6%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +++ +++N + I +L G GLNL G +I++F W+ + + Sbjct: 582 PVNERHAVAEKFNVDPSIHVLILTTNIGGEGLNLT-GADIVIFLEHDWNP-----VKDLQ 635 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G K AV VY LI + +I++ +++ + K+ + L+ A + Sbjct: 636 AMDRAHRIGQKCAVNVYRLITEGSIEQKIMRLQKFKTDTANALVGADNR 684 >gi|302814039|ref|XP_002988704.1| hypothetical protein SELMODRAFT_128555 [Selaginella moellendorffii] gi|300143525|gb|EFJ10215.1| hypothetical protein SELMODRAFT_128555 [Selaginella moellendorffii] Length = 669 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 56/145 (38%), Gaps = 17/145 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW-NEG 107 ++ +I K +A +V F S L + +F G +L + I + N+ Sbjct: 530 VKKMISKDTSAKGLVFSQFTSMLDLIGYSFELAGVKCVKLDGGMSLSQRSTAIDTFRNDP 589 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + L + G LNL + + WW+ +E R + G + + V Sbjct: 590 ECKLFLMSLKAGGVALNLT-VASYIFLMDPWWNPA-----VEHQAQDRIHRIGQYKPIRV 643 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQD 192 + +N+++E +L+ K + + Sbjct: 644 TRFVIENSVEERILKLQEKKQLVFE 668 >gi|238484253|ref|XP_002373365.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus flavus NRRL3357] gi|220701415|gb|EED57753.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus flavus NRRL3357] Length = 885 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 72/214 (33%), Gaps = 44/214 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEE----------------------KHWKEVHDEKIKA 58 + N+ +L N +H+ KI+ Sbjct: 487 NSENALQLITILKKLCNSPSLLSPRNVDEKPSETIAALLSSLPPNLLRHFSPSSSAKIRV 546 Query: 59 LEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ + + +++ ++ S L L K ++++N Sbjct: 547 LDQLLHILHTSTSEKVVLVSNYTSTLNLLATLLTSLSLPFLRLDGSTPAQKRQSLVEDFN 606 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + G GLNL G + L+ F + W+ + + R + G K Sbjct: 607 RFPTNRCFAFLLSAKAGGTGLNL-IGASRLILFDVDWNPAT-----DIQAMARIHRDGQK 660 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R +Y ++ + +++E + QR TK + D ++ Sbjct: 661 RHCRIYRILLKGSLEEKIWQRQVTKLGLADSVME 694 >gi|158285422|ref|XP_564675.3| AGAP007573-PA [Anopheles gambiae str. PEST] gi|157019984|gb|EAL41756.3| AGAP007573-PA [Anopheles gambiae str. PEST] Length = 2705 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 8/157 (5%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 V + + L +I I ++ + + I E+N Sbjct: 1545 GDRLLVFSQSLLTLNLIERFLQHNKIPGTENYWA-KNISYFRLDGSTVAQEREKLINEFN 1603 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + L + G+NL G N +V F W+ + V R + G K+ Sbjct: 1604 SNPNVHLFLVSTRAGSLGINL-VGANRVVVFDASWNP-----CHDTQAVCRVYRYGQKKP 1657 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 FVY L+ N +++ + R K + D +++ + Sbjct: 1658 CFVYRLVMDNCLEKKIYDRQINKQGMSDRIVDECNPD 1694 >gi|298711307|emb|CBJ26552.1| DNA repair and recombination protein RAD54 homolog [Ectocarpus siliculosus] Length = 1510 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 83/271 (30%), Gaps = 78/271 (28%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------------- 44 K Y +E+ L G+ N S +L N E Sbjct: 463 KIYKHLLSSKEIRHILNGKQ---TNILSSIGAMQKLCNHPKLLVEGAAGRDSGSHAEIAS 519 Query: 45 -----------------------------------EKHWKEVHDEKIKALEVIIEKA--- 66 +K K++ L ++ + Sbjct: 520 MLPAETSSSSALAEGVGGRGMSGGGGFGRRSSGGMQKGVFPEWSGKMETLFRLMREMRNT 579 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFA 114 I+V +F S L + + + K + +NE Sbjct: 580 GDDRIVVVSNFTSSLDLIGSMCRENSWPFVRLDGSTGVSKRQKMVNAFNEPGPQSFAFLL 639 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL GGN LV F W+ +++ R + G K+ FVY ++ Sbjct: 640 SSKAGGCGLNL-IGGNRLVLFDPDWNPA-----VDKQAAARVWRDGQKKRCFVYRFVSTG 693 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 TI+E V QR +K +Q+++ K+E + Sbjct: 694 TIEEKVFQRQLSKEGLQNIV--DDKEEVNSL 722 >gi|168025225|ref|XP_001765135.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162683722|gb|EDQ70130.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 793 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 26/180 (14%) Query: 46 KHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQ----------KAFPQG 91 + K+ AL ++ EK +V F+ L L+ Sbjct: 611 EQNSTKSSAKVDALINLLVAAREKDPTEKSVVFSQFSQMLNCLEGPLADVGFRFVRLDGS 670 Query: 92 RTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T K + + + + G GLNL + + WW+ + Sbjct: 671 MTSKKRQAALTAFRSKDPDSPTIFLLSLKAAGVGLNLVA-ASRVYMVDPWWNPA-----V 724 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKETIHV 205 E + R + G R V V LI +TI++ +L+ K + A ++ + + Sbjct: 725 EEQAMDRVHRLGQTRDVTVVRLIVTDTIEDRILELQERKRELATSAFEKRSAEQRRLLRI 784 Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 23/74 (31%), Gaps = 10/74 (13%) Query: 2 KQYHKFQ---RELYC-DLQGENI--EAFNSASKTVKCLQLANG----AVYYDEEKHWKEV 51 + Y K + +E+ ++ + ++ Q+ N Y + Sbjct: 462 ELYDKVEENGKEVIERFMESGTVLQNYATVLQIILRLRQICNHSALCPAYTEMFAAELNQ 521 Query: 52 HDEKIKALEVIIEK 65 D K +++K Sbjct: 522 KDPKNVPPPELLDK 535 >gi|20072056|gb|AAH26672.1| Smarca4 protein [Mus musculus] Length = 749 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 143 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 202 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 203 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 262 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 263 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ--- 318 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 319 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 367 >gi|254577371|ref|XP_002494672.1| ZYRO0A06996p [Zygosaccharomyces rouxii] gi|238937561|emb|CAR25739.1| ZYRO0A06996p [Zygosaccharomyces rouxii] Length = 1529 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 63/167 (37%), Gaps = 11/167 (6%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG 91 LQ G + K + + K +I + V F + L Sbjct: 1246 LLQYDCGKLQ----KLAILLQNLKDHGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGA 1301 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ + +N + +I S G G+NL G + ++F+ W+ +++ Sbjct: 1302 TKIEDRQVLTERFNTDPRITAFILSSRSGGLGINLT-GADTVIFYDSDWNPA-----MDK 1355 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V +Y ++ +TI+ +L++ K + ++++ Sbjct: 1356 QCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRQLDNVVIQE 1402 >gi|198412736|ref|XP_002121526.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4, partial [Ciona intestinalis] Length = 586 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 67/212 (31%), Gaps = 36/212 (16%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEE------------KHWKEVHDEKIKALEVII 63 + A + ++ ++ N + ++ ++ Sbjct: 1 KQGKGGAKALMNTIMQLRKICNHPFMFRHIEESMAEFLQIPGGIVTGPDLYRVCGKFELL 60 Query: 64 E------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 + K +++ S + L+ F D +Q++N Sbjct: 61 DRVLPKLKKYNHRVLLFCQMTSTMTILEDYFAYRGHKYLRLDGSTKADDRGLMLQKFNAP 120 Query: 108 K--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 I + + G GLNLQ + ++ + W+ + + R + G V Sbjct: 121 NSDIFIFLLSTRAGGLGLNLQS-ADTVIIYDSDWNPHQ-----DIQAQDRAHRIGQTNEV 174 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V L+ ++++E +L R K + + ++ A Sbjct: 175 RVLRLMTVSSVEEKILAAARYKLNVDEKVIQA 206 >gi|324500193|gb|ADY40099.1| Helicase mot1 [Ascaris suum] Length = 1698 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 7/121 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 L + + + +N + I +L + G GLNL G ++++F W Sbjct: 1475 LDIRYSVLDGTVPVSERHAIAENFNNDPGIDVLLLTTSVGGEGLNLT-GADVVIFVEHDW 1533 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + + + R + G KR V VY LI + +I++ +++ + K+ + L+ A Sbjct: 1534 NP-----VKDLQAMDRAHRIGQKRTVNVYRLITEASIEQKIMRYQKFKTDTANALVGADN 1588 Query: 200 K 200 + Sbjct: 1589 R 1589 >gi|225468252|ref|XP_002267335.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] Length = 867 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 17/143 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + ++++N ++ ++ Sbjct: 712 GEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSL 771 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ + ++ LWW+ E + R + G R V V L ++T+ Sbjct: 772 KAASLGLNMVAACH-VLLLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVLRLTVKDTV 825 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 ++ +L + K + + Sbjct: 826 EDRILALQQKKREMVASAFGEDE 848 >gi|15239896|ref|NP_199166.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] gi|60390960|sp|Q9FIY7|SM3L3_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Short=SMARCA3-like protein 3 gi|10178192|dbj|BAB11616.1| DNA repair protein-like [Arabidopsis thaliana] gi|332007595|gb|AED94978.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana] Length = 1277 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 17/154 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQ 102 E +K LE I + + IV + S L L+ F ++ Sbjct: 1112 SELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLK 1171 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+NE K +L + G GLNL + + WW+ +Q I RI + G Sbjct: 1172 EFNETKQKTILLMSLKAGGVGLNLTA-ASSVFLMDPWWNPAVEEQAIMRI-----HRIGQ 1225 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR VFV I ++T++E + Q K + L Sbjct: 1226 KRTVFVRRFIVKDTVEERMQQVQARKQRMIAGAL 1259 Score = 36.3 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 13/138 (9%), Positives = 27/138 (19%), Gaps = 22/138 (15%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 N ++ Q N ++ D + + Sbjct: 967 NYANILELLLRLRQCCNHPFLVMSRADSQQYAD------------------LDSLARRFL 1008 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL---VFFSL 137 + IQ+ +G S + L + + + Sbjct: 1009 DNNPDSVSQNAPSRAYIEEVIQDLRDGNSKECPICLESADDPV-LTPCAHRMCRECLLTS 1067 Query: 138 WWDLEEHQQMIERIGVTR 155 W I R + R Sbjct: 1068 WRSPSCGLCPICRTILKR 1085 >gi|322792800|gb|EFZ16633.1| hypothetical protein SINV_04571 [Solenopsis invicta] Length = 3043 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + I E+N KI L + G+NL G N + F W+ Sbjct: 2066 YYRLDGSTSALEREKLINEFNSNPKIHLFLVSTRAGSLGINL-VGANRAIVFDASWNP-- 2122 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V R + G K+ FVY L+ N ++ + R +K + D +++ Sbjct: 2123 ---CHDTQAVCRVYRYGQKKPCFVYRLVTDNCLERKIYDRQISKQGMADRVVD 2172 >gi|225682466|gb|EEH20750.1| chromodomain-helicase-DNA-binding protein [Paracoccidioides brasiliensis Pb03] Length = 1605 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 76/209 (36%), Gaps = 31/209 (14%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEKA 66 + E N + ++ + Y + + V+ K++ LE+++ K Sbjct: 953 KQTERHNLNNILMQLRKCLCHPFVYSKAIEERTVNAALSHRNLVEASSKLQLLEMLVPKL 1012 Query: 67 N--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL-- 112 +++ F +L ++ L + I ++N P Sbjct: 1013 QERGHRVLIFSQFLDNLDVIEDFLDGLGLLHRRLDGSMTSLQKQKQIDDYNAPDSPYFAF 1072 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G G+NL + ++ ++ + + ++R + G ++ V V+ L+ Sbjct: 1073 LLSTRSGGVGINL-ATADTVIIMDPDFNPHQ-----DIQALSRAHRIGQQKKVLVFQLVT 1126 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + +E ++Q + K + +L+ + E Sbjct: 1127 KASAEEKIMQIGKKKLALDQVLIEHMDAE 1155 >gi|290998710|ref|XP_002681923.1| SNF2 domain-containing protein [Naegleria gruberi] gi|284095549|gb|EFC49179.1| SNF2 domain-containing protein [Naegleria gruberi] Length = 1231 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 60/158 (37%), Gaps = 21/158 (13%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPC 99 K+K L+ ++ K +++ + L++ + R + Sbjct: 1031 DSGKLKVLDQLLSKLKQEGHRVLIFCQMTKMMDLLEEYMYKRRYTFFRLDGSTGISERRD 1090 Query: 100 TIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + + G G+ L + ++F+ W+ + + R Sbjct: 1091 MVDAFQNQRVDPVFAFLLSTKAGGLGITLTA-ADTVIFYDSDWNPTL-----DAQAMDRV 1144 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V +Y LI +N+++E +L + KSTIQ+ + Sbjct: 1145 HRIGQTKPVTIYRLITKNSVEERILAIAKQKSTIQETV 1182 >gi|308810895|ref|XP_003082756.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein (ISS) [Ostreococcus tauri] gi|116061225|emb|CAL56613.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein (ISS) [Ostreococcus tauri] Length = 1008 Score = 84.8 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 17/140 (12%) Query: 69 APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 IV + + + ++ + + + +Q + + + ++ Sbjct: 856 NKAIVFSQYTAMIEIVEWRLKKAKFTIAKLLGSMPVTQRAANLQAFREDPNVSVILMSLK 915 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G GLNLQ N + WW+ V R + G R V + TI+ Sbjct: 916 SGGEGLNLQA-ANYVYVLEPWWNPAVEM-----QAVMRAHRIGQHRPVTAVRFSTKGTIE 969 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E +++ K + + ++ Sbjct: 970 ERMMELQEKKQLVFEGCMDG 989 >gi|322499633|emb|CBZ34707.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1092 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAF----------P 89 + K +H K+ A+ IEK ++V F S L Q Sbjct: 911 IFARLDPQKPLHGTKLDAIANYIEKVPKDEKVVVFSQFGSMLDLTQYWLQRRSIRAVKLC 970 Query: 90 QGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 TL + +Q + ++ + ++ + G GLNLQ N +V WW+ Sbjct: 971 GSLTLTQRQSVLQAFLHDQNVRVILISLKAGGEGLNLQ-VANHVVLTDPWWNPAVEM--- 1026 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V R + G R V + +++++E + K + + ++ Sbjct: 1027 --QAVQRAHRIGQTRPVHAVRFVTEHSVEERMADLQDKKMLVFEGTIDG 1073 >gi|156384005|ref|XP_001633122.1| predicted protein [Nematostella vectensis] gi|156220188|gb|EDO41059.1| predicted protein [Nematostella vectensis] Length = 627 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 65/170 (38%), Gaps = 19/170 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQG----------RT 93 K + L ++ + N +++ F + ++ Sbjct: 462 GEELLYDSGKFERLNAMLPEMKDNGDRVLLFSQFTLVMDIIEVYLQHCGYRYFRLDGQTP 521 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + I +N + I L + G G+NL N+++ + ++ ++ Sbjct: 522 VVERQPMIDNFNSDPDIFLFLLSTKAGGLGINLTS-ANVVILHDIDFNP-----YNDKQA 575 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G R V VY LIA++T+++ +L+ +K ++ +++A E Sbjct: 576 EDRCHRVGQTRDVHVYRLIAKDTVEDNMLKCANSKLKLEKDVVSADNDEG 625 >gi|156088007|ref|XP_001611410.1| SNF2 family N-terminal domain containing protein [Babesia bovis] gi|154798664|gb|EDO07842.1| SNF2 family N-terminal domain containing protein [Babesia bovis] Length = 860 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---------- 96 + + K++ + II+ + ++ F L L+ + + Sbjct: 694 QFLESAKVQEMFKIIDRVEQAGKKALIFSQFTMYLDLLETCLGLHKPQLEYLRLDGGHNP 753 Query: 97 --DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + N+ I LL + G GLNL + ++ L W+ + Sbjct: 754 STRTDIVERFTNDPNITLLLISTKAGGTGLNLT-VASTVILMDLDWNP-----HNDAQAE 807 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G V VY L+ ++TI+E + + + K + D Sbjct: 808 NRSHRIGQTEPVDVYKLMCEDTIEEYIWECCQRKLLLDDA 847 >gi|289622059|emb|CBI51237.1| unnamed protein product [Sordaria macrospora] Length = 1194 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 52/152 (34%), Gaps = 18/152 (11%) Query: 64 EKANAAPIIVAYHFNSDLARLQK------------AFPQGRTLDKDPCTIQEWNEGKIPL 111 + I+ + S L ++ +D + + + Sbjct: 1027 FQQTDEKTIIFSQWTSHLDLIECSLKFKLNIKYHRYTGNMPRSQRDNAIQEFVENPDVKV 1086 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + GLNL + ++ +W+ IE V R + G K V +Y ++ Sbjct: 1087 LLVSLKAGNAGLNLT-VASRVIVCDPFWNP-----FIEDQAVDRAHRIGQKSEVHIYKIL 1140 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + TI++ + + K I + L+ + + + Sbjct: 1141 VEETIEDRITELQNVKRDIVETALDETQSKQL 1172 Score = 35.9 bits (81), Expect = 3.5, Method: Composition-based stats. Identities = 2/21 (9%), Positives = 4/21 (19%) Query: 21 EAFNSASKTVKCLQLANGAVY 41 N ++ Q Sbjct: 848 NYSNILVLLLRLRQACCHPHL 868 >gi|320580749|gb|EFW94971.1| SNF2 family DNA-dependent ATPase [Pichia angusta DL-1] Length = 1485 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 56/160 (35%), Gaps = 17/160 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQEW 104 + ++ I+E +IV F + K + Sbjct: 796 LTLIKDILETKPGEKVIVFSQFMVLFDILELFLRDHGIEYLRYDGSMNVEAKSASVATFY 855 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ + GL L + ++ +W+ +E+ R + R Sbjct: 856 QDPNKKVMLLSLKAGNVGLTLT-CASHVIILEPFWNP-----FVEKQAQDRVHRISQVRE 909 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V+V+ ++ +NT+++ +++ K + + L+ ++ ++ Sbjct: 910 VYVHRILIRNTVEDRIIELQAEKEKLVESALDPTARQQVN 949 >gi|50293735|ref|XP_449279.1| hypothetical protein [Candida glabrata CBS 138] gi|49528592|emb|CAG62253.1| unnamed protein product [Candida glabrata] Length = 1476 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 78/228 (34%), Gaps = 39/228 (17%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------- 50 + Y + Y L G F+ + ++ +N +D + Sbjct: 639 EYYKNILTKNYSALTAGAKGGRFSMLNIMNTLMKASNHPYLFDSAEEKVLEKFGAGNMSR 698 Query: 51 --------VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 + K+ L+ ++ K + +++ L L Sbjct: 699 ENILRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDG 758 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++ I +N + + G G+NL + ++ F W+ + Sbjct: 759 TVPSNQRRIAIDHFNAPGSDDFVFLLSTRAGGLGINLMT-ADTVIIFDSDWNPQA----- 812 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G K V VY L++++T++E VL+R R K ++ +++ Sbjct: 813 DLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS 860 >gi|56474875|gb|AAV91782.1| Brg1 [Xenopus laevis] Length = 1600 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 74/231 (32%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ +++N + + + H Sbjct: 992 LYRHMQGKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKISNHPYMFQQIEESFSEHLGFT 1051 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ + + ++ F Sbjct: 1052 GGIVQGQDVYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRGFKYLRL 1111 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D ++ +NE + + G GLNLQ + +V F W+ + Sbjct: 1112 DGTTKADDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVVIFDSDWNPHQ--- 1167 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1168 --DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1216 >gi|226289867|gb|EEH45351.1| chromodomain-helicase-DNA-binding protein [Paracoccidioides brasiliensis Pb18] Length = 1348 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 72/198 (36%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEKAN--AAPIIVAY 75 ++ + Y + + V+ K++ LE+++ K +++ Sbjct: 964 LMQLRKCLCHPFVYSKAIEERTVNAALSHRNLVEASSKLQLLEMLVPKLQERGHRVLIFS 1023 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F +L ++ L + I ++N P S G G+ Sbjct: 1024 QFLDNLDVIEDFLDGLGLLHRRLDGSMTSLQKQKQIDDYNAPDSPYFAFLLSTRSGGVGI 1083 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + + ++R + G ++ V V+ L+ + + +E ++Q Sbjct: 1084 NL-ATADTVIIMDPDFNPHQ-----DIQALSRAHRIGQQKKVLVFQLVTKASAEEKIMQI 1137 Query: 184 LRTKSTIQDLLLNALKKE 201 + K + +L+ + E Sbjct: 1138 GKKKLALDQVLIEHMDAE 1155 >gi|209875623|ref|XP_002139254.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209554860|gb|EEA04905.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1071 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 81/224 (36%), Gaps = 30/224 (13%) Query: 6 KFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKE--------VHD 53 + + ++ + + ++ + Q A G +Y E ++ Sbjct: 843 EMEMHQIKEINKGEVNKNLLQISKTTQLPEQSQQAKGVIYEREYSLIDTSGTYWKPTIYS 902 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 KI+ L + K + +++ + S L ++ A + I Sbjct: 903 TKIRTLLEYLHKDINDNQKVVIFSQWTSFLDIIEMALNCHSFNFRRLDGSISMSKRGSII 962 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++E K +L + G GLNL + LWW+ +E + R + G Sbjct: 963 SWFSESKQKILLVSIKAGGVGLNLVA-ATRVYLTDLWWNPA-----VEEQALQRIYRLGQ 1016 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V +Y ++ + +++E +LQ + KS I +L E + + Sbjct: 1017 TKTVHMYRIVCRKSVEERILQLHQLKSDISSKILGDETNEKVRI 1060 >gi|19111970|ref|NP_595178.1| ATP-dependent DNA helicase Rhp16b (predicted) [Schizosaccharomyces pombe 972h-] gi|1723497|sp|Q10332|YBMA_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C582.10c gi|5420446|emb|CAB46673.1| ATP-dependent DNA helicase Rhp16b (predicted) [Schizosaccharomyces pombe] Length = 830 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 58/178 (32%), Gaps = 26/178 (14%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANA---------APIIVAYHFNSDLAR---------- 83 + KI+ + I+ I+ F + L Sbjct: 636 QDPNDKTLYKSSKIREILKILSLDEQEEDDTVRGLRKTIIFSQFTTFLDIIDLHLRKAGI 695 Query: 84 -LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + ++ ++ +L GLNL + ++ +WW+ Sbjct: 696 GFVRYDGRMNNRAREKSLDLLRSDSGTQVLLCSLKCGALGLNLT-CASRVILCDVWWNPA 754 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 IE + R + G +R V VY L+ +NTI+E +++ K + L KK Sbjct: 755 -----IEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVELQNLKRDLAKQALGDGKK 807 >gi|332019859|gb|EGI60320.1| DNA repair and recombination protein RAD54B [Acromyrmex echinatior] Length = 857 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 71/205 (34%), Gaps = 40/205 (19%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH--------------------DEKIKALEVIIE- 64 S ++ N + E+ K+ ++ ++ Sbjct: 561 LSIITALKKICNHPNLFLNEEEKALYDVLSKVSYLSQIKRDENFTEYCGKVTIVQTLMRN 620 Query: 65 -KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE--GKIPL 111 K +++ ++ L L+ + +++N + Sbjct: 621 LKKTDEKLVLVSYYTQTLDLLETICNMERLKFLRLDGATSSTIRLKITEQFNTQTDNSKV 680 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G GLNL G + LV F W+ Q + RI + G KR V++Y L+ Sbjct: 681 LLLSAKAGGVGLNL-PGASRLVLFDSDWNPASDMQAMARIW-----RDGQKRNVYIYRLL 734 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 TI+E + QR +K+ + + +++ Sbjct: 735 TTGTIEEKIYQRQISKANLSETVVD 759 >gi|302144115|emb|CBI23220.3| unnamed protein product [Vitis vinifera] Length = 679 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 17/142 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-----------DKDPCTIQEWNEGKIP 110 ++E +A IV F S L + + Q KD + + Sbjct: 543 MVEMDGSAKGIVFSQFTSFLDLISYSLHQSGINCVQLVGKMTATAKDAAVKRFNEDPDCK 602 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + S G LNL + + WW+ QQ +RI + G + V V Sbjct: 603 IFLTSLKSGGAALNL-PVASYVFLMEPWWNPFVEQQAYDRI-----HRIGQYKPVRVIKF 656 Query: 171 IAQNTIDELVLQRLRTKSTIQD 192 I +NTI+E +L+ K ++ + Sbjct: 657 IIENTIEERILELQEKKESLSE 678 Score = 35.5 bits (80), Expect = 5.0, Method: Composition-based stats. Identities = 9/99 (9%), Positives = 24/99 (24%), Gaps = 4/99 (4%) Query: 3 QYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + Q E ++ + + + Q + K + + D + Sbjct: 403 LYKECQLEFNRYVEDGTLMNYYVHILELITRLRQALDHPYLVVHSKSGEALCDICKWVAK 462 Query: 61 VIIEKANAAPIIVAY--HFNSDLARLQKAFPQGRTLDKD 97 ++ + A F L + + Sbjct: 463 DLVVTSCGHTFCKACLEDFTKILGKSLCPTCSLPFTPRK 501 >gi|196005243|ref|XP_002112488.1| hypothetical protein TRIADDRAFT_25002 [Trichoplax adhaerens] gi|190584529|gb|EDV24598.1| hypothetical protein TRIADDRAFT_25002 [Trichoplax adhaerens] Length = 807 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 10/120 (8%) Query: 81 LARLQKAFPQGRTLDK-DPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFS 136 L+ GRT + I ++N + + G+NL + +V F Sbjct: 610 LSYEDYCRMDGRTSAELRQRYIDKFNNSNSYRCRVFLISTRAGSLGINLTA-ASRVVLFD 668 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + W+ + + R + G K+ V+VY L+A+ T+++ + +R TK ++ +++ Sbjct: 669 VGWNPS-----YDMQAIFRAYRFGQKKTVYVYRLVAKGTMEQKIYERQVTKQSLAYRVID 723 >gi|296808475|ref|XP_002844576.1| RAD54B protein [Arthroderma otae CBS 113480] gi|238844059|gb|EEQ33721.1| RAD54B protein [Arthroderma otae CBS 113480] Length = 960 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 9/109 (8%) Query: 91 GRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 K + ++N + G GLNL G + LV F + W+ Sbjct: 686 STPATKRQALVDDFNRSSPSACFAFLLSAKAGGTGLNL-IGASRLVLFDVDWNPAT---- 740 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G KR +Y L+ + I+E + QR TK + D +++ Sbjct: 741 -DLQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQRQVTKLGLADSVMD 788 >gi|84998504|ref|XP_953973.1| recombinational repair (RAD54 ) protein [Theileria annulata] gi|65304971|emb|CAI73296.1| recombinational repair (RAD54 homologue) protein [Theileria annulata] Length = 806 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 73/234 (31%), Gaps = 48/234 (20%) Query: 3 QYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 Y F + + + +E+ + S ++L N Sbjct: 413 IYKSFVNSKRWKNIMNQDRVESR-ALSAIQSLMKLCNHPYLIKRGGLMSSPDVDSLLLDI 471 Query: 52 ----HDEKIKAL--------------EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ--- 90 K K I K + +++ ++ L ++ + Sbjct: 472 ENATKSSKYKCCRCDLSGKFLVLFRLLYQIRKNSNDRVVIISNYTQTLDLFERLCKECSY 531 Query: 91 -------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G ++ K + +N+ + + G G+NL G N LV F W+ Sbjct: 532 PFERLDGGTSIKKRHKLVTTFNDPNSNSFVFLLSSKAGGCGINL-IGANRLVLFDPDWNP 590 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ + R + G + ++Y + TI+E + QR K + +L+ Sbjct: 591 AN-----DKQALARVWRDGQTKVCYIYRFFSTGTIEEKIYQRQICKDGLSSMLV 639 >gi|38566825|emb|CAE76132.1| related to helicase-DNA-binding protein [Neurospora crassa] Length = 1678 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 31/195 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEK--ANAAPIIVAY 75 ++ + Y + + + K+ LEV++ K +++ Sbjct: 1017 LMQLRKCLCHPFVYSQSIEDRNLSPEVTKRNLIEASSKLLLLEVMLPKLRERGHRVLIFS 1076 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F L L+ + I +N L + G G+ Sbjct: 1077 QFLDQLTILEDFLAGMDLPYQRLDGSQSSMEKQKRIDAFNAPDSQLFCMLLSTRAGGVGI 1136 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ W+ + + ++R + G ++ V + L+ ++ +E +LQ Sbjct: 1137 NL-ATADTVIILDPDWNPHQ-----DIQALSRAHRIGQQKKVLCFQLMTVDSAEEKILQI 1190 Query: 184 LRTKSTIQDLLLNAL 198 R K + LL+ + Sbjct: 1191 GRKKMALDHLLIETM 1205 >gi|225468256|ref|XP_002267495.1| PREDICTED: hypothetical protein isoform 3 [Vitis vinifera] Length = 835 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 17/143 (11%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + ++++N ++ ++ Sbjct: 680 GEKAIVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSL 739 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ + ++ LWW+ E + R + G R V V L ++T+ Sbjct: 740 KAASLGLNMVAACH-VLLLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVLRLTVKDTV 793 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 ++ +L + K + + Sbjct: 794 EDRILALQQKKREMVASAFGEDE 816 >gi|255718473|ref|XP_002555517.1| KLTH0G11132p [Lachancea thermotolerans] gi|238936901|emb|CAR25080.1| KLTH0G11132p [Lachancea thermotolerans] Length = 1339 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K+K L+ ++ K +++ + + +++ + + Sbjct: 1174 STKLKKLDELLVDLKKGDHRVLIYFQMTKMMDLMEEYLTYRQYKHIRLDGSSKLEDRRDL 1233 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1234 VHDWQTKPDIFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1287 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R V VY L+ + TI+E + R + K +Q +++ ++ Sbjct: 1288 GQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEGKTQD 1329 >gi|260815495|ref|XP_002602508.1| hypothetical protein BRAFLDRAFT_93815 [Branchiostoma floridae] gi|229287819|gb|EEN58520.1| hypothetical protein BRAFLDRAFT_93815 [Branchiostoma floridae] Length = 1002 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 56/203 (27%), Gaps = 49/203 (24%) Query: 3 QYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y Q + G + + ++ ++ N Sbjct: 408 LYSHMQSKGVLLTDGSEKDKKGRGGTKTLMNTIMQLRKICNHPF---------------- 451 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF--A 114 F + + + +NE P Sbjct: 452 -------------------MFQHIEVCVTCCLDGTTKSEDRSQLLHLFNEKDSPYFLFLL 492 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNLQ + +V F W+ + + R + G K V V L+ N Sbjct: 493 STRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQAQDRAHRIGQKSEVRVLRLMTIN 546 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 +++E +L R K + + ++ A Sbjct: 547 SVEEKILAAARFKLNVDEKVIQA 569 >gi|241720419|ref|XP_002413614.1| E1A-binding protein p400, putative [Ixodes scapularis] gi|215507430|gb|EEC16922.1| E1A-binding protein p400, putative [Ixodes scapularis] Length = 2377 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 66/181 (36%), Gaps = 39/181 (21%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKA 87 ++ +Q G K++ L+ ++ + +++ L L++ Sbjct: 1157 LRLIQYDCG----------------KLQVLDRLLWQLRGGQHRVLIFTQMTRMLDILEQF 1200 Query: 88 -FPQGRTLDK---------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 G T + ++ +N + +I S G G+NL G + +VF+ Sbjct: 1201 LNYHGHTYLRLDGSTRVDQRQALMERFNADRRIFCFILSTRSGGIGVNLT-GADTVVFYD 1259 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ ++ R + G R V +Y T++E +L++ K + D+ + Sbjct: 1260 SDWNPT-----MDAQAQDRCHRIGQTRDVHIYR----QTVEENILKKATQKRMLGDVAIE 1310 Query: 197 A 197 Sbjct: 1311 G 1311 >gi|326437899|gb|EGD83469.1| hypothetical protein PTSG_04077 [Salpingoeca sp. ATCC 50818] Length = 1562 Score = 84.4 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 58/171 (33%), Gaps = 17/171 (9%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG------ 91 + E + + ++ + ++ + IV + S L +Q+A G Sbjct: 1366 HSSDPSEPFKYSTKIRALLSEIKAMRQEDESNKCIVFSQWTSMLDLIQRAVESGGYTTAR 1425 Query: 92 -----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++ + S G GLNL + ++ WW+ +Q Sbjct: 1426 LDGSMSQQERSRALATFKSDPTCTVFLITLRSGGVGLNLTA-ASHVMLMDPWWNPSVEEQ 1484 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I+R+ + G + V V I T++E + K + L + Sbjct: 1485 AIDRV-----HRIGQDKPVCVKRFIMLGTVEERIRVLQAKKCQLVQSALAS 1530 >gi|312220832|emb|CBY00773.1| hypothetical protein [Leptosphaeria maculans] Length = 1533 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 17/150 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKI 109 + K IV F S L ++ + + +I + + Sbjct: 886 KLRSKKQTLKSIVFSQFTSMLQLIEWRLRRAGFNTVMLDGSMSPAQRQKSIDHFMTNPDV 945 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G KR + Sbjct: 946 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQKRPCVITR 999 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 L +++++ ++ K+ + +N K Sbjct: 1000 LCIEDSVESRMVALQEKKAAMIAGTVNNDK 1029 >gi|195446151|ref|XP_002070651.1| GK12181 [Drosophila willistoni] gi|194166736|gb|EDW81637.1| GK12181 [Drosophila willistoni] Length = 1953 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 33/256 (12%), Positives = 77/256 (30%), Gaps = 62/256 (24%) Query: 1 MKQYHKFQRELYCDLQGENIEAF-----------------NSASKTVKCLQLANGAVYYD 43 ++ Y F ++ D + ++ + + N Sbjct: 1635 LRLYEDFSKKHLKDCLDKLGDSPGAATGTTTSTENLNGRTHIFQALRYLQNVCNHPKLVL 1694 Query: 44 EEKHWKEV----------------HDEKIKALEVIIEKA---------NAAPIIVAYHFN 78 + H K+ AL+ ++ + ++ Sbjct: 1695 RQSEELGPIVTQLALSNSTLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLK 1754 Query: 79 SDLARLQK-------------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 + L ++ + + +N + I +L G GLN Sbjct: 1755 AMLDIVEHDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTLVGGLGLN 1814 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + ++F W+ M + + R + G K+ V VY LI +N+++E ++ Sbjct: 1815 LT-GADTVIFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQ 1868 Query: 185 RTKSTIQDLLLNALKK 200 + K + +++A Sbjct: 1869 KFKILTANTVVSAENA 1884 >gi|145238522|ref|XP_001391908.1| DNA excision repair protein (Rad26L) [Aspergillus niger CBS 513.88] gi|134076397|emb|CAK48215.1| unnamed protein product [Aspergillus niger] Length = 1013 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + + K+ + AN ++V H L LQ F + Sbjct: 613 NYANPEFCGKWKVLRRLLKWWHANGDKVLVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMS 672 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++N + + S G GLN+ N +V W+ + Sbjct: 673 YEERTKVVDDFNSNPRQFVFLISTRSGGVGLNITS-ANKVVIVDPNWNPSH-----DLQA 726 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ LI+ TI+E+V R K + Sbjct: 727 QDRAYRIGQSRDVEVFRLISAGTIEEIVYARQIYKQQQAN 766 >gi|145475071|ref|XP_001423558.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124390619|emb|CAK56160.1| unnamed protein product [Paramecium tetraurelia] Length = 1127 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 52/137 (37%), Gaps = 6/137 (4%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +I + I+ + + Q + D+ + KI Sbjct: 909 WRVLIFCQMTRMLDILEEYMLHKGYTYFRMDGQCQINDRRDMVNEFQQNDKIFAFLLSTR 968 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+ L + ++F+ W+ ++ R + G + V+VY LI + TI+ Sbjct: 969 AGGLGITLTQ-ADAVIFYDNDWNPT-----MDAQATDRAHRIGRTKDVYVYRLITKGTIE 1022 Query: 178 ELVLQRLRTKSTIQDLL 194 E +++R + K +Q + Sbjct: 1023 ERIVKRAQQKQNVQSTV 1039 >gi|39965277|ref|XP_365085.1| hypothetical protein MGG_09930 [Magnaporthe oryzae 70-15] gi|145013168|gb|EDJ97809.1| hypothetical protein MGG_09930 [Magnaporthe oryzae 70-15] Length = 941 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 65/197 (32%), Gaps = 26/197 (13%) Query: 18 ENIEAFNSASKTVKCLQLANG-------AVYYDEEKHWKEVHDEKIKALEVIIEKA--NA 68 + + ++ + + + + + K++ L ++ + N Sbjct: 718 KQDNKQHLIAELMDLSDFELHVWCVDEPCIKKFDVEKDSWMESGKVQKLLELLRQFRKNG 777 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPA 117 ++ F + L + I E+N + Sbjct: 778 DRALIFTRFAKVIEILTECLSTAEVPHLTFQGSTAVDMRQDLIDEFNENKDLTAFLLTTG 837 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL N ++ F + ++ + R + G R V V LI++++I+ Sbjct: 838 AGGTGINL-ASANKVIIFDQSDNPQD-----DVQAENRAHRFGQTRPVEVIRLISRDSIE 891 Query: 178 ELVLQRLRTKSTIQDLL 194 ELV + + K + + + Sbjct: 892 ELVYKACQKKLELANRV 908 >gi|291235335|ref|XP_002737602.1| PREDICTED: DNA excision repair protein ERCC-6-like [Saccoglossus kowalevskii] Length = 2298 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 69/251 (27%), Gaps = 61/251 (24%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY---------------YDEEK 46 K Y F +++ + + + ++ + D Sbjct: 388 KIYQDFVE--TPEVRQLLMTTRSPLAMLTMLKKICDHPRLLNKRACGMLNLEGEECDPYG 445 Query: 47 HWKEV------------------------HDEKIKALEVIIE--KANAAPIIVAYHFNSD 80 + + K+ L ++E + +V Sbjct: 446 DYSDTASQISSSECAADNIDNVSISALVEESGKLVVLISLLENLRDEGHRTLVFSQSKKM 505 Query: 81 LARLQKAFPQGR-----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 L +QK + L+ I ++ + G GL L Sbjct: 506 LDIMQKVLEEKNFKLIRIDGSIRKLEDREKLINKFQRNSSYSVFLLTTGVGGIGLTLTA- 564 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + +V F W+ + V R + G K+ V +Y LI +++E + +R K Sbjct: 565 ADRVVIFDPSWNPAT-----DSQAVDRAYRLGQKKTVVIYRLITCGSVEEKIYRRQIFKD 619 Query: 189 TIQDLLLNALK 199 +I + K Sbjct: 620 SITKQATGSSK 630 >gi|190346274|gb|EDK38320.2| hypothetical protein PGUG_02418 [Meyerozyma guilliermondii ATCC 6260] Length = 847 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 56/161 (34%), Gaps = 21/161 (13%) Query: 52 HDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDK 96 KI+AL + K + IV F S L ++ + + Sbjct: 674 SSTKIEALVEELYKLRSDRHTIKSIVFSQFTSMLDLIEWRLKRAGFETVKLQGSMSPQQR 733 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D + + + G LNL + + WW+ Q ++R+ Sbjct: 734 DNTIRHFMENTGVEVFLVSLKAGGVALNL-CEASQVFLMDPWWNPSVEWQSMDRV----- 787 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR + + +++I+ +++ K+ + + +N+ Sbjct: 788 HRIGQKRPIRITRFCIEDSIESKIIELQEKKANMINATINS 828 >gi|156545712|ref|XP_001604847.1| PREDICTED: similar to PASG [Nasonia vitripennis] Length = 1193 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 61/186 (32%), Gaps = 28/186 (15%) Query: 33 LQLANGAVYYDEE---------KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 + N KI L+ +++K N +++ L Sbjct: 598 RHVVNHPYLIHYPLTDAGDYKVDENIIKASGKILVLDALLKKLYKNGHKVLLFSTMTMVL 657 Query: 82 ARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 ++ D +I + ++ L + GLNL + Sbjct: 658 DVIEDYLSLRGFKYVRLDGAVAYDDRKDSIDSFQKNPEVFLFLLTTKAGAVGLNL-AAAD 716 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + W+ + + + R + G + V VY L + T+DE +++R K + Sbjct: 717 TVIIYDSDWNPQN-----DLQAMARCHRIGQTKPVAVYRLCTKGTVDEAIIKRANAKRFL 771 Query: 191 QDLLLN 196 + +++ Sbjct: 772 EKAVIS 777 >gi|170096925|ref|XP_001879682.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164645085|gb|EDR09333.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 984 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 54/173 (31%), Gaps = 19/173 (10%) Query: 45 EKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA-----------RLQKAFPQG 91 K+ AL + ++ I + S L R + + Sbjct: 785 RGDDDMEPSTKMLALIDYLKEWESTGDKTICYSQWTSMLDLIETLFSRHGIRSLRFDGKM 844 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D G ++ GLNL N +V L W+ E Sbjct: 845 DRTSRDATLASFKQIGGPKVILISTKCGSVGLNLVS-ANRIVNMDLSWNYAA-----ESQ 898 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G ++ V V L+ +NTI+E +L+ K + + L +H Sbjct: 899 AYDRCHRIGQEKTVHVKRLVVENTIEERMLKLQDVKVGLAEAALGEGTGAKLH 951 Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 16/153 (10%), Positives = 38/153 (24%), Gaps = 14/153 (9%) Query: 3 QYHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y F++ L E ++ QL E + Sbjct: 437 VYDCFEKRTKIRLNKFIRERTLLKNHAAVLVMILRLRQLCCHPHLILSLTDGYEDPTLLV 496 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 + ++ A ++ + +++ +K F + + E + + Sbjct: 497 ASDAE--KELGRAKKLMGAAWVAEV---KKRFLLRAAVSELLDFSDEADAPEANCPVCKD 551 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + G+ + F LE I Sbjct: 552 MYINDSGRILACGHEICF---DCSLELKNAPIA 581 >gi|297735171|emb|CBI17533.3| unnamed protein product [Vitis vinifera] Length = 800 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 70/192 (36%), Gaps = 29/192 (15%) Query: 28 KTVKCLQLANGA-----------VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 V+ + N +Y E+ ++ ++ + A +++ Sbjct: 519 LMVQLRKNCNHPDLLESAFDGSYLYPPVEQIVEQCGKFRLLDRLLARLFARKHKVLIFSQ 578 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLN 124 + L ++ F + LD+ I+E+N+ + + G G+N Sbjct: 579 WTKILDIMEYYFSEKGLEVCRIDGSVRLDERKRQIEEFNDMNSNCRVFLLSTRAGGLGIN 638 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + + + W+ + ++ + R + G + V VY L +I+ +L+R Sbjct: 639 LTA-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRMLKRA 692 Query: 185 RTKSTIQDLLLN 196 +K ++ +++ Sbjct: 693 FSKLKLEHVVIG 704 >gi|189203985|ref|XP_001938328.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985427|gb|EDU50915.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1118 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 21/203 (10%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAV--YYDEEKHWKEVHDEKIKALEVIIE 64 + E + + + I + +C QLA+ E ++ + + K+ L +++ Sbjct: 851 LKEETFAESNPDIIYEELELYQDYQCHQLASKYRALKKFELQNHEWMDSGKVAKLLALLK 910 Query: 65 KA--NAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPCTIQ-EWNEGKIPL 111 K N +V F S D + + + + + I L Sbjct: 911 KYKENGDRALVFSQFTSVMDILGWVFDDHDINFMRMDGSTPIQERQSLMDVFYQDESIQL 970 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 S G G+NL N ++ F ++ ++ + R + G R V V L+ Sbjct: 971 FMISTKSGGAGINL-ACANKVIIFDSSFNPQD-----DIQAENRAHRVGQTREVEVVRLV 1024 Query: 172 AQNTIDELVLQRLRTKSTIQDLL 194 ++T++E + +K + ++ Sbjct: 1025 TKDTVEEQIYALGVSKLELDKMV 1047 >gi|58263400|ref|XP_569110.1| hypothetical protein CNB01040 [Cryptococcus neoformans var. neoformans JEC21] gi|57223760|gb|AAW41803.1| hypothetical protein CNB01040 [Cryptococcus neoformans var. neoformans JEC21] Length = 1277 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 21/151 (13%) Query: 62 IIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGK--- 108 IIE+ + IIV F + + D+ TI+++N Sbjct: 1107 IIEQDPSQKIIVFSQFVEYIDLCSIFLRRRNIPHAKYVGSMKQDEREDTIKDFNRPMEED 1166 Query: 109 --IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 L G GLNL N ++ L W+ E V R + G R V Sbjct: 1167 KSPRCLLMSLKCGGVGLNL-CIANHVICLDLAWNAAT-----ENQAVDRAHRIGQTREVV 1220 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ L+ +NTID+ +++ + K + D + Sbjct: 1221 VHRLVVENTIDQRLMELQQQKQALSDGAMGE 1251 >gi|219115127|ref|XP_002178359.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410094|gb|EEC50024.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 535 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 57/158 (36%), Gaps = 20/158 (12%) Query: 62 IIEKANAAPIIVAYHFN-------------SDLARLQKAFPQGRTLDKDPCTIQEWN-EG 107 + + + ++ F + + +E+N Sbjct: 368 LYCEDDHTKCLIFAQFIQSLDVVEKLLFKPHIPSLKYLRLDGRVPARRRYAIAEEFNRND 427 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +I +L G GLNL G + ++F ++ + + R + G K+AV V Sbjct: 428 EIKVLLLTTRVGGLGLNLT-GADTVIFLEHDFNP-----FADLQAMDRVHRIGQKKAVCV 481 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 Y L+ ++ID+ +++ K + + ++NA + Sbjct: 482 YRLVLVDSIDQRIMKLQEKKLAMSEAIVNADNSTMFSM 519 >gi|68485451|ref|XP_713403.1| hypothetical protein CaO19.13120 [Candida albicans SC5314] gi|68485546|ref|XP_713356.1| hypothetical protein CaO19.5675 [Candida albicans SC5314] gi|46434839|gb|EAK94239.1| hypothetical protein CaO19.5675 [Candida albicans SC5314] gi|46434887|gb|EAK94286.1| hypothetical protein CaO19.13120 [Candida albicans SC5314] Length = 1102 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 25/218 (11%), Positives = 64/218 (29%), Gaps = 32/218 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----------HD 53 + + ++ + + + + + + + + Sbjct: 867 KTVKEHNMTEFLIFDMLHIQKL-EMSQVQKFCSQHYQHKIKSNQTLIREFIKRDNGFESS 925 Query: 54 EKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 KI +I + +IV F S + Sbjct: 926 AKIHKCLEMILELFSKNPGEKVIVFSQFTSLFDLMALVLQNQHIEFLRYDGTMSMDVKNN 985 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+E+ + +L + GL L N + +W+ +E + R + Sbjct: 986 VIKEFYQSSKNVLLLSLRAGNAGLTLT-CANHVFIMDPFWNP-----FVEEQAMGRAHRI 1039 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R VFV+ ++ T++ +++ +K + + L+ Sbjct: 1040 GQTREVFVHRVLIAGTVENRIMELQESKKHLIESALDE 1077 Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 49/171 (28%), Gaps = 10/171 (5%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI-----KALE 60 + Q+ L A + + ++ Q + + ++ +V D + + Sbjct: 714 RVQKAAKKILGEHTKNAP-ALTLLLRLRQACCHSYLVEIGEYRAKVKDSEAEASASNSKL 772 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 N A + + + +G + C + N L G Sbjct: 773 DWRSMLNNARNLKESVKQQVHSLIGSLNGEGNIENTPACPVCFDNIDIESSLLI----FG 828 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 ++ G FF ++ + RIG + Q K +LI Sbjct: 829 ECGHIICKGCCNTFFENCNAGDDDDESPHRIGECKDCQKTVKEHNMTEFLI 879 >gi|195341840|ref|XP_002037513.1| GM18271 [Drosophila sechellia] gi|194132363|gb|EDW53931.1| GM18271 [Drosophila sechellia] Length = 1420 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 43/118 (36%), Gaps = 7/118 (5%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + + E+N + L + G+NL G N ++ F W+ Sbjct: 825 YFRLDGSTSSQERERLVNEFNANSNVKLFLISTRAGSLGINLT-GANRVIIFDASWNP-- 881 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G + FVY ++ +++ + R K + D +++ E Sbjct: 882 ---CHDTQAVYRIYRYGQTKPCFVYRIVMDKCLEKKIYDRQIKKQGMSDRIVDECNPE 936 >gi|194743128|ref|XP_001954052.1| GF18082 [Drosophila ananassae] gi|190627089|gb|EDV42613.1| GF18082 [Drosophila ananassae] Length = 1314 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 25/186 (13%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLAR 83 ++ LQ + V + +++L+VI + Y F D+ Sbjct: 897 KLVILLRLLQQC------EAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGD 950 Query: 84 LQKAFPQGRTLDK---------DPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNI 131 + + G+ + +++N + L + G G+NL N Sbjct: 951 FKGCWTIGKDYFRLDGSCSVEQREAMCKQFNNLTNLRARLFLISTRAGGLGINLTA-ANR 1009 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +V F + W+ Q I R+ + G + ++Y LIA T+++ V +R K Sbjct: 1010 VVIFDVSWNPSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATA 1064 Query: 192 DLLLNA 197 +++ Sbjct: 1065 KRVIDE 1070 >gi|154338886|ref|XP_001565665.1| helicase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062717|emb|CAM39160.1| putative helicase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 974 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 61/176 (34%), Gaps = 20/176 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP------- 89 A + K++ L+ ++ + A ++ +F + L L+ Sbjct: 486 AAGVPMDAAHLIDPSAKMRYLDTLLPQLKAQGHRCLIFSNFTTTLDLLEAVCQLRGHSYE 545 Query: 90 ---QGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + +N L + G G+ L G + ++ F ++ + Sbjct: 546 RLDGSCNRVERELAMLRYNHPASSCFLFLVTTTAGGVGVTLT-GADTVILFDAHFNPQL- 603 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +R R + G R V VY L Q TI+E + K+ + D ++ ++ Sbjct: 604 ----DRQAADRAHRIGQTRVVRVYRLCLQGTIEEHIRDIAARKAYLGDFIVEGGQR 655 >gi|330804383|ref|XP_003290175.1| hypothetical protein DICPUDRAFT_98599 [Dictyostelium purpureum] gi|325079732|gb|EGC33319.1| hypothetical protein DICPUDRAFT_98599 [Dictyostelium purpureum] Length = 1134 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 66/232 (28%), Gaps = 45/232 (19%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y F L + + ++ + +EE E + L Sbjct: 589 IKLYQMFLESDEVKLALNKTTSP--LAALTVLKKICDHPHLLNEEMKTLSGEGEMKQFLN 646 Query: 61 VII------------------------EKANAAPIIVAYHFNSDLARLQKAFPQ------ 90 +I + +++ L + Sbjct: 647 EVIDNLSLKTLVTNSGKFQLLLKLLPNLHTDGHRLLMFSQSVKMLDDFESVLDFLKLKYL 706 Query: 91 -----GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + K I +N + GLNL + ++ F W+ Sbjct: 707 RIDGSISSTKKRQEIIDLYNTDHSYFAFIMTIQVGALGLNLTS-ADRVLIFDPSWN---- 761 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I+ V R + G KR V VY LI TI+E + ++ K ++ +LN Sbjct: 762 --TIDNQAVDRAYRIGQKRDVVVYRLITCGTIEEKIYRKQVFKGSLMKTMLN 811 >gi|297849474|ref|XP_002892618.1| hypothetical protein ARALYDRAFT_471244 [Arabidopsis lyrata subsp. lyrata] gi|297338460|gb|EFH68877.1| hypothetical protein ARALYDRAFT_471244 [Arabidopsis lyrata subsp. lyrata] Length = 1227 Score = 84.4 bits (207), Expect = 9e-15, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 51/149 (34%), Gaps = 17/149 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPL 111 + K IV + L L+ + ++++N ++ + Sbjct: 1067 LVKVVGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVRDFNTLPEVSV 1126 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLN+ + ++ LWW+ E + R + G R V V Sbjct: 1127 MIMSLKAASLGLNMVAACH-VIMLDLWWNPTT-----EDQAIDRAHRIGQTRPVKVVRFT 1180 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++T+++ +L + K + +K Sbjct: 1181 VKDTVEDRILALQQRKRMMVASAFGEHEK 1209 >gi|326478019|gb|EGE02029.1| chromatin remodeling complex subunit Chd3 [Trichophyton equinum CBS 127.97] Length = 1412 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 66/206 (32%), Gaps = 31/206 (15%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-------------VIIE 64 + E N + ++ + Y + + V+ + + Sbjct: 943 KQSERHNLNNILMQLRKCLCHPFVYSKAIEDRGVNSTLLHRNMVEASAKLQLLELLLPKL 1002 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLL-- 112 + +++ F L ++ T K I +N Sbjct: 1003 QERGHRVLIFSQFLDFLDIVEDFLDGLGLAHLRLDGSMTSLKKQKNIDAYNAPGSEYFAF 1062 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ ++ + + ++R + G K+ V V+ L+ Sbjct: 1063 LLSTRAGGVGINL-ATADTVIILDPDFNPHQ-----DIQALSRAHRIGQKKKVMVFQLMT 1116 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 + + +E ++Q + K + +L+ + Sbjct: 1117 RGSAEEKIMQIGKKKMALDHVLIERM 1142 >gi|321252272|ref|XP_003192348.1| hypothetical protein CGB_B6660W [Cryptococcus gattii WM276] gi|317458816|gb|ADV20561.1| Hypothetical protein CGB_B6660W [Cryptococcus gattii WM276] Length = 1283 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 21/151 (13%) Query: 62 IIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGK--- 108 IIE+ + IIV F + + D+ TI+ +N Sbjct: 1113 IIEQDPSQKIIVFSQFVEYIDLCSIFLRRRNIPHAKYVGSMKQDEREDTIKNFNRPMEED 1172 Query: 109 --IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 L G GLNL N ++ L W+ E V R + G R V Sbjct: 1173 KSPRCLLMSLKCGGVGLNL-CIANHVICLDLAWNAAT-----ENQAVDRAHRIGQTREVV 1226 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ L+ +NTID+ +++ + K + D + Sbjct: 1227 VHRLVVENTIDQRLMELQQQKQALSDGAMGE 1257 >gi|308497648|ref|XP_003111011.1| hypothetical protein CRE_04804 [Caenorhabditis remanei] gi|308242891|gb|EFO86843.1| hypothetical protein CRE_04804 [Caenorhabditis remanei] Length = 966 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 69/186 (37%), Gaps = 21/186 (11%) Query: 31 KCLQLANGAVYYDEEKHWKEV--HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK 86 K QL + +E+ K + L+ ++ + +++ F S L L+ Sbjct: 727 KIHQLCEKFRCTSKFLLNEELALKSGKCEQLDKMLPEIQKKGDKVLIFSQFTSMLDILEV 786 Query: 87 AFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 K I E+N + + + G G+NL N ++ Sbjct: 787 YLNIRGYSYKRLDGQTPVLDRQEMINEFNISKDLFVFLLSTKAGGLGINLTS-ANHIIIH 845 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ ++ R + G +++V V L+++ T++ +L + K ++ + Sbjct: 846 DIDFNP-----YNDKQAEDRCHRMGQEKSVHVTRLVSKCTVEIGMLALAKKKLQLEKQVT 900 Query: 196 NALKKE 201 + +K + Sbjct: 901 DGVKGQ 906 >gi|171915261|ref|ZP_02930731.1| helicase, Snf2 family protein [Verrucomicrobium spinosum DSM 4136] Length = 914 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 69/194 (35%), Gaps = 20/194 (10%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 L ++ A + AN D++ +++ L + II+ Sbjct: 587 FLSEMDLLRLQKALLMARMS--ANSTYLVDKQSPGFSSKLDRLAELLEALSAEPERKIIL 644 Query: 74 AYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 + + L ++ + + K + E+ K + + G Sbjct: 645 FTEWTTMLNLIEPILERLKMDFVRLDGQVAQKKRQALVSEFQGNPKCRVFL-TTNAGSTG 703 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNLQ + ++ L W+ +Q I R + G KR V V+ L+ + TI+E +L Sbjct: 704 LNLQA-ADTVINVDLPWNPALLEQRIAR-----AHRMGQKRKVQVHLLVTEGTIEENLLA 757 Query: 183 RLRTKSTIQDLLLN 196 L K + +L+ Sbjct: 758 TLGAKHELASAVLD 771 >gi|71995707|ref|NP_503012.2| hypothetical protein Y116A8C.13 [Caenorhabditis elegans] gi|34556097|emb|CAB55149.2| C. elegans protein Y116A8C.13a, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 833 Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 72/214 (33%), Gaps = 46/214 (21%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKE-------------------------VHDEKIKAL 59 + S QLAN + K K+ AL Sbjct: 463 ALSLIFFARQLANHPKLLLDNLREKTEKSKAHKHSPLLLAFDGAHMPRGGVKESGKLTAL 522 Query: 60 EVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE- 106 +I+ ++ ++ L +Q+ + ++ +N+ Sbjct: 523 VDMIKCFRLLQECTVIVSNYIETLDMIQQLCEYLNFKVLRLDGKTQVPDRQKLVRTFNDH 582 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G + LV F W+ QQ + RI + G R Sbjct: 583 RDPSNIFLLSTKAGGVGLNL-IGASRLVLFDSDWNPANDQQAMARIW-----RDGQVRPC 636 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +Y LI TI+E +LQR K+ + +++A++ Sbjct: 637 HIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIE 669 >gi|156036384|ref|XP_001586303.1| hypothetical protein SS1G_12881 [Sclerotinia sclerotiorum 1980] gi|154698286|gb|EDN98024.1| hypothetical protein SS1G_12881 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1207 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR----------LQK 86 + + K + K+ AL ++ K N +++ F+ L Sbjct: 952 CIKSFDVKKNAWMDSGKVSALVELVTKYKENGDRVLIFSQFSLVLDILESVLNTTKITYT 1011 Query: 87 AFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +D+ I+ + + I + G G+NL Y N ++ F ++ ++ Sbjct: 1012 RIDGSTKIDERQAYIERFRDDADITAFLLTTKAGGTGINLMY-ANKVIIFDGSFNPQD-- 1068 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + R + G R V V L+ + TI+E + + R+K + + Sbjct: 1069 ---DVQAENRAHRVGQTRDVEVVRLVTKGTIEEAIWKMGRSKLMLDGRV 1114 >gi|326427538|gb|EGD73108.1| nucleotide excision repair protein [Salpingoeca sp. ATCC 50818] Length = 865 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 54/160 (33%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQG----------RTLDKD 97 KI+AL + + I+ F L L+ +G + Sbjct: 692 SSTKIEALLEELTALQSDTHCIKSIIFSQFTQFLDLLEWRLQRGGIRCVKLDGRMSPASR 751 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I +N + +I + + G LNL + + WW+ E + R Sbjct: 752 AAVIDAFNTKPEITVFLISLKAGGLALNLTA-ASRVYITDPWWNP-----CAEAQAMDRI 805 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V LI +N+I+ + Q K + + + Sbjct: 806 HRLGQNRPVEVRRLIIENSIESRIDQLQEKKRLLFESTVG 845 >gi|325188450|emb|CCA22986.1| hypothetical protein SELMODRAFT_450747 [Albugo laibachii Nc14] Length = 1623 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 67/168 (39%), Gaps = 19/168 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 +K + K++ L V++ + ++ S L L++ Sbjct: 869 MSFPDKKLVQFDCGKLQELAVLLCRLRREGHRCLIFTQMTSMLNILEQFLNLHGHTYFRL 928 Query: 96 -------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 K ++++N + I S G G+NL G + ++F+ W+ Sbjct: 929 DGSTRVEKRQMLMEKFNQDSSIFCFILSTRSGGLGINLT-GADTVIFYDSDWNPA----- 982 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ R + G R V +Y L+ +T+++ +L++ + K ++ L++ Sbjct: 983 MDAQAQDRAHRIGQTREVHIYRLVTLSTVEDNILRKAQQKRNLETLVM 1030 >gi|145348183|ref|XP_001418535.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578764|gb|ABO96828.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1326 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 24/229 (10%), Positives = 68/229 (29%), Gaps = 43/229 (18%) Query: 4 YHKF-QRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD-------- 53 Y + +++ L+G + + +++ ++ N D + Sbjct: 546 YRALYENQIHVLLEGSKVKSVPQLRNLSMELRKVCNHPFLCDGLEEDYTNKRLAACAEKG 605 Query: 54 EKIKALEVIIEK----------------ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 ++ ++ + + +++ F L +Q + Sbjct: 606 DQPPNALQLLVEGSGKMGLLAKLLAKLKRDGHKVLIFSQFTMVLDLIQDFMNASGHETER 665 Query: 98 ----------PCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +N + G G+ L + + F W+ + Sbjct: 666 LDGNTSAENRQAGIDRFNTPGAGFAYLLSTRAGGMGITLTS-ADTAIIFDSDWNPQN--- 721 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + + R + G + V VY I ++T ++ + + K + + +L Sbjct: 722 --DLQAMARCHRIGQTKEVKVYRFITKDTYEQSLFETASRKYGLDEAIL 768 >gi|145496081|ref|XP_001434032.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124401154|emb|CAK66635.1| unnamed protein product [Paramecium tetraurelia] Length = 1103 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 52/137 (37%), Gaps = 6/137 (4%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +I + I+ + + Q + D+ + KI Sbjct: 881 WRVLIFCQMTRMLDILEEYMLHKGYTYFRMDGQCQINDRRDMVNEFQQNDKIFAFLLSTR 940 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+ L + ++F+ W+ ++ R + G + V+VY LI + TI+ Sbjct: 941 AGGLGITLTQ-ADAVIFYDNDWNPT-----MDAQATDRAHRIGRTKDVYVYRLITKGTIE 994 Query: 178 ELVLQRLRTKSTIQDLL 194 E +++R + K +Q + Sbjct: 995 ERIVKRAQQKQNVQSTV 1011 >gi|332024392|gb|EGI64590.1| TATA-binding protein-associated factor 172 [Acromyrmex echinatior] Length = 1888 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 7/120 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + +N + I +L G GLNL G + ++F Sbjct: 1695 THLPTVTYLRLDGSVPAAHRHSVVTRFNADPSIDVLLLTTQVGGLGLNLT-GADTVIFVE 1753 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY LI ++T++E ++ + K + +++ Sbjct: 1754 HDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRSTVEEKIMGLQKFKLLTANTIIS 1808 >gi|290998113|ref|XP_002681625.1| predicted protein [Naegleria gruberi] gi|284095250|gb|EFC48881.1| predicted protein [Naegleria gruberi] Length = 489 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEKAN-AAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPC 99 KI AL + +V + S L + + + D+D Sbjct: 251 SSSKIGALIEKLRVLELGTKSVVFSQWTSMLDLVEVALEKSNIKFVRLDGKMQRKDRDDA 310 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + I + G GLNL + + WW+ IE + R + Sbjct: 311 VQKFKFDPHIQVCLISLKVGGTGLNLVW-ATHVFLLDPWWNPA-----IEEQAIDRVHRI 364 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V V+ + +++++E +L ++K+ I + LN Sbjct: 365 GQDKPVTVFRFVVKDSVEERILSLQKSKTKIANEALN 401 >gi|289613402|emb|CBI59655.1| unnamed protein product [Sordaria macrospora] Length = 1346 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 31/195 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEK--ANAAPIIVAY 75 ++ + Y + + + K+ LEV++ K +++ Sbjct: 795 LMQLRKCLCHPFVYSQSIEDRNLSPEVSKRNLVEASSKLLLLEVMLPKLRERGHRVLMFS 854 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F L L+ + I +N L + G G+ Sbjct: 855 QFLDQLTILEDFLASMNLPYERLDGSHSGMEKQKRIDAFNAPDSKLFCMLLSTRAGGVGI 914 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ W+ + + ++R + G ++ V + L+ ++ +E +LQ Sbjct: 915 NL-ATADTVIILDPDWNPHQ-----DIQALSRAHRIGQQKKVLCFQLMTVDSAEEKILQI 968 Query: 184 LRTKSTIQDLLLNAL 198 R K + LL+ + Sbjct: 969 GRKKMALDHLLIETM 983 >gi|145338703|ref|NP_188552.3| ATRAD54 (ARABIDOPSIS HOMOLOG OF RAD54); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|112419506|dbj|BAF03042.1| Rad54 [Arabidopsis thaliana] gi|116518260|gb|ABJ99465.1| RAD54-like protein [Arabidopsis thaliana] Length = 910 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 70/234 (29%), Gaps = 58/234 (24%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE------------------------ 44 + D + + +L N + Sbjct: 460 KRALADNAKQT----KVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMF 515 Query: 45 ----------EKHWKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 + W E+ + ++ + + I++ ++ L + + Sbjct: 516 SGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERR 575 Query: 91 --------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 T+ K + N+ + G GLNL G N LV F W+ Sbjct: 576 YPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNL-IGANRLVLFDPDWN 634 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G K+ V+VY ++ TI+E V QR +K +Q ++ Sbjct: 635 PAN-----DKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 683 >gi|71754507|ref|XP_828168.1| DNA repair protein [Trypanosoma brucei TREU927] gi|70833554|gb|EAN79056.1| DNA repair protein, putative [Trypanosoma brucei] Length = 984 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 18/161 (11%) Query: 49 KEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 K + K+ A+ I +IV F L +Q + L + Sbjct: 811 KPLRGTKLDAITEYICSIPEEEKVIVFSQFGDTLDLIQLWLQKVKVKTVKLVGSLMLSQR 870 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + ++ + + + G GLNLQ N +V WW+ R Sbjct: 871 QAVLRAFLHDKSVRAILISLKAGGEGLNLQ-IANHVVLVDPWWNPAVEM-----QAAQRA 924 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V + + +++E +L+ K + + ++ Sbjct: 925 HRIGQTRPVRVVRFVTERSVEERMLELQEKKMLVIEGTIDG 965 >gi|299470303|emb|CBN78353.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1972 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 21/201 (10%), Positives = 61/201 (30%), Gaps = 31/201 (15%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DEKI 56 + E+ ++ E+ + V + N + + K+ Sbjct: 1218 EDEMAAVVKREDEHYQKLMTLLVHLRKACNHPHMLVDVERSVGETESQTVDYTVAASGKL 1277 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEW 104 L+ ++ + ++ F S L LQ + + Sbjct: 1278 ALLDRMLPRLQAKGHRCLILSQFASMLDILQDLCLARGYEHGRLDESTSSPQTRLDARRF 1337 Query: 105 NEGKIPL---LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N + + L + G + ++ + W+ + ++ + R + G Sbjct: 1338 NAPESKVSVLLVPTRMTGASGGLNLTAADTVILYDSHWNPQ-----VDLQAIERVHRIGQ 1392 Query: 162 KRAVFVYYLIAQNTIDELVLQ 182 + V V+ L+ + +++E ++ Sbjct: 1393 SKPVKVFRLLCRRSVEERIVA 1413 >gi|294659015|ref|XP_002770883.1| DEHA2F23188p [Debaryomyces hansenii CBS767] gi|218511864|sp|Q6BKC2|SWR1_DEBHA RecName: Full=Helicase SWR1 gi|202953552|emb|CAR66400.1| DEHA2F23188p [Debaryomyces hansenii] Length = 1616 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 68/170 (40%), Gaps = 19/170 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQG 91 +K + K++ L +++ AN ++ L + G Sbjct: 1321 FPDKSLLQFDCGKLQKLATLLQDLTANGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDG 1380 Query: 92 RTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +D + + + KIP+ S G G+NL G + ++F+ W+ ++ Sbjct: 1381 ATKIEDRQLLTEKFNRDSKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPA-----MD 1434 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G R V +Y +++ TI+ +L++ K + ++++ + Sbjct: 1435 KQCQDRCHRIGQSRDVHIYRFVSEYTIESNILRKANQKRQLDNVVIQEGE 1484 >gi|83770096|dbj|BAE60231.1| unnamed protein product [Aspergillus oryzae] Length = 777 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I + N + Sbjct: 615 KLRSKKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQRQKSIDFFMNNVDV 674 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 675 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 728 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + +N + E + Sbjct: 729 LCIEDSVESRIVLLQEKKANLINGTINKDQGEALE 763 >gi|224013540|ref|XP_002296434.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220968786|gb|EED87130.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1089 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 29/216 (13%), Positives = 67/216 (31%), Gaps = 31/216 (14%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y + + + + + +L +++ D+ + Sbjct: 653 ELYREISNRASRSIGSIRGRDDNDTPLTLLTEVRKLCTHPSLLNKDDSSLSASDDASLSG 712 Query: 60 EVII---------EKANAAPIIVAYHFNSDL-----------ARLQKAFPQGRTLDKDPC 99 ++I+ E +I+ +F + L Sbjct: 713 KLIVLSSLIESIREHHPTDKVIITSNFTTALTVVENSILRKKNLPFIRLDGSVDNASRQP 772 Query: 100 TIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + + G GLNL G N L+ W+ QQ++ R+ Sbjct: 773 IVDSFNNNSVNHSFAFTLSSKAGGCGLNL-IGANRLIMVDADWNPATDQQVMARV----- 826 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G K+ ++Y + T++E++ QR K + Sbjct: 827 YRQGQKKPCYIYRMFTTGTVEEVIFQRQTQKGNLAK 862 >gi|317138165|ref|XP_001816719.2| chromatin remodeling complex subunit (Chd3) [Aspergillus oryzae RIB40] Length = 1230 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 70/209 (33%), Gaps = 31/209 (14%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYD---EEKHWKEVHDEK----------IKALEVIIE 64 + E N + ++ + Y EE+ K + L + Sbjct: 676 KQAERQNLNNILMQLRKCLCHPFIYSTAIEERTNNATASHKHLVEAAGKLQLLQLMLPKL 735 Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL-- 112 + +++ F +L ++ + + I ++N P Sbjct: 736 RERGHRVLIFSQFLDNLDIVEDFLDGLGLLHCRLDGRMSSLEKQKMIDQYNAQDSPYFAF 795 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G G+NL + ++ ++ + ++R + G K V V+ L+ Sbjct: 796 LLSTRSGGVGINL-ATADTVIIMDPDFNPHQDM-----QALSRAHRIGQKNKVLVFQLMT 849 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + +E ++Q + K + +L++ + E Sbjct: 850 RGSAEEKIMQIGKKKMVLDHVLIDRMVSE 878 >gi|301096537|ref|XP_002897365.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262107056|gb|EEY65108.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 612 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 8/119 (6%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K IQ + P+ L + G+NL N LV F + W+ Sbjct: 417 WFLQIDGSTHGSKRMEYIQRFTSPDSPVKLLLVSTRAGAEGINLHA-ANRLVLFDVSWNP 475 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + + R + G + V VY L++ T++ + ++ K + ++++ ++ Sbjct: 476 SN-----DHQSMCRSHRIGQAKTVHVYRLVSTGTMERRIYEQQMKKVDLSTSVVDSHER 529 >gi|115734945|ref|XP_001199537.1| PREDICTED: similar to HELLS protein, partial [Strongylocentrotus purpuratus] gi|115902055|ref|XP_792190.2| PREDICTED: similar to HELLS protein, partial [Strongylocentrotus purpuratus] Length = 132 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 51/121 (42%), Gaps = 7/121 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F + +L+ ++E+N + L + G G+NL + ++ + Sbjct: 17 FCHMRSHQYCRLDGTTSLEDRQERMKEFNSNPDVFLFLLSTRAGGLGINLTA-ADTVIIY 75 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + + R + G + V +Y L+ NTID+ +++R K ++ +++ Sbjct: 76 DSDWNPQS-----DLQAQDRCHRIGQTKPVVIYRLVTANTIDQRIVERAAAKRKLEKMVI 130 Query: 196 N 196 + Sbjct: 131 H 131 >gi|17540630|ref|NP_502137.1| hypothetical protein F54E12.2 [Caenorhabditis elegans] gi|3873712|emb|CAA97421.1| C. elegans protein F54E12.2, partially confirmed by transcript evidence [Caenorhabditis elegans] gi|3877578|emb|CAB05213.1| C. elegans protein F54E12.2, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1091 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCT 100 KIK I+ +++ + S L ++ Sbjct: 916 SCKIKNTLEIVENIMEKKEKVVIVSQWTSVLNLIEIHIKSSGFKYTSITGQVLVKDRQER 975 Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N +G ++ A+ G GLNL GGN LV L W+ QQ +RI + Sbjct: 976 VDSFNREKGGARVMLLSLAAGGVGLNLT-GGNHLVMVDLHWNPALEQQAFDRI-----YR 1029 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ VF++ L+ + TI++ V+ + K + +L+ Sbjct: 1030 MGQKKDVFIHRLVTKGTIEQRVVMLQKDKVALASSVLDG 1068 >gi|320162753|gb|EFW39652.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864] Length = 1169 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 14/147 (9%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE--GKIP 110 +++ + I+V + S L L+ A + I+E+ + Sbjct: 1002 LKEDPSLKILVFSQWTSMLDLLEPALQEAHIFFSRFDGSMSMREKDNVIREFGHLRSQTR 1061 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ GLNL + + W M E + R + G R V V L Sbjct: 1062 VMLCSLKCTSMGLNLT-MASRVFIVGTWTAP-WWNPMQEEQAIDRVHRIGQMREVIVERL 1119 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +T++E VL + K + + +L+ Sbjct: 1120 VIPDTVEERVLLLQQNKQMLANAVLDE 1146 >gi|312374254|gb|EFR21844.1| hypothetical protein AND_16270 [Anopheles darlingi] Length = 476 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 63/186 (33%), Gaps = 28/186 (15%) Query: 32 CLQLANGAVYYDEEKHW--------KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 Q+A + + K+ L+ ++ K + +++ F + L Sbjct: 189 LRQVALHPFLIPSTESTDSSLVTPEIVSYSPKMIVLDALLAKLFERGSRVLIFSQFVTML 248 Query: 82 ARL----------QKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGG 129 L I ++N K + + G G+NL + Sbjct: 249 QILADYLDWRGYNYCMLDGSSDFADRKEQIDDFNRPKSDRFVFLLSTRAGGLGINL-FTA 307 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F+ + ++ + ++ R + G K V + +I + TIDE + K Sbjct: 308 DTVIFYDMDYNPQ-----MDYQAEDRAHRIGQKHQVHIIRMIVRGTIDESLHAITEQKKQ 362 Query: 190 IQDLLL 195 + + ++ Sbjct: 363 LDESII 368 >gi|242208815|ref|XP_002470257.1| predicted protein [Postia placenta Mad-698-R] gi|220730707|gb|EED84560.1| predicted protein [Postia placenta Mad-698-R] Length = 813 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 70/198 (35%), Gaps = 22/198 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 +R E++E A QL Y + + + K+ + A Sbjct: 596 RRGAVFRFVKEDMEVMTDAEL-----QLFCATKYLQPDDCYLQAGKVKVLLQLLERYHAE 650 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEGK-IPLLFAHP 116 +++ F L LQK + + E+ + + I + Sbjct: 651 GRRVLIFSQFTQILDILQKVLEKEGIRFSLLTGATPVDARQSLVDEFTDDESISVFLLST 710 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL ++++ F ++ ++ R + G K+ V V LI + +I Sbjct: 711 KAGGMGINLTA-ASVVIMFDQDFNP-----HNDKQAQDRAYRIGQKQDVDVVKLITKGSI 764 Query: 177 DELVLQRLRTKSTIQDLL 194 +E +L +TK + + + Sbjct: 765 EEDMLALGQTKLALDEAV 782 >gi|241707025|ref|XP_002412008.1| steroid receptor-interacting snf2 domain protein, putative [Ixodes scapularis] gi|215505018|gb|EEC14512.1| steroid receptor-interacting snf2 domain protein, putative [Ixodes scapularis] Length = 1055 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 7/122 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R + + I E+N + L + G+NL G N +V W Sbjct: 631 RGRNYFRLDGSTSAQEREKLINEYNANAGVSLFLLSTRAGCLGINLT-GANRIVVLDASW 689 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + V R + G + +Y L+ N +++ + R K + D +++ + Sbjct: 690 NP-----CHDAQAVCRIYRYGQAKPCHIYRLVCDNCLEKRIYDRQVNKQGMSDRVVDEMN 744 Query: 200 KE 201 E Sbjct: 745 PE 746 >gi|67528132|ref|XP_661876.1| hypothetical protein AN4272.2 [Aspergillus nidulans FGSC A4] gi|40739750|gb|EAA58940.1| hypothetical protein AN4272.2 [Aspergillus nidulans FGSC A4] gi|259481113|tpe|CBF74347.1| TPA: DNA excision repair protein Rad16, putative (AFU_orthologue; AFUA_7G03820) [Aspergillus nidulans FGSC A4] Length = 849 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ + + +I + N + Sbjct: 687 KLRSKKQTLKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMSPAQRQKSIDYFMNNVNV 746 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 747 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 800 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + +N + E + Sbjct: 801 LCIEDSVESRIVMLQEKKANMINGTINKDQGEALE 835 >gi|320580465|gb|EFW94687.1| hypothetical protein HPODL_3059 [Pichia angusta DL-1] Length = 1575 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 20/161 (12%) Query: 51 VHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 KI+AL + K IV F S L ++ + T + Sbjct: 1400 KSSTKIEALMEELYKSRSDRQTVKSIVFSQFTSMLDLVEWRLKRAGFSIAKLQGSMTPIQ 1459 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 IQ + + + + G LNL N + WW+ R Sbjct: 1460 RDSVIQHFMTNPSVEVFLVSLKAGGVALNL-VEANQVFILDSWWNPALDTG----QAADR 1514 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R + + L+ +++I+ +++ + K+ + L+ Sbjct: 1515 IHRIGQHRPIRIVKLVIEDSIESRIIELQQKKADMVKATLD 1555 >gi|321265109|ref|XP_003197271.1| DEAD/DEAH box helicase involved in nucleotide-excision repair [Cryptococcus gattii WM276] gi|317463750|gb|ADV25484.1| DEAD/DEAH box helicase involved in nucleotide-excision repair, putative [Cryptococcus gattii WM276] Length = 804 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 22/167 (13%) Query: 53 DEKIKALEVIIEKA-----NAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDK 96 KI+ L ++ + N IV F S L + R + Sbjct: 621 SAKIRMLLKLLSEIDEKSGNKEKTIVFSQFTSFLDLVEPYLKKYSIKYVRYDGSMRNDHR 680 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ K ++ + GLNL N ++ LWW+ E R Sbjct: 681 QESLAKIRDDSKTRVILISFKAGSTGLNLT-CCNNVILMDLWWNPAL-----EDQAFDRA 734 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G K V ++ L + T+++ +L +K + + L+ + + Sbjct: 735 HRLGQKLDVNIWKLTIEETVEDRILILQNSKRDLANAALSGQTGKGV 781 >gi|162464313|ref|NP_001105087.1| chromatin complex subunit A101 [Zea mays] gi|18463957|gb|AAL73042.1|AF461813_1 chromatin complex subunit A101 [Zea mays] Length = 779 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 67/192 (34%), Gaps = 29/192 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH---------DEKIKALEVIIE--KANAAPIIVAYH 76 ++ + N + ++ K + + ++ A ++V Sbjct: 500 LMIQLRKNCNHPDLLESPVDSTGLYPPVEKLLEQCGKFQLFDRLLNFLMAQKHKVLVFSQ 559 Query: 77 FNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLN 124 + L ++ L++ I E+N+ + + + G G+N Sbjct: 560 WTKVLDIIEYYLDSKGHAVCRIDGNVKLEERRRQIAEFNDVNSSMRIFLLSTRAGGLGIN 619 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + + + W+ + ++ + R + G R V VY L ++++ +++R Sbjct: 620 LTA-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTRPVHVYRLATSHSVEGRMIKRA 673 Query: 185 RTKSTIQDLLLN 196 K ++ +++ Sbjct: 674 FGKLKLEHVVIG 685 >gi|164448642|ref|NP_001106734.1| chromodomain-helicase-DNA-binding protein 1 [Bombyx mori] gi|269969346|sp|A9X4T1|CHD1_BOMMO RecName: Full=Chromodomain-helicase-DNA-binding protein 1; Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1 gi|89213694|gb|ABD64154.1| CHD1 [Bombyx mori] Length = 1365 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 70/224 (31%), Gaps = 40/224 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y ++ ++G N ++ + N A+ E A+E Sbjct: 456 KNYSALRKG----VKGSINTFINI---VIELKKCCNHALLTKPEDFESRASLATSDAVEK 508 Query: 62 IIE---------------KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 ++ K +++ L L + + + Sbjct: 509 LLRGSGKLLLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGEL 568 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + ++ F W+ + + Sbjct: 569 RKQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQA 622 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 623 RAHRIGQKNQVNIYRLVTARSVEEDIVERAKRKMVLDHLVIQRM 666 >gi|309366189|emb|CAP21805.2| hypothetical protein CBG_00336 [Caenorhabditis briggsae AF16] Length = 1062 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 73/198 (36%), Gaps = 22/198 (11%) Query: 5 HKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ L +A ++ K LA+ + + V I+ L++I Sbjct: 625 KQAQKHTALLLAFDGPNMPRGAAKESGKLYALADMLKCFRMLQECTVVVSNYIETLDMI- 683 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGH 121 + F D + ++ +N+ + + G Sbjct: 684 --EQLCAYLEFRVFRLDGK---------TQVQDRQKLVRNFNDQRDPSNIFLLSTKAGGV 732 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL G + LV F W+ QQ + RI + G R +Y LI TI+E +L Sbjct: 733 GLNL-IGASRLVLFDSDWNPANDQQAMARIW-----RDGQVRPCHIYRLITTGTIEEKML 786 Query: 182 QRLRTKSTIQDLLLNALK 199 QR K+ + +++A++ Sbjct: 787 QRQIKKTGL-GCVIDAIE 803 >gi|189197045|ref|XP_001934860.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980808|gb|EDU47434.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1022 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 22/177 (12%), Positives = 53/177 (29%), Gaps = 21/177 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 Y + KI ++ + ++ F S L ++ + + Sbjct: 834 YMRRLDKTYIPSAKISRTIELLNEIRENDPTEKTLIFSQFTSLLDLVEVPLWREGIKYQR 893 Query: 98 -----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ + GLNL + ++ +W+ Sbjct: 894 YDGSMKMDDRAEAVNLFMDNPNQNVMLVSIKAGNAGLNLWK-ASQVIILDPFWNP----- 947 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 IE V R + R V V+ ++ T+++ ++ K I L+ + + Sbjct: 948 FIEEQAVDRAHRMPQTREVHVHRILVPETVEDRIVLLQDKKREIIGDALDENASKRL 1004 Score = 39.3 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 3/53 (5%), Positives = 10/53 (18%), Gaps = 7/53 (13%) Query: 3 QYHKFQRELYCDLQ-------GENIEAFNSASKTVKCLQLANGAVYYDEEKHW 48 Y + + + G + ++ Q + Sbjct: 572 IYKALEDKSQIFINKYLERGRGSTTNYASVLVVLLRLRQACCHPHLIKDLSQP 624 >gi|119192342|ref|XP_001246777.1| hypothetical protein CIMG_00548 [Coccidioides immitis RS] Length = 1432 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 32/235 (13%), Positives = 75/235 (31%), Gaps = 41/235 (17%) Query: 2 KQYH-------KFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV 51 K Y + + ++ G + E N + V+ + Y + + V Sbjct: 834 KLYKSILAKNPQLIKAIFKKTDGRSLKQSERHNLNNILVQLRKCLCHPFVYSKAIEERGV 893 Query: 52 HDEKIKALE-------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 D + + + +++ F L ++ Sbjct: 894 SDTLLYRNLVEASSKLQLLELLLPKLQERGHRVLLFSQFLDFLDIIEDFLDGLGVLHLRL 953 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + I E+N P + + G G+NL + ++ ++ + Sbjct: 954 DGSLSSLQKQKRIDEFNAPNSPYFVFMLSTRAGGVGINL-ATADTVIIMDPDFNPHQ--- 1009 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + ++R + G R V V+ L+ + T +E ++Q R K + L+ + E Sbjct: 1010 --DIQALSRAHRIGQHRKVLVFQLMTKGTAEEKIIQIGRKKMALDQALIGFMDME 1062 >gi|224094755|ref|XP_002310223.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222853126|gb|EEE90673.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 754 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 70/215 (32%), Gaps = 29/215 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA---------VYYDEEKHWKEVHDEK 55 + L + + V+ + Y+ K Sbjct: 449 KTLEGYLREKMDTGRGMKGRLTNLMVQLRKNCYHPDLLESAFDGSYFYPPVEQIVEQCGK 508 Query: 56 IKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQE 103 + L+ ++ + +++ + L + F LD+ I+E Sbjct: 509 FRLLDKLLNRLFALKHKVLIFSQWTKVLDIMDYYFSEKGFEVCRIDGSVNLDERKRQIEE 568 Query: 104 WNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N+ + + G G+NL + + + W+ + ++ + R + G Sbjct: 569 FNDENSQYRVFLLSTRAGGLGINLTS-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQ 622 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V VY L +I+ +L+R +K ++ +++ Sbjct: 623 TKPVHVYRLATAQSIEGRILKRAFSKLKLEHVVIG 657 >gi|171681928|ref|XP_001905907.1| hypothetical protein [Podospora anserina S mat+] gi|170940923|emb|CAP66573.1| unnamed protein product [Podospora anserina S mat+] Length = 1119 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 56/164 (34%), Gaps = 20/164 (12%) Query: 53 DEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQK------------AFPQGRTLDKDPC 99 KI+ L I+ +A+ IV F S L ++ + ++ Sbjct: 898 SAKIRELLSILRKEAHEHKFIVFSQFTSMLDLIEPFLRSQPGMKAVRYDGKMPNDAREAA 957 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +L GLNL ++ +W+ +E + R + Sbjct: 958 LKALRTDPHTRILLCSLKCGSLGLNLTA-ATRVIIVEPFWNP-----FVEEQAIDRVHRL 1011 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKET 202 V VY L Q+T++ +L+ K + + + ++K+ Sbjct: 1012 TQTVDVIVYKLTVQDTVEARILELQNKKRMLAEATIEGGMRKKG 1055 Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 12/41 (29%), Gaps = 3/41 (7%) Query: 4 YHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVY 41 Y + + + I+ N+ ++ Q N Sbjct: 565 YDALEARADKSLEKMMKGRIDYANALVLLLRLRQACNHPRL 605 >gi|74694070|sp|Q759G7|SWR1_ASHGO RecName: Full=Helicase SWR1 Length = 1486 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 65/177 (36%), Gaps = 11/177 (6%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + A LQ G + + K + +I + + F + Sbjct: 1200 TKLSIAFPDKSLLQYDCGKLQ----SLAVLLRRLKEEGHRALIFTQMTKVLDILEQFLNY 1255 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 L ++ + +N + +I + S G G+NL G + ++F+ W Sbjct: 1256 HGYLYMRLDGATKIEDRQILTERFNTDPRITVFILSSRSGGLGINLT-GADTVIFYDSDW 1314 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + +++ R + G R V +Y +++TI+ +L++ K + ++++ Sbjct: 1315 NPA-----MDKQCQDRCHRIGQTRDVHIYRFASEHTIESNILKKANQKRQLDNIVIQ 1366 >gi|195489519|ref|XP_002092773.1| GE11484 [Drosophila yakuba] gi|194178874|gb|EDW92485.1| GE11484 [Drosophila yakuba] Length = 1671 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 7/118 (5%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + + E+N G + L + G+NL G N ++ F W+ Sbjct: 1005 YFRLDGSTSSQERERLVNEFNANGNVKLFLISTRAGSLGINLT-GANRVIIFDASWNP-- 1061 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G + FVY ++ +++ + R K + D +++ E Sbjct: 1062 ---CHDTQAVYRIYRYGQTKPCFVYRIVMDRCLEKKIYDRQIKKQGMSDRIVDECNPE 1116 >gi|149030549|gb|EDL85586.1| chromodomain helicase DNA binding protein 1-like (predicted) [Rattus norvegicus] Length = 530 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 50/121 (41%), Gaps = 6/121 (4%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + ++ I+ + + I + + G G+NL + ++F Sbjct: 11 YMDYRGYSYERVDGSVRGEERHLAIKNFGKQPIFVFLLSTRAGGVGMNLTA-ADTVIFVD 69 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ + + R + G ++V V LI ++T++E+V ++ +K + ++++ Sbjct: 70 SDFNPQN-----DLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVIE 124 Query: 197 A 197 Sbjct: 125 G 125 >gi|115389076|ref|XP_001212043.1| DNA repair protein RAD16 [Aspergillus terreus NIH2624] gi|114194439|gb|EAU36139.1| DNA repair protein RAD16 [Aspergillus terreus NIH2624] Length = 963 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 51/155 (32%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I + + Sbjct: 801 KLRSKKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQRQKSIDYFMKNVDV 860 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 861 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 914 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + +N + E + Sbjct: 915 LCIEDSVESRIVLLQEKKANLINGTINKDQGEALE 949 >gi|47459148|ref|YP_016010.1| SWF/SNF family helicase [Mycoplasma mobile 163K] gi|47458477|gb|AAT27799.1| swf/snf family helicase-like protein [Mycoplasma mobile 163K] Length = 958 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 70/185 (37%), Gaps = 23/185 (12%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 +A+ K K EK+ +I+ +++ F ++ Sbjct: 766 VLKAINHLKIIASSPF----VKSDKFDTSEKLNYCINLIKSIKLLKQKVLIFTQFTKNIP 821 Query: 83 RLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNI 131 +K F + + + +NE I +L + GLNL N Sbjct: 822 FFEKNFIKSNIKYDIISGKTNKKERFKITEYFNESSDIDVLIISLRAGSLGLNLTS-ANN 880 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + +WW+ Q +E + R + G KR V V+ LI ++TI+E V + K I Sbjct: 881 VILYDIWWN-----QSVESQAIDRVHRIGQKRGVNVFKLIMKDTIEEKVFELQSQKQKII 935 Query: 192 DLLLN 196 D++L Sbjct: 936 DIVLE 940 >gi|309357491|emb|CAP35854.2| hypothetical protein CBG_18388 [Caenorhabditis briggsae AF16] Length = 995 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 69/186 (37%), Gaps = 21/186 (11%) Query: 31 KCLQLANGAVYYDEEKHWKEV--HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQK 86 K QL + +E+ + K + L+ ++ + +++ F S L L+ Sbjct: 745 KIHQLCERFRCTSKFLLNEELALNSGKCEQLDKMLPEIQNKGDKVLIFSQFTSMLDILEV 804 Query: 87 AFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 K I E+N + + + G G+NL N ++ Sbjct: 805 YLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTKAGGLGINLTS-ANHIIIH 863 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ ++ R + G ++ V V L+++ T++ +L + K ++ + Sbjct: 864 DIDFNP-----YNDKQAEDRCHRMGQEKPVHVTRLVSKCTVEIGMLALAKKKLQLEKQVT 918 Query: 196 NALKKE 201 + +K + Sbjct: 919 DGVKGQ 924 >gi|310791236|gb|EFQ26765.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1012 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 57/171 (33%), Gaps = 21/171 (12%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR-------------LQK 86 Y + + K +A ++ K I+ + L + Sbjct: 828 YTKYLSHHWLASSKTRACMDLLRKIQETGEKTIIFSQWTMLLDLLQVAIKKEGLGIKHCR 887 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +D + + ++ + GLNL + ++ +W+ Sbjct: 888 YTGEMSMAQRDDTAFTFSTDADMKVMMVSLRAGNAGLNLVS-ASRVIIMDPFWNP----- 941 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 IE V R + G ++ V V+ ++ Q T+++ ++Q K D L+ Sbjct: 942 YIEMQAVDRAHRIGQQKPVKVHRILTQETVEDRIVQLQEKKRATVDAALDE 992 >gi|302794729|ref|XP_002979128.1| hypothetical protein SELMODRAFT_110695 [Selaginella moellendorffii] gi|300152896|gb|EFJ19536.1| hypothetical protein SELMODRAFT_110695 [Selaginella moellendorffii] Length = 851 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 61/168 (36%), Gaps = 23/168 (13%) Query: 51 VHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 KI AL ++EK +V F++ L ++ + G + K Sbjct: 674 KPSAKINALISMLEKTRAKDPNIKSVVFSQFSTMLKLIEGPLQKAGFKFVKLEGGMSASK 733 Query: 97 DPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + G + + G GLNL + + WW+ +E + Sbjct: 734 REENMEAFKSTRSGSPTVFLLSLKAAGVGLNLVT-ASNVFMMDPWWNPA-----VEEQAM 787 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R V V+ LIA ++I+E +LQ K + L E Sbjct: 788 DRVHRLGQTRDVHVFRLIATDSIEERLLQVQEKKRAYAQIALGKEASE 835 Score = 35.5 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 4/47 (8%), Positives = 13/47 (27%), Gaps = 6/47 (12%) Query: 3 QYHKFQRELY----CDLQGENIEAFNS--ASKTVKCLQLANGAVYYD 43 Y K +++ L + + ++ Q+ + Sbjct: 513 LYDKMEKDGRNMIRRFLDNGTVTKNYAVVLQMILRLRQICDHTSMCP 559 >gi|242047292|ref|XP_002461392.1| hypothetical protein SORBIDRAFT_02g001960 [Sorghum bicolor] gi|241924769|gb|EER97913.1| hypothetical protein SORBIDRAFT_02g001960 [Sorghum bicolor] Length = 778 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 21/192 (10%), Positives = 67/192 (34%), Gaps = 29/192 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH---------DEKIKALEVIIEK--ANAAPIIVAYH 76 ++ + N + + ++ K + + ++ ++V Sbjct: 503 LMIQLRKNCNHPDLLEAQVDSIGLYPPVEKILEQCGKFQLFDRLLNYLIEQKHKVLVFSQ 562 Query: 77 FNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLN 124 + L ++ L++ I E+N+ + + + G G+N Sbjct: 563 WTKVLDIIEYYLDSKGHDVCRIDGSVKLEERRRQIAEFNDLNSSMRIFLLSTRAGGLGIN 622 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + + + W+ + ++ + R + G R V VY L ++++ ++++ Sbjct: 623 LTS-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTRPVHVYRLATSHSVEGRIIKKA 676 Query: 185 RTKSTIQDLLLN 196 K ++ +++ Sbjct: 677 FGKLKLEHVVIG 688 >gi|149537776|ref|XP_001520060.1| PREDICTED: similar to chromodomain helicase DNA binding protein 5, partial [Ornithorhynchus anatinus] Length = 1799 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 22/217 (10%), Positives = 60/217 (27%), Gaps = 41/217 (18%) Query: 6 KFQRELYCDL---------QGENIEAFNSASKTVKCLQLANGAVYYD------------- 43 + Q++L+ + + + + + N + Sbjct: 682 QMQKKLWLFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGS 741 Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 + K+ L+ +++K +++ L L+ + Sbjct: 742 YDGSSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGG 801 Query: 98 ------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + G G+NL + ++ + W+ Q Sbjct: 802 ITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNPHNDIQ--- 857 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + G + V +Y + Q +++E + Q Sbjct: 858 -VSLNHTHSIGQNKNVMIYRFLTQASVEERITQIQDN 893 >gi|118089323|ref|XP_420137.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 1204 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 64/246 (26%), Gaps = 56/246 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY---------------YDEEK 46 K Y F ++ + ++ +L + Y E+ Sbjct: 374 KIYRNFL--CLDHVKEVLTTTRSPLAELTVLKKLCDHPRLLSARACTQLDLDGQEYLEQD 431 Query: 47 HWKEV-------------------HDEKIKALEVIIEK--ANAAPIIVAYHFNSDL---- 81 H E K+ L ++ + +V L Sbjct: 432 HESEAAVLSGANKIDHLSDETLIQESGKMLFLVGLLGRLREEGHRTLVFSQSRKMLDIIE 491 Query: 82 -----ARLQKAFPQGRTLD--KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + G + I + + G G+ L N +V Sbjct: 492 RVLSSRQFKIMRIDGTVTHLTEREKRINAFQSNKDYSVFLLTTQVGGVGITLTA-ANRVV 550 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ + V R + G K V +Y LI T++E + +R K ++ Sbjct: 551 IFDPSWNPAT-----DAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIRQ 605 Query: 194 LLNALK 199 K Sbjct: 606 TTGDKK 611 >gi|170579417|ref|XP_001894822.1| SNF2 family N-terminal domain containing protein [Brugia malayi] gi|158598445|gb|EDP36333.1| SNF2 family N-terminal domain containing protein [Brugia malayi] Length = 926 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 21/183 (11%) Query: 34 QLANGAVYYDEEKHWKE--VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLAR------ 83 QL + + +E + K++ L+ ++ K +++ F S + Sbjct: 743 QLCSKFTSTQKFILNEEVALESGKLRELDKLLPSIKKKGDKVLIFSQFTSMMDILEVYLR 802 Query: 84 ----LQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + I E+N + + + G G+NL N ++ + Sbjct: 803 LRDYQYCRLDGSTPVMERQDVINEYNSSPDLFVFLLSTKAGGLGINLTA-ANHIILHDID 861 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++ ++ R + G + VFV LI+ +T++E +L + K ++ + A Sbjct: 862 FNP-----YNDKQAEGRCHRMGQTKEVFVVRLISADTVEEEMLALAQKKLELEKEVTGAS 916 Query: 199 KKE 201 E Sbjct: 917 TAE 919 >gi|156844645|ref|XP_001645384.1| hypothetical protein Kpol_534p5 [Vanderwaltozyma polyspora DSM 70294] gi|206557735|sp|A7TJI3|INO80_VANPO RecName: Full=Putative DNA helicase INO80 gi|156116046|gb|EDO17526.1| hypothetical protein Kpol_534p5 [Vanderwaltozyma polyspora DSM 70294] Length = 1556 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 59/158 (37%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K+K L+ ++ + +++ + + +++ + + Sbjct: 1376 SAKLKKLDELLVELKKGDHRVLIYFQMTKMMDLMEEYLTYRQYSHIRLDGSSKLEDRRDL 1435 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I + + G G+NL + ++F+ W+ I+ + R + Sbjct: 1436 VHDWQTRPDIFIFLLSTRAGGLGINLTA-ADTVIFYDSDWNPT-----IDSQAMDRAHRL 1489 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V VY L+ + TI+E + R + K +Q +++ Sbjct: 1490 GQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEG 1527 >gi|83764573|dbj|BAE54717.1| unnamed protein product [Aspergillus oryzae] Length = 1455 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 70/209 (33%), Gaps = 31/209 (14%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYD---EEKHWKEVHDEK----------IKALEVIIE 64 + E N + ++ + Y EE+ K + L + Sbjct: 901 KQAERQNLNNILMQLRKCLCHPFIYSTAIEERTNNATASHKHLVEAAGKLQLLQLMLPKL 960 Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL-- 112 + +++ F +L ++ + + I ++N P Sbjct: 961 RERGHRVLIFSQFLDNLDIVEDFLDGLGLLHCRLDGRMSSLEKQKMIDQYNAQDSPYFAF 1020 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G G+NL + ++ ++ + ++R + G K V V+ L+ Sbjct: 1021 LLSTRSGGVGINL-ATADTVIIMDPDFNPHQDM-----QALSRAHRIGQKNKVLVFQLMT 1074 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + +E ++Q + K + +L++ + E Sbjct: 1075 RGSAEEKIMQIGKKKMVLDHVLIDRMVSE 1103 >gi|325183015|emb|CCA17469.1| hypothetical protein SELMODRAFT_162307 [Albugo laibachii Nc14] Length = 1363 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 23/222 (10%), Positives = 71/222 (31%), Gaps = 31/222 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEVH------- 52 Y + G+ + ++ ++ + ++ ++ Sbjct: 510 LYKSLLLRDMDTITGKVGAGVSRSALQNIVMQLRKCCGHPYLFEGQEDRTLDPLGDHVVE 569 Query: 53 -------------DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 K + V++ + + F + + Sbjct: 570 NCGKMVLLDKLLKKLKQRGSRVLLFTQMTRVLDIFEDFCRMRKYEYCRIDGRTSYEDRES 629 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ +N + + + G G+NL Y +I++ + W+ + + R Sbjct: 630 AIEAYNELDSSKFVFLLSTRAGGLGINL-YTADIVILYDSDWNPQA-----DLQAQDRAH 683 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V VY + ++++E +++R + K + +++ + Sbjct: 684 RIGQKKEVNVYRFVTSDSVEEKIIERAQQKLKLDAMVVQQGR 725 >gi|195151315|ref|XP_002016593.1| GL10420 [Drosophila persimilis] gi|194110440|gb|EDW32483.1| GL10420 [Drosophila persimilis] Length = 1641 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 7/123 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + + + E+N ++ L + G+NL G N ++ F Sbjct: 974 TRSYSYFRLDGSTSSQERERLVNEFNANSQVKLFLISTRAGSLGINLT-GANRVIIFDAS 1032 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ + V R + G + +VY ++ +++ + R K + D +++ Sbjct: 1033 WNP-----CHDTQAVYRIYRYGQTKPCYVYRIVMDKCLEKKIYDRQIKKQGMSDRIVDEC 1087 Query: 199 KKE 201 E Sbjct: 1088 NPE 1090 >gi|320582098|gb|EFW96316.1| helicase of the Snf2/Rad54 family [Pichia angusta DL-1] Length = 972 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 19/176 (10%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ 85 + + + + + + K++ + +I K ++V F L L+ Sbjct: 780 ELNRLCHTYSKQLASFQLDNEAYYQSGKVRKMLQLINKVTEKGEKVLVFSLFTQVLDILE 839 Query: 86 KAFPQGRTLD----------KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + I ++ +P++ + G G+NL N ++ Sbjct: 840 MVLSLNQIKFLRLDGQTSVDERQGIIDKFYEADDVPVMLLSTKAGGFGINL-VCANNVII 898 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 F ++ + ++ R + G + V VY +I ++TI+E +LQ + K + Sbjct: 899 FDQSFNPHD-----DKQAEDRAHRVGQTKEVNVYRIICRDTIEENILQLAQNKLQL 949 >gi|198458067|ref|XP_002138492.1| GA24365 [Drosophila pseudoobscura pseudoobscura] gi|198136210|gb|EDY69050.1| GA24365 [Drosophila pseudoobscura pseudoobscura] Length = 1651 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 7/123 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + + + E+N ++ L + G+NL G N ++ F Sbjct: 974 TRSYSYFRLDGSTSSQERERLVNEFNANSQVKLFLISTRAGSLGINLT-GANRVIIFDAS 1032 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ + V R + G + +VY ++ +++ + R K + D +++ Sbjct: 1033 WNP-----CHDTQAVYRIYRYGQTKPCYVYRIVMDKCLEKKIYDRQIKKQGMSDRIVDEC 1087 Query: 199 KKE 201 E Sbjct: 1088 NPE 1090 >gi|190345390|gb|EDK37263.2| hypothetical protein PGUG_01361 [Meyerozyma guilliermondii ATCC 6260] Length = 1103 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 77/207 (37%), Gaps = 26/207 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSAS---KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + E DL A + + ++ NG + + E+ ++ Sbjct: 881 YDGYDEEAIEDLFSPKSRAPEKFTSTDIISRLIEETNGFTPSTKIEKCIELVNQ------ 934 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP 110 I K++ IIV F + ++ + +LD TI+ + +G Sbjct: 935 -IRTKSSEEKIIVFSQFTTLFDLMKLVLDKKGIPFLRYDGSMSLDARNNTIKNFYQGSTQ 993 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + GL L N ++ +W+ +E + R + G +R VFV+ + Sbjct: 994 VLLISLRAGNVGLTLT-CANHVILMDPFWNP-----FVEEQAMDRAHRIGQQREVFVHRI 1047 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +TI+ +++ + K + L+ Sbjct: 1048 LLNDTIEGRIMELQKYKKEMVQNALDE 1074 Score = 35.1 bits (79), Expect = 5.9, Method: Composition-based stats. Identities = 3/42 (7%), Positives = 12/42 (28%), Gaps = 3/42 (7%) Query: 4 YHKFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYY 42 Y ++ + +G + + ++ Q + Sbjct: 709 YDALEQNIQSKAEGLLNSAGSTTSILTLLLRLRQACCHSYLV 750 >gi|159128918|gb|EDP54032.1| DNA excision repair protein (Rad26L), putative [Aspergillus fumigatus A1163] Length = 1008 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + + K+ + AN ++V H L LQ F T Sbjct: 611 NYANPEFCGKWKVLRKLLKWWHANGDKVLVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMT 670 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + E+N + K + S G GLN+ N +V W+ + Sbjct: 671 YEERTKVVDEFNSDPKQFVFLISTRSGGVGLNITS-ANKVVVVDPNWNPSH-----DLQA 724 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ LI+ TI+E+V R K + Sbjct: 725 QDRAYRIGQSRNVEVFRLISVGTIEEIVYARQIYKQQQAN 764 >gi|70989315|ref|XP_749507.1| DNA excision repair protein (Rad26L) [Aspergillus fumigatus Af293] gi|66847138|gb|EAL87469.1| DNA excision repair protein (Rad26L), putative [Aspergillus fumigatus Af293] Length = 1008 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + + K+ + AN ++V H L LQ F T Sbjct: 611 NYANPEFCGKWKVLRKLLKWWHANGDKVLVFSHSVRLLKMLQMLFHYTSYNVSYLDGSMT 670 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + E+N + K + S G GLN+ N +V W+ + Sbjct: 671 YEERTKVVDEFNSDPKQFVFLISTRSGGVGLNITS-ANKVVVVDPNWNPSH-----DLQA 724 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ LI+ TI+E+V R K + Sbjct: 725 QDRAYRIGQSRNVEVFRLISVGTIEEIVYARQIYKQQQAN 764 >gi|196008861|ref|XP_002114296.1| hypothetical protein TRIADDRAFT_11949 [Trichoplax adhaerens] gi|190583315|gb|EDV23386.1| hypothetical protein TRIADDRAFT_11949 [Trichoplax adhaerens] Length = 616 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 17/160 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQ 102 K +I K + + +++ + L L+ + ++ Sbjct: 424 KMKALEALLIKFKKDGSKVLLFSYSVQLLNILETYIMCKGINYCRLDGNTRIEQRADIVR 483 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++N + +I L + GLN G N ++ F W+ + R + G Sbjct: 484 KFNNDPQISLCLISTKAGSLGLNFT-GANSVLIFDPNWNPAH-----DLQAQDRAYRIGQ 537 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V VY LI TI+E++ R K + ++ + K+ Sbjct: 538 RCDVRVYRLITSGTIEEVMYLRQIYKLQLANVAMQNSKER 577 >gi|19114237|ref|NP_593325.1| fun thirty related protein Fft1 [Schizosaccharomyces pombe 972h-] gi|74676241|sp|P87114|FFT1_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase fft1; AltName: Full=Fun thirty-related protein 1 gi|2094863|emb|CAB08602.1| fun thirty related protein Fft1 [Schizosaccharomyces pombe] Length = 944 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 68/202 (33%), Gaps = 20/202 (9%) Query: 7 FQRELYCDLQGENI-EAFNSAS--KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + + Y D + I E S + K + + + K ++ Sbjct: 716 LREDAYLDANPQYIFEDMEVMSDFELHKLADQYRHLHPFALKGKPWMDSAKVKKLCSLLK 775 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLL 112 + I++ F L L+ ++ I +++ + Sbjct: 776 KSRPNERILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQLIDDFHTNENYKVF 835 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G G+NL NI++ F ++ + R + G R V VY LI Sbjct: 836 LLSTKSGGFGINLT-CANIVILFDCSFNPFDDM-----QAEDRAHRVGQTRPVHVYRLIT 889 Query: 173 QNTIDELVLQRLRTKSTIQDLL 194 +NTI+E + + TK T++ L Sbjct: 890 KNTIEENIRRLANTKLTLESSL 911 >gi|159123101|gb|EDP48221.1| DNA excision repair protein Rad16, putative [Aspergillus fumigatus A1163] Length = 940 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + + IV F S L ++ T + +I + N + Sbjct: 778 KLRSQKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQRQRSIDYFMNNVDV 837 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 838 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 891 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + LN + E + Sbjct: 892 LCIEDSVESRIVLLQEKKANLINGTLNKDQGEALE 926 >gi|195089759|ref|XP_001997485.1| GH22211 [Drosophila grimshawi] gi|193891548|gb|EDV90414.1| GH22211 [Drosophila grimshawi] Length = 1076 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 33/247 (13%), Positives = 74/247 (29%), Gaps = 53/247 (21%) Query: 1 MKQYHKF----QRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKE---- 50 ++ Y F ++ L + + N + Sbjct: 765 LRLYEDFSNKHLKDCLDKLDDTENLGTKSHIFQALRYLQNVCNHPKLVLRQPSDDLSSSV 824 Query: 51 --------------VHDEKIKALEVIIEKA---------NAAPIIVAYHFNSDLARLQKA 87 H K+ AL+ ++ + ++ + L ++ Sbjct: 825 AAQLALTNSTLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEHD 884 Query: 88 FPQGR-------------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + +N + I +L G GLNL G + ++ Sbjct: 885 LLRKHLPRVTYLRLDGSVPASMRQDIVNNFNSDPSIDVLLLTTLVGGLGLNLT-GADTVI 943 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ M + + R + G K+ V VY LI +N+++E ++ + K + Sbjct: 944 FVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMSLQKFKIVTANT 998 Query: 194 LLNALKK 200 +++A Sbjct: 999 VVSAENA 1005 >gi|302839537|ref|XP_002951325.1| hypothetical protein VOLCADRAFT_61396 [Volvox carteri f. nagariensis] gi|300263300|gb|EFJ47501.1| hypothetical protein VOLCADRAFT_61396 [Volvox carteri f. nagariensis] Length = 192 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 9/124 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F + ++ +Q +N + KI + S G G+NL G + ++F+ Sbjct: 72 FLNLHGHTYMRLDGSTRPEQRQVLMQRFNTDPKIFVFILSTRSGGVGINLT-GADTVIFY 130 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAV--FVYYLIAQNTIDELVLQRLRTKSTIQDL 193 W+ ++ R + G R V +Y L+++NTI+E +L++ K + L Sbjct: 131 DSDWNPA-----MDAQAQDRCHRIGQTREVCVHIYRLVSENTIEENILRKSDQKRQLDYL 185 Query: 194 LLNA 197 + + Sbjct: 186 AIQS 189 >gi|238504250|ref|XP_002383356.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus flavus NRRL3357] gi|220690827|gb|EED47176.1| chromatin remodeling complex subunit (Chd3), putative [Aspergillus flavus NRRL3357] Length = 1455 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 70/209 (33%), Gaps = 31/209 (14%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYD---EEKHWKEVHDEK----------IKALEVIIE 64 + E N + ++ + Y EE+ K + L + Sbjct: 901 KQAERQNLNNILMQLRKCLCHPFIYSTAIEERTNNATASHKHLVEAAGKLQLLQLMLPKL 960 Query: 65 KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL-- 112 + +++ F +L ++ + + I ++N P Sbjct: 961 RERGHRVLIFSQFLDNLDIVEDFLDGLGLLHCRLDGRMSSLEKQKMIDQYNAQDSPYFAF 1020 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G G+NL + ++ ++ + ++R + G K V V+ L+ Sbjct: 1021 LLSTRSGGVGINL-ATADTVIIMDPDFNPHQDM-----QALSRAHRIGQKNKVLVFQLMT 1074 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + +E ++Q + K + +L++ + E Sbjct: 1075 RGSAEEKIMQIGKKKMVLDHVLIDRMVSE 1103 >gi|194744638|ref|XP_001954800.1| GF18453 [Drosophila ananassae] gi|190627837|gb|EDV43361.1| GF18453 [Drosophila ananassae] Length = 1056 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 58/160 (36%), Gaps = 22/160 (13%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKD 97 K+ + I++ K+ IV + S L L+ + Sbjct: 883 PSSKMLKVMEILKTSILKSKDDKAIVVSQWTSVLDILRDHLEHAGLPTLSLNGTIPVKNR 942 Query: 98 PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N + +L + G GLNL G N L+ L W+ + E R Sbjct: 943 QDIVNQFNNRQSDKRILLLSLTAGGVGLNL-IGANHLLLLDLHWNPQL-----EAQAQDR 996 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V +Y + +T+++ + K + + +L Sbjct: 997 IYRVGQKKDVIIYKFMCADTVEQRIKALQDKKLELANGVL 1036 Score = 41.7 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 5/51 (9%), Positives = 16/51 (31%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 Y Q+ + +++ ++ Q+ D +E ++ Sbjct: 760 YKMHQKFSKMAGGKKEVKSHEILVLLLRLRQICCHPGLIDAMLEGEEANNM 810 >gi|241809906|ref|XP_002414557.1| helicase, putative [Ixodes scapularis] gi|215508768|gb|EEC18222.1| helicase, putative [Ixodes scapularis] Length = 790 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 18/171 (10%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----- 92 G Y +E I + KA + ++V L L+ R Sbjct: 197 GPPYTTDEHIVYNCGKMVILDKLLPKLKAQGSRVLVFSQMTRMLDILEDYCLWRRYGYCR 256 Query: 93 -----TLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++ +I E+N + G G+NL ++++ F W+ + Sbjct: 257 LDGQTPHEERTLSINEFNRPGSEKFLFMLSTRAGGLGINL-ATADVVILFDSDWNPQ--- 312 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ + R + G +AV V+ LI +NT++E +++R K + +++ Sbjct: 313 --VDLQAMDRAHRIGQTKAVRVFRLITENTVEERIVERAEVKLRLDTVVIQ 361 >gi|83318941|emb|CAJ38808.1| Lodestar protein [Platynereis dumerilii] Length = 1244 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 63/165 (38%), Gaps = 25/165 (15%) Query: 52 HDEKIKALEVIIEKA-------NAAPIIVAYHFNSDLARLQKA----------FPQGRTL 94 KI+ + I++ N + ++ + L ++ Sbjct: 1033 PSTKIQNILEKIKEIKKESPPGNPSKCVIVSQWTKMLDVIEYHLKSEGVQCCSIRGDMPP 1092 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + +N ++ + G GLNL GGN L+ L W+ Q +RI Sbjct: 1093 KKRSEIVDLFNTPSSGPEVMLLSLRAGGVGLNL-IGGNHLIMVDLHWNPALEAQACDRI- 1150 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ VF++ + +NT++E + ++K + + +L+ Sbjct: 1151 ----YRVGQKKDVFIHRFVCKNTVEEKIQMLQKSKMALAENILSG 1191 >gi|66356826|ref|XP_625591.1| Swi/SNf2 RAD26 [Cryptosporidium parvum Iowa II] gi|46226589|gb|EAK87577.1| Swi/SNf2 RAD26 [Cryptosporidium parvum Iowa II] Length = 1181 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +N I L G GLN+ G N ++ + WW+ + R Sbjct: 779 RFSLVKRFNQNQSIFLFILTSRVGGVGLNIT-GANRVILYDPWWNPMT-----DVQAKER 832 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G K+ V VY LI ++TI+E + QR K I +L K + Sbjct: 833 CWRIGQKKEVIVYRLITRDTIEEKIFQRQLFKEFIAKQILKDPKSQ 878 >gi|328860513|gb|EGG09619.1| hypothetical protein MELLADRAFT_95838 [Melampsora larici-populina 98AG31] Length = 1765 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 27/237 (11%), Positives = 70/237 (29%), Gaps = 40/237 (16%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVY----------YDEE 45 K Y + + + + + ++ + ++ Sbjct: 1016 KVYKGLLSKNVAVITAIYSKKKNKHSKASCMNLLMQLRKALAHPYLNDPEIEPDVSDEQT 1075 Query: 46 KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--------------FP 89 K+ L+ I K I++ F L +++ Sbjct: 1076 HDNLVEASGKLVFLQKFIPKLLKRGHRILIFSQFTIFLDIMERFLEGEERPYLRLSTLQD 1135 Query: 90 QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + I +N L + G G+NL + ++ ++ Sbjct: 1136 GTTSQLDRQTRIDAFNRPNSNHNLFLLSTRAGGAGINL-ATADTVIILDPDYNP-----H 1189 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + ++R + G K+ V V+ L+ + +E ++Q + K + L++ + +E Sbjct: 1190 NDLQAISRAHRFGQKKPVNVFKLMTSASAEERIVQMGKRKLVLDHLVIQKVSEEETE 1246 >gi|302809340|ref|XP_002986363.1| hypothetical protein SELMODRAFT_123971 [Selaginella moellendorffii] gi|300145899|gb|EFJ12572.1| hypothetical protein SELMODRAFT_123971 [Selaginella moellendorffii] Length = 585 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 56/145 (38%), Gaps = 17/145 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW-NEG 107 ++ +I K +A +V F S L + +F G +L + I + N+ Sbjct: 446 VKKMISKDTSAKGLVFSQFTSMLDLIGYSFELAGVKCVKLDGGMSLSQRSTAIDTFRNDP 505 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + L + G LNL + + WW+ +E R + G + + V Sbjct: 506 ECKLFLMSLKAGGVALNLT-VASYIFLMDPWWNPA-----VEHQAQDRIHRIGQYKPIRV 559 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQD 192 + +N+++E +L+ K + + Sbjct: 560 TRFVIENSVEERILKLQEKKQLVFE 584 >gi|225557429|gb|EEH05715.1| ATP-dependent helicase RIS1 [Ajellomyces capsulatus G186AR] Length = 1083 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 38/188 (20%) Query: 47 HWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTLD---------- 95 + + KI+ L I++ ++ IV F S L +++ Sbjct: 810 TPEHLASTKIRYLMKILKAESGDYKFIVFSFFTSMLNKIEPFLKDSHIGYVRYDGAMRND 869 Query: 96 -KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL------------- 141 ++ + N K +L + GLNL + +V +W+ Sbjct: 870 LREISLDKLRNSPKTRVLLCSLRAGSLGLNLTA-ASRVVILEPFWNPVWHSSASSQTIFY 928 Query: 142 ------------EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + Q +E + R + V +Y L +NT++E ++ K Sbjct: 929 SKFQSQKSELTCNQTPQFVEEQAIDRVHRLNQTVDVKIYKLTIKNTVEERIVDLQERKRE 988 Query: 190 IQDLLLNA 197 + + + Sbjct: 989 LANATIEG 996 Score = 39.0 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 15/43 (34%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + + L + +NI ++ ++ Q N Sbjct: 550 YKRLEQRTDKTLERMIGDDNINYASALVLLLRLRQACNHPDLV 592 >gi|70987425|ref|XP_749126.1| DNA excision repair protein Rad16 [Aspergillus fumigatus Af293] gi|66846756|gb|EAL87088.1| DNA excision repair protein Rad16, putative [Aspergillus fumigatus Af293] Length = 940 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + + IV F S L ++ T + +I + N + Sbjct: 778 KLRSQKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQRQRSIDYFMNNVDV 837 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 838 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 891 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + LN + E + Sbjct: 892 LCIEDSVESRIVLLQEKKANLINGTLNKDQGEALE 926 >gi|303390601|ref|XP_003073531.1| DNA repair and recombination protein [Encephalitozoon intestinalis ATCC 50506] gi|303302678|gb|ADM12171.1| DNA repair and recombination protein [Encephalitozoon intestinalis ATCC 50506] Length = 688 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 68/218 (31%), Gaps = 47/218 (21%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------------------------- 52 I N S ++ N + K Sbjct: 396 IGKANLLSGISMLRKVCNHPRLFIPRKEDGSEDLSEEASGEKNNEETLGLLKKEESQYGL 455 Query: 53 ---DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------PC 99 KIK L ++ K+ ++V L ++K + L D Sbjct: 456 VSSSCKIKILMDLLKKWKSEGNKVLVFSQTIRMLDIIEKCVEKYAYLRMDGRTSTSSRSS 515 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + I + G GLNL G + +V + W+ + R + Sbjct: 516 LVDRFNKDDSIFMFLLTTKVGGLGLNLT-GASRIVIYDPDWNPST-----DTQAKERAWR 569 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G ++ V +Y I ++TI+E V Q+ K + +L+ Sbjct: 570 YGQRKGVEIYRFICKDTIEEKVYQKQIFKDLLGKKVLS 607 >gi|194899384|ref|XP_001979240.1| GG14296 [Drosophila erecta] gi|190650943|gb|EDV48198.1| GG14296 [Drosophila erecta] Length = 1077 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 22/165 (13%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKD 97 KI + I++ K++ IV + S L L++ + Sbjct: 881 PSSKINMVMQILKTSILKSSDDKAIVVSQWTSVLDILREHLSKDGVPTLSLNGSIPVKNR 940 Query: 98 PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N + +L + G GLNL G N L+ L W+ + E R Sbjct: 941 QDIVNQFNERNNQKRVLLLSLTAGGVGLNL-IGANHLLLLDLHWNPQL-----EAQAQDR 994 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G K+ V +Y + +T+++ + K + D +L K+ Sbjct: 995 IYRVGQKKNVIIYKFMCVDTVEQRIKALQDKKLDLADGVLTGAKR 1039 Score = 40.9 bits (94), Expect = 0.099, Method: Composition-based stats. Identities = 7/71 (9%), Positives = 21/71 (29%), Gaps = 6/71 (8%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-----VYYDEEKHWKEVHDEKIKA 58 Y ++ +++ + ++ Q+ + E+ E H Sbjct: 760 YKMHEKFAKMAGSKREVKSHDILVLLLRLRQICCHPGLIDAMLDGEDTQSMEDHSSDSDT 819 Query: 59 LE-VIIEKANA 68 E ++ + N Sbjct: 820 PEIDLLAQLNK 830 >gi|134111577|ref|XP_775325.1| hypothetical protein CNBE0430 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257984|gb|EAL20678.1| hypothetical protein CNBE0430 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1045 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 17/149 (11%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGK 108 E + K +V F S L + + +D Sbjct: 883 EKLRHKDCTIKSLVFSQFVSFLDLIAFRLQRAGFNICRLEGSMTPQQRDATIQHFMKNTG 942 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G LNL +++ WW+ Q ++RI + G KR V V Sbjct: 943 VTVFLISLKAGGVALNLTE-ASMVFMMDSWWNPSVEYQAMDRI-----HRLGQKRPVKVV 996 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ +++I++ ++Q K + + L++ Sbjct: 997 KLVIEDSIEDQIVQLQAKKLAMTEAALSS 1025 >gi|242220532|ref|XP_002476031.1| predicted protein [Postia placenta Mad-698-R] gi|220724754|gb|EED78776.1| predicted protein [Postia placenta Mad-698-R] Length = 808 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 74/200 (37%), Gaps = 30/200 (15%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 +R E++E A +K LQ + K+K L ++E+ + Sbjct: 595 RRGALYRFVKEDMEVMTDAELQLKYLQ-----------PDDCYLQAGKVKVLLQLLERYH 643 Query: 68 --AAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEGK-IPLLFA 114 +++ F L LQK + + E+ + + I + Sbjct: 644 AEGRRVLIFSQFTQILDILQKVLEKEGIRFSLLTGATPVDARQSLVDEFTDDESISVFLL 703 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL ++++ F ++ ++ R + G K+ V V LI + Sbjct: 704 STKAGGMGINLTA-ASVVIMFDQDFNP-----HNDKQAQDRAYRIGQKQNVDVVKLITKG 757 Query: 175 TIDELVLQRLRTKSTIQDLL 194 +I+E +L +TK + + + Sbjct: 758 SIEEDMLALGQTKLALDEAV 777 >gi|145341798|ref|XP_001415990.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576213|gb|ABO94282.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 663 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 70/227 (30%), Gaps = 33/227 (14%) Query: 2 KQYHKFQRELYCDLQ---GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------- 51 K Y + L+ N A+ ++ + D + Sbjct: 440 KCYRALFERNFSFLRQGCDSRESFANFANIMMEVRKCCQHPFLLDGVEAAIAPEGASTTA 499 Query: 52 ---HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK--------- 96 K++ L+ ++ ++ L +G + + Sbjct: 500 LVSSAGKLQLLDKLLPHLREGGHRALIFSQMTRVLDVLEDYCRARGHSYVRLDGSITGKA 559 Query: 97 DPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I ++ + L + G G+NL + +V F W+ + + + Sbjct: 560 RQEAIDKYCAEDSDTFLFLLSTRAGGQGINL-VQADTVVMFDSDWNPQN-----DAQALA 613 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R V VY L+ + T ++ + R K ++ + + +KE Sbjct: 614 RAHRIGQTRQVQVYRLVMRATYEKEMFTRASMKLGLEQAIFGSAEKE 660 >gi|74007793|ref|XP_549075.2| PREDICTED: similar to excision repair cross-complementing rodent repair deficiency complementation group 6 - like [Canis familiaris] Length = 1268 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 61/245 (24%), Gaps = 55/245 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-------------------- 41 + Y KF ++ +E + ++ +L + Sbjct: 401 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARARHLLSLGSVKFSVQG 458 Query: 42 -------------YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 K+ L ++ + +V L +++ Sbjct: 459 ENEGEDASDVDHIDHVTDDTLMEESGKMIFLIELLRRLRDEGHQTLVFSQSRQILNIIER 518 Query: 87 AFPQGR-----------TLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 L + I + G GL L +V Sbjct: 519 LLKNRHFKILRVDGTVTHLVEREKRIHLFQQNKDYSVFLLTTQVGGVGLTLTA-ATRVVI 577 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + V R + G K + VY LI T++E + +R K ++ Sbjct: 578 FDPSWNPAT-----DAQAVDRVYRIGQKENIVVYRLITCGTVEEKIYRRQVFKDSLIRQT 632 Query: 195 LNALK 199 K Sbjct: 633 TGDKK 637 >gi|326489199|dbj|BAK01583.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326497361|dbj|BAK02265.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 838 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTI 101 D + + +IE +A IV F S L ++ + + ++K Sbjct: 670 DALREEIRNMIEHDGSAKGIVFSQFTSFLDLIEFSLQRSGIKCVQLNGKMNMVEKGRAID 729 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N+ + + G LNL + + WW+ +E R + G Sbjct: 730 TFINDPDCRIFLMSLKAGGVALNLT-VASHVFLMDPWWNPA-----VESQAQDRIHRIGQ 783 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + ++T++E +LQ K + D + Sbjct: 784 FKPIRSTRFVIKDTVEERILQLQEKKQLVFDGTVGD 819 >gi|47156981|gb|AAT12357.1| helicase MOT1-like protein [Antonospora locustae] Length = 509 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 78/190 (41%), Gaps = 7/190 (3%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 G ++ +S ++ + L+L + E + ++K ++ + + ++ H Sbjct: 298 GNVNKSTSSFTRIQRLLKLCSTFKLGALEDLLVLMGGNEMKTKALVFCQLKSTIDMITKH 357 Query: 77 FNSDLARLQKAFPQGRTLDK-DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 N A L+ G K + ++N +LF G GLNL G + ++ + Sbjct: 358 VNGVFASLKHLRLDGNVPPKNRQKLVADFNTQDYNILFLTTQIGGLGLNLT-GADTVILY 416 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + + R + G K+ V V+ +I ++TI+E V+ K + + L+ Sbjct: 417 EHDWNP-----FNDLQAMDRVHRLGQKKTVNVFRIILKDTIEEKVMSYQNFKMYVANALV 471 Query: 196 NALKKETIHV 205 N K+ + Sbjct: 472 NYENKDVSQM 481 >gi|261333966|emb|CBH16960.1| DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 984 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 18/160 (11%) Query: 50 EVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + K+ A+ I +IV F L +Q + L + Sbjct: 812 PLRGTKLDAITEYICSIPEEEKVIVFSQFGDTLDLIQLWLQKVKVKTVKLVGSLMLSQRQ 871 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + ++ + + + G GLNLQ N +V WW+ R Sbjct: 872 AVLRAFLHDKSVRAILISLKAGGEGLNLQ-IANHVVLVDPWWNPAVEM-----QAAQRAH 925 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V + + +++E +L+ K + + ++ Sbjct: 926 RIGQTRPVRVVRFVTERSVEERMLELQEKKMLVIEGTIDG 965 >gi|67526707|ref|XP_661415.1| hypothetical protein AN3811.2 [Aspergillus nidulans FGSC A4] gi|40740829|gb|EAA60019.1| hypothetical protein AN3811.2 [Aspergillus nidulans FGSC A4] gi|259481632|tpe|CBF75332.1| TPA: DNA excision repair protein (Rad26L), putative (AFU_orthologue; AFUA_2G03750) [Aspergillus nidulans FGSC A4] Length = 1016 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 17/151 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ + N ++V H L LQ F T + + Sbjct: 625 KWKVLRKLLKWWHGNGDKVLVFSHSVRLLKMLQMLFNHTSYNVSYLDGSMTYETRAKVVD 684 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+N + + + + G GLN+ N +V W+ + R + G Sbjct: 685 EFNSDPRQFVFLISTRAGGVGLNITS-ANKVVIVDPNWNPSH-----DLQAQDRAYRIGQ 738 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R V V+ LI+ TI+E+V R K + Sbjct: 739 TRNVEVFRLISAGTIEEIVYARQIYKQQQAN 769 >gi|119482550|ref|XP_001261303.1| DNA excision repair protein Rad16, putative [Neosartorya fischeri NRRL 181] gi|119409458|gb|EAW19406.1| DNA excision repair protein Rad16, putative [Neosartorya fischeri NRRL 181] Length = 977 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + + IV F S L ++ T + +I + N + Sbjct: 815 KLRSQKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQRQKSIDYFMNNVDV 874 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 875 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 928 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + LN + E + Sbjct: 929 LCIEDSVESRIVLLQEKKANLINGTLNKDQGEALE 963 >gi|150866161|ref|XP_001385659.2| snf family helicase [Scheffersomyces stipitis CBS 6054] gi|149387417|gb|ABN67630.2| snf family helicase [Scheffersomyces stipitis CBS 6054] Length = 1557 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 69/183 (37%), Gaps = 11/183 (6%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 ++ + A LQ G + K K + + +I + + F Sbjct: 1263 KSQTKLSIAFPDKSLLQYDCGKLQ----KLAKLLQNLTAGGHRALIFTQMTKVLDILEQF 1318 Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + ++ +++N + KI + S G G+NL G + ++F+ Sbjct: 1319 LNIHGYRYSRLDGATKIEDRQLLTEKFNRDPKISVFILSTRSGGLGINLT-GADTVIFYD 1377 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ +++ R + G R V +Y +++ TI+ +L++ K + ++++ Sbjct: 1378 SDWNPA-----MDKQCQDRCHRIGQSRDVHIYRFVSEYTIESNILKKANQKRQLDNVVIQ 1432 Query: 197 ALK 199 + Sbjct: 1433 EGE 1435 >gi|58267202|ref|XP_570757.1| DNA repair protein rad16 [Cryptococcus neoformans var. neoformans JEC21] gi|57226991|gb|AAW43450.1| DNA repair protein rad16, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1045 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 17/149 (11%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGK 108 E + K +V F S L + + +D Sbjct: 883 EKLRHKDCTIKSLVFSQFVSFLDLIAFRLQRAGFNICRLEGSMTPQQRDATIQHFMKNTG 942 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + + G LNL +++ WW+ Q ++RI + G KR V V Sbjct: 943 VTVFLISLKAGGVALNLTE-ASMVFMMDSWWNPSVEYQAMDRI-----HRLGQKRPVKVV 996 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+ +++I++ ++Q K + + L++ Sbjct: 997 KLVIEDSIEDQIVQLQAKKLAMTEAALSS 1025 >gi|168705803|ref|ZP_02738080.1| swi/snf family helicase_2 [Gemmata obscuriglobus UQM 2246] Length = 183 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 17/154 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQ 102 K+ L +E+ + I+ + L L K + + + Sbjct: 5 SAKLVQLLSDMEEVAESGRKAIIFSQWVEPLEVLAKALAKYGPLQYHGKIPQPQRTPILD 64 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + +L + GLNLQ+ N + F WW+ IE + R + G Sbjct: 65 RFKSDPSAHVLLMSYGTGSVGLNLQFT-NYVFLFDRWWNPA-----IEDQAINRAHRLGQ 118 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 K V V ++ TI+ + L K + + L+ Sbjct: 119 KHPVTVTRFLSGGTIEGRIADILDAKRKVFNDLI 152 >gi|58261298|ref|XP_568059.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 [Cryptococcus neoformans var. neoformans JEC21] gi|57230141|gb|AAW46542.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 900 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 58/181 (32%), Gaps = 25/181 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQG------- 91 Y + ++ KI L + +V F S L + Q Sbjct: 706 SLYLPSSQARSINSAKIDELVKYLRIFPRDDKTLVFSQFTSFLDCVGVRLEQEGVKFVRF 765 Query: 92 ---RTLDKDPCTIQEWNEGK--------IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I+ + E ++ S GLNL + + WW Sbjct: 766 DGRMPGKQRTEVIKAFQEPVKGDDDEEAPTVMLISLKSGAVGLNLTA-ASNVFLCDPWW- 823 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q IE + R + G K+ V V+ LIA++TI+ VL + K + K Sbjct: 824 ----QSAIEAQAIDRAHRMGQKKVVRVFQLIAEDTIESRVLDIQKRKDAMVAKAFEKSSK 879 Query: 201 E 201 E Sbjct: 880 E 880 >gi|134115669|ref|XP_773548.1| hypothetical protein CNBI1620 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256174|gb|EAL18901.1| hypothetical protein CNBI1620 [Cryptococcus neoformans var. neoformans B-3501A] Length = 899 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 58/181 (32%), Gaps = 25/181 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQG------- 91 Y + ++ KI L + +V F S L + Q Sbjct: 705 SLYLPSSQARSINSAKIDELVKYLRIFPRDDKTLVFSQFTSFLDCVGVRLEQEGVKFVRF 764 Query: 92 ---RTLDKDPCTIQEWNEGK--------IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I+ + E ++ S GLNL + + WW Sbjct: 765 DGRMPGKQRTEVIKAFQEPVKGDDDEEAPTVMLISLKSGAVGLNLTA-ASNVFLCDPWW- 822 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q IE + R + G K+ V V+ LIA++TI+ VL + K + K Sbjct: 823 ----QSAIEAQAIDRAHRMGQKKVVRVFQLIAEDTIESRVLDIQKRKDAMVAKAFEKSSK 878 Query: 201 E 201 E Sbjct: 879 E 879 >gi|299754942|ref|XP_001828302.2| hypothetical protein CC1G_02883 [Coprinopsis cinerea okayama7#130] gi|298410996|gb|EAU93653.2| hypothetical protein CC1G_02883 [Coprinopsis cinerea okayama7#130] Length = 928 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 51/137 (37%), Gaps = 16/137 (11%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 ++ + A I F + T ++ N+ + ++ + Sbjct: 793 LELLGECLDARRIKFIEF----------NGKKSTHERTGALDVIANDPRCHVMLISLKAG 842 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GL++ N ++ WW+ +E ++R + G R V VY +I +TI+ Sbjct: 843 SVGLDITS-CNNVILMDPWWNP-----FVEEQAISRVHRFGQTRPVTVYRIITPDTIEPR 896 Query: 180 VLQRLRTKSTIQDLLLN 196 + + + K T + L+ Sbjct: 897 IQEIQQEKRTQVEAYLD 913 >gi|281200733|gb|EFA74951.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1336 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 33/236 (13%), Positives = 80/236 (33%), Gaps = 44/236 (18%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE------KHWKEV--- 51 ++ Y F +++ + + + ++++ + EE K++ Sbjct: 811 IEIYKTFLNS--EEVKDALNKTSSPLAALTVLKKISDHPLLLHEEMSSCASPEMKQIMHK 868 Query: 52 ------------HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ------- 90 + K++ L ++ K +++ L +++ Sbjct: 869 FGDNSTIKSLVRNSGKMQFLYYLLPNLKQEGHRLLIFSQSVKMLNAIEQLLNYLKLSFLR 928 Query: 91 ----GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + + I E+N + +I GLN+ + +V F W+ Sbjct: 929 IDGSISSSKERQKRIDEFNGDREIFCFLLTIQVGALGLNMTS-ADRVVIFDPSWN----- 982 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++ V R + G + V VY L+ TI+E + ++ K + +LN K + Sbjct: 983 -TVDNQAVDRVYRIGQTKDVVVYRLMCCGTIEEKIYRKQVFKGALMKTMLNQGKGQ 1037 >gi|255714703|ref|XP_002553633.1| KLTH0E03476p [Lachancea thermotolerans] gi|238935015|emb|CAR23196.1| KLTH0E03476p [Lachancea thermotolerans] Length = 1474 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 11/166 (6%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG 91 LQ G + K + D K +I + V F + L Sbjct: 1197 LLQYDCGKLQ----KLATLLRDLKDGGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGA 1252 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ + +N + +I S G G+NL G + ++F+ W+ +++ Sbjct: 1253 TKIEDRQILTERFNTDNRITAFILSSRSGGLGINLT-GADTVIFYDSDWNPA-----MDK 1306 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V +Y ++++TI+ +L++ K + ++++ Sbjct: 1307 QCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQ 1352 >gi|91089209|ref|XP_967093.1| PREDICTED: similar to helicase [Tribolium castaneum] gi|270012470|gb|EFA08918.1| hypothetical protein TcasGA2_TC006624 [Tribolium castaneum] Length = 871 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 72/208 (34%), Gaps = 33/208 (15%) Query: 4 YHKFQREL----YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y E + I N +K +CL+ + K L Sbjct: 641 YKDTVEEYIVQDLLFMSDFEI---NKLTKIHRCLE-------RYMLPDNLILTSGKFLYL 690 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWN-E 106 + I+ + N +++ + L ++ +++ + E+ + Sbjct: 691 DKILAELKQNGHRVLIFSQYVIMLNVMEDYLKIRKHKYLRMDGSTPVNERQDLVDEYMGD 750 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I + + G G+NL + ++ + ++ ++ R + G R V Sbjct: 751 NSIFIFLLSTRAGGLGINLTS-ADTVIIHDIDFNP-----YNDKQAEDRCHRMGQTRPVT 804 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLL 194 VY L++Q TI+E +L+ + K ++ + Sbjct: 805 VYRLVSQGTIEEGMLEMNKEKLKLERQI 832 >gi|110289185|gb|ABB47753.2| SNF2 domain-containing protein, putative, expressed [Oryza sativa Japonica Group] Length = 1476 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 49/125 (39%), Gaps = 16/125 (12%) Query: 91 GRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++ +N+ ++ + G+NL N ++ W+ Sbjct: 1177 STPSSERQNLVERFNDPENIRVKCTLISTRAGYIGINLHS-ANRVILLDGSWNPTH---- 1231 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-------KK 200 + + R + G + V+ Y L+A T++E + +R TK + +++ K+ Sbjct: 1232 -DLQAIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVSRTISKE 1290 Query: 201 ETIHV 205 E +H+ Sbjct: 1291 EMLHL 1295 >gi|66827541|ref|XP_647125.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60475296|gb|EAL73231.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1159 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 74/170 (43%), Gaps = 19/170 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-------- 90 Y+ ++ + E + +K E++ ++ N + +++ L L+ Sbjct: 972 YWIPDEQFIETSTKCLKLKEILAKEIGVNKSKVLIFSQMTRVLDILEDVLDIFGYNFTRL 1031 Query: 91 --GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +++ I ++ + IP+ S G G+NL N+++F+ L ++ + Sbjct: 1032 DGSTPVNERQSIIDHFSSKETIPVFLLSTNSGGLGINLT-CANVVIFYDLSFNPQ----- 1085 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++R R + G +R V +Y L+A+NT+D + + K + D +L Sbjct: 1086 VDRQAEDRAHRLGQEREVIIYKLLAENTVDINIHESANQKKKLNDNVLEE 1135 >gi|332020038|gb|EGI60489.1| Helicase ARIP4 [Acromyrmex echinatior] Length = 3091 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 85 QKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + I E+N KI L + G+NL G N + F W+ Sbjct: 2077 YYRLDGSTSALEREKLINEFNNNPKIHLFLVSTRAGSLGINL-VGANRAIVFDASWNP-- 2133 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V R + G ++ FVY L+ N ++ + R +K + D +++ Sbjct: 2134 ---CHDTQAVCRVYRYGQQKPCFVYRLVTDNCLERKIYDRQISKQGMADRVVD 2183 >gi|307213762|gb|EFN89100.1| Helicase ARIP4 [Harpegnathos saltator] Length = 3154 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + I E+N KI L + G+NL G N + F W+ Sbjct: 2109 YYRLDGSTSALEREKLINEFNSNPKIHLFLVSTRAGSLGINL-VGANRAIVFDASWNP-- 2165 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V R + G ++ FVY L+ N ++ + R +K + D +++ Sbjct: 2166 ---CHDTQAVCRVYRYGQQKPCFVYRLVTDNCLERKIYDRQISKQGMADRVVD 2215 >gi|307179332|gb|EFN67696.1| Helicase ARIP4 [Camponotus floridanus] Length = 3060 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 85 QKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + I E+N KI L + G+NL G N + F W+ Sbjct: 2065 YYRLDGSTSALEREKLINEFNNNPKIHLFLVSTRAGSLGINL-VGANRAIVFDASWNP-- 2121 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V R + G ++ FVY L+ N ++ + R +K + D +++ Sbjct: 2122 ---CHDTQAVCRVYRYGQQKPCFVYRLVTDNCLERKIYDRQISKQGMADRVVD 2171 >gi|268572621|ref|XP_002641368.1| Hypothetical protein CBG13225 [Caenorhabditis briggsae] Length = 1077 Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 20/166 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCT 100 K++ I+E +++ + S L +++ G Sbjct: 903 SCKMQKTLEIVEDILEKKEKVVIVSQWTSVLNLVEQHIQNGGHNYTSITGQVQVKDRQER 962 Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N +G ++ + G GLNL G ++++ L W+ QQ +RI + Sbjct: 963 VDSFNQEKGGARVMLLSLTAGGVGLNLVGGNHLVMI-DLHWNPALEQQACDRI-----YR 1016 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G K+ V+++ LI +NTI++ V++ K T+ +L+ ++ Sbjct: 1017 MGQKKPVYIHRLIVKNTIEQRVVELQEKKMTLAASVLDGTATRKMN 1062 >gi|25465825|pir||T51892 hypothetical protein B23I11.40 [imported] - Neurospora crassa Length = 1173 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 49/159 (30%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK------------DPC 99 KI L I+ +A IV F S L ++ K Sbjct: 938 SSKIHELIAILRREAPTHKFIVFSQFTSMLDLVEPFLRHHLPDIKHVRYDGKMSNDAREA 997 Query: 100 TIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + + +L GLNL ++ +W+ +E + R + Sbjct: 998 SLHSLRKDPRTRILLCSLKCGSLGLNLTA-ATRVIIVEPFWNP-----FVEEQAIDRVHR 1051 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++ +L+ K + + Sbjct: 1052 LTQTVDVVVYKLTVRGTVEARILELQEKKRLLAQTAVEG 1090 Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 12/42 (28%), Gaps = 4/42 (9%) Query: 4 YHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVY 41 Y + L+ G + N+ ++ Q N Sbjct: 582 YKALEERADQSLEKMMKGRTVNYANALVLLLRLRQACNHPRL 623 >gi|85097277|ref|XP_960412.1| hypothetical protein NCU11284 [Neurospora crassa OR74A] gi|28921903|gb|EAA31176.1| conserved hypothetical protein [Neurospora crassa OR74A] gi|39979195|emb|CAE85566.1| conserved hypothetical protein [Neurospora crassa] Length = 1197 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 49/159 (30%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK------------DPC 99 KI L I+ +A IV F S L ++ K Sbjct: 962 SSKIHELIAILRREAPTHKFIVFSQFTSMLDLVEPFLRHHLPDIKHVRYDGKMSNDAREA 1021 Query: 100 TIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + + +L GLNL ++ +W+ +E + R + Sbjct: 1022 SLHSLRKDPRTRILLCSLKCGSLGLNLTA-ATRVIIVEPFWNP-----FVEEQAIDRVHR 1075 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L + T++ +L+ K + + Sbjct: 1076 LTQTVDVVVYKLTVRGTVEARILELQEKKRLLAQTAVEG 1114 Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 12/42 (28%), Gaps = 4/42 (9%) Query: 4 YHKFQRELYCDLQ----GENIEAFNSASKTVKCLQLANGAVY 41 Y + L+ G + N+ ++ Q N Sbjct: 606 YKALEERADQSLEKMMKGRTVNYANALVLLLRLRQACNHPRL 647 >gi|328705649|ref|XP_001947067.2| PREDICTED: hypothetical protein LOC100164965 [Acyrthosiphon pisum] Length = 2250 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 7/145 (4%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHP 116 +IE+ I + + + I ++N + L Sbjct: 1724 FTLDLIEEFLQRNKIPGKDEHWCRNCDYYRLDGSTSASEREKLINDFNICNTVHLFLVST 1783 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G+NL G N ++ F W+ + V R + G ++ FVY L+ N + Sbjct: 1784 RAGSLGINL-VGANRVIVFDASWNP-----CHDTQAVCRVYRYGQQKPCFVYRLVTDNCL 1837 Query: 177 DELVLQRLRTKSTIQDLLLNALKKE 201 ++ + R K + D +++ + Sbjct: 1838 EKKIYDRQINKQVMADRVVDECNPD 1862 >gi|242077288|ref|XP_002448580.1| hypothetical protein SORBIDRAFT_06g029476 [Sorghum bicolor] gi|241939763|gb|EES12908.1| hypothetical protein SORBIDRAFT_06g029476 [Sorghum bicolor] Length = 864 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPAS 118 IV + L LQ + + + + + K+ ++ + Sbjct: 713 KAIVFSQWTGMLDLLQLSLNRNDIQFRRLDGSMCLNLRERQVNEFKTDPKVRVMLMSLKA 772 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ WW+ E V R + G R V V ++T+++ Sbjct: 773 GNLGLNMVDACH-VIMLDPWWNP-----YAEDQAVDRAHRIGQTRPVTVSRFTVKDTVED 826 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L K + + Sbjct: 827 RILALQEKKRKMVESAFGE 845 >gi|241952408|ref|XP_002418926.1| dna repair and recombination protein rdh54, putative [Candida dubliniensis CD36] gi|223642265|emb|CAX44234.1| dna repair and recombination protein rdh54, putative [Candida dubliniensis CD36] Length = 882 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 28/198 (14%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-------------VIIEKAN 67 +S + ++ N +++ +K++ ++K I+ Sbjct: 551 SGSDSFTMINLFKKICNSPSLLADDEFFKKIVEQKFNLGMSSGKLNILVPLLLEIVSLKE 610 Query: 68 AAPIIVAYHFNSDL--------ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 +I Y DL + + ++N I + S Sbjct: 611 KIVLISNYTKTLDLLETVLRKINLTFSRLDGSTPNNVRSKLVNQFNTNPDINVFLLSSKS 670 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL G + L+ F W+ Q + RI + G + F+Y L IDE Sbjct: 671 GGMGINL-VGASRLILFDNDWNPATDLQSMSRI-----HRDGQVKPCFIYRLFTTGCIDE 724 Query: 179 LVLQRLRTKSTIQDLLLN 196 + QR K+ + L+ Sbjct: 725 KIFQRQLVKNKLSSKFLD 742 >gi|15242960|ref|NP_197667.1| RAD5; ATP binding / ATP-dependent helicase/ DNA binding / helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / protein binding / zinc ion binding [Arabidopsis thaliana] gi|60390961|sp|Q9FNI6|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 gi|10178249|dbj|BAB11681.1| DNA repair protein RAD5 protein [Arabidopsis thaliana] gi|110737306|dbj|BAF00599.1| hypothetical protein [Arabidopsis thaliana] gi|332005687|gb|AED93070.1| DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] Length = 1029 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 59/158 (37%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDP 98 V KI AL +E +++ + I+ + + L LQ + + + Sbjct: 860 VESSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQRE 919 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++E+ +G I +L + G G+NL + WW+ +E V R Sbjct: 920 KVLKEFSEDGSILVLLMSLKAGGVGINLTA-ASNAFVMDPWWNPA-----VEEQAVMRIH 973 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V + I + T++E + K + L Sbjct: 974 RIGQTKEVKIRRFIVKGTVEERMEAVQARKQRMISGAL 1011 Score = 35.1 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 4/56 (7%), Positives = 9/56 (16%), Gaps = 6/56 (10%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD 53 Y + + ++ Q + E D Sbjct: 695 YDALFKRSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSD 750 >gi|320032522|gb|EFW14475.1| DNA repair protein RAD16 [Coccidioides posadasii str. Silveira] Length = 945 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 54/155 (34%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ + T + +I + N ++ Sbjct: 783 KLRSKKQTHKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMTPVQRQKSIDYFMNNVEV 842 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 843 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITK 896 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + +N + E + Sbjct: 897 LCIEDSVESRMVLLQEKKANMINGTINKDQSEALE 931 >gi|302698345|ref|XP_003038851.1| hypothetical protein SCHCODRAFT_104375 [Schizophyllum commune H4-8] gi|300112548|gb|EFJ03949.1| hypothetical protein SCHCODRAFT_104375 [Schizophyllum commune H4-8] Length = 1135 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 22/165 (13%) Query: 53 DEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDP 98 K+KAL + ++ +V F S + ++ F + K Sbjct: 959 STKLKALMDNLLRLKKEDPGFRAVVFSQFTSFMDLIEITLKREGFDQYRFDGSMDVKKRN 1018 Query: 99 CTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+ ++ + G GLNL N + WW+ Q I+R+ Sbjct: 1019 HAISEFKAPSDAPKIMVVSLKAGGVGLNLTN-ANYVFMMDCWWNAATENQAIDRV----- 1072 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G ++ VFV + I +TI+ +LQ + K+ I ++ Sbjct: 1073 HRLGQEKPVFVKHFIISDTIEGRILQIQKRKTAIVKEAFRGTARD 1117 >gi|294955606|ref|XP_002788589.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239904130|gb|EER20385.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 1363 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 59/163 (36%), Gaps = 17/163 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 D + + + E+ +A +V F+ L + G + + + Sbjct: 1194 DALLDEVRKMKERDPSAKGLVFSQFSRMLELVDFKLRREGISCLVLHGGIPMAQRSNILL 1253 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + LL + G GLNLQ + + WW+ Q + R + G Sbjct: 1254 SFRQDPEFTLLLISLKAGGEGLNLQA-ASCVFLLDPWWNPAYEQ-----QAIQRAHRLGQ 1307 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +AV I ++T++E +L K + D + ++ + Sbjct: 1308 TKAVNAVRFITKDTVEERILALQEKKQLVFDGTVGGNEQGALQ 1350 >gi|332190563|gb|AEE28684.1| SNF2 , helicase and zinc-finger domain-containing protein [Arabidopsis thaliana] Length = 1269 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 17/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + +Q++N + ++ Sbjct: 1114 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSL 1173 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ + ++ LWW+ E + R + G R V V ++T+ Sbjct: 1174 KAASLGLNMVAACH-VIMLDLWWNPTT-----EDQAIDRAHRIGQTRPVKVVRFTVKDTV 1227 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 ++ +L + K + Sbjct: 1228 EDRILALQQKKRKMVASAFGE 1248 >gi|225897906|dbj|BAH30285.1| hypothetical protein [Arabidopsis thaliana] Length = 1270 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 17/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + +Q++N + ++ Sbjct: 1115 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSL 1174 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ + ++ LWW+ E + R + G R V V ++T+ Sbjct: 1175 KAASLGLNMVAACH-VIMLDLWWNPTT-----EDQAIDRAHRIGQTRPVKVVRFTVKDTV 1228 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 ++ +L + K + Sbjct: 1229 EDRILALQQKKRKMVASAFGE 1249 >gi|1931638|gb|AAB65473.1| transcription factor RUSH-1alpha isolog; 18684-24052 [Arabidopsis thaliana] Length = 1227 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 17/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + +Q++N + ++ Sbjct: 1072 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSL 1131 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ + ++ LWW+ E + R + G R V V ++T+ Sbjct: 1132 KAASLGLNMVAACH-VIMLDLWWNPTT-----EDQAIDRAHRIGQTRPVKVVRFTVKDTV 1185 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 ++ +L + K + Sbjct: 1186 EDRILALQQKKRKMVASAFGE 1206 >gi|42561912|ref|NP_172577.2| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related [Arabidopsis thaliana] gi|332190562|gb|AEE28683.1| SNF2 , helicase and zinc-finger domain-containing protein [Arabidopsis thaliana] Length = 1226 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 17/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHP 116 IV + L L+ + +Q++N + ++ Sbjct: 1071 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSL 1130 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + GLN+ + ++ LWW+ E + R + G R V V ++T+ Sbjct: 1131 KAASLGLNMVAACH-VIMLDLWWNPTT-----EDQAIDRAHRIGQTRPVKVVRFTVKDTV 1184 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 ++ +L + K + Sbjct: 1185 EDRILALQQKKRKMVASAFGE 1205 >gi|19115879|ref|NP_594967.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces pombe 972h-] gi|15214050|sp|O14139|HRP3_SCHPO RecName: Full=Chromodomain helicase hrp3; AltName: Full=ATP-dependent helicase hrp3 gi|2408073|emb|CAB16277.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces pombe] Length = 1388 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 73/202 (36%), Gaps = 37/202 (18%) Query: 26 ASKTVKCLQLANGAVYYD-----------------EEKHWKEVHDEKIKALEVIIEK--A 66 + V+ + +N +D E ++ K+ L+ ++ + Sbjct: 645 LNIVVELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRR 704 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIP--LLFA 114 + +++ L L + +I +N P + Sbjct: 705 DGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLL 764 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ F W+ + + + R + G K V VY L++++ Sbjct: 765 STRAGGLGINLMT-ADTVIIFDSDWNPQA-----DLQAMARAHRIGQKNHVMVYRLLSKD 818 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 TI+E VL+R R K ++ +++ Sbjct: 819 TIEEDVLERARRKMILEYAIIS 840 >gi|224178882|ref|XP_002187939.1| PREDICTED: hypothetical protein, partial [Taeniopygia guttata] Length = 181 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 47/103 (45%), Gaps = 6/103 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ I+ + + I + + G G+NL + ++F ++ + + + Sbjct: 13 EERHLAIKNFGQQPIFIFLLSTRAGGVGMNLTA-ADTVIFTDSDFNPQN-----DLQAIA 66 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V + LI ++T++E++ +R +K + + ++ Sbjct: 67 RAHRIGQHKPVKIIRLIGRDTVEEIIYRRAASKLRLTNAIVEG 109 >gi|45185972|ref|NP_983688.1| ACR286Cp [Ashbya gossypii ATCC 10895] gi|44981762|gb|AAS51512.1| ACR286Cp [Ashbya gossypii ATCC 10895] Length = 1019 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 68/190 (35%), Gaps = 21/190 (11%) Query: 30 VKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQ 85 ++ +L + + + K+ L+ ++ A +V F L L+ Sbjct: 821 LELHRLCCRFPSLASFQLSEPTWMASGKVHRLQPLLRAAIARREKTLVFSLFTQVLDILE 880 Query: 86 K----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++ I ++ + +P+ + G G+NL N ++ Sbjct: 881 LVLSSLGIAFLRLDGSTPVNDRQALIDRFHTDTDVPVFLLSTKAGGFGINL-VCANHVII 939 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F ++ + +R R + G R V V L+++ T++E +LQ R K + + Sbjct: 940 FDQSFNPHD-----DRQAADRAHRVGQTREVAVTTLVSRATVEEKILQLARHKLALDSSV 994 Query: 195 LNALKKETIH 204 + + H Sbjct: 995 SDRRADDLDH 1004 >gi|50552109|ref|XP_503529.1| YALI0E04136p [Yarrowia lipolytica] gi|49649398|emb|CAG79108.1| YALI0E04136p [Yarrowia lipolytica] Length = 959 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 53/159 (33%), Gaps = 18/159 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPCTI 101 K+ L +++ IV F + R K +D Sbjct: 788 SAKVVKLLELLKADP-RKTIVFSQFTKFFDVLEPFLIRENIRYVKYDGSMPIRKRDAALA 846 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +L GLNL N +V WW+ +Q I+R+ + G Sbjct: 847 TLRADPDTTVLLCSLKCGALGLNLT-CANRVVLLDPWWNPMVSEQAIDRV-----HRIGQ 900 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V VY +++++ ++Q K + ++N ++ Sbjct: 901 TVDVDVYEFSVVDSVEKKIMQLQDKKRKLAGSVINGDRE 939 >gi|330842982|ref|XP_003293445.1| hypothetical protein DICPUDRAFT_158303 [Dictyostelium purpureum] gi|325076230|gb|EGC30034.1| hypothetical protein DICPUDRAFT_158303 [Dictyostelium purpureum] Length = 1044 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 68/174 (39%), Gaps = 17/174 (9%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK-------- 86 LA+ DE+ + K+K + N + +++ L L+ Sbjct: 853 LADKYWIDDEQFYETSAKCIKLKEILQKEIHENKSKVLIFSQMTKVLDILEDVLSIFGES 912 Query: 87 --AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 +++ I + N IP+ + G G+NL N+++F+ L ++ + Sbjct: 913 FTRLDGQTPVNERQDIIDHFTNSKDIPVFLLSTNAGGLGINLT-CANVVIFYDLSFNPQ- 970 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++R R + G +R V VY L+ +NT+D + K + D +L Sbjct: 971 ----VDRQAEDRAHRLGQEREVIVYKLLTENTVDIDIFNSANEKKKLNDNILEE 1020 >gi|309359914|emb|CAP32046.2| hypothetical protein CBG_13225 [Caenorhabditis briggsae AF16] Length = 1082 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 20/166 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCT 100 K++ I+E +++ + S L +++ G Sbjct: 908 SCKMQKTLEIVEDILEKKEKVVIVSQWTSVLNLVEQHIQNGGHNYTSITGQVQVKDRQER 967 Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N +G ++ + G GLNL G ++++ L W+ QQ +RI + Sbjct: 968 VDSFNQEKGGARVMLLSLTAGGVGLNLVGGNHLVMI-DLHWNPALEQQACDRI-----YR 1021 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G K+ V+++ LI +NTI++ V++ K T+ +L+ ++ Sbjct: 1022 MGQKKPVYIHRLIVKNTIEQRVVELQEKKMTLAASVLDGTATRKMN 1067 >gi|290974011|ref|XP_002669740.1| predicted protein [Naegleria gruberi] gi|284083291|gb|EFC36996.1| predicted protein [Naegleria gruberi] Length = 1143 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 29/242 (11%), Positives = 67/242 (27%), Gaps = 54/242 (22%) Query: 2 KQYHK-FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 + Y + + E+ + G+ S L N + Sbjct: 545 RVYTQYLKSEIVKQILGKKSNRSCIFSALSTLKMLCNHPRLNNGSAQILNKDVNEDEAFE 604 Query: 53 -------------------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ 85 K++ + ++++ ++ + + L ++ Sbjct: 605 NFISEGDDKDYLDTSGMTCKELIEESSKLQIIVKLLKEHKKTGHRTLIFSQYKTMLDIVE 664 Query: 86 KAFPQ-----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + G + + + S G GL L + ++ Sbjct: 665 RIITEHLKLKTLRIDGGVAAKERQARVDLFQKNNMYSCFLLTTGSGGVGLTLTA-ADRVI 723 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 W+ QQ ++R + G + V Y LI T++E+V +R K + Sbjct: 724 LIDPHWNPAVDQQAVDR-----AYRVGQTKNVVTYRLITVGTLEEVVYRRQVIKDGLIKN 778 Query: 194 LL 195 L Sbjct: 779 TL 780 >gi|219122221|ref|XP_002181449.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407435|gb|EEC47372.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 707 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 45/148 (30%), Gaps = 23/148 (15%) Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ-----------------GRTLDKDPCTIQEWNEGK 108 + +V F + L + +D + Sbjct: 547 RPGSKALVFSQFVNMLDLTRWRIHSDPCLADLGLGVRILHGGMDVKSRDATLQAFREDPS 606 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + +L + G LNL + + WW+ Q I+R + G R + Sbjct: 607 VRVLLMSLKAGGVALNLT-VASEVYLLDNWWNPAAEMQAIDR-----THRLGQYRPIRAV 660 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 IA+ T++E VLQ K + D + Sbjct: 661 RFIAEGTVEERVLQLQEKKRLVFDGTVG 688 >gi|183979219|dbj|BAG30707.1| decrease in DNA methylation 1 [Brassica rapa] Length = 767 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 66/196 (33%), Gaps = 37/196 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA---------------NAAPII 72 ++ + N + + LE I+ + ++ Sbjct: 492 LAIQLRKNCNHP----DLLVGQLDGSYLYPPLEDIVGQCGKFRLLERLLVRLFAKNHRVL 547 Query: 73 VAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE--GKIPLLFAHPASCG 120 + + L + F + L++ IQE+N+ + + G Sbjct: 548 IFSQWTKILDIMDYYFSEKGFEVCRIDGSVKLEERRRQIQEFNDEKSNCRIFLLSTRAGG 607 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + + + W+ + ++ + R + G + V VY L +I+ V Sbjct: 608 LGINLTA-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRV 661 Query: 181 LQRLRTKSTIQDLLLN 196 L+R +K ++ +++ Sbjct: 662 LKRAYSKLKLEHVVIG 677 >gi|297297256|ref|XP_002808499.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2-like [Macaca mulatta] Length = 1806 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 57/161 (35%), Gaps = 20/161 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K+ L+ ++ + +++ L L + + Sbjct: 767 SSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQ 826 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + G G+NL + +V F W+ + + R Sbjct: 827 ALDHFNADGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQARAH 880 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G K+ V +Y L+ + T++E +++R + K + L++ + Sbjct: 881 RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 921 >gi|297834836|ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp. lyrata] gi|297331140|gb|EFH61559.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp. lyrata] Length = 910 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 67/219 (30%), Gaps = 54/219 (24%) Query: 24 NSASKTVKCLQLANGAVYYDE----------------------------------EKHWK 49 + +L N + + W Sbjct: 471 KVLAYITALKKLCNHPKLIYDTIKSGSPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWV 530 Query: 50 EVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 E+ + ++ + + I++ ++ L + + T+ K Sbjct: 531 ELSGKMHVLSRLLANLRRKTNDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKR 590 Query: 98 PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + N+ + G GLNL G N LV F W+ ++ R Sbjct: 591 QKLVNRLNDPTKDEFAFLLSSKAGGCGLNL-IGANRLVLFDPDWNPAN-----DKQAAAR 644 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G K+ V+VY ++ TI+E V QR +K +Q ++ Sbjct: 645 VWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 683 >gi|261200215|ref|XP_002626508.1| DNA repair protein RAD16 [Ajellomyces dermatitidis SLH14081] gi|239593580|gb|EEQ76161.1| DNA repair protein RAD16 [Ajellomyces dermatitidis SLH14081] Length = 948 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I+ + N + Sbjct: 786 KLRSKKQTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQRQKSIEHFMNNVDV 845 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 846 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 899 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + +N + E + Sbjct: 900 LCIEDSVESRMVLLQEKKANMIRGTINKDQSEALE 934 >gi|66361996|ref|XP_627962.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II] gi|46227534|gb|EAK88469.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II] Length = 877 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 8/126 (6%) Query: 74 AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 DL ++ + ++ +N+ + G G+NL G N Sbjct: 543 FECLCRDLQVPCVRLDGSTSITRRHNLVKTFNDPNSNSFAFLLSSKAGGCGINL-IGANR 601 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 LV F W+ ++ + R + G K+ ++Y L + TI+E + QR K + Sbjct: 602 LVMFDPDWNPAN-----DKQALARVWRDGQKKNCYIYRLFSTGTIEEKIYQRQLCKDGLS 656 Query: 192 DLLLNA 197 +L+ + Sbjct: 657 AMLVTS 662 >gi|62484263|ref|NP_611885.3| CG4049 [Drosophila melanogaster] gi|61678334|gb|AAF47165.3| CG4049 [Drosophila melanogaster] Length = 1669 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 43/118 (36%), Gaps = 7/118 (5%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + + E+N + L + G+NL G N ++ F W+ Sbjct: 1015 YFRLDGSTSSQERERLVNEFNANSNVKLFLISTRAGSLGINLT-GANRVIIFDASWNP-- 1071 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G + FVY ++ +++ + R K + D +++ E Sbjct: 1072 ---CHDTQAVYRIYRYGQTKPCFVYRIVMDRCLEKKIYDRQIKKQGMSDRIVDECNPE 1126 >gi|260809914|ref|XP_002599749.1| hypothetical protein BRAFLDRAFT_205765 [Branchiostoma floridae] gi|229285031|gb|EEN55761.1| hypothetical protein BRAFLDRAFT_205765 [Branchiostoma floridae] Length = 1002 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 53/152 (34%), Gaps = 12/152 (7%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQEWNEGKIP- 110 + +E + K + N L + G + I ++N P Sbjct: 646 LSLIEEFLAKTPMPEPPNGFPHNIPLRWAKNKTYYRLDGGTSGQDREKMINQFNVPNSPT 705 Query: 111 -LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L + G+NL G N +V F W+ V R + G + +Y Sbjct: 706 WLFLLSTRAGCLGVNL-VGANRVVVFDASWNPCHDC-----QAVCRVYRYGQTKPCHIYR 759 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 L+ ++++ + R K + D +++ L+ E Sbjct: 760 LVTDKSLEKKIYDRQVNKQGMSDRVVDELQPE 791 >gi|156839953|ref|XP_001643662.1| hypothetical protein Kpol_1040p17 [Vanderwaltozyma polyspora DSM 70294] gi|156114282|gb|EDO15804.1| hypothetical protein Kpol_1040p17 [Vanderwaltozyma polyspora DSM 70294] Length = 797 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 23/186 (12%) Query: 32 CLQLANGAVYYDEEKHWKEV------HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 L + E EK+ L I ++V F L L+ Sbjct: 591 LHTLCCNFPKTLSKYKLDEKAWANSGKVEKLCELLKDIISVKKEKVLVFSLFTQVLDILE 650 Query: 86 K----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 K ++ I ++ + IP+ + G G+NL N ++ Sbjct: 651 KVLSSLNYKFLRLDGSTQVNDRQSLIDKFYEDDTIPIFILSTKAGGFGINL-VCANNVII 709 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F ++ + +R R + G + V + LI +++I+E +LQ + K + + Sbjct: 710 FDQSFNPHD-----DRQAADRAHRVGQTKEVNITTLITKDSIEEKILQLAKNKLDLDTHV 764 Query: 195 LNALKK 200 KK Sbjct: 765 SEDDKK 770 >gi|154291059|ref|XP_001546116.1| hypothetical protein BC1G_15417 [Botryotinia fuckeliana B05.10] gi|150847107|gb|EDN22300.1| hypothetical protein BC1G_15417 [Botryotinia fuckeliana B05.10] Length = 1110 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + K + K+ AL ++ K N +++ F+ L L+ Sbjct: 869 CIKSFDVKKNAWMDSGKVSALVELVTKYKENGDRVLIFSQFSLVLDILESVLNTSMITYT 928 Query: 96 ---------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I+ + + I + G G+NL Y N ++ F ++ ++ Sbjct: 929 RIDGATKIDERQSLIERFRDDTDITAFLLTTKAGGTGINLMY-ANKVIIFDGSFNPQD-- 985 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + R + G R V V L+ + TI+E + + R+K + + Sbjct: 986 ---DVQAENRAHRVGQTRDVEVVRLVTRGTIEEAIWKMGRSKLMLDGRV 1031 >gi|115482344|ref|NP_001064765.1| Os10g0457700 [Oryza sativa Japonica Group] gi|113639374|dbj|BAF26679.1| Os10g0457700 [Oryza sativa Japonica Group] Length = 1319 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 49/125 (39%), Gaps = 16/125 (12%) Query: 91 GRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++ +N+ ++ + G+NL N ++ W+ Sbjct: 1177 STPSSERQNLVERFNDPENIRVKCTLISTRAGYIGINLHS-ANRVILLDGSWNPTH---- 1231 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-------KK 200 + + R + G + V+ Y L+A T++E + +R TK + +++ K+ Sbjct: 1232 -DLQAIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVSRTISKE 1290 Query: 201 ETIHV 205 E +H+ Sbjct: 1291 EMLHL 1295 >gi|326435151|gb|EGD80721.1| serine/threonine protein kinase [Salpingoeca sp. ATCC 50818] Length = 4337 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 49/117 (41%), Gaps = 8/117 (6%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R + ++ I ++N ++ + G+NL N ++ F + W Sbjct: 3835 NRDFVVLQGNDSAEERTEKIAKFNSALSNAAIMIISHRAGRAGINLHS-ANRVILFDVDW 3893 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + +TR + G K V VY L+A+ T+++ + ++ TK + L++ Sbjct: 3894 NPAS-----DNQAITRAHRYGQKLPVVVYRLVARGTLEQRIYEKQVTKEVLSQRLVD 3945 >gi|311268976|ref|XP_003132292.1| PREDICTED: helicase ARIP4-like, partial [Sus scrofa] Length = 225 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 9/112 (8%) Query: 91 GRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + I ++N+ L + G+NL G N +V F W+ Sbjct: 4 STPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNL-IGANRVVVFDASWNP-----C 57 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V R + G K+ +Y L+A T+++ + R +K + D +++ L Sbjct: 58 HDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLN 109 >gi|146419456|ref|XP_001485690.1| hypothetical protein PGUG_01361 [Meyerozyma guilliermondii ATCC 6260] Length = 1103 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 73/207 (35%), Gaps = 26/207 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSAS---KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + E DL A + + ++ NG + + E+ ++ Sbjct: 881 YDGYDEEAIEDLFSPKSRAPEKFTSTDIISRLIEETNGFTPSTKIEKCIELVNQIRTKSL 940 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP 110 IIV F + ++ + +LD TI+ + +G Sbjct: 941 E-------EKIIVFSQFTTLFDLMKLVLDKKGIPFLRYDGSMSLDARNNTIKNFYQGLTQ 993 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + GL L N ++ +W+ +E + R + G +R VFV+ + Sbjct: 994 VLLISLRAGNVGLTLT-CANHVILMDPFWNP-----FVEEQAMDRAHRIGQQREVFVHRI 1047 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +TI+ +++ + K + L+ Sbjct: 1048 LLNDTIEGRIMELQKYKKEMVQNALDE 1074 >gi|169854907|ref|XP_001834125.1| hypothetical protein CC1G_08756 [Coprinopsis cinerea okayama7#130] gi|116504825|gb|EAU87720.1| hypothetical protein CC1G_08756 [Coprinopsis cinerea okayama7#130] Length = 922 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 51/165 (30%), Gaps = 19/165 (11%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPC 99 K+ L + I + S L R + Q ++ Sbjct: 731 SAKMLKLVEYLKEWDDTGDKTICYSQWTSMLDLLEKLLSRHGIRTLRFDGQMDRAAREYA 790 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 G ++ GLNL N +V L W+ E R + Sbjct: 791 ISSFKRAGGPKVMLISTRCGSVGLNL-VMANRIVNMDLSWNYAA-----ESQAYDRCHRI 844 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G + VFV L+ +NTI+E +L+ K + + L +H Sbjct: 845 GQDKDVFVKRLVVENTIEERMLRLQDVKVGLAEAALGEGSGAKLH 889 Score = 38.6 bits (88), Expect = 0.60, Method: Composition-based stats. Identities = 12/147 (8%), Positives = 32/147 (21%), Gaps = 15/147 (10%) Query: 2 KQYHKFQRELYCDLQGENIEA------FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y F++ L E ++ Q+ + + Sbjct: 361 EVYDSFEKSTKIRLNKFIRERTLLKNHAQVLVMILRLRQVCCHPHLVLSQAEGLDDPTAL 420 Query: 56 IK--ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI-------QEWNE 106 ++ A + + + + + D+D ++ Sbjct: 421 VQGNAEKELGRARKTMGPLWVADVKKEFLLRAASVESVDFSDEDDTAAPGCPVCGDVFSN 480 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILV 133 +L C + G I Sbjct: 481 DSGRVLSCKHEMCFDCMLNTRNGTITH 507 >gi|327352533|gb|EGE81390.1| DNA repair protein RAD16 [Ajellomyces dermatitidis ATCC 18188] Length = 983 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I+ + N + Sbjct: 821 KLRSKKQTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQRQKSIEHFMNNVDV 880 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 881 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 934 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + +N + E + Sbjct: 935 LCIEDSVESRMVLLQEKKANMIRGTINKDQSEALE 969 >gi|322487766|emb|CBZ23007.1| putative DNA excision/repair protein SNF2 [Leishmania mexicana MHOM/GT/2001/U1103] Length = 927 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 56/206 (27%), Gaps = 39/206 (18%) Query: 24 NSASKTVKCLQLANGAVY--YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA------- 74 N Q+ N DE H+ + I + A + VA Sbjct: 433 NPLLLLTMLSQICNHPWLSLLDETVAAALSHNPYKAPVAEIGDIFGGAKLWVALQLLLRC 492 Query: 75 --------------------YHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLF 113 + ++ ++ +N + + + Sbjct: 493 VSEQRKTLVFSRSKSLLHLLSFLLREWRLTHTQVDGDTPSERRCAEVERFNKDAGVWVCL 552 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G GL + +V W+ + V R + G +R V V+ L+ Sbjct: 553 LTTQVGGVGLTF-NAASAVVLLDPSWNPSA-----DAQAVDRVHRIGQRRDVVVFRLVTC 606 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALK 199 T++E V + K L ++K Sbjct: 607 GTVEEKVYRNQIFKRM---AALQSMK 629 >gi|169616788|ref|XP_001801809.1| hypothetical protein SNOG_11569 [Phaeosphaeria nodorum SN15] gi|160703265|gb|EAT81277.2| hypothetical protein SNOG_11569 [Phaeosphaeria nodorum SN15] Length = 1535 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 66/176 (37%), Gaps = 11/176 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + + D + +I + V F + Sbjct: 1214 RQSIAFPDKRLLQYDCGKLQ----RLATLLRDLQAGGHRALIFTQMTKVLDVLEQFLNIH 1269 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N + +I S G G+NL G + ++F+ L W+ Sbjct: 1270 GHRYLRLDGSTKVEQRQILTDRFNSDDRILCFILSSRSGGLGINLT-GADTVIFYDLDWN 1328 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +++ R + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1329 PA-----MDKQCQDRAHRIGQTRDVHIYKFVSEYTIEANILRKSNQKRLLDDVIIQ 1379 >gi|46123053|ref|XP_386080.1| hypothetical protein FG05904.1 [Gibberella zeae PH-1] gi|116090833|gb|ABJ55998.1| RING-11 protein [Gibberella zeae] Length = 1063 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 51/156 (32%), Gaps = 17/156 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW- 104 + L + + I+ F + L ++ T + +I+ + Sbjct: 897 VHELHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASIEHFM 956 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + + G LNL + + WW+ Q +R + G R Sbjct: 957 NNVDVECFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQTRP 1010 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + L +++++ ++ K+ + +NA K Sbjct: 1011 CTITRLCIEDSVESRMVLIQEKKTNMIHSTVNADDK 1046 >gi|194886128|ref|XP_001976555.1| GG19952 [Drosophila erecta] gi|190659742|gb|EDV56955.1| GG19952 [Drosophila erecta] Length = 1717 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 43/118 (36%), Gaps = 7/118 (5%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + + E+N + L + G+NL G N ++ F W+ Sbjct: 1056 YFRLDGSTSSQERERLVNEFNANSNVKLFLISTRAGSLGINLT-GANRVIIFDASWNP-- 1112 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G + FVY ++ +++ + R K + D +++ E Sbjct: 1113 ---CHDTQAVYRIYRYGQTKPCFVYRIVMDRCLEKKIYDRQIKKQGMSDRIVDECNPE 1167 >gi|290457487|emb|CBK19482.1| C. elegans protein Y116A8C.13b, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 720 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 72/214 (33%), Gaps = 46/214 (21%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKE-------------------------VHDEKIKAL 59 + S QLAN + K K+ AL Sbjct: 350 ALSLIFFARQLANHPKLLLDNLREKTEKSKAHKHSPLLLAFDGAHMPRGGVKESGKLTAL 409 Query: 60 EVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE- 106 +I+ ++ ++ L +Q+ + ++ +N+ Sbjct: 410 VDMIKCFRLLQECTVIVSNYIETLDMIQQLCEYLNFKVLRLDGKTQVPDRQKLVRTFNDH 469 Query: 107 -GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNL G + LV F W+ QQ + RI + G R Sbjct: 470 RDPSNIFLLSTKAGGVGLNL-IGASRLVLFDSDWNPANDQQAMARIW-----RDGQVRPC 523 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +Y LI TI+E +LQR K+ + +++A++ Sbjct: 524 HIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIE 556 >gi|159480254|ref|XP_001698199.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158273697|gb|EDO99484.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 797 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 24/225 (10%), Positives = 64/225 (28%), Gaps = 42/225 (18%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI---- 62 ++E + N + K Q+ N ++ + + Sbjct: 490 LKQEEMAR-ETRGRSLNNLIMQLRKVRQVCNHPDLITGAAS----DNQMYPPADELAAAC 544 Query: 63 -----------IEKANAAPIIVAYH-------------FNSDLARLQKAFPQGRTLDKDP 98 +A +++ + D + Sbjct: 545 GKLALLERLLTRLRAGGHRVLIFSQVSQMTEMLNVLEAYLEDRGIPAARLDGSVPWQQRM 604 Query: 99 CTIQEWNEGKI------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE--HQQMIER 150 I ++ G+ + + G G+NL + ++ + W+ + Sbjct: 605 TDIADFQVGQSGTAAAKDVFLLSTRAGGLGINLTA-ADTVIIYDSDWNPHQDSQHPPPPP 663 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G R V V+ L+ N++ +L R +K ++ +++ Sbjct: 664 QAMDRCHRIGQSRPVLVFRLVTANSVGCRMLARAESKKALERIVI 708 >gi|67624313|ref|XP_668439.1| DNA repair protein RAD54-like [Cryptosporidium hominis TU502] gi|54659648|gb|EAL38216.1| DNA repair protein RAD54-like [Cryptosporidium hominis] Length = 877 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 8/126 (6%) Query: 74 AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 DL ++ + ++ +N+ + G G+NL G N Sbjct: 543 FECLCRDLQVPCVRLDGSTSITRRHNLVKTFNDPNSNSFAFLLSSKAGGCGINL-IGANR 601 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 LV F W+ ++ + R + G K+ ++Y L + TI+E + QR K + Sbjct: 602 LVMFDPDWNPAN-----DKQALARVWRDGQKKNCYIYRLFSTGTIEEKIYQRQLCKDGLS 656 Query: 192 DLLLNA 197 +L+ + Sbjct: 657 AMLVTS 662 >gi|224371596|ref|YP_002605760.1| Helicase, Snf2 family [Desulfobacterium autotrophicum HRM2] gi|223694313|gb|ACN17596.1| Helicase, Snf2 family [Desulfobacterium autotrophicum HRM2] Length = 888 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 70/189 (37%), Gaps = 18/189 (9%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS 79 ++ ++ + N Y + + +++ + + N +++ + + Sbjct: 563 MDIRRIQVLLLRMRMVCNS-TYLIDRETHISPKLKELDNIIDELVVQNRRKMVIFSEWTT 621 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYG 128 + K K I E+ N + + + G GLNLQ Sbjct: 622 MTFLIAKHLSDMGIEFVELSGKVAVKKRQNLIDEFTNNPQCRVFL-STDAGGTGLNLQA- 679 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + +V F L W+ + Q I R+ Q + + V LIA+N+I+E +L ++ K+ Sbjct: 680 ADCVVNFELPWNPAKMNQRIGRVSRIGQA----SQCINVINLIAKNSIEERILAGIQLKT 735 Query: 189 TIQDLLLNA 197 + + + Sbjct: 736 DLFKGVFDD 744 >gi|242793561|ref|XP_002482189.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] gi|218718777|gb|EED18197.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] Length = 938 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 60/170 (35%), Gaps = 20/170 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLD--- 95 DE + KIKAL I+ + +V + S L ++ Sbjct: 744 VDEAETDASAPSSKIKALIQILTAKGQVEQTKTVVFSQWTSFLDIIEPHLTANDICFTRI 803 Query: 96 --------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +D + N+ K +L A C GLNL N +V WW Sbjct: 804 DGKLSSNKRDQAISEFTNDPKCTVLLASLNVCSVGLNLVA-ANQVVLCDSWWAPA----- 857 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 IE + R + G KR V+ L+ + ++++ VL K + L+ Sbjct: 858 IEDQAIDRVYRLGQKRETTVWRLVMEGSVEDRVLDIQAAKRELSSTALSE 907 Score = 35.1 bits (79), Expect = 5.5, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 14/54 (25%), Gaps = 9/54 (16%) Query: 1 MKQYHKFQRELYCDLQG---------ENIEAFNSASKTVKCLQLANGAVYYDEE 45 +K+Y FQ E L + ++ Q+ N Sbjct: 591 LKKYEMFQAEARGMLDKYKHQVGGANGGTTYSHVLEIFLRLRQVCNHWCLCKNR 644 >gi|145353728|ref|XP_001421157.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581393|gb|ABO99450.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1086 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 19/151 (12%) Query: 60 EVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NE 106 + + N IV + + + ++ + + + +Q + + Sbjct: 923 RDMRNQENGHLNKAIVFSQYTAMIEIVEWRLKKAKFTIAKLLGSMPVTQRAANLQAFRED 982 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + ++ S G GLNLQ N + WW+ V R + G R V Sbjct: 983 PNVSVILMSLKSGGEGLNLQA-ANYVYVLEPWWNPAVEM-----QAVMRAHRIGQLRPVT 1036 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +++ K + + ++ Sbjct: 1037 AVRFSTKGTIEERMMELQEKKQLVFEGCMDG 1067 >gi|145493367|ref|XP_001432679.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124399793|emb|CAK65282.1| unnamed protein product [Paramecium tetraurelia] Length = 1021 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 74/210 (35%), Gaps = 28/210 (13%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEE--------KHWKEVHDEKIKALEVIIEK--AN 67 + + ++ ++ + E + K+K L++ ++K Sbjct: 388 GVTTQKSLMNILIQLRKICQHLYMFPELEDRDQPSLGEHLIENSGKLKVLDMFLKKLYNE 447 Query: 68 AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAH 115 +I+ F S L ++ I+ + + Sbjct: 448 NHKVILFSQFTSLLDILEDYLNYRKYKYCRLDGSTPIEVRDENIRNFQNPDSDLFIFLLS 507 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+ L + ++ + ++ + Q + R + G K+ V VY LI Q+T Sbjct: 508 TRAGGLGITLTA-ADTVIIYDSDFNPQLDQ-----QAMDRAHRIGQKKNVMVYRLICQST 561 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++E +++R + K + ++++ + + + Sbjct: 562 VEEKIIERQQIKLRWEQMIIDKGHSQMVGM 591 >gi|326520307|dbj|BAK07412.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1148 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 65/206 (31%), Gaps = 20/206 (9%) Query: 9 RELYCDLQGENIEAFNS-ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-- 65 ++ ++G +++ N K + E E KI + ++ K Sbjct: 747 EDILEGMEGMDVKLDNKDMGMVEKMAMNLADMAHDGEALQVDEEVSCKIIFIMSLLRKLL 806 Query: 66 ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK-IPLLFA 114 ++V L +Q+ + + ++++ EG + Sbjct: 807 EEGHHVLVFSQTRKMLNLIQEAILLEGYKFLRIDGTTKIAERERIVKDFQEGPGAQIFLL 866 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G GL L ++ W+ Q ++R + G + V VY L+ Sbjct: 867 TTQVGGLGLTLTKAA-RVIVVDPAWNPSTDSQSVDR-----AYRIGQTKDVIVYRLMTSG 920 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKK 200 TI+E + + K + ++ Sbjct: 921 TIEEKIYKMQVLKGALFRTATEQKEQ 946 >gi|224145438|ref|XP_002325643.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222862518|gb|EEF00025.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 719 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 66/192 (34%), Gaps = 29/192 (15%) Query: 28 KTVKCLQLANGA---------VYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYH 76 ++ + Y+ K + L+ ++ + +++ Sbjct: 439 LMIQLRKNCYHPDLLESAFDGSYFYPPVEQIVGKCGKFQLLDRLLNRLFALQHKVLIFSQ 498 Query: 77 FNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLN 124 + L + F LD+ IQE+N+ + + G G+N Sbjct: 499 WTKILDIMDYYFSEKGFEVCRIDGSVKLDERKKQIQEFNDENSQFRIFLLSTRAGGLGIN 558 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + + + W+ + ++ + R + G + V VY L +++ +L+R Sbjct: 559 LTS-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTKPVHVYRLTTAQSVEGRILKRA 612 Query: 185 RTKSTIQDLLLN 196 +K ++ +++ Sbjct: 613 FSKLKLEHVVIG 624 >gi|254581362|ref|XP_002496666.1| ZYRO0D05346p [Zygosaccharomyces rouxii] gi|238939558|emb|CAR27733.1| ZYRO0D05346p [Zygosaccharomyces rouxii] Length = 1093 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 59/164 (35%), Gaps = 17/164 (10%) Query: 48 WKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDK 96 + +K+ + I +++ F L + + D+ Sbjct: 913 MQSGKIDKLCEILHHIIVEKKEKVLIFSLFTQMLDILELVLSTLNYKFLRLDGSTQVNDR 972 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + KIP+ + G G+NL N ++ F ++ + +R R Sbjct: 973 QSLIDKFYEDEKIPIFILSTKAGGFGINL-VCANNVIIFDQSFNPHD-----DRQAADRS 1026 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V + L+ +++I+E + Q + K + + KK Sbjct: 1027 HRVGQTKEVTITTLVTKDSIEEKIFQLAKNKLDLDFHVSEDDKK 1070 >gi|301100782|ref|XP_002899480.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4] gi|262103788|gb|EEY61840.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4] Length = 878 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 61/182 (33%), Gaps = 27/182 (14%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP 89 QL + + K L ++ +++ + L L+ Sbjct: 677 LRQL--------QLPMETLLASAKFDYLRTLLPNLQKDGHRVLIFSQWTKLLDLLEVLMS 728 Query: 90 QGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + I +N + I + + G G+NL + ++ L Sbjct: 729 HMEYRYLRLDGSTDVQERQGLIDTYNEDKNIFVFLLSTRAGGLGINLTA-ADTVILHDLD 787 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++ + R + G + V +Y L+++NT+D+ + + +K+ + +L+ L Sbjct: 788 FNPTA-----DEQACDRCHRIGQTKPVSIYKLVSENTVDQDIYKLGESKTELNHKILDKL 842 Query: 199 KK 200 Sbjct: 843 NA 844 >gi|189198415|ref|XP_001935545.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981493|gb|EDU48119.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 916 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 67/222 (30%), Gaps = 41/222 (18%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------------EEKHWKE 50 R ++ + + ++ N + E Sbjct: 605 RAATFEIAKRQLMQKKLGNPIMQLRLCCNSPYNFFNPFIKADTDGTETFASETEPDETIV 664 Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDP 98 K+ L+ ++ + +++ F + L L Sbjct: 665 STSGKMLLLDSLLPELIRRGHKVLIFSQFTTTLDLLGHYLDLRSWNYARIDGSVAQTDRQ 724 Query: 99 CTIQEWNEGKI-----PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N+ + + G G+NL + ++ F W+ ++ + + Sbjct: 725 EQILAFNKPSTTKEAADIFILSTRAGGQGINL-AAADTVILFDSDWNPQQ-----DLQAM 778 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V VY +NT+++ +L+ K ++ L++ Sbjct: 779 DRAHRIGQTRNVIVYRFATRNTVEQKLLESAEAKRRLEKLVI 820 >gi|322790286|gb|EFZ15285.1| hypothetical protein SINV_14493 [Solenopsis invicta] Length = 647 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 67/217 (30%), Gaps = 33/217 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 KQY ++ N + + N + Sbjct: 388 KQYADITDRNRDFF--IEVKTQNRFMLYKR---IVNHPHLVHCPLDDVGLPKVDDDLIKS 442 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPC 99 K+ L+ ++ K +++ L ++ + Sbjct: 443 SGKLLVLDAMLAKLKVQGHKVLLFSTMTMILDLIEDYLTLRDYNYVRLDGSTAIETRKKN 502 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + N+ L S G GLNL + ++ + W+ + + + R + Sbjct: 503 INKFNNDPDTFLFLISTRSGGVGLNLMS-ADTVIIYDSDWNPQA-----DIQAMARCHRI 556 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V VY L + TIDE +++R K ++ ++++ Sbjct: 557 GQTKPVVVYRLCTRGTIDEAIIKRAEGKRILEKMVIS 593 >gi|219362507|ref|NP_001136611.1| hypothetical protein LOC100216734 [Zea mays] gi|194696362|gb|ACF82265.1| unknown [Zea mays] Length = 356 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 52/142 (36%), Gaps = 17/142 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 IV + L L+ + + ++++N + ++ ++ + Sbjct: 203 KAIVFSQWTGMLDLLELSLNINCIQYRRLDGTMSLNLREKNVKDFNTDPEVRVMIMSLKA 262 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E V R + G R V V L ++T+++ Sbjct: 263 GNLGLNMVSACH-VILLDLWWNP-----YAEDQAVDRAHRIGQTRPVTVSRLTVKDTVED 316 Query: 179 LVLQRLRTKSTIQDLLLNALKK 200 +L K T+ + K Sbjct: 317 RILALQEEKRTMVNSAFGDDKA 338 >gi|302813632|ref|XP_002988501.1| hypothetical protein SELMODRAFT_427193 [Selaginella moellendorffii] gi|300143608|gb|EFJ10297.1| hypothetical protein SELMODRAFT_427193 [Selaginella moellendorffii] Length = 950 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 61/168 (36%), Gaps = 23/168 (13%) Query: 51 VHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 KI AL ++EK +V F++ L ++ + G + K Sbjct: 773 KPSAKINALVSMLEKTRAKDPNIKSVVFSQFSTMLKLIEGPLQKAGFKFVKLEGGMSASK 832 Query: 97 DPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + G + + G GLNL + + WW+ +E + Sbjct: 833 REENMEAFKSTRSGSPTVFLLSLKAAGVGLNLVT-ASNVFMMDPWWNPA-----VEEQAM 886 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R V V+ LIA ++I+E +LQ K + L E Sbjct: 887 DRVHRLGQTRDVHVFRLIATDSIEERLLQVQEKKRAYAQIALGKEASE 934 Score = 35.1 bits (79), Expect = 5.4, Method: Composition-based stats. Identities = 4/47 (8%), Positives = 13/47 (27%), Gaps = 6/47 (12%) Query: 3 QYHKFQRELY----CDLQGENIEAFNS--ASKTVKCLQLANGAVYYD 43 Y K +++ L + + ++ Q+ + Sbjct: 607 LYDKMEKDGRNMIRRFLDNGTVTKNYAVVLQMILRLRQICDHTSMCP 653 >gi|239607541|gb|EEQ84528.1| DNA repair protein RAD16 [Ajellomyces dermatitidis ER-3] Length = 948 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I+ + N + Sbjct: 786 KLRSKKQTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQRQKSIEHFMNNVDV 845 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 846 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 899 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + +N + E + Sbjct: 900 LCIEDSVESRMVLLQEKKANMIRGTINKDQSEALE 934 >gi|155371796|ref|YP_001427330.1| hypothetical protein ATCV1_Z849R [Acanthocystis turfacea Chlorella virus 1] gi|155125116|gb|ABT16983.1| hypothetical protein ATCV1_Z849R [Acanthocystis turfacea Chlorella virus 1] Length = 456 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 68/216 (31%), Gaps = 27/216 (12%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAV----YYDEEKHWKEVH 52 K Y + G++ ++ Q G + YYD+ + E Sbjct: 223 KAYTDTLDDGRAVFAAYGAYGDSQARMEVLKIILRLRQ-CTGNINMVPYYDDPDTFYEGE 281 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTI 101 K+K +E I + I+ HF+ ++ + Sbjct: 282 STKLKMMEEDILNSPMQKTIIFTHFHKEMDYIAAMLKSHGFASVRLDGRVSAKGRISSVE 341 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N+ + L + G GLNLQ + S+ W+ E + R + G Sbjct: 342 SFNNDPECNFLLVQIDAGGVGLNLQ-VAKRIYITSVHWN-----GTAEIQAIARSYRIGQ 395 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V LI +T+D+ ++ + K LL Sbjct: 396 DSQVTVKRLIINDTVDDAIVGIQQQKLECAAELLED 431 >gi|320164497|gb|EFW41396.1| stretch responsive protein 278 [Capsaspora owczarzaki ATCC 30864] Length = 958 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 64/180 (35%), Gaps = 24/180 (13%) Query: 31 KCLQ--LANGAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQK 86 + L+ L+N + E K+K L ++ +AN +++ L ++K Sbjct: 697 RLLKTFLSNSPLAVTETADT----SGKLKILLTLLQYYEANGDKVLIFCSSTRMLRIIEK 752 Query: 87 AFPQGRTL---------DKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFS 136 + + ++ + K + G GLNL N+++ F Sbjct: 753 IVMPRYNYLLLDGATSAMQRQVLVDKFQQDKSKFLFLISTRAGGVGLNLTA-ANVVIVFD 811 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ R + G R V V L++Q +I+E + R K + ++ L Sbjct: 812 PSWNPASDM-----QAQDRAFRIGQLRDVAVNRLMSQASIEEQIYGRQVYKQHLGNMALE 866 >gi|302665258|ref|XP_003024241.1| hypothetical protein TRV_01591 [Trichophyton verrucosum HKI 0517] gi|291188288|gb|EFE43630.1| hypothetical protein TRV_01591 [Trichophyton verrucosum HKI 0517] Length = 1143 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + ++ K+ L +++ N I+V F + Sbjct: 949 KNKEWMNSGKVDKLCELLDNYIANGDRILVFSQFTMVMDILEQVLETQKIKFFRLDGKTS 1008 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 1009 VEDRQSILDAFHEQVDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDIQA 1062 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1063 ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 1104 >gi|325179496|emb|CCA13893.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 1697 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 71/252 (28%), Gaps = 67/252 (26%) Query: 2 KQYHKFQRELYCDLQGENI---------EAFNSASKTVKCLQLANGAVYYDEEKHWKEV- 51 K Y ++ +L +I + + ++ + + + Sbjct: 1380 KLYQHIRQ---AELSNSSIRPLQTTSSHKIAGVFQQLQLLQKICIHPNLIISSQKHQHLN 1436 Query: 52 -----------------HDEKIKALEVIIEKANA------------------APIIVAYH 76 H K AL ++ A ++ H Sbjct: 1437 LLELVDTKTRSSMADWRHSGKFTALRDLLHDACGFSSDDNDQDETEPSLSPTHRCLIFSH 1496 Query: 77 FNSDLARLQKAFPQGRTLDK-------------DPCTIQEWNEGKIPLLFAHPASCGHGL 123 L ++ F + + I +L + G GL Sbjct: 1497 LQETLDYVEHMFEECFPRLTYTRLRSTLTNSVFHEKCRNFNEDPSIDILLLTTSIGGLGL 1556 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 L G + ++F W+ ++ + R + G ++V V+ LI QNT++E +L Sbjct: 1557 TLT-GADTVIFLEHSWNP-----FVDLQAMDRAHRLGQTKSVRVFRLIMQNTLEEEILNL 1610 Query: 184 LRTKSTIQDLLL 195 K + ++ Sbjct: 1611 QSFKQQVASSVI 1622 >gi|256078496|ref|XP_002575531.1| chromodomain helicase DNA binding protein [Schistosoma mansoni] gi|238660772|emb|CAZ31764.1| chromodomain helicase DNA binding protein, putative [Schistosoma mansoni] Length = 1825 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 23/203 (11%), Positives = 60/203 (29%), Gaps = 33/203 (16%) Query: 29 TVKCLQLANGAVYYDEEKHWKE-------------VHDEKIKALEVIIE--KANAAPIIV 73 ++ + N A + K L+ +++ K+ +++ Sbjct: 751 VMELKKCCNHAHLIAPPSEVDQQYLTKEDRLRSFLKGSGKGTLLDKLLQRLKSKGHRVLI 810 Query: 74 AYHFNSDLAR---------LQKAFPQGRTLDK-DPCTIQEWNEGKI--PLLFAHPASCGH 121 L G + + +N + G Sbjct: 811 FSQMVRMLDLIADYLSLRGWGFQRLDGSIRGEVRKQALDHFNCEGSTDFCFLLSTRAGGL 870 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL + ++ F W+ + + R + G + V VY + + +++E ++ Sbjct: 871 GINL-ATADTVIIFDSDWNPQN-----DLQAQARAHRIGQTKQVSVYRFVTRESVEEKII 924 Query: 182 QRLRTKSTIQDLLLNALKKETIH 204 + K + L++ + I Sbjct: 925 ESATRKMVLDHLVIQRMDSAGIR 947 >gi|119176940|ref|XP_001240322.1| hypothetical protein CIMG_07485 [Coccidioides immitis RS] gi|303316255|ref|XP_003068132.1| DNA repair protein RAD16, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107808|gb|EER25987.1| DNA repair protein RAD16, putative [Coccidioides posadasii C735 delta SOWgp] Length = 927 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 54/155 (34%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ + T + +I + N ++ Sbjct: 765 KLRSKKQTHKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMTPVQRQKSIDYFMNNVEV 824 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 825 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITK 878 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + +N + E + Sbjct: 879 LCIEDSVESRMVLLQEKKANMINGTINKDQSEALE 913 >gi|169806094|ref|XP_001827792.1| SWF-SNF family helicase [Enterocytozoon bieneusi H348] gi|161779078|gb|EDQ31104.1| SWF-SNF family helicase [Enterocytozoon bieneusi H348] Length = 823 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 64/157 (40%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 + K+K L+ ++ + N +++ + + ++ + + + Sbjct: 666 NSGKLKVLDDLLVQLNKGNHRVLIYFQMTRMMDLFEEFLIEKQYSYLRLDGTCKVSQRKE 725 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + W + + + G GLNL + ++F+ W+ +++ + R + Sbjct: 726 LVNLWQNTDRHFIFMLSTRAGGVGLNLTA-ADTVIFYDSDWNPT-----VDQQAMDRVYR 779 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY LI + TI+E +++ K +Q L++ Sbjct: 780 LGQTKDVTVYRLITKGTIEERIMEMAEKKGEMQKLVI 816 >gi|303280531|ref|XP_003059558.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459394|gb|EEH56690.1| predicted protein [Micromonas pusilla CCMP1545] Length = 553 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSL 137 DL + ++++N G ++ + G GLNL G + L+ F Sbjct: 446 RDLGLPADRLDGRVPPNARSGLVRDFNRGSGGRVMLLSCVAGGAGLNL-VGASRLILFDT 504 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 W+ +R + R + G R V +Y L+A T++E V QR K Sbjct: 505 SWNPAH-----DRQAMARVWRDGQTRPVTIYRLLAAGTVEEKVFQRQLMKHK 551 >gi|294867966|ref|XP_002765317.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] gi|239865330|gb|EEQ98034.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] Length = 1182 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 56/158 (35%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQ 102 D I + + + A +V F L Q L I+ Sbjct: 1011 DALITRVLEMRRQDPNAKGLVFSCFVKLLELSQYHLKARGISTFIIHGSIPLAVRTRIIR 1070 Query: 103 EW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + LL ++ G GLNLQ + + WW+ +E+ + R + Sbjct: 1071 AFIESPASDCSLLLVSISAGGEGLNLQR-ASHVFILDPWWNPA-----VEKQAIQRCHRL 1124 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G ++ V ++LI++NTI+E + K I D + Sbjct: 1125 GQQQIVRSHHLISENTIEERIKALQEKKQLIFDGTIGG 1162 >gi|58262112|ref|XP_568466.1| hypothetical protein CNM01240 [Cryptococcus neoformans var. neoformans JEC21] gi|134118355|ref|XP_772191.1| hypothetical protein CNBM1100 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254799|gb|EAL17544.1| hypothetical protein CNBM1100 [Cryptococcus neoformans var. neoformans B-3501A] gi|57230639|gb|AAW46949.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 842 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 22/167 (13%) Query: 53 DEKIKALEVIIEKA-----NAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDK 96 KI+ L ++ + N IV F S L + R + Sbjct: 636 SAKIRMLLKLLSEIDEKSGNKEKTIVFSQFTSFLDLVEPFLKENNIKYVRYDGSMRNDHR 695 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ K ++ + GLNL N ++ LWW+ E R Sbjct: 696 QVSLAKIRDDPKTRVILISFKAGSTGLNLT-CCNNVILMDLWWNPAL-----EDQAFDRA 749 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G K V ++ L + T+++ +L +K + + L+ + + Sbjct: 750 HRLGQKLDVNIWKLTIEETVEDRILILQNSKRELANAALSGQTGKGV 796 >gi|325179497|emb|CCA13894.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 1696 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 71/252 (28%), Gaps = 67/252 (26%) Query: 2 KQYHKFQRELYCDLQGENI---------EAFNSASKTVKCLQLANGAVYYDEEKHWKEV- 51 K Y ++ +L +I + + ++ + + + Sbjct: 1379 KLYQHIRQ---AELSNSSIRPLQTTSSHKIAGVFQQLQLLQKICIHPNLIISSQKHQHLN 1435 Query: 52 -----------------HDEKIKALEVIIEKANA------------------APIIVAYH 76 H K AL ++ A ++ H Sbjct: 1436 LLELVDTKTRSSMADWRHSGKFTALRDLLHDACGFSSDDNDQDETEPSLSPTHRCLIFSH 1495 Query: 77 FNSDLARLQKAFPQGRTLDK-------------DPCTIQEWNEGKIPLLFAHPASCGHGL 123 L ++ F + + I +L + G GL Sbjct: 1496 LQETLDYVEHMFEECFPRLTYTRLRSTLTNSVFHEKCRNFNEDPSIDILLLTTSIGGLGL 1555 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 L G + ++F W+ ++ + R + G ++V V+ LI QNT++E +L Sbjct: 1556 TLT-GADTVIFLEHSWNP-----FVDLQAMDRAHRLGQTKSVRVFRLIMQNTLEEEILNL 1609 Query: 184 LRTKSTIQDLLL 195 K + ++ Sbjct: 1610 QSFKQQVASSVI 1621 >gi|226289343|gb|EEH44855.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb18] Length = 899 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I+ + N + Sbjct: 737 KLRSKKQTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQRQKSIEHFMNNVDV 796 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 797 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 850 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + +N + E + Sbjct: 851 LCIEDSVESRMVLLQEKKANMIRGTINKDQSEALE 885 >gi|222637121|gb|EEE67253.1| hypothetical protein OsJ_24412 [Oryza sativa Japonica Group] Length = 953 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTI 101 D + + ++E +A IV F S L ++ + + ++K Sbjct: 785 DALREEIRNMVEHDGSAKGIVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEKGKAID 844 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N+ + + G LNL + + WW+ +E R + G Sbjct: 845 TFTNDPDCRIFLMSLKAGGVALNLT-VASHVFLMDPWWNPA-----VESQAQDRIHRIGQ 898 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + ++T++E +LQ K + + + Sbjct: 899 FKPIRSMRFVIKDTVEERILQLQEKKRLVFEGTVGD 934 >gi|298710909|emb|CBJ49262.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1332 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 61/161 (37%), Gaps = 20/161 (12%) Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTI 101 K+K+LE ++ K + ++V + L + + + + I Sbjct: 875 GKMKSLETLLAKFHETRDKVLVFSWSTAMLDVLESFVGAKGYVYRRLDGTTSSKERQARI 934 Query: 102 QEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 E+N + + + + G GLNL + +V + + W+ R + Sbjct: 935 NEFNSDRAGVFVFLISTRAGGQGLNLHT-ASRVVLYDVNWNPALGL-----QAQDRAYRI 988 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G KR V V+ LI++ TI+E+ R K I + + Sbjct: 989 GQKRKVAVFRLISKGTIEEMCYMRQIYKLQITSAAMGDQAR 1029 >gi|322711766|gb|EFZ03339.1| SWI/SNF family DNA-dependent ATPase Ris1, putative [Metarhizium anisopliae ARSEF 23] Length = 783 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 65/189 (34%), Gaps = 23/189 (12%) Query: 28 KTVKCLQLANGAVY--YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 K+++ N Y Y + K+ ++ + I+ + L Sbjct: 582 KSLRLEAAKNHKAYKRYMTYLRKTWMPAAKVTECMKLLREIRETGEKTIIFSQWTLLLDL 641 Query: 84 LQKAFPQ------------GRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGN 130 L+ A T ++ + + + + ++ + GLNL + Sbjct: 642 LEVAMWHEQFPEKPIRYDGSMTGEERSKAAKAFRDLPECNVMLVSLRAGNAGLNLTA-AS 700 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ +W+ IE + R + G + V VY ++ Q T+++ ++ K I Sbjct: 701 RVIIMDPFWNP-----YIEMQAIDRTYRIGQPKEVEVYRILTQETVEDRIVALQNKKKEI 755 Query: 191 QDLLLNALK 199 + L+ + Sbjct: 756 VEAALDETE 764 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 4/50 (8%), Positives = 13/50 (26%), Gaps = 6/50 (12%) Query: 4 YHKFQRELYC----DLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKH 47 Y + + + L+ ++ N ++ Q + Sbjct: 342 YKQLEEKAQVVFSKYLREGSVGKNYSNILVLLLRLRQACCHPHLNLDVDD 391 >gi|196008026|ref|XP_002113879.1| hypothetical protein TRIADDRAFT_27056 [Trichoplax adhaerens] gi|190584283|gb|EDV24353.1| hypothetical protein TRIADDRAFT_27056 [Trichoplax adhaerens] Length = 871 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 23/219 (10%), Positives = 66/219 (30%), Gaps = 33/219 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------- 52 Y + L + + ++ ++ + N + Sbjct: 519 YKYILTRNFEALNSRGNKHVSLSNIVMELKKCCNHPYLIPSASEDAPTNIDGTYHLSPLV 578 Query: 53 --DEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDP 98 K+ LE +++K +++ L + + ++ Sbjct: 579 QACGKLIVLEKMLKKLKETGNRVLIFSQMTKMLDILEDFLDGLNYEYERIDGSTSGNERQ 638 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I ++N + G G+NL + ++ + W+ + +R Sbjct: 639 ALIDKFNAPNATQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAFSRA 692 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G V +Y + + +++E + Q + K + L++ Sbjct: 693 HRIGQSNKVMIYRFVTRFSVEERITQVAKKKMMLTHLIV 731 >gi|116197985|ref|XP_001224804.1| hypothetical protein CHGG_07148 [Chaetomium globosum CBS 148.51] gi|88178427|gb|EAQ85895.1| hypothetical protein CHGG_07148 [Chaetomium globosum CBS 148.51] Length = 969 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 + L + + I+ F + L ++ + T + +IQ + Sbjct: 803 VHELHKLRSDNASHKSIIFSQFTTMLQLIEWRLHRAGITTVMLDGSMTPAQRQASIQHFM 862 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G LNL + + WW+ Q +R + G R Sbjct: 863 TNVNVEVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQTRP 916 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + L +++++ ++ K+ + + +NA Sbjct: 917 CTITRLCIEDSVESRMVLLQEKKTNMINSTINA 949 >gi|322492369|emb|CBZ27643.1| putative DNA repair protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1092 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAF----------P 89 + K +H K+ A+ IEK ++V F L Q Sbjct: 911 IFARLDPQKPLHGTKLDAIANYIEKVPKDEKVVVFSQFGGMLDLTQYWLQRRSIRAVKLC 970 Query: 90 QGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 TL + +Q + +E + ++ + G GLNLQ N +V WW+ Sbjct: 971 GSLTLTQRQSVLQAFLHEQSVRVILISLKAGGEGLNLQ-VANHVVLTDPWWNPAVEM--- 1026 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V R + G R V + +++++E ++ K + + ++ Sbjct: 1027 --QAVQRAHRIGQTRPVHAVRFVTEHSVEERMVDLQDKKMLVFEGTIDG 1073 >gi|114658983|ref|XP_001170738.1| PREDICTED: chromodomain helicase DNA binding protein 2 isoform 7 [Pan troglodytes] Length = 1777 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 65/201 (32%), Gaps = 38/201 (18%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 KQY+K R +G + ++ + N + + + Sbjct: 726 KQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENER------ENG 779 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI--PLLFAHPA 117 + I+ + + + + +N Sbjct: 780 QEILLRLDG----------------------SIKGEIRKQALDHFNADGSEDFCFLLSTR 817 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + +V F W+ + + R + G K+ V +Y L+ + T++ Sbjct: 818 AGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQARAHRIGQKKQVNIYRLVTKGTVE 871 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 E +++R + K + L++ + Sbjct: 872 EEIIERAKKKMVLDHLVIQRM 892 >gi|328874980|gb|EGG23345.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 937 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 64/169 (37%), Gaps = 21/169 (12%) Query: 44 EEKHWKEVHDEKIKALEVII---EKANAAPIIVAYHFNSDLA----------RLQKAFPQ 90 K ++ + K++ ++ ++ K + +++ ++ L Sbjct: 619 NPKVFQPQYSGKLQFVDKLLAGIRKTSKDRVVIISNYTQTLTVLAGMMRTRGYEFFQLDG 678 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++D + +N+ + + G GLNL G N LV + W+ Sbjct: 679 STSVDNRQKMVDLFNDPSRNEFVFLLSSKAGGVGLNL-IGANHLVLYDPDWNPAN----- 732 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ V +Y ++ TI+E + QR TK + ++ Sbjct: 733 DLQAMARVWREGQKKVVSIYRTLSTGTIEEKIFQRQITKMALSTSVVEG 781 >gi|295661927|ref|XP_002791518.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb01] gi|226280075|gb|EEH35641.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb01] Length = 910 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I+ + N + Sbjct: 748 KLRSKKQTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQRQKSIEHFMNNVDV 807 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 808 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 861 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + +N + E + Sbjct: 862 LCIEDSVESRMVLLQEKKANMIRGTINKDQSEALE 896 >gi|224093501|ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222852831|gb|EEE90378.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1108 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 63/203 (31%), Gaps = 31/203 (15%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEV 61 + L E++ + E ++E H KI + Sbjct: 710 EDLLEGMESMLNPEDVAVAEKLAM---------HVADVAERTDFQEKHDSISCKISFVLS 760 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK- 108 +++ +++ L +++ + + ++ EG Sbjct: 761 LLDNLIPEGHNVLIFSQTRKMLNLIEESLVSNGYEFLRIDGTTKVTDRAKIVDDFQEGNG 820 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P+ G GL L + ++ W+ Q ++R + G K+ V VY Sbjct: 821 APIFLLTSQVGGLGLTLTK-ADRVIVVDPAWNPSTDNQSVDR-----AYRIGQKKDVVVY 874 Query: 169 YLIAQNTIDELVLQRLRTKSTIQ 191 L+ T++E + ++ K + Sbjct: 875 RLMTCGTVEEKIYRKQIFKGGLF 897 >gi|321251541|ref|XP_003192100.1| DNA repair protein RAD16; Rad16p [Cryptococcus gattii WM276] gi|317458568|gb|ADV20313.1| DNA repair protein RAD16; Rad16p [Cryptococcus gattii WM276] Length = 1202 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 66/155 (42%), Gaps = 18/155 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQE 103 ++ LE + ++ A +V F S L ++ F + + TI+E Sbjct: 1025 AMLRQLEEMRQQDPKAKALVFSQFTSFLDLIETTLTKQGIRWLRFDGTMSQAQRASTIEE 1084 Query: 104 W--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + +L + G GLNL N + WW+ QQ I+R+ + G Sbjct: 1085 FGRKTNEPLILLISLKAGGVGLNLT-MANYVFLMDTWWNEAIEQQAIDRV-----HRLGQ 1138 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V+V I + T+++ +++ R+K+ + + L+ Sbjct: 1139 NKPVYVTRYIIKGTVEKRIMKIQRSKTALVNASLS 1173 >gi|301060130|ref|ZP_07200997.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] gi|300445642|gb|EFK09540.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] Length = 691 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 72/201 (35%), Gaps = 30/201 (14%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 R+ L + + + + +L H K L ++ K + Sbjct: 446 VRKTLLKLSRHDGVDSDLKKEMARLAKLC-----------DYVPHTSKTTRLLELL-KVS 493 Query: 68 AAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 ++V F + L + F G ++ + G P++ Sbjct: 494 GEKVLVFSRFTATLEEIARRLSEEKVAYSLFHGGMGAADKDRAVESFQNG-TPVMLCS-E 551 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G NLQ+ ++ F L W+ + +Q I RI + G R V VY L A NT + Sbjct: 552 IGGEGRNLQFCATMVN-FDLPWNPMKIEQRIGRI-----HRIGQTRPVHVYNLCADNTAE 605 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 +L+ L + + +L++ + Sbjct: 606 HHILEVLDRRINLFELVIGEV 626 >gi|241954006|ref|XP_002419724.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] gi|223643065|emb|CAX41939.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 1102 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 63/202 (31%), Gaps = 22/202 (10%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--KHWKEVHDEKIKALEVII----EK 65 +Q ++ + ++ + E + KI +I K Sbjct: 882 MLHIQKLDMSQVHKFCSQHYQHKIKSNQALIREFIKRDNGFESSAKIHKCVEMILDLFSK 941 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLLFAH 115 +IV F S + I+E+ + +L Sbjct: 942 NPGEKVIVFSQFTSLFDLMALVLQNQHIEFLRYDGTMSMDVKNNVIKEFYQSNKNVLLLS 1001 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + GL L N ++ +W+ +E + R + G R VFV+ ++ T Sbjct: 1002 LRAGNAGLTLT-CANHVIIMDPFWNP-----FVEEQAMGRAHRIGQTREVFVHRVLIAGT 1055 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 ++ +++ +K + + L+ Sbjct: 1056 VENRIMELQESKKHLINSALDE 1077 Score = 35.1 bits (79), Expect = 5.9, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 48/171 (28%), Gaps = 10/171 (5%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI-----KALE 60 + Q+ L A + + ++ Q + + ++ +V D + Sbjct: 714 RVQKAAKKILGEHTKNAP-ALTLLLRLRQACCHSYLVEIGEYKAKVKDSEADASFSNFKL 772 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 N A + + + +G + C + N L G Sbjct: 773 DWRSMVNNARDLKESAKQQVHSLIDALNGRGFDENTLACPVCFDNIDIESSLLI----FG 828 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 ++ G FF EE + RIG + Q K YLI Sbjct: 829 ECGHVICKGCCNTFFENCNVGEEDDESPYRIGECKDCQKTVKEHNITEYLI 879 >gi|156093697|ref|XP_001612887.1| helicase [Plasmodium vivax SaI-1] gi|148801761|gb|EDL43160.1| helicase, putative [Plasmodium vivax] Length = 1618 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 80/248 (32%), Gaps = 59/248 (23%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---VHDEKIK 57 Y + + + + + +I + + ++ ++ N + +E + E K + Sbjct: 962 LYRQIEMKGFTQINRNDGSISNKSCQNMVMQLRKVVNHPYLFLQEYNIDEYLIKCSGKFE 1021 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 L+ ++ K ++ + L +L + I+++N Sbjct: 1022 VLDRMLPKLLRFRHKTLIFSQMTKLMDVLCDYLDFRGHRFLRLDGNSSLHERRRIIEQFN 1081 Query: 106 ------------------------------------EGKIPLLFAHPASCGHGLNLQYGG 129 + + S GLNLQ Sbjct: 1082 RVDGGSGEAGGAEDGSCAGDNPLHLADSPLGEPNGGHDETMIFMLSTRSGSLGLNLQT-A 1140 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ F ++ + + + R + G K V V+ I + ++EL+ QR + K T Sbjct: 1141 DTVIIFDSDFNPHQ-----DIQAMCRCHRIGQKNVVKVFRFITLSGVEELIFQRAQDKLT 1195 Query: 190 IQDLLLNA 197 I D ++ A Sbjct: 1196 INDKVIQA 1203 >gi|83770000|dbj|BAE60135.1| unnamed protein product [Aspergillus oryzae] Length = 774 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 65/198 (32%), Gaps = 32/198 (16%) Query: 29 TVKCLQLANGAVYY-------DEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFN 78 ++ + + E + K L +++ II+ +FN Sbjct: 396 LMELRKCSIHPYLLDDAIPDPYELGAHVITNSGKYIVLLKMVQHFVLERGRKIIIFSNFN 455 Query: 79 S----------------DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 D R + ++ N+ + + + G G Sbjct: 456 QALNLCEDLLLTIQKNGDPVRYVRLDGSTSNARRNLSIYLFQNDPRYMVFLISIRAGGEG 515 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + ++F W+ + + R R + G K V ++ L ++ T++E + + Sbjct: 516 LNLVS-SSTVIFLDEDWNPQ-----VMRQAEARVHRIGQKHPVRIFKLQSKGTVEEQISR 569 Query: 183 RLRTKSTIQDLLLNALKK 200 R+ K+ + ++ + Sbjct: 570 RIVKKAYVATKIMEDINA 587 >gi|304360695|ref|YP_003856826.1| putative helicase [Clostridium phage phiCTP1] gi|302495554|gb|ADL40334.1| putative helicase [Clostridium phage phiCTP1] Length = 570 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 77/210 (36%), Gaps = 20/210 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y+ + DL + + N ++ + Q+ + Y + + K+ LE Sbjct: 361 KIYNSVLNSVKDDL-DKITTSNNPLAQLTRLRQVTD----YTGLVSERVLESAKLDRLEE 415 Query: 62 IIE--KANAAPIIVAYHF-------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 +I+ AN I+ ++ L R A+ G+ + D + N+ ++ Sbjct: 416 LIDTINANGKKTIIFSNWEKVTQEVKKRLIRFNPAYITGKVKNIDDEVQKFQNDDSCKII 475 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL L + ++F W+ R + G V + L+ Sbjct: 476 IGTIGAMGTGLTLTA-ASYVIFLDEPWNRALKD-----QAEDRAYRIGTNSTVSIITLLC 529 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 NTID V + ++ K D+L++ + Sbjct: 530 NNTIDVKVHELVKQKGQYSDVLVDGKVNKM 559 >gi|262066952|ref|ZP_06026564.1| SWF/SNF family helicase [Fusobacterium periodonticum ATCC 33693] gi|291379300|gb|EFE86818.1| SWF/SNF family helicase [Fusobacterium periodonticum ATCC 33693] Length = 896 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 77/193 (39%), Gaps = 20/193 (10%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAY 75 + F + + + E + K + +K +E +IE N +++ Sbjct: 697 QGTFDKFFVLQAINELRHIVSSP----ELDNNKIISSKKEVLIENVIEAIENNHKVLIFV 752 Query: 76 HFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 ++ S + +++ G+T D+ + ++ + + + G GLNL Sbjct: 753 NYLSSIESICNSLKENKIKFLKMTGQTKDRQSLVDKFQSDDRYKVFVMTLKTGGVGLNLV 812 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + + WW+ + +E + R + G + VF Y +I +NTI+E +L+ Sbjct: 813 S-ADTIFIYDPWWN-----KTVENQAIDRAYRLGQDKTVFAYKMIMRNTIEEKILKLQEI 866 Query: 187 KSTIQDLLLNALK 199 K + D L++ Sbjct: 867 KDKLLDDLISEDN 879 >gi|328868273|gb|EGG16651.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1147 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 18/169 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQ--------- 90 + + + K + L +I + I+V L L+ F Sbjct: 942 KFIIPEEFISQSSAKCQKLVELINQHKDKSKILVFSQMTRVLDILEDVFDHVGLEFTRLD 1001 Query: 91 -GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + I + N I + + G G+NL NI++F+ + ++ + + Sbjct: 1002 GSTPVTERQDIIDHFTNTDDIRVFLLSTLAGGLGINL-ISANIVIFYDMSFNPQ-----V 1055 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R R + G + V VY LI ++D +L +K + D +L Sbjct: 1056 DRQAEDRAHRLGQTKEVTVYKLITNGSVDNYMLDLSNSKKRLNDSMLEE 1104 >gi|239609713|gb|EEQ86700.1| DNA excision repair protein [Ajellomyces dermatitidis ER-3] Length = 1026 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 17/171 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 QL + + K+ + +N ++V H L LQ F Sbjct: 595 RQLYATRDSILNYANHEFCGKWKVLKKLLRWWHSNGDKVLVFSHSVRLLKMLQMLFKHTS 654 Query: 91 --------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + D + +N + + + + G GLN+ N +V W+ Sbjct: 655 YNVSYLDGAMSYDDRTKAVDSFNADPREFVFLISTRAGGVGLNITS-ANKVVVVDPNWNP 713 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R V V+ L++ TI+E+V R K + Sbjct: 714 A-----YDLQAQDRAYRIGQSRDVEVFRLVSAGTIEEIVYARQIYKQQQAN 759 >gi|242010568|ref|XP_002426037.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212510047|gb|EEB13299.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 853 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 19/165 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK--- 96 E K + V K + L+ ++ K +++ F L + +G + Sbjct: 657 YELKDEEFVKSGKFQKLDEMLPKLKEENHRVLIFSQFVIMLDVMEEYLRIRGHKYLRLDG 716 Query: 97 ------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I +N + I + + G G+NL + ++ + ++ + Sbjct: 717 STQVIIRQELIDAFNEDSSIFVFILSTRAGGLGINLTA-ADTVIIHDMDFNP-----YND 770 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + R + G + V VY I +NTI+E + Q K ++ + Sbjct: 771 KQAEDRCHRVGQTKPVSVYKFIGKNTIEENIHQVALEKLNLEKKI 815 >gi|168015457|ref|XP_001760267.1| SNF2 superfamily RAD5 protein [Physcomitrella patens subsp. patens] gi|162688647|gb|EDQ75023.1| SNF2 superfamily RAD5 protein [Physcomitrella patens subsp. patens] Length = 1031 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 59/167 (35%), Gaps = 19/167 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 K+ AL +E+ + A +V + + L L+ F + + + Sbjct: 863 DSCKVNALMNELEELRPSGAKSVVFSQWTAFLDLLEIPFKRKKIKFVRLDGSLSQQQREK 922 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ I ++ + G G+NL + WW+ +Q I RI + Sbjct: 923 VLNDFRSQSDIMVMLISLKAGGVGINLTT-ASNAFLLDPWWNPAVEEQAIMRI-----HR 976 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G + V V I + +++E + K + LN + + Sbjct: 977 IGQTKDVQVKRFIVKGSVEEKMQAVQARKQRMIAGALNNQEVRVARI 1023 Score = 44.4 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 18/159 (11%), Positives = 39/159 (24%), Gaps = 25/159 (15%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K + + ++ + + ++ Q + + D A Sbjct: 704 LYKKSKTKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTADYADLDKLAKR 763 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 + + F ++ +Q +G+ P+ Sbjct: 764 FLKGEQEGLVNRPTKAFVEEVV----------------KDLQTGQKGECPICLESMEDAV 807 Query: 121 HGLNLQYGGNIL---VFFSLWWDLEEHQQMIERIGVTRQ 156 L + L F+ W I R +TRQ Sbjct: 808 ----LTPCAHRLCRDCLFASWRSYGGGPCPICRQTLTRQ 842 >gi|14140291|gb|AAK54297.1|AC034258_15 putative helicase [Oryza sativa Japonica Group] Length = 1492 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 49/125 (39%), Gaps = 16/125 (12%) Query: 91 GRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++ +N+ ++ + G+NL N ++ W+ Sbjct: 1193 STPSSERQNLVERFNDPENIRVKCTLISTRAGSLGINLHS-ANRVILLDGSWNPTH---- 1247 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-------KK 200 + + R + G + V+ Y L+A T++E + +R TK + +++ K+ Sbjct: 1248 -DLQAIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVSRTISKE 1306 Query: 201 ETIHV 205 E +H+ Sbjct: 1307 EMLHL 1311 >gi|307202701|gb|EFN82007.1| Lymphoid-specific helicase [Harpegnathos saltator] Length = 587 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 62/186 (33%), Gaps = 28/186 (15%) Query: 33 LQLANGAVYYDEEKHWKEVH---------DEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++ N + K+ L+ ++ K A +++ L Sbjct: 345 KKIVNHPYLIQCPLDSIGLPKVDDDLIKSSGKLLVLDAMLAKLKAQGHKVLLFSTMTMIL 404 Query: 82 ARLQKA-----------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 ++ + N I L + G GLNL + Sbjct: 405 DIIEDYLSLRDYKYLRLDGNDNIELRKRNIDNFNNNKDIFLFLISIRAGGIGLNL-AAAD 463 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + W+ + ++ + R + G + V +Y L + TIDE ++ R +K + Sbjct: 464 TVIIYDSDWNPQ-----VDIQAMARCHRIGQTKPVVIYKLCTKGTIDEAIINRSESKRIL 518 Query: 191 QDLLLN 196 + ++++ Sbjct: 519 EKMVIS 524 >gi|225682156|gb|EEH20440.1| RING-11 protein [Paracoccidioides brasiliensis Pb03] Length = 841 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I+ + N + Sbjct: 679 KLRSKKQTHKSIVFSQFTSMLQLVEWRLRRVGFNTVMLDGSMTPAQRQKSIEHFMNNVDV 738 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 739 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 792 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + +N + E + Sbjct: 793 LCIEDSVESRMVLLQEKKANMIRGTINKDQSEALE 827 >gi|70954393|ref|XP_746245.1| DNA helicase [Plasmodium chabaudi chabaudi] gi|56526791|emb|CAH81164.1| DNA helicase, putative [Plasmodium chabaudi chabaudi] Length = 1024 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 77/236 (32%), Gaps = 47/236 (19%) Query: 3 QYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY---DEEKHWKEVHDEKIKA 58 Y + + + + + + + + ++ ++ N + + K + Sbjct: 637 LYKQIEEKTFKQVNSDGTVNTKSFQNTIMQLRKIVNHPFLFTNNYDINDCIIKSSGKFEV 696 Query: 59 LEVIIEK--ANAAPIIVAYHFNS---------DLARLQKAFPQGRTL-DKDPCTIQEWNE 106 L+ +I K I++ +L R + G I +NE Sbjct: 697 LDRMIPKLIKFKHKILLFCQMTRVMDILCDYFELRRYKYHRLDGSVSLSDRRQIIDNFNE 756 Query: 107 GKI-------------------------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K + S G GLNLQ + ++ F ++ Sbjct: 757 PKSVNNCKEIDQNDINDLSNQELDTDEAMIFILSTRSGGLGLNLQA-ADTVIIFDSDFNP 815 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G K V V+ I ++++ELV QR + K I D ++ A Sbjct: 816 HQ-----DIQAMCRCHRIGQKNVVKVFRFITLSSVEELVFQRAKDKLNINDKVIQA 866 >gi|261205042|ref|XP_002627258.1| SNF2 family protein [Ajellomyces dermatitidis SLH14081] gi|239592317|gb|EEQ74898.1| SNF2 family protein [Ajellomyces dermatitidis SLH14081] Length = 945 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + +H K+ L ++ K N +V F L + Sbjct: 732 KNDEWMHSGKVDKLCELLTRFKENGDRTLVFSQFTMVMDILEHVLQTLQMRFFRLDGSTS 791 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ T+ ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 792 VEDRQSTLDAFHEQVDIPVFLLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDVQA 845 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G RAV V L+ ++TI+E + +TK + + Sbjct: 846 ENRAHRVGQTRAVEVVRLVTRDTIEEQMYALGQTKLALDQRV 887 >gi|330922513|ref|XP_003299868.1| hypothetical protein PTT_10956 [Pyrenophora teres f. teres 0-1] gi|311326280|gb|EFQ92036.1| hypothetical protein PTT_10956 [Pyrenophora teres f. teres 0-1] Length = 916 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 67/222 (30%), Gaps = 41/222 (18%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------------EEKHWKE 50 R ++ + + ++ N + E Sbjct: 605 RAATFEIAKRQLMQKKLGNPIMQLRLCCNSPYNFFNPFIKADTDGTETFASETEPDETIV 664 Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDP 98 K+ L+ ++ + +++ F + L L Sbjct: 665 STSGKMLLLDSLLPELIRRGHKVLIFSQFTTTLDLLGHYLDLRSWNYARIDGSVAQTDRQ 724 Query: 99 CTIQEWNEGKI-----PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N+ + + G G+NL + ++ F W+ ++ + + Sbjct: 725 EQILAFNKPSTTKEAADIFILSTRAGGQGINL-AAADTVILFDSDWNPQQ-----DLQAM 778 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V VY +NT+++ +L+ K ++ L++ Sbjct: 779 DRAHRIGQTRNVIVYRFATRNTVEQKLLESAEAKRRLEKLVI 820 >gi|294782979|ref|ZP_06748305.1| Snf2 family protein [Fusobacterium sp. 1_1_41FAA] gi|294481620|gb|EFG29395.1| Snf2 family protein [Fusobacterium sp. 1_1_41FAA] Length = 896 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 77/193 (39%), Gaps = 20/193 (10%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAY 75 + F + + + E + K + +K +E +IE N +++ Sbjct: 697 QGTFDKFFVLQAINELRHIVSSP----ELDNNKIISSKKEVLIENVIEAIENDHKVLIFV 752 Query: 76 HFNSDL---------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 ++ S + +++ G+T D+ + ++ + + + G GLNL Sbjct: 753 NYLSSIESICNSLKENKIKFLKMTGQTKDRQSLVDKFQSDNRYKVFVMTLKTGGVGLNLV 812 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + + WW+ + +E + R + G + VF Y +I +NTI+E +L+ Sbjct: 813 S-ADTIFIYDPWWN-----KTVENQAIDRAYRLGQDKTVFAYKMIMRNTIEEKILKLQEI 866 Query: 187 KSTIQDLLLNALK 199 K + D L++ Sbjct: 867 KDKLLDDLISEDN 879 >gi|298715262|emb|CBJ27911.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1021 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 19/162 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWN 105 +++L + N +V F S L +Q T + ++ + Sbjct: 845 LQSLHELRRSGNGDKAVVFSQFTSFLDVIQPFLLADGFRLARLDGSMTNKQRQAELKRFA 904 Query: 106 E---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ A + G G+NL N WW+ +E + R + G Sbjct: 905 GKGGDGAEVMLASLMAAGTGINLTS-ANHCFIADPWWNAS-----VESQAMDRVHRIGQT 958 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + V V +++ +++++ +L+ K + L LK + + Sbjct: 959 KPVRVVRMVSADSVEDRILEIQEAKEALGKGALRKLKPDEVR 1000 >gi|237739928|ref|ZP_04570409.1| SWF/SNF family helicase [Fusobacterium sp. 2_1_31] gi|229421945|gb|EEO36992.1| SWF/SNF family helicase [Fusobacterium sp. 2_1_31] Length = 896 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 75/185 (40%), Gaps = 20/185 (10%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDL-- 81 + + + E + K + +K +E +IE N +++ ++ S + Sbjct: 705 VLQAINELRHIVSSP----ELDNNKIISSKKEVLIENVIEAIENDHKVLIFVNYLSSIES 760 Query: 82 -------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 +++ G+T D+ + ++ + + + G GLNL + + Sbjct: 761 ICNSLKENKIKFLKMTGQTKDRQSLVDKFQSDNRYKVFVMTLKTGGVGLNLVS-ADTIFI 819 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + WW+ + +E + R + G + VF Y +I +NTI+E +L+ K + D L Sbjct: 820 YDPWWN-----KTVENQAIDRAYRLGQDKTVFAYKMIMRNTIEEKILKLQEIKDKLLDDL 874 Query: 195 LNALK 199 ++ Sbjct: 875 ISEDN 879 >gi|322696102|gb|EFY87899.1| DNA repair protein RAD16 [Metarhizium acridum CQMa 102] Length = 1097 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 51/156 (32%), Gaps = 17/156 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW- 104 + L + + I+ F + L ++ T + +I+ + Sbjct: 931 VHELHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPSQRQASIEHFM 990 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + + G LNL + + WW+ Q +R + G R Sbjct: 991 NNVDVECFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQTRP 1044 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + L +++++ ++ K+ + +NA K Sbjct: 1045 CTITRLCIEDSVESRMVLIQEKKTNMIHSTVNADDK 1080 >gi|123445199|ref|XP_001311362.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gi|121893168|gb|EAX98432.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] Length = 1639 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 23/202 (11%), Positives = 59/202 (29%), Gaps = 41/202 (20%) Query: 30 VKCLQLANGAVYYDEEKHWKEVH----------------------DEKIKALEVIIE--K 65 ++ ++ N + + K+ ++ ++ K Sbjct: 520 MELRKVCNHPYLITGAEDAILIEKMQQLGLKERTNEFELETLIRTSGKLILVDKLLANLK 579 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFA 114 +++ L LQ + +I ++ E I + Sbjct: 580 KEGHRVLIFSQMTKMLDLLQDMLTYRNYKYRRIDGTVRGKDRQASIDDFQEQEDIFVFLL 639 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + + + W+ + + R + G + V +Y LI +N Sbjct: 640 CTRAGGVGINLTS-ADRCIIYDSDWNPQN-----DIQATARCHRIGQTKEVKMYRLITKN 693 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 + + + K + +L Sbjct: 694 SYERSMFDTASKKLGLDKAILE 715 >gi|15240074|ref|NP_201476.1| CHR1 (CHROMATIN REMODELING 1); ATPase/ helicase [Arabidopsis thaliana] gi|75338558|sp|Q9XFH4|DDM1_ARATH RecName: Full=ATP-dependent DNA helicase DDM1; AltName: Full=Protein CHROMATIN REMODELING 1; Short=CHR01; AltName: Full=Protein DECREASED DNA METHYLATION 1; Short=AtDDM1; AltName: Full=Protein SOMNIFEROUS 1; AltName: Full=SWI/SNF2-related matrix-associated actin-dependent regulator of chromatin DDM1 gi|4726079|gb|AAD28303.1|AF143940_1 SWI2/SNF2-like protein [Arabidopsis thaliana] gi|8843733|dbj|BAA97281.1| SWI2/SNF2-like protein [Arabidopsis thaliana] gi|20466344|gb|AAM20489.1| SWI2/SNF2-like protein [Arabidopsis thaliana] gi|25084090|gb|AAN72172.1| SWI2/SNF2-like protein [Arabidopsis thaliana] gi|332010876|gb|AED98259.1| chromatin remodeling 1 [Arabidopsis thaliana] Length = 764 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 25/196 (12%), Positives = 66/196 (33%), Gaps = 37/196 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA---------------NAAPII 72 ++ + N + + +E I+ + N ++ Sbjct: 489 LVIQLRKNCNHP----DLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVL 544 Query: 73 VAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCG 120 + + L + F LD+ I+++++ + + G Sbjct: 545 IFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGG 604 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + + + W+ + ++ + R + G + V VY L +I+ V Sbjct: 605 LGINLTA-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRV 658 Query: 181 LQRLRTKSTIQDLLLN 196 L+R +K ++ +++ Sbjct: 659 LKRAYSKLKLEHVVIG 674 >gi|58258561|ref|XP_566693.1| DNA repair protein RAD5 [Cryptococcus neoformans var. neoformans JEC21] gi|74687780|sp|Q5KPG8|RAD5_CRYNE RecName: Full=DNA repair protein RAD5 gi|57222830|gb|AAW40874.1| DNA repair protein RAD5, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1198 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 18/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW- 104 ++ LE I ++ A +V F S L ++ F + + TI+E+ Sbjct: 1023 LRQLEEIRQEDPKAKALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFG 1082 Query: 105 -NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +L + G GLNL N + WW+ QQ I+R+ + G + Sbjct: 1083 RKTNEPLILLISLKAGGVGLNLT-MANYVFLMDTWWNEAIEQQAIDRV-----HRLGQNK 1136 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+V I + T+++ +++ R+K+ + + L+ Sbjct: 1137 PVYVTRYIIKGTVEKRIMKIQRSKTALVNASLS 1169 >gi|225468254|ref|XP_002267456.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] Length = 848 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 26/202 (12%), Positives = 64/202 (31%), Gaps = 22/202 (10%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANG-AVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 E + A K G + + + + E ++++ + Sbjct: 638 ESRLYDSSKIRAALEVLQSLSKPRDCTLGNSSLKSSNETTSGLENLSDSHSEGLLKETS- 696 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHPA 117 IV + L L+ + ++++N ++ ++ Sbjct: 697 ---IVFSQWTRMLDLLESCLKNSSIQYRRLDGTMSVVARDKAVKDFNTLPEVSVMIMSLK 753 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLN+ + ++ LWW+ E + R + G R V V L ++T++ Sbjct: 754 AASLGLNMVAACH-VLLLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVLRLTVKDTVE 807 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 + +L + K + + Sbjct: 808 DRILALQQKKREMVASAFGEDE 829 >gi|15231009|ref|NP_188635.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] gi|11994776|dbj|BAB03166.1| transcription factor-like protein [Arabidopsis thaliana] Length = 1047 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 46/139 (33%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPAS 118 I+ + L ++ + + + + + ++ + Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKA 953 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E + R + G R V V + ++T+++ Sbjct: 954 GNLGLNMVAACH-VILLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVTRITIKDTVED 1007 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L+ K T+ Sbjct: 1008 RILKLQEEKRTMVASAFGE 1026 >gi|327355372|gb|EGE84229.1| DNA excision repair protein [Ajellomyces dermatitidis ATCC 18188] Length = 1026 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 17/171 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 QL + + K+ + N ++V H L LQ F Sbjct: 595 RQLYATRDSILNYANHEFCGKWKVLKKLLRWWHGNGDKVLVFSHSVRLLKMLQMLFKHTS 654 Query: 91 --------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + D + +N + + + + G GLN+ N +V W+ Sbjct: 655 YNVSYLDGAMSYDDRTKAVDSFNADPREFVFLISTRAGGVGLNITS-ANKVVVVDPNWNP 713 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R V V+ L++ TI+E+V R K + Sbjct: 714 A-----YDLQAQDRAYRIGQSRDVEVFRLVSAGTIEEIVYARQIYKQQQAN 759 >gi|68485787|ref|XP_713174.1| hypothetical protein CaO19.9427 [Candida albicans SC5314] gi|46434654|gb|EAK94057.1| hypothetical protein CaO19.9427 [Candida albicans SC5314] Length = 1641 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 68/170 (40%), Gaps = 19/170 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQG 91 +K + K++ L ++++ + ++ L + G Sbjct: 1355 FPDKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDG 1414 Query: 92 RTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +D + + + KIP+ S G G+NL G + ++F+ W+ ++ Sbjct: 1415 ATKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPA-----MD 1468 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G R V +Y +++ TI+ ++++ K + ++++ + Sbjct: 1469 KQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQEGE 1518 >gi|302812321|ref|XP_002987848.1| hypothetical protein SELMODRAFT_426581 [Selaginella moellendorffii] gi|300144467|gb|EFJ11151.1| hypothetical protein SELMODRAFT_426581 [Selaginella moellendorffii] Length = 437 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 22/183 (12%), Positives = 55/183 (30%), Gaps = 17/183 (9%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-----------AA 69 F S ++ Q+ + E ++ + E Sbjct: 237 NRFKILSMLLRLRQMYDHPALLKSEDLFQGDDLGEDNDDEDQQHMRQALNLKKLQLEAQE 296 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 ++ + K ++ + + ++ +L + G GLNL Sbjct: 297 KQHDFERGVQEIGQSAKIDGSMNMTKREAEISRFNRDPEVMVLLLSLRAAGCGLNLVA-A 355 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ +WW+ E + R + R V V + + +++E +L K Sbjct: 356 SCVLLIDMWWNPTT-----EDQAIDRAHRIVQTRPVHVTKFMVKESVEEQILAIQEKKKK 410 Query: 190 IQD 192 + + Sbjct: 411 MVE 413 >gi|297812401|ref|XP_002874084.1| hypothetical protein ARALYDRAFT_489124 [Arabidopsis lyrata subsp. lyrata] gi|297319921|gb|EFH50343.1| hypothetical protein ARALYDRAFT_489124 [Arabidopsis lyrata subsp. lyrata] Length = 1029 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 59/158 (37%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDP 98 V KI AL +E +++ + I+ + + L LQ + + Sbjct: 860 VESSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLNQQQRE 919 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++E+ +G I +L + G G+NL + WW+ +E V R Sbjct: 920 KVLKEFSEDGSILVLLMSLKAGGVGINLTA-ASNAFVMDPWWNPA-----VEEQAVMRIH 973 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G ++V + I + T++E + K + L Sbjct: 974 RIGQTKSVKIRRFIVKGTVEERMEAVQARKQRMISGAL 1011 Score = 36.3 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 19/193 (9%), Positives = 47/193 (24%), Gaps = 26/193 (13%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + + ++ Q + E D Sbjct: 695 YDALFKRSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTTEYSDLNKL 754 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + + K++ L R K P + + +++ +G+ P+ Sbjct: 755 SKRFLSGKSSG------------LEREGKDVPSEAFVQEVVEELRKGEQGECPICL---- 798 Query: 118 SCGHGLNLQYGGNIL---VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 L + L + W + + R V++Q + +N Sbjct: 799 EAFEDAVLTPCAHRLCRECLLASWRNSNTGLCPVCRKTVSKQELITAPTESRFQVDVEKN 858 Query: 175 TID-ELVLQRLRT 186 ++ + L Sbjct: 859 WVESSKITALLEE 871 >gi|70946126|ref|XP_742810.1| ATP-dependant helicase [Plasmodium chabaudi chabaudi] gi|56521995|emb|CAH89085.1| ATP-dependant helicase, putative [Plasmodium chabaudi chabaudi] Length = 631 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 64/167 (38%), Gaps = 19/167 (11%) Query: 43 DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 + K+ ALE ++ K ++ F L L+ Sbjct: 250 FPLNKDISLGSGKLFALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDG 309 Query: 91 GRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +++ + ++N K + + S G+NL N+++F+ W+ I+ Sbjct: 310 STKVEQRQKIVTKFNNDKSYFIFISSTRSGSIGINLTA-ANVVIFYDTDWNPS-----ID 363 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G + V V+ + + T++E + ++ K + ++ +N Sbjct: 364 KQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICIN 410 >gi|320031638|gb|EFW13598.1| chromatin remodeling complex subunit Chd3 [Coccidioides posadasii str. Silveira] Length = 1534 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 74/232 (31%), Gaps = 41/232 (17%) Query: 2 KQYH-------KFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV 51 K Y + + ++ G + E N + V+ + Y + + V Sbjct: 936 KLYKSILAKNPQLIKAIFKKTDGRSLKQSERHNLNNILVQLRKCLCHPFVYSKAIEERGV 995 Query: 52 HDEKIKALE-------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 D + + + +++ F L ++ Sbjct: 996 SDTLLYRNLVEASSKLQLLELLLPKLQERGHRVLLFSQFLDFLDIIEDFLDGLGVLHLRL 1055 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + I E+N P + + G G+NL + ++ ++ + Sbjct: 1056 DGSLSSLQKQKRIDEFNAPNSPYFVFMLSTRAGGVGINL-ATADTVIIMDPDFNPHQ--- 1111 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + ++R + G R V V+ L+ + T +E ++Q R K + L+ + Sbjct: 1112 --DIQALSRAHRIGQHRKVLVFQLMTKGTAEEKIIQIGRKKMALDQALIGFM 1161 >gi|121711213|ref|XP_001273222.1| DNA excision repair protein Rad16, putative [Aspergillus clavatus NRRL 1] gi|119401373|gb|EAW11796.1| DNA excision repair protein Rad16, putative [Aspergillus clavatus NRRL 1] Length = 842 Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 49/155 (31%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKI 109 + K IV F S L ++ + + N + Sbjct: 680 KLRSKKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQRQRSIDHFMNNVDV 739 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 740 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 793 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + LN + E + Sbjct: 794 LCIEDSVESRIVLLQEKKANLINGTLNKDQGEALE 828 >gi|303312901|ref|XP_003066462.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240106124|gb|EER24317.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1492 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 74/232 (31%), Gaps = 41/232 (17%) Query: 2 KQYH-------KFQRELYCDLQG---ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV 51 K Y + + ++ G + E N + V+ + Y + + V Sbjct: 894 KLYKSILAKNPQLIKAIFKKTDGRSLKQSERHNLNNILVQLRKCLCHPFVYSKAIEERGV 953 Query: 52 HDEKIKALE-------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 D + + + +++ F L ++ Sbjct: 954 SDTLLYRNLVEASSKLQLLELLLPKLQERGHRVLLFSQFLDFLDIIEDFLDGLGVLHLRL 1013 Query: 91 --GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + I E+N P + + G G+NL + ++ ++ + Sbjct: 1014 DGSLSSLQKQKRIDEFNAPNSPYFVFMLSTRAGGVGINL-ATADTVIIMDPDFNPHQ--- 1069 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + ++R + G R V V+ L+ + T +E ++Q R K + L+ + Sbjct: 1070 --DIQALSRAHRIGQHRKVLVFQLMTKGTAEEKIIQIGRKKMALDQALIGFM 1119 >gi|323508282|emb|CBQ68153.1| related to helicase-dna-binding protein [Sporisorium reilianum] Length = 2273 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 75/241 (31%), Gaps = 47/241 (19%) Query: 2 KQYHKFQRELYCDL------------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK 49 + Y D+ +G+ N + ++ + + + Sbjct: 1247 RIYRSILESNIEDIQALAASREKGAKKGQKSTITNLNNTLMQLRKCIQHPYLIAPDLETR 1306 Query: 50 EVH---------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR 92 E K+ L+ ++ K A +++ F +L ++ Sbjct: 1307 EGEANYEATWEHQRLIDASAKLSLLQRLLPKLKAEGHRVLLFSQFVINLDIVEVFLRGEG 1366 Query: 93 T----------LDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWD 140 + I +N P + G G+NL + ++ ++ Sbjct: 1367 YKFLRLDGAIGQKQRQKGIDAFNAPDSPYFIYMISTRAGGVGINL-ATADTVIIMDPDFN 1425 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++ + R + G + + V+ L+ + T +E +++ + K + L++ L K Sbjct: 1426 P-----HVDMQAIARAHRIGQTKKLLVFTLMCKATAEERMIESAKRKMMLDHLIVQNLDK 1480 Query: 201 E 201 E Sbjct: 1481 E 1481 >gi|296448804|ref|ZP_06890651.1| helicase domain protein [Methylosinus trichosporium OB3b] gi|296253690|gb|EFH00870.1| helicase domain protein [Methylosinus trichosporium OB3b] Length = 949 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 64/182 (35%), Gaps = 16/182 (8%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 + + C+++ + E+++ + + +IV + L ++ Sbjct: 513 LQQLLACMRMVCDTPAILDPTCRISPKLEELEKILADLLDEPERKVIVFSEWERMLTMVR 572 Query: 86 K----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + ++ I + LF S GLNLQ + +V Sbjct: 573 ELAGEMGVEAAWHTGSLPQERRRAEINRFKRDPACRLFFSTDSGSVGLNLQ-VASAVVNV 631 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 L W+ + +Q I R + R+V V L+ + +I+ +L + K + D +L Sbjct: 632 DLPWNPAKLEQRIAR-----AWRKNQPRSVSVVNLVTEGSIEHSILHLIGQKQALADGVL 686 Query: 196 NA 197 + Sbjct: 687 DG 688 >gi|134106523|ref|XP_778272.1| hypothetical protein CNBA2720 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260975|gb|EAL23625.1| hypothetical protein CNBA2720 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1198 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 18/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW- 104 ++ LE I ++ A +V F S L ++ F + + TI+E+ Sbjct: 1023 LRQLEEIRQEDPKAKALVFSQFTSFLDLIEATLTKQGIRWLRFDGTMSQAQRANTIEEFG 1082 Query: 105 -NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +L + G GLNL N + WW+ QQ I+R+ + G + Sbjct: 1083 RKTNEPLILLISLKAGGVGLNLT-MANYVFLMDTWWNEAIEQQAIDRV-----HRLGQNK 1136 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+V I + T+++ +++ R+K+ + + L+ Sbjct: 1137 PVYVTRYIIKGTVEKRIMKIQRSKTALVNASLS 1169 >gi|332019436|gb|EGI59920.1| Lymphoid-specific helicase [Acromyrmex echinatior] Length = 690 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 64/186 (34%), Gaps = 28/186 (15%) Query: 33 LQLANGAVYYDEEKHWKEVH---------DEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++ N + + K+ L+ ++ K +++ L Sbjct: 457 KKIVNHPYLVHCPLNSTGLPKIDTDLIRSSGKLLVLDAMLAKLKMRGHKVLLFSTMTMIL 516 Query: 82 ARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 ++ + N+ + L + G GLNL G + Sbjct: 517 DMIEDYLTLRDYNYVRLDGATKIEARKQNIAAFNNDPDLFLFLISIRAGGVGLNL-MGAD 575 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + W+ + ++ + R + G + V VY L + TIDE +++R K + Sbjct: 576 TVIIYDSDWNPQ-----VDIQAMARCHRIGQTKPVVVYKLCTKGTIDEAIMKRADAKRIL 630 Query: 191 QDLLLN 196 + ++++ Sbjct: 631 EKIVIS 636 >gi|291244998|ref|XP_002742381.1| PREDICTED: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1-like [Saccoglossus kowalevskii] Length = 1082 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 63/178 (35%), Gaps = 21/178 (11%) Query: 32 CLQLANGAVYYDEEKHWKE--VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA 87 L N E ++ K L+ ++ + +++ F L ++ Sbjct: 888 LHGLCNQYYSISSFTLPTETLLNSGKFYKLDSLLPEMKQRGDRVLLFSQFTMMLDIIEVY 947 Query: 88 FPQGR----------TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + + I ++N I + + G G+NL N+++ Sbjct: 948 MQYHKHKYLRLDGQTPVQERLQLIDKYNNDNGIFVFLLSTKAGGLGINLTS-ANVVIIHD 1006 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + ++ ++ R + G R V V LI +NTI+E +L+ K ++ + Sbjct: 1007 IDFNP-----YNDKQAEDRCHRVGQTRDVTVIRLICENTIEEAMLKCAMGKLKLEADI 1059 >gi|67594179|ref|XP_665781.1| RAD26-like dna repair and recombination protein [Cryptosporidium hominis TU502] gi|54656607|gb|EAL35548.1| RAD26-like dna repair and recombination protein [Cryptosporidium hominis] Length = 822 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + I L G GLN+ G N ++ + WW+ + R + Sbjct: 424 VKRFNQNQSIFLFILTSRVGGVGLNIT-GANRVILYDPWWNPMT-----DVQAKERCWRI 477 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V VY LI ++TI+E + QR K I +L K + Sbjct: 478 GQKKEVIVYRLITRDTIEEKIFQRQLFKEFIAKQILKDPKSQ 519 >gi|326475388|gb|EGD99397.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] Length = 1143 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + ++ K+ L +++ N I+V F + Sbjct: 949 KNKEWMNSGKVDKLCELLDNYIANGDRILVFSQFTMVMDILEQVLETQKIKFFRLDGKTS 1008 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 1009 VEDRQSILDAFHEQVDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDIQA 1062 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1063 ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 1104 >gi|296413962|ref|XP_002836675.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630508|emb|CAZ80866.1| unnamed protein product [Tuber melanosporum] Length = 870 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 59/161 (36%), Gaps = 22/161 (13%) Query: 52 HDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 H K + LE ++ I++ ++ S L LQ +K Sbjct: 552 HSGKFRVLERLLLALRNTTDEKIVLVSNYTSTLDLLQNLLRSRGLSYLRLDGTTPTNKRQ 611 Query: 99 CTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N S G GLNL G + L F L W+ + + R Sbjct: 612 ELVDQFNRTNSTTAFAFLLSAKSGGAGLNL-IGASRLALFDLDWNPAT-----DAQAMAR 665 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G +R V +Y ++ DE + QR TK + D +++ Sbjct: 666 IHRDGQRREVKIYRMLTTGCFDEKIYQRQLTKIGLADSVMD 706 >gi|296083594|emb|CBI23583.3| unnamed protein product [Vitis vinifera] Length = 1287 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 17/164 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQ 102 E + LE I + IV + S L L+ + + ++ Sbjct: 1028 SELLHCLERISQSRIGEKSIVFSQWTSFLDLLEIPLRRRGIGFLRYDGKVVQKQRERILK 1087 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E++E + +L + G GLNL + + WW+ +Q I RI + G Sbjct: 1088 EFSETEEKTVLLMSLKAGGVGLNLTA-ASNVFLMDPWWNPAVEEQAIMRI-----HRIGQ 1141 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +R V V I ++T++E + Q K + L + T + Sbjct: 1142 ERTVRVRRFIVKDTVEERMQQVQARKQRMITGALTDEEVRTARI 1185 Score = 36.3 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 3/53 (5%), Positives = 9/53 (16%), Gaps = 6/53 (11%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 Y + + ++ Q N ++ Sbjct: 858 YDALFKRSKVRFDQFVEQGRVLHNYASILELLLRLRQCCNHPFLVMSRGDTQQ 910 >gi|156838524|ref|XP_001642966.1| hypothetical protein Kpol_1071p14 [Vanderwaltozyma polyspora DSM 70294] gi|156113549|gb|EDO15108.1| hypothetical protein Kpol_1071p14 [Vanderwaltozyma polyspora DSM 70294] Length = 353 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 72/204 (35%), Gaps = 35/204 (17%) Query: 21 EAFNSASKTVKCLQLANGAVYY--------------DEEKHWKEVHDEKIKALEVIIEK- 65 +S ++ N + K+ +EV K+K L +++ Sbjct: 8 TFNSSLGLITLFKKICNSPTLISSDSYFQSKIKQSGTDSKYNREVDSGKLKVLSELLKSI 67 Query: 66 ---ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPL 111 +N +++ ++ L ++K + + +N + Sbjct: 68 TQISNKEKVVIVSNYTQTLDIIEKMLHSLSLSFTRLDGSTPNRQRDSIVSLFNRSPHVFA 127 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 S G GLNL G + L+ F W+ I+ ++R + G KR F+Y L+ Sbjct: 128 FLLSAKSGGVGLNL-IGASRLILFDNDWNPA-----IDLQAMSRIHRDGQKRPCFIYRLV 181 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 IDE +LQR K ++ L Sbjct: 182 TTGCIDEKILQRQLMKHSLSKKFL 205 >gi|238883647|gb|EEQ47285.1| helicase SWR1 [Candida albicans WO-1] Length = 1641 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 68/170 (40%), Gaps = 19/170 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQG 91 +K + K++ L ++++ + ++ L + G Sbjct: 1355 FPDKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDG 1414 Query: 92 RTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +D + + + KIP+ S G G+NL G + ++F+ W+ ++ Sbjct: 1415 ATKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPA-----MD 1468 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G R V +Y +++ TI+ ++++ K + ++++ + Sbjct: 1469 KQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQEGE 1518 >gi|217076139|ref|YP_002333855.1| helicase [Thermosipho africanus TCF52B] gi|217035992|gb|ACJ74514.1| helicase [Thermosipho africanus TCF52B] Length = 835 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 75/190 (39%), Gaps = 27/190 (14%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF------ 77 +K LQ+ + D H K+ L+ ++ + ++ F Sbjct: 637 LGLAIKLLQVCD--FGADYFDENFYKHSGKLNKLKDLMIEIKNKKEKALIFTKFIMTQQI 694 Query: 78 -----NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 ++L + ++ ++++N+GKI +L +P G GLNL N + Sbjct: 695 IKAFLRNELGIESEILNGTVPIETRNYIVKQFNDGKIDVLIINPRVGGVGLNLVA-ANHV 753 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ------NTIDELVLQRLRT 186 + ++ W+ R + G + V+VYY ++ TI+E ++ L Sbjct: 754 IHYTPEWNPAVTS-----QATDRAYRIGQDKDVYVYYFFSKFRNNHNKTIEEYFMKLLER 808 Query: 187 KSTIQDLLLN 196 K I+++LL+ Sbjct: 809 KKQIKNILLD 818 >gi|224145833|ref|XP_002325780.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222862655|gb|EEF00162.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 495 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 51/131 (38%), Gaps = 16/131 (12%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + ++ +N+ ++ + G+NL Y N ++ W+ Sbjct: 166 KDWLDGRTESSERQRLVERFNDPENKRVKCTLISTRAGSLGINL-YAANRVIIVDGSWNP 224 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL--- 198 + + R + G + VF Y L+A T++E + +R TK + +++ Sbjct: 225 T-----YDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVY 279 Query: 199 ----KKETIHV 205 ++E +H+ Sbjct: 280 RTMSREEMLHL 290 >gi|62751341|ref|NP_001015697.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Xenopus (Silurana) tropicalis] gi|58618908|gb|AAH89242.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Xenopus (Silurana) tropicalis] Length = 1003 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 65/178 (36%), Gaps = 21/178 (11%) Query: 32 CLQLANGAVYYDEEKHWKEV--HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA 87 +L N + K KE+ K LE ++ K +++ F L ++ Sbjct: 807 LHRLCNEFTTLSQYKLEKELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVF 866 Query: 88 FPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + I E+N + I + + G G+NL NI++ Sbjct: 867 LRHHQHRYVRLDGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTS-ANIVILHD 925 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + ++ R + G + V V LI + TI+E +L+ + K ++ + Sbjct: 926 IDCNP-----YNDKQAEDRCHRVGQTKEVKVIKLIGKGTIEESMLKISQQKLRLEQDM 978 >gi|149240093|ref|XP_001525922.1| helicase SWR1 [Lodderomyces elongisporus NRRL YB-4239] gi|146450045|gb|EDK44301.1| helicase SWR1 [Lodderomyces elongisporus NRRL YB-4239] Length = 1764 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 54/125 (43%), Gaps = 7/125 (5%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + ++ +++N + KIP+ S G G+NL G + ++F Sbjct: 1528 QFLNIHGYRYMRLDGATKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIF 1586 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ +++ R + G R V +Y +++ TI+ ++++ K + +++ Sbjct: 1587 YDSDWNPA-----MDKQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVV 1641 Query: 195 LNALK 199 + + Sbjct: 1642 IQEGE 1646 >gi|146417440|ref|XP_001484689.1| hypothetical protein PGUG_02418 [Meyerozyma guilliermondii ATCC 6260] Length = 847 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 55/160 (34%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDK 96 KI+AL + K + IV F S L ++ + + Sbjct: 674 SSTKIEALVEELYKLRSDRHTIKSIVFSQFTSMLDLIEWRLKRAGFETVKLQGSMSPQQR 733 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D + + + G LNL + + WW+ Q ++R+ Sbjct: 734 DNTIRHFMENTGVEVFLVSLKAGGVALNL-CEASQVFLMDPWWNPSVEWQSMDRV----- 787 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G KR + + +++I+ +++ K+ + + +N Sbjct: 788 HRIGQKRPIRITRFCIEDSIELKIIELQEKKANMINATIN 827 >gi|68485880|ref|XP_713128.1| hypothetical protein CaO19.1871 [Candida albicans SC5314] gi|74679737|sp|Q59U81|SWR1_CANAL RecName: Full=Helicase SWR1 gi|46434607|gb|EAK94011.1| hypothetical protein CaO19.1871 [Candida albicans SC5314] Length = 1641 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 68/170 (40%), Gaps = 19/170 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQG 91 +K + K++ L ++++ + ++ L + G Sbjct: 1355 FPDKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDG 1414 Query: 92 RTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T +D + + + KIP+ S G G+NL G + ++F+ W+ ++ Sbjct: 1415 ATKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIFYDSDWNPA-----MD 1468 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G R V +Y +++ TI+ ++++ K + ++++ + Sbjct: 1469 KQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQEGE 1518 >gi|241951878|ref|XP_002418661.1| helicase, putative [Candida dubliniensis CD36] gi|223642000|emb|CAX43964.1| helicase, putative [Candida dubliniensis CD36] Length = 1636 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 54/125 (43%), Gaps = 7/125 (5%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + ++ +++N + KIP+ S G G+NL G + ++F Sbjct: 1395 QFLNIHGYRYMRLDGATKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIF 1453 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ +++ R + G R V +Y +++ TI+ ++++ K + +++ Sbjct: 1454 YDSDWNPA-----MDKQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVV 1508 Query: 195 LNALK 199 + + Sbjct: 1509 IQEGE 1513 >gi|193848542|gb|ACF22729.1| putative SWI/SNF related protein [Brachypodium distachyon] Length = 578 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 68/200 (34%), Gaps = 30/200 (15%) Query: 30 VKCLQLANGAVYYD--EEKHWKEVHDEKIKALEVIIEKANAA--------PIIVAYHFNS 79 ++ + N + E D I++ ++ +++ Sbjct: 1 MQLRKCCNHPYLFKGAEPGPPYTTGDHLIESAGKMVLLDKLLPKLKARSSRVLIFSQMTR 60 Query: 80 DLARLQKAFPQGRTLDKD----------PCTIQEWNEGKI--PLLFAHPASCGHGLNLQY 127 L L+ I+ +N+ + + + G G+NL Sbjct: 61 LLDILEDYLMYKGYQYCRIDGSTGGDDCDAFIEAFNKPESEKFIFLLSTRAGGLGINLTT 120 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 +I++ + W+ + ++ R + G K+ V V+ ++TI+E V++R K Sbjct: 121 -ADIVIIYDSDWNPQ-----VDLQAQDRAHRIGQKKEVQVFRFCTEDTIEEKVIERAYKK 174 Query: 188 STIQDLLLNAL--KKETIHV 205 + L++ K E + + Sbjct: 175 LVLDALVIQQAINKDELLQM 194 >gi|218680317|ref|ZP_03528214.1| non-specific serine/threonine protein kinase [Rhizobium etli CIAT 894] Length = 297 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 18/146 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEW-NEGKIPL 111 + A +V + + + G +K P ++ + N+ + Sbjct: 8 LFADPEAKAVVFSQWTRTHEIVIRRLKARGIGYVSLHGGVPSEKRPELVERFRNDPDCRV 67 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + GLNLQ + LV L W+ +Q I RI + G R V V + Sbjct: 68 FL-STEAGSAGLNLQN-ASTLVNMDLPWNPAILEQRIARI-----HRIGQARPVQVINFV 120 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ TI+E +L L K ++ +L+ Sbjct: 121 SKGTIEEGMLSVLAFKRSLSAGILDG 146 >gi|149408367|ref|YP_001294470.1| hypothetical protein ORF053 [Pseudomonas phage F8] gi|219523924|ref|YP_002455985.1| helicase [Pseudomonas phage PB1] gi|190333520|gb|ACE73775.1| helicase [Pseudomonas phage PB1] Length = 519 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 85/215 (39%), Gaps = 24/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIE---AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + + L+ E+ +F++A+ K Q+A+G + E D Sbjct: 300 KIYQRVEEDYHFVLKNEDFMLDVSFDAAAARSKLKQVASGYINVYGEPVILPPEDNPRFA 359 Query: 55 -KIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQE 103 LE ++E+ II+ ++ ++ + + I + Sbjct: 360 VFTDLLEGLLEEDPERSIIIWAMRIHEIGQIAAYLEAQGISFGAYYGETKEAEREKLIDD 419 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + ++ + +PA+ G G+ L ++ ++++ D E Q +R + G Sbjct: 420 FQAKRVQVFLGNPAAAGIGITLTA-ADVAIYYTTDEDNELRMQSEDR-----NHRIGTIN 473 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +V + LI ++IDE + L K + +++ + Sbjct: 474 SVLYFDLICLDSIDEKIQVSLEWKRNLASYVVDGV 508 >gi|270013006|gb|EFA09454.1| hypothetical protein TcasGA2_TC010670 [Tribolium castaneum] Length = 1618 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 7/118 (5%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + I E+N KI + + G+NL G N +V W+ Sbjct: 968 YYRLDGSTSALEREKLINEFNSNPKIHVFLVSTRAGSLGINL-IGANRVVVLDASWNP-- 1024 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G ++ FVY L+ N +++ + R K + D +++ + Sbjct: 1025 ---CHDTQAVCRVYRYGQRKPCFVYRLVVDNCLEKKIYDRQINKQGMSDRVVDECNPD 1079 >gi|284925122|ref|NP_001165424.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Xenopus laevis] gi|59805006|gb|AAX08100.1| Brg1 [Xenopus laevis] Length = 1600 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 74/231 (32%), Gaps = 42/231 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ +++N + + + H Sbjct: 992 LYRHMQGKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKISNHPYMFQQIEESFSEHLGFT 1051 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ + + ++ F Sbjct: 1052 GGIVQGQDVYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRGFKYLRL 1111 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D ++ +NE + + G GLNLQ + +V F W+ + Sbjct: 1112 DGTTKADDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVVIFDSDWNPHQ--- 1167 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V L N+++E +L + K + ++ A Sbjct: 1168 --DLQAQDRAHRIGPQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 1216 >gi|326482383|gb|EGE06393.1| hypothetical protein TEQG_05396 [Trichophyton equinum CBS 127.97] Length = 1130 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + ++ K+ L +++ N I+V F + Sbjct: 936 KNKEWMNSGKVDKLCELLDNYIANGDRILVFSQFTMVMDILEQVLETQKIKFFRLDGKTS 995 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 996 VEDRQSILDAFHEQVDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDIQA 1049 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1050 ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 1091 >gi|209878917|ref|XP_002140899.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209556505|gb|EEA06550.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1321 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 59/168 (35%), Gaps = 17/168 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RT 93 E + + + +I A I+ F + L + + T Sbjct: 1144 EGFESSTKINALLDEINQMILSDPDAKGIIFSQFTNMLDLVMYKLKKSNIDCALLAGSMT 1203 Query: 94 LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + +N+ + LL + G GLNLQ N + WW+ +E Sbjct: 1204 MIQRNSILYSFNKFPDLKLLLISLKAGGEGLNLQ-VANYVFLLDPWWNPA-----VELQA 1257 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G + V I ++TI+E ++Q K + D + A + Sbjct: 1258 FQRAHRIGQTKPVTAIRFIIKDTIEERMIQLQEKKQLVFDGTVGASNQ 1305 >gi|326924270|ref|XP_003208353.1| PREDICTED: DNA excision repair protein ERCC-6-like [Meleagris gallopavo] Length = 1273 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 59/246 (23%), Gaps = 56/246 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------------ 43 K Y F ++ + ++ +L + Sbjct: 364 KIYRNFL--CLDHVKELLTTTRSPLAELTVLKKLCDHPRLLSARACTQLDLDGQEYLEQD 421 Query: 44 ------------------EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---- 81 +E +E + + +V L Sbjct: 422 HGSEAAVLSGANKIDHLSDESLIQESGKMLFLLGLLERLREEGHRTLVFSQSRKMLDIIE 481 Query: 82 -----ARLQKAFPQGRTLD--KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 R + G + I + + G G+ L N +V Sbjct: 482 RVLSSRRFKIMRIDGTVTHLTEREKRINAFQSNKDYSVFLLTTQVGGVGITLTA-ANRVV 540 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ + V R + G K V +Y LI T++E + +R K ++ Sbjct: 541 IFDPSWNPAT-----DAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIRQ 595 Query: 194 LLNALK 199 K Sbjct: 596 TTGDKK 601 >gi|195430908|ref|XP_002063490.1| GK21938 [Drosophila willistoni] gi|194159575|gb|EDW74476.1| GK21938 [Drosophila willistoni] Length = 1564 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 61/177 (34%), Gaps = 15/177 (8%) Query: 34 QLANGA---VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL-----Q 85 Q++N +++ K + D + + ++ + + A + Sbjct: 884 QISNSPKMEIFFTIMKESMLLGDRILLFSQSLLTLNSIEGFLKASYVPGSHELWTRNISY 943 Query: 86 KAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + + E+N + L + G+NL G N ++ F W+ Sbjct: 944 FRLDGSTSSQERERLVNEFNSNSNVKLFLISTRAGSLGINLT-GANRVIIFDASWNP--- 999 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G + +VY ++ +++ + R K + D +++ E Sbjct: 1000 --CHDTQAVYRIYRYGQTKPCYVYRIVMDKCLEKKIYDRQIKKQGMSDRIVDECNPE 1054 >gi|222622979|gb|EEE57111.1| hypothetical protein OsJ_06974 [Oryza sativa Japonica Group] Length = 1028 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 57/158 (36%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 V KI L +E + + A I+ + + L LQ + + Sbjct: 859 VESSKISFLLQELEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLDGTLNLQQRE 918 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+E+ + I +L + G G+NL + WW+ +Q I RI Sbjct: 919 KVIKEFSEDKSILVLLMSLKAGGVGINLTA-ASNAFVMDPWWNPAVEEQAIMRI-----H 972 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G ++V + I + T++E + K + L Sbjct: 973 RIGQTKSVSIKRFIVKGTVEERMEAVQARKQRMISGAL 1010 Score = 38.2 bits (87), Expect = 0.72, Method: Composition-based stats. Identities = 14/193 (7%), Positives = 43/193 (22%), Gaps = 28/193 (14%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y R + ++ Q + +E D Sbjct: 696 YDALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVLSRGDTQEFADLNKL 755 Query: 58 ALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 A + N + + + ++ + + + ++ + + Sbjct: 756 AKRFLHGGNGAVNGDSSLPSRAYIEEVVQELQKGEGECPI-----CLEAFED-----AVL 805 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 P + S W + R +++Q + +N Sbjct: 806 TPCAHRLCRE--------CLLSSWRSASAGLCPVCRKSMSKQDLITAPTDNRFQIDVEKN 857 Query: 175 TID-ELVLQRLRT 186 ++ + L+ Sbjct: 858 WVESSKISFLLQE 870 >gi|218190874|gb|EEC73301.1| hypothetical protein OsI_07472 [Oryza sativa Indica Group] Length = 1031 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 57/158 (36%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 V KI L +E + + A I+ + + L LQ + + Sbjct: 862 VESSKISFLLQELEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLDGTLNLQQRE 921 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+E+ + I +L + G G+NL + WW+ +Q I RI Sbjct: 922 KVIKEFSEDKSILVLLMSLKAGGVGINLTA-ASNAFVMDPWWNPAVEEQAIMRI-----H 975 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G ++V + I + T++E + K + L Sbjct: 976 RIGQTKSVSIKRFIVKGTVEERMEAVQARKQRMISGAL 1013 Score = 38.2 bits (87), Expect = 0.72, Method: Composition-based stats. Identities = 14/193 (7%), Positives = 43/193 (22%), Gaps = 28/193 (14%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y R + ++ Q + +E D Sbjct: 699 YDALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVLSRGDTQEFADLNKL 758 Query: 58 ALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 A + N + + + ++ + + + ++ + + Sbjct: 759 AKRFLHGGNGAVNGDSSLPSRAYIEEVVQELQKGEGECPI-----CLEAFED-----AVL 808 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 P + S W + R +++Q + +N Sbjct: 809 TPCAHRLCRE--------CLLSSWRSASAGLCPVCRKSMSKQDLITAPTDNRFQIDVEKN 860 Query: 175 TID-ELVLQRLRT 186 ++ + L+ Sbjct: 861 WVESSKISFLLQE 873 >gi|255552483|ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223543548|gb|EEF45078.1| helicase, putative [Ricinus communis] Length = 363 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 58/177 (32%), Gaps = 23/177 (12%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQG- 91 + E K K+ AL ++ K A ++ F L L++ Sbjct: 173 SSHTDNTEISSSKRNTSSKVSALLNLLMAARDKNPTAKSVIFSQFQKMLVLLEEPLKAAG 232 Query: 92 ---------RTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 K I+E+ +L A + G+NL + + WW Sbjct: 233 FKILRLDGTMNAKKKAQVIKEFGIPGPNGPTVLLASLKASCAGINL-AAASKVYLLEPWW 291 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + +E + R + G K V V LI +N+I+E +L+ K + Sbjct: 292 NPA-----VEEQAMDRVHRIGQKEDVTVVRLITRNSIEERILEMQERKKKLAKEAFG 343 >gi|46128325|ref|XP_388716.1| hypothetical protein FG08540.1 [Gibberella zeae PH-1] gi|116090837|gb|ABJ56000.1| RING-13 protein [Gibberella zeae] Length = 1133 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 55/160 (34%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEKANAA--PIIVAYHFN-----------SDLARLQKAFPQGRTLDKDP 98 K+ ++++ I+ + + + + + + Sbjct: 958 PSSKVTECLNLVKEIEGTGEKTIIFSQWTLLLDLLQVAMKRENMAKPERYDGSMSATQRN 1017 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +G + ++ + GLNL + ++ +W+ IE V R Sbjct: 1018 IAAHNFRDGKDVRVMLVSLKAGNAGLNLTA-ASRVIIMDPFWNP-----YIEMQAVDRAY 1071 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V VY ++ T+++ ++ K + + L+ Sbjct: 1072 RIGQQKPVKVYRILTNETVEDRIVDLQNKKKEMVEAALDE 1111 Score = 41.7 bits (96), Expect = 0.062, Method: Composition-based stats. Identities = 2/68 (2%), Positives = 19/68 (27%), Gaps = 6/68 (8%) Query: 4 YHKFQRELYC----DLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + ++ ++ +++ + ++ Q + ++ + Sbjct: 698 YKQLEKNAQVLVNKYIREKSVSKNYSSILVLLLRLRQACCHPHLNLDVDDAPSTDSDEKR 757 Query: 58 ALEVIIEK 65 + + Sbjct: 758 KTVEDLNE 765 >gi|281209483|gb|EFA83651.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 934 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 62/174 (35%), Gaps = 21/174 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVI---IEKANAAPIIVAYHFNSDLA----------RLQ 85 K + + K++ ++ + I ++V ++ L+ Sbjct: 629 FPKEFNTKVSQPQYSGKLQFIDTLMQQIRNKTKDRVVVISNYTQTLSVLARLCNERGYPF 688 Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 DK + ++N+ P + + G GLNL G N L+ W+ Sbjct: 689 FQLDGSTPSDKRQVLVDKFNDPSSPQFVFLLSSKAGGIGLNL-IGANHLILVDPDWNPAN 747 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ V +Y ++ TI+E + QR TK + ++ Sbjct: 748 -----DAQAMARVWREGQKKVVSIYRTLSTGTIEEKIYQRQITKMALSVSVVEG 796 >gi|157116391|ref|XP_001658454.1| helicase [Aedes aegypti] gi|108876505|gb|EAT40730.1| helicase [Aedes aegypti] Length = 814 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 62/171 (36%), Gaps = 19/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-- 95 +Y V K + L+ ++ K +++ F L ++K Sbjct: 606 LYDLRIPDQLIVASGKFRQLDELLPKLKREGHRVLIFSQFVMMLDIMEKYLDIRHYGFLR 665 Query: 96 --------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I +N + I + + G G+NL + ++ + ++ Sbjct: 666 LDGQTAVTERQEMIDLYNQDPNIFIFLLSTKAGGLGINLTA-ADTVIIHDIDFNP----- 719 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ R + G + V +Y L+++ TI+E +L + K ++ + + Sbjct: 720 YNDKQAEDRSHRMGQTKPVTIYKLVSEGTIEEGMLMIAQEKLQLEKDVTDE 770 >gi|304438573|ref|ZP_07398512.1| Snf2 family protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368411|gb|EFM22097.1| Snf2 family protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 819 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 60/184 (32%), Gaps = 17/184 (9%) Query: 25 SASKTVKCLQLANGAVYYD-EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 + + + +H K ++ +IV F L Sbjct: 622 ILQAFLYLREACSEPQLLPLSLRHSTSCESCKYDLFKLYTPNIIKEHKKLIVFCQFPKIL 681 Query: 82 ARLQKAFPQGR--------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 +L++ + I + + K + F + G GLNL ++ Sbjct: 682 KKLKRWCDSNHWSTFYIDGNTNNRERIISLFEQSKEGIFFISLKAGGVGLNLTS-AQFVI 740 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + WW+ ER R + G + VF+Y+ I +TI+E +++ K I Sbjct: 741 IYEPWWNPSA-----ERQASDRIYRIGQDKPVFIYHFIVNDTIEEKIIELQDKKKKIYSD 795 Query: 194 LLNA 197 + A Sbjct: 796 FIAA 799 >gi|328867363|gb|EGG15746.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1933 Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 77/214 (35%), Gaps = 25/214 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLA--NGAVYYDEEKHWKEVHDEKIKALE 60 QY K E+ ++ + +A K +L G D++++ K K Sbjct: 1644 QYQKIVDEMVQKRLPIDVHSIENAPKLTSLRELLWECGIGKDDDKENGLVK---KEKDSL 1700 Query: 61 VIIEKANAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCTIQEWN-E 106 +E + ++ + L G K + +N + Sbjct: 1701 ENLEISTQHRCLIFAQTKAMLDCVESDLLKKILPSVTYLRMDGGTEQMKRQTIVNRFNAD 1760 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I LL G GLNL G + ++F W+ M + + R + G K+ V Sbjct: 1761 PTIDLLLLTTTVGGLGLNLT-GADTVIFLEHDWNP-----MKDLQAMDRAHRIGQKKVVN 1814 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 VY LI Q T++E ++ + K I + ++N + Sbjct: 1815 VYRLITQGTLEEKIMGLQKFKLNIANTIVNQENQ 1848 >gi|156358635|ref|XP_001624622.1| predicted protein [Nematostella vectensis] gi|156211413|gb|EDO32522.1| predicted protein [Nematostella vectensis] Length = 659 Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 71/210 (33%), Gaps = 32/210 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 M+ Y + + G+ + F +++K + + + L Sbjct: 386 MRNY----KPFIAEQGGKMVLLFEIIEESLKL-------------GEKILIFSQSLSTLS 428 Query: 61 VIIEKANAAPIIVAYHFNSD------LARLQKAFPQGRTLDKDPCTIQEWNEGKIP---L 111 +I E N+ + SD + + + I +N+ L Sbjct: 429 IIEEFLNSRVVPFFPGRQSDPSTKWARNKSYFRLDGSTSAQERERLINAFNDNSSNEVLL 488 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G+NL G + +V F W+ + V R + G R +Y LI Sbjct: 489 FMLSTRAGCLGVNL-VGASRVVVFDSSWNP-----CHDVQAVCRVYRYGQVRPCHIYRLI 542 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 A T+++ + R +K + + +++ L E Sbjct: 543 ATGTMEKKIYDRQVSKQGVANRVVDELNPE 572 >gi|316975430|gb|EFV58874.1| domain protein, SNF2 family [Trichinella spiralis] Length = 1023 Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 23/175 (13%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL--------- 81 +L D + K+ AL+ I+ + +++ F L Sbjct: 836 HKLCCQHKLSDSAIN----DSGKLIALDGILAEAKQQGNKVLLFSQFVIVLDVLEEFLNL 891 Query: 82 -ARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + I +N I + + G G+NL N++V + + + Sbjct: 892 KQIRYLRLDGQTPVVERQQLIDMFNSSEDIFIFLLSTRAGGLGINLTS-ANVIVLYDIDY 950 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + +R R + G K+ V V LI+++T+DE +L K ++ + Sbjct: 951 NP-----HNDRQAEDRCHRVGQKKDVHVIKLISKDTVDESMLACANKKLELERQI 1000 >gi|255561985|ref|XP_002522001.1| conserved hypothetical protein [Ricinus communis] gi|223538805|gb|EEF40405.1| conserved hypothetical protein [Ricinus communis] Length = 1447 Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 50/120 (41%), Gaps = 16/120 (13%) Query: 96 KDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++N+ ++ + G+NL N +V W+ + Sbjct: 1132 ERQRLVEKFNDPENKRVKCTLISTRAGSLGINLHA-ANRVVIVDGSWNPT-----YDLQA 1185 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-------KKETIHV 205 + R + G + VF Y L+A T++E + +R TK + +++ ++E +H+ Sbjct: 1186 IFRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISREEMLHL 1245 >gi|164426264|ref|XP_960829.2| hypothetical protein NCU10337 [Neurospora crassa OR74A] gi|157071265|gb|EAA31593.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 1404 Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 31/195 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEK--ANAAPIIVAY 75 ++ + Y + + + K+ LEV++ K +++ Sbjct: 795 LMQLRKCLCHPFVYSQSIEDRNLSPEVTKRNLIEASSKLLLLEVMLPKLRERGHRVLIFS 854 Query: 76 HFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIPLL--FAHPASCGHGL 123 F L L+ + I +N L + G G+ Sbjct: 855 QFLDQLTILEDFLAGMDLPYQRLDGSQSSMEKQKRIDAFNAPDSQLFCMLLSTRAGGVGI 914 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ W+ + + ++R + G ++ V + L+ ++ +E +LQ Sbjct: 915 NL-ATADTVIILDPDWNPHQ-----DIQALSRAHRIGQQKKVLCFQLMTVDSAEEKILQI 968 Query: 184 LRTKSTIQDLLLNAL 198 R K + LL+ + Sbjct: 969 GRKKMALDHLLIETM 983 >gi|330935743|ref|XP_003305110.1| hypothetical protein PTT_17857 [Pyrenophora teres f. teres 0-1] gi|311318056|gb|EFQ86823.1| hypothetical protein PTT_17857 [Pyrenophora teres f. teres 0-1] Length = 2332 Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 66/176 (37%), Gaps = 11/176 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + + D + +I + + F + Sbjct: 1354 RQSIAFPDKRLLQYDCGKLQ----RLATLLRDLQAGGHRALIFTQMTKVLDILEQFLNIH 1409 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N + +I S G G+NL G + ++F+ L W+ Sbjct: 1410 GYRYLRLDGSTKIEQRQILTDRFNTDPRILCFILSSRSGGLGINLT-GADSVIFYDLDWN 1468 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +++ R + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1469 PA-----MDKQCQDRAHRIGQTRDVHIYKFVSEYTIEANILRKSNQKRLLDDVIIQ 1519 >gi|189235501|ref|XP_969437.2| PREDICTED: similar to lodestar CG2684-PA [Tribolium castaneum] Length = 1103 Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 72/199 (36%), Gaps = 20/199 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIV 73 + E A N A++ V + + G + E KI+AL +++ IV Sbjct: 653 EEEPRVAANLANEGVGLKEASKGYLNPTNPVFMTERPSSKIRALINLLKNKISGEDKAIV 712 Query: 74 AYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGH 121 + S L + + K + +N+ +L + G Sbjct: 713 VSQWTSLLHLVAIHLENEGIPYASLDGSVVVQKRMPIVDNFNDPNSATKVLLLSLTAGGV 772 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL G N L L W+ + E R + G K+ ++VY +A TI+E + Sbjct: 773 GLNL-VGANHLFLLDLHWNPQL-----ENQAQDRIYRMGQKKDIYVYKFMALETIEERIK 826 Query: 182 QRLRTKSTIQDLLLNALKK 200 K I + +L K+ Sbjct: 827 ALQERKLEIANAMLTGSKQ 845 Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 15/48 (31%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 +Y K + +L + + + ++ Q+ + E Sbjct: 578 EYFKMRNKLLKLNRVKEVSQHEILVLLLRLRQICCHPSLIKQMLQGDE 625 >gi|19114529|ref|NP_593617.1| fun thirty related protein Fft3 [Schizosaccharomyces pombe 972h-] gi|46397090|sp|O42861|YFC1_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C25A8.01c gi|2864632|emb|CAA16951.1| fun thirty related protein Fft3 [Schizosaccharomyces pombe] Length = 922 Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 62/178 (34%), Gaps = 21/178 (11%) Query: 32 CLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR---- 83 L + + K + K++ L+ ++ N +++ F L Sbjct: 737 LHNLCCKFPSINSFQLKDEPWMDATKVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQLV 796 Query: 84 -------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + + Q + + I + + G G+NL N+++ + Sbjct: 797 MKSLNLKFLRFDGSTQVDFRQDLIDQFYADESINVFLLSTKAGGFGINL-ACANMVILYD 855 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + ++ + + R + G K+ V VY + ++TI+E + + K + L Sbjct: 856 VSFNPFD-----DLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRLANAKIALDATL 908 >gi|307204540|gb|EFN83220.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Harpegnathos saltator] Length = 847 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 62/164 (37%), Gaps = 19/164 (11%) Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K+K L+ ++ K + I++ F L L++ + + I Sbjct: 649 GKLKHLDELLPRLKKDGHRILIFSQFTMVLDILEEYLTIRGQTFIRLDGSTPVTERQSLI 708 Query: 102 QEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+ I + + G G+NL + ++ + ++ ++ R + G Sbjct: 709 NEYTQNSSIFIFLLSTRAGGLGINLTA-ADTVIIHDIDFNP-----YNDKQAEDRCHRVG 762 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 K+ V + L+++ TI+E + + + K ++ + + E Sbjct: 763 QKKPVTIIRLLSKGTIEESMYEIAQEKLHLEQQITGNEENEGTD 806 >gi|158298992|ref|XP_319118.4| AGAP009980-PA [Anopheles gambiae str. PEST] gi|157014154|gb|EAA13923.4| AGAP009980-PA [Anopheles gambiae str. PEST] Length = 881 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 63/170 (37%), Gaps = 19/170 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ------- 90 +Y + K + L+ ++ K +++ F L +++ Sbjct: 670 LYDLQLPEKLITSSGKFRQLDELLPKMKEEGHRVLIFSQFTMMLDIMERYLKIRKHGFLR 729 Query: 91 ---GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + I ++ + + + + G G+NL + ++ + ++ Sbjct: 730 LDGSTAVTERQELIDQYTQDPDLFIFLLSTKAGGLGINLTA-ADTVIIHDIDFNP----- 783 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ R + G K+ V +Y LI++ TI+E +L + K ++ + Sbjct: 784 YNDKQAEDRAHRMGQKKPVTIYKLISEGTIEEGMLMIAQQKLQLEKDVTE 833 >gi|254568488|ref|XP_002491354.1| RING finger protein involved in proteolytic control of sumoylated substrates [Pichia pastoris GS115] gi|238031151|emb|CAY69074.1| RING finger protein involved in proteolytic control of sumoylated substrates [Pichia pastoris GS115] gi|328352132|emb|CCA38531.1| Putative DNA helicase ino80 [Pichia pastoris CBS 7435] Length = 1140 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 69/207 (33%), Gaps = 25/207 (12%) Query: 3 QYHKFQRE--LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K + D+ + + + D+ ++ ++ Sbjct: 923 VYDKIVNQHISVMDIVKSESPVLSKIEMIQQLI------RENKGVFESSAKIDKAVEMIQ 976 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNEGKI 109 ++ IIV F + ++ + ++D + + + Sbjct: 977 ELLRDNPGEKIIVFSQFTTLFDVIEVILKENNIKFIRYDGSMSLSNRDAAIQEFYESTEK 1036 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ + GL L + ++ +W+ +E + R + G R VFVY Sbjct: 1037 NVMLLSLKAGNVGLTLT-CASRVIIMDPFWNP-----YVEDQAMDRAHRIGQLREVFVYR 1090 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ +NT+++ +L TK I + L+ Sbjct: 1091 MLIKNTVEDRILTIQNTKREIVENALD 1117 >gi|115401476|ref|XP_001216326.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114190267|gb|EAU31967.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 966 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 25/198 (12%), Positives = 68/198 (34%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYY-------DEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN- 78 ++ + + K + L ++ + +I+ F Sbjct: 465 LMELRKCCIHPYLLDGVMPWPYQVGIDLITQSGKFQVLSKLVRRFVSEQKKVIIFSGFEG 524 Query: 79 ---------------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 D R + Q + ++ T N+ + + + G GL Sbjct: 525 ALDLCEDMLSLLQTSFDPFRYVRLDGQTPSAVRNLSTYLFRNDERYLVFLISIRAGGEGL 584 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++F W+ ++ + +R + G + V ++ + ++ T++E + +R Sbjct: 585 NLT-CSSTIIFLDEDWNPQQM-----KQACSRVHRIGQTKPVEIFRIQSRGTVEEQMARR 638 Query: 184 LRTKSTIQDLLLNALKKE 201 L K+ + D + ++ + Sbjct: 639 LEKKAYMADRVTERVRSQ 656 >gi|258564558|ref|XP_002583024.1| DNA repair protein RAD16 [Uncinocarpus reesii 1704] gi|237908531|gb|EEP82932.1| DNA repair protein RAD16 [Uncinocarpus reesii 1704] Length = 896 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 53/155 (34%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ + T + +I + N + Sbjct: 734 KLRSKKQTHKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMTPVQRQKSIDYFMNNVDV 793 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 794 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITK 847 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + +N + E + Sbjct: 848 LCIEDSVESRMVLLQEKKANMINGTINKDQSEALE 882 >gi|255933007|ref|XP_002557974.1| Pc12g11570 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582593|emb|CAP80784.1| Pc12g11570 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1229 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 6/106 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + I +L A + G GLNL + + ++ Q I+RI Sbjct: 1113 RTRALEEFAKNDNIKVLLATIGAGGVGLNLTS-ASRVFIMEPQYNPAAVAQAIDRI---- 1167 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V + I + +I+E +L R K + D LN +K++ Sbjct: 1168 -HRLGQTRPVQTFQFIMKGSIEEKILDLARKKQEMADTSLNRVKQD 1212 >gi|189197581|ref|XP_001935128.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981076|gb|EDU47702.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1676 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 66/176 (37%), Gaps = 11/176 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + A + LQ G + + + D + +I + + F + Sbjct: 1353 RQSIAFPDKRLLQYDCGKLQ----RLATLLRDLQAGGHRALIFTQMTKVLDILEQFLNIH 1408 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ +N + +I S G G+NL G + ++F+ L W+ Sbjct: 1409 GYRYLRLDGSTKIEQRQILTDRFNTDPRILCFILSSRSGGLGINLT-GADSVIFYDLDWN 1467 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +++ R + G R V +Y +++ TI+ +L++ K + D+++ Sbjct: 1468 PA-----MDKQCQDRAHRIGQTRDVHIYKFVSEYTIEANILRKSNQKRLLDDVIIQ 1518 >gi|308807621|ref|XP_003081121.1| DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; i (ISS) [Ostreococcus tauri] gi|116059583|emb|CAL55290.1| DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; i (ISS) [Ostreococcus tauri] Length = 730 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 7/99 (7%) Query: 97 DPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++++N G ++ + G GLNL G N L+ + W+ +R + R Sbjct: 532 RTSIVKDFNNGDGGQVMLLSVVAGGAGLNL-VGANRLILMDVSWNPAH-----DRQAMGR 585 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G ++ V +Y LI T+++ V +R K +++ + Sbjct: 586 VWRDGQRKPVTIYRLITSGTVEQKVFERQLGKEVLKNTV 624 >gi|323449633|gb|EGB05519.1| hypothetical protein AURANDRAFT_30762 [Aureococcus anophagefferens] Length = 603 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 55/144 (38%), Gaps = 22/144 (15%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD--------------KDPCTIQEWNEGKIPLLF 113 + +++ F L L++ + ++ +N + + Sbjct: 466 GSRVLLFSQFTLTLDVLEEYCAAHHGDRGVGYLRLDGATGRIQREMDMRSFNASESKIFL 525 Query: 114 --AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+NL + +V + W+ + ++ + R + G + V VY LI Sbjct: 526 YLISTRAGGQGINL-ATADTVVLYDTCWNPQ-----VDLQAMDRAHRIGQRGQVTVYRLI 579 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 A++T++E V R K + L++ Sbjct: 580 ARDTVEEKVHARAHQKLLLDALVM 603 >gi|261196956|ref|XP_002624881.1| DNA excision repair protein [Ajellomyces dermatitidis SLH14081] gi|239596126|gb|EEQ78707.1| DNA excision repair protein [Ajellomyces dermatitidis SLH14081] Length = 1026 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 17/171 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 QL + + K+ + N ++V H L LQ F Sbjct: 595 RQLYATRDSILNYANHEFCGKWKVLKKLLRWWHGNGDKVLVFSHSVRLLKMLQMLFKHTS 654 Query: 91 --------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + D + +N + + + + G GLN+ N +V W+ Sbjct: 655 YNVSYLDGAMSYDDRTKAVDSFNADPREFVFLISTRAGGVGLNITS-ANKVVVVDPNWNP 713 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R V V+ L++ TI+E+V R K + Sbjct: 714 A-----YDLQAQDRAYRIGQSRDVEVFRLVSAGTIEEIVYARQIYKQQQAN 759 >gi|302307173|ref|NP_983750.2| ADL345Cp [Ashbya gossypii ATCC 10895] gi|299788872|gb|AAS51574.2| ADL345Cp [Ashbya gossypii ATCC 10895] Length = 746 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 54/169 (31%), Gaps = 21/169 (12%) Query: 52 HDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 KI+AL + IV F S L ++ + T + Sbjct: 573 SSTKIEALLEELYNLRSSTRTIKSIVFSQFTSMLDLVEWRLKRAGFQTAKLQGSMTPTQR 632 Query: 98 PCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 TI + + + + G LNL + + WW+ Q +R+ Sbjct: 633 AETINYFMDNVHCEVFLVSLKAGGVALNL-CEASQVFILDPWWNPSVEWQSGDRV----- 686 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G R V + +++I+ +++ K+ + L + + Sbjct: 687 HRIGQHRPVKITRFCIEDSIESRIIELQEKKANMIHATLGQDEGAVNRL 735 >gi|331224559|ref|XP_003324951.1| RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309303941|gb|EFP80532.1| RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 789 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 56/170 (32%), Gaps = 23/170 (13%) Query: 52 HDEKIKALEVIIEKAN------AAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L ++++ IV F S L ++ + Sbjct: 553 SSTKVSRLLELLDEIKAEDTKTPKKTIVFSQFTSFLNLIEPFIKKAGYGYTRYDGAKSPD 612 Query: 98 ---PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++ K +L GLNL + ++ WW+ IE Sbjct: 613 EKTRALEKIKSDPKCTVLLISLKCGSVGLNLT-CCSRVILMDPWWNPS-----IETQAFD 666 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G + V Y + +TI++ +LQ K ++ + L + ++ Sbjct: 667 RAHRFGQRDDVKCYKITIADTIEDRILQLQEDKQSLANQALGTEAAKKMN 716 >gi|218195896|gb|EEC78323.1| hypothetical protein OsI_18057 [Oryza sativa Indica Group] Length = 987 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 54/161 (33%), Gaps = 19/161 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ + +++ + +++ L +Q+ + + Sbjct: 636 SCKLSFMMSLLQNLVSEGHNVLIFSQTRKMLNIIQEAIILEGYKFLRIDGTTKISERERI 695 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++ EG P+ G GL L ++ W+ Q ++R + Sbjct: 696 VKDFQEGPGAPIFLLTTQVGGLGLTLTKAA-RVIVVDPAWNPSTDNQSVDR-----AYRI 749 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G + V VY L+ TI+E + + K + ++ Sbjct: 750 GQMKDVIVYRLMTSGTIEEKIYKLQVFKGALFRTATEHKEQ 790 >gi|209875245|ref|XP_002139065.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209554671|gb|EEA04716.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1085 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 6/108 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + N+ I L G GLN+ G N ++ + WW+ + Sbjct: 723 PVVSRFSLVERFNNDSSIFLFILTSRVGGVGLNI-MGANRIILYDPWWNPMT-----DAQ 776 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + V VY LI ++T++E + QR K I + +L K Sbjct: 777 AKERCWRIGQDKEVIVYRLITKDTVEEKIYQRQLFKQFIANQILQDAK 824 >gi|116202151|ref|XP_001226887.1| hypothetical protein CHGG_08960 [Chaetomium globosum CBS 148.51] gi|88177478|gb|EAQ84946.1| hypothetical protein CHGG_08960 [Chaetomium globosum CBS 148.51] Length = 890 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 54/176 (30%), Gaps = 19/176 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKA---------- 87 + KI+ L I+ +A+ IV F S L ++ Sbjct: 655 HSIGTGSSSNSVMTSAKIRELLSILRKEASVHKFIVFSQFTSMLDLVEPFLRAQPGLKAV 714 Query: 88 -FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + D ++ + +L GLNL +V +W+ Sbjct: 715 RYDGKMPNDAREAALRALRTDPHTRILLCSLKCGSLGLNLTA-ATRVVIVEPFWNP---- 769 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +E + R + V VY L +T++ +L K + + L ++ Sbjct: 770 -FVEEQAIDRVHRLTQTVDVVVYKLTVADTVEARILALQDKKRRLAEATLEGGSRK 824 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 10/118 (8%), Positives = 32/118 (27%), Gaps = 14/118 (11%) Query: 4 YHKFQ---RELYCDLQGENIEAFNSASKTVKCLQLANGAVY-------YDEEKHWKEVHD 53 Y K + + + + N+ ++ Q N E + Sbjct: 402 YDKLEARADKSLEKMMKGKVNYANALVLLLRLRQACNHPRLSETKLEKDSEALNADTAPQ 461 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 K A + + + + + + S ++ + + + + +I + Sbjct: 462 PKPSAADDL----DDLAECLWWQWASRRSKKSTTRARAERSQRRRTGESAFVKEEIKI 515 >gi|312214231|emb|CBX94225.1| hypothetical protein [Leptosphaeria maculans] Length = 938 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 61/209 (29%), Gaps = 43/209 (20%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--------------------- 63 + ++ N + ++ L +I Sbjct: 577 ALQLINVLKKVCNSPSLLKSSTDNDDTPSALLQTLLPLIPPQILNSSASSTKLRLLDSLV 636 Query: 64 ---EKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN---EG 107 I++ ++ + L +++ K + ++N + Sbjct: 637 HRIHTTTDEKIVIVSNYTTTLDMIERLLTSLSYTYLRLDGSTPAAKRQPLVNKFNTSSKS 696 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 S G G+NL G + +V F W+ + + R + G K + Sbjct: 697 TAFAFLLSAKSGGVGINL-IGASRIVLFECDWNPAT-----DLQAMARIHREGQKLPCKI 750 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y + + +DE + QR +K + +++ Sbjct: 751 YRFLIKGGLDEKIYQRQVSKMGLAGAVVD 779 >gi|255956037|ref|XP_002568771.1| Pc21g17740 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590482|emb|CAP96671.1| Pc21g17740 [Penicillium chrysogenum Wisconsin 54-1255] Length = 968 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 62/169 (36%), Gaps = 20/169 (11%) Query: 47 HWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQ-----------GR 92 KI+ L I+ +A +V + S L ++ Q + Sbjct: 789 DHPNSPSSKIETLVKILTAQGQAPGTKTVVFSQWTSFLDLIEPHLQQRGVKFARVDGKMQ 848 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +D ++ + +L A + C GLNL N ++ WW IE Sbjct: 849 SVKRDNSINSFSSDTQCTILLASLSVCSVGLNLVA-ANQVILCDSWWAPA-----IEDQA 902 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V R + G KR V+ L+ +++I+E VL K + K+ Sbjct: 903 VDRVYRLGQKRETTVWRLVMEDSIEERVLAIQERKRRLMLAAFRETAKK 951 >gi|297741293|emb|CBI32424.3| unnamed protein product [Vitis vinifera] Length = 1112 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 9/132 (6%) Query: 74 AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 + +++K + +++ + + G GLNL GGN Sbjct: 747 FAQLCRERRYPYLRLDGTTSINKRQKLVNRFSDPLKDEFVFLLSSKAGGCGLNL-IGGNR 805 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 LV F W+ ++ R + G K+ V++Y ++ TI+E V QR +K +Q Sbjct: 806 LVLFDPDWNPAN-----DKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQ 860 Query: 192 DLLLNALKKETI 203 ++ +K+++ Sbjct: 861 -KVIQQEQKDSL 871 >gi|302911947|ref|XP_003050605.1| hypothetical protein NECHADRAFT_123411 [Nectria haematococca mpVI 77-13-4] gi|256731542|gb|EEU44892.1| hypothetical protein NECHADRAFT_123411 [Nectria haematococca mpVI 77-13-4] Length = 1066 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 63/198 (31%), Gaps = 22/198 (11%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 DL+ IE + K + N E + + L + + I+ Sbjct: 863 DLEQPEIEQDEALVKKNS---IIN--RIKMENWTSSSKIELLVHELHKLRSDNASHKSII 917 Query: 74 AYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHG 122 F + L ++ T + +I+ + N + + G Sbjct: 918 FSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASIEHFMNNVDVECFLVSLKAGGVA 977 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + + WW+ Q +R + G R + L +++++ ++ Sbjct: 978 LNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQTRPCTITRLCIEDSVESRMVL 1031 Query: 183 RLRTKSTIQDLLLNALKK 200 K+++ +NA K Sbjct: 1032 IQEKKTSMIHSTVNADDK 1049 >gi|302502694|ref|XP_003013308.1| hypothetical protein ARB_00493 [Arthroderma benhamiae CBS 112371] gi|291176871|gb|EFE32668.1| hypothetical protein ARB_00493 [Arthroderma benhamiae CBS 112371] Length = 1110 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + ++ K+ L +++ N I+V F + Sbjct: 916 KNKEWMNSGKVDKLCELLDNYIANGDRILVFSQFTMVMDILELVLETQKIKFFRLDGKTS 975 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 976 VEDRQSILDAFHEQVDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDIQA 1029 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1030 ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 1071 >gi|260951227|ref|XP_002619910.1| hypothetical protein CLUG_01069 [Clavispora lusitaniae ATCC 42720] gi|238847482|gb|EEQ36946.1| hypothetical protein CLUG_01069 [Clavispora lusitaniae ATCC 42720] Length = 1061 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 19/156 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPC 99 K+ L +I++ I+V F L L+K Sbjct: 888 DSGKVAKLLDLIKQTIMKKEKILVFSLFTQMLDILEKVLSFANISFLRLDGQTSVDTRQD 947 Query: 100 TIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + + IP+ + G G+NL N +V F ++ + ++ R + Sbjct: 948 IIDRFYEDEDIPVFLLSTKAGGFGINLVA-ANNVVIFDQSFNPHD-----DKQAEDRAHR 1001 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G V V LI++NTIDE +L K + + Sbjct: 1002 VGQTNEVMVTKLISENTIDENILMLAENKLQLDQSI 1037 >gi|321445102|gb|EFX60594.1| hypothetical protein DAPPUDRAFT_308061 [Daphnia pulex] Length = 190 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 9/126 (7%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGG 129 + A HF R + ++++N P++ + G GLNL GG Sbjct: 34 LFAQHFRRMRIR-CHLIAGSVAIKHRTEIVEDFNGNPDGAPVILLSLGAGGVGLNL-IGG 91 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 N + + W+ + Q +R+ + G + V V+ +I Q T++E +LQ + K Sbjct: 92 NHIFIADMHWNPQLEAQACDRV-----YRVGQTKDVHVHRMITQGTVEERILQLQQEKLA 146 Query: 190 IQDLLL 195 + + +L Sbjct: 147 MANGIL 152 >gi|327292821|ref|XP_003231108.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] gi|326466738|gb|EGD92191.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] Length = 1143 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 60/162 (37%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + ++ K+ L +++ N I+V F + Sbjct: 949 KNKEWMNSGKVDKLCELLDNYIANGDRILVFSQFTMVMDILEQVLETQKIKFFRLDGKTS 1008 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++E ++P+ + G G+NL N ++ F ++ + + Sbjct: 1009 VEDRQSILDAFHEQVEVPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDIQA 1062 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1063 ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 1104 >gi|302416497|ref|XP_003006080.1| DNA repair protein RAD16 [Verticillium albo-atrum VaMs.102] gi|261355496|gb|EEY17924.1| DNA repair protein RAD16 [Verticillium albo-atrum VaMs.102] Length = 983 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 62/198 (31%), Gaps = 22/198 (11%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 DL+ IE + K + N EE + + L + IV Sbjct: 780 DLEQPEIEQDQAMV---KKSSIIN--RIKMEEWTSSSKIETLVYELHKLRSDKATHKSIV 834 Query: 74 AYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHG 122 +F S L ++ T + +I + ++ + G Sbjct: 835 FSNFTSMLQLIEWRLRRAGVTTVMLDGSMTPAQRQASIDHFMKNPEVECFLVSMKAGGVA 894 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + + WW+ Q +R + G R + L +++++ ++Q Sbjct: 895 LNLTE-ASHVFIVDPWWNPAAEWQSADRC-----HRIGQGRPCTITRLCIEDSVESRIVQ 948 Query: 183 RLRTKSTIQDLLLNALKK 200 K+ + +N K Sbjct: 949 LQEKKTNMIHSTVNGDDK 966 >gi|256070735|ref|XP_002571698.1| helicase [Schistosoma mansoni] gi|238656844|emb|CAZ27928.1| helicase, putative [Schistosoma mansoni] Length = 1035 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 48/139 (34%), Gaps = 17/139 (12%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPA 117 +++ L +Q + + + + Sbjct: 366 HKVLIFSQMTRMLDIIQDYLTLRGYSYERLDGSVRGEDRFQAVKSFNEDQETFVFLLSTR 425 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLNL + ++F ++ + I+ R + G K+ V + L+ ++T++ Sbjct: 426 AGGQGLNLVS-ADTVIFVDSDFNPQ-----IDVQAAGRAHRIGQKKPVRIVRLVCRHTVE 479 Query: 178 ELVLQRLRTKSTIQDLLLN 196 E +L R K + +LN Sbjct: 480 EAILSRAENKLKLATRVLN 498 >gi|162312350|ref|XP_001713034.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe 972h-] gi|548669|sp|P36607|RAD5_SCHPO RecName: Full=DNA repair protein rad5 gi|443973|emb|CAA52686.1| rad8 [Schizosaccharomyces pombe] gi|159883887|emb|CAA89964.2| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe] Length = 1133 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 59/162 (36%), Gaps = 18/162 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTI 101 + + L + + +++ F + L + + Sbjct: 966 NGLLGQLRQLTHSSEPEKVVIFSQFTTFLDIIADVLESEKMGYARFDGTMSQQMRSTALE 1025 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N+ + +L + G GLNL N + WW Q I+RI + G Sbjct: 1026 TFRNDPDVNVLIISLKAGGVGLNLT-CANHVFIMDPWWSWSVEAQAIDRI-----HRLGQ 1079 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL-LNALKKET 202 ++ VFV I ++T++E +L+ K+ I L ++ K++ Sbjct: 1080 EKPVFVTRYIVRDTVEERMLKIQERKNFITGTLGMSEGKQQV 1121 Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats. Identities = 6/59 (10%), Positives = 12/59 (20%), Gaps = 6/59 (10%) Query: 2 KQYHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 K Y + + + ++ Q V E D+ Sbjct: 777 KIYDSLYTKAKSTVNANIVAGTLFRNYTTILGLLLRLRQACCDPVLLSNMTINSETFDD 835 >gi|326433455|gb|EGD79025.1| helicase DNA-binding protein [Salpingoeca sp. ATCC 50818] Length = 1742 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 44/121 (36%), Gaps = 9/121 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + I+ +N+ + + G++L + +V W+ Sbjct: 1190 HYFRLDGSTSASERADMIEAFNDRSNLDMHAFLISTRAGSLGISLTA-ASRVVILDTSWN 1248 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + V R + G + F+Y L+A T++E + R TK + + +++ Sbjct: 1249 PSH-----DAQAVCRVYRYGQDKPCFIYRLVAAGTMEETIYNRQVTKVGLANRVVDTENP 1303 Query: 201 E 201 E Sbjct: 1304 E 1304 >gi|209945934|gb|ACI97198.1| okra [Drosophila simulans] gi|209945936|gb|ACI97199.1| okra [Drosophila simulans] gi|209945938|gb|ACI97200.1| okra [Drosophila melanogaster] gi|209945940|gb|ACI97201.1| okra [Drosophila simulans] gi|209945944|gb|ACI97203.1| okra [Drosophila melanogaster] gi|209945946|gb|ACI97204.1| okra [Drosophila melanogaster] gi|209945948|gb|ACI97205.1| okra [Drosophila melanogaster] gi|209945950|gb|ACI97206.1| okra [Drosophila melanogaster] gi|209945952|gb|ACI97207.1| okra [Drosophila melanogaster] gi|209945954|gb|ACI97208.1| okra [Drosophila melanogaster] gi|209945956|gb|ACI97209.1| okra [Drosophila melanogaster] gi|209945958|gb|ACI97210.1| okra [Drosophila melanogaster] gi|209945962|gb|ACI97212.1| okra [Drosophila melanogaster] gi|209945964|gb|ACI97213.1| okra [Drosophila melanogaster] gi|209945966|gb|ACI97214.1| okra [Drosophila melanogaster] gi|209945968|gb|ACI97215.1| okra [Drosophila melanogaster] gi|209945970|gb|ACI97216.1| okra [Drosophila melanogaster] gi|209945972|gb|ACI97217.1| okra [Drosophila melanogaster] gi|209945974|gb|ACI97218.1| okra [Drosophila melanogaster] gi|209945976|gb|ACI97219.1| okra [Drosophila melanogaster] gi|209945978|gb|ACI97220.1| okra [Drosophila melanogaster] gi|209945980|gb|ACI97221.1| okra [Drosophila melanogaster] gi|209945982|gb|ACI97222.1| okra [Drosophila melanogaster] gi|209945984|gb|ACI97223.1| okra [Drosophila melanogaster] gi|209945986|gb|ACI97224.1| okra [Drosophila melanogaster] gi|209945990|gb|ACI97226.1| okra [Drosophila melanogaster] gi|209945992|gb|ACI97227.1| okra [Drosophila melanogaster] gi|209945996|gb|ACI97229.1| okra [Drosophila melanogaster] gi|209945998|gb|ACI97230.1| okra [Drosophila melanogaster] gi|209946000|gb|ACI97231.1| okra [Drosophila melanogaster] gi|209946002|gb|ACI97232.1| okra [Drosophila melanogaster] Length = 168 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIER 150 ++ K + +N+ + +S G L G N L F W+ + Sbjct: 76 MSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DE 130 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + R + G K+ ++Y L+A +I+E +LQR K Sbjct: 131 QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKK 168 >gi|148228350|ref|NP_001084942.1| transcription termination factor, RNA polymerase II [Xenopus laevis] gi|47122916|gb|AAH70581.1| MGC81081 protein [Xenopus laevis] Length = 1187 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/239 (10%), Positives = 58/239 (24%), Gaps = 68/239 (28%) Query: 21 EAFNSASKTVKCLQLANG------------------------------------------ 38 + S ++ Q Sbjct: 936 STVHILSLLLRLRQCCGHLSLLKVVLEQLELKSEGLSLTLEEQLSALSLTECQGPDPKST 995 Query: 39 --------AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 + + + L+ I + A ++ + S L + Sbjct: 996 VSLNGTNFPSELFDTESQSTKISSLVSELKTIRSSSEAQKSVIVSQWTSMLKIVAVHLKL 1055 Query: 88 -------FPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + ++++N ++ G GGN L + Sbjct: 1056 IGLSCATIDGSVNPKQRMDMVEDFNNNPKGPQVMLVSL-CAGGVGLNLVGGNHLFLMDMH 1114 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q +RI + G ++ V ++ + T++E + Q K + +L+ Sbjct: 1115 WNPALEDQACDRI-----YRVGQQKDVVIHRFVCLGTVEEKISQLQEKKKDLAKKVLSG 1168 >gi|121712768|ref|XP_001273995.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1] gi|119402148|gb|EAW12569.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1] Length = 953 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 61/165 (36%), Gaps = 20/165 (12%) Query: 52 HDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KD 97 KI+AL I+ +V + S L ++ + R +D Sbjct: 780 PSSKIEALIKILTAQGQALGTKTVVFSQWTSFLNLVEPHLQRHRISFVRIDGSMSSTARD 839 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T + N+ +L A + C GLNL N + WW IE V R Sbjct: 840 SSTYKFSNDPGCKVLLASLSVCSVGLNLVA-ANQAILADSWWAPT-----IEDQAVDRVY 893 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G KR V+ L+ +NTI++ VL+ TK + K+ Sbjct: 894 RLGQKRETTVWRLVMENTIEDRVLEIQDTKRKLMLAAFRETSKKV 938 >gi|255573018|ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223533174|gb|EEF34931.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 1028 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 19/168 (11%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDP 98 V K+ L +E +++ + I+ + + L LQ + + Sbjct: 859 VESSKVIVLLQELENLRSSGSKSILFSQWTAFLDLLQIPLSRSGISYVRLDGTLNQQQRE 918 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+++ + I +L + G G+NL + WW+ +Q + RI Sbjct: 919 RVIKQFSEDDSILVLLMSLKAGGVGINLTA-ASNAFVMDPWWNPAVEEQAVMRI-----H 972 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G + V + I + T++E + K + L + T + Sbjct: 973 RIGQTKPVMIKRFIVKGTVEERMEAVQARKQRMVSGALTDQEVRTARI 1020 Score = 36.3 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 22/193 (11%), Positives = 49/193 (25%), Gaps = 26/193 (13%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + + ++ Q + +E D Sbjct: 694 YEALFKRSKVKFNQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKL 753 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 A + N L + P +++ +++ ++G+ P+ Sbjct: 754 AKRFLKGGQN------------MLEGEARDVPSRAYVEEVVEELRKGDQGECPICL---- 797 Query: 118 SCGHGLNLQYGGNIL---VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 L + L + W + + R VTRQ I +N Sbjct: 798 EAFEDAVLTLCAHRLCRECLLASWRNSTSGLCPVCRKIVTRQELITAPTDSRFQIDIEKN 857 Query: 175 TID-ELVLQRLRT 186 ++ V+ L+ Sbjct: 858 WVESSKVIVLLQE 870 >gi|209945988|gb|ACI97225.1| okra [Drosophila melanogaster] Length = 168 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIER 150 ++ K + +N+ + +S G L G N L F W+ + Sbjct: 76 MSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DE 130 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + R + G K+ ++Y L+A +I+E +LQR K Sbjct: 131 QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKK 168 >gi|322699637|gb|EFY91397.1| putative DNA repair protein RAD26 [Metarhizium acridum CQMa 102] Length = 1075 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 17/157 (10%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDK 96 + + K+ + N ++V H L LQ + ++ Sbjct: 547 NPEFCGKWKVMKKLLRFWHQNGDKVLVFSHSVRLLRILQHLFTSTSYNVSYLDGSLSYEE 606 Query: 97 DPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + + G GLN+ N +V W+ + R Sbjct: 607 RQDVVDTFNSDPTQFVFLISTKAGGVGLNITS-ANKVVIVDPHWNPS-----YDLQAQDR 660 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G R V V+ LI+Q T++E+V R K + Sbjct: 661 AYRIGQTRDVEVFRLISQGTVEEIVYARQVYKQQQAN 697 >gi|170577655|ref|XP_001894090.1| Type III restriction enzyme, res subunit family protein [Brugia malayi] gi|158599485|gb|EDP37070.1| Type III restriction enzyme, res subunit family protein [Brugia malayi] Length = 805 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 65/212 (30%), Gaps = 49/212 (23%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKE-----------------------------VHDEKI 56 + +L N + K K+ Sbjct: 421 LTLIDALRKLCNHPFLLYQSMVVKRQTCKVEEREFYNAFLQSFPNTFNAFSLSTTDSGKL 480 Query: 57 KALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 ++ + +++ +F L L++ K ++E+ Sbjct: 481 NVFVELLATFREQEEKVVIVSNFTQTLDLLEELCRTLYYTILRLDGSTEAKKRMEIVEEF 540 Query: 105 NEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N + G GLNL G N ++ F W+ Q + RI + G + Sbjct: 541 NSLSNKNYAFLLSAKAGGLGLNL-VGANRMILFDSDWNPAVDMQAMARIW-----RQGQE 594 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + ++ LI T+DE +LQR KS++ ++ Sbjct: 595 KPCHIFRLITAGTVDEKILQRQIKKSSLNTIV 626 >gi|33086941|gb|AAP92713.1| Swi2/Snf2-related protein DDM1 [Arabidopsis arenosa] Length = 764 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 67/196 (34%), Gaps = 37/196 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA---------------NAAPII 72 ++ + N + + +E I+ + N ++ Sbjct: 489 LMIQLRKNCNHP----DLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVL 544 Query: 73 VAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNE--GKIPLLFAHPASCG 120 + + L + F + LD+ I+++++ + + G Sbjct: 545 IFSQWTKLLDIMDYYFSEKGFEVCRIDGQVKLDERRRQIKDFSDEKSSCSIFLLSTRAGG 604 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + + + W+ + ++ + R + G + V VY L +++ V Sbjct: 605 LGINLTA-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTKPVHVYRLSTAQSVETRV 658 Query: 181 LQRLRTKSTIQDLLLN 196 L+R +K ++ +++ Sbjct: 659 LKRAYSKLKLEHVVIG 674 >gi|222618922|gb|EEE55054.1| hypothetical protein OsJ_02753 [Oryza sativa Japonica Group] Length = 755 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 27/221 (12%), Positives = 59/221 (26%), Gaps = 54/221 (24%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKE-------------------------------VHD 53 + ++ N +E + Sbjct: 414 KLTPYQLLQKICNHPQNLTAVDSCEEQLALKENRTLQGIVKKLEALIAKNTTKTSNCLKS 473 Query: 54 EKIKALEVIIE------KANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKD 97 K+ + +++ K +++ L T K Sbjct: 474 CKLTFILQLLKTWQEKLKEEGHKVLIFSQTRLMLDEIEEALTNKGVHFARMDGTVTASKR 533 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ + P+ G GLNL + ++ W+ Q ++R+ Sbjct: 534 EAIIKGFQSKDGPPIFLMTTKVGGIGLNLTN-ASRVIIADPSWNPSLDNQCVDRV----- 587 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V +Y LI TI+E + ++ +K I Sbjct: 588 YRIGQEKNVIIYRLITSCTIEERIYEKQVSKEGIFKAATEE 628 >gi|194874444|ref|XP_001973399.1| GG13364 [Drosophila erecta] gi|190655182|gb|EDV52425.1| GG13364 [Drosophila erecta] Length = 880 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 49/143 (34%), Gaps = 18/143 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIP--LL 112 K+ +++ L L+ + + I +N + Sbjct: 6 KSQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVF 65 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + +R + G V +Y + Sbjct: 66 LLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAFSRAHRIGQANKVMIYRFVT 119 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 +N+++E V Q + K + L++ Sbjct: 120 RNSVEERVTQVAKRKMMLTHLVV 142 >gi|322710278|gb|EFZ01853.1| putative DNA repair protein RAD26 [Metarhizium anisopliae ARSEF 23] Length = 1085 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 24/170 (14%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK------- 86 Q+ N + + K+ + N ++V H L LQ Sbjct: 541 QITN-------LVNPEFCGKWKVMKKLLRFWHQNGDKVLVFSHSVRLLRILQHLFTSTSY 593 Query: 87 ---AFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ + +N + + G GLN+ N +V W+ Sbjct: 594 NVSYLDGSLSYEERQDVVDTFNSDPAQFVFLISTKAGGVGLNITS-ANKVVIVDPHWNPS 652 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R V V+ LI+Q T++E+V R K + Sbjct: 653 -----YDLQAQDRAYRIGQTRDVEVFRLISQGTVEEIVYARQVYKQQQAN 697 >gi|7508346|pir||T28968 hypothetical protein T23H2.3 - Caenorhabditis elegans Length = 1026 Score = 82.1 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 64/174 (36%), Gaps = 28/174 (16%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCT 100 K+ ++ + +++ + S L ++K G Sbjct: 839 SCKMAKTLEVVREILEKKEKVVIVSQWTSVLNLVEKHIQAGGHNYTSITGQVLVKDRQER 898 Query: 101 IQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N +G ++ + G GLNL GGN L+ L W+ QQ +RI + Sbjct: 899 VDSFNQEKGGAQVMLLSLTAGGVGLNL-IGGNHLIMVDLHWNPALEQQACDRI-----YR 952 Query: 159 AGFKRAVFVYYL--------IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G K+ VF++ L I + TI++ V+ K + +L ++ Sbjct: 953 MGQKKEVFIHRLNISKFCRLIVKGTIEQRVMDLQEKKLALAASVLEGTATRKLN 1006 >gi|321457359|gb|EFX68447.1| hypothetical protein DAPPUDRAFT_260126 [Daphnia pulex] Length = 462 Score = 82.1 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 69/217 (31%), Gaps = 37/217 (17%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-----------------------YD 43 +R L + ++ Q+ + Y Sbjct: 228 MKR---LQLLDPKVTQQAILVMILRLRQVCSHPALVLTMFEDADSEFTGFDAESWSDTYF 284 Query: 44 EEKHWKEVHDEKIKALEVIIEKANAA-----PIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 +++ ++ L+ I+++ I++ + + L + + Sbjct: 285 HKQNPVFRREKMSTKLKYILDEVQGILSVKEKIVIVSQWTAMLDLIAIQLDNLSIAYQVI 344 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 N+ +L + G GLNL GGN L W+ + E R + Sbjct: 345 NGNISANKRTDIILLLSLLAGGTGLNL-IGGNHLFLVDPHWNPQL-----EAQATNRIFR 398 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G ++V V+ ++ Q++I+E VL K D ++ Sbjct: 399 IGQTKSVSVHRIVIQDSIEEKVLALQLNKIATADTII 435 >gi|189240994|ref|XP_968321.2| PREDICTED: similar to steroid receptor-interacting snf2 domain protein [Tribolium castaneum] Length = 1784 Score = 82.1 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 7/118 (5%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + I E+N KI + + G+NL G N +V W+ Sbjct: 1103 YYRLDGSTSALEREKLINEFNSNPKIHVFLVSTRAGSLGINL-IGANRVVVLDASWNP-- 1159 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G ++ FVY L+ N +++ + R K + D +++ + Sbjct: 1160 ---CHDTQAVCRVYRYGQRKPCFVYRLVVDNCLEKKIYDRQINKQGMSDRVVDECNPD 1214 >gi|168060035|ref|XP_001782004.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162666495|gb|EDQ53147.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1445 Score = 82.1 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 27/224 (12%), Positives = 70/224 (31%), Gaps = 36/224 (16%) Query: 2 KQYHKFQRELYCDLQGEN-IEAFNSASKTVKCLQLANGAVYY---------------DEE 45 + Y + DL + + + V+ + N + + + Sbjct: 663 QYYKWILERNFNDLNKGVRVNQVSLLNIVVELKKCCNHPFLFESADYGYGGDANTNDNNK 722 Query: 46 KHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 + K+ L+ ++ K +++ L L + Sbjct: 723 IQRIVLSSGKLAILDKLLVRLKETKHRVLIFSQMVKMLDILADYLSLRGFQFQRLDGSTR 782 Query: 98 ----PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +N + G G+NL + ++ F W+ + + Sbjct: 783 ADLRHQAMEHFNAPGSEDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQ 836 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++R + G + V +Y + +++E +L+R + K L+L Sbjct: 837 AMSRAHRIGQRDVVNIYRFVISRSVEEDILERAKKKMASSKLIL 880 >gi|259489604|tpe|CBF90013.1| TPA: ATPase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 648 Score = 82.1 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 67/201 (33%), Gaps = 31/201 (15%) Query: 29 TVKCLQLANGAVYYDE-------EKHWKEVHDEKIKALEVIIEKANA---APIIVAYHFN 78 ++ + + + K L+ +I + +I+ F+ Sbjct: 299 LMELRKCSIHPYLLADALPKEYNIGQHIVDASCKFIVLQKMIRQYVGLENKKVIIFSGFD 358 Query: 79 SDLARLQKAFPQGRTLD---------------KDPCTIQEWNEGKIPLLFAHPASCGHGL 123 L + + ++ N+ + + + G GL Sbjct: 359 QTLDLCEDLLEMEKAQFSFKYGRLDGSTSSAWRNLSVFLFQNDPRYMVFLLSTRAGGEGL 418 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL +I++F W+ + + R +R + G + V ++ + A+ T+++ + +R Sbjct: 419 NLVS-SSIVIFLDDDWNPQ-----VMRQAESRVHRIGQTQPVQIFRIHAKGTVEDQMRRR 472 Query: 184 LRTKSTIQDLLLNALKKETIH 204 + K+ + D ++ H Sbjct: 473 MDKKAYLADKVMGEFGNNITH 493 >gi|66356890|ref|XP_625623.1| Swi2/Snf2 ATpase,Rad16 ortholog [Cryptosporidium parvum Iowa II] gi|46226722|gb|EAK87701.1| Swi2/Snf2 ATpase,Rad16 ortholog [Cryptosporidium parvum Iowa II] Length = 1278 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 21/173 (12%) Query: 40 VYYDEEKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQK--------- 86 + K KI L ++++ + IV F + L + Sbjct: 1093 FITRQIKTQGFESSTKIDTLLEEVNKMMQEDPESKGIVFSQFTNMLDLVSYRLKKANIGC 1152 Query: 87 -AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ + + +N+ + ++ + G GLNLQ N + WW+ Sbjct: 1153 VMLAGSMSILQRNSILYSFNKFPDLKIILISLKAGGEGLNLQ-VANYVFLLDPWWNPA-- 1209 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E R + G K+ V I ++TI+E + Q K + D + A Sbjct: 1210 ---VELQAFQRAHRIGQKKKVTALRFITKDTIEERMFQLQEKKQLVFDGTVGA 1259 >gi|301122241|ref|XP_002908847.1| DNA repair and recombination protein RAD54 [Phytophthora infestans T30-4] gi|262099609|gb|EEY57661.1| DNA repair and recombination protein RAD54 [Phytophthora infestans T30-4] Length = 1076 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 77/260 (29%), Gaps = 65/260 (25%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------------- 45 K Y+ F C + N S +L N + +E Sbjct: 455 KLYNHFLSSSACR-DMMKRSSANVLSSITALKKLCNHPLLIFDEMGKTNTKLPGFSNCAQ 513 Query: 46 -------------------------KHWKEVHDEKIKALEVIIEKANA---APIIVAYHF 77 + K+ L+ ++ I++ ++ Sbjct: 514 YFTAAKSSKEGGGGDSRHRRGGFGGRTCYPEWSGKMLLLDRLMFSMRKTTTDRIVIVSNY 573 Query: 78 NSDL----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNL 125 L + K + +NE L + G GLNL Sbjct: 574 TQTLDVVSTLCQERHLPFVRLDGTTSAKKRKKLVDTFNEPTTNSFALLLSSKAGGCGLNL 633 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 G N LV F W+ ++ R + G K+ +VY +A T++E + QR Sbjct: 634 -IGANRLVLFDPDWNPAT-----DKQAAARVWREGQKKMCYVYRFLATGTLEEKIFQRQL 687 Query: 186 TKSTIQDLLLNALKKETIHV 205 +K +Q+++ K+E + Sbjct: 688 SKEGLQNIV--DDKEEVNSL 705 >gi|242078375|ref|XP_002443956.1| hypothetical protein SORBIDRAFT_07g005035 [Sorghum bicolor] gi|241940306|gb|EES13451.1| hypothetical protein SORBIDRAFT_07g005035 [Sorghum bicolor] Length = 166 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 51/142 (35%), Gaps = 17/142 (11%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPA 117 IV + L L+ + + ++++N + ++ ++ Sbjct: 12 CETIVFSQWTGMLDLLENSLNTNLIQYRRLDGTMSLNLRDKAVKDFNTDPEVRVMIMSLK 71 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLN+ + ++ LWW+ E + R + G R V V L ++T++ Sbjct: 72 AGNLGLNMVAACH-VILLDLWWNP-----YAEDQAIDRAHRIGQTRPVTVSRLTVKDTVE 125 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 + +L K + + K Sbjct: 126 DRILALQEEKRAMVNSAFGEDK 147 >gi|167534499|ref|XP_001748925.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772605|gb|EDQ86255.1| predicted protein [Monosiga brevicollis MX1] Length = 524 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 29/236 (12%), Positives = 78/236 (33%), Gaps = 49/236 (20%) Query: 5 HKFQRELYCDLQGENIEAFNS-ASKTVK------------CLQLANGAVYYDEEKHW--- 48 + ++++ L + S + ++ N + E + Sbjct: 101 RRLKKDVETQLPDKVEHILKVEMSALQRQLYKQMHNTIVQLRKICNHPFLFQEVEQDFST 160 Query: 49 ---------KEVHDEKIKALEVIIEKA------NAAPIIVAYHFNSDLARLQKAFP---- 89 ++V ++ ++ + +++ S + L+ FP Sbjct: 161 HVHQKPIAIQDVDLWRVAGKFELLTRMLPKLKATGHRVLIFCQMTSLITILEDFFPLIQI 220 Query: 90 ------QGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 D+ +Q++N + + + G GLNLQ + ++ F W+ Sbjct: 221 RSMRLDGATKADERASLLQQFNAADSDYDVFVLSTRAGGLGLNLQT-ADTVIIFDSDWNP 279 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G + V V+ + ++++E +L+ R K + ++ A Sbjct: 280 HQ-----DLQAQDRAHRIGQQNEVRVFRFVTVHSVEESILEAARFKLDVDQKVIQA 330 >gi|198452987|ref|XP_001359022.2| GA10321 [Drosophila pseudoobscura pseudoobscura] gi|198132165|gb|EAL28165.2| GA10321 [Drosophila pseudoobscura pseudoobscura] Length = 936 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 76/200 (38%), Gaps = 18/200 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV--- 61 + ++E + + + +K L + N + ++ +K++++ Sbjct: 724 EETKKENI----KKGKNVLSDLTGAMKLLDINNPIFNTSQPSTKLKIVIQKLQSILEGTT 779 Query: 62 ---IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHP 116 I+ + + + + ++ F + ++++N + +L Sbjct: 780 DKVIVVSQWTSFLDIIREYLNEHDWQTLDFNGKMDATEREVVLKDFNVVQNSKRILLLSL 839 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 S G GLNL N L+ L W+ + ER R + G ++ F+Y + Q+T+ Sbjct: 840 TSGGVGLNL-NVANHLLLVDLHWNPQL-----ERQAQDRIYRYGQQKPTFIYRFMCQDTV 893 Query: 177 DELVLQRLRTKSTIQDLLLN 196 ++ + K I +++L Sbjct: 894 EQRIKALQDYKLEIANVVLQ 913 >gi|187469489|gb|AAI66868.1| Smarca5 protein [Rattus norvegicus] Length = 584 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 66/176 (37%), Gaps = 22/176 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR--- 92 G Y + + K+ L+ ++ K + +++ L L+ Sbjct: 1 GPPYTTDM--HLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEY 58 Query: 93 -------TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 D+ +I +NE + + G G+NL ++++ + W+ + Sbjct: 59 CRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQ- 116 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G + V V+ I NT++E +++R K + +++ + Sbjct: 117 ----VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 168 >gi|126330702|ref|XP_001365797.1| PREDICTED: similar to helicase SMARCAD1 [Monodelphis domestica] Length = 1030 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 69/190 (36%), Gaps = 21/190 (11%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAY 75 E++E + C Q A + + K K LE I+ + +++ Sbjct: 824 EDMEVMTDFELHLLCKQYA--HINDFMLDMDLILDSGKFKKLECILSELKEKGDRVVLFS 881 Query: 76 HFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 F L L+ + + I ++N + I + + G G+N Sbjct: 882 QFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDQFNTDMDIFIFLLSTKAGGLGIN 941 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L N+++ + + ++ R + G + V V LI+Q TI+E +L+ Sbjct: 942 LTS-ANVVILHDIDCNP-----YNDKQAEDRCHRVGQTKEVHVIKLISQGTIEESMLKIN 995 Query: 185 RTKSTIQDLL 194 + K ++ + Sbjct: 996 QQKLKLEQDM 1005 >gi|317037066|ref|XP_001398335.2| SNF2 family helicase [Aspergillus niger CBS 513.88] Length = 917 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 23/163 (14%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKD 97 KI+AL I+ +A ++ + S L ++ + ++ +D Sbjct: 742 PSSKIEALIKILTAKGQAQGTKTVIFSQWTSFLDLIEPHLFRHGIGFARIDGKMSSISRD 801 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + +L A + C GLNL N + WW IE V R Sbjct: 802 NSTLRFSTDPSCTVLLASLSVCSVGLNLVA-ANQAILCDSWWAPA-----IEDQAVDRVY 855 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V+ L+ +++I++ VL K + L A ++ Sbjct: 856 RLGQTRETTVWRLVMEDSIEDRVLAIQENKRKLM---LEAFRE 895 >gi|195122656|ref|XP_002005827.1| GI20681 [Drosophila mojavensis] gi|193910895|gb|EDW09762.1| GI20681 [Drosophila mojavensis] Length = 1457 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 43/123 (34%), Gaps = 7/123 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + + E+N I L + G+NL G N ++ F Sbjct: 799 MRNSSYFRLDGSTSSQERERLVNEFNANCNIKLFLISTRAGSLGINLT-GANRVIIFDAS 857 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ + V R + G + +VY ++ +++ + R K + D +++ Sbjct: 858 WNP-----CHDTQAVYRIYRYGQTKPCYVYRIVMDKCLEKKIYDRQIKKQGMSDRIVDEC 912 Query: 199 KKE 201 E Sbjct: 913 NPE 915 >gi|256070527|ref|XP_002571594.1| hypothetical protein [Schistosoma mansoni] gi|238656738|emb|CAZ27824.1| hypothetical conserved protein [Schistosoma mansoni] Length = 1266 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I +N+ L + G+NL G N +V F W+ V Sbjct: 1046 EREKLINNFNDPKNPAKLFLMSTRAGCLGVNL-IGANRVVVFDASWNPCHDC-----QAV 1099 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G + ++Y L++ NT+++ + R TK + D +++ L Sbjct: 1100 CRVYRYGQVKPCYIYRLVSDNTMEKKIYDRQVTKQGMSDRVVDELN 1145 >gi|154277776|ref|XP_001539721.1| hypothetical protein HCAG_05188 [Ajellomyces capsulatus NAm1] gi|150413306|gb|EDN08689.1| hypothetical protein HCAG_05188 [Ajellomyces capsulatus NAm1] Length = 1162 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 28/212 (13%), Positives = 67/212 (31%), Gaps = 39/212 (18%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +R+ L+ + + + ++ L V KI+ I+ Sbjct: 970 KAVERKSLPQLKKNASRSAEAKREYMRYL-------------TDNWVTSAKIEKTMEILR 1016 Query: 65 KANAA---------PIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEW 104 + IV F S L + + ++ ++ Sbjct: 1017 DIQSRIPEGDDKPEKTIVFSQFTSLLDLLQVPIEREGWGYCRYDGSMQPSHRNEAVLRFS 1076 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ + GLNL + ++ +W+ +Q I+R + G R Sbjct: 1077 DSQNHTIMLISLKAGNSGLNLVA-ASQVIILDPFWNPYLEEQAIDR-----AHRIGQMRP 1130 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V V+ ++ T+++ +L+ K + + L Sbjct: 1131 VMVHRILVHKTVEDRILELQDRKRALIEGALG 1162 Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 15/65 (23%), Gaps = 6/65 (9%) Query: 3 QYHKFQRELYC----DLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + + L I N ++ Q D+ KI Sbjct: 785 LYEGLESKTQIRFNRYLDEGTIGRNYSNILVLLLRLRQACCHPHLIDDLGVETNAATAKI 844 Query: 57 KALEV 61 +E Sbjct: 845 DLIEN 849 >gi|45184972|ref|NP_982690.1| AAR147Wp [Ashbya gossypii ATCC 10895] gi|44980593|gb|AAS50514.1| AAR147Wp [Ashbya gossypii ATCC 10895] Length = 1580 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 70/176 (39%), Gaps = 23/176 (13%) Query: 38 GAVYYDEEKHWKEVHDEK-----IKALEVIIEKANAAPIIVAYHFNSDLARLQKA----- 87 + YD + +++ +H K + ++ +++ + +IV F + LQ Sbjct: 1383 HKLKYDYQLNFENLHQSKKVQQCLGIIKTVLDNSTDEKLIVFSQFTTFFDILQFFIKKVL 1442 Query: 88 ------FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + I+ + E LL + GL L N ++ +W+ Sbjct: 1443 NVSYLRYDGTMNGNVRASVIERFYREKNERLLLISMKAGNSGLTLT-CANHVILVDPFWN 1501 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +E + R + +R V+++ L+ +NTI++ +++ K T+ + ++ Sbjct: 1502 P-----YVEEQAMDRCYRISQQREVYIHRLLLKNTIEDRIVELQNRKRTLVENAMD 1552 Score = 35.5 bits (80), Expect = 4.3, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 13/43 (30%), Gaps = 5/43 (11%) Query: 1 MKQYHKFQRELYCDL-----QGENIEAFNSASKTVKCLQLANG 38 ++ Y + E + + + N + ++ Q Sbjct: 1190 LEFYKSLEHETAIQARALLNERKASSSSNILTLLLRLRQACCH 1232 >gi|320168818|gb|EFW45717.1| Rad54b protein [Capsaspora owczarzaki ATCC 30864] Length = 988 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 65/245 (26%), Gaps = 57/245 (23%) Query: 1 MKQYHKFQREL-YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD------ 53 + Y K + + A ++ N E E Sbjct: 579 LAIYRKVLQSAPLRSCFDSSSRASQHLVAITSLKKICNSPALIHELAKNAEKDSLFANTI 638 Query: 54 -----------------------------EKIKALEVIIEKANAA---PIIVAYHFNSDL 81 K+ AL I+ +++ ++ L Sbjct: 639 DLFPDDFSPDTFDAAHSGKQRIFWMWALRCKMAALAQILCTIKRDTTDRVVIVSNYTQTL 698 Query: 82 ARLQKAF----------PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGG 129 L+K K ++ +N + + G GLNL G Sbjct: 699 DHLEKLCAAYEFSFARLDGSTPTAKRQPIVEAFNSKYSTDYVFLLSSKAGGVGLNL-VGA 757 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 L+ W+ + + R + G R V +Y ++ +IDE + QR +K Sbjct: 758 CRLILVDTDWNPAN-----DLQAMARVWRDGQTRTVHLYRMLLTGSIDEKIYQRQLSKQG 812 Query: 190 IQDLL 194 + + Sbjct: 813 LSVAV 817 >gi|150864667|ref|XP_001383600.2| helicase of the Snf2/Rad54 family [Scheffersomyces stipitis CBS 6054] gi|149385923|gb|ABN65571.2| helicase of the Snf2/Rad54 family [Scheffersomyces stipitis CBS 6054] Length = 1093 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 65/170 (38%), Gaps = 17/170 (10%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----- 90 +E+ +++ +I + +++ F L L++ Q Sbjct: 906 TMSPYKLNEDAFLNSGKVLELQKTLKLIIEGRQEKVLIFSLFTQVLDILERVLTQFKYKF 965 Query: 91 -----GRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +++ I E+ + + IP+ + G G+NL N ++ F ++ + Sbjct: 966 VRLDGATSVESRQDIIDEFYDDETIPIFLLSTKAGGFGINL-IAANNVIIFDQSFNPHD- 1023 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G K+ V VY LI +T++E +L+ K + + Sbjct: 1024 ----DKQAEDRCHRVGQKKEVTVYKLIVNDTVEENMLKLAENKLQLDQTI 1069 >gi|118383249|ref|XP_001024779.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89306546|gb|EAS04534.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1046 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 71/233 (30%), Gaps = 47/233 (20%) Query: 3 QYHKFQRELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y K + ++ + +L N + + + K + Sbjct: 580 LYKKMIQ---ARYNKSELDTGEGAFGLLTIMRKLLNHPQLIYTDVGNQTSQEFKQYFPQD 636 Query: 62 I-------------------------IEKANAAPIIVAYHFNSDLARLQKAFPQ------ 90 I + + II+ ++ L LQ Q Sbjct: 637 YQLDDWEASFKFKFISDLLDQMRQIEIAQKSTERIIIVSYWTQTLDVLQIMIKQKNLKFV 696 Query: 91 ----GRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 K I + + I + ++ G GLNL N +V W+ Sbjct: 697 RLDGSVNAQKRQELIDRFQDPTNDIKVFLLCGSAGGTGLNL-SAANRMVLMEANWNPSND 755 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q++ RI + G + V +Y L+A T++E VLQR K + +++ Sbjct: 756 LQVMGRIW-----RDGQTKPVHIYRLVACGTMEEKVLQRQFLKEDLSQNVVDE 803 >gi|224116170|ref|XP_002317230.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222860295|gb|EEE97842.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 800 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 59/174 (33%), Gaps = 19/174 (10%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 N A Y V D K I KA IV + L L+ + Sbjct: 616 NVACYDTSSGSRDSVKDGMDKRCLPI--KAVGEKAIVFSQWTGMLDLLEACLKNSSIQYR 673 Query: 97 D----------PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++++N ++ ++ + GLN+ + ++ LWW+ Sbjct: 674 RLDGTMSVTARDKAVKDFNTLPEVSVMIMSLKAASLGLNMVAACH-VLLLDLWWNPTT-- 730 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E + R + G RAV V L +NT+++ +L + K + + Sbjct: 731 ---EDQAIDRAHRIGQTRAVTVLRLTVKNTVEDRILALQQKKREMVASAFGEDE 781 >gi|209945994|gb|ACI97228.1| okra [Drosophila melanogaster] Length = 167 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIER 150 ++ K + +N+ + +S G L G N L F W+ + Sbjct: 75 MSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DE 129 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + R + G K+ ++Y L+A +I+E +LQR K Sbjct: 130 QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKK 167 >gi|158289757|ref|XP_311416.4| AGAP010699-PA [Anopheles gambiae str. PEST] gi|157018480|gb|EAA07021.4| AGAP010699-PA [Anopheles gambiae str. PEST] Length = 596 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 27/211 (12%), Positives = 72/211 (34%), Gaps = 28/211 (13%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK--------HWKEVHDEKIKA 58 RE+ + + AS+ ++ + K+ Sbjct: 351 LHREVKLIMGSGETKEMRIASRLPHMRKVIQHPYLIPGAENLNTNLVTDEIVQFSSKMIV 410 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNE 106 L+ ++ + A + +++ F + L + + + E+N Sbjct: 411 LDKLLARLRARGSKVLIFSQFVTVLYLLMDYLDWREYEYCMLEGHTDIAERQEQMNEFNR 470 Query: 107 GKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G G+NL + ++F+ + ++ + ++ R + G +R Sbjct: 471 PDSTKFVFLLSTRAGGLGINLPA-ADTVIFYDMDFNPQ-----MDFQAEDRAHRIGQQRK 524 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V+ L+ + +IDEL+ K + + ++ Sbjct: 525 VHVFRLLVRGSIDELLYLHSERKRQLDEAVI 555 >gi|115442660|ref|XP_001218137.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188006|gb|EAU29706.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1063 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + K+ + AN ++V H L LQ F Sbjct: 666 NYANPDFCGKWKVLRRLLKWWHANGDKVLVFSHSVRLLKMLQMLFHHTSYNVSYLDGSMN 725 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D + E+N + + + S G GLN+ N +V W+ + Sbjct: 726 YDDRAKAVNEFNADPRQFVFLISTRSGGVGLNITS-ANKVVVMDPNWNPS-----YDLQA 779 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ LI+ T++E+V R K + Sbjct: 780 QDRAYRIGQSRDVEVFRLISAGTVEEIVYARQIYKQQQAN 819 >gi|299469770|emb|CBN76624.1| Essential abundant protein involved in regulation of transcription [Ectocarpus siliculosus] Length = 2331 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 7/118 (5%) Query: 84 LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + + ++ + + +L GLNL +++VF W+ + Sbjct: 2157 KYLRMDGSVSQAERAAAVDRFSADPSVAILLLTTRVGHLGLNL-SAASMVVFLEHDWNPQ 2215 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 ++ + R + G ++AV VY LIA +++++ VL+ K + +++ Sbjct: 2216 -----VDLQAMDRAHRLGQRKAVNVYRLIAADSVEQRVLRLQGHKLQVAAAVVSRENA 2268 >gi|290994819|ref|XP_002680029.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin [Naegleria gruberi] gi|284093648|gb|EFC47285.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin [Naegleria gruberi] Length = 1283 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 73/223 (32%), Gaps = 32/223 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------------ 50 Y Q + L G+ + + + ++ ++ N + +E + Sbjct: 740 LYQNIQDKNKIVLNGKKLRNTSLNNTVMQLRKVCNHPYLFFKETEYLNNLSDETYYDWMC 799 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 K + L I K +++ L ++ Sbjct: 800 RSSGKFELLSRIFPKLKRTGHRVLLFSQMTQILDIFEEFLSHLGYEYLRLDGAVNAADRG 859 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +++WN P + S G GLNLQ + ++ F W+ ++ + + R Sbjct: 860 TLVKQWNAKDSPYFVFLLSTRSGGLGLNLQT-ADTVIMFDSDWNPQQ-----DLQAMARA 913 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G ++V V + ++E V R + K + ++ A K Sbjct: 914 HRIGQTKSVLVLTFCTRTPVEEKVRDRAQEKRDAEAKVIKAGK 956 >gi|312217656|emb|CBX97603.1| similar to helicase swr1 [Leptosphaeria maculans] Length = 1692 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 68/183 (37%), Gaps = 25/183 (13%) Query: 22 AFNSASKTVKCLQLANGAVY-------YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 + A + LQ G + E + + ++ + I+E+ Sbjct: 1366 RQSIAFPDKRLLQYDCGKLQRLATLLRDLEAGGHRALIFTQMTKVLDILEQ--------- 1416 Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 F + +++ +N + KI S G G+NL G + ++ Sbjct: 1417 --FLNIHGHRYLRLDGSTKIEQRQILTDRFNSDPKILAFILSSRSGGLGINLT-GADTVI 1473 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F+ L W+ +++ R + G R V +Y +++ TI+ +L++ K + D+ Sbjct: 1474 FYDLDWNPA-----MDKQCQDRAHRIGQTRDVHIYKFVSEYTIEANILRKSNQKRLLDDV 1528 Query: 194 LLN 196 ++ Sbjct: 1529 IIQ 1531 >gi|302677518|ref|XP_003028442.1| hypothetical protein SCHCODRAFT_17379 [Schizophyllum commune H4-8] gi|300102130|gb|EFI93539.1| hypothetical protein SCHCODRAFT_17379 [Schizophyllum commune H4-8] Length = 939 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 19/166 (11%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPC 99 K+ L ++ A IV + S L + F + Sbjct: 737 PSTKMLKLLELLREWDATGDKTIVYSQWTSMLDLVDTVFSIHGISALRFDGRMDRQQRDA 796 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + G ++ GLNL N ++ L W+ E R + Sbjct: 797 VLAAFKRPGGPKVILISTKCGSVGLNLVS-ANRVINLDLSWNYAA-----ESQAYDRCHR 850 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G + V++ L+ ++TI+E +L+ K + + L +H Sbjct: 851 IGQDKPVWIKRLVVEDTIEERMLKLQDVKVGLAEAALGEGTGTRLH 896 >gi|115643723|ref|XP_001199493.1| PREDICTED: similar to Smarca4 protein, partial [Strongylocentrotus purpuratus] gi|115665532|ref|XP_001186937.1| PREDICTED: similar to Smarca4 protein, partial [Strongylocentrotus purpuratus] Length = 642 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 36/199 (18%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH----------------DEKIKALEVIIEKAN--AAP 70 ++ ++ N + + H K + L+ I+ K Sbjct: 12 IMQLRKICNHPFMFRHIEESFSEHLGVTGGIISGPDLYRVGGKFELLDRILPKLKALGHR 71 Query: 71 IIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLF--AHPAS 118 I++ + + L+ F D +Q +NE P + Sbjct: 72 ILLFCQMTTLMTILEDFFVYRGFKYLRLDGTTKADDRGILLQTFNEANCPYFIFMLSTRA 131 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNLQ + ++ F W+ + + R + G V V L+ +++E Sbjct: 132 GGLGLNLQT-ADTVILFDSDWNPHQ-----DLQAQDRAHRIGQVNEVRVLRLMTVQSVEE 185 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L R K + ++ A Sbjct: 186 KILAAARWKMNMDSKIIQA 204 >gi|297734859|emb|CBI17093.3| unnamed protein product [Vitis vinifera] Length = 1025 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 17/167 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT------ 93 D EK+W E LE+ + + I+ + + L LQ + Sbjct: 847 FQIDVEKNWMESSKVAALLLELENLCSVGSKSILFSQWTAFLDLLQIPLSRSNISFVRLD 906 Query: 94 ----LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I+++ E I +L + G G+NL + WW+ +Q + Sbjct: 907 GTLNQQQREKVIKQFSEESNILVLLMSLKAGGVGINLTA-ASNAFVLDPWWNPAVEEQAV 965 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI + G + V + I + T++E +L K + L Sbjct: 966 MRI-----HRIGQTKRVMIKRFIVKGTVEERMLAVQARKQRMISGAL 1007 >gi|301107330|ref|XP_002902747.1| DNA repair protein RAD5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative [Phytophthora infestans T30-4] gi|262097865|gb|EEY55917.1| DNA repair protein RAD5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative [Phytophthora infestans T30-4] Length = 1036 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 62/157 (39%), Gaps = 23/157 (14%) Query: 66 ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFA 114 ++V + S L +F G + + ++ + + +L Sbjct: 878 DQKRKVVVFSQWTSMLGMVSQLLTRHGFSHCSFNGGLNQEARERVLTKFAKDPDVEVLVI 937 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL ++++ WW+ +Q ++R+ + G + V V + N Sbjct: 938 SLKAGGVGLNLT-CASVVILLDPWWNPGVEEQAVDRV-----HRLGQTQDVIVKRYVVNN 991 Query: 175 TIDELVLQRLRTKSTIQDLLL------NALKKETIHV 205 T+++++LQ + K + +L + + E +++ Sbjct: 992 TVEDMILQLQQRKEKLAKHVLVVAKAHDERRSERLNL 1028 >gi|169602773|ref|XP_001794808.1| hypothetical protein SNOG_04389 [Phaeosphaeria nodorum SN15] gi|160706250|gb|EAT88149.2| hypothetical protein SNOG_04389 [Phaeosphaeria nodorum SN15] Length = 1065 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 72/204 (35%), Gaps = 22/204 (10%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGA---VYYDEEKHWKEVHDEKIKALEVII 63 + E + I + +C QLA + E ++ + + K+ AL ++ Sbjct: 800 IKEEYFAASDPATIFEELQLYQDYQCHQLALKWPKTLKKFELQNHEWMDSGKVTALFALL 859 Query: 64 EKA--NAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPCTIQEWN-EGKIP 110 ++ N +V F S + A + + + + + I Sbjct: 860 KQYKANGDRALVFSQFTSVMDILSWVFDEHAIDFMRMDGSTPIAERQSLMDAFYADESIG 919 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + S G G+NL N +V F ++ ++ + R + G R V V L Sbjct: 920 VFMISTKSGGAGINL-ACANKVVIFDSSFNPQD-----DVQAENRAHRVGQTREVEVVRL 973 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 + + T++E + +K + ++ Sbjct: 974 VTRGTVEEQIYALGVSKLELDKMV 997 >gi|19112177|ref|NP_595385.1| SHREC complex subunit Mit1 [Schizosaccharomyces pombe 972h-] gi|74625356|sp|Q9P793|MIT1_SCHPO RecName: Full=Chromatin remodeling factor mit1; AltName: Full=Mi2-like interacting with clr3 protein 1; AltName: Full=Snf2/Hdac-containing repressor complex protein mit1; Short=SHREC protein mit1 gi|7573203|emb|CAB87372.1| SHREC complex subunit Mit1 [Schizosaccharomyces pombe] Length = 1418 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 66/197 (33%), Gaps = 31/197 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEK--ANAAPIIVAY 75 ++ + Y + + + K L +++ K I++ Sbjct: 835 LMQLRKTLAHPYIYSPDIEDRNLPYELAMRSLEEASCKFLILRLLVPKLITRGHRILLFS 894 Query: 76 HFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGL 123 F L L+ F + + I +N + G G+ Sbjct: 895 QFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLSTRAGGVGI 954 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + + R + G K+ V V+ L +++++E ++Q Sbjct: 955 NL-ASADTVIILDPDFNPHQDM-----QAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQN 1008 Query: 184 LRTKSTIQDLLLNALKK 200 + K + L++ +L + Sbjct: 1009 AQKKLVLDHLIVESLDQ 1025 >gi|156049585|ref|XP_001590759.1| hypothetical protein SS1G_08499 [Sclerotinia sclerotiorum 1980] gi|154692898|gb|EDN92636.1| hypothetical protein SS1G_08499 [Sclerotinia sclerotiorum 1980 UF-70] Length = 915 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 66/196 (33%), Gaps = 19/196 (9%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 R + E I +SKT +Q+ V +++ + + + II+K Sbjct: 722 LVRPAVEKAEAEEINTDEKSSKTEALMQIIK--VTHNDPLSKVVIFSQ-WTSFLNIIQKQ 778 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 I +D ++ + +L A A C GLNL Sbjct: 779 LEQSGIKFAR----------IDGSMTAPQRDKGMQSLESDPECRVLLASLAVCSVGLNLV 828 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + ++ WW IE V R + G KR V+ L+ + +I+E VL+ Sbjct: 829 S-ADTVILADSWWAPA-----IEDQAVDRVYRLGQKRDCKVWRLVMEGSIEERVLEIQGE 882 Query: 187 KSTIQDLLLNALKKET 202 K + +E Sbjct: 883 KRKLAGKAFQEKAREG 898 Score = 36.3 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 5/55 (9%), Positives = 14/55 (25%), Gaps = 10/55 (18%) Query: 1 MKQYHKFQREL--YCDL--------QGENIEAFNSASKTVKCLQLANGAVYYDEE 45 +K Y ++ + I + ++ Q+ N + Sbjct: 583 LKVYEALVKQAQGMAQQYQKESESRKKNTISYTHILEILLRMRQVCNHWKLCENR 637 >gi|255576850|ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 1051 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 59/154 (38%), Gaps = 17/154 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQ 102 + ++ LE I I+ + S L L+ F + T++ Sbjct: 886 SKLLECLERIRRSDCGEKSIIFSQWTSFLDLLEIPLRRRAIGFLRFDGKLVQKQRERTLK 945 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+NE K +L + G GLNL + + WW+ +Q I RI + G Sbjct: 946 EFNETKEKMVLLMSLKAGGVGLNLTA-ASNVFLMDPWWNPAVEEQAIMRI-----HRIGQ 999 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 KR V V I ++T++E + Q K + L Sbjct: 1000 KRTVTVRRFIVKDTLEERMQQVQARKQRMIAGAL 1033 >gi|291526268|emb|CBK91855.1| Superfamily II DNA/RNA helicases, SNF2 family [Eubacterium rectale DSM 17629] Length = 559 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 26/208 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + + D++ + + N + T++ QL +G K+ ++ Sbjct: 349 KQYRDIKNGIVADMEN-ILASVNPLNCTLRLRQLTSG-------NPNLTDDSPKLDRIKE 400 Query: 62 IIEK---ANAAPIIVAYHFNS-------DLARLQKAFPQGRTLDK-DPCTIQEWN-EGKI 109 ++E+ N I+ +++ +L+ G + + + Sbjct: 401 MLEEEIIPNGHKAIIFSQWSTIAKDLGIELSEYDPIVITGEVHPEQRQKLVDNFQTNPHC 460 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GL L + + F W+ ++ R + G AV V Sbjct: 461 KVAIGTIGAMGTGLTL-NKASYVFFMDKAWNSGDN-----AQAEDRAHRIGTVGAVNVIS 514 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++A+ TIDE V L + D +++ Sbjct: 515 MVAKGTIDEAVEDYLLENKDLIDRVVDG 542 >gi|331238525|ref|XP_003331917.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309310907|gb|EFP87498.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1036 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 17/151 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKI 109 + + + IV F L +++ ++ N + Sbjct: 876 KLNQSDHTIKSIVFSQFTVFLDLIERRLQLAGFKLARLQGNMTPEARNRTIQYFMNNNDV 935 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q ++RI + G R V V Sbjct: 936 QVFLVSLKAGGVALNLTE-ASRVFIMDPWWNPAVELQAMDRI-----HRLGQHRPVVVTR 989 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LI +N+I+ +++ + K + L + Sbjct: 990 LIIENSIESRIVELQKKKEAMTGAALGDDDQ 1020 >gi|238909201|ref|YP_002939668.1| non-specific serine/threonine protein kinase [Eubacterium eligens ATCC 27750] gi|238873438|gb|ACR73147.1| non-specific serine/threonine protein kinase [Eubacterium eligens ATCC 27750] Length = 559 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 26/208 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY + + D++ + + N + T++ QL +G K+ ++ Sbjct: 349 KQYRDIKNGIVADMEN-ILASVNPLNCTLRLRQLTSG-------NPNLTDDSPKLDRIKE 400 Query: 62 IIEK---ANAAPIIVAYHF--------NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKI 109 ++E+ N I+ + ++ + + Sbjct: 401 MLEEEIIPNGHKAIIFSQWSTIAKDLGIELSEYDPIVITGEVPPEQRQRLVDNFQTNPHC 460 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GL L + + F W+ ++ R + G AV V Sbjct: 461 KVAIGTIGAMGTGLTL-NKASYVFFMDKAWNSGDN-----AQAEDRAHRIGTVGAVNVIS 514 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++A+ TIDE V L + D +++ Sbjct: 515 MVAKGTIDEAVEDYLLENKDLIDRVVDG 542 >gi|290988418|ref|XP_002676918.1| predicted protein [Naegleria gruberi] gi|284090523|gb|EFC44174.1| predicted protein [Naegleria gruberi] Length = 1056 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 23/225 (10%), Positives = 63/225 (28%), Gaps = 33/225 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----------- 51 Y + + + N + + Sbjct: 460 VYRAIVERKVNFFRKQFASKQDLTYIVNSLRYCCNHPCLISGMEEYLRDEQKRDDKGILI 519 Query: 52 -HDEKIKALEVIIEKANA--APIIVAYHFNSDL----------ARLQKAFPQGRTLDKDP 98 K+ + +++K ++ F L ++ Sbjct: 520 YSSSKMVVVHKLLKKFRDANEKTLILSQFLEMLDVLESYLQSEQISYVRIDGSCPSEERQ 579 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++ + + + G+NL N ++ + ++ + R Sbjct: 580 RYIDKFQTDSECRVFLLSTKISQ-GINLTA-ANHVIIYDSDFNP-----FNDSQAAARAH 632 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL-NALKKE 201 + G + VFVY L+ +++ ++ ++ R K + L+L + K + Sbjct: 633 RIGQTKKVFVYRLVTKDSYEKYIISRASKKLGREKLVLAESDKSD 677 >gi|195498627|ref|XP_002096604.1| GE24955 [Drosophila yakuba] gi|194182705|gb|EDW96316.1| GE24955 [Drosophila yakuba] Length = 1055 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 22/164 (13%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKD 97 KI + I++ ++ IV + S L L++ + Sbjct: 882 PSSKINMVIQILKTSILNSSDDKAIVVSQWTSVLDILREHLSNDGVTTLSLNGTIPVKNR 941 Query: 98 PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N+ + +L + G GLNL G N L+ L W+ + E R Sbjct: 942 QDIVNQFNDRNNQKRVLLLSLTAGGVGLNL-IGANHLLLLDLHWNPQL-----EAQAQDR 995 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V +Y + +T+++ + K + D +L K Sbjct: 996 IYRVGQKKNVTIYKFMCVDTVEQRIKALQDKKLDLADGVLTGAK 1039 Score = 41.3 bits (95), Expect = 0.091, Method: Composition-based stats. Identities = 4/57 (7%), Positives = 17/57 (29%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ +++ + ++ Q+ D +E + + + Sbjct: 761 YKMHEKFARMAGSKREVKSHDILVLLLRLRQICCHPGLIDAMLDGEESQSLRDHSSD 817 >gi|312219184|emb|CBX99128.1| similar to SNF2 family helicase/ATPase PasG [Leptosphaeria maculans] Length = 907 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 67/222 (30%), Gaps = 41/222 (18%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------- 52 R ++ + + ++ N + E+ Sbjct: 595 RAATFEIAKRQLMQKKLGNPIMQLRLCCNSPYNFFNPFLKTEIEGSETFASEIEPDETLV 654 Query: 53 --DEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDP 98 K+ L+ ++ + +++ F + L Sbjct: 655 STSGKMLLLDTLLPELIKRGHKVLIFSQFTTTLDLLGQYLDLRSWKYARIDGSVAQSDRQ 714 Query: 99 CTIQEWNEGK-----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N+ + + G G+NL + ++ F W+ ++ + + Sbjct: 715 EQILAFNKPNKSKDATDIFILSTRAGGQGINL-AAADTVILFDSDWNPQQ-----DLQAM 768 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V VY +NT+++ +L+ K ++ L++ Sbjct: 769 DRAHRIGQTRNVIVYRFATRNTVEQKLLESAEGKRRLEKLVI 810 >gi|116235007|dbj|BAF34943.1| chromatin remodeling factor DDM1b [Oryza sativa Japonica Group] gi|116235011|dbj|BAF34945.1| chromatin remodeling factor DDM1b [Oryza sativa Japonica Group] gi|222625697|gb|EEE59829.1| hypothetical protein OsJ_12393 [Oryza sativa Japonica Group] Length = 849 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 21/196 (10%), Positives = 65/196 (33%), Gaps = 37/196 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA---------------APII 72 ++ + N + +E ++E+ ++ Sbjct: 574 LLIQLRKNCNHPDLLESAYD----SSGMYPPVEKLLEQCGKFQLLNRLLNLLLARKHKVL 629 Query: 73 VAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCG 120 + + L ++ L++ I E+N+ + + + G Sbjct: 630 IFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQIAEFNDLNSSMNIFILSTRAGG 689 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + + + W+ + ++ + R + G R V VY L ++++ + Sbjct: 690 LGINLTS-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTRPVHVYRLATSHSVEGRI 743 Query: 181 LQRLRTKSTIQDLLLN 196 +++ K ++ +++ Sbjct: 744 IKKAFGKLRLEHVVIG 759 >gi|212532483|ref|XP_002146398.1| DNA excision repair protein Rad16, putative [Penicillium marneffei ATCC 18224] gi|210071762|gb|EEA25851.1| DNA excision repair protein Rad16, putative [Penicillium marneffei ATCC 18224] Length = 951 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 51/155 (32%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I + + Sbjct: 789 KLRSKKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGSMTPTQRQNSIDHFMKNVDV 848 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 849 EVFLVSLKAGGVALNLTE-ASRVFIIDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 902 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + +N + + + Sbjct: 903 LCIEDSVESRMVALQEKKANMINGTINKDQGDALE 937 >gi|289618348|emb|CBI55072.1| unnamed protein product [Sordaria macrospora] Length = 972 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 17/163 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GR 92 E + D ++ ++ + K +I+ + S L +Q + Sbjct: 793 ESETKSSKTDAVLRLVKDSLGKDAGNKVIIFSQWTSFLTIIQHQLDEAGYTYTRIDGSMN 852 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T +D + +L A C GLNL N ++ WW IE Sbjct: 853 TAQRDAAIRALDYDPNTRILLASLGVCSVGLNLVS-ANTVILADSWWAPA-----IEDQA 906 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V R + G R VY L+ +NTI+E VL + K + Sbjct: 907 VDRVHRLGQTRETNVYRLVMENTIEERVLDIQKEKRELVGKAF 949 >gi|218193665|gb|EEC76092.1| hypothetical protein OsI_13335 [Oryza sativa Indica Group] Length = 850 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 21/196 (10%), Positives = 65/196 (33%), Gaps = 37/196 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA---------------APII 72 ++ + N + +E ++E+ ++ Sbjct: 575 LLIQLRKNCNHPDLLESAYD----SSGMYPPVEKLLEQCGKFQLLNRLLNLLLARKHKVL 630 Query: 73 VAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCG 120 + + L ++ L++ I E+N+ + + + G Sbjct: 631 IFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQIAEFNDLNSSMNIFILSTRAGG 690 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + + + W+ + ++ + R + G R V VY L ++++ + Sbjct: 691 LGINLTS-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTRPVHVYRLATSHSVEGRI 744 Query: 181 LQRLRTKSTIQDLLLN 196 +++ K ++ +++ Sbjct: 745 IKKAFGKLRLEHVVIG 760 >gi|212543509|ref|XP_002151909.1| DNA excision repair protein (Rad26L), putative [Penicillium marneffei ATCC 18224] gi|210066816|gb|EEA20909.1| DNA excision repair protein (Rad26L), putative [Penicillium marneffei ATCC 18224] Length = 1059 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + + K+ + AN ++V H L LQ F + Sbjct: 618 NYANPEFCGKWKVLRKLLKWWHANGDKVLVFSHSVRLLKMLQMLFNHTSYNVSYLDGAMS 677 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + E+N + + + + G GLN+ N +V W+ + Sbjct: 678 YEDRAKVVDEFNSDPQQFVFLISTRAGGVGLNIVS-ANKVVVVDPNWNPSH-----DLQA 731 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ LI+ TI+E+V R K + Sbjct: 732 QDRAYRIGQHRDVEVFRLISAGTIEEIVYARQIYKQQQAN 771 >gi|325181157|emb|CCA15572.1| CHROMODOMAIN HELICASE DNA BINDING putative [Albugo laibachii Nc14] Length = 1918 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 71/238 (29%), Gaps = 47/238 (19%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYD----------EEKHWK 49 + Y L G + + + ++ + N E++ Sbjct: 693 QYYRAIYERNVAFLIRGGRRADGPSLMNVMMELRKCCNHPFLIKGVEQREIERLEKQEGI 752 Query: 50 EVHDEKIKALEVII----------------EKANAAPIIVAYHFNSDLARLQKA------ 87 +H +K ++ + +++ F L LQ Sbjct: 753 PLH-QKEAQARELLVTSSGKLILLDKLLPLLEKGGHRVLIFSQFKIMLDILQDYLSLRGF 811 Query: 88 ----FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 T ++ I + + ++ + G G+NL + ++ + W+ Sbjct: 812 KFERIDGNITGNERQAAIDRYCGTSNQAFVMLISTRAGGVGINLTA-ADTVIIYDSDWNP 870 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + R + G ++V +Y L+ T + + + K + ++L ++ Sbjct: 871 QN-----DLQAQARCHRIGQTKSVKIYRLLTSKTYELQMFHQASIKLGLDQVVLGGMQ 923 >gi|302810562|ref|XP_002986972.1| hypothetical protein SELMODRAFT_40849 [Selaginella moellendorffii] gi|300145377|gb|EFJ12054.1| hypothetical protein SELMODRAFT_40849 [Selaginella moellendorffii] Length = 849 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 60/167 (35%), Gaps = 23/167 (13%) Query: 52 HDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 KI AL I++K + +V F+S L + Q G + K Sbjct: 675 SSAKITALLSILDKTRAKDPSIKTVVFSQFSSMLKLAEAPLTQAGYKFVKLQGGMSAKKR 734 Query: 98 PCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + + + G GLNL + +V WW+ E + Sbjct: 735 DEAMEAFKSTSKDSPTVFLLSLKAAGVGLNLVS-ASNVVMLDPWWNPAA-----EEQAMD 788 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R V V+ L+A ++I+E +LQ K + L E Sbjct: 789 RVHRLGQTRDVHVFRLVATDSIEERLLQMQEKKRAYAQIALGKEASE 835 >gi|317150332|ref|XP_001823954.2| DNA excision repair protein (Rad26L) [Aspergillus oryzae RIB40] Length = 970 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + + K+ + +N ++V H L LQ F + Sbjct: 648 NYANPEFCGKWKVLRRLLKWWHSNGDKVLVFSHSVRLLRMLQMLFHHTSYNVSYLDGSMS 707 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + E+N + + + + G GLN+ N +V W+ + Sbjct: 708 YEDRATAVDEFNSDPRQFVFLISTRAGGVGLNITS-ANKVVVVDPNWNPS-----YDLQA 761 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ LI+ TI+E+V R K + Sbjct: 762 QDRAYRIGQVRDVEVFRLISAGTIEEIVYARQIYKQQQAN 801 >gi|308472052|ref|XP_003098255.1| hypothetical protein CRE_08427 [Caenorhabditis remanei] gi|308269241|gb|EFP13194.1| hypothetical protein CRE_08427 [Caenorhabditis remanei] Length = 205 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCT 100 K+K I+ +++ + S L +++ Q Sbjct: 33 SCKMKKTLQILSNIVEKGEKVVIVSQWTSVLELIEEHIKQYAIRYTSITGQIPVKDRQER 92 Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N G ++ + G GLNL GGN L+ L W+ QQ +RI + Sbjct: 93 VDSFNREVGGAKVMLLSLTAGGVGLNLT-GGNHLIMIDLHWNPALEQQAFDRI-----YR 146 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G K+ VF++ LI + TI++ V++ ++K T+ +L+ ++ Sbjct: 147 MGQKKPVFIHRLITKGTIEQRVVELQKSKLTLASSVLDGTATRKMN 192 >gi|224049423|ref|XP_002191909.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 1108 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 65/176 (36%), Gaps = 19/176 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K +ALE I+ K +++ F L L+ + Sbjct: 921 HINDFMLDMDQILDSGKFRALERILSNLKEKGDRVVLFSQFTMMLDILEVLLKHWQHRYL 980 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL NI++ + + Sbjct: 981 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANIVILHDIDCNP---- 1035 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++ R + G R V V LI++ TI+E +L+ + K ++ + A E Sbjct: 1036 -YNDKQAEDRCHRVGQTREVQVIKLISKGTIEETMLKISQQKLKLEQDMTAAESGE 1090 >gi|238499559|ref|XP_002381014.1| DNA excision repair protein (Rad26L), putative [Aspergillus flavus NRRL3357] gi|220692767|gb|EED49113.1| DNA excision repair protein (Rad26L), putative [Aspergillus flavus NRRL3357] Length = 882 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + + K+ + +N ++V H L LQ F + Sbjct: 606 NYANPEFCGKWKVLRRLLKWWHSNGDKVLVFSHSVRLLRMLQMLFHHTSYNVSYLDGSMS 665 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + E+N + + + + G GLN+ N +V W+ + Sbjct: 666 YEDRATAVDEFNSDPRQFVFLISTRAGGVGLNITS-ANKVVVVDPNWNPS-----YDLQA 719 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ LI+ TI+E+V R K + Sbjct: 720 QDRAYRIGQVRDVEVFRLISAGTIEEIVYARQIYKQQQAN 759 >gi|71027005|ref|XP_763146.1| global transcription activator [Theileria parva strain Muguga] gi|68350099|gb|EAN30863.1| global transcription activator (SNF2L2), putative [Theileria parva] Length = 998 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 62/180 (34%), Gaps = 25/180 (13%) Query: 22 AFNSASKTVKCLQLANGAVY-----YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVA 74 ++ +K ++ ++ N + K+ L++I+ + +++ Sbjct: 649 TVHTQNKFLQLRKICNHPFLYINSNFIPCNDLIINSSGKMCILDMILSRLYYVNHRVLIF 708 Query: 75 YHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHG 122 S L L+ + +K I +NE + + G Sbjct: 709 SQMTSLLDILEVYLNYRGYKYLRLDGNLSSEKRLERINLFNEPDSQYFVFILSTKAGSLG 768 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NLQ + ++ + W+ + + +R + G K V LI NTI++ + + Sbjct: 769 INLQS-ADTVIIYDSDWNPQN-----DLQAQSRVHRIGQKNQVITLRLITPNTIEDNIYR 822 >gi|299754940|ref|XP_001828301.2| hypothetical protein CC1G_02882 [Coprinopsis cinerea okayama7#130] gi|298410995|gb|EAU93652.2| hypothetical protein CC1G_02882 [Coprinopsis cinerea okayama7#130] Length = 836 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 24/185 (12%) Query: 38 GAVYYDEEKHWKEVHD-----EKIKALEVII--EKANAAPIIVAYHFNSDLAR------- 83 +E ++ K + + ++ ++ F + L Sbjct: 643 HPPLDEELGKPGDIFSDGFLSSKFQVVLGLLRRHYRKNEKTLIFSSFVTVLDVLSECLDA 702 Query: 84 ----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + T + + + ++ S G GLN+ N +V WW Sbjct: 703 HGIGHVRYDGSMSTKARQEALDSIVQDDESMVMLVSIKSGGTGLNITS-CNNVVILDPWW 761 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +E ++R + G ++ V VY + A NT+++ + + K I D L + Sbjct: 762 NP-----YVEEQAISRAHRLGQEKEVNVYRITAPNTVEDKICKTQHRKFNIIDPLQDRCA 816 Query: 200 KETIH 204 TIH Sbjct: 817 ATTIH 821 >gi|134083904|emb|CAK48808.1| unnamed protein product [Aspergillus niger] Length = 875 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 23/163 (14%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKD 97 KI+AL I+ +A ++ + S L ++ + ++ +D Sbjct: 700 PSSKIEALIKILTAKGQAQGTKTVIFSQWTSFLDLIEPHLFRHGIGFARIDGKMSSISRD 759 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + +L A + C GLNL N + WW IE V R Sbjct: 760 NSTLRFSTDPSCTVLLASLSVCSVGLNLVA-ANQAILCDSWWAPA-----IEDQAVDRVY 813 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G R V+ L+ +++I++ VL K + L A ++ Sbjct: 814 RLGQTRETTVWRLVMEDSIEDRVLAIQENKRKLM---LEAFRE 853 >gi|39940416|ref|XP_359745.1| hypothetical protein MGG_05032 [Magnaporthe oryzae 70-15] gi|145010723|gb|EDJ95379.1| hypothetical protein MGG_05032 [Magnaporthe oryzae 70-15] Length = 1166 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN 105 I+ L + + A ++V F S L ++E+ Sbjct: 1002 IQHLRDLRRERPRAKVVVFSQFTSFLTLIEGSLDRANMHHVRLDGTMAQKTRVAVLEEFK 1061 Query: 106 EG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K + + G GLNL + + WW Q I+R+ + G Sbjct: 1062 ACSKFTVFLISLRAGGVGLNLTE-ASRVYMCDPWWSFSVESQAIDRV-----HRMGQSEE 1115 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDL--LLNALKKETIHV 205 V VY I +N+++E +L+ K I +++ +K + Sbjct: 1116 VKVYRFIVKNSVEERMLKIQDRKKFIATSLGMMSDDEKRLARI 1158 >gi|289577895|ref|YP_003476522.1| SNF2-related protein [Thermoanaerobacter italicus Ab9] gi|289527608|gb|ADD01960.1| SNF2-related protein [Thermoanaerobacter italicus Ab9] Length = 931 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 71/215 (33%), Gaps = 32/215 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----HDEKIK 57 K Y + + ++ + K ++L +E K++ Sbjct: 703 KLYCQLIEDY-----KNKGKSESPLGVLQKLMELCAHPRLVRDEGEVNTFQLLSESGKLQ 757 Query: 58 ALEVIIEKAN--AAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 L ++ + ++ H+ A L+ G I ++ Sbjct: 758 RLIELLNEIKRRGEKAVIFTHYIKMQAILRKVIMDVFGINCPVINGSIKGDRMNVIDKFK 817 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E ++ + G G+ + N ++ ++ W+ +E+ R + G R Sbjct: 818 ESSGFGVIILSTRAAGVGITITE-ANNVIHYTRDWNPA-----VEKQATDRVYRIGQTRE 871 Query: 165 VFVYYLIA----QNTIDELVLQRLRTKSTIQDLLL 195 V +YY I T++E + + L+ K + + ++ Sbjct: 872 VNIYYPICISSRGKTVEERLNEVLQKKLQLLNEVI 906 >gi|190344615|gb|EDK36323.2| hypothetical protein PGUG_00421 [Meyerozyma guilliermondii ATCC 6260] Length = 497 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 54/125 (43%), Gaps = 7/125 (5%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + +++ + +N + KIP+ S G G+NL G + ++F Sbjct: 254 QFLNIHGYRYMRLDGATKIEERQVLTETFNRDPKIPVFILSTRSGGLGINLT-GADTVIF 312 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ +++ R + G R V +Y +++ TI+ +L++ K + +++ Sbjct: 313 YDSDWNPA-----MDKQCQDRCHRIGQSRDVHIYRFVSEYTIESNILKKANQKRHLDNVV 367 Query: 195 LNALK 199 + + Sbjct: 368 IQEGE 372 >gi|149245206|ref|XP_001527137.1| hypothetical protein LELG_01966 [Lodderomyces elongisporus NRRL YB-4239] gi|146449531|gb|EDK43787.1| hypothetical protein LELG_01966 [Lodderomyces elongisporus NRRL YB-4239] Length = 357 Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 8/121 (6%) Query: 78 NSDLARLQKAFPQGRTLDK-DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 L + G T + ++++ + I +L G L G + ++F Sbjct: 146 KKYLPSVTYMRLDGSTDPRHRQSIVRKFDEDPSIDVLLLTTKVGGLAEYLT-GADTVIFV 204 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ M + + R + G K+ V VY LI ++T++E ++ + K I ++ Sbjct: 205 EHDWNP-----MNDLQAMDRAHRLGQKKVVNVYRLITKDTLEEKIMGLQKFKMNIASTIV 259 Query: 196 N 196 N Sbjct: 260 N 260 >gi|255089631|ref|XP_002506737.1| SNF2 super family [Micromonas sp. RCC299] gi|226522010|gb|ACO67995.1| SNF2 super family [Micromonas sp. RCC299] Length = 1587 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 70/244 (28%), Gaps = 54/244 (22%) Query: 2 KQYHKFQRELYCDL---QGENIEAFNSASKTVKCLQLANGAVYYDEEKH----------- 47 K Y + L ++ N ++ ++ + D + Sbjct: 659 KCYRALFERNFSFLRQGSKDDRALANFSNLMMEVRKCCQHPFLLDGVEEAFVSQQMSKKG 718 Query: 48 -----------WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ---- 90 K++ L+ ++ KA ++ L L+ Sbjct: 719 GKRPAKTATAAELVACSGKLQLLDKLLPRLKAGGHRALIFSQMTRVLDVLEDYCRNRGHS 778 Query: 91 ------GRTLDKDPCTIQEWNEGK-----------IPLLFAHPASCGHGLNLQYGGNILV 133 G T I + G L + G G+NL + ++ Sbjct: 779 YERLDGGVTGRARQAAIDRFCCGSNATDAGHSDEGAFLFLLSTRAGGQGINLVA-ADTVI 837 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ + + + R + G + V VY L+ + T + +L R K ++ Sbjct: 838 VFDSDWNPQN-----DAQALARAHRIGQTKPVQVYRLVMRATYERDMLDRAAMKLGLEQA 892 Query: 194 LLNA 197 + ++ Sbjct: 893 IFSS 896 >gi|83772693|dbj|BAE62821.1| unnamed protein product [Aspergillus oryzae] Length = 867 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + + K+ + +N ++V H L LQ F + Sbjct: 606 NYANPEFCGKWKVLRRLLKWWHSNGDKVLVFSHSVRLLRMLQMLFHHTSYNVSYLDGSMS 665 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + E+N + + + + G GLN+ N +V W+ + Sbjct: 666 YEDRATAVDEFNSDPRQFVFLISTRAGGVGLNITS-ANKVVVVDPNWNPS-----YDLQA 719 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ LI+ TI+E+V R K + Sbjct: 720 QDRAYRIGQVRDVEVFRLISAGTIEEIVYARQIYKQQQAN 759 >gi|225432997|ref|XP_002280814.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1224 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 17/164 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQ 102 E + LE I + IV + S L L+ + + ++ Sbjct: 1059 SELLHCLERISQSRIGEKSIVFSQWTSFLDLLEIPLRRRGIGFLRYDGKVVQKQRERILK 1118 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E++E + +L + G GLNL + + WW+ +Q I RI + G Sbjct: 1119 EFSETEEKTVLLMSLKAGGVGLNLTA-ASNVFLMDPWWNPAVEEQAIMRI-----HRIGQ 1172 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +R V V I ++T++E + Q K + L + T + Sbjct: 1173 ERTVRVRRFIVKDTVEERMQQVQARKQRMITGALTDEEVRTARI 1216 Score = 35.9 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 2/30 (6%), Positives = 7/30 (23%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 + ++ Q N ++ Sbjct: 912 NYASILELLLRLRQCCNHPFLVMSRGDTQQ 941 >gi|50294037|ref|XP_449430.1| hypothetical protein [Candida glabrata CBS 138] gi|49528744|emb|CAG62406.1| unnamed protein product [Candida glabrata] Length = 920 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 74/230 (32%), Gaps = 36/230 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 +K + + D+ I S ++ N + +++ Sbjct: 567 IKAFRDIIENVRVDMNN--ITFNTSLGLINLMKKVCNSPSLLCNDPYYQSNVDSNIFTVS 624 Query: 52 ----HDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRT 93 K+ L I + +++ ++ L +Q Sbjct: 625 NKSNSSGKLTVLLELLLEIKATSPMEKVVIVSNYTQSLDIIQGLMNSNQLSNCRLDGATP 684 Query: 94 LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + +N I + G GLNL G + LV F W+ ++ Sbjct: 685 AKQRDMLVNTFNNNPNIFGFLLSAKAGGVGLNL-IGASRLVLFDNDWNPA-----VDLQA 738 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++R + G KR ++Y LI IDE +LQR K + L++ +T Sbjct: 739 MSRIHREGQKRPCYIYRLITTGCIDEKILQRQLMKHNLTRKFLSSNTSDT 788 >gi|198426669|ref|XP_002129254.1| PREDICTED: ATRX protein [Ciona intestinalis] Length = 1900 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ I ++N + + L+ + G G+NL G N + F W+ Sbjct: 1534 DYYRMDGSTKNERRKTIIDQFNNESDTRCRLMLVSTRAGGIGINL-VGANRAIVFDASWN 1592 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I RI + G + ++Y IAQ T++E + R K ++ +++ Sbjct: 1593 PTHDVQSIFRI-----YRFGQTKPCYIYRFIAQGTMEEKIYDRQVVKQSLASRVVDE 1644 >gi|145345466|ref|XP_001417230.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577457|gb|ABO95523.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 898 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 55/162 (33%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K + L ++ +A +V + L ++ + +D Sbjct: 498 SAKSRFLMAMLDRFRAEGRRTLVFSQSQATLNVVEACIREANIKFVRIDGKVNVDERDRR 557 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 Q + IP++ G GL L ++ + W+ Q ++R + Sbjct: 558 VTQFRSNADIPVMLLTARVGGLGLTLTE-ATRVIIYDPAWNPTTDNQSVDR-----AYRI 611 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V VY L+ T++E + +R K + + + + Sbjct: 612 GQTKDVVVYRLVTCGTVEEKIYRRQVFKGGVSKSATDGVSGK 653 >gi|255724926|ref|XP_002547392.1| hypothetical protein CTRG_01699 [Candida tropicalis MYA-3404] gi|240135283|gb|EER34837.1| hypothetical protein CTRG_01699 [Candida tropicalis MYA-3404] Length = 1695 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 54/125 (43%), Gaps = 7/125 (5%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + ++ +++N + KIP+ S G G+NL G + ++F Sbjct: 1452 QFLNIHGYRYMRLDGATKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLT-GADTVIF 1510 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ +++ R + G R V +Y +++ TI+ ++++ K + +++ Sbjct: 1511 YDSDWNPA-----MDKQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVV 1565 Query: 195 LNALK 199 + + Sbjct: 1566 IQEGE 1570 >gi|255943149|ref|XP_002562343.1| Pc18g05160 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587076|emb|CAP94740.1| Pc18g05160 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1022 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + + K+ + +N +++ H L LQ F + Sbjct: 594 NYANPEFCGKWKVLRKLLKWWHSNGDKVLIFSHSVRLLKMLQMLFHHTSYNVSYLDGSMS 653 Query: 94 LDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 L + E+N + + G GLN+ N +V W+ + Sbjct: 654 LQDRAKAVDEFNADSRQFVFLISTKAGGVGLNITS-ANKVVVVDPNWNPS-----YDLQA 707 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ LI+ TI+E+V R K + Sbjct: 708 QDRAYRIGQLRDVEVFRLISAGTIEEIVYARQIYKQQQAN 747 >gi|170097135|ref|XP_001879787.1| RAD26-like SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164645190|gb|EDR09438.1| RAD26-like SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1000 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 60/190 (31%), Gaps = 15/190 (7%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + ++ + + ++ Q + K+ + Sbjct: 556 QTARNRALAEIAFPEGDIPKYGTAMMQ-TQYCGKWAVLEILLKEWRKETNKV------LI 608 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-TIQEW-NEGKIPLLFAHPASCGHG 122 + ++ F+ + G T D I + N+ ++ + + G G Sbjct: 609 FTKSVKLLEMLEFHLNNKGYGFLKLDGSTKQSDRMPMIDRFHNDPEVFIFLISTLAGGTG 668 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL G N +V F W+ + + R + G R V VY L+ +++EL+ Sbjct: 669 LNLT-GANKVVIFDPNWNPAH-----DLQAMDRAFRFGQTRDVSVYRLLGAGSVEELIYA 722 Query: 183 RLRTKSTIQD 192 R K Sbjct: 723 RQIYKQQQMA 732 >gi|302901999|ref|XP_003048558.1| hypothetical protein NECHADRAFT_47402 [Nectria haematococca mpVI 77-13-4] gi|256729491|gb|EEU42845.1| hypothetical protein NECHADRAFT_47402 [Nectria haematococca mpVI 77-13-4] Length = 455 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 54/147 (36%), Gaps = 11/147 (7%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW 104 + H K+ A+ I +++ A + L + ++ Sbjct: 289 QGRSLRPHSTKLSAVVENIARSSVETKQSAAKIDHVL-----IDGRTNYSERSRRLKAFK 343 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +I +L + GLNL N++ W+ +E V R + G ++A Sbjct: 344 EDSRITVLVMSIETGAVGLNLT-VANVVHIVEPQWNPS-----VEAQAVARALRMGQQKA 397 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQ 191 V +Y I + T++E +++ K + Sbjct: 398 VTIYRYIMKGTVEERIIELQERKKKLA 424 >gi|218189474|gb|EEC71901.1| hypothetical protein OsI_04668 [Oryza sativa Indica Group] Length = 1105 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 85/211 (40%), Gaps = 32/211 (15%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVII 63 QRELY ++ N NSA + NG + + K++ L ++ Sbjct: 786 QRELYINILERNYSKLNSA--------IRNGLEVGQQATEDVFLSLIASSGKLQLLHKLL 837 Query: 64 E--KANAAPIIVAYHFNSDLARLQKAFPQ-GRTLDK---------DPCTIQEWN--EGKI 109 K +++ L L+ G + +I+E+ + + Sbjct: 838 PRLKERGNRVLIFSQMTRMLDILEDFLCSLGYKYARIDGQTSLSARQESIKEYKNIDSET 897 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G++L G + ++ + ++ ++ +R + G R V VY Sbjct: 898 FIFLMSTRAGGMGVDL-PGADRVIIYDPDFNP-----FMDLQAQSRAHRIGQTRPVVVYQ 951 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LI + +++E +LQ+ + K I+++L+N+ KK Sbjct: 952 LITKCSVEEKILQKSKQKLAIENMLMNSSKK 982 >gi|156554595|ref|XP_001604594.1| PREDICTED: hypothetical protein [Nasonia vitripennis] Length = 1968 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + I E+N K+ L + G+NL G N + F W+ Sbjct: 1017 YYRLDGSTSALEREKLINEFNVNPKVHLFLVSTRAGSLGINL-VGANRAIVFDASWNP-- 1073 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V R + G ++ +VY L+ N ++ + R +K + D +++ Sbjct: 1074 ---CHDTQAVCRVYRYGQQKNCYVYRLVTDNCLERKIYDRQISKQGMADRVVD 1123 >gi|328698504|ref|XP_001947753.2| PREDICTED: transcription termination factor 2-like [Acyrthosiphon pisum] Length = 807 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 18/148 (12%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGK- 108 + ++ N I+ + S L + K + K I+E+N+ Sbjct: 644 QKVLNGGNREKAIIVSQWTSFLYLIHKHLVYYNAKMEMFSGAIPIPKRNKIIREFNDPNG 703 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L S GLNL N + W+ + Q +RI + G + V++ Sbjct: 704 GPQILLLSLKSGCVGLNLMA-ANHMFLVDNHWNPQLEAQACDRI-----YRIGQTKPVYI 757 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Y I NTI+ +L + K I D L Sbjct: 758 YKFICSNTIETRILNIQKHKLKIADNLF 785 Score = 38.2 bits (87), Expect = 0.61, Method: Composition-based stats. Identities = 3/24 (12%), Positives = 11/24 (45%) Query: 18 ENIEAFNSASKTVKCLQLANGAVY 41 E+I+ ++ ++ Q+ + Sbjct: 536 EDIQTYHILVLLLRLRQICCHPLL 559 >gi|167999325|ref|XP_001752368.1| predicted protein [Physcomitrella patens subsp. patens] gi|162696763|gb|EDQ83101.1| predicted protein [Physcomitrella patens subsp. patens] Length = 729 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 23/194 (11%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 ++ I + A +K E+ ++ I + + IV Sbjct: 527 VEDGKIVEGSKAELLLK------SEALEIEQGETLGTGLREVSESIKIEKVDSTEKAIVF 580 Query: 75 YHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHPASCGHGL 123 + S L L+ + + + ++N ++ ++ + GL Sbjct: 581 SQWTSMLDLLELPLKKSGLCYRRLDGTMSVVARDRAVSDFNTLPEVTVMIMSLKAASLGL 640 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 N+ + ++ +WW+ E + R + G R V V +NTI++ +L Sbjct: 641 NMVA-ASHVLLLDVWWNPTT-----EDQAIDRAHRIGQTRTVNVSRFTVKNTIEDRILAL 694 Query: 184 LRTKSTIQDLLLNA 197 K I Sbjct: 695 QERKRQIVASAFGE 708 >gi|322706469|gb|EFY98049.1| DNA repair protein RAD16 [Metarhizium anisopliae ARSEF 23] Length = 1086 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 51/156 (32%), Gaps = 17/156 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW- 104 + L + + I+ F + L ++ T + +I+ + Sbjct: 920 VHELHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASIEHFM 979 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + + G LNL + + WW+ Q +R + G R Sbjct: 980 NNVDVECFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQTRP 1033 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + L +++++ ++ K+ + +NA K Sbjct: 1034 CTITRLCIEDSVESRMVLIQEKKTNMIHSTVNADDK 1069 >gi|297797715|ref|XP_002866742.1| hypothetical protein ARALYDRAFT_496925 [Arabidopsis lyrata subsp. lyrata] gi|297312577|gb|EFH43001.1| hypothetical protein ARALYDRAFT_496925 [Arabidopsis lyrata subsp. lyrata] Length = 764 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 25/196 (12%), Positives = 66/196 (33%), Gaps = 37/196 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA---------------NAAPII 72 V+ + N + + +E I+ + N ++ Sbjct: 489 LMVQLRKNCNHP----DLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVL 544 Query: 73 VAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCG 120 + + L + F LD+ I+++++ + + G Sbjct: 545 IFSQWTKLLDIMDYYFSEKGFEVCRIDGNVKLDERRRQIKDFSDEKSSCSIFLLSTRAGG 604 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + + + W+ + ++ + R + G + V VY L +++ V Sbjct: 605 LGINLTA-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTKPVHVYRLSTAQSVETRV 658 Query: 181 LQRLRTKSTIQDLLLN 196 L+R +K ++ +++ Sbjct: 659 LKRAYSKLKLEHVVIG 674 >gi|302792356|ref|XP_002977944.1| hypothetical protein SELMODRAFT_408 [Selaginella moellendorffii] gi|300154647|gb|EFJ21282.1| hypothetical protein SELMODRAFT_408 [Selaginella moellendorffii] Length = 835 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 59/162 (36%), Gaps = 23/162 (14%) Query: 52 HDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKD 97 KI AL I++K + +V F+S L + Q G + K Sbjct: 680 SSAKITALLSILDKTRAKDPSIKTVVFSQFSSMLKLAEAPLTQAGYKFVKLQGGMSAKKR 739 Query: 98 PCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + + + G GLNL + +V WW+ E + Sbjct: 740 DEAMEAFKSRSKDSPTVFLLSLKAAGVGLNLVS-ASNVVMLDPWWNPAA-----EEQAMD 793 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R V V+ L+A ++I+E +LQ K + L Sbjct: 794 RVHRLGQTRDVHVFRLVATDSIEERLLQMQEKKRAYAQIALG 835 >gi|255713090|ref|XP_002552827.1| KLTH0D02354p [Lachancea thermotolerans] gi|238934207|emb|CAR22389.1| KLTH0D02354p [Lachancea thermotolerans] Length = 1047 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 57/156 (36%), Gaps = 17/156 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW- 104 + L I + ++V F L L+ ++ I ++ Sbjct: 876 LGKLLKDIIEHKKEKVLVFSLFTQMLDILEMALTTLNINFLRLDGSTQVNDRQALIDKFY 935 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + IP+ + G G+NL N ++ F ++ + ++ R + G + Sbjct: 936 EDESIPVFILSTKAGGFGINL-VCANHVIIFDQSFNPHD-----DKQAADRSHRVGQTKT 989 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V + L+ +N+I+E +LQ + K + + K Sbjct: 990 VHITTLVTRNSIEEKILQLAKNKLALDTYISEDDNK 1025 >gi|209945942|gb|ACI97202.1| okra [Drosophila simulans] Length = 168 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIER 150 ++ K + +N+ + +S G L G N L F W+ + Sbjct: 76 MSIKKRSKVVDRFNDPESESFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DE 130 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + R + G K+ ++Y L+A +I+E +LQR K Sbjct: 131 QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKK 168 >gi|221120099|ref|XP_002160992.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 1601 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 70/196 (35%), Gaps = 13/196 (6%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + F+++ Y D + N S K + L + V + + L +I Sbjct: 1382 NDFEKDWYDDFLIPEDQHNNELS--GKLILLCEILADAEVVGDKVLVFSQSLCTLNLIEA 1439 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGH 121 + + ++ K + +N+ + L + Sbjct: 1440 TLSDIQNDNLCKWCH--GVDYFRMDGSTSVQKRTRWAEIFNDPKNERCRLFLISTRAGSL 1497 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+N+ G N ++ F W+ Q + R+ + G ++ V+VY +AQ T++E + Sbjct: 1498 GINM-VGANRVIIFDCSWNPSHDVQSVFRV-----YRFGQEKPVYVYRFVAQGTMEEKIY 1551 Query: 182 QRLRTKSTIQDLLLNA 197 +R TK +++ Sbjct: 1552 ERQITKLATAGRVVDE 1567 >gi|241948421|ref|XP_002416933.1| DNA repair protein RAD16-homologue, putative; RAD family ATP-dependent helicase, putative [Candida dubliniensis CD36] gi|223640271|emb|CAX44521.1| DNA repair protein RAD16-homologue, putative [Candida dubliniensis CD36] Length = 846 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 49/147 (33%), Gaps = 17/147 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKI 109 + + IV F S L ++ + +D ++ Sbjct: 686 KLRSDRHTIKSIVFSQFTSMLDLIEWRLKRAGFNTVKLSGSMSPQQRDNTIKHFMENTEV 745 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q ++R+ + G KR + + Sbjct: 746 EVFLVSLKAGGVALNL-CEASQVFLMDPWWNPSVEWQSMDRV-----HRIGQKRPIRITR 799 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 +++I+ +++ K+ + +N Sbjct: 800 FCIEDSIESKIIELQEKKANMIHATIN 826 Score = 35.1 bits (79), Expect = 6.5, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 26/98 (26%), Gaps = 5/98 (5%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +R+ + + N + + QLA+ + + +E + Sbjct: 530 LYSDSKRKFNDYVAEGVVLNNYANIFTLITRMRQLADHPDLVLKRIGSNAISNEIDGVIM 589 Query: 61 VIIEKANAAPII---VAYHFNSDLARLQKAFPQGRTLD 95 + A I + F + G + Sbjct: 590 CQLCDDEAEEPIESKCHHRFCRMCIQEYMESFMGASNK 627 >gi|50866|emb|CAA49560.1| enhancer-trap-locus-1 [Mus musculus] Length = 1136 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 19/193 (9%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 + + K Q N + +L + K ++ Sbjct: 927 LIFEDMEVMTDFELHVLCKQYQHINSYQLDMDLILDSGKFRALGCSLSEL--KQKGDRVV 984 Query: 73 VAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGH 121 + F L L+ + + I E+N + I + + G Sbjct: 985 LFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGL 1044 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL N+++ + + ++ R + G + V V LI+Q TI+E +L Sbjct: 1045 GINLTS-ANVVILHDIDCNP-----YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESML 1098 Query: 182 QRLRTKSTIQDLL 194 + + K ++ + Sbjct: 1099 KINQQKLKLEQDM 1111 >gi|197261380|ref|YP_002154196.1| putative helicase [Pseudomonas phage LBL3] gi|197244470|emb|CAR31205.1| putative helicase [Pseudomonas phage LBL3] Length = 519 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 86/215 (40%), Gaps = 24/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIE---AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + + LQ E+ +F++A+ K Q+A+G + E D Sbjct: 300 KVYQRVEEDYHFVLQNEDFMLDVSFDAAAARSKLKQVASGYINVYGEPVILPPEDNPRFA 359 Query: 55 -KIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQE 103 LE ++E+ II+ ++ +++ + + I + Sbjct: 360 VFTDLLEGLLEEDQERSIIIWAMRIQEIDQIKAYLEAQGISFGTYYGETKEAEREKLIDD 419 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + ++ + +PA+ G G+ L ++ ++++ D E Q +R + G Sbjct: 420 FQAKRVQVFLGNPAAAGIGITLTA-ADVAIYYTTDEDNELRMQSEDR-----NHRIGTVN 473 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +V + LI ++IDE + L K + +++ + Sbjct: 474 SVLYFDLICLDSIDEKIQTSLEWKRNLASYVVDGV 508 >gi|171691859|ref|XP_001910854.1| hypothetical protein [Podospora anserina S mat+] gi|170945878|emb|CAP72679.1| unnamed protein product [Podospora anserina S mat+] Length = 1274 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 28/218 (12%), Positives = 75/218 (34%), Gaps = 31/218 (14%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DE 54 + R ++ + + E + ++ ++ + Y + + + Sbjct: 800 QLIRSIFAQGKLKANERGSLSNILMQLRKCLCHPFIYSQAIEDRNLSPELTRRNLIEASS 859 Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQ 102 K+ LE+++ K +++ F L L+ + I Sbjct: 860 KLMLLEIMLPKLKERGHRVLIFSQFLDQLTVLEDFLMSLNLRHERLDGSQSSLEKQKKID 919 Query: 103 EWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + + G G+NL + ++ W+ + + ++R + G Sbjct: 920 AYNAPDSDIFCMLLSTRAGGVGINL-ATADTVIILDPDWNPHQ-----DIQALSRAHRIG 973 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++ V + L+ ++ +E +LQ R K + LL+ + Sbjct: 974 QRKKVLCFQLVTVDSAEEKILQIGRKKMALDHLLIETM 1011 >gi|147818386|emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera] Length = 1249 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 17/164 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQ 102 E + LE I + IV + S L L+ + + ++ Sbjct: 1084 SELLHCLERISQSRIGEKSIVFSQWTSFLDLLEIPLRRRGIGFLRYDGKVVQKQRERILK 1143 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E++E + +L + G GLNL + + WW+ +Q I RI + G Sbjct: 1144 EFSETEEKMVLLMSLKAGGVGLNLTA-ASNVFLMDPWWNPAVEEQAIMRI-----HRIGQ 1197 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +R V V I ++T++E + Q K + L + T + Sbjct: 1198 ERTVRVRRFIVKDTVEERMQQVQARKQRMITGALTDEEVRTARI 1241 Score = 35.9 bits (81), Expect = 3.9, Method: Composition-based stats. Identities = 13/133 (9%), Positives = 30/133 (22%), Gaps = 12/133 (9%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + ++ Q N + + + + A S+ Sbjct: 929 NYASILELLLRLRQCCNHPFLVMRCSXLRMCSRGDTQQYADLSKLARKFLENNPCSXTSN 988 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL---VFFSL 137 + +AF + I+ + P+ L +++ S Sbjct: 989 HSIPTRAFVEEVVGG-----IRRGENTECPICLES----ADDPVLTPCAHLMCRECLLSS 1039 Query: 138 WWDLEEHQQMIER 150 W I R Sbjct: 1040 WRTPLSGLCPICR 1052 >gi|321471114|gb|EFX82087.1| hypothetical protein DAPPUDRAFT_101480 [Daphnia pulex] Length = 821 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 77/235 (32%), Gaps = 53/235 (22%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTV---KCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 +Y +++ DL+ + E+ N AS ++ K +++ H KI L Sbjct: 509 EYQAMKKQS--DLEDDLEESANPASSSLWWSKL---------IPDDEINNIEHSGKILLL 557 Query: 60 EVIIEKAN--AAPIIVAYH----------FNS------------------DLARLQKAFP 89 I+ ++V F + L Sbjct: 558 MEILRHCEVIGDKLLVFSQSLTSLDLIEEFLAAEHLKSSAGNASAVSGTWILDTDYFRLD 617 Query: 90 QGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +N+ ++ L + G G+NL G N ++ F W+ Sbjct: 618 GSTKSAERLKFCTAFNDPKNVRVRLFLISTKAGGIGINLT-GANRVIIFDSSWNPS---- 672 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G + F+Y +AQ T++E V R K + +++ + + Sbjct: 673 -FDEQSVFRVYRLGQTKPCFIYRFVAQGTMEEKVYYRQVEKLALSRRIVDGQEMD 726 >gi|145491211|ref|XP_001431605.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124398710|emb|CAK64207.1| unnamed protein product [Paramecium tetraurelia] Length = 654 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 68/196 (34%), Gaps = 28/196 (14%) Query: 26 ASKTVKCLQLANGAVYYDEE--------KHWKEVHDEKIKALEVIIEK--ANAAPIIVAY 75 +K ++ ++ + E K++ L+ ++K I++ Sbjct: 411 MNKLMQLRKICLHPYLFPEVEDKSLPALGEHLVDVSGKMRVLDKFLQKLSEGQHQILIFS 470 Query: 76 HFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGL 123 F L L+ + I E+ + + G G+ Sbjct: 471 QFTMMLNILEDYCNFRGYEYCRIDGETEIQSRDDQIAEFTAPDSKKFIFLLSTRAGGLGI 530 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ + ++ + ++ + R + G K V VY + ++T++E +++R Sbjct: 531 NL-ATADTVIIYDSDFNPQ-----MDMQAMDRAHRIGQKSRVMVYRMACEHTVEEKIIER 584 Query: 184 LRTKSTIQDLLLNALK 199 + K L++ + Sbjct: 585 QQIKLRWDSLMVQQGR 600 >gi|146422206|ref|XP_001487044.1| hypothetical protein PGUG_00421 [Meyerozyma guilliermondii ATCC 6260] Length = 497 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 54/125 (43%), Gaps = 7/125 (5%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F + +++ + +N + KIP+ S G G+NL G + ++F Sbjct: 254 QFLNIHGYRYMRLDGATKIEERQVLTETFNRDPKIPVFILSTRSGGLGINLT-GADTVIF 312 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ +++ R + G R V +Y +++ TI+ +L++ K + +++ Sbjct: 313 YDSDWNPA-----MDKQCQDRCHRIGQSRDVHIYRFVSEYTIESNILKKANQKRHLDNVV 367 Query: 195 LNALK 199 + + Sbjct: 368 IQEGE 372 >gi|313231397|emb|CBY08512.1| unnamed protein product [Oikopleura dioica] Length = 1201 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + K I +N+ + L + G+NL +V F W+ Sbjct: 777 DYFRMDGATSGGKRHEFIGAFNDPLNMRSRLFIISTKAGCLGVNLVA-ATRVVIFDASWN 835 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G + VF+Y L+AQ T++E V +R K + +L+ Sbjct: 836 PTH-----DIQSIFRVYRIGQTKPVFIYRLVAQGTMEEKVYRRQVQKQGLAQRVLDE 887 >gi|222619629|gb|EEE55761.1| hypothetical protein OsJ_04298 [Oryza sativa Japonica Group] Length = 1129 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 85/211 (40%), Gaps = 32/211 (15%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVII 63 QRELY ++ N NSA + NG + + K++ L ++ Sbjct: 781 QRELYINILERNYSKLNSA--------IRNGLEVGQQATEDVFLSLIASSGKLQLLHKLL 832 Query: 64 E--KANAAPIIVAYHFNSDLARLQKAFPQ-GRTLDK---------DPCTIQEWN--EGKI 109 K +++ L L+ G + +I+E+ + + Sbjct: 833 PRLKERGNRVLIFSQMTRMLDILEDFLCSLGYKYARIDGQTSLSARQESIEEYKNIDSET 892 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G++L G + ++ + ++ ++ +R + G R V VY Sbjct: 893 FIFLMSTRAGGMGVDL-PGADRVIIYDPDFNP-----FMDLQAQSRAHRIGQTRPVVVYQ 946 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LI + +++E +LQ+ + K I+++L+N+ KK Sbjct: 947 LITKCSVEEKILQKSKQKLAIENMLMNSSKK 977 >gi|162135084|ref|YP_001595825.1| hypothetical protein [Pseudomonas phage YuA] gi|161513931|emb|CAO77757.1| hypothetical protein [Pseudomonas phage YuA] Length = 564 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 41/217 (18%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWK---EVHDEKIKALEVIIEKANAAPIIVAYH 76 + A + ++ ++ Q+ G + D+E + ++ L +IE++ +IV Sbjct: 356 VIAALAITRLLRLQQITCGYLPTDDEAEPVYTIPGPNRRLDLLCDLIEESQH-KVIVWAR 414 Query: 77 FNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-------------------EG 107 F D+ + + D+ + E Sbjct: 415 FQMDITLIMDALRERGISAVRYDGLVNDDERAEAKARFQGERPLYHNGQVVGREAVPPEE 474 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTRQRQAGFKRAVF 166 + + +PA+ GL L ++++S + ++I+R R + G V Sbjct: 475 QARVFVGNPAAGATGLTLTA-AKTVIYYSNSF------KLIDRLQSEDRAHRIGQTNNVL 527 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L+A++++DE V++ LR K + + K+ + Sbjct: 528 YIDLVAEDSVDEKVVEALRNKFNVASQITGDRLKDWL 564 >gi|270003081|gb|EEZ99528.1| hypothetical protein TcasGA2_TC000110 [Tribolium castaneum] Length = 863 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 72/199 (36%), Gaps = 20/199 (10%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIV 73 + E A N A++ V + + G + E KI+AL +++ IV Sbjct: 653 EEEPRVAANLANEGVGLKEASKGYLNPTNPVFMTERPSSKIRALINLLKNKISGEDKAIV 712 Query: 74 AYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGH 121 + S L + + K + +N+ +L + G Sbjct: 713 VSQWTSLLHLVAIHLENEGIPYASLDGSVVVQKRMPIVDNFNDPNSATKVLLLSLTAGGV 772 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL G N L L W+ + E R + G K+ ++VY +A TI+E + Sbjct: 773 GLNL-VGANHLFLLDLHWNPQL-----ENQAQDRIYRMGQKKDIYVYKFMALETIEERIK 826 Query: 182 QRLRTKSTIQDLLLNALKK 200 K I + +L K+ Sbjct: 827 ALQERKLEIANAMLTGSKQ 845 Score = 41.7 bits (96), Expect = 0.065, Method: Composition-based stats. Identities = 5/48 (10%), Positives = 15/48 (31%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 +Y K + +L + + + ++ Q+ + E Sbjct: 578 EYFKMRNKLLKLNRVKEVSQHEILVLLLRLRQICCHPSLIKQMLQGDE 625 >gi|258563128|ref|XP_002582309.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237907816|gb|EEP82217.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 939 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 91 GRTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +K + ++N + G GLNL G + LV F + W+ Sbjct: 671 STPANKRQYLVDDFNRSSSSSCFAFLLSAKAGGIGLNLT-GASRLVLFDVDWNPAT---- 725 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G KR +Y ++ + ++E + QR TK + D +++ Sbjct: 726 -DIQAMARIHRDGQKRHCHIYRMLLRGGLEEKIWQRQVTKIGLADSVMD 773 >gi|197261472|ref|YP_002154287.1| putative helicase [Pseudomonas phage LMA2] gi|197244562|emb|CAR31296.1| putative helicase [Pseudomonas phage LMA2] Length = 538 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 81/215 (37%), Gaps = 24/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIE---AFNSASKTVKCLQLANGAV--------YYDEEKHWKE 50 K Y + + + + LQ E+ +F++A+ K Q+A+G + E+ Sbjct: 319 KVYQRVEEDYHFVLQNEDFMLDVSFDAAAARSKLKQVASGYINVYGEPVILPPEDNPRFA 378 Query: 51 VHDEKIKALEV-------IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE 103 V + ++ L II I + + + I + Sbjct: 379 VFTDLLEGLLEEDPERSIIIWAMRIQEIGQIAAYLETQGISFGTYYGDTKEAEREKLIDD 438 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + ++ + +PA+ G G+ L ++ ++++ D E Q +R + G Sbjct: 439 FQAKRVQVFLGNPAAAGIGITLTA-ADVAIYYTTDEDNELRMQSEDR-----NHRIGTVN 492 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +V + LI ++IDE + L K + +++ + Sbjct: 493 SVLYFDLICLDSIDEKIQVSLEWKRNLASYVVDGV 527 >gi|170085497|ref|XP_001873972.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164651524|gb|EDR15764.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1754 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 29/235 (12%), Positives = 77/235 (32%), Gaps = 49/235 (20%) Query: 7 FQRELYCDLQGENIEAFNSASK---------------TVKCLQLANGAVYYDEEKHWKEV 51 Q+E+Y + N+E ++ + + Y E+ + + Sbjct: 1107 LQKEVYRSILSHNLELLKGLTQPKFGGPTTKGRLNNILMHLRKCLQHPYLYAEDIEPRGL 1166 Query: 52 H-----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-------- 90 K++ L+ ++ K +++ F L ++ Sbjct: 1167 PPQETHEKLIDGSAKLRFLKALLPKLKARGHRVLLFSQFVIALNVIEDFLQGEGYKFLRL 1226 Query: 91 --GRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + E+N + G G+NL Y + ++ F ++ Sbjct: 1227 DGDTKGSERQKGMDEFNRPGSDYFVYLLTTRAGGVGINL-YTADTVIIFDPDFNPH---- 1281 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G K+ V+ L+ +++ +E ++Q + K + L++ + + Sbjct: 1282 ----QAIARAYRYGQKKTCLVFKLMVKDSAEERIMQIGKKKLVLDHLIVQKMDDD 1332 >gi|134080909|emb|CAK46426.1| unnamed protein product [Aspergillus niger] Length = 971 Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 53/155 (34%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I+ + N + Sbjct: 809 KLRSKKQTLKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQRQNSIEYFMNNVDV 868 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 869 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 922 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + +N + E + Sbjct: 923 LCIEDSVESRIVLLQEKKANLINGTINKDQGEALE 957 >gi|242061806|ref|XP_002452192.1| hypothetical protein SORBIDRAFT_04g021470 [Sorghum bicolor] gi|241932023|gb|EES05168.1| hypothetical protein SORBIDRAFT_04g021470 [Sorghum bicolor] Length = 1024 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 60/168 (35%), Gaps = 19/168 (11%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 V KI AL +E +++ A IV + + L LQ + + Sbjct: 855 VESSKISALLQELEVLRSSGAKSIVFSQWTAFLDLLQIPLSRNNFSFARLDGTLNLQQRE 914 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+E+ + I +L + G G+NL + WW+ +E V R Sbjct: 915 KVIKEFSEDKGILVLLMSLKAGGVGINLTA-ASNAFVMDPWWNPA-----VEEQAVMRIH 968 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G + V + I + T++E + K + L + T + Sbjct: 969 RIGQTKTVSIRRFIVKGTVEERMEAVQARKQRMISGALTDQEVRTARI 1016 Score = 43.2 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 21/193 (10%), Positives = 43/193 (22%), Gaps = 27/193 (13%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y R + ++ Q + +E D K K Sbjct: 691 YEALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFADLK-K 749 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + + N A + S +QE +G+ Sbjct: 750 LAKRFLRGGNGAVNGDSSCIPSRAYI--------------EEVVQELQKGEGECPIC--L 793 Query: 118 SCGHGLNLQYGGNIL---VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 L + L S W + R +++Q + +N Sbjct: 794 EAFEDAVLTPCAHRLCRECLLSSWRSATAGLCPVCRKSMSKQDLITAPTDNRFQIDVEKN 853 Query: 175 TID-ELVLQRLRT 186 ++ + L+ Sbjct: 854 WVESSKISALLQE 866 >gi|225436357|ref|XP_002270070.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] Length = 1036 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 17/167 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT------ 93 D EK+W E LE+ + + I+ + + L LQ + Sbjct: 858 FQIDVEKNWMESSKVAALLLELENLCSVGSKSILFSQWTAFLDLLQIPLSRSNISFVRLD 917 Query: 94 ----LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I+++ E I +L + G G+NL + WW+ +Q + Sbjct: 918 GTLNQQQREKVIKQFSEESNILVLLMSLKAGGVGINLTA-ASNAFVLDPWWNPAVEEQAV 976 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI + G + V + I + T++E +L K + L Sbjct: 977 MRI-----HRIGQTKRVMIKRFIVKGTVEERMLAVQARKQRMISGAL 1018 >gi|159464126|ref|XP_001690293.1| predicted protein [Chlamydomonas reinhardtii] gi|158284281|gb|EDP10031.1| predicted protein [Chlamydomonas reinhardtii] Length = 116 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 7/115 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F + ++ +Q +N + KI + S G G+NL G + ++F+ Sbjct: 8 FLNLHGHTYMRLDGATKPEQRQILMQRFNTDPKIFVFILSTRSGGVGINLT-GADTVIFY 66 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 W+ ++ R + G R V +Y L++ NTI+E +L++ K + Sbjct: 67 DSDWNPA-----MDAQAQDRCHRIGQTREVHIYRLVSTNTIEENILRKFNQKRQL 116 >gi|302819037|ref|XP_002991190.1| hypothetical protein SELMODRAFT_429547 [Selaginella moellendorffii] gi|300141018|gb|EFJ07734.1| hypothetical protein SELMODRAFT_429547 [Selaginella moellendorffii] Length = 959 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 IV + S L L+ + T+ + + E+N ++ ++ + Sbjct: 806 KAIVFSQWTSMLDLLEPQLRKADLRFSRLDGTMTVVERDSAVTEFNTNPEVSVMIMSLKA 865 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ +WW+ E + R + G R V V +NTI++ Sbjct: 866 ASLGLNMVAACH-VLLLDVWWNPTT-----EDQAIDRAHRIGQTRPVHVSRFTVKNTIED 919 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L K + Sbjct: 920 RILALQERKKQMVSSAFGE 938 Score = 35.5 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 8/93 (8%), Positives = 22/93 (23%), Gaps = 5/93 (5%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-----KIKALEVIIE 64 ++Y + N ++ Q + + E + D K+ + Sbjct: 614 QVYAEEGTLQSNYVNILYMLLRLRQACDHPLLVKETNNESTEFDAVENVKKLALERRVEL 673 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 + +D+ G + Sbjct: 674 QNTLDRNKSICTICADVPEWAVISWCGHVFCRQ 706 >gi|327273061|ref|XP_003221301.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Anolis carolinensis] Length = 1106 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 72/197 (36%), Gaps = 21/197 (10%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAY 75 E++ + C Q AN ++ + + + K + L I+ + +++ Sbjct: 900 EDMSVMTDYELHLLCKQYAN--IHDFKLEMDLILDSGKFRTLIHILSEFKEKGNRVVLFS 957 Query: 76 HFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 F L L+ + I E+N + I + + G G+N Sbjct: 958 QFTMMLDILEVLLKHEQHRYLRLDGKTQIADRIHLIDEFNSDMGIFIFLLSTKAGGLGIN 1017 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L N+++ + + ++ R + G R V V LI++ TI+E +L+ Sbjct: 1018 LTS-ANVVILHDIDCNP-----YNDKQAEDRCHRVGQTREVKVIRLISKGTIEESMLKIS 1071 Query: 185 RTKSTIQDLLLNALKKE 201 + K ++ + A E Sbjct: 1072 QQKLKLEQDMTAADAGE 1088 >gi|212539075|ref|XP_002149693.1| alpha-1,6-mannosyltransferase subunit, putative [Penicillium marneffei ATCC 18224] gi|210069435|gb|EEA23526.1| alpha-1,6-mannosyltransferase subunit, putative [Penicillium marneffei ATCC 18224] Length = 1874 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 20/163 (12%), Positives = 51/163 (31%), Gaps = 17/163 (10%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPC 99 + + + + + + +V + L F + Sbjct: 823 GLPSKVASLVRQLKAQPSDVKSVVFSTWRMSLDVVESGLKQAQIPCLRFDGKVPQKERKS 882 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ + + +L + GL L + W+ +E + R + Sbjct: 883 VIDKFKHDPSVSVLLLTLSCGAVGLTLTE-ASCAYLMEPHWNPT-----VEEQALARIHR 936 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V ++T +E V++ R+K + L ++ + Sbjct: 937 LGQKKEVTTVRFYIKDTFEERVMELQRSKDELAGTLFSSENAQ 979 >gi|145357178|ref|XP_001422798.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144583042|gb|ABP01157.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 806 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 19/151 (12%) Query: 60 EVIIEKANAA--PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NE 106 + + N IV + + + ++ + + + +Q + + Sbjct: 643 RDMRNQENGHLNKAIVFSQYTAMIEIVEWRLKKAKFTIAKLLGSMPVTQRAANLQAFRED 702 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + ++ S G GLNLQ N + WW+ V R + G R V Sbjct: 703 PNVSVILMSLKSGGEGLNLQA-ANYVYVLEPWWNPAVEM-----QAVMRAHRIGQLRPVT 756 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + TI+E +++ K + + ++ Sbjct: 757 AVRFSTKGTIEERMMELQEKKQLVFEGCMDG 787 >gi|171693995|ref|XP_001911922.1| hypothetical protein [Podospora anserina S mat+] gi|170946946|emb|CAP73750.1| unnamed protein product [Podospora anserina S mat+] Length = 957 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 19/153 (12%), Positives = 49/153 (32%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + L + + I+ F + L ++ T + +I + Sbjct: 791 VHELHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASIHHFM 850 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G LNL + + WW+ Q +R + G R Sbjct: 851 TNPDVECFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQTRP 904 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + L +++++ ++ K+ + + +N+ Sbjct: 905 CTITRLCIEDSVESRMVLLQEKKTNMINSTINS 937 >gi|302819164|ref|XP_002991253.1| hypothetical protein SELMODRAFT_429604 [Selaginella moellendorffii] gi|300140964|gb|EFJ07681.1| hypothetical protein SELMODRAFT_429604 [Selaginella moellendorffii] Length = 959 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 IV + S L L+ + T+ + + E+N ++ ++ + Sbjct: 806 KAIVFSQWTSMLDLLEPQLRKADLRFSRLDGTMTVVERDSAVTEFNTNPEVSVMIMSLKA 865 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ +WW+ E + R + G R V V +NTI++ Sbjct: 866 ASLGLNMVAACH-VLLLDVWWNPTT-----EDQAIDRAHRIGQTRPVHVSRFTVKNTIED 919 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L K + Sbjct: 920 RILALQERKKQMVSSAFGE 938 Score = 35.5 bits (80), Expect = 4.5, Method: Composition-based stats. Identities = 8/93 (8%), Positives = 22/93 (23%), Gaps = 5/93 (5%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-----KIKALEVIIE 64 ++Y + N ++ Q + + E + D K+ + Sbjct: 614 QVYAEEGTLQSNYVNILYMLLRLRQACDHPLLVKETNNESTEFDAVENVKKLALERRVEL 673 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 + +D+ G + Sbjct: 674 QNTLDRNKSICTICADVPEWAVISWCGHVFCRQ 706 >gi|254572878|ref|XP_002493548.1| Swi2/Snf2-related ATPase that is the structural component of the SWR1 complex [Pichia pastoris GS115] gi|238033347|emb|CAY71369.1| Swi2/Snf2-related ATPase that is the structural component of the SWR1 complex [Pichia pastoris GS115] gi|328354627|emb|CCA41024.1| helicase SWR1 [Pichia pastoris CBS 7435] Length = 1583 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 69/178 (38%), Gaps = 19/178 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR------- 83 QL +K + K++ L ++ + +N ++ L Sbjct: 1281 HQLQTKLSIAFPDKSLLQYDCGKLQKLASLLLELKSNGHRALIFTQMTKVLDILEQFLNI 1340 Query: 84 --LQKAFPQGRTLDKDPCTI-QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + G T +D + + +N + +I S G G+NL G + ++F+ W Sbjct: 1341 QGYRYMRLDGATKIEDRQVLTERFNKDDRITCFILSTRSGGLGINLT-GADTVIFYDSDW 1399 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +++ R + G R V +Y +++ TI+ +L++ K + ++++ Sbjct: 1400 NPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILKKANQKRQLDNVIIQE 1452 >gi|212535616|ref|XP_002147964.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] gi|210070363|gb|EEA24453.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] Length = 939 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 62/171 (36%), Gaps = 24/171 (14%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKD 97 KIKAL I+ +A +V + S L ++ + +D Sbjct: 752 PSSKIKALIKILTAKGQAEQTKTVVFSQWTSFLDIIEPHLTANDVRFTRIDGKLNSNKRD 811 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + N+ K +L A C GLNL N ++ WW IE + R Sbjct: 812 QAIAEFSNDPKCKVLLASLNVCSVGLNLVA-ANQVILCDSWWAPA-----IEDQAIDRVY 865 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKKETIH 204 + G R V+ L+ + ++++ VL+ K + L + K E+ Sbjct: 866 RLGQTRETMVWRLVMEGSVEDNVLKIQAAKRELSSTALSERTDKKKGESTQ 916 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 14/54 (25%), Gaps = 9/54 (16%) Query: 1 MKQYHKFQRELYCDLQG---------ENIEAFNSASKTVKCLQLANGAVYYDEE 45 +K+Y FQ E L + ++ Q+ N Sbjct: 588 LKKYEMFQNEARGMLDKYKHQVSGPNGATTYSHVLEVLLRLRQVCNHWSLCKNR 641 >gi|169624246|ref|XP_001805529.1| hypothetical protein SNOG_15379 [Phaeosphaeria nodorum SN15] gi|111056192|gb|EAT77312.1| hypothetical protein SNOG_15379 [Phaeosphaeria nodorum SN15] Length = 1058 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 45/150 (30%), Gaps = 17/150 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKI 109 + K IV F S L ++ + + + Sbjct: 897 KLRSKKQTLKSIVFSQFTSMLQLIEWRLRRAGFNTVMLDGSMTPAMRQKSIDHFMTNPDV 956 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G KR + Sbjct: 957 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQKRPCVITR 1010 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 L +++++ ++ K+ + +N K Sbjct: 1011 LCIEDSVESRMVALQEKKAAMIAGTVNNDK 1040 >gi|73997422|ref|XP_867833.1| PREDICTED: similar to chromodomain helicase DNA binding protein 4 isoform 13 [Canis familiaris] Length = 1918 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 26/240 (10%), Positives = 64/240 (26%), Gaps = 52/240 (21%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + L + + + + N + + Sbjct: 972 KYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGS 1031 Query: 61 VIIE---------------KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 +I K +++ L L+ G T + Sbjct: 1032 ALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGN 1091 Query: 96 KDPCTIQEWN-EGKIPL-------------------LFAHPASCGHGLNLQYGGNILVFF 135 I +N +G+ + G G+NL + ++ + Sbjct: 1092 MRQEAIDRFNGKGRSRFHAGSPTWDSIQAPGAQQFCFLLSTRAGGLGINL-ATADTVIIY 1150 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 1151 DSDWNP-----HNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 1205 >gi|296807704|ref|XP_002844237.1| Fun30p [Arthroderma otae CBS 113480] gi|238843720|gb|EEQ33382.1| Fun30p [Arthroderma otae CBS 113480] Length = 1138 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + + K+ L ++ N I++ F + Sbjct: 946 KNKEWMMSGKVDKLCELLTNFIANGDRILIFSQFTMVMDILEQVLETQNIKFFRLDGTTS 1005 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++E IP+ + G G+NL N ++ F ++ + + Sbjct: 1006 VEDRQSILDAFHEQVDIPVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDIQA 1059 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 1060 ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 1101 >gi|307180292|gb|EFN68325.1| Lymphoid-specific helicase [Camponotus floridanus] Length = 773 Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 65/186 (34%), Gaps = 28/186 (15%) Query: 33 LQLANGAVYYDEEKHWKEVH---------DEKIKALEVIIEKAN--AAPIIVAYHFNSDL 81 ++ N + K+ L+ ++ K + +++ L Sbjct: 533 KKIVNHPYLVHCPLDSVGLPKIDNDLIRSSGKLLVLDAMLAKLHARGHKVLLFSTMTMIL 592 Query: 82 ARLQKA-----------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 ++ + + ++ N+ + L + G GLNL + Sbjct: 593 DMIEDYLSLRDYNYVRLDGRIKIEERKENIKTFNNDPNVFLFLISTRAGGVGLNL-ASAD 651 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + W+ + + + R + G + V VY L + T+DE +++R K + Sbjct: 652 TVIIYDSDWNPQA-----DIQAMARCHRIGQTKPVVVYRLCTRGTVDETIIKRSEAKRIL 706 Query: 191 QDLLLN 196 + ++++ Sbjct: 707 EKVVIS 712 >gi|297830680|ref|XP_002883222.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297329062|gb|EFH59481.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1046 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 44/139 (31%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPAS 118 I+ + L ++ + + + + ++ + Sbjct: 893 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKNPDVKVMLMSLKA 952 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ + ++ LWW+ E + R + G R V V + ++T+++ Sbjct: 953 GNLGLNMVAACH-VILLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVTRITIKDTVED 1006 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L K T+ Sbjct: 1007 RILTLQEDKRTMVASAFGE 1025 >gi|19075201|ref|NP_587701.1| Rad16 homolog Rhp16 [Schizosaccharomyces pombe 972h-] gi|3647341|emb|CAA21065.1| Rad16 homolog Rhp16 [Schizosaccharomyces pombe] Length = 963 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 17/147 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPAS 118 IV F S L + + G T TI+ + N+ I + + Sbjct: 812 KSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSNDINITIFLVSLKA 871 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q ++RI + G KR + V L +N+I+ Sbjct: 872 GGVALNLTE-ASQVFMMDPWWNGAVQWQAMDRI-----HRIGQKRPIKVITLCIENSIES 925 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 +++ K+ + ++ +K + Sbjct: 926 KIIELQEKKAQMIHATIDQDEKALNQL 952 >gi|323456317|gb|EGB12184.1| hypothetical protein AURANDRAFT_19973 [Aureococcus anophagefferens] Length = 216 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I++++ + F + G G+NL ++ F + W+ + + + R Sbjct: 129 RQALIEDFSSSDAVVFFLSVRAAGVGINLHA-ATRVILFDVSWNPAD-----DAQAIARA 182 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +R VFVY L+A T++E V R K Sbjct: 183 HRFGQERPVFVYRLVAAGTVEERVFNRQIAK 213 >gi|55959598|emb|CAI12731.1| transcription termination factor, RNA polymerase II [Homo sapiens] Length = 143 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 7/105 (6%) Query: 94 LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++ +N + ++ + G GLNL GGN L + W+ Q +RI Sbjct: 26 PKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLT-GGNHLFLLDMHWNPSLEDQACDRI- 83 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 84 ----YRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSG 124 >gi|149408270|ref|YP_001294549.1| hypothetical protein ORF041 [Pseudomonas phage M6] Length = 564 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 41/217 (18%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWK---EVHDEKIKALEVIIEKANAAPIIVAYH 76 + A + ++ ++ Q+ G + D+E + ++ L +IE++ +IV Sbjct: 356 VIAALAITRLLRLQQITCGYLPTDDEAEPVYTIPGPNRRLDLLCELIEESQH-KVIVWAR 414 Query: 77 FNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-------------------EG 107 F D+ + + D+ + E Sbjct: 415 FQMDITLIMDALRERGISAVRYDGLVNDDERADAKARFQGERPLYHNGQVVGREAVPPEE 474 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTRQRQAGFKRAVF 166 + + +PA+ GL L ++++S + ++I+R R + G V Sbjct: 475 QARVFVGNPAAGATGLTLTA-AKTVIYYSNSF------KLIDRLQSEDRAHRIGQTNNVL 527 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L+A++++DE V++ LR K + + K+ + Sbjct: 528 YIDLVAEDSVDEKVVEALRNKFNVASQITGDRLKDWL 564 >gi|147857221|emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera] Length = 874 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 63/160 (39%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 H K++ALE ++ ++ I++ + L L+K + Sbjct: 515 KHCGKMRALEKLMLSWVSHGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQ 574 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++N + + G GLNL N +V F W+ + + R Sbjct: 575 SLVDDFNSSPSKQVFLISTRAGGLGLNLVS-ANRVVIFDPNWNPAQ-----DLQAQDRSF 628 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR V V+ L+A +++ELV R K + ++ ++ Sbjct: 629 RYGQKRHVVVFRLLAAGSLEELVYSRQVYKQQLSNIAISG 668 >gi|299751451|ref|XP_001830276.2| hypothetical protein CC1G_01912 [Coprinopsis cinerea okayama7#130] gi|298409380|gb|EAU91423.2| hypothetical protein CC1G_01912 [Coprinopsis cinerea okayama7#130] Length = 1032 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 6/99 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E ++ + GLNL N + WW Q+ IE V R + G K+ V Sbjct: 905 ESNPRVMLISLKAGALGLNLT-VANHVYLMDPWW-----QEGIESQAVDRVNRIGQKKPV 958 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 VY LIA+NT++ VL+ K + + +K Sbjct: 959 HVYQLIAENTVESKVLEIQDRKKQLVKQAFSGIKSRETQ 997 Score = 36.3 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 9/109 (8%), Positives = 25/109 (22%), Gaps = 20/109 (18%) Query: 2 KQYHKFQRELYCDLQGENIE------AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y + + ++ N S + Q+A + + E Sbjct: 726 RIYDQIEEISQQRIEKMMSSFAPAFVQSNVLSMLTRLRQIALHPGLVPGQYLEQLRAAEA 785 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW 104 + + +A P + + + I + Sbjct: 786 AEGMVGETLEAEGIPYVRF--------------DGQMSAKRRQEAIARF 820 >gi|238879242|gb|EEQ42880.1| DNA repair protein RAD16 [Candida albicans WO-1] Length = 852 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 49/147 (33%), Gaps = 17/147 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKI 109 + + IV F S L +Q + +D ++ Sbjct: 692 KLRSDRHTIKSIVFSQFTSMLDLIQWRLKRAGFNTVKLSGSMSPQQRDNTIKHFMENTEV 751 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q ++R+ + G KR + + Sbjct: 752 EVFLVSLKAGGVALNL-CEASQVFLMDPWWNPSVEWQSMDRV-----HRIGQKRPIRITR 805 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 +++I+ +++ K+ + +N Sbjct: 806 FCIEDSIESKIIELQEKKANMIHATIN 832 Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 26/98 (26%), Gaps = 5/98 (5%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +R+ + + N + + QLA+ + + +E + Sbjct: 536 LYSDSKRKFNDYVAEGVVLNNYANIFTLITRMRQLADHPDLVLKRVGSNAISNEIDGVIM 595 Query: 61 VIIEKANAAPII---VAYHFNSDLARLQKAFPQGRTLD 95 + A I + F + G + Sbjct: 596 CQLCDDEAEEPIESKCHHRFCRMCIQEYMESFMGASNK 633 >gi|9629985|ref|NP_046203.1| global transactivator [Orgyia pseudotsugata MNPV] gi|2493353|sp|O10302|GTA_NPVOP RecName: Full=Probable global transactivator; AltName: Full=ATP-dependent helicase GTA gi|7514943|pir||T10316 global transactivator - Orgyia pseudotsugata nuclear polyhedrosis virus gi|1911293|gb|AAC59046.1| global transactivator [Orgyia pseudotsugata MNPV] Length = 498 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 69/226 (30%), Gaps = 37/226 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKE----- 50 + Y++ + A + + Q+ + E Sbjct: 264 RVYNELKSASQRAYDDAVASADKAGGMQDVLWLLCRLRQVCCHPALTKCAAMFPEHAHIF 323 Query: 51 ---VHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL---------- 94 K + +++ +++ + L + + Sbjct: 324 EPAYESSKCRRALELVQRVLDTPDDKVVLVSQWVEFLQLVAGLLRRRGVPILLYTGQLRV 383 Query: 95 DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ ++N + +L G GLNL GGN ++ W+ + IE Sbjct: 384 EERTAVENQFNAADSPYRVLLMSIKCGGVGLNLT-GGNHIIMLEPHWNPQ-----IELQA 437 Query: 153 VTRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ +VY +I +N+I+ + R K T + + + Sbjct: 438 QDRIHRMGQKKRTYVYKMIVDEENSIERYMKARQDKKLTFVNKVFD 483 >gi|242786879|ref|XP_002480891.1| DNA excision repair protein (Rad26L), putative [Talaromyces stipitatus ATCC 10500] gi|218721038|gb|EED20457.1| DNA excision repair protein (Rad26L), putative [Talaromyces stipitatus ATCC 10500] Length = 1052 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 17/160 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRT 93 + + K+ + AN ++V H L LQ F + Sbjct: 616 NYANPEFCGKWKVLRKLLKWWHANGDKVLVFSHSVRLLKMLQMLFNHTSYNVSYLDGAMS 675 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + E+N + + + + G GLN+ N +V W+ + Sbjct: 676 YEDRAKAVDEFNSDPQQFVFLISTRAGGVGLNIVS-ANKVVVVDPNWNPSH-----DLQA 729 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ LI+ TI+E+V R K + Sbjct: 730 QDRAYRIGQHRDVEVFRLISAGTIEEIVYARQIYKQQQAN 769 >gi|68468819|ref|XP_721468.1| hypothetical protein CaO19.2969 [Candida albicans SC5314] gi|68469363|ref|XP_721196.1| hypothetical protein CaO19.10486 [Candida albicans SC5314] gi|46443104|gb|EAL02388.1| hypothetical protein CaO19.10486 [Candida albicans SC5314] gi|46443387|gb|EAL02669.1| hypothetical protein CaO19.2969 [Candida albicans SC5314] Length = 852 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 49/147 (33%), Gaps = 17/147 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKI 109 + + IV F S L +Q + +D ++ Sbjct: 692 KLRSDRHTIKSIVFSQFTSMLDLIQWRLKRAGFNTVKLSGSMSPQQRDNTIKHFMENTEV 751 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q ++R+ + G KR + + Sbjct: 752 EVFLVSLKAGGVALNL-CEASQVFLMDPWWNPSVEWQSMDRV-----HRIGQKRPIRITR 805 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 +++I+ +++ K+ + +N Sbjct: 806 FCIEDSIESKIIELQEKKANMIHATIN 832 Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 26/98 (26%), Gaps = 5/98 (5%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +R+ + + N + + QLA+ + + +E + Sbjct: 536 LYSDSKRKFNDYVAEGVVLNNYANIFTLITRMRQLADHPDLVLKRVGSNAISNEIDGVIM 595 Query: 61 VIIEKANAAPII---VAYHFNSDLARLQKAFPQGRTLD 95 + A I + F + G + Sbjct: 596 CQLCDDEAEEPIESKCHHRFCRMCIQEYMESFMGASNK 633 >gi|145512521|ref|XP_001442177.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409449|emb|CAK74780.1| unnamed protein product [Paramecium tetraurelia] Length = 1014 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 73/196 (37%), Gaps = 28/196 (14%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH--------DEKIKALEVIIEKANA--APIIVAY 75 +K ++ ++ + E + K++ L++ ++K + +++ Sbjct: 411 MNKLMQLRKICLHPYLFPEVEDKSLPPLGEHLVEVAGKMRVLDIFLKKLSDGTHQVLIFS 470 Query: 76 HFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIP--LLFAHPASCGHGL 123 F L L+ + + I E+ + + + G G+ Sbjct: 471 QFTMMLNILEDYCNYRKYDYCRIDGETEIQQRDDQIAEFTKPDSKKFIFLLSTRAGGLGI 530 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ + ++ + ++ + R + G K V VY + ++TI+E +++R Sbjct: 531 NL-ATADTVIIYDSDFNPQ-----MDMQAMDRAHRIGQKNRVMVYRMACEHTIEEKIIER 584 Query: 184 LRTKSTIQDLLLNALK 199 + K L++ + Sbjct: 585 QQIKLRWDSLMIQQGR 600 >gi|326681197|ref|XP_003201743.1| PREDICTED: transcription activator BRG1-like, partial [Danio rerio] Length = 771 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 67/209 (32%), Gaps = 27/209 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y Q + G + S S+ + G + K + L+ I Sbjct: 315 LYRHMQAKGVLLTDGSEKDKKESFSEHL-------GFSGGIVQGLDLYRASGKFEVLDRI 367 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIP 110 + K A +++ S + ++ F ++ +N+ Sbjct: 368 LPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPASQ 427 Query: 111 --LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNLQ + ++ F W+ + + R + G V V Sbjct: 428 YFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQDRAHRIGQLNEVRVL 481 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L N+++E +L + K + ++ A Sbjct: 482 RLCTVNSVEEKILAAAKYKLNVDQKVIQA 510 >gi|302845062|ref|XP_002954070.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f. nagariensis] gi|300260569|gb|EFJ44787.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f. nagariensis] Length = 520 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 36/226 (15%), Positives = 68/226 (30%), Gaps = 59/226 (26%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------------------------- 52 S +L N + H + Sbjct: 301 TSGVLSAITSLKKLCNHPKLIYDAVHRRFSPGHVRSCSCLSDVGSLFPPGLFDNGRVGRG 360 Query: 53 ---------DEKIK---ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------- 90 K+ + ++ I++ ++ S L + + Sbjct: 361 GMAAGWETLSGKMAVLARMLHVLYTETHDRIVLVSNYTSSLDLFAQLCRERGYPFVRLDG 420 Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T++K ++ +N+ + G GLNL G N LV F W+ Q Sbjct: 421 TTTINKRQKLVKVFNDPAERQFAFLLSSKAGGCGLNL-IGANRLVLFDPDWNPANDQ--- 476 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G ++ VFVY ++ +I+E V QR +K ++ L+ Sbjct: 477 --QAAARVWRDGQRKRVFVYRFLSTGSIEEKVYQRQLSKEGLKQLV 520 >gi|212529714|ref|XP_002145014.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Penicillium marneffei ATCC 18224] gi|210074412|gb|EEA28499.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Penicillium marneffei ATCC 18224] Length = 900 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 26/201 (12%), Positives = 61/201 (30%), Gaps = 30/201 (14%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----------HDEKIKALEVIIEK- 65 E + + ++ ++ + D + + K ALE +++ Sbjct: 379 SEKGSGRSVTNVLMELRKICVHPLLVDTMERGNDDADAMIRELVHTSSKFIALERLLDHE 438 Query: 66 --ANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 N +++ F ++ + + + + K + Sbjct: 439 VIQNNKKMLIFAGFDYALDCCQSLLHAMNISHLRLDGNTPYAMRKLNVHRFQKQDKHRVF 498 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G + L ++VF W+ I R + G +AV V L Sbjct: 499 VIAMRAGGEDITLTS-AEVIVFMDFDWNPS-----IMAQAEARAHRIGQTKAVTVVKLCT 552 Query: 173 QNTIDELVLQRLRTKSTIQDL 193 + T++ +L+RL K + Sbjct: 553 RGTVESQMLERLNNKLYLASK 573 >gi|84995999|ref|XP_952721.1| DNA repair helicase [Theileria annulata strain Ankara] gi|65303718|emb|CAI76095.1| DNA repair helicase, putative [Theileria annulata] Length = 965 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 53/159 (33%), Gaps = 21/159 (13%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAF------------PQGRTLDKDP 98 K+ II K I++ + L + T+ Sbjct: 638 SSKLNVSLKIIEMWKKENKKILLFTQTTTMLNIIYDHLLEIYDKDEILILFGKHTVSNRN 697 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ + + K+ ++ G GLNL ++ + W+ R Sbjct: 698 KIIERFSTDDKVFIMILTTKVGGIGLNLTA-ATRIIIYDPDWNPMTDM-----QAKERCY 751 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K V +Y LI +TI+E + QR K + +L+ Sbjct: 752 RIGQKNEVIIYRLITASTIEEKIYQRQLYKYYLSQQILS 790 >gi|242033923|ref|XP_002464356.1| hypothetical protein SORBIDRAFT_01g016830 [Sorghum bicolor] gi|241918210|gb|EER91354.1| hypothetical protein SORBIDRAFT_01g016830 [Sorghum bicolor] Length = 888 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPC 99 H K++ALE ++ I++ + L L+K F ++ Sbjct: 530 HCGKMRALERLLSLWTQQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQS 589 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G+NL N +V F W+ + + R + Sbjct: 590 LVDEFNRSPSKQVFLISTRAGNLGVNLVS-ANRVVIFDPSWNPAQ-----DLQAQDRSFR 643 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G +R V V+ L+ +++EL+ R K + ++ ++ Sbjct: 644 YGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSG 682 >gi|242038313|ref|XP_002466551.1| hypothetical protein SORBIDRAFT_01g009790 [Sorghum bicolor] gi|241920405|gb|EER93549.1| hypothetical protein SORBIDRAFT_01g009790 [Sorghum bicolor] Length = 836 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 68/193 (35%), Gaps = 29/193 (15%) Query: 27 SKTVKCLQLANGA-----------VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 S ++ + +Y K ++ ++ + A +++ Sbjct: 560 SLCIQLRKNCAHPDLLEAAFGTTSLYPPVNKLLEQCGKFQLLDRLLTSLLARKHKVLIFS 619 Query: 76 HFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGL 123 + L L+ L++ I E+N+ + + + G G+ Sbjct: 620 QWTKVLDILEYYLDSKGLGVCRIDGSVNLEERRRQIAEFNDVNSSLNVFILSTRAGGLGI 679 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + + + W+ + ++ + R + G R V VY L ++++E +++R Sbjct: 680 NLTS-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTRPVHVYRLATSHSVEERIIKR 733 Query: 184 LRTKSTIQDLLLN 196 K ++ +++ Sbjct: 734 AFGKLKLEHVVIG 746 >gi|115446443|ref|NP_001047001.1| Os02g0527100 [Oryza sativa Japonica Group] gi|49388292|dbj|BAD25407.1| putative DNA repair protein rad8 [Oryza sativa Japonica Group] gi|113536532|dbj|BAF08915.1| Os02g0527100 [Oryza sativa Japonica Group] Length = 810 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 57/158 (36%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDP 98 V KI L +E + + A I+ + + L LQ + + Sbjct: 641 VESSKISFLLQELEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLDGTLNLQQRE 700 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+E+ + I +L + G G+NL + WW+ +Q I RI Sbjct: 701 KVIKEFSEDKSILVLLMSLKAGGVGINLTA-ASNAFVMDPWWNPAVEEQAIMRI-----H 754 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G ++V + I + T++E + K + L Sbjct: 755 RIGQTKSVSIKRFIVKGTVEERMEAVQARKQRMISGAL 792 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 14/193 (7%), Positives = 43/193 (22%), Gaps = 28/193 (14%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y R + ++ Q + +E D Sbjct: 478 YDALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVLSRGDTQEFADLNKL 537 Query: 58 ALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 A + N + + + ++ + + + ++ + + Sbjct: 538 AKRFLHGGNGAVNGDSSLPSRAYIEEVVQELQKGEGECPI-----CLEAFED-----AVL 587 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 P + S W + R +++Q + +N Sbjct: 588 TPCAHRLCRE--------CLLSSWRSASAGLCPVCRKSMSKQDLITAPTDNRFQIDVEKN 639 Query: 175 TID-ELVLQRLRT 186 ++ + L+ Sbjct: 640 WVESSKISFLLQE 652 >gi|225446400|ref|XP_002274640.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|302143309|emb|CBI21870.3| unnamed protein product [Vitis vinifera] Length = 874 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 63/160 (39%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 H K++ALE ++ ++ I++ + L L+K + Sbjct: 515 KHCGKMRALEKLMLSWVSHGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQ 574 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++N + + G GLNL N +V F W+ + + R Sbjct: 575 SLVDDFNSSPSKQVFLISTRAGGLGLNLVS-ANRVVIFDPNWNPAQ-----DLQAQDRSF 628 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR V V+ L+A +++ELV R K + ++ ++ Sbjct: 629 RYGQKRHVVVFRLLAAGSLEELVYSRQVYKQQLSNIAISG 668 >gi|225436359|ref|XP_002270098.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] Length = 1016 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 17/167 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT------ 93 D EK+W E LE+ + + I+ + + L LQ + Sbjct: 838 FQIDVEKNWMESSKVAALLLELENLCSVGSKSILFSQWTAFLDLLQIPLSRSNISFVRLD 897 Query: 94 ----LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I+++ E I +L + G G+NL + WW+ + Sbjct: 898 GTLNQQQREKVIKQFSEESNILVLLMSLKAGGVGINLTA-ASNAFVLDPWWNPA-----V 951 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 E V R + G + V + I + T++E +L K + L Sbjct: 952 EEQAVMRIHRIGQTKRVMIKRFIVKGTVEERMLAVQARKQRMISGAL 998 >gi|198453636|ref|XP_001359276.2| GA18064 [Drosophila pseudoobscura pseudoobscura] gi|198132447|gb|EAL28421.2| GA18064 [Drosophila pseudoobscura pseudoobscura] Length = 1958 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 67/219 (30%), Gaps = 45/219 (20%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEV----------------HDEKIKALEVIIE 64 + + N + H K+ AL+ ++ Sbjct: 1676 NKTHIFQALRYLQNVCNHPKLVLRQSEELSHVSAQLALSNSCLDDIEHSAKLPALKQLLL 1735 Query: 65 KA---------NAAPIIVAYHFNSDLARLQK-------------AFPQGRTLDKDPCTIQ 102 + ++ + L ++ + + Sbjct: 1736 DCGIGVQTESVSQHRALIFCQLKAMLDIVEHDLLRRHLPSVTYLRLDGSVPASQRQDIVN 1795 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +N + I +L G GLNL G + ++F W+ M + + R + G Sbjct: 1796 NFNSDPSIDVLLLTTLVGGLGLNLT-GADTVIFVEHDWNP-----MKDLQAMDRAHRIGQ 1849 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 K+ V VY LI +N+++E ++ + K + +++A Sbjct: 1850 KKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSAENA 1888 >gi|312384392|gb|EFR29129.1| hypothetical protein AND_02166 [Anopheles darlingi] Length = 2232 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 68/201 (33%), Gaps = 20/201 (9%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANG-------AVYYDEEKHWKEVHDEKIKALEV 61 RE + E++ N + L+ N + + E KI + Sbjct: 1124 REYLGEADLESLVPSNKLWIMFEILKQCNDRGEKCLIFSAFVAVLNVVEHFMAKINEQQN 1183 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--DPCTIQEWNEGK---IPLLFAHP 116 A F + + +K I+ +N+ + + Sbjct: 1184 --HDLPHADAFGYSAFKGPWVAGKDYYRLDGKTNKSIRHDLIRSFNDPRNTRVKCFLISA 1241 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NL N ++ W+ QQ I RI + G KR +VY L+A T+ Sbjct: 1242 KAGGQGINLTA-ANRVIILDTSWNPSNDQQNIFRI-----FRLGQKRKCYVYRLLAMGTM 1295 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E V R TK + +++ Sbjct: 1296 EEKVYSRSVTKQALSFRVVDE 1316 >gi|145522560|ref|XP_001447124.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414624|emb|CAK79727.1| unnamed protein product [Paramecium tetraurelia] Length = 1013 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 70/196 (35%), Gaps = 28/196 (14%) Query: 26 ASKTVKCLQLANGAVYYDEE--------KHWKEVHDEKIKALEVIIEK--ANAAPIIVAY 75 +K ++ ++ + + K++ L+ ++K I++ Sbjct: 411 MNKLMQLRKICLHPYLFPDVEDKSLPALGEHLVDVSGKMRVLDKFLKKLSEGQHQILIFS 470 Query: 76 HFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGL 123 F S L L+ + + I E+ + + G G+ Sbjct: 471 QFTSMLNILEDYCNFRGFLYCRIDGETEIQQRDDQIAEFTSPNSKKFIFLLSTRAGGLGI 530 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ + ++ + ++ + R + G K V VY + ++T++E +++R Sbjct: 531 NL-ATADTVIIYDSDFNPQ-----MDMQAMDRAHRIGQKNRVMVYRMACEHTVEEKIIER 584 Query: 184 LRTKSTIQDLLLNALK 199 + K L++ + Sbjct: 585 QQIKLRWDSLMIQQGR 600 >gi|209945932|gb|ACI97197.1| okra [Drosophila yakuba] Length = 168 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIER 150 ++ K + +N+ + +S G L G N L F W+ + Sbjct: 76 MSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DE 130 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + R + G K+ ++Y ++A +I+E +LQR K Sbjct: 131 QAMARVWRDGQKKPCYIYRMVASGSIEEKILQRQTHKK 168 >gi|147790062|emb|CAN75984.1| hypothetical protein VITISV_012188 [Vitis vinifera] Length = 399 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 64/159 (40%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K + L+ ++ K +++ + L+ ++ Sbjct: 5 SGKFELLDRLLPKLQKAGHRVLLFSQMTRLMDILEIYLQMNEIKYLRLDGSTKTEERGTK 64 Query: 101 IQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++++N P + G GLNLQ + ++ F W+ + +++ R + Sbjct: 65 LKQFNAPDSPYFMFLLSTRAGGLGLNLQT-ADTVIIFDSDWNPQ-----MDQQAEDRAHR 118 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ V V+ L++ +I+E++L+R + K I ++ A Sbjct: 119 IGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 157 >gi|238880563|gb|EEQ44201.1| conserved hypothetical protein [Candida albicans WO-1] Length = 864 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 68/189 (35%), Gaps = 26/189 (13%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEV----HDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 K ++ + N Y + + K + L ++ ++ +++ F L Sbjct: 581 KMIQLRNICNSPFIYYNYPILDQAEVIRNSAKFQVLNQLLPPLLSSGHKVLIFAQFTKVL 640 Query: 82 ARLQKAFPQGR--------------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 L+ + +D Q N K + + G G+NL Sbjct: 641 DLLEDWLEESPLLHGKICRLDGSTNHQIRDEQISQFNNNPKFKVFLLSTRAGGLGINLVA 700 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ W+ + ++ + R + G V ++ + +++I+E+++ R +K Sbjct: 701 -ADTVILMDNDWNPQ-----MDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVLISRSGSK 754 Query: 188 STIQDLLLN 196 ++ L++ Sbjct: 755 RFLERLVIQ 763 >gi|316972508|gb|EFV56185.1| domain protein, SNF2 family [Trichinella spiralis] Length = 1052 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 34/250 (13%), Positives = 67/250 (26%), Gaps = 71/250 (28%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE---------------- 60 + ++ Q E + ++ + Sbjct: 772 SGEKQRMQIIVMLLRLRQACCHFALTKEAVDIDALCMDREEHDLSERLQEMSLVDEFPDV 831 Query: 61 -VIIEKAN----AAPIIVAYHFNSD----------------------------------- 80 II + N + F S Sbjct: 832 SDIIGEQNTEKTGVRELFENSFVSTKVKFVMEKIEFLRKSTTTPRNKFVIVSQWVKLLDI 891 Query: 81 -------LARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNI 131 G ++ + ++N + ++ + G GLNL GGN Sbjct: 892 LSVHLKKRGISFTCICGGLKNEERGERMAKFNRIDSDPEVMLLSLTAGGVGLNLT-GGNH 950 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L L W+ + Q +RI + G R V +Y + TI+E VL+ K + Sbjct: 951 LFLMDLHWNPAQELQASDRI-----NRIGQTRDVVIYKTVCSGTIEEKVLKLQEEKLALA 1005 Query: 192 DLLLNALKKE 201 + +L+ + ++ Sbjct: 1006 ESVLSGVARQ 1015 >gi|195119131|ref|XP_002004085.1| GI19521 [Drosophila mojavensis] gi|193914660|gb|EDW13527.1| GI19521 [Drosophila mojavensis] Length = 1865 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 97 DPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I+ +N + + + G G+NL G N ++ W+ QQ I RI Sbjct: 289 RHEMIKRFNSEANRRARVFLISAKAGGQGINLT-GANRVIILDTSWNPSNDQQNIFRI-- 345 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ ++Y LIA T++E V R TK + +++ Sbjct: 346 ---FRLGQKKNCYIYRLIAMGTMEEKVYSRSVTKQAMSFRVVDE 386 >gi|145522063|ref|XP_001446881.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414370|emb|CAK79484.1| unnamed protein product [Paramecium tetraurelia] Length = 987 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 73/196 (37%), Gaps = 28/196 (14%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH--------DEKIKALEVIIEKANA--APIIVAY 75 +K ++ ++ + E + K++ L++ ++K + +++ Sbjct: 399 MNKLMQLRKICLHPYLFPEVEDKSLPPLGEHLVEVAGKMRVLDIFLKKLSDGTHQVLIFS 458 Query: 76 HFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNEGKIP--LLFAHPASCGHGL 123 F L L+ + + I E+ + + + G G+ Sbjct: 459 QFTMMLNILEDYCNYRKYDYCRIDGETEIQQRDDQIAEFTKPDSKKFIFLLSTRAGGLGI 518 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ + ++ + ++ + R + G K V VY + ++TI+E +++R Sbjct: 519 NL-ATADTVIIYDSDFNPQ-----MDMQAMDRAHRIGQKNRVMVYRMACEHTIEEKIIER 572 Query: 184 LRTKSTIQDLLLNALK 199 + K L++ + Sbjct: 573 QQIKLRWDSLMIQQGR 588 >gi|116192043|ref|XP_001221834.1| hypothetical protein CHGG_05739 [Chaetomium globosum CBS 148.51] gi|88181652|gb|EAQ89120.1| hypothetical protein CHGG_05739 [Chaetomium globosum CBS 148.51] Length = 487 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 8/125 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVF 134 F + + E+N P + G GLNLQ + ++ Sbjct: 7 FLRFRGITYLRLDGTTKSEDRSDLLYEFNRPDSPYFMFLLSTRAGGLGLNLQT-ADTVII 65 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + + R + G K V + LI+ +++E +L+R R K + + Sbjct: 66 YDSDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLISSASVEEKILERARYKLDMDGKV 120 Query: 195 LNALK 199 + A + Sbjct: 121 IQAGR 125 >gi|302678131|ref|XP_003028748.1| hypothetical protein SCHCODRAFT_112243 [Schizophyllum commune H4-8] gi|300102437|gb|EFI93845.1| hypothetical protein SCHCODRAFT_112243 [Schizophyllum commune H4-8] Length = 1327 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 59/169 (34%), Gaps = 21/169 (12%) Query: 50 EVHDEKIKALEV----IIEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLD 95 + K+K + + ++ +I+ + S+ + + + Sbjct: 1140 FLPSTKMKYMMEALERLFKEKPDEKVILVSQWTTALSLLSDYLSERHIAHVKYQGDMSRN 1199 Query: 96 KDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + K ++ G GLNL N ++ L W + +E Sbjct: 1200 ARDAAVRAFMAKDKAKVMLMSLKCGGVGLNLTR-ANNVISLDLGWS-----EAVEAQAFD 1253 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G R V V L+ NT+++ +L K+ + D L K + I Sbjct: 1254 RVHRLGQTRKVRVERLVIDNTVEDRILGLQERKALLADGALGEGKGKKI 1302 >gi|170095703|ref|XP_001879072.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164646376|gb|EDR10622.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 830 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 22/186 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK-----ANAAPIIVAYHFNSDLARLQKA--- 87 +E + K + + ++ I+ F S L ++ Sbjct: 629 CVPLAIQAKEAEEERPSSAKTRMILKLLNDIDERSDCEEKTIIFSQFTSMLDLIEPFLSE 688 Query: 88 -------FPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + + ++ + K ++ + GLNL N ++ LWW Sbjct: 689 EGVKYVRYDGSMSAKEREVSLAKIKSSKSTRVILISFKAGSTGLNLTA-CNNVILVDLWW 747 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + E R + G R V ++ L NT+++ +L K + L+ K Sbjct: 748 NPAL-----EDQAFDRAHRFGQTRDVNIFKLKIDNTVEDRILALQDKKRQLAQAALSGDK 802 Query: 200 KETIHV 205 + + + Sbjct: 803 IKNMRL 808 >gi|218457856|ref|YP_002418861.1| hypothetical protein PPSN_gp55 [Pseudomonas phage SN] gi|218379124|emb|CAT99710.1| hypothetical protein [Pseudomonas phage SN] gi|294663794|gb|ADF29348.1| putative helicase [Pseudomonas phage JG024] Length = 519 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 86/215 (40%), Gaps = 24/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIE---AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + + LQ E+ +F++A+ K Q+A+G + E D Sbjct: 300 KVYQRVEEDYHFVLQNEDFMLDVSFDAAAARSKLKQVASGYINVYGEPVILPPEDNPRFA 359 Query: 55 -KIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQE 103 LE ++E+ IIV ++ +++ + + I + Sbjct: 360 VFTDLLEGLLEEDPERSIIVWAMRIQEIDQIKAYLEAQGISFGTYYGETKEAEREKLIDD 419 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + ++ + +PA+ G G+ L ++ ++++ D E Q +R + G Sbjct: 420 FQAKRVQVFLGNPAAAGIGITLTA-ADVAIYYTTDEDNELRMQSEDR-----NHRIGTVN 473 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +V + LI ++IDE + L K + +++ + Sbjct: 474 SVLYFDLICLDSIDEKIQVSLEWKRNLASYVVDGV 508 >gi|294462184|gb|ADE76644.1| unknown [Picea sitchensis] Length = 407 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 8/123 (6%) Query: 74 AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNI 131 + ++ K +Q +N+ + G GLNL GGN Sbjct: 32 FAQICRERNYPFLRLDGTTSIGKRRKLVQRFNDPSQNEFAFLLSSKAGGCGLNL-IGGNR 90 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 LV F W+ ++ R + G K+ V++Y + TI+E V QR +K +Q Sbjct: 91 LVLFDPDWNPAN-----DKQAAARVWRDGQKKRVYIYRFLTTGTIEEKVYQRQMSKEGLQ 145 Query: 192 DLL 194 ++ Sbjct: 146 KVV 148 >gi|71028038|ref|XP_763662.1| ATP-dependant helicase [Theileria parva strain Muguga] gi|68350616|gb|EAN31379.1| ATP-dependant helicase, putative [Theileria parva] Length = 969 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 21/163 (12%) Query: 49 KEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAF------------PQGRTL 94 + V K+ II K I++ + L + + T+ Sbjct: 642 ESVGSSKLNVSLKIIEMWKKENKKILLFTQTITMLNIIYEHLLETYEKDEILVLYGKHTV 701 Query: 95 DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I+++ N+ K+ L+ G GLNL ++ + W+ Sbjct: 702 KNRNKIIEQFSNDDKVFLMILTTKVGGIGLNLTA-ATRIIIYDPDWNPMTDM-----QAK 755 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K V +Y LI +TI+E + QR K + +L+ Sbjct: 756 ERCYRIGQKNEVIIYRLITASTIEEKIYQRQLYKYYLSQQILS 798 >gi|159126292|gb|EDP51408.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163] Length = 975 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 20/154 (12%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KD 97 KI+AL I+ +A +V + S L ++ + +D Sbjct: 802 PSSKIEALIKILTAQGQAPDTKTVVFSQWTSFLTLVEPHLQRHGIGYARIDGSMKSTARD 861 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T + + + +L A + C GLNL N + WW IE V R Sbjct: 862 ASTYKFSKDPQCKVLLASLSVCSVGLNLVA-ANQAILADSWWAPA-----IEDQAVDRVY 915 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G KR V+ L+ +NTI++ VL+ TK + Sbjct: 916 RLGQKRETTVWRLVMENTIEDRVLEIQDTKRKLM 949 >gi|168048890|ref|XP_001776898.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162671754|gb|EDQ58301.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1122 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 65/231 (28%), Gaps = 64/231 (27%) Query: 22 AFNSASKTVKCLQLANGAVY--------------------------YDEEKHWKEV---- 51 + S +L + + + EV Sbjct: 809 SATILSSITSLRKLCSHPQLSYNDIIEGTNLDAELKSQIIAAGLSRFSDSTDNIEVLQSR 868 Query: 52 ---------HDEKIKALEVIIEK-------ANAAPIIVAYHFNSDLARLQKAFPQ----- 90 K+ L ++ ++V +F L +Q Sbjct: 869 ASLSDEGWKFSGKLACLYWLLRTVYTSRTARQKDRVVVVSNFTRTLDLIQDMCTSQGWNW 928 Query: 91 -----GRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 K + + N G + + + G GLNL G N LV F W+ Sbjct: 929 LRLDGSTEASKRQLLVDQLNSGVGDVFVFLLSSKAGGTGLNL-IGANRLVLFDPDWNPAT 987 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q I RI + G + V +Y L++ +I+E + QR K + + Sbjct: 988 DSQAIARIW-----REGQLKPVLIYRLLSTGSIEEKIYQRQIMKGGMSAAV 1033 >gi|151946506|gb|EDN64728.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789] Length = 790 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 17/142 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IV F S L ++ + +D N + + + Sbjct: 639 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKA 698 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 699 GGVALNL-CEASQVFILDPWWNPSVEWQSGDRV-----HRIGQYRPVKITRFCIEDSIEA 752 Query: 179 LVLQRLRTKSTIQDLLLNALKK 200 +++ K+ + +N + Sbjct: 753 RIIELQEKKANMIHATINQDEA 774 >gi|303318791|ref|XP_003069395.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240109081|gb|EER27250.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 956 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 20/156 (12%) Query: 50 EVHDEKIKALEVIIE---KANAAPIIVAYHFNSDL-----ARLQKAFPQGRTLDKDPCTI 101 E KI+AL I+ +A + +V + S L ++ R K T Sbjct: 780 EESSSKIQALIKILTAQGQAPGSKTVVFSQWTSFLDLIEPQLVKHNITFTRIDGKRSSTK 839 Query: 102 QE------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ N+ ++ A C GLNL N ++ WW IE V R Sbjct: 840 RDVAMATLTNDPNCTVMLASLNVCSVGLNLVA-ANQVILTDSWWAPA-----IEDQAVDR 893 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G KR V+ L+ + +I++ VL + K + Sbjct: 894 VYRLGQKRPTTVWRLVMEGSIEDRVLDIQKRKRDLM 929 >gi|195342147|ref|XP_002037663.1| GM18179 [Drosophila sechellia] gi|194132513|gb|EDW54081.1| GM18179 [Drosophila sechellia] Length = 994 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 41/104 (39%), Gaps = 8/104 (7%) Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + ++ F W+ + + Sbjct: 2 RRQALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQA 55 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K V +Y L+ +++E +++R + K + L++ + Sbjct: 56 RAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 99 >gi|268534396|ref|XP_002632329.1| Hypothetical protein CBG00336 [Caenorhabditis briggsae] Length = 753 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 9/107 (8%) Query: 95 DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +N+ + + G GLNL G + LV F W+ QQ + RI Sbjct: 488 QDRQKLVRNFNDQRDPSNIFLLSTKAGGVGLNL-IGASRLVLFDSDWNPANDQQAMARIW 546 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R +Y LI TI+E +LQR K+ + +++A++ Sbjct: 547 -----RDGQVRPCHIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIE 587 >gi|70998504|ref|XP_753974.1| SNF2 family helicase [Aspergillus fumigatus Af293] gi|66851610|gb|EAL91936.1| SNF2 family helicase, putative [Aspergillus fumigatus Af293] Length = 975 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 20/154 (12%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KD 97 KI+AL I+ +A +V + S L ++ + +D Sbjct: 802 PSSKIEALIKILTAQGQAPDTKTVVFSQWTSFLTLVEPHLQRHGIGYARIDGSMKSTARD 861 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T + + + +L A + C GLNL N + WW IE V R Sbjct: 862 ASTYKFSKDPQCKVLLASLSVCSVGLNLVA-ANQAILADSWWAPA-----IEDQAVDRVY 915 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G KR V+ L+ +NTI++ VL+ TK + Sbjct: 916 RLGQKRETTVWRLVMENTIEDRVLEIQDTKRKLM 949 >gi|14195095|sp|P79051|RHP16_SCHPO RecName: Full=ATP-dependent helicase rhp16; AltName: Full=DNA repair protein rhp16; AltName: Full=RAD16 homolog Length = 861 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 17/147 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPAS 118 IV F S L + + G T TI+ + N+ I + + Sbjct: 710 KSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSNDINITIFLVSLKA 769 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q ++RI + G KR + V L +N+I+ Sbjct: 770 GGVALNLTE-ASQVFMMDPWWNGAVQWQAMDRI-----HRIGQKRPIKVITLCIENSIES 823 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 +++ K+ + ++ +K + Sbjct: 824 KIIELQEKKAQMIHATIDQDEKALNQL 850 >gi|320034534|gb|EFW16478.1| helicase SWR1 [Coccidioides posadasii str. Silveira] Length = 957 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 20/156 (12%) Query: 50 EVHDEKIKALEVIIE---KANAAPIIVAYHFNSDL-----ARLQKAFPQGRTLDKDPCTI 101 E KI+AL I+ +A + +V + S L ++ R K T Sbjct: 781 EESSSKIQALIKILTAQGQAPGSKTVVFSQWTSFLDLIEPQLVKHNITFTRIDGKRSSTK 840 Query: 102 QE------WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ N+ ++ A C GLNL N ++ WW IE V R Sbjct: 841 RDVAMATLTNDPNCTVMLASLNVCSVGLNLVA-ANQVILTDSWWAPA-----IEDQAVDR 894 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G KR V+ L+ + +I++ VL + K + Sbjct: 895 VYRLGQKRPTTVWRLVMEGSIEDRVLDIQKRKRDLM 930 >gi|255550546|ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis] gi|223544553|gb|EEF46070.1| ATP binding protein, putative [Ricinus communis] Length = 1109 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 68/209 (32%), Gaps = 25/209 (11%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEVIIE 64 +R L+G + + A K A E+ ++E H KI + +++ Sbjct: 710 KRAAEDVLEGMDFISPEDAGLAEKL---ALHVADVAEKAEFQEKHDNISCKISFIMSLLD 766 Query: 65 K--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK-IPL 111 +++ L +Q + ++ EG P+ Sbjct: 767 NLIPEGHNVLIFSQSRKMLNLIQDSLASNGYEFLRIDGTTKASDRVKIVNDFQEGVGAPI 826 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 G GL L + ++ W+ Q ++R + G ++ V VY L+ Sbjct: 827 FLLTSQVGGLGLTLTK-ADRVIVVDPAWNPSTDNQSVDR-----AYRIGQRKDVLVYRLM 880 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKK 200 T++E + ++ K + ++ Sbjct: 881 TCGTVEEKIYRKQIFKGGLFKTATEHKEQ 909 >gi|218194432|gb|EEC76859.1| hypothetical protein OsI_15041 [Oryza sativa Indica Group] Length = 1138 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 65/177 (36%), Gaps = 19/177 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR------- 92 + + K+ L I+E + IV F S L+ F Q Sbjct: 960 FQVDPENNWKDSCKVIKLIKILEGLQEKREKSIVFSQFTSFFDLLEVPFNQKGIKFLRFD 1019 Query: 93 ---TLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++E++E K +L + G GLNL + + WW+ +Q I Sbjct: 1020 GKLSQKHREKVLKEFSESKDKLVLLMSLKAGGVGLNLTA-ASNVFLMDPWWNPAVEEQAI 1078 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RI + G KRAV V I ++T++E + + K + L + + + Sbjct: 1079 MRI-----HRIGQKRAVQVRRFIVKDTVEERMQKVQACKQRMISGALTDDEVRSARI 1130 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 45/209 (21%), Gaps = 46/209 (22%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y R N ++ Q + + K Sbjct: 804 YEALFRRSKVQFDKFVAQGSVLNNYANILELLLRLRQCCDHPFLVISRADTQ-----KYT 858 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 L+ + A F + R + ++E +G Sbjct: 859 DLDEL-----------AQRFLDGVQRDSARRSAPPSQAYVEEVVEEIRQGATTECPICLE 907 Query: 118 SCGHGLNLQYGGNIL---VFFSLWWDLEEHQQMIER--------IGVTRQRQAGF----- 161 S L + + S W + R I + Q + Sbjct: 908 SASDDPVLTPCAHRMCRECLLSSWRTPSGGPCPLCRSPITKSELITLPSQCRFQVDPENN 967 Query: 162 -KRAVFVYYLIAQNTIDELVLQRLRTKST 189 K + V LI +L+ L+ K Sbjct: 968 WKDSCKVIKLI-------KILEGLQEKRE 989 >gi|58531994|emb|CAE04094.3| OSJNBa0096F01.3 [Oryza sativa Japonica Group] Length = 1132 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 65/177 (36%), Gaps = 19/177 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR------- 92 + + K+ L I+E + IV F S L+ F Q Sbjct: 954 FQVDPENNWKDSCKVIKLIKILEGLQEKREKSIVFSQFTSFFDLLEVPFNQKGIKFLRFD 1013 Query: 93 ---TLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++E++E K +L + G GLNL + + WW+ +Q I Sbjct: 1014 GKLSQKHREKVLKEFSESKDKLVLLMSLKAGGVGLNLTA-ASNVFLMDPWWNPAVEEQAI 1072 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RI + G KRAV V I ++T++E + + K + L + + + Sbjct: 1073 MRI-----HRIGQKRAVQVRRFIVKDTVEERMQKVQACKQRMISGALTDDEVRSARI 1124 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 45/209 (21%), Gaps = 46/209 (22%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y R N ++ Q + + K Sbjct: 798 YEALFRRSKVQFDKFVAQGSVLNNYANILELLLRLRQCCDHPFLVISRADTQ-----KYT 852 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 L+ + A F + R + ++E +G Sbjct: 853 DLDEL-----------AQRFLDGVQRDSARRSAPPSQAYVEEVVEEIRQGATTECPICLE 901 Query: 118 SCGHGLNLQYGGNIL---VFFSLWWDLEEHQQMIER--------IGVTRQRQAGF----- 161 S L + + S W + R I + Q + Sbjct: 902 SASDDPVLTPCAHRMCRECLLSSWRTPSGGPCPLCRSPITKSELITLPSQCRFQVDPENN 961 Query: 162 -KRAVFVYYLIAQNTIDELVLQRLRTKST 189 K + V LI +L+ L+ K Sbjct: 962 WKDSCKVIKLI-------KILEGLQEKRE 983 >gi|50292251|ref|XP_448558.1| hypothetical protein [Candida glabrata CBS 138] gi|49527870|emb|CAG61521.1| unnamed protein product [Candida glabrata] Length = 830 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 17/147 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG-KIPLLFAHPAS 118 IV F S L ++ + + + TI+ + + + + + Sbjct: 679 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDQTIKYFMDNIECEVFLVSLKA 738 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 739 GGVALNL-CEASQVFILDPWWNPSVEWQSGDRV-----HRIGQYRPVKITRFCIEDSIEA 792 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 +++ K+ + +N + + Sbjct: 793 RIIELQEKKANMIHATINQDEAAINRL 819 >gi|28972640|dbj|BAC65736.1| mKIAA1122 protein [Mus musculus] gi|148666357|gb|EDK98773.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1`, isoform CRA_c [Mus musculus] Length = 1071 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 23/195 (11%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAP 70 + + K Q + + + K +AL I+ + Sbjct: 862 LIFEDMEVMTDFELHVLCKQYQ----HINSYQLDMDLILDSGKFRALGCILSELKQKGDR 917 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASC 119 +++ F L L+ + + I E+N + I + + Sbjct: 918 VVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAG 977 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL N+++ + + ++ R + G + V V LI+Q TI+E Sbjct: 978 GLGINLTS-ANVVILHDIDCNP-----YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEES 1031 Query: 180 VLQRLRTKSTIQDLL 194 +L+ + K ++ + Sbjct: 1032 MLKINQQKLKLEQDM 1046 >gi|294942448|ref|XP_002783529.1| DNA repair protein rad54, putative [Perkinsus marinus ATCC 50983] gi|239896026|gb|EER15325.1| DNA repair protein rad54, putative [Perkinsus marinus ATCC 50983] Length = 682 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 58/172 (33%), Gaps = 20/172 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK----------- 86 ++ E K++ L ++ K N +++ + S L +Q Sbjct: 512 ALPQDDGRKIEALSSKLQVLHCLLRRLKENGHRVLLFCPWTSMLDLVQYTILRTDGMSCL 571 Query: 87 -AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + D+ + N K GL L + +V S W+ + Sbjct: 572 RIDGSTPSSDRQRKIRKFQNSKKYFAFVLSTRCGHVGLTLTA-ADRVVLISPSWNPSD-- 628 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V R + G +R V Y L+ TI+E + QR TK ++L Sbjct: 629 ---DDQAVARAYRIGQRRDVIAYRLVCSGTIEERIFQREVTKIGDSKVILED 677 >gi|224089945|ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222854852|gb|EEE92399.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 799 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 19/145 (13%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP---L 111 + A +V F L L++ + K I+++ + Sbjct: 640 ENPARKSVVFSQFQKMLVLLEEPLKEAGFKILRLDGSMNAKKRAQVIKQFGVPGPDGPTV 699 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L A + G G+NL + + WW+ +E + R + G + V V LI Sbjct: 700 LLASLKASGAGINL-AVASRVYLLEPWWNPA-----VEEQAMDRVHRIGQEEDVTVVRLI 753 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 AQ++I+E +L+ K + Sbjct: 754 AQSSIEERILEMQERKKKLAKEAFG 778 >gi|256081844|ref|XP_002577177.1| transcriptional regulator atrx homolog (X-linked nuclear protein-1) [Schistosoma mansoni] gi|238662474|emb|CAZ33414.1| transcriptional regulator atrx homolog (X-linked nuclear protein-1), putative [Schistosoma mansoni] Length = 1673 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 58/149 (38%), Gaps = 11/149 (7%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR--LQKAFPQGRTLDKDPCTIQEWN---EGKIP 110 + +E + + N + ++ R + ++ +N ++ Sbjct: 1370 LDLVERFLAEINHLSAYFSDIGHNTWIRGLDYERMDGSMNVNVRKDLQTRFNSTSNTRLR 1429 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL N L+ W+ + + R + G + V++Y L Sbjct: 1430 LFIISTKAGGLGINLVS-ANRLILLDASWNPSH-----DIQSIFRSYRFGQSKPVYIYRL 1483 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 IA+ TI+E + R TK ++ +++ L+ Sbjct: 1484 IAKGTIEEKIYDRQVTKQSLSLRVIDELQ 1512 >gi|170092931|ref|XP_001877687.1| DNA repair protein, SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164647546|gb|EDR11790.1| DNA repair protein, SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1051 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 59/185 (31%), Gaps = 36/185 (19%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN 105 + L II ++ H+ S L L+ + K + +N Sbjct: 726 LAKLLTIIRHTTEEKCVLVSHYTSTLNILEAFCQKKGYSYYRLDGQTPQVKRQEYVNAFN 785 Query: 106 EGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDL-----------EEHQQMIERI 151 + + G G+NL G + L W+ + Sbjct: 786 NVSQRSSFIFLLSSKAGGLGINL-IGASRLCLIDSDWNPRLVGRRTQLTPTLISDSHDLQ 844 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL-----------NALKK 200 + R + G KR VF+Y + IDE + QR TK + L+ ++ + Sbjct: 845 SMARCHRDGQKRPVFIYRFLTTGAIDEKIYQRQVTKLGLSASLIGSAGSSSASKTDSFSR 904 Query: 201 ETIHV 205 + +H+ Sbjct: 905 KEVHI 909 >gi|307111435|gb|EFN59669.1| hypothetical protein CHLNCDRAFT_49470 [Chlorella variabilis] Length = 1117 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 20/159 (12%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA---------RLQKAF 88 +E K + +++ ++ L + + Sbjct: 645 RLLEEVHTTGFAASCKTVFVMALLKNLVGEGHRTLIFSQSRVMLNILESAIKEEQWRYCR 704 Query: 89 PQGRTLD--KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G + ++++ IP+ G GL L + ++ W+ Sbjct: 705 IDGSVASAAEREARVRQFQTSHTIPIFLLTSQVGGLGLTLTA-ADRVIILDPAWNPSTDN 763 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 Q ++R + G KR V VY LI+ T++E + +R Sbjct: 764 QSVDR-----AYRIGQKRDVVVYRLISCGTVEENIYRRQ 797 >gi|71991518|ref|NP_510607.2| human CSB (Cockayne Syndrome B) homolog family member (csb-1) [Caenorhabditis elegans] gi|30145715|emb|CAB03135.2| C. elegans protein F53H4.1, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 957 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 57/202 (28%), Gaps = 25/202 (12%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKANA 68 + + + N Y K++ + + Sbjct: 476 QVNEIIERRLKAFVGINHLTNICNHPGIYRSLSPASPKFGSIKDSGKVEMTFKLFDDWFK 535 Query: 69 APIIVAYHFNSDLARLQKAFPQ-------------GRTLDKDPCTIQEWNEG-KIPLLFA 114 +P F + + P I+++ + I + Sbjct: 536 SPTNRVILFTQRRTVITMMEYFLAEKGIKCVSLTGADSAAARPKIIKKFEDDVSIKVFLM 595 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL N ++ F W+ + + R + G V +Y L++ Sbjct: 596 TTRAGGLGLNLT-CANKVIIFDPDWNPQA-----DNQAKNRIYRMGQTNDVAIYRLVSNG 649 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 TI++L + K + LL+ Sbjct: 650 TIEDLKFFKQVQKENLAARLLH 671 >gi|255076351|ref|XP_002501850.1| SNF2 super family [Micromonas sp. RCC299] gi|226517114|gb|ACO63108.1| SNF2 super family [Micromonas sp. RCC299] Length = 1989 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 49/154 (31%), Gaps = 19/154 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCT 100 K L ++ ++ +V + L D+ Sbjct: 785 SGKCAFLMSLLRHLASSGHRTLVFSQSRAMLDVLESAARADGHDLVRIDGKVPADERHAR 844 Query: 101 IQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++ + IPL G GL L + +V + W+ Q ++R + Sbjct: 845 VERFQSTPSIPLALLTSQVGGLGLTLTA-ADRVVIYDPAWNPAADSQSVDR-----AYRI 898 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 G + V VY L+ T++E V +R K + Sbjct: 899 GQTKDVVVYRLVTCGTVEEKVYRRQVFKGGLSRA 932 >gi|6319590|ref|NP_009672.1| Rad16p [Saccharomyces cerevisiae S288c] gi|400920|sp|P31244|RAD16_YEAST RecName: Full=DNA repair protein RAD16; AltName: Full=ATP-dependent helicase RAD16 gi|3551|emb|CAA46974.1| excision repair protein [Saccharomyces cerevisiae] gi|476069|emb|CAA55616.1| UV damage repair protein [Saccharomyces cerevisiae] gi|487900|gb|AAA34931.1| RAD16 [Saccharomyces cerevisiae] gi|536453|emb|CAA85071.1| RAD16 [Saccharomyces cerevisiae] gi|285810448|tpg|DAA07233.1| TPA: Rad16p [Saccharomyces cerevisiae S288c] Length = 790 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 17/142 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IV F S L ++ + +D N + + + Sbjct: 639 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKA 698 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 699 GGVALNL-CEASQVFILDPWWNPSVEWQSGDRV-----HRIGQYRPVKITRFCIEDSIEA 752 Query: 179 LVLQRLRTKSTIQDLLLNALKK 200 +++ K+ + +N + Sbjct: 753 RIIELQEKKANMIHATINQDEA 774 >gi|148807359|gb|ABR13433.1| putative DNA helicase [Pseudomonas aeruginosa] Length = 657 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 25/207 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQ------LANGAVYYDEEKHWKEVHDEKIKALEV 61 ++++ L+G+ + + + + Q L + V+ + + K++ Sbjct: 441 RKDVLPSLKGKQRQLLKV-ALSTEERQQYDVLRLEDRPVFARLGALRRYLETVKVRVAMD 499 Query: 62 IIEK-ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKI 109 ++ + +I+ F +A L++ Q +L K I + + Sbjct: 500 LLSELDAEDKVILFCEFKPTVAALKELCEQAGLGCVTLVGNDSLTKRQKAIDRFQQDPDC 559 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G NL N + F L W + + R + G R V V Sbjct: 560 RVFICTTAAAGTGNNLTA-ANYVFFLGLPWTPGQQE-----QAEDRAYRNGQLRMVVVKI 613 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + TIDE + Q L K + L+ Sbjct: 614 PLVEGTIDEQLWQLLNAKRQVAQDLIE 640 >gi|152984418|ref|YP_001349818.1| SNF2 family helicase [Pseudomonas aeruginosa PA7] gi|150959576|gb|ABR81601.1| helicase, SNF2 family [Pseudomonas aeruginosa PA7] Length = 658 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 25/207 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQ------LANGAVYYDEEKHWKEVHDEKIKALEV 61 ++++ L+G+ + + + + Q L + V+ + + K++ Sbjct: 441 RKDVLPSLKGKQRQLLKV-ALSTEERQQYDVLRLEDRPVFARLGALRRYLETVKVRVAMD 499 Query: 62 IIEK-ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKI 109 ++ + +I+ F +A L++ Q +L K I + + Sbjct: 500 LLSELDAEDKVILFCEFKPTVAALKELCEQAGHGCVTLVGNDSLTKRQKAIDRFQQDPDC 559 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G NL N + F L W + + R + G R V V Sbjct: 560 RVFICTTAAAGTGNNLTA-ANYVFFLGLPWTPGQQE-----QAEDRAYRNGQLRMVVVKI 613 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + TIDE + Q L K + L+ Sbjct: 614 PLVEGTIDEQLWQLLNAKRQVAQDLIE 640 >gi|310796849|gb|EFQ32310.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1069 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 62/208 (29%), Gaps = 26/208 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLAN---GAVYYDEEKHWKEVHDEKIK---- 57 K L + + + + ++ LQ Y + + + Sbjct: 509 QKLSNHLTLLIPAGGGDQDDKYKREIRALQTCCPETWQYLYQNRDAILNLANPEFCGKWK 568 Query: 58 --ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 + + ++V H L LQ F + + + ++N Sbjct: 569 VLKKLLKFWHDSGDKVLVFSHSVRLLRILQHLFHNTSYSVTYLDGSVSYEDRQKAVDDFN 628 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G GLN+ N +V W+ + R + G R Sbjct: 629 SDPTQFVFLISTKAGGVGLNITS-ANKVVIVDPHWNPS-----YDLQAQDRAYRIGQVRD 682 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V V+ L++ TI+E+V R K + Sbjct: 683 VDVFRLVSTGTIEEIVYARQIYKQQQAN 710 >gi|302813768|ref|XP_002988569.1| hypothetical protein SELMODRAFT_128228 [Selaginella moellendorffii] gi|300143676|gb|EFJ10365.1| hypothetical protein SELMODRAFT_128228 [Selaginella moellendorffii] Length = 601 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 64/190 (33%), Gaps = 31/190 (16%) Query: 30 VKCLQLANGAVYYDEEKHWKEV---------HDEKIKALEVIIE---KANAAPIIVAYHF 77 ++ + N +E + K+K L + K+ +++ Sbjct: 333 MQLRKNCNHPDLLRQEFNQDYDWPPVEQLTAECGKLKFLLDRLLPPLKSRGHRVLIFSQM 392 Query: 78 NSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 L L+ + + I EG + + G G+NL Sbjct: 393 TKMLDILEFCLGERGMPPFRLDGNVKQEDRQEQVITFSREGF--VFLLSTRAGGLGINLT 450 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + + W+ + ++ + R + G R V VY L ++++ +L+ + Sbjct: 451 S-ADTAIIYDSDWNPQ-----MDLQAMDRCHRIGQTRPVHVYRLATAHSVECRMLKVANS 504 Query: 187 KSTIQDLLLN 196 K ++ L++N Sbjct: 505 KLQLETLVIN 514 >gi|170050411|ref|XP_001861299.1| chromatin remodelling complex ATPase chain Iswi [Culex quinquefasciatus] gi|167872033|gb|EDS35416.1| chromatin remodelling complex ATPase chain Iswi [Culex quinquefasciatus] Length = 730 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 63/210 (30%), Gaps = 27/210 (12%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-------KHWKEVHDEKIKAL 59 R++ V ++ ++ L Sbjct: 385 LCRDVPLLKGDGTYVGMTMGMLFVYLREITIHPYMIPPADPDSNSLGQHLVDSCSRMIVL 444 Query: 60 EVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 + ++ + + +++ F L L+ + I E+N Sbjct: 445 DKLLTRLKARGSRVLLFSQFVLMLNILEDYLVWKGYKYSRLTGTTPQETRQKMIDEFNSP 504 Query: 108 --KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + S G G+NL + ++F+ L W+ + + R + G + V Sbjct: 505 GSETFIFMITTRSGGLGINLPT-ADTVIFYDLDWNPQA-----DFQAEDRAHRIGQLKQV 558 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V+ + T+DE V + K+ + ++ Sbjct: 559 HVFRFVILGTVDEAVYGHSQRKTQLDKAIV 588 >gi|302782409|ref|XP_002972978.1| hypothetical protein SELMODRAFT_413336 [Selaginella moellendorffii] gi|300159579|gb|EFJ26199.1| hypothetical protein SELMODRAFT_413336 [Selaginella moellendorffii] Length = 937 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 63/163 (38%), Gaps = 19/163 (11%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 + K+ AL+ ++ + +++ + L L+ ++ Sbjct: 512 NCGKMLALKNLLSKWTSQGDKVLLFSYSVRMLGILEKFLIRRGYCFCRLDGSTPMNARQG 571 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + E+N + + G GLNL N +V F W+ + + R + Sbjct: 572 IVDEFNTSPSKQVFLISTRAGGLGLNLVS-ANRVVVFDPNWNPAQ-----DLQAQDRSFR 625 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G KR V V+ L+A +++EL+ R K + +L + +++ Sbjct: 626 FGQKRHVTVFRLLAAGSLEELIYTRQIYKQQLFNLAVTGNREK 668 >gi|323349726|gb|EGA83941.1| Rad16p [Saccharomyces cerevisiae Lalvin QA23] Length = 790 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 17/142 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IV F S L ++ + +D N + + + Sbjct: 639 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKA 698 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 699 GGVALNL-CEASQVFILDPWWNPSVEWQSGDRV-----HRIGQYRPVKITRFCIEDSIEA 752 Query: 179 LVLQRLRTKSTIQDLLLNALKK 200 +++ K+ + +N + Sbjct: 753 RIIELQEKKANMIHATINQDEA 774 >gi|300708443|ref|XP_002996400.1| hypothetical protein NCER_100499 [Nosema ceranae BRL01] gi|239605700|gb|EEQ82729.1| hypothetical protein NCER_100499 [Nosema ceranae BRL01] Length = 664 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 63/159 (39%), Gaps = 24/159 (15%) Query: 64 EKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWN-EGKIPLL 112 K N IV + + L L+ +++ I+++N + I + Sbjct: 508 NKNNLEKSIVFSQYVNFLEILRWRLERAGFRCVVIYGNMPINQRKAAIEKFNTDHNITVF 567 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G LNL N + LWW+ +Q ++RI + G R + ++ +I Sbjct: 568 LISLKAGGVALNLTE-ANNVFLMDLWWNPAVEEQAMDRI-----HRIGQHRPIKIHRVII 621 Query: 173 QNTIDELVLQRLRTKSTIQD-------LLLNALKKETIH 204 +N+I+ +L+ + K + + + + +E +H Sbjct: 622 ENSIESKILELQKKKKALFESSVERNYAAVEKISEEDLH 660 >gi|255072671|ref|XP_002500010.1| SNF2 super family [Micromonas sp. RCC299] gi|226515272|gb|ACO61268.1| SNF2 super family [Micromonas sp. RCC299] Length = 800 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 19/160 (11%) Query: 48 WKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLD 95 E K+ L ++ + ++ + S L + +A + Sbjct: 644 HDEAMSGKLAVLIRMLQGMRRGIDKTVIVSGYTSTLDIIAEACLVMGGKVSRLDGSVPPN 703 Query: 96 KDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + +N G+ + + G GLNL G N LV F W+ + + Sbjct: 704 QRVPLVNSFNAGRGGDVFLLSTKAGGVGLNL-VGANRLVLFDSDWNPAN-----DLQALA 757 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G KR V +Y L++ T++E + QR K + + Sbjct: 758 RVWRDGQKRPVTIYRLVSTGTVEEKIFQRQMLKGDVASCM 797 >gi|170114883|ref|XP_001888637.1| predicted protein [Laccaria bicolor S238N-H82] gi|164636332|gb|EDR00628.1| predicted protein [Laccaria bicolor S238N-H82] Length = 163 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 56/140 (40%), Gaps = 17/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEW-NEGKIPLLFAHP 116 I+ F S L+ + A + T + ++ + + ++ Sbjct: 15 GEKTIIFSSFVSLLSLIGDALAERHTGFTSYTGALSSAQRQMALKRISQDTQCQVILISI 74 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLN+ N ++ WW+ +E ++R + G + V VY ++A+NTI Sbjct: 75 KAGGTGLNITA-CNHVIIMDPWWNP-----YVEEQAISRAHRIGQSKDVHVYRILARNTI 128 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E +++ K + L+ Sbjct: 129 EERIVEIQNKKRETIEAFLD 148 >gi|255730915|ref|XP_002550382.1| DNA repair protein RAD16 [Candida tropicalis MYA-3404] gi|240132339|gb|EER31897.1| DNA repair protein RAD16 [Candida tropicalis MYA-3404] Length = 855 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 49/147 (33%), Gaps = 17/147 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKI 109 + + IV F S L ++ + +D ++ Sbjct: 695 KLRSDKHTIKSIVFSQFTSMLDLIEWRLKRAGFQTVKLQGSMTPQQRDNTIKHFMENTEV 754 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q ++R+ + G KR + + Sbjct: 755 EVFLVSLKAGGVALNL-CEASQVFLMDPWWNPSVEWQSMDRV-----HRIGQKRPIKITR 808 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 +++I+ +++ K+ + +N Sbjct: 809 FCIEDSIESKIIELQEKKANMIHATIN 835 >gi|171680898|ref|XP_001905393.1| hypothetical protein [Podospora anserina S mat+] gi|170940407|emb|CAP65633.1| unnamed protein product [Podospora anserina S mat+] Length = 1112 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 17/150 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN 105 IK L + + +V F S L + ++E+ Sbjct: 948 IKKLRELRKGHPTIKSVVFSQFTSFLSLIEPALTQANMHFVRLDGSMSQKARAAVLEEFK 1007 Query: 106 EG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E + +L + G GLNL + WW IE + R + G + Sbjct: 1008 ESKRFTVLLLSLKAGGVGLNLT-MAKRVFMMDPWWSFA-----IEAQAIDRVHRMGQEDE 1061 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V +Y I + +++E +L+ K I L Sbjct: 1062 VKIYRFIVKGSVEERMLKIQERKKLIASSL 1091 >gi|227544270|ref|ZP_03974319.1| possible helicase [Lactobacillus reuteri CF48-3A] gi|227185750|gb|EEI65821.1| possible helicase [Lactobacillus reuteri CF48-3A] Length = 224 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 3/125 (2%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +L QG+ I+A N+AS + K Q+ANG V YD+++ ++H K+ ALE + Sbjct: 101 IYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCV-YDDQQQIVQIHQRKLDALEDL 159 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 +E AN P++VAY F DL +++ K P IQ+WN GKIPL HPAS GHG Sbjct: 160 VEAANGKPVLVAYWFKHDLIQIK--SRFKVREIKTPRDIQDWNAGKIPLALIHPASAGHG 217 Query: 123 LNLQY 127 LNLQ Sbjct: 218 LNLQA 222 >gi|315045788|ref|XP_003172269.1| DNA repair protein RAD16 [Arthroderma gypseum CBS 118893] gi|311342655|gb|EFR01858.1| DNA repair protein RAD16 [Arthroderma gypseum CBS 118893] Length = 946 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 50/147 (34%), Gaps = 17/147 (11%) Query: 69 APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 IV F S L ++ + + + +I + N + Sbjct: 792 NKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQRQRSIDYFMNNVDTEVFLVSLK 851 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G +R + L +++++ Sbjct: 852 AGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVE 905 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ K+ + + +N + E + Sbjct: 906 SRMVLLQEKKANMINGTINKDQSEALE 932 >gi|190408727|gb|EDV11992.1| DNA repair protein RAD16 [Saccharomyces cerevisiae RM11-1a] gi|207347673|gb|EDZ73768.1| YBR114Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256270306|gb|EEU05519.1| Rad16p [Saccharomyces cerevisiae JAY291] gi|290878128|emb|CBK39187.1| Rad16p [Saccharomyces cerevisiae EC1118] Length = 790 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 17/142 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IV F S L ++ + +D N + + + Sbjct: 639 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKA 698 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 699 GGVALNL-CEASQVFILDPWWNPSVEWQSGDRV-----HRIGQYRPVKITRFCIEDSIEA 752 Query: 179 LVLQRLRTKSTIQDLLLNALKK 200 +++ K+ + +N + Sbjct: 753 RIIELQEKKANMIHATINQDEA 774 >gi|320035113|gb|EFW17055.1| DNA excision repair protein [Coccidioides posadasii str. Silveira] Length = 1011 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 61/208 (29%), Gaps = 53/208 (25%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVI----------------------------- 62 +L N + E EK A+ + Sbjct: 542 LQKLCNHPATLIPQSTDPEEKQEKDLAMLEVAVPDQWRELYRTRGSILNYSNPEFCGKWK 601 Query: 63 -------IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN 105 AN ++V H L LQ F + + + ++N Sbjct: 602 VLKKLLKWWHANGDKVLVFSHSVRLLRMLQMLFNHTSYNVSYLDGTMSYEDRAKVVDDFN 661 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + + G GLN+ N +V W+ + R + G +R Sbjct: 662 ADPRQFVFLISTKAGGVGLNITS-ANKVVVVDPNWNPSH-----DLQAQDRAYRIGQRRD 715 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V V+ L++ TI+E+V R K + Sbjct: 716 VEVFRLVSAGTIEEIVYARQIYKQQQAN 743 >gi|241952695|ref|XP_002419069.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] gi|223642409|emb|CAX42654.1| ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 870 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 68/189 (35%), Gaps = 26/189 (13%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEV----HDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 K ++ + N Y + + K + L ++ ++ +++ F L Sbjct: 581 KMIQLRNICNSPFIYYNYPILDQTEVIRNSAKFQILNQLLPPLLSSGHKVLIFAQFTQVL 640 Query: 82 ARLQKAFPQG--------------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 L+ + +D Q N K + + G G+NL Sbjct: 641 DLLEDWLEESSSLNGRICRLDGSTNHQIRDEQISQFNNNPKFKVFLLSTRAGGLGINLVA 700 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ W+ + ++ + R + G V ++ + +++I+E+++ R +K Sbjct: 701 -ADTVILMDNDWNPQ-----MDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVLISRSGSK 754 Query: 188 STIQDLLLN 196 ++ L++ Sbjct: 755 RFLERLVIQ 763 >gi|218202221|gb|EEC84648.1| hypothetical protein OsI_31541 [Oryza sativa Indica Group] Length = 844 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 21/196 (10%), Positives = 65/196 (33%), Gaps = 37/196 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA---------------APII 72 ++ + N + +E ++E+ ++ Sbjct: 569 LLIQLRKNCNHPDLLESAYD----SSGLYPPVEKLLEQCGKFQLLNRLLSLLLARKHKVL 624 Query: 73 VAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCG 120 + + L ++ L++ I E+N+ + + + G Sbjct: 625 IFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQIAEFNDLNSSMNIFILSTRAGG 684 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + + + W+ + ++ + R + G R V VY L ++++ + Sbjct: 685 LGINLTS-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTRPVHVYRLATSHSVEGRI 738 Query: 181 LQRLRTKSTIQDLLLN 196 +++ K ++ +++ Sbjct: 739 IKKAFGKLRLEHVVIG 754 >gi|328720228|ref|XP_001950291.2| PREDICTED: lymphoid-specific helicase-like [Acyrthosiphon pisum] Length = 759 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 62/190 (32%), Gaps = 29/190 (15%) Query: 31 KCLQLANGAVYYDEE----------KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 + ++ N K + L+ ++ K +++ Sbjct: 503 QLKKIVNHPYLVQMPLIPGENKLLVDENITKVSGKFQLLDAMLTKLKILGHKVLLFSTMT 562 Query: 79 SDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 + +++ + ++ + ++ + G GLNL Sbjct: 563 QLMDVIEEFLMFRKFSFTRLDGTMSIQLRVDAMTTFNSDPECFIMMISTRAGGLGLNLTS 622 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ F W+ + ++ R + G + V VY ++NTIDE +L K Sbjct: 623 -ADTVILFDSDWNPQ-----VDLQAQDRCHRMGQTKPVVVYRFCSKNTIDERILNFATAK 676 Query: 188 STIQDLLLNA 197 ++ +++ + Sbjct: 677 RKLEKMIIGS 686 >gi|116235005|dbj|BAF34942.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gi|116235009|dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gi|222641670|gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] Length = 845 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 21/196 (10%), Positives = 65/196 (33%), Gaps = 37/196 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA---------------APII 72 ++ + N + +E ++E+ ++ Sbjct: 570 LLIQLRKNCNHPDLLESAYD----SSGLYPPVEKLLEQCGKFQLLNRLLSLLLARKHKVL 625 Query: 73 VAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCG 120 + + L ++ L++ I E+N+ + + + G Sbjct: 626 IFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQIAEFNDLNSSMNIFILSTRAGG 685 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + + + W+ + ++ + R + G R V VY L ++++ + Sbjct: 686 LGINLTS-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTRPVHVYRLATSHSVEGRI 739 Query: 181 LQRLRTKSTIQDLLLN 196 +++ K ++ +++ Sbjct: 740 IKKAFGKLRLEHVVIG 755 >gi|312076547|ref|XP_003140910.1| SNF2 family domain-containing protein [Loa loa] gi|307763929|gb|EFO23163.1| SNF2 family domain-containing protein [Loa loa] Length = 926 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 64/176 (36%), Gaps = 21/176 (11%) Query: 34 QLANGAVYYDEEKHWKE--VHDEKIKALEVIIE--KANAAPIIVAYHFNSDLA------- 82 QL + + +E + K K L+ ++ K +++ F S + Sbjct: 731 QLCSKFTSTQKFILNEEVALESGKFKELDKLLPSIKEKGDKVLIFSQFTSVMDILEVYLK 790 Query: 83 ---RLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + I E+N + + + G G+NL N ++ + Sbjct: 791 LRDHQYCRLDGSTPVMERQDVINEYNSSPDLFVFLLSTKAGGLGINLTA-ANHIILHDID 849 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ ++ R + G + VFV LI+ +T++E +L + K ++ + Sbjct: 850 FNP-----YNDKQAEGRCHRMGQTKDVFVVRLISADTVEEEMLALAQKKLELEKEV 900 >gi|145350214|ref|XP_001419509.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579741|gb|ABO97802.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 688 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 46/99 (46%), Gaps = 7/99 (7%) Query: 97 DPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +N G+ ++ + G GLNL G N L+ + W+ +R + R Sbjct: 490 RTSIVKNFNSGQGGQVMLLSVVAGGAGLNL-VGANRLILMDVSWNPAH-----DRQAMGR 543 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V +Y L++ T+++ V +R K +++ + Sbjct: 544 IWRDGQTKPVTIYRLVSAGTVEQKVFERQLGKEVLKNTV 582 >gi|218148594|ref|YP_002364362.1| hypothetical protein PP141_gp54 [Pseudomonas phage 14-1] gi|218059790|emb|CAU13906.1| hypothetical protein [Pseudomonas phage 14-1] Length = 519 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 86/215 (40%), Gaps = 24/215 (11%) Query: 2 KQYHKFQRELYCDLQGENIE---AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 K Y + + + + LQ E+ +F++A+ K Q+A+G + E D Sbjct: 300 KVYQRVEEDYHFVLQNEDFMLDVSFDAAAARSKLKQVASGYINVYGEPVILPPEDNPRFA 359 Query: 55 -KIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQE 103 LE ++E+ II+ ++ +++ + + I + Sbjct: 360 VFTDLLEGLLEEDQERSIIIWAMRIQEIDQIKAYLEAQGISFGTYYGETKEAEREKLIDD 419 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + ++ + +PA+ G G+ L ++ ++++ D E Q +R + G Sbjct: 420 FQAKRVQVFLGNPAAAGIGITLTA-ADVAIYYTTDEDNELRMQSEDR-----NHRIGTVN 473 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +V + LI ++IDE + L K + +++ + Sbjct: 474 SVLYFDLICLDSIDEKIQVSLEWKRNLASYVVDGV 508 >gi|242023584|ref|XP_002432212.1| steroid receptor-interacting snf2 domain protein, putative [Pediculus humanus corporis] gi|212517609|gb|EEB19474.1| steroid receptor-interacting snf2 domain protein, putative [Pediculus humanus corporis] Length = 2665 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 7/118 (5%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + I E+N I + + G+NL G N ++ F W+ Sbjct: 1760 YFRLDGSTPGLEREKLINEFNANPNIHMFLVSTRAGSLGINL-VGANRVIVFDASWNP-- 1816 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G ++ FVY L+ + +++ + R K + D +++ L + Sbjct: 1817 ---CHDTQAVCRVYRYGQRKQCFVYRLVMDSCLEKKIYDRQVNKQGMADRVVDELNPD 1871 >gi|168705829|ref|ZP_02738106.1| swi/snf family helicase_2 [Gemmata obscuriglobus UQM 2246] Length = 127 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 7/102 (6%) Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + + + +L + GLNLQ+ N + F WW+ IE + Sbjct: 1 PQRTPILDRFKSDPSAHVLLMSYGTGSVGLNLQFT-NYVFLFDRWWNPA-----IEDQAI 54 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G K V V ++ TI+ + L K + + L+ Sbjct: 55 NRAHRLGQKHPVTVTRFLSGGTIEGRIADILDAKRKVFNDLI 96 >gi|145482121|ref|XP_001427083.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124394162|emb|CAK59685.1| unnamed protein product [Paramecium tetraurelia] Length = 761 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 76/194 (39%), Gaps = 26/194 (13%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHW-------KEVHDEKIKALEVII--EKANAAPIIVA 74 + + ++ ++++ ++ K L++++ K +++ Sbjct: 419 SVMMQLNLLRKVTTHPKLIEDDESQAAEKLVVQDYQSVKFNCLKILVDQCKEQNEKVVIN 478 Query: 75 YHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGL 123 ++ L +++ Q + + E+N + I + + S G GL Sbjct: 479 SYYRQTLDQIEHNLIQWNLKFLRLDGKVVQKQRLTLVDEFNKDKDITVFLLNGKSGGTGL 538 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL G N ++ + W+ Q++ RI + G ++ V +Y LI T +E ++QR Sbjct: 539 NL-VGANKMICVEVDWNPANDSQVMGRIW-----RDGQQKQVHIYRLITCGTYEEKIMQR 592 Query: 184 LRTKSTIQDLLLNA 197 TK + +++ Sbjct: 593 QLTKENLSQNIVDE 606 >gi|328696868|ref|XP_001944720.2| PREDICTED: lymphocyte-specific helicase-like [Acyrthosiphon pisum] Length = 713 Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 61/194 (31%), Gaps = 29/194 (14%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVIIEKAN--AAPIIV 73 + ++ +++N ++ K L+ ++ K +++ Sbjct: 454 LNPFIQLKKISNHPYLVHMPLIPEKKKIRVDENIIKASGKFLILDAMLSKLKLLGHKVLL 513 Query: 74 AYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPASCGHG 122 L +++ N L+ + G G Sbjct: 514 FSTMTQLLDLIEEFLIFRSYKYTRLDGTMDIANRVKAITTFTNHPDCFLMLISTRAGGLG 573 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL + ++ F W+ + + R + G + V VY L ++T+DE +L Sbjct: 574 LNLTA-ADTVIIFDSDWNPQ-----CDLQAQDRCHRIGQVKPVVVYRLCTKSTVDENILA 627 Query: 183 RLRTKSTIQDLLLN 196 K ++ +++ Sbjct: 628 HAAAKRKLEKIVIG 641 >gi|149638070|ref|XP_001509622.1| PREDICTED: similar to helicase SMARCAD1 [Ornithorhynchus anatinus] Length = 872 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 68/185 (36%), Gaps = 21/185 (11%) Query: 32 CLQLAN--GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA 87 L G + + + + K K LE I+ + +++ F L L+ Sbjct: 676 LHLLCKQYGHISDFKLEMDLILDSGKFKTLEYILSELKQKGDRVVLFSQFTMMLDILEVL 735 Query: 88 FPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + I E+N + I + + G G+NL N+++ Sbjct: 736 LKHHQHRYLRLDGKTQISERIHLIDEFNTDMGIFVFLLSTKAGGLGINLTS-ANVVILHD 794 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 795 IDCNP-----YNDKQAEDRCHRVGQTKEVQVIKLISQGTIEESMLKINQHKLKLEQDMTT 849 Query: 197 ALKKE 201 A + + Sbjct: 850 ADEGD 854 >gi|242775674|ref|XP_002478688.1| DNA excision repair protein Rad16, putative [Talaromyces stipitatus ATCC 10500] gi|218722307|gb|EED21725.1| DNA excision repair protein Rad16, putative [Talaromyces stipitatus ATCC 10500] Length = 949 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 51/155 (32%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I + + Sbjct: 787 KLRSKKQTHKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGSMTPAQRQNSIDHFMKNVDV 846 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 847 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 900 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + +N + + + Sbjct: 901 LCIEDSVESRMVALQEKKANMINGTINKDQGDALE 935 >gi|190346518|gb|EDK38617.2| hypothetical protein PGUG_02715 [Meyerozyma guilliermondii ATCC 6260] Length = 1155 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 66/179 (36%), Gaps = 24/179 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR-------------LQK 86 +++ + + I L+ I E++ ++V F+S L Sbjct: 969 IFHYDPDNGSSKIQALILHLQQIQEQSPGERVVVFSQFSSYLDLIENELKVQGSDIFHVV 1028 Query: 87 AFPQGRTLDKDPCTIQEWNE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F + + I+ +N ++ +L + G GLNL + WW Sbjct: 1029 KFDGRLKMHERNQLIESFNNDDTSPRVSILLLSLKAGGVGLNLTS-ASRAFMMDPWWSPS 1087 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q I+RI + G R V V I Q +I+E +L+ K I + + A ++E Sbjct: 1088 VEDQAIDRI-----HRIGQVRNVKVTRFIIQESIEEKMLKIQERKKQIGEAV-GADEQE 1140 >gi|301103963|ref|XP_002901067.1| transcriptional regulator ATRX [Phytophthora infestans T30-4] gi|262101405|gb|EEY59457.1| transcriptional regulator ATRX [Phytophthora infestans T30-4] Length = 1272 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 19/195 (9%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI-IE 64 KF + +EA ++ L + + + I L+ I + Sbjct: 636 KFAKNFMEKYVPHQLEASGKMMILMELLSAC------QDVGDRVIIFSQSIPTLDTIGLM 689 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHG 122 + Y + I ++N+ I L+ + G G Sbjct: 690 ISKHNK----YQRRHSKRLNYLRIDGSTSQQDRFRQIAQFNDLEEDIDLIMISTKAGGEG 745 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL GN ++ F + W+ + + R + G + VFVY + T+++ V Sbjct: 746 INLCA-GNRIIIFDVCWNP-----CNDSQSMCRSYRFGQTKPVFVYRFVTMGTMEKKVYD 799 Query: 183 RLRTKSTIQDLLLNA 197 K + +++ Sbjct: 800 LQIRKEGVAKRIVDE 814 >gi|84996109|ref|XP_952776.1| DEAD-box family (SNF2-like) helicase [Theileria annulata strain Ankara] gi|65303773|emb|CAI76150.1| DEAD-box family (SNF2-like) helicase, putative [Theileria annulata] Length = 1165 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 19/163 (11%) Query: 41 YYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 Y ++ + KI+ + +I I++ F + L ++ Sbjct: 1002 YINKINKKLYLESTKIRKMLELISNIIKKKEKILIFSQFTNYLDIIEYIMKLENMKPILR 1061 Query: 93 -----TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 TL + I+++N + +L GLNL N ++ W+ Sbjct: 1062 LDGTVTLIEREKIIKKFNNEDVYILLISIKVGNVGLNL-SIANHVILMDQSWNP-----Y 1115 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G ++ V VY L +NTI+E ++ + K + Sbjct: 1116 NDIQAEDRCHRIGQQKIVHVYKLFVKNTIEEYIINQSYNKLQL 1158 >gi|51536001|dbj|BAD38081.1| putative chromatin complex subunit A101 [Oryza sativa Japonica Group] Length = 846 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 21/196 (10%), Positives = 65/196 (33%), Gaps = 37/196 (18%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA---------------APII 72 ++ + N + +E ++E+ ++ Sbjct: 571 LLIQLRKNCNHPDLLESAYD----SSGLYPPVEKLLEQCGKFQLLNRLLSLLLARKHKVL 626 Query: 73 VAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCG 120 + + L ++ L++ I E+N+ + + + G Sbjct: 627 IFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEERRRQIAEFNDLNSSMNIFILSTRAGG 686 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL + + + W+ + ++ + R + G R V VY L ++++ + Sbjct: 687 LGINLTS-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTRPVHVYRLATSHSVEGRI 740 Query: 181 LQRLRTKSTIQDLLLN 196 +++ K ++ +++ Sbjct: 741 IKKAFGKLRLEHVVIG 756 >gi|209880656|ref|XP_002141767.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209557373|gb|EEA07418.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 851 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 8/119 (6%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFS 136 DL ++ K ++ +N+ + G G+NL G N LV F Sbjct: 545 RDLQVPCVRLDGSTSITKRHSMVKIFNDPNSNSFAFLLSSKAGGCGINL-IGANRLVMFD 603 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ ++ + R + G K+ ++Y + TI+E + QR K + +L+ Sbjct: 604 PDWNPAN-----DKQALARVWRDGQKKNCYIYRFFSTGTIEEKIYQRQLCKDGLSAMLV 657 >gi|115438138|ref|XP_001217989.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188804|gb|EAU30504.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 948 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKD 97 KI+AL I+ +A +V + S L L+ + ++ +D Sbjct: 774 PSSKIEALVKILTAQGQAPGTKTVVFSQWTSFLNLLEPHLHRVGIGFARIDGKMNSVARD 833 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T + + + +L A + C GLNL N + WW IE V R Sbjct: 834 NSTYRFSRDPQCTVLLASLSVCSVGLNLVA-ANQAILADSWWAPA-----IEDQAVDRVY 887 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V+ L+ +++I++ VL K + K+ Sbjct: 888 RLGQKRETTVWRLVMEDSIEDRVLAIQDVKRQLMSAAFRETSKK 931 >gi|195569079|ref|XP_002102539.1| GD19959 [Drosophila simulans] gi|194198466|gb|EDX12042.1| GD19959 [Drosophila simulans] Length = 1069 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 22/164 (13%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKD 97 KI + I++ K++ IV + S L L+ + Sbjct: 896 PSSKINMVIQILKTTILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNR 955 Query: 98 PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + E+N+ + +L + G GLNL G N L+ L W+ + E R Sbjct: 956 QDIVNEFNDRNNQKRVLLLSLTAGGVGLNL-IGANHLLLLDLHWNPQL-----EAQAQDR 1009 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V +Y + +T+++ + K + D +L K Sbjct: 1010 IYRVGQKKNVIIYKFMCVDTVEQRIKALQDKKLDLADGVLTGAK 1053 Score = 42.8 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 7/71 (9%), Positives = 20/71 (28%), Gaps = 6/71 (8%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-----VYYDEEKHWKEVHDEKIKA 58 Y ++ + +++ ++ Q+ + EE H Sbjct: 775 YKMHEKFARMAGSKKEVKSHEILVLLLRLRQICCHPGLIDAMLDGEESQSMGDHSSDSDT 834 Query: 59 LE-VIIEKANA 68 E ++ + N Sbjct: 835 PEIDLLAQLNK 845 >gi|323305950|gb|EGA59685.1| Rad16p [Saccharomyces cerevisiae FostersB] Length = 765 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 17/142 (11%) Query: 70 PIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IV F S L ++ +D N + + + Sbjct: 614 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGXMSPTQRDETIKYFMNNIQCEVFLVSLKA 673 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 674 GGVALNL-CEASQVFILDPWWNPSVEWQSGDRV-----HRIGQYRPVKITRFCIEDSIEA 727 Query: 179 LVLQRLRTKSTIQDLLLNALKK 200 +++ K+ + +N + Sbjct: 728 RIIELQEKKANMIHATINQDEA 749 >gi|168036988|ref|XP_001770987.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162677675|gb|EDQ64142.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1385 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHPAS 118 IV + S L L+ + + + ++N ++ ++ + Sbjct: 1232 KAIVFSQWTSMLDLLETPLKKSGLCYRRLDGTMSVVARDRAVSDFNTLPEVTVMIMSLKA 1291 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ N ++ +WW+ E + R + G R V V +NTI++ Sbjct: 1292 ASLGLNMVA-ANHVLLLDVWWNPTT-----EDQAIDRAHRIGQTRTVNVSRFTIKNTIED 1345 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L K I Sbjct: 1346 RILALQERKRQIVASAFGE 1364 >gi|155370375|ref|YP_001425909.1| hypothetical protein FR483_N277L [Paramecium bursaria Chlorella virus FR483] gi|155123695|gb|ABT15562.1| hypothetical protein FR483_N277L [Paramecium bursaria Chlorella virus FR483] Length = 554 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 73/213 (34%), Gaps = 29/213 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK---HWKEVHDEKIK 57 +K Y + G++ ++ Q + + E K+K Sbjct: 332 LKAYKAY---------GDSEGRMEMLKTLLRLRQCTANITMVPKNDSKDEFYEGTSTKLK 382 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWN-E 106 LE I+ + ++ HF+ ++ ++ + D+ I+ +N + Sbjct: 383 MLEDDIKASPIQKTLIFAHFHKEMTAIKDMLLSNGHKSVSIHGNVSGDERVKAIKHFNED 442 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 A+ G GLNLQ + + + W+ E + R + G + V Sbjct: 443 PATNFFIIQIAAGGVGLNLQT-ASRIYINGVDWN-----GTSETQAIARAHRIGQTKPVI 496 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V LI ++ID+ ++ + K +L + Sbjct: 497 VKRLIINDSIDDAIIGLQQKKFGAAADILGDER 529 >gi|47221989|emb|CAG08244.1| unnamed protein product [Tetraodon nigroviridis] Length = 965 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 57/157 (36%), Gaps = 18/157 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 + L++I EK + ++ + S L + + + ++ Sbjct: 796 SAIVSELKMIREKYSDQKSVIVSQWTSMLRIVAVHLRRIGLRYGIIDGTVNPKQRMDLVE 855 Query: 103 EWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N ++ + G GLNL GGN L + W+ Q +RI + G Sbjct: 856 EFNTNAKGPQVMLVSLCAGGVGLNL-IGGNHLFLIDMHWNPALEDQACDRI-----YRVG 909 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V ++ + T++E + K + +L+ Sbjct: 910 QTKDVTIHRFECEGTVEEKISTLQVKKKELAQNVLSG 946 >gi|297663946|ref|XP_002810426.1| PREDICTED: transcription termination factor 2-like [Pongo abelii] Length = 1159 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 21/229 (9%), Positives = 63/229 (27%), Gaps = 52/229 (22%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII-----------EKANAA 69 + S+ ++ Q E+ E + + ++ Sbjct: 912 STVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSALTLSELRDSEPSST 971 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 + F +L + + +L + IQ + + ++ + + + L Sbjct: 972 VSLNGTFFKMELFEDTRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKK 1031 Query: 130 NILVF--FSLWWDLEEHQQMIE-------------------------------------- 149 + L + + ++ ++E Sbjct: 1032 HGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVQAESIAFLMAKSYLAQFYHFSRILNPSL 1091 Query: 150 -RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G ++ V ++ + + T++E +LQ K + +L+ Sbjct: 1092 EDQACDRIYRVGQQKDVVIHKFVCEGTVEEKILQLQEKKKDLAKQVLSG 1140 >gi|195144320|ref|XP_002013144.1| GL23550 [Drosophila persimilis] gi|194102087|gb|EDW24130.1| GL23550 [Drosophila persimilis] Length = 1003 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 76/200 (38%), Gaps = 18/200 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV--- 61 + ++E + + + ++ L + N + ++ +K++++ Sbjct: 791 EETKKENI----KKGENVLSDLAGDMELLNINNPIFNTSQPSTKLKIVIQKLQSILEGTT 846 Query: 62 ---IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHP 116 I+ + + + + ++ F + ++++N + +L Sbjct: 847 DKVIVVSQWTSFLDIIREYLNEHEWQTLDFNGKMDATEREVVLKDFNVIQNNKRILLLSL 906 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 S G GLNL N L+ L W+ + ER R + G ++ F+Y + Q+T+ Sbjct: 907 TSGGVGLNL-NVANHLLLVDLHWNPQL-----ERQAQDRIYRYGQQKPTFIYRFMCQDTV 960 Query: 177 DELVLQRLRTKSTIQDLLLN 196 ++ + K I +++L Sbjct: 961 EQRIKALQDYKLEIANVVLQ 980 >gi|125589589|gb|EAZ29939.1| hypothetical protein OsJ_13993 [Oryza sativa Japonica Group] Length = 1132 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 65/177 (36%), Gaps = 19/177 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR------- 92 + + K+ L I+E + IV F S L+ F Q Sbjct: 954 FQVDPENNWKDSCKVIKLIKILEGLQEKREKSIVFSQFTSFFDLLEVPFNQKGIKFLRFD 1013 Query: 93 ---TLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++E++E K +L + G GLNL + + WW+ +Q I Sbjct: 1014 GKLSQKHREKVLKEFSESKDKLVLLMSLKAGGVGLNLTA-ASNVFLMDPWWNPAVEEQAI 1072 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RI + G KRAV V I ++T++E + + K + L + + + Sbjct: 1073 MRI-----PRIGQKRAVQVRRFIVKDTVEERMQKVQACKQRMISGALTDDEVRSARI 1124 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 45/209 (21%), Gaps = 46/209 (22%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y R N ++ Q + + K Sbjct: 798 YEALFRRSKVQFDKFVAQGSVLNNYANILELLLRLRQCCDHPFLVISRADTQ-----KYT 852 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 L+ + A F + R + ++E +G Sbjct: 853 DLDEL-----------AQRFLDGVQRDSARRSAPPSQAYVEEVVEEIRQGATTECPICLE 901 Query: 118 SCGHGLNLQYGGNIL---VFFSLWWDLEEHQQMIER--------IGVTRQRQAGF----- 161 S L + + S W + R I + Q + Sbjct: 902 SASDDPVLTPCAHRMCRECLLSSWRTPSGGPCPLCRSPITKSELITLPSQCRFQVDPENN 961 Query: 162 -KRAVFVYYLIAQNTIDELVLQRLRTKST 189 K + V LI +L+ L+ K Sbjct: 962 WKDSCKVIKLI-------KILEGLQEKRE 983 >gi|241634353|ref|XP_002410509.1| conserved hypothetical protein [Ixodes scapularis] gi|215503438|gb|EEC12932.1| conserved hypothetical protein [Ixodes scapularis] Length = 1597 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 9/104 (8%) Query: 97 DPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I+ +N+ + L + G NL G N +V W+ + + Sbjct: 1264 RKRWIEMFNDESNPRGRLFLISTKAGSLGTNL-VGANRVVLMDASWNPTH-----DVQAI 1317 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K+ VF+Y +AQ T++E + R TK ++ +++ Sbjct: 1318 FRVYRFGQKKPVFIYRFLAQGTMEEKIYDRQVTKQSLACRVVDE 1361 >gi|327286256|ref|XP_003227847.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis carolinensis] Length = 1310 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 30/240 (12%), Positives = 65/240 (27%), Gaps = 56/240 (23%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 + Y KF ++ + + ++ +L + Sbjct: 367 EIYRKFI--SLDHIKELLMTTRSPLAELNILKKLCDHPRLLSARACSQLGLETSSCYDLD 424 Query: 43 -DEEKHWKEVH--------------DEKIKALEVIIE--KANAAPIIVAYHFNSDLAR-- 83 DE + +H K+ L +++ + +V L Sbjct: 425 GDENEANDVLHQNIEHLSDQVLIEESGKLLFLVALLDRLQEEGHRTLVFSQSRKMLDIIE 484 Query: 84 ----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 ++ +++ + + G GL L +V Sbjct: 485 RILTRRRFKLMRIDGTVTHLTEREKRIGMFQKNSEYSVFLLTTQVGGVGLTLTA-ATRVV 543 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ + V R + G K V +Y LI T++E + +R K ++ Sbjct: 544 IFDPSWNPAT-----DAQAVDRAYRIGQKANVVIYRLITCGTVEEKIYRRQVFKDSLIRQ 598 >gi|298705620|emb|CBJ28871.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1406 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 64/169 (37%), Gaps = 21/169 (12%) Query: 48 WKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLARLQKAF----------PQGRTLDK 96 ++ K++ L+V++E+ N +++ + + L LQ D+ Sbjct: 738 CRDDTCGKMRTLKVLLERFKNKHKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQ 797 Query: 97 DPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I + N + + + G GLNLQ + ++ + + W+ + + Sbjct: 798 RQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQA-ASKVILYDVNWNPAQ-----DAQAE 851 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G + V V+ L++ TI+EL R K + K E Sbjct: 852 DRAYRIGQLKEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGE-KAEG 899 >gi|327290056|ref|XP_003229740.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis carolinensis] Length = 697 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 63/228 (27%), Gaps = 51/228 (22%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVY---------------YDEEKHWKEVH--- 52 ++ + + ++ +L + Y E + Sbjct: 355 SLDHIKELLMTTRSPLAELTVLKKLCDHPRLLSAQACASLGLEVSEYSEPTDQSTLSMTQ 414 Query: 53 -------------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG------ 91 K+ L ++E + +V L ++ + Sbjct: 415 DIKRVSDKLLIEESGKLVFLVALLEKLQEEGHQTLVFSQSRKMLDIIEHILTKRSFRLMR 474 Query: 92 -----RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 L + ++++ + + G GL L +V F W+ Sbjct: 475 VDGTVTCLAEREKRVRQFQMDKSYSVFLLTTQVGGVGLTLTS-ATRVVIFDPSWNPAT-- 531 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + V R + G K V +Y LI T++E + +R K ++ Sbjct: 532 ---DAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIQQ 576 >gi|303388021|ref|XP_003072245.1| helicase DNA-binding protein [Encephalitozoon intestinalis ATCC 50506] gi|303301384|gb|ADM10885.1| helicase DNA-binding protein [Encephalitozoon intestinalis ATCC 50506] Length = 1225 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/261 (11%), Positives = 68/261 (26%), Gaps = 70/261 (26%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-------KEVHD 53 + Y + L +G A N + ++ + + K+ Sbjct: 521 RFYRAILEKNIEFLTKGGKESAPNLLNVMMELRKCCIHPYLIKGAEEQILSGYLKKKREK 580 Query: 54 EKIKALEVII--------------------------------------------EKANAA 69 K + E I + N Sbjct: 581 NKAEGTENDITLTSEISNGDEQANGNTVIGDIDEYYKVFIQSSGKLVLLDKLLGKLKNGH 640 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE--GKIPLLFAHPA 117 +++ L L + + + I +++ + + Sbjct: 641 KVLIFSQMTRCLDLLAEYLTYRKYKYERIDGGARTENRQAAIDRFSDKTSDVFVFLLSTR 700 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + ++ F W+ + + R + G V VY L+ +NT + Sbjct: 701 AGGVGINLTA-ADTVIIFDSDWNPQN-----DLQAQARCHRIGQTSEVKVYRLVTENTYE 754 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 + + K + +L + Sbjct: 755 REMFDKAGLKLGLDRAVLQRM 775 >gi|255945291|ref|XP_002563413.1| Pc20g09170 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588148|emb|CAP86246.1| Pc20g09170 [Penicillium chrysogenum Wisconsin 54-1255] Length = 944 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 53/151 (35%), Gaps = 17/151 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 K++ I+ F S L ++ T + +I+ + + + + Sbjct: 786 KSHTPKSIIFSQFTSMLQLVEWRLRHAGFNTVMLDGSMTPAQRQKSIEYFMTKADVEVFL 845 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G LNL + + WW+ Q +R + G +R V L + Sbjct: 846 VSLKAGGVALNLTE-ASRVFIIDPWWNPAAEWQSADR-----SHRIGQQRPCVVTRLCIE 899 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 ++++ ++Q K+ + LN + + Sbjct: 900 DSVESRIIQLQEKKANLIRGTLNKDQAAALE 930 >gi|195382577|ref|XP_002050006.1| GJ20429 [Drosophila virilis] gi|194144803|gb|EDW61199.1| GJ20429 [Drosophila virilis] Length = 1034 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 7/118 (5%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 +K + + + E+N I L + G+NL G N ++ F W+ Sbjct: 546 KKCLDGSTSSQERERLVNEFNANRNIKLFLISTRAGSLGINLT-GANRVIIFDASWNP-- 602 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G + +VY ++ +++ + R K + D +++ E Sbjct: 603 ---CHDTQAVYRIYRYGQTKPCYVYRIVMDKCLEKKIYDRQIKKQGMSDRIVDECNPE 657 >gi|154279660|ref|XP_001540643.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150412586|gb|EDN07973.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 990 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 54/171 (31%), Gaps = 17/171 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 QL + + ++ + N ++V H L LQ F Sbjct: 578 RQLYATRDSILNYANHEFCGKWRVLKKLLRWWHGNGDKVLVFSHSVRLLKMLQMLFKHTS 637 Query: 91 --------GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + + +N + + + G GLN+ N +V W+ Sbjct: 638 YNVSYLDGAMSYEDRAKVVDNFNADVREFVFLISTRAGGVGLNITS-ANKVVVVDPNWNP 696 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R V V+ L++ TI+E+V R K + Sbjct: 697 A-----YDLQAQDRAYRIGQARDVEVFRLVSAGTIEEIVYARQIYKQQQAN 742 >gi|119498441|ref|XP_001265978.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181] gi|119414142|gb|EAW24081.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181] Length = 928 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 20/154 (12%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KD 97 KI+AL I+ +A +V + S L ++ + +D Sbjct: 755 PSSKIEALIKILTAQGQAPDTKTVVFSQWTSFLTLVEPHLQRHGIGYARIDGSMKSTARD 814 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T + + + +L A + C GLNL N + WW IE V R Sbjct: 815 ASTYKFSKDPQCKVLLASLSVCSVGLNLVA-ANQAILADSWWAPA-----IEDQAVDRVY 868 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G KR V+ L+ +NTI++ VL+ TK + Sbjct: 869 RLGQKRETTVWRLVMENTIEDRVLEIQDTKRKLM 902 >gi|323705968|ref|ZP_08117539.1| SNF2-related protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323534766|gb|EGB24546.1| SNF2-related protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 930 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 69/215 (32%), Gaps = 32/215 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----DEKIK 57 K Y + N + + K ++L ++ K++ Sbjct: 702 KLYCQLIENY-----KNNEKKESPLGVLQKLMELCAHPRLIQDDGDGDTYKFINESGKLQ 756 Query: 58 ALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWN 105 L I+ + ++ H+ L+K G I ++ Sbjct: 757 RLIEIMNEIKLKGEKAVIFTHYIKMQTILRKVIMDVFGINCLVINGNIKGDRMSVIDKFR 816 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++ + G G+ + N ++ ++ W+ +E+ R + G R Sbjct: 817 KSPGFNIIILSTRAAGVGITITE-ANNVIHYTRDWNPA-----VEKQATDRVYRIGQTRE 870 Query: 165 VFVYYLIAQ----NTIDELVLQRLRTKSTIQDLLL 195 V +YY I T++E + + L+ K + + ++ Sbjct: 871 VNIYYPICTSSRGKTVEERLNEVLQKKIQLLNEVI 905 >gi|147866122|emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera] Length = 1054 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 24/204 (11%), Positives = 69/204 (33%), Gaps = 38/204 (18%) Query: 27 SKTVKCLQLANGAVYY-------DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF 77 + ++ + + + EE K+ L+ +++K + +++ Sbjct: 411 VQVIQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLIILDQLLQKLYNSGHRVLLFAQM 470 Query: 78 NSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKI-------------PLLFA 114 L LQ ++ I+ ++ + + Sbjct: 471 THTLDILQDFMELRKYSYERLDGSVRAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVFMI 530 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + ++F+ W+ + +++ + R + G V L+ Sbjct: 531 STRAGGVGLNLVA-ADTVIFYEQDWNPQ-----VDKQALQRAHRIGQMNHVLSINLVTGR 584 Query: 175 TIDELVLQRLRTKSTIQDLLLNAL 198 T++E++++R K + ++ + Sbjct: 585 TVEEIIMRRAERKLQLSHNVVGEV 608 >gi|169595490|ref|XP_001791169.1| hypothetical protein SNOG_00484 [Phaeosphaeria nodorum SN15] gi|160701103|gb|EAT91979.2| hypothetical protein SNOG_00484 [Phaeosphaeria nodorum SN15] Length = 1093 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 60/192 (31%), Gaps = 23/192 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +QY + + L+ E + L + + +K H ++ L Sbjct: 645 RQYRELYKNRDSILKQSQREFCGKWKVLRRLL----DFWHSNGDKVLIFSHSVRLLRLLR 700 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 + + +Y + + ++N + + + G Sbjct: 701 GLFDIDGTKYNFSY------------LDGSMKYEDRSKVVADFNADPDQFVFLISTKAGG 748 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLN+ N +V W+ + R + G R V V+ L++ TI+E+V Sbjct: 749 VGLNITS-ANKVVIVDPHWNPA-----YDLQAQDRAYRIGQTRDVEVFRLVSSGTIEEIV 802 Query: 181 LQRLRTKSTIQD 192 R K + Sbjct: 803 YARQIYKQQQAN 814 >gi|323508121|emb|CBQ67992.1| related to RAD16-nucleotide excision repair protein [Sporisorium reilianum] Length = 1659 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 17/152 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQE 103 K+ ++ + +V + L R ++ Sbjct: 1473 GKLDQSLEALDSYDPVKSVVFSQWTKMLDRIQKSLNLTGIRYTRLDGTMKRPDRTAALEA 1532 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + I +L + G GLNL +W+ +E G+ R + G Sbjct: 1533 FRTDPSIEVLLVSLRAGGTGLNLVSAC-RAYLMDPYWNPA-----VENQGLDRVHRMGQT 1586 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R V I +++I+E +L+ + K + + + Sbjct: 1587 RPVITTKYIMRHSIEENMLRLQKRKMMLAEKV 1618 >gi|193848582|gb|ACF22767.1| SNF2P [Brachypodium distachyon] Length = 721 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 69/202 (34%), Gaps = 38/202 (18%) Query: 28 KTVKCLQLANGAVYY-------DEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN 78 + ++ + + + EE K+ L++I++K + +++ Sbjct: 210 QVIQLRKACSHPYLFSGIEPEPYEEGEHLVQASGKLIVLDLILKKLHRLGHRVLLFAQMT 269 Query: 79 SDLAR----------LQKAFPQGRTLDKDPCTIQEW-------------NEGKIPLLFAH 115 L + ++ I+++ N + Sbjct: 270 HTLDILQDFLELRNYTYERLDGSVRAEERFAAIRKFSSQPTKGVARDDDNPSGAFVFMIS 329 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL G + ++F+ W+ + ++ + R + G V L++Q T Sbjct: 330 TRAGGVGLNL-IGADTVIFYEQDWNPQA-----DKQALQRAHRIGQLNHVLSINLVSQRT 383 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 I+E++++R K + + Sbjct: 384 IEEVIMRRAERKLKLSHNIFGD 405 >gi|326918512|ref|XP_003205532.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Meleagris gallopavo] Length = 927 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 21/190 (11%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAY 75 E++ + C Q V + + + K + LE ++ K +++ Sbjct: 721 EDMTVMTDFELHLLCKQY--SHVSDFKLDMDQILDSGKFRVLERLLSDLKEKGDRVVLFS 778 Query: 76 HFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 F L L+ + I E+N + I + + G G+N Sbjct: 779 QFTMVLDILEVFLKHWQHRYIRLDGKTQISDRIHLIDEFNTDMGIFVFLLSTKAGGLGIN 838 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L N+++ + + ++ R + G R V V LI++ TI+E +L+ Sbjct: 839 LTS-ANVVILHDIDCNP-----YNDKQAEDRCHRVGQTREVKVIKLISKGTIEESMLKMN 892 Query: 185 RTKSTIQDLL 194 + K ++ + Sbjct: 893 QQKLKLEQDM 902 >gi|323449444|gb|EGB05332.1| hypothetical protein AURANDRAFT_31163 [Aureococcus anophagefferens] Length = 281 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 8/117 (6%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + +N + + + G GLNL G + L+ Sbjct: 171 RGWPAARLDGSTPAGERQGLVNAFNRPRSDAFVFLLSTRAGGCGLNL-VGASRLLLLDPD 229 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + + R + G R V VY L+ T+DE + R K + D ++ Sbjct: 230 WNPAA-----DEQAMARVWRDGQTRPVHVYRLLGAGTVDEKIFMRQLGKHDVNDGVV 281 >gi|302823493|ref|XP_002993399.1| hypothetical protein SELMODRAFT_40953 [Selaginella moellendorffii] gi|300138830|gb|EFJ05584.1| hypothetical protein SELMODRAFT_40953 [Selaginella moellendorffii] Length = 738 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 63/164 (38%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 + K+ AL+ ++ + +++ + L L+ ++ Sbjct: 419 NCGKMLALKNLLSKWTSQGDKVLLFSYSVRMLGILEKFLIRRGYCFCRLDGSTPMNARQG 478 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N + + G GLNL N +V F W+ + + R Sbjct: 479 IVDEFNTSPSKQVVFLISTRAGGLGLNLVS-ANRVVVFDPNWNPAQ-----DLQAQDRSF 532 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G KR V V+ L+A +++EL+ R K + +L + +++ Sbjct: 533 RFGQKRHVTVFRLLAAGSLEELIYTRQIYKQQLFNLAVTGNREK 576 >gi|169616922|ref|XP_001801876.1| hypothetical protein SNOG_11638 [Phaeosphaeria nodorum SN15] gi|111060226|gb|EAT81346.1| hypothetical protein SNOG_11638 [Phaeosphaeria nodorum SN15] Length = 1020 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 65/210 (30%), Gaps = 34/210 (16%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII----E 64 ++ L+ E + A+K +L + K + ++ Sbjct: 815 KKTLAQLKKE--SLRSKAAKQKYLRRL-----------DRTWIPSAKTSKVVELLTDIKM 861 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLF 113 K + ++ F S L ++ Q + + ++ +L Sbjct: 862 KDSTEKTLIFSQFTSLLDLVEVPLVQHKFRYQRYDGSMTMDARADAVEAFMHDPNETILL 921 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + GLNL + ++ +W+ +E V R + R V V+ ++ Sbjct: 922 VSLKAGNAGLNLWK-ASQVIMLDPFWNP-----FVEEQAVDRAHRMPQNREVHVHRVLVP 975 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETI 203 ++++ + K I L+ + + Sbjct: 976 ESVEDRICALQDKKREIIGAALDENASKGL 1005 Score = 35.9 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 4/52 (7%), Positives = 13/52 (25%), Gaps = 6/52 (11%) Query: 3 QYHKFQRELYCD----LQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHW 48 Y + + L+ ++ A + ++ Q + Sbjct: 569 IYKALEAKSRIQFNKYLKQNSVSANYACILVLLLRLRQACCHPHLIKDLSQP 620 >gi|167385507|ref|XP_001737376.1| DNA repair and recombination protein RAD54B [Entamoeba dispar SAW760] gi|165899842|gb|EDR26336.1| DNA repair and recombination protein RAD54B, putative [Entamoeba dispar SAW760] Length = 764 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 79/237 (33%), Gaps = 50/237 (21%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 +K Y +E L + ++ + +L N + +++ Sbjct: 449 IKLYKIMLKE----LDKKKLDQCGALKYIQLFTKLCNHPALISKYLMEEKISLNENDENC 504 Query: 53 ----------DEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR------- 92 K I++ + +++ ++ L + F Q Sbjct: 505 IKGVTINEESSNKFNITIQFIKEIIIKSKEKVVLVSNYTKTLDLFEMYFKQEEEYKQKKI 564 Query: 93 ----------TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + +++ N+ +L + G GLNL G + L+ F W+ Sbjct: 565 FNYLRLDGKTSQKQRDIIVEKINDKSSNFNILLLSSKAGGVGLNL-IGCSRLILFDPDWN 623 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + ++ + R + G ++ +Y ++ TI+E + QR K+ I + ++ Sbjct: 624 PAK-----DKQAMARIWRDGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEE 675 >gi|301092959|ref|XP_002997329.1| DNA repair protein, putative [Phytophthora infestans T30-4] gi|262110818|gb|EEY68870.1| DNA repair protein, putative [Phytophthora infestans T30-4] Length = 736 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 53/171 (30%), Gaps = 17/171 (9%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG------ 91 + + ++ LE++ + + I+ F + L +Q G Sbjct: 553 HRISDVHAFQSSTKIEALMQELELMRARDPSGKAIIFSQFVNMLDIIQHRLQLGGVKCVK 612 Query: 92 -----RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +D ++ + + G LNL + + WW+ Sbjct: 613 LSGNMSMSVRDRTIKAFRDDPTVTAFLISLKAGGVALNLT-VASHIFLMDPWWNPAA--- 668 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E + R + G + + I T++E +L+ K I + + A Sbjct: 669 --ENQAIDRTHRLGQFKPIQATRFIIAGTVEERILKLQEKKRLIFEGTVGA 717 >gi|296123773|ref|YP_003631551.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] gi|296016113|gb|ADG69352.1| SNF2-related protein [Planctomyces limnophilus DSM 3776] Length = 872 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 69/181 (38%), Gaps = 18/181 (9%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL------ 81 + + C AN D++ + +++ + + + + IV + L Sbjct: 599 ELLYCRLAANSPELVDDQIVGESSKLDRLSEMFDEMFEGHFEKAIVFSEWTRMLDLIEPL 658 Query: 82 ----ARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + ++ ++ + +L A + GLNLQ +I++ Sbjct: 659 LDSRNLPYVRIDGQVSQRERAASVSQFEDDPGTRVLLAS-NAAATGLNLQA-ASIVINVD 716 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L W+ +Q I R + G ++ V VY L+ + T +E +L+ L K + +L+ Sbjct: 717 LPWNPAILEQRIAR-----AHRMGQEKPVQVYVLVTEETFEERLLKTLEGKEQLARAVLD 771 Query: 197 A 197 Sbjct: 772 E 772 >gi|24644932|ref|NP_524850.2| lodestar [Drosophila melanogaster] gi|30581024|sp|P34739|TTF2_DROME RecName: Full=Transcription termination factor 2; AltName: Full=Protein lodestar; AltName: Full=RNA polymerase II termination factor; AltName: Full=Transcription release factor 2 gi|7298963|gb|AAF54167.1| lodestar [Drosophila melanogaster] Length = 1061 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 22/164 (13%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKD 97 KI + I++ K++ IV + S L L+ + Sbjct: 888 PSSKINMVIQILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNR 947 Query: 98 PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + E+N+ + +L + G GLNL G N L+ L W+ + E R Sbjct: 948 QDIVNEFNDRNNQKRVLLLSLTAGGVGLNL-IGANHLLLLDLHWNPQL-----EAQAQDR 1001 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V +Y + +T+++ + K + D +L K Sbjct: 1002 IYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGVLTGAK 1045 Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 7/71 (9%), Positives = 21/71 (29%), Gaps = 6/71 (8%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-----VYYDEEKHWKEVHDEKIKA 58 Y ++ + +++ + ++ Q+ + EE H Sbjct: 767 YKMHEKFARMAGSKKEVKSHDILVLLLRLRQICCHPGLIDAMLDGEESQTMGDHSSDSDT 826 Query: 59 LE-VIIEKANA 68 E ++ + N Sbjct: 827 PEIDLLAQLNK 837 >gi|237725527|ref|ZP_04556008.1| SNF2 family helicase [Bacteroides sp. D4] gi|229436214|gb|EEO46291.1| SNF2 family helicase [Bacteroides dorei 5_1_36/D4] Length = 632 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 62/201 (30%), Gaps = 20/201 (9%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEK-- 65 L+ S + V K V K + I+E+ Sbjct: 411 NYLEALKDGMDTENPSLGMLQQLRIYCTHPYAVKDSSCKDDPSVVSVKYQRFCEIVEEII 470 Query: 66 ANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 + +IV + + + ++ C + ++N P + Sbjct: 471 SRKEKVIVFTSYKRMFEIFEEDIPVRFGIKIWSINGETPIEDRQCIVDKFNHLDEPAMLV 530 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G N ++ ++L W+ E R + G ++ VFVY L + Sbjct: 531 LNPRAAGTGLNITGANHIIHYNLEWNPSL-----EDQSSARAYRRGQEKTVFVYRLYYTD 585 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T++E+V +R+ K I + Sbjct: 586 TVEEVVNERIERKRDIASYAI 606 >gi|156839555|ref|XP_001643467.1| hypothetical protein Kpol_1006p5 [Vanderwaltozyma polyspora DSM 70294] gi|156114079|gb|EDO15609.1| hypothetical protein Kpol_1006p5 [Vanderwaltozyma polyspora DSM 70294] Length = 746 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 17/142 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IV F S L ++ + +D N + + Sbjct: 595 KSIVFSQFTSMLDLVEWRLKRAGFETVKLQGSMSPTQRDETIKYFMNNINCEVFLVSLKA 654 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 655 GGVALNL-CEASQVFILDPWWNPSVEWQSGDRV-----HRIGQYRPVKITRFCIEDSIES 708 Query: 179 LVLQRLRTKSTIQDLLLNALKK 200 +++ K+ + +N + Sbjct: 709 RIIELQEKKANMIHATINQDEA 730 >gi|149244294|ref|XP_001526690.1| DNA repair protein RAD16 [Lodderomyces elongisporus NRRL YB-4239] gi|146449084|gb|EDK43340.1| DNA repair protein RAD16 [Lodderomyces elongisporus NRRL YB-4239] Length = 902 Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 56/151 (37%), Gaps = 17/151 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG-KI 109 + + IV F S L ++ + + + TI+ + + ++ Sbjct: 742 KLRSDRHTIKSIVFSQFTSMLDLIEWRLKRAGFQTAKLSGSMSPQQRDNTIKYFMDNTEV 801 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q ++R+ + G KR + + Sbjct: 802 EVFLVSLKAGGVALNL-CEASQVFLMDPWWNPSVEWQSMDRV-----HRIGQKRPIRITR 855 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +++I+ +++ K+ + + +N + Sbjct: 856 FCIEDSIELKIIELQDKKANMINATINHDQA 886 >gi|327290729|ref|XP_003230074.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis carolinensis] Length = 697 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 63/228 (27%), Gaps = 51/228 (22%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVY---------------YDEEKHWKEVH--- 52 ++ + + ++ +L + Y E + Sbjct: 355 SLDHIKELLMTTRSPLAELTVLKKLCDHPRLLSAQACANLGLEVSEYSEPTDQSTLSMTQ 414 Query: 53 -------------DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQG------ 91 K+ L ++E + +V L ++ + Sbjct: 415 DIKRVSDKLLIEESGKLVFLVALLEKLQEEGHQTLVFSQSRKMLDIIEHILTKRSFRLMR 474 Query: 92 -----RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 L + ++++ + + G GL L +V F W+ Sbjct: 475 VDGTVTCLAEREKRVRQFQMDKSYSVFLLTTQVGGVGLTLTS-ATRVVIFDPSWNPAT-- 531 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + V R + G K V +Y LI T++E + +R K ++ Sbjct: 532 ---DAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIQQ 576 >gi|296805505|ref|XP_002843577.1| DNA repair protein RAD16 [Arthroderma otae CBS 113480] gi|238844879|gb|EEQ34541.1| DNA repair protein RAD16 [Arthroderma otae CBS 113480] Length = 867 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 17/147 (11%) Query: 69 APIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPA 117 IV F S L ++ + + + N+ + Sbjct: 713 NKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQRQRSIDHFMNDIDTEVFLVSLK 772 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G +R + L +++++ Sbjct: 773 AGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVE 826 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ K+ + + +N + E + Sbjct: 827 SRMVLLQEKKANMINGTINKGQSEALE 853 >gi|38567839|emb|CAE05788.2| OSJNBb0020J19.17 [Oryza sativa Japonica Group] Length = 1634 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 54/161 (33%), Gaps = 19/161 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ + +++ + +++ L +Q+ + + Sbjct: 592 SCKLSFMMSLLQNLVSEGHNVLIFSQTRKMLNIIQEAIILEGYKFLRIDGTTKISERERI 651 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++ EG P+ G GL L ++ W+ Q ++R + Sbjct: 652 VKDFQEGPGAPIFLLTTQVGGLGLTLTKAA-RVIVVDPAWNPSTDNQSVDR-----AYRI 705 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G + V VY L+ TI+E + + K + ++ Sbjct: 706 GQMKDVIVYRLMTSGTIEEKIYKLQVFKGALFRTATEHKEQ 746 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 32/242 (13%), Positives = 71/242 (29%), Gaps = 64/242 (26%) Query: 2 KQYHKF-----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 + Y F R L+G ++EA ++ + + + + Sbjct: 1171 RLYEAFLNKDPVRSQTGALKGSSLEASTI------LRKICDHPLLLTKRDTDDFLEEMGA 1224 Query: 52 --HDEKIKALEVIIEKA-----------------------------NAAPIIVAYHFNSD 80 ++ + +E I+E +++ Sbjct: 1225 MLNNRDMCMVERILEDNLYADKRLQIVQGASCKIAFILPLLRNLVEEGHYVLIFSQTRVM 1284 Query: 81 LARLQK----------AFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGG 129 L +Q + + ++++ EG P+L G G L Sbjct: 1285 LNLIQDAVSIEGHKFLRIDGTTKISERKKILKDFQEGLDSPILLLTSHVGGLGNTLTK-A 1343 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ W+ I+ V R + G + V VY L+ TI+E + ++ K Sbjct: 1344 DRVIVVDPAWNPS-----IDNQSVDRAYRIGQTKDVIVYRLVTCGTIEEKIYKQQIFKGG 1398 Query: 190 IQ 191 + Sbjct: 1399 LF 1400 >gi|325092609|gb|EGC45919.1| conserved hypothetical protein [Ajellomyces capsulatus H88] Length = 1032 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 54/171 (31%), Gaps = 17/171 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 QL + + ++ + N ++V H L LQ F Sbjct: 596 RQLYATRDSILNYANHEFCGKWRVLKKLLRWWHGNGDKVLVFSHSVRLLKMLQMLFKHTS 655 Query: 91 --------GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + + +N + + + G GLN+ N +V W+ Sbjct: 656 YNVSYLDGAMSYEDRAKVVDNFNADIREFVFLISTRAGGVGLNITS-ANKVVVVDPNWNP 714 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R V V+ L++ TI+E+V R K + Sbjct: 715 A-----YDLQAQDRAYRIGQARDVEVFRLVSAGTIEEIVYARQIYKQQQAN 760 >gi|123421883|ref|XP_001306074.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] gi|121887628|gb|EAX93144.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3] Length = 1483 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 27/240 (11%), Positives = 69/240 (28%), Gaps = 47/240 (19%) Query: 4 YHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE- 60 Y + L + N + +++ ++ N + + + + + ++ Sbjct: 458 YQSIYSKNMEYLHRGAHSSNTTNLQNISMELRKVCNHPYLINGAEDQIIIERKAMMNIDP 517 Query: 61 --------------------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 + KAN +++ L +Q Sbjct: 518 DVKPDLTFEYESLIRSSGKMILLDKLLAKLKANGHRVLLFSQMTKMLDIIQDYLVYKGYK 577 Query: 95 DKD----------PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + I ++NE + + G G+NL + ++ + W+ + Sbjct: 578 FERLDGSVKSEIRQGMIDKFNEEGSEDFIFLLCTKAGGLGINLTS-ADTVIIYDSDWNPQ 636 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G K+ V VY L+ + + + K + +L K + Sbjct: 637 N-----DLQATARAHRIGQKKNVKVYRLLTAKSYERKMFDTAAIKLGLDQAVLENTKDKP 691 >gi|157103789|ref|XP_001648131.1| helicase [Aedes aegypti] gi|108880486|gb|EAT44711.1| helicase [Aedes aegypti] Length = 707 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 65/210 (30%), Gaps = 27/210 (12%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DEKIKAL 59 R++ + + Q+ EE + ++ L Sbjct: 392 LCRDVRLLKGDGTYTKYMMRNIFPHLRQVTLHPYLIPEESEEETFVTQEIVDVSSRMIVL 451 Query: 60 EVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 + ++++ + + +++ L L+ ++ I E+N Sbjct: 452 DKLLDELHKRGSRVLLFSQMVIMLNVLEDYMEWKGYKYHRMTGTTQQEERQAMIDEFNSP 511 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G G+NLQ + ++F+ L W+ + + R + G + V Sbjct: 512 GSDTFIFMITTRTGGIGINLQT-ADTVIFYDLDWNPQA-----DFQAEDRAHRIGQTKQV 565 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V T+DE V K + ++ Sbjct: 566 HVIRFTVVGTVDEYVHVCSNRKQALDKAIV 595 >gi|145494324|ref|XP_001433156.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124400273|emb|CAK65759.1| unnamed protein product [Paramecium tetraurelia] Length = 1030 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 73/218 (33%), Gaps = 28/218 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEV------HD 53 K Y + + ++ ++ + A + ++ ++ N + + Sbjct: 618 KIYDQINQRGVMTFDQQSGKSGSQALQNLMMQLRKICNHPYLFMLNLDMNRITDEIWRSS 677 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K + L+ II K +++ + ++ F + I Sbjct: 678 GKFELLDRIIPKLLYFKHRLLIFSQMTQLMDIMEAYFEYRGWRYLRLDGSTKSEDRETRI 737 Query: 102 QEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +N + + G GLNLQ + +V F W+ M++ R + Sbjct: 738 KLFNQENSIYNIFLLSTRAGGLGLNLQS-ADTVVLFDSDWNP-----MMDLQAQDRAYRI 791 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K V V LI I+ +L + K + +++ A Sbjct: 792 GQKNEVRVLRLITATQIEGNILSKAEHKMGLDAIIIQA 829 >gi|224004522|ref|XP_002295912.1| ATP-dependent helicase [Thalassiosira pseudonana CCMP1335] gi|209585944|gb|ACI64629.1| ATP-dependent helicase [Thalassiosira pseudonana CCMP1335] Length = 841 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 19/157 (12%) Query: 53 DEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKA-FPQGRTLDK---------DPCT 100 K+K L+ + K ++V + + L +Q+ QG T + Sbjct: 410 SGKMKTLDYCLRKYQKKRHRVLVFSYSTATLDLIQQHVKTQGWTHLRLDGQTATSTRQAL 469 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ + I + + G GLNL N ++ F + W+ + R + Sbjct: 470 VDQFQRDQAIFVFLISTRAGGLGLNLTA-ANKVIIFDVNWNPS-----YDEQAQDRSFRI 523 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G ++ V V L+A+ TI+E + R K+ ++ L Sbjct: 524 GQEKNVEVLRLVARGTIEEQMYARQVYKTQLKKQTLG 560 >gi|115334572|dbj|BAF33276.1| chromodomain helicase DNA binding protein 1 [Eudromia elegans] Length = 301 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 8/104 (7%) Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 34 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 87 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 88 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 131 >gi|47217489|emb|CAG10869.1| unnamed protein product [Tetraodon nigroviridis] Length = 861 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 62/180 (34%), Gaps = 20/180 (11%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLA--- 82 + + Q + + + + K L+ ++ K +++ F L Sbjct: 664 ELHRLCQQYSS-ISSYQLDTDLLLDSGKFILLKELLTSLKKKGDRVVLFSQFTMMLDIIE 722 Query: 83 -------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + I E+N + I + + G G+NL N+++ Sbjct: 723 VLLKHLSHRYIRLDGSTPIADRIVLIDEYNTDSDIFVFLLSTRAGGLGINLTS-ANVVIL 781 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + ++ R + G R V V LI++ TIDE +LQ + K ++ + Sbjct: 782 HDIDCNP-----YNDKQAEDRCHRVGQTRTVRVIKLISKGTIDECILQLGQKKLKLEHDM 836 >gi|68468463|ref|XP_721791.1| hypothetical protein CaO19.1720 [Candida albicans SC5314] gi|68468704|ref|XP_721671.1| hypothetical protein CaO19.9288 [Candida albicans SC5314] gi|46443600|gb|EAL02881.1| hypothetical protein CaO19.9288 [Candida albicans SC5314] gi|46443729|gb|EAL03009.1| hypothetical protein CaO19.1720 [Candida albicans SC5314] Length = 864 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 69/189 (36%), Gaps = 26/189 (13%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEV----HDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 K ++ + N Y + + K + L ++ ++ +++ F L Sbjct: 581 KMIQLRNICNSPFIYYNYPILDQAEVIRNSAKFQVLNQLLPPLLSSGHKVLIFAQFTKVL 640 Query: 82 ARLQKAFPQGR--------------TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 L+ + +D Q N K + + + G G+NL Sbjct: 641 DLLEDWLEESPLSHGKICRLDGSTNHQIRDEQISQFNNNPKFKVFLSSTRAGGLGINLVA 700 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ W+ + ++ + R + G V ++ + +++I+E+++ R +K Sbjct: 701 -ADTVILMDNDWNPQ-----MDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVLISRSGSK 754 Query: 188 STIQDLLLN 196 ++ L++ Sbjct: 755 RFLERLVIQ 763 >gi|326671144|ref|XP_691636.4| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Danio rerio] Length = 1020 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 67/180 (37%), Gaps = 20/180 (11%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQ 85 + + Q + A++ + + K+ L ++ K +++ F L L+ Sbjct: 823 ELHRLCQQYS-ALHEYQLNTDVLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILE 881 Query: 86 KAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + I ++N + I + + G G+NL N+++ Sbjct: 882 VFLRHHKHRYNRLDGSTPMSDRIGLIDQFNTDQDIFVFLLSTRAGGLGINLTS-ANVVIL 940 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + ++ R + G + V V LI++++I++ +L+ K ++ + Sbjct: 941 HDIDCNP-----YNDKQAEGRCHRVGQTKTVKVIKLISKDSIEDTMLRIGERKLKLEQEM 995 >gi|219118975|ref|XP_002180254.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408511|gb|EEC48445.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 126 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 7/115 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F + +D+ + +N + K+ S G G+NL G + ++F+ Sbjct: 18 FLNLNGHTYLRLDGSTGVDRRQRLMDRFNNDPKLFCFILSTRSGGLGINLT-GADSVIFY 76 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 W+ ++ R + G R V +Y + ++TI+E +L + + K + Sbjct: 77 DSDWNPA-----MDAQAQDRAHRIGQTRDVHIYRFVTEHTIEENILVKAQQKRNL 126 >gi|323441318|gb|EGA98983.1| phage helicase [Staphylococcus aureus O46] Length = 128 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 6/130 (4%) Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + Y+F D R+ + F + T +D + WN G I LL AHPAS GHGLNLQ GG+I+ Sbjct: 1 MFYNFKHDKERILERFKEATT-LEDSNYKERWNSGNIKLLIAHPASAGHGLNLQQGGHII 59 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V+F L W LE +Q R + G +++L+ NTID+ V + L+ K Q+ Sbjct: 60 VWFGLTWSLELYQ-----QANARLYRQGQNHTTIIHHLMTDNTIDQRVYKALQNKELTQE 114 Query: 193 LLLNALKKET 202 L+ A+K Sbjct: 115 ELMKAIKARI 124 >gi|190345081|gb|EDK36901.2| hypothetical protein PGUG_00999 [Meyerozyma guilliermondii ATCC 6260] Length = 542 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 19/160 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRTLD-------- 95 + + ++ K+ L I++ A +V F L L+K G Sbjct: 370 EDKEWLNSGKVGLLMDHIKEIMARKERVLVFSLFTQMLDILEKVLTIGNIKFLRLDGQTS 429 Query: 96 ---KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +++ IP+ + G G+NL N +V F ++ + +R Sbjct: 430 VDTRQDLIDTFYDDDTIPVFLLSTKAGGFGINLVA-ANNVVIFDQSFNPHD-----DRQA 483 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G V V I++ TI+E +LQ K + Sbjct: 484 EDRAHRVGQTSEVLVTRFISKGTIEENMLQLAENKLQLDQ 523 >gi|325180152|emb|CCA14554.1| ATPdependent helicase putative [Albugo laibachii Nc14] Length = 945 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 58/164 (35%), Gaps = 19/164 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + K L+ + K +++ + L L+ ++ Sbjct: 744 LDSAKFHYLDTQLPKLKQEGHRVLIFSQWTKLLDLLEVLMKHKQYRFLRLDGSTMVETRQ 803 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N + I + + G G+NL + ++ L ++ + R Sbjct: 804 QLIDEYNSDQDIFVFLLSTRAGGLGINLTA-ADTVILHDLDFNPTN-----DEQACDRCH 857 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V +Y L+A+NT+D + + K + +L L E Sbjct: 858 RIGQTRPVSIYKLVAENTVDHDIYKLGEVKRQLNHAVLGNLNDE 901 >gi|146418040|ref|XP_001484986.1| hypothetical protein PGUG_02715 [Meyerozyma guilliermondii ATCC 6260] Length = 1155 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 66/179 (36%), Gaps = 24/179 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR-------------LQK 86 +++ + + I L+ I E++ ++V F+S L Sbjct: 969 IFHYDPDNGSSKIQALILHLQQIQEQSPGERVVVFSQFSSYLDLIENELKVQGSDIFHVV 1028 Query: 87 AFPQGRTLDKDPCTIQEWNE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F + + I+ +N ++ +L + G GLNL + WW Sbjct: 1029 KFDGRLKMHERNQLIESFNNDDTSPRVSILLLSLKAGGVGLNLTS-ASRAFMMDPWWSPS 1087 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q I+RI + G R V V I Q +I+E +L+ K I + + A ++E Sbjct: 1088 VEDQAIDRI-----HRIGQVRNVKVTRFIIQESIEEKMLKIQERKKQIGEAV-GADEQE 1140 >gi|85000227|ref|XP_954832.1| global transcription activator, SNF2 family member [Theileria annulata strain Ankara] gi|65302978|emb|CAI75356.1| global transcription activator, SNF2 family member, putative [Theileria annulata] Length = 1162 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 57/174 (32%), Gaps = 25/174 (14%) Query: 28 KTVKCLQLANGAVY-----YDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 K ++ ++ N + K+ L++I+ + +++ S Sbjct: 646 KFLQLRKICNHPFLYVNNNFIPCNDLIINSSGKMCILDMILSRLYYVNHRVLIFSQMTSL 705 Query: 81 LARLQKAFPQGRTLD----------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYG 128 L L+ K I +NE + + G+NLQ Sbjct: 706 LDILEVYLNYRSYKYLRLDGNLSSEKRLERINLFNEPDSQYFVFILSTKAGSLGINLQS- 764 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + ++ + W+ + + +R + G K V LI NTI++ + + Sbjct: 765 ADTVIIYDSDWNPQN-----DLQAQSRVHRIGQKNQVITLRLITPNTIEDNIYR 813 >gi|302695141|ref|XP_003037249.1| hypothetical protein SCHCODRAFT_73063 [Schizophyllum commune H4-8] gi|300110946|gb|EFJ02347.1| hypothetical protein SCHCODRAFT_73063 [Schizophyllum commune H4-8] Length = 1205 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 54/149 (36%), Gaps = 20/149 (13%) Query: 70 PIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 +V + + L R + + D+ + +L + Sbjct: 1052 KTVVFSQWTTMLDKIEEALDVAGIRYDRLDGTMKRDDRTRAMDALKYDPGCEVLLVSLKA 1111 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + + +W+ Q ++RI + G R V LI +NTI+ Sbjct: 1112 GGVGLNLTA-ASRVYLMDPYWNPAVENQAVDRI-----HRLGQTRPVTTVKLIIENTIEA 1165 Query: 179 LVLQRLRTKSTIQDLLLNAL---KKETIH 204 +L+ + K+ + ++ L+ K E + Sbjct: 1166 RLLEVQKKKTALANMTLDRQSFSKAELMQ 1194 >gi|303323511|ref|XP_003071747.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240111449|gb|EER29602.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1011 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKIPLLF 113 AN ++V H L LQ F + + + ++N + + + Sbjct: 611 HANGDKVLVFSHSVRLLRMLQMLFNHTSYNVSYLDGTMSYEDRAKVVDDFNADPRQFVFL 670 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G +R V V+ L++ Sbjct: 671 ISTKAGGVGLNITS-ANKVVVVDPNWNPSH-----DLQAQDRAYRIGQRRDVEVFRLVSA 724 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 725 GTIEEIVYARQIYKQQQAN 743 >gi|222629845|gb|EEE61977.1| hypothetical protein OsJ_16754 [Oryza sativa Japonica Group] Length = 1678 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 54/161 (33%), Gaps = 19/161 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ + +++ + +++ L +Q+ + + Sbjct: 637 SCKLSFMMSLLQNLVSEGHNVLIFSQTRKMLNIIQEAIILEGYKFLRIDGTTKISERERI 696 Query: 101 IQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++ EG P+ G GL L ++ W+ Q ++R + Sbjct: 697 VKDFQEGPGAPIFLLTTQVGGLGLTLTKAA-RVIVVDPAWNPSTDNQSVDR-----AYRI 750 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G + V VY L+ TI+E + + K + ++ Sbjct: 751 GQMKDVIVYRLMTSGTIEEKIYKLQVFKGALFRTATEHKEQ 791 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 32/242 (13%), Positives = 71/242 (29%), Gaps = 64/242 (26%) Query: 2 KQYHKF-----QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----- 51 + Y F R L+G ++EA ++ + + + + Sbjct: 1215 RLYEAFLNKDPVRSQTGALKGSSLEASTI------LRKICDHPLLLTKRDTDDFLEEMGA 1268 Query: 52 --HDEKIKALEVIIEKA-----------------------------NAAPIIVAYHFNSD 80 ++ + +E I+E +++ Sbjct: 1269 MLNNRDMCMVERILEDNLYADKRLQIVQGASCKIAFILPLLRNLVEEGHYVLIFSQTRVM 1328 Query: 81 LARLQK----------AFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGG 129 L +Q + + ++++ EG P+L G G L Sbjct: 1329 LNLIQDAVSIEGHKFLRIDGTTKISERKKILKDFQEGLDSPILLLTSHVGGLGNTLTK-A 1387 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ W+ I+ V R + G + V VY L+ TI+E + ++ K Sbjct: 1388 DRVIVVDPAWNPS-----IDNQSVDRAYRIGQTKDVIVYRLVTCGTIEEKIYKQQIFKGG 1442 Query: 190 IQ 191 + Sbjct: 1443 LF 1444 >gi|326477312|gb|EGE01322.1| DNA repair protein RAD16 [Trichophyton equinum CBS 127.97] Length = 947 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 49/147 (33%), Gaps = 17/147 (11%) Query: 69 APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 IV F S L ++ + + + +I + + Sbjct: 793 NKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQRQRSIDYFMQNVDTEVFLVSLK 852 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G +R + L +++++ Sbjct: 853 AGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVE 906 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ K+ + + +N + E + Sbjct: 907 SRMVLLQEKKANMINGTINKDQSEALE 933 >gi|224008985|ref|XP_002293451.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970851|gb|EED89187.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 543 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 75/236 (31%), Gaps = 53/236 (22%) Query: 3 QYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 Y + + L G+ + S +K N EK Sbjct: 280 MYAHLCNSKAMQHVLDGKQVNCLGSIQMLMKL---CNHPSLVVNEKSSAAPGADGIAKFM 336 Query: 53 -----------------DEKIKALEVIIEKA-----NAAPIIVAYHFNSDLARLQKAFPQ 90 K+ L ++ + I++ ++ L + + + Sbjct: 337 PYEAIRGDRNAPVMPELSGKMFVLFRLMREMRRPGNGNDKIVIVSNYTQTLDLIGRMCRE 396 Query: 91 ----------GRTLDKDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLW 138 ++ K E+N+ L + G GLNL GGN LV F Sbjct: 397 NNWGFCRLDGSISMKKRQKMCDEFNDPSSSLVAFLLSSKAGGCGLNL-IGGNRLVLFDPD 455 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W+ +++ R + G K+ F Y +A T++E + QR +K +Q ++ Sbjct: 456 WNPA-----VDKQAAARCWRDGQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVV 506 >gi|195028444|ref|XP_001987086.1| GH20163 [Drosophila grimshawi] gi|193903086|gb|EDW01953.1| GH20163 [Drosophila grimshawi] Length = 1645 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 43/123 (34%), Gaps = 7/123 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + + E+N I L + G+NL G N ++ F Sbjct: 1030 MRNVSYFRLDGSTSSQERERLVNEFNANRNIKLFLISTRAGSLGINLT-GANRVIIFDAS 1088 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ + V R + G + +VY ++ +++ + R K + D +++ Sbjct: 1089 WNP-----CHDTQAVYRIYRYGQTKQCYVYRIVMDKCLEKKIYDRQIKKQGMSDRIVDEC 1143 Query: 199 KKE 201 E Sbjct: 1144 NPE 1146 >gi|85102654|ref|XP_961377.1| DNA repair protein RAD16 [Neurospora crassa OR74A] gi|16944468|emb|CAC18166.2| probable nucleotide exsicion repair protein RAD16 [Neurospora crassa] gi|28922921|gb|EAA32141.1| DNA repair protein RAD16 [Neurospora crassa OR74A] Length = 1079 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 49/153 (32%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + L + + I+ F + L ++ T + +I + Sbjct: 913 VHELHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASINHFM 972 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G LNL + + WW+ Q +R + G R Sbjct: 973 TNVDVECFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQSRP 1026 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + L +++++ ++ K+ + + +NA Sbjct: 1027 CTITRLCIEDSVESRMVLLQEKKTNMINSTINA 1059 >gi|328862898|gb|EGG11998.1| hypothetical protein MELLADRAFT_76519 [Melampsora larici-populina 98AG31] Length = 779 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 23/169 (13%) Query: 53 DEKIKALEVIIEK------ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 KI L ++++ IV F S L ++ + + Sbjct: 604 STKISRLLELLDEIASESSEKPKKTIVFSQFTSFLDLIEPFIKKAKHGYARYDGAKTADE 663 Query: 98 --PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ K +L GLNL + +V WW+ IE R Sbjct: 664 KAEALNKIKHDPKCTVLLISLRCGSVGLNL-ICCSRVVLMDPWWNPS-----IESQAFDR 717 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G + V Y + +TI++ +L+ K +I + L + ++ Sbjct: 718 AHRFGQRDDVKCYKITIADTIEDRILKLQEDKQSIANQALGTEAAKKMN 766 >gi|119188869|ref|XP_001245041.1| hypothetical protein CIMG_04482 [Coccidioides immitis RS] Length = 1011 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKIPLLF 113 AN ++V H L LQ F + + + ++N + + + Sbjct: 611 HANGDKVLVFSHSVRLLRMLQMLFNHTSYNVSYLDGTMSYEDRAKVVDDFNADPRQFVFL 670 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G +R V V+ L++ Sbjct: 671 ISTKAGGVGLNITS-ANKVVVVDPNWNPSH-----DLQAQDRAYRIGQRRDVEVFRLVSA 724 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 725 GTIEEIVYARQIYKQQQAN 743 >gi|326472991|gb|EGD97000.1| DNA repair protein RAD16 [Trichophyton tonsurans CBS 112818] Length = 947 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 49/147 (33%), Gaps = 17/147 (11%) Query: 69 APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 IV F S L ++ + + + +I + + Sbjct: 793 NKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQRQRSIDYFMQNVDTEVFLVSLK 852 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G +R + L +++++ Sbjct: 853 AGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVE 906 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ K+ + + +N + E + Sbjct: 907 SRMVLLQEKKANMINGTINKDQSEALE 933 >gi|302916069|ref|XP_003051845.1| hypothetical protein NECHADRAFT_106058 [Nectria haematococca mpVI 77-13-4] gi|256732784|gb|EEU46132.1| hypothetical protein NECHADRAFT_106058 [Nectria haematococca mpVI 77-13-4] Length = 1919 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 6/120 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 R ++ I+ +NEG + + G GLN+ G N +V F Sbjct: 1316 MCKMQLRTISRLDGSTAVESRQEEIKRFNEGSKEVYLISTTAGGVGLNIH-GANRVVIFD 1374 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + W+ QQ I R + G K+ VFVY+L T ++++ + K + +++ Sbjct: 1375 IKWNPTVEQQGIGR-----AYRLGQKKPVFVYWLTTAGTFEQIIHNQHVFKQQLAARVVD 1429 >gi|50554893|ref|XP_504855.1| YALI0F01232p [Yarrowia lipolytica] gi|49650725|emb|CAG77657.1| YALI0F01232p [Yarrowia lipolytica] Length = 844 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 50/160 (31%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDK 96 KI+AL + K IV F S L ++ + Sbjct: 671 SSTKIEALVEELYKLRSDRQTIKSIVFSQFTSMLDLVEWRLRRAGFQTVKLQGNMSPTQR 730 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + + G LNL + + WW+ Q +R+ Sbjct: 731 QNSIKYFMENPQVEVFLVSLKAGGVALNL-CEASQVFILDPWWNPSVEWQSGDRV----- 784 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V + +++I+ +++ K+++ L Sbjct: 785 HRIGQHRPVKITRFAIEDSIESRIIELQEKKASMIHATLG 824 >gi|323338667|gb|EGA79883.1| Rad16p [Saccharomyces cerevisiae Vin13] Length = 611 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 17/142 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IV F S L ++ + +D N + + + Sbjct: 460 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKA 519 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 520 GGVALNL-CEASQVFILDPWWNPSVEWQSGDRV-----HRIGQYRPVKITRFCIEDSIEA 573 Query: 179 LVLQRLRTKSTIQDLLLNALKK 200 +++ K+ + +N + Sbjct: 574 RIIELQEKKANMIHATINQDEA 595 >gi|321255221|ref|XP_003193350.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 [Cryptococcus gattii WM276] gi|317459820|gb|ADV21563.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, putative [Cryptococcus gattii WM276] Length = 899 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 58/179 (32%), Gaps = 25/179 (13%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLA----------RLQKAFPQ 90 Y + ++ KI L + +V F S L F Sbjct: 707 YIPSSQARSINSAKIDELVKYLRIFPRNDKTLVFSQFTSFLDCVGVRLEEEGIKFVRFDG 766 Query: 91 GRTLDKDPCTIQEWNEG--------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + I+ + E ++ S GLNL + + WW Sbjct: 767 RMSGKQRTAVIKTFQEPVKGDDDEKTPKVMLISLKSGAVGLNLTA-ASNVFLCDPWW--- 822 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q IE + R + G K+ V V+ LIA+NTI+ VL + K + KE Sbjct: 823 --QSAIEAQAIDRAHRMGQKKIVRVFQLIAENTIESSVLDIQKRKDAMVAKAFEKSSKE 879 >gi|307206570|gb|EFN84572.1| TATA-binding protein-associated factor 172 [Harpegnathos saltator] Length = 318 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 64/184 (34%), Gaps = 20/184 (10%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 +K QL + + + + + ++ + L ++K Sbjct: 65 AKLPALKQLLLDCGIGQQNQQARGSSSTTSTDSTQQQQLVSQHRALIFCQLKAMLDIVEK 124 Query: 87 AFPQGR-------------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNIL 132 + + + +N + I +L G GLNL G + + Sbjct: 125 DLLRMHLPTVTYLRLDGSIPAAQRHSVVARFNADPSIDVLLLTTQVGGLGLNLT-GADTV 183 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 +F W+ M + + R + G K+ V VY LI ++T++E ++ + K + Sbjct: 184 IFVEHDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRSTVEEKIMGLQKFKLLTAN 238 Query: 193 LLLN 196 +++ Sbjct: 239 TVIS 242 >gi|195344346|ref|XP_002038749.1| GM10987 [Drosophila sechellia] gi|194133770|gb|EDW55286.1| GM10987 [Drosophila sechellia] Length = 286 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 22/164 (13%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKD 97 KI + I++ K++ IV + S L L+ + Sbjct: 113 PSSKINMVIQILKTTILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNR 172 Query: 98 PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + E+N+ + +L + G GLNL G N L+ L W+ + E R Sbjct: 173 QDIVNEFNDRNNQKRVLLLSLTAGGVGLNL-IGANHLLLLDLHWNPQL-----EAQAQDR 226 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V +Y + +T+++ + K + D +L K Sbjct: 227 IYRVGQKKNVIIYKFMCVDTVEQRIKALQDKKLDLADGVLTGAK 270 Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 6/58 (10%), Positives = 18/58 (31%), Gaps = 6/58 (10%) Query: 17 GENIEAFNSASKTVKCLQLANGA-----VYYDEEKHWKEVHDEKIKALE-VIIEKANA 68 + +++ + ++ Q+ + EE H E ++ + N Sbjct: 5 KKEVKSHDILVLLLRLRQICCHPGLIDAMLDGEESQSMGDHSSDSDTPEIDLLAQLNK 62 >gi|118090021|ref|XP_420485.2| PREDICTED: similar to helicase SMARCAD1 [Gallus gallus] Length = 969 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 21/190 (11%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAY 75 E++ + C Q V + + + K + LE ++ K +++ Sbjct: 763 EDMTVMTDFELHLLCKQY--SHVSDFKLDMDQILDSGKFRVLERLLSDLKEKGDRVVLFS 820 Query: 76 HFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 F L L+ + I E+N + I + + G G+N Sbjct: 821 QFTMVLDILEVFLKHWQHRYIRLDGKTQISDRIHLIDEFNTDMDIFVFLLSTKAGGLGIN 880 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L N+++ + + ++ R + G R V V LI++ TI+E +L+ Sbjct: 881 LTS-ANVVILHDIDCNP-----YNDKQAEDRCHRVGQTREVKVIKLISKGTIEESMLKMN 934 Query: 185 RTKSTIQDLL 194 + K ++ + Sbjct: 935 QQKLKLEQDM 944 >gi|172320|gb|AAA34930.1| excision repair protein [Saccharomyces cerevisiae] Length = 392 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 17/142 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IV F S L ++ + +D N + + + Sbjct: 241 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKA 300 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 301 GGVALNL-CEASQVFILDPWWNPSVEWQSGDRV-----HRIGQYRPVKITRFCIEDSIEA 354 Query: 179 LVLQRLRTKSTIQDLLLNALKK 200 +++ K+ + +N + Sbjct: 355 RIIELQEKKANMIHATINQDEA 376 >gi|146423386|ref|XP_001487622.1| hypothetical protein PGUG_00999 [Meyerozyma guilliermondii ATCC 6260] Length = 542 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 19/160 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPI--IVAYHFNSDLARLQKAFPQGRTLD-------- 95 + + ++ K+ L I++ A +V F L L+K G Sbjct: 370 EDKEWLNSGKVGLLMDHIKEIMARKERVLVFSLFTQMLDILEKVLTIGNIKFLRLDGQTS 429 Query: 96 ---KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +++ IP+ + G G+NL N +V F ++ + +R Sbjct: 430 VDTRQDLIDTFYDDDTIPVFLLSTKAGGFGINLVA-ANNVVIFDQSFNPHD-----DRQA 483 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G V V I++ TI+E +LQ K + Sbjct: 484 EDRAHRVGQTSEVLVTRFISKGTIEENMLQLAENKLQLDQ 523 >gi|224098212|ref|XP_002194690.1| PREDICTED: similar to excision repair cross-complementing rodent repair deficiency, complementation group 6-like [Taeniopygia guttata] Length = 1170 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 38/122 (31%), Gaps = 6/122 (4%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 L+ +++ + G G+ L + +V F Sbjct: 507 RRQFQILRIDGTVTHLTERERRINAFQTNTTYSVFLLTTQVGGVGITLTA-ASRVVIFDP 565 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G K V +Y LI T++E + +R K ++ Sbjct: 566 SWNPAT-----DAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIRQTTGD 620 Query: 198 LK 199 K Sbjct: 621 KK 622 >gi|207345463|gb|EDZ72281.1| YGL163Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 405 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 71/219 (32%), Gaps = 43/219 (19%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE---------------- 45 + Y+K + + + +L N + E Sbjct: 175 ELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLLNFEDEFDDEDDLELPDDYN 234 Query: 46 ------KHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR---- 92 + + + K LE + K + I++ ++ L ++K Sbjct: 235 MPGSKARDVQTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAV 294 Query: 93 ------TLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +++K + +N+ + + + G G+NL G N L+ W+ Sbjct: 295 RLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINL-IGANRLILMDPDWNPAAD 353 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 Q + R + G K+ F+Y I+ TI+E +L + Sbjct: 354 Q-----QALARVWRDGQKKDCFIYRFISTGTIEEKILSK 387 >gi|154488700|ref|ZP_02029549.1| hypothetical protein BIFADO_02007 [Bifidobacterium adolescentis L2-32] gi|154082837|gb|EDN81882.1| hypothetical protein BIFADO_02007 [Bifidobacterium adolescentis L2-32] Length = 721 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 17/154 (11%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCT 100 K K L IIE+ + ++V + + ++ T + Sbjct: 515 KDSGKAKRLLEIIEEAKSEGRKVLVFSFYLDTIRKIADMLGSQCTEPINGSITPTRRQEI 574 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++ +L A + G GLN+Q ++++ IE ++R + Sbjct: 575 IDDFDKAPAGQVLVAQIVAGGTGLNIQS-ASVVIICEPQLKPS-----IENQAISRAYRM 628 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 G R V VY L+A+NTIDE + L K + + Sbjct: 629 GQARNVLVYRLLAENTIDEKITDILARKQEVFNA 662 >gi|322799536|gb|EFZ20844.1| hypothetical protein SINV_13363 [Solenopsis invicta] Length = 305 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 7/120 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + +N + I +L G GLNL G + ++F Sbjct: 87 THLPTVTYLRLDGSVPATQRHSVVARFNADPSIDVLLLTTQVGGLGLNLT-GADTVIFVE 145 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY LI + T++E ++ + K + +++ Sbjct: 146 HDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRATVEEKIMGLQKFKLLTANTIIS 200 >gi|215693288|dbj|BAG88670.1| unnamed protein product [Oryza sativa Japonica Group] Length = 607 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 17/167 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----- 94 D EK+W E E+ + + + A I+ + + L LQ + Sbjct: 429 FQIDVEKNWVESSKISFLLQELEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLD 488 Query: 95 -----DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I+E+ + I +L + G G+NL + WW+ +Q I Sbjct: 489 GTLNLQQREKVIKEFSEDKSILVLLMSLKAGGVGINLTA-ASNAFVMDPWWNPAVEEQAI 547 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI + G ++V + I + T++E + K + L Sbjct: 548 MRI-----HRIGQTKSVSIKRFIVKGTVEERMEAVQARKQRMISGAL 589 Score = 36.3 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 14/193 (7%), Positives = 43/193 (22%), Gaps = 28/193 (14%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y R + ++ Q + +E D Sbjct: 275 YDALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVLSRGDTQEFADLNKL 334 Query: 58 ALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 A + N + + + ++ + + + ++ + + Sbjct: 335 AKRFLHGGNGAVNGDSSLPSRAYIEEVVQELQKGEGECPI-----CLEAFED-----AVL 384 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 P + S W + R +++Q + +N Sbjct: 385 TPCAHRLCRE--------CLLSSWRSASAGLCPVCRKSMSKQDLITAPTDNRFQIDVEKN 436 Query: 175 TID-ELVLQRLRT 186 ++ + L+ Sbjct: 437 WVESSKISFLLQE 449 >gi|307199888|gb|EFN80285.1| DNA repair and recombination protein RAD54B [Harpegnathos saltator] Length = 509 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 8/102 (7%) Query: 97 DPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I+++N + +L + G GLNL G + LV F W+ Q + RI Sbjct: 299 RSKVIEQFNTKTDESKILLLSAKAGGVGLNL-PGASRLVLFDSDWNPASDMQAMARIW-- 355 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V++Y L+ TI+E + QR +K+ + + +++ Sbjct: 356 ---RDGQKKDVYIYRLLTTGTIEEKIYQRQISKAGLSEFVVD 394 >gi|225562673|gb|EEH10952.1| CHR9/SNF2/SWI2 [Ajellomyces capsulatus G186AR] Length = 1032 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 54/171 (31%), Gaps = 17/171 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 QL + + ++ + N ++V H L LQ F Sbjct: 596 RQLYATRDSILNYANHEFCGKWRVLKKLLRWWHGNGDKVLVFSHSVRLLKMLQMLFKHTS 655 Query: 91 --------GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + + +N + + + G GLN+ N +V W+ Sbjct: 656 YNVSYLDGAMSYEDRAKVVDHFNADIREFVFLISTRAGGVGLNITS-ANKVVVVDPNWNP 714 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R V V+ L++ TI+E+V R K + Sbjct: 715 A-----YDLQAQDRAYRIGQARDVEVFRLVSAGTIEEIVYARQIYKQQQAN 760 >gi|198423144|ref|XP_002119349.1| PREDICTED: similar to transcriptional regulator ATRX [Ciona intestinalis] Length = 1357 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 71/203 (34%), Gaps = 19/203 (9%) Query: 8 QRELYCDLQGENIE-------AFNSASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKA 58 + E Y + G+++ + ++ + + + + + + Sbjct: 728 ENEWYSSIVGKDVADDQNAGGKLAVLFEILRLAHECDDKILVFSQSLLSLDLIEEMLALS 787 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-DPCTIQEWNEG---KIPLLFA 114 ++ + I + L G +L K I E+N+ + L Sbjct: 788 TVKVLSQLEDGKISTEIDYRKWYKNLDYFRMDGSSLGKSRQRWINEFNDETDRRARLFLI 847 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G+NL N +V F W+ + + R + G + ++Y LIAQ Sbjct: 848 STKAGSLGVNLVA-ANRVVIFDASWNPSH-----DIQSIFRVYRFGQAKCCYIYRLIAQG 901 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 T++E + R TK ++ +++ Sbjct: 902 TMEEKIYDRQVTKQSLSFRVVDE 924 >gi|189208600|ref|XP_001940633.1| DNA repair and recombination protein RAD26 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976726|gb|EDU43352.1| DNA repair and recombination protein RAD26 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1311 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 67/215 (31%), Gaps = 31/215 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE----------EKHWKE 50 M + K L + A QLA + + + + Sbjct: 585 MVTFQKLANHLALIVPMSTENQEKQAKDLQTL-QLAC-PSTFKDLFQIRDNILVQSQREF 642 Query: 51 VHDEKIKALEVIIEKANAAPIIVAYH-----------FNSDLARLQKAFPQGRTLDK-DP 98 K+ + +N +++ H F+ D + ++ G + Sbjct: 643 CGKWKVLRRLLDFWHSNGDKVLIFSHSVRLLRLLRGLFDVDGTKYNFSYLDGSMKYEDRS 702 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++N + + + G GLN+ N +V W+ + R Sbjct: 703 QAVADFNADPNQFVFLISTKAGGVGLNITS-ANKVVVMDPHWNPA-----YDLQAQDRAY 756 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G R V V+ L++ TI+E+V R K + Sbjct: 757 RIGQTRNVEVFRLVSSGTIEEVVYARQIYKQQQAN 791 >gi|328778981|ref|XP_001121991.2| PREDICTED: lymphoid-specific helicase-like [Apis mellifera] Length = 379 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 66/186 (35%), Gaps = 28/186 (15%) Query: 33 LQLANGAVYYDEEKHWKEVH---------DEKIKALEVIIE--KANAAPIIVAYHFNSDL 81 ++ N + K+ L+ ++ K +++ L Sbjct: 143 KKIVNHPYLIHCPLGPDGLPKIDEELVTSSGKLLVLDAMLARLKKQGHKVLLFSTMTMIL 202 Query: 82 ARLQKAF----------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 ++ L IQ +N +I L + G GLNL G + Sbjct: 203 DVIEDYLSLRDFKYVRLDGSIKLSVRKENIQNFNTNPEIFLFLISTRAGGVGLNL-IGAD 261 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + W+ + ++ + R + G R V +Y L + TIDE+++ R K + Sbjct: 262 TVIIYDSDWNPQ-----VDIQAMARCHRIGQTRPVMIYKLCTKGTIDEVIINRAEAKRLL 316 Query: 191 QDLLLN 196 + ++++ Sbjct: 317 EKVVIS 322 >gi|255716748|ref|XP_002554655.1| KLTH0F10406p [Lachancea thermotolerans] gi|238936038|emb|CAR24218.1| KLTH0F10406p [Lachancea thermotolerans] Length = 765 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 17/138 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPAS 118 IV F S L ++ + T + TI+ + + + Sbjct: 614 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMTPTQRDQTIKYFMENTHCEVFLVSLKA 673 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 674 GGVALNL-CEASQVFIMDPWWNPSVEWQSGDRV-----HRIGQYRPVKITRFCIEDSIES 727 Query: 179 LVLQRLRTKSTIQDLLLN 196 +++ K+ + +N Sbjct: 728 RIIELQEKKANMIHATIN 745 >gi|123977009|ref|XP_001330686.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121897321|gb|EAY02446.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1326 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 71/187 (37%), Gaps = 19/187 (10%) Query: 17 GENIEAFNSASKTVKCLQLANG--AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 IE L G + + + E A++ II+ P +V Sbjct: 1109 EGTIEESGKLVVLRDLLLYTLGFGPGKEEVLRQKVVIFCESESAIKEIIKYV--IPCLVD 1166 Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILV 133 F F + D+ I + P L A ++ GHG+NL N++V Sbjct: 1167 TTFV--------KFDSSLSQDERDKNIDAFMSENGPDLFIATKSAAGHGINLTA-ANVVV 1217 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 FF L W+ I+ R + G K+ V +Y ++ + TIDE + + K I D Sbjct: 1218 FFELNWNPA-----IDLQAEDRVHRIGQKKQVRIYSIVMEGTIDERIENSQKRKKMIMDS 1272 Query: 194 LLNALKK 200 +++ K+ Sbjct: 1273 VIHDQKE 1279 >gi|302658647|ref|XP_003021025.1| hypothetical protein TRV_04890 [Trichophyton verrucosum HKI 0517] gi|291184900|gb|EFE40407.1| hypothetical protein TRV_04890 [Trichophyton verrucosum HKI 0517] Length = 921 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKD 97 KI+AL I+ +A +V + S L ++ + + +D Sbjct: 747 SSSKIQALIKILTAKGQAAGTKTVVFSQWTSFLDLIEPHLVLYNINFARIDGKMNSAQRD 806 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + + ++ A C GLNL N +V WW IE V R Sbjct: 807 AAMSKFSRDSECTVMLASLNVCSVGLNLVA-ANQVVLADSWWAPA-----IEDQAVDRVY 860 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R ++ L+ +N+I++ VL + K + Sbjct: 861 RLGQTRPTTIWRLVMENSIEDRVLDIQKEKRELMSTAFQE 900 Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats. Identities = 3/30 (10%), Positives = 10/30 (33%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEE 45 +G+ + ++ Q+ N + Sbjct: 612 KGKKTTYSHVLEVLLRLRQVCNHWKLCHDR 641 >gi|240279479|gb|EER42984.1| DNA excision repair protein [Ajellomyces capsulatus H143] Length = 979 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 54/171 (31%), Gaps = 17/171 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 QL + + ++ + N ++V H L LQ F Sbjct: 543 RQLYATRDSILNYANHEFCGKWRVLKKLLRWWHGNGDKVLVFSHSVRLLKMLQMLFKHTS 602 Query: 91 --------GRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + + +N + + + G GLN+ N +V W+ Sbjct: 603 YNVSYLDGAMSYEDRAKVVDNFNADIREFVFLISTRAGGVGLNITS-ANKVVVVDPNWNP 661 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R V V+ L++ TI+E+V R K + Sbjct: 662 A-----YDLQAQDRAYRIGQARDVEVFRLVSAGTIEEIVYARQIYKQQQAN 707 >gi|198434690|ref|XP_002126745.1| PREDICTED: similar to DNA excision repair protein ERCC-6-like (ATP-dependent helicase ERCC6-like) (PLK1-interacting checkpoint helicase) (Tumor antigen BJ-HCC-15) [Ciona intestinalis] Length = 1159 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 56/155 (36%), Gaps = 20/155 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPC 99 K++ L ++ + ++ L +Q+ L + Sbjct: 471 SGKLQFLIPLLLRLREEGHRTLIFSMSRKMLNIIQRILMNLKFKVMRMDGLVTKLSEREK 530 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + + + G GL L + +V + W+ Q ++RI + Sbjct: 531 RVKLFQEDSSYSVFLLTTQVGGVGLTLTA-ADRVVIYDPSWNPATDSQAVDRI-----YR 584 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 G K++V VY LI +++E + +R K+++ Sbjct: 585 IGQKKSVAVYRLITCGSVEEKIYRRQIFKNSVIQQ 619 >gi|155121958|gb|ABT13826.1| hypothetical protein MT325_M272L [Paramecium bursaria chlorella virus MT325] Length = 459 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 74/213 (34%), Gaps = 29/213 (13%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK---HWKEVHDEKIK 57 +K Y + G++ ++ Q + + E K+K Sbjct: 237 LKAYKAY---------GDSEGRMEILKTLLRLRQCTANITMVPKNDSKDEFYEGTSTKLK 287 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWN-E 106 LE I+ + ++ HF+ ++ ++ + D+ I+++N + Sbjct: 288 MLEDDIKASPIQKTLIFAHFHKEMTAIKDMLLSNGHKSVSINGNVSGDERVKAIKQFNED 347 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 A+ G GLNLQ + + + W+ E + R + G + V Sbjct: 348 SATNFFIIQIAAGGVGLNLQT-ASRIYINGVDWN-----GTSETQAIARAHRIGQTKPVI 401 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V LI ++ID+ ++ + K +L + Sbjct: 402 VKRLIINDSIDDAIIGLQQKKFGAAADILGDER 434 >gi|50509490|dbj|BAD31171.1| putative DNA repair protein rhp16 [Oryza sativa Japonica Group] Length = 569 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTI 101 D + + ++E +A IV F S L ++ + + ++K Sbjct: 401 DALREEIRNMVEHDGSAKGIVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEKGKAID 460 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N+ + + G LNL + + WW+ +E R + G Sbjct: 461 TFTNDPDCRIFLMSLKAGGVALNLT-VASHVFLMDPWWNPA-----VESQAQDRIHRIGQ 514 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + ++T++E +LQ K + + + Sbjct: 515 FKPIRSMRFVIKDTVEERILQLQEKKRLVFEGTVGD 550 >gi|225680964|gb|EEH19248.1| SNF2 family helicase/ATPase [Paracoccidioides brasiliensis Pb03] Length = 663 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 55/155 (35%), Gaps = 19/155 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCT 100 K+ L ++ K N ++ F + +++ Sbjct: 462 SGKVDKLCELLRRFKENGDRTLIFSQFTMVMDILEHVLQTVQMPFFRLDGSTSVEDRQAI 521 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++E +IP+ + G G+NL N ++ F ++ + + R + Sbjct: 522 LDAFHEQVEIPVFLLSTKAGGAGVNL-ACANKVIIFDSSFNPQ-----EDVQAENRAHRV 575 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G R V V L+ + TI+E + +TK + + Sbjct: 576 GQTREVEVVRLVTRGTIEEQMYALGQTKLALDQRV 610 >gi|47222924|emb|CAF99080.1| unnamed protein product [Tetraodon nigroviridis] Length = 2099 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 66/196 (33%), Gaps = 17/196 (8%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 +E + E +E + L++A + + I+ + +A Sbjct: 1548 KEFVTEADAEILEHSGKMMLLFEILRMAEEVEDKVLVFSQSLISLDLIEDFLELSCRAKD 1607 Query: 69 APIIVAY-----HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCG 120 + Y F + +E+N+ L + Sbjct: 1608 EDKVSPYKGEGKWFR---NIDYYRLDGSTSATTRKKWAEEFNDTSNVRGRLFLISTRAGS 1664 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL N ++ F W+ Q I R+ + G + VFVY +AQ T++E + Sbjct: 1665 LGINLVA-ANRVIIFDASWNPSYDVQSIFRV-----YRFGQHKTVFVYRFLAQGTMEEKI 1718 Query: 181 LQRLRTKSTIQDLLLN 196 R TK ++ +++ Sbjct: 1719 YDRQVTKQSLSFRVVD 1734 >gi|222630854|gb|EEE62986.1| hypothetical protein OsJ_17794 [Oryza sativa Japonica Group] Length = 947 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPC 99 H K++ALE ++ I++ + L L+K F ++ Sbjct: 609 HCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQL 668 Query: 100 TIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N + + G+NL N +V F W+ + + R + Sbjct: 669 LIDEFNRCPSKQVFLISTRAGNLGVNLVS-ANRVVIFDPSWNPAQ-----DLQAQDRSFR 722 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G +R V V+ L+ +++EL+ R K + ++ ++ Sbjct: 723 FGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSG 761 >gi|54025735|ref|YP_119977.1| putative helicase [Nocardia farcinica IFM 10152] gi|54017243|dbj|BAD58613.1| putative helicase [Nocardia farcinica IFM 10152] Length = 575 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 61/206 (29%), Gaps = 21/206 (10%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + D + Q+ N E K+ Sbjct: 348 RVYDTLLQRAVDDGFGAGPQRQSRVLAALTALKQVCNHPGLVTGELDELAGRSGKLDLCT 407 Query: 61 VIIEKA--NAAPIIVAYHFN-----------SDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 I+ NAAP ++ + F G + ++++ Sbjct: 408 DIVAANLDNAAPTLIFTQYRGTGELLVRHLREQFGLAAPFFHGGLNQTERARIVRDFQSP 467 Query: 108 K-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P+L + G GL L + ++ F WW+ +E R + G R V Sbjct: 468 DGPPVLVLSLRAAGTGLTLTRAAD-VIHFDRWWNPA-----VEAQASDRAHRIGQTRTVT 521 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQD 192 V L + T++E + KS + D Sbjct: 522 VTTLTSGTTVEEHIAGMHDRKSALTD 547 >gi|222635334|gb|EEE65466.1| hypothetical protein OsJ_20855 [Oryza sativa Japonica Group] Length = 4273 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 55/158 (34%), Gaps = 20/158 (12%) Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K++ L+ ++ K +++ L ++ + + I Sbjct: 1261 GKLEMLDRLLPKLKATGHRVLLFSTMTRLLDVMEDYLVWKKYKYLRLDGHTSGQERGALI 1320 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++N + + G G+NLQ + ++ F W+ + ++ R + Sbjct: 1321 DKFNNPNSQAFIFLLSIRAGGVGVNLQA-ADTVIIFDTDWNPQ-----VDLQAQARAHRI 1374 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ V V L T++E V K + + + A Sbjct: 1375 GQKKEVLVLRLETVQTVEEQVRASAEHKLGVANQSITA 1412 >gi|242072472|ref|XP_002446172.1| hypothetical protein SORBIDRAFT_06g003030 [Sorghum bicolor] gi|241937355|gb|EES10500.1| hypothetical protein SORBIDRAFT_06g003030 [Sorghum bicolor] Length = 1174 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 60/168 (35%), Gaps = 19/168 (11%) Query: 51 VHDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 K+ L ++++ IV F S L+ F Q Sbjct: 1005 KDSCKVSKLIMMLQSLQKKKEKSIVFSQFTSFFDLLEIPFNQKGIKFLRFDGKLSQKHKE 1064 Query: 99 CTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++E++E + +L + G GLNL + + WW+ +Q I RI Sbjct: 1065 KILKEFSETQDKLVLMMSLKTGGVGLNLTA-ASNVFLMDPWWNPAVEEQAIMRI-----H 1118 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G KR V V I ++T++E + Q K + L + + Sbjct: 1119 RIGQKREVRVKRFIVKDTVEERLQQVQMRKQRMVSGALTDEEIRGARI 1166 Score = 38.6 bits (88), Expect = 0.50, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 44/209 (21%), Gaps = 46/209 (22%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y R N ++ Q + K Sbjct: 840 YEALFRRSKVQFDKFVAQGSVLNNYANVLELLLRLRQCCDHPFLVISRADP-----GKYA 894 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 L+ + A F + + ++E +G Sbjct: 895 DLDQV-----------AQQFLEGVQSFSGRQNVVPSRAYVEEVVEEIRQGATTECPICLE 943 Query: 118 SCGHGLNLQYGGNIL---VFFSLWWDLEEHQQMIER--------IGVTRQRQAGF----- 161 S L + + S W + + R I + Q + Sbjct: 944 SASDDPVLTPCAHRMCRECLLSSWRTPDGGPCPLCRSHISKSDLIILPAQCRFQVDAKNN 1003 Query: 162 -KRAVFVYYLIAQNTIDELVLQRLRTKST 189 K + V LI +LQ L+ K Sbjct: 1004 WKDSCKVSKLIM-------MLQSLQKKKE 1025 >gi|157155470|ref|YP_001461436.1| SNF2 family helicase [Escherichia coli E24377A] gi|157077500|gb|ABV17208.1| helicase, SNF2 family [Escherichia coli E24377A] Length = 1080 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 65/204 (31%), Gaps = 31/204 (15%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 +G + + + E +++ + K+ L I+ + Sbjct: 866 EGMQQAGTGMLGLLHRLKLICAHPAVVNPEPRFRD-NSPKLNWLLKILAELKHTTKDKVI 924 Query: 76 HFNS--DLARLQKAFPQGRTLDK-----------------DPCTIQEWNE-GKIPLLFAH 115 F DL R + + + I ++ ++ Sbjct: 925 IFTELRDLQRELQHAIHQKFGFRPVIINGDTSTKSQSQNSRQRLIDDFQAQPGFGVIILS 984 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN- 174 + G G+N+Q N ++ F+ W+ + E R + G + V+VYY ++ Sbjct: 985 TVAVGFGVNVQK-ANHVIHFTRCWNPAK-----EDQATDRAYRIGQTKDVYVYYPTVKDT 1038 Query: 175 ---TIDELVLQRLRTKSTIQDLLL 195 T +E + L+ + + +L Sbjct: 1039 EITTFEETLDDLLQRRRALARDML 1062 >gi|310795289|gb|EFQ30750.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 903 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDP 98 K +AL I++ K + +I+ + S L +Q T K Sbjct: 730 KSSKTEALLKILQATTKDPKSKVIIFSQWTSFLTIIQNQLVEAGYKFARIDGSMTASKRD 789 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + + ++ A A C GLNL + ++ WW IE V R Sbjct: 790 AAIHALDHDPDTRVMLASLAVCSVGLNLVA-ADTVILADSWWAPA-----IEDQAVDRVH 843 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G KR V+ L+ + T++E VL K T+ K Sbjct: 844 RLGQKRPTTVWRLVMEGTVEERVLDIQHEKRTLVGKAFQEKNK 886 Score = 36.3 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 14/49 (28%), Gaps = 7/49 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAF-------NSASKTVKCLQLANGAVYYD 43 ++Y E L+ A N + ++ Q+ N Sbjct: 576 RKYDALLSEAQVALKDYQANASGVKGQFQNVLERLLRLRQVCNHWTLCR 624 >gi|183234185|ref|XP_650328.2| DNA repair protein [Entamoeba histolytica HM-1:IMSS] gi|169801218|gb|EAL44942.2| DNA repair protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 764 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 81/237 (34%), Gaps = 50/237 (21%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------- 52 +K Y +E L+ + ++ ++ +L N + +++ Sbjct: 449 IKLYKIMLKE----LEKKKLDQCSALKYIQLFTKLCNHPSLISKYLTEEKISLNENDEKC 504 Query: 53 ----------DEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR------- 92 K I++ + +++ ++ L + F Q Sbjct: 505 IKGISLNEESSNKFNITIQFIKEILIKSKEKVVLVSNYTKTLDLFEIYFKQEEEYKQKKI 564 Query: 93 ----------TLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + +++ N+ +L + G GLNL G + L+ F W+ Sbjct: 565 FNYLRLDGKTSQKQRDIIVEKINDKSSNYNILLLSSKAGGVGLNL-IGCSRLILFDPDWN 623 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + ++ + R + G ++ +Y ++ TI+E + QR K+ I + ++ Sbjct: 624 PAK-----DKQAMARIWRDGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEE 675 >gi|260942529|ref|XP_002615563.1| hypothetical protein CLUG_04445 [Clavispora lusitaniae ATCC 42720] gi|238850853|gb|EEQ40317.1| hypothetical protein CLUG_04445 [Clavispora lusitaniae ATCC 42720] Length = 819 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 49/155 (31%), Gaps = 17/155 (10%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIP 110 + + IV F S L ++ + +D + Sbjct: 660 LRSDRHTIKSIVFSQFTSMLDLIEWRLKRAGFETVKLQGSMSPQQRDRTIKHFMENTNVE 719 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G LNL + + WW+ Q ++R+ + G KR + + Sbjct: 720 IFLVSLKAGGVALNL-CEASQVFLMDPWWNPSVEWQSMDRV-----HRIGQKRPIRITRF 773 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +++I+ +++ K+ + +N + Sbjct: 774 CIEDSIESKIIELQEKKANMIHATINHDDAAVNRL 808 Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 24/94 (25%), Gaps = 5/94 (5%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +R+ + + N + + QLA+ + V E + Sbjct: 503 LYSDSKRKFNDYVAEGVVLNNYANIFTLITRMRQLADHPDLVLKRVGSNAVSSEVDGVIM 562 Query: 61 VIIEKANAAPII---VAYHFNSDLARLQKAFPQG 91 + A I + F R G Sbjct: 563 CQLCDDEAEEPIESKCHHRFCRMCIREYCESFSG 596 >gi|170102282|ref|XP_001882357.1| SNF2 superfamily protein [Laccaria bicolor S238N-H82] gi|164642729|gb|EDR06984.1| SNF2 superfamily protein [Laccaria bicolor S238N-H82] Length = 1341 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 55/172 (31%), Gaps = 21/172 (12%) Query: 47 HWKEVHDEKIKALEV---------------IIEKANAAPIIVAYHFNSDLARLQKAFPQG 91 K + K+K + II + +V+ + K Sbjct: 1153 MPKFLPSTKMKFMMEVLIKGIEKRPEEKTLIISQWTGCLSLVSAYLTEKGIIHVKYQGDM 1212 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D ++ K ++ G GLNL N ++ L W + IE Sbjct: 1213 NRNKRDQAVRVFMSKDKARVMLMSLKCGGVGLNLTR-ANNVISLDLGWS-----RAIEDQ 1266 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G R V V L+ +T+++ +L K ++ D L I Sbjct: 1267 AFDRVHRLGQTRPVEVQRLVIADTVEDRLLNIQERKQSLADGSLGEGTGRKI 1318 >gi|300121090|emb|CBK21472.2| unnamed protein product [Blastocystis hominis] Length = 1183 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 64/200 (32%), Gaps = 40/200 (20%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALE----------------------VIIEKAN 67 ++ + N + + + +K + +E + KA Sbjct: 440 MQFRKCCNHPYMLEGVEEMESEELKKAEEMEFKDLTKHPLVQSSGKMVLLHKLLGKLKAE 499 Query: 68 AAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWNEGKIP--LLFAH 115 +++ F + L L++ + I+ +N+ Sbjct: 500 GHRVLIFSQFTTMLDILERYLRLAGLSYTRIDGSVRGNAREEAIRTFNDENSNMFCFLLS 559 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+ L + ++ F W+ + + R + G +AV VY LI + T Sbjct: 560 TRAGGVGITLTT-ADTVIIFDSDWNPQN-----DVQAQARCHRIGQTKAVRVYRLITRGT 613 Query: 176 IDELVLQRLRTKSTIQDLLL 195 + + QR K ++ ++ Sbjct: 614 YEAAMFQRASLKLGLEQAVM 633 >gi|294656125|ref|XP_002770225.1| DEHA2C15774p [Debaryomyces hansenii CBS767] gi|199430877|emb|CAR65588.1| DEHA2C15774p [Debaryomyces hansenii] Length = 1100 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KD 97 ++ KI L I++K +++ F L L+K + Sbjct: 925 LNGGKISKLIEILDKIINKKEKVLIFSLFTQMLDILEKVLTISNMKFLRLDGQTSVDTRQ 984 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++ IP+ + G G+NL N ++ F ++ + ++ R Sbjct: 985 DLIDKFYDDETIPVFLLSTKAGGFGINLVA-ANHVIIFDQSFNPHD-----DKQAEDRAH 1038 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G V V LIA+NTI+E +LQ K + + Sbjct: 1039 RVGQTSEVVVTKLIAKNTIEENMLQLAENKLQLDQSI 1075 >gi|324501030|gb|ADY40465.1| Transcription termination factor 2 [Ascaris suum] Length = 1277 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 64/183 (34%), Gaps = 20/183 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR 92 +A+G E K+ AL +++A ++ + S L ++ Q Sbjct: 1053 IADGHQGNVEYLFEAPFQSAKLVALFERLDQALALGDKCVIVSQWTSLLDIVEYHLKQRD 1112 Query: 93 TLD----------KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ +N G ++ G GGN L L W+ Sbjct: 1113 VQYTSITGKVLTKDRQPRVESFNRVGGGARVMLLSLT-AGGVGLNLVGGNHLFLIDLHWN 1171 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 QQ +RI + G + VF++ +I TI+E VL ++K + +L Sbjct: 1172 PALEQQACDRI-----YRMGQTKEVFIHKIICLGTIEERVLTLQQSKMALAKGVLEGAAS 1226 Query: 201 ETI 203 + + Sbjct: 1227 KKL 1229 >gi|218199702|gb|EEC82129.1| hypothetical protein OsI_26164 [Oryza sativa Indica Group] Length = 816 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 37/107 (34%), Gaps = 6/107 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++K N+ + + G LNL + + WW+ +E Sbjct: 697 MNIVEKGKAIDTFTNDPDCRIFLMSLKAGGVALNLT-VASHVFLMDPWWNPA-----VES 750 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + + + ++T++E +LQ K + + + Sbjct: 751 QAQDRIHRIGQFKPIRSMRFVIKDTVEERILQLQEKKRLVFEGTVGD 797 >gi|115334540|dbj|BAF33260.1| chromodomain helicase DNA binding protein 1 [Struthio camelus] Length = 301 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 8/104 (7%) Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 31 RNQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 84 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V +Y L+ + +++E +L+R + K + L++ + Sbjct: 85 RAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 128 >gi|157126405|ref|XP_001654622.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti] gi|108873308|gb|EAT37533.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti] Length = 1374 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 76/208 (36%), Gaps = 28/208 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD------EKIKALEVI 62 +++ E++ N + L++ E+ + ++ + Sbjct: 835 KQIISKDDLESLYPSNKMILLFEILRMC------QEKGEKCLIFSGFVMVLNMVEYFMKM 888 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQEWNEGK---IPLLFA 114 I++ + P Y + + G + I ++N+ K + Sbjct: 889 IDEQSKNPKAHLYGLSRFRGPWRPGMDYYRLDGGTSKSTRHEMINKFNDPKNRVTRVFLI 948 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL G N +V W+ QQ I RI + G ++ ++Y L+A + Sbjct: 949 STKAGGQGINL-VGANRVVILDTSWNPAVDQQGIFRI-----YRLGQQKPCYIYRLLAIH 1002 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 T++E V R TK + + A KK+ Sbjct: 1003 TMEEKVYSRAVTKQAMSHRV--ADKKQV 1028 >gi|224132088|ref|XP_002328182.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222837697|gb|EEE76062.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 896 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 62/177 (35%), Gaps = 17/177 (9%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT------ 93 D EK+W E E+ I + + + I+ + + L LQ + Sbjct: 718 FQIDIEKNWVESSKIVALLQELEILRLSGSKSILFSQWTAFLDLLQIPLSRSNISFVRLD 777 Query: 94 ----LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + I+++ + I +L + G G+NL + WW+ +Q + Sbjct: 778 GTLNQQQRERVIKQFSEDDSILVLLMSLKAGGVGINLTA-ASNAFVMDPWWNPAVEEQAV 836 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RI + G + V + I + T++E + K + L + T + Sbjct: 837 MRI-----HRIGQTKRVMIRRFIVKGTVEERMEAVQARKQLMISGALTDQEVRTARI 888 Score = 40.5 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 20/198 (10%), Positives = 48/198 (24%), Gaps = 36/198 (18%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD---- 53 Y ++ + ++ Q + +E D Sbjct: 562 YEALFKKSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKL 621 Query: 54 -EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 ++ + I+ + A + + + L K G+ P+ Sbjct: 622 AKRFLKGDQIVLEGEAINVPSRAYIKEVVEELSKGEQ-----------------GECPIC 664 Query: 113 FAHPASCGHGLNLQYGGNIL---VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L + L + W + + R +TRQ Sbjct: 665 L----EACEDAVLTPCAHRLCRECLLASWRNASSGLCPVCRKAITRQELITAPTDSRFQI 720 Query: 170 LIAQNTID-ELVLQRLRT 186 I +N ++ ++ L+ Sbjct: 721 DIEKNWVESSKIVALLQE 738 >gi|167517701|ref|XP_001743191.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778290|gb|EDQ91905.1| predicted protein [Monosiga brevicollis MX1] Length = 102 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 NS + + ++ + I ++N I G G+NL G + +V F Sbjct: 1 NSFMCSMICRMDGMTSIKRRQPLIAQFNSNPSIFTFVLTTRVGGLGVNLT-GADRVVIFD 59 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 W+ + R + G RAV VY L+ TI+E + R Sbjct: 60 PDWNPST-----DVQARERAWRIGQSRAVAVYRLLCAGTIEEKIYHRQ 102 >gi|302795003|ref|XP_002979265.1| hypothetical protein SELMODRAFT_110395 [Selaginella moellendorffii] gi|300153033|gb|EFJ19673.1| hypothetical protein SELMODRAFT_110395 [Selaginella moellendorffii] Length = 684 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 64/190 (33%), Gaps = 31/190 (16%) Query: 30 VKCLQLANGAVYYDEEKHWKEV---------HDEKIKALEVIIE---KANAAPIIVAYHF 77 ++ + N +E + K+K L + K+ +++ Sbjct: 416 MQLRKNCNHPDLLRQEFNQDYDWPPVEQLTAECGKLKFLLDRLLPPLKSRGHRVLIFSQM 475 Query: 78 NSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 L L+ + + I EG + + G G+NL Sbjct: 476 TKMLDILEFCLGERGMPPFRLDGNVKQEDRQEQVITFSREGF--VFLLSTRAGGLGINLT 533 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + + W+ + ++ + R + G R V VY L ++++ +L+ + Sbjct: 534 S-ADTAIIYDSDWNPQ-----MDLQAMDRCHRIGQTRPVHVYRLATAHSVECRMLKVANS 587 Query: 187 KSTIQDLLLN 196 K ++ L++N Sbjct: 588 KLQLETLVIN 597 >gi|260174930|ref|ZP_05761342.1| helicase domain-containing protein [Bacteroides sp. D2] gi|315923171|ref|ZP_07919411.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313697046|gb|EFS33881.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 557 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 67/207 (32%), Gaps = 21/207 (10%) Query: 2 KQYHKFQRELYCDL------QGENIEAF---NSASKTVKCLQLANGAVYYDEEKHWKEVH 52 K+Y +R+L L E IE + Q++ + V Sbjct: 340 KEYVDAERDLIMYLQKYKDADDEKIEKALRGEVMVRINILRQIS---ARGKVRDVIEFVK 396 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 D + ++I+ + V + K N K ++ Sbjct: 397 DFRENGKKIILFCSLHE---VVDQLKRYFPTAVSVTGRDSQDVKQRAVDAFQNNPKTDII 453 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL L N + F W + Q +R + G K +V YY + Sbjct: 454 ICSIKAAGVGLTLTASSN-VAFVEFPWTYADCCQCEDR-----AHRIGQKDSVTCYYFLG 507 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 + TIDE V + ++ K I + + + + Sbjct: 508 RRTIDEKVYRIIQEKKNIANAVTGSTE 534 >gi|224133490|ref|XP_002328055.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222837464|gb|EEE75843.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 843 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDK---------DP 98 H K++ALE ++ + I++ + L + +G + + Sbjct: 512 KHCGKMQALEKLMFSWASRGDKILLFSYSVRMLDILEKFLIRKGHSFSRLDGSTPTNLRQ 571 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++N + + G GLNL N +V F W+ + + R Sbjct: 572 SLVDDFNSSPSKQVFLISTRAGGLGLNLVS-ANRVVIFDPNWNPAQ-----DLQAQDRSF 625 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR V V+ L+A + +ELV R K + ++ ++ Sbjct: 626 RFGQKRHVVVFRLLAAGSFEELVYSRQVYKQQLSNIAVSG 665 >gi|167517741|ref|XP_001743211.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778310|gb|EDQ91925.1| predicted protein [Monosiga brevicollis MX1] Length = 689 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 56/207 (27%), Gaps = 50/207 (24%) Query: 32 CLQLANGAVYYDEEKHWKEVHDE--------------------------------KIKAL 59 QL+N EV K+ L Sbjct: 447 LRQLSNHPALLLPRADDDEVVRAELSEKVFEPEDPWMQSMLRNQLTSAGDTSVCGKLAIL 506 Query: 60 EVII--EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 ++ + +++ + L R + + ++ Sbjct: 507 MQLLARWEKEQLSVVIFSYTTRLLNIIQDALSLQGRTPLRIDGQVSARDRHAVVAKFQAR 566 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + G G+NLQ + +V W+ + R + G + V V Sbjct: 567 DERILLVSTHAGGEGINLQA-ASKVVIVDPCWNPAR-----DLQAQDRAYRLGTEHDVEV 620 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 L+ T++ELV R K + ++ Sbjct: 621 LRLVTAGTLEELVYARQVYKLQLARMV 647 >gi|134056267|emb|CAK96395.1| unnamed protein product [Aspergillus niger] Length = 1151 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 62/188 (32%), Gaps = 22/188 (11%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN-------------- 78 Q+ +G + V + ++ + + I + F+ Sbjct: 958 CQVCDGWMPASYSTITALV-TQLLETADESKNQGPGERPIKSVVFSAWTSHLDLIEIALR 1016 Query: 79 -SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D+ + + + N I +L A + G GLNL + + Sbjct: 1017 DHDITGFTRLDGTMSLAARSKALEELHNNPDITVLLATIGAGGVGLNLTA-ASKVYIMEP 1075 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ Q ++R+ + G R V + + +I+E + + + K + DL LN Sbjct: 1076 QYNPAAVAQAVDRV-----HRIGQTREVTTVQFLMKGSIEEKIFELAKKKQQLADLSLNR 1130 Query: 198 LKKETIHV 205 K + V Sbjct: 1131 GKLDKKEV 1138 >gi|290982366|ref|XP_002673901.1| predicted protein [Naegleria gruberi] gi|284087488|gb|EFC41157.1| predicted protein [Naegleria gruberi] Length = 873 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 65/177 (36%), Gaps = 23/177 (12%) Query: 38 GAVYYDEEKHWKEVHD---EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ-- 90 KE H K+ L+ ++ + +++ +F S L ++K Sbjct: 584 HFPSDYNPNDKKEYHSQYSGKLLVLDNLLREIREVGDRVVIVSNFKSILNEIEKLCKIRD 643 Query: 91 --------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +K + +N K + + G GLNL G N L+ W+ Sbjct: 644 YPLSRLDGSTQSEKRMVIVNSFNSPKSNDFIFLLSSKAGGCGLNL-IGANRLIMIDPDWN 702 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K++VF+Y +I TI+E + QR K+ + L+ Sbjct: 703 PSN-----DEQAMARVWRDGQKKSVFIYRMIGCGTIEEKIFQRQIVKTGLSKSTLDE 754 >gi|207347991|gb|EDZ73985.1| YAL019Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 516 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 68/189 (35%), Gaps = 23/189 (12%) Query: 32 CLQLANGAVYY---DEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQ 85 +L + + + + KI AL+ +++ +++ F L L+ Sbjct: 309 LHKLCCNFPNTLSKYQLHNDEWMQSGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILE 368 Query: 86 K----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++ I ++ + IP+ + G G+NL N ++ Sbjct: 369 MVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINL-VCANNVII 427 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F ++ + +R R + G + V + LI +++I+E + Q + K + + Sbjct: 428 FDQSFNPHD-----DRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYI 482 Query: 195 LNALKKETI 203 K + + Sbjct: 483 SEDKKSQDV 491 >gi|195395955|ref|XP_002056599.1| GJ10137 [Drosophila virilis] gi|194143308|gb|EDW59711.1| GJ10137 [Drosophila virilis] Length = 1061 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 21/159 (13%) Query: 52 HDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K+ + I++ + IV + S L L + + Sbjct: 890 PSSKMLKVLEILKTNVLKSKDKAIVVSQWTSVLDILGDLLEKERLQTLSLNGAIPVKNRQ 949 Query: 99 CTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+N+ +L + G GLNL G N L+ F L W+ + E R Sbjct: 950 DIVNEFNDERNPKRILLLSLTAGGVGLNL-IGANHLILFDLHWNPQL-----EAQAQDRI 1003 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V +Y ++ +T+++ + K + D +L Sbjct: 1004 YRVGQKKDVIIYKIVCLDTVEQRIKALQDRKLELADGVL 1042 Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 4/72 (5%), Positives = 18/72 (25%), Gaps = 6/72 (8%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------VHDEKIK 57 Y ++ + +++ ++ Q+ D + + Sbjct: 773 YKMHEKFSRMAGHSKEVKSHEILVLLLRLRQICCHPGLIDSMLEEEGAANLGHDDSDSYT 832 Query: 58 ALEVIIEKANAA 69 ++ + N Sbjct: 833 PEIDLLAQLNKM 844 >gi|50304963|ref|XP_452439.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641572|emb|CAH01290.1| KLLA0C05368p [Kluyveromyces lactis] Length = 1605 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 70/195 (35%), Gaps = 16/195 (8%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y K E L+ + S ++ K K+V D VI Sbjct: 1401 EYDKMVAEQKARLKNGYTIDYKSLKESKK---------VEMCLDIIKKVTDSNTDEKLVI 1451 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGH 121 + I+ + +L + + + I+ + + ++ + Sbjct: 1452 FSQFTMFFEILGHFIKKNLGLNFLRYDGSMSSSQRSACIESFYQDNNYRVMLISMKAGNS 1511 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GL L N ++ +W+ +E + R + +R V+V+ L+ + ++++ ++ Sbjct: 1512 GLTLT-CANHVILADPFWNP-----FVEEQAMDRCHRISQEREVYVHRLLIKMSVEDRIV 1565 Query: 182 QRLRTKSTIQDLLLN 196 + K T+ +L ++ Sbjct: 1566 ELQNKKKTLVNLAMD 1580 >gi|189190492|ref|XP_001931585.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973191|gb|EDU40690.1| helicase SWR1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1030 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 17/150 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKI 109 + K IV F S L ++ T + +I + + Sbjct: 869 KLRSKKQTLKSIVFSQFTSMLQLIEWRLRRAGFNTVMLDGSMTPAQRQKSIDHFMTNPDV 928 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 929 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 982 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 L +++++ ++ K+ + +N K Sbjct: 983 LCVEDSVESRMVALQEKKAAMIAGTINNDK 1012 >gi|145513841|ref|XP_001442831.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124410192|emb|CAK75434.1| unnamed protein product [Paramecium tetraurelia] Length = 1024 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 28/218 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEV------HD 53 K Y + + ++ ++ + A + ++ ++ N + V Sbjct: 615 KIYDQINQRGVMTFDQQSGKSGSQALQNLMMQLRKICNHPYLFMLNLDMNRVTDEIWRSS 674 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K + L+ II K +++ + ++ F + I Sbjct: 675 GKFELLDRIIPKLLYFKHRLLIFSQMTQLMDIMEAFFEYRGWRYLRLDGSTKSEDRESRI 734 Query: 102 QEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 Q +N + + G GLNLQ + +V F W+ M++ R + Sbjct: 735 QLFNQENSIYNIFLLSTRAGGLGLNLQS-ADTVVLFDSDWNP-----MMDLQAQDRAYRI 788 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K V V LI I+ +L + K + +++ A Sbjct: 789 GQKNEVRVLRLITATQIEGNILSKAEHKMGLDAVIIQA 826 >gi|284034556|ref|YP_003384487.1| SNF2-like protein [Kribbella flavida DSM 17836] gi|283813849|gb|ADB35688.1| SNF2-related protein [Kribbella flavida DSM 17836] Length = 742 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 69/175 (39%), Gaps = 27/175 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 ++ Q A ++ K++ + I+E+ + ++V +F + L R+++ Sbjct: 530 LMRMRQAA-----------FEVAGSAKLERIAEIVEEAREDGRKVVVFSYFLTVLDRIEQ 578 Query: 87 AFPQGRTLDK-------DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 A + + E+ +L + + G GLN+Q ++++ Sbjct: 579 AVGPTTGSIRGAVGPTERQRLVDEFTAAPGHAVLLSQIEAGGVGLNMQA-ASVVILAEPH 637 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 W Q V R + G R V V+ L+A++T+D+ + + K + D Sbjct: 638 WKPSTEQ-----QAVARAHRMGQIRTVQVHRLLAKDTVDDRIREVQEHKRLLFDE 687 >gi|134055452|emb|CAK43967.1| unnamed protein product [Aspergillus niger] Length = 1670 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 71/209 (33%), Gaps = 31/209 (14%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDE-----------EKHWKEVHDEKIKALEVIIEKA 66 + E N + ++ + Y K + LE+++ K Sbjct: 913 KQTEKHNLNNILMQLRKCLCHPFVYSRAIEEKTSNAAVSHRHLVDAAAKFQLLELMLPKL 972 Query: 67 N--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLL-- 112 +++ F +L ++ + + TI +N + P Sbjct: 973 KNRGHRVLIFSQFLENLDIIEDFLEGVGLTYLRLDGRMSSLEKQKTIDAYNAEESPYFAF 1032 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G G+NL + ++ ++ + ++R + G K V V+ L+ Sbjct: 1033 LLSTRSGGVGINL-ATADTVIIMDPDFNPHQDM-----QALSRAHRIGQKNKVLVFQLMT 1086 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + +E ++Q + K + +L++ + E Sbjct: 1087 RASAEEKIMQIGKKKMVLDHVLIDRMVSE 1115 >gi|213401963|ref|XP_002171754.1| ATP-dependent helicase RIS1 [Schizosaccharomyces japonicus yFS275] gi|211999801|gb|EEB05461.1| ATP-dependent helicase RIS1 [Schizosaccharomyces japonicus yFS275] Length = 954 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 54/164 (32%), Gaps = 21/164 (12%) Query: 49 KEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQKA----------FPQGRTL 94 + V KI+ II + +++ F L + G Sbjct: 769 QWVTSTKIEKALEIINDIHKKHPSDKVLLFSQFVPFLELFMVPLTQKGLKFIAYNGGMNA 828 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + + + +L + GLNL N ++ +W+ +E + Sbjct: 829 AQRNDALTAFETDPDAIVLLISLKAGNVGLNLT-CANHVIVLDPFWNP-----FVEDQAI 882 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + + V+ +I TI+E V+ K + + + Sbjct: 883 DRAHRIGQTKDITVHRVIVGETIEERVVALQNKKRELINGAMGE 926 Score = 35.1 bits (79), Expect = 5.3, Method: Composition-based stats. Identities = 2/61 (3%), Positives = 18/61 (29%), Gaps = 2/61 (3%) Query: 10 ELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 ++ ++ + + + ++ Q + + +D + + ++ Sbjct: 582 QMRKFMKEGTVVSHYGSILVLLLRLRQACCHPWLVVAREATADDNDGFRREKLALFKQLP 641 Query: 68 A 68 Sbjct: 642 K 642 >gi|115472329|ref|NP_001059763.1| Os07g0511500 [Oryza sativa Japonica Group] gi|113611299|dbj|BAF21677.1| Os07g0511500 [Oryza sativa Japonica Group] Length = 635 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTI 101 D + + ++E +A IV F S L ++ + + ++K Sbjct: 467 DALREEIRNMVEHDGSAKGIVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEKGKAID 526 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N+ + + G LNL + + WW+ +E R + G Sbjct: 527 TFTNDPDCRIFLMSLKAGGVALNLT-VASHVFLMDPWWNPA-----VESQAQDRIHRIGQ 580 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + ++T++E +LQ K + + + Sbjct: 581 FKPIRSMRFVIKDTVEERILQLQEKKRLVFEGTVGD 616 >gi|327266997|ref|XP_003218289.1| PREDICTED: helicase-like transcription factor-like [Anolis carolinensis] Length = 978 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 55/157 (35%), Gaps = 19/157 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ 102 + + AL + ++ ++ F L+ ++ + T K I+ Sbjct: 809 NALMHALIELRKQNPTVKSLIISQFTKFLSLIEIPLKESGFAFTRLDGSMTRKKRVEAIR 868 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 869 HFQSNETGSPTVMLLSLKAGGVGLNLTA-ASRVFLMDPAWNPAAEDQCFDRC-----HRL 922 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ V + I +N+++E +L+ K + L Sbjct: 923 GQKQDVIITKFIVKNSVEENMLKIQHKKRELAARALG 959 >gi|326512362|dbj|BAJ99536.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 826 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 17/197 (8%), Positives = 57/197 (28%), Gaps = 39/197 (19%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA----------------API 71 ++ + + + + + + Sbjct: 553 LLIQLRKNCGHPDLF-----HSAFDSNSLYPPVDKLMEQCGKFQLLDRLLDALIKRNHKV 607 Query: 72 IVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASC 119 ++ + L L+ I +N+ + + + Sbjct: 608 LIFSQWTKILDILDYYLSEKGLKVCRIDGSVKLEDRRNQIAAFNDLNSGMNVFILSTRAG 667 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + + + W+ + ++ + R + G + V VY L N+++ Sbjct: 668 GLGINLTS-ADTCILYDSDWNPQ-----MDLQAMDRCHRIGQTQPVHVYRLATSNSVEGR 721 Query: 180 VLQRLRTKSTIQDLLLN 196 ++++ K ++ +++ Sbjct: 722 IIKKAFGKLKLEHVVIG 738 >gi|324500516|gb|ADY40241.1| Transcriptional regulator ATRX [Ascaris suum] Length = 1617 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 64/203 (31%), Gaps = 28/203 (13%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA- 69 L + + N +Q+ +E V + I++L +I + Sbjct: 1187 LVTEADENDFSLSNKLML---LVQIV---KKCEEIGDKILVFSQSIESLTLIKRMLHYMD 1240 Query: 70 -PIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNEGK---IPLLFA 114 + + + R K ++N L+ Sbjct: 1241 SHDLWFSDGHEAIKSANETWGWIEGRDYMVIDGQVQSGKRQEVQTKFNNPNNLRARLMLI 1300 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G N+ N ++ F W+ + + R + G + V++Y IAQ Sbjct: 1301 STRAGSLGTNMVA-ANRVIIFDACWNPSH-----DTQSLFRVYRFGQTKPVYIYRFIAQG 1354 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 T++E + +R TK + +++ Sbjct: 1355 TMEERIYKRQVTKESTALRVIDE 1377 >gi|167521105|ref|XP_001744891.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776505|gb|EDQ90124.1| predicted protein [Monosiga brevicollis MX1] Length = 1094 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 8/101 (7%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I + + G GLNL + ++ WW +E + R + G + V Sbjct: 990 DLIEVFLMTLRTGGVGLNLTA-ASHVILVDPWWSPA-----VEAQAIDRVHRIGQDKPVT 1043 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL--NALKKETIHV 205 + I +++I+E +L + K + L NA +++ + Sbjct: 1044 IKRYIMRDSIEERILALQKRKRALVHSALTRNATERQAERM 1084 >gi|328779113|ref|XP_392959.4| PREDICTED: Rad54 protein isoform 1 [Apis mellifera] Length = 741 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 69/218 (31%), Gaps = 48/218 (22%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEE---------------------KHWKEVHD 53 + E+ ++ S +L N E+ K Sbjct: 442 FKKGKRESLSTLSAITLLKKLCNHPDLVYEKILEKSDGFENAAKLIPSNYSTKEILPELS 501 Query: 54 EKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCT 100 K+ L+ ++ I++ ++ L +K + T+ K Sbjct: 502 GKLMVLDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCYKRCYNYVRLDGTMTIKKRSKV 561 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +N+ + + G GLNL G N LV F W+ + + R + Sbjct: 562 VERFNDSNSNDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN-----DDQAMARVWR 615 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K+ F TI+E + QR K + +++ Sbjct: 616 DGQKKPCF------TGTIEEKIFQRQAHKKALSSTVVD 647 >gi|323454465|gb|EGB10335.1| hypothetical protein AURANDRAFT_52962 [Aureococcus anophagefferens] Length = 258 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 7/89 (7%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L + G G+NL G N +V F + W+ +R + R + G KR VFVY Sbjct: 82 CDVLLMSIKAGGEGINLT-GANRVVLFDVCWNP-----CFDRQAMCRAHRFGQKRPVFVY 135 Query: 169 YLIA-QNTIDELVLQRLRTKSTIQDLLLN 196 L+A + T++ VL++ R K + ++ Sbjct: 136 RLVAPRGTMEAKVLRQQRRKELLVREVVE 164 >gi|322707220|gb|EFY98799.1| chromatin-remodeling complex ATPase chain isw-1 [Metarhizium anisopliae ARSEF 23] Length = 1679 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 6/148 (4%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + + D K +V++ + + + RL + K I+++N Sbjct: 1171 QILDDAKRSKDKVLVFSHSIPTLNYLSGLFQEQKRLFSRLDGKTPIAKRQEEIKKFNANH 1230 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLN+Q G N +V W+ Q + R + G + V VY Sbjct: 1231 TEVYLISTRAGGVGLNIQ-GANKVVILDSKWNPVHEQ-----QAIGRSYRIGQSKPVSVY 1284 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y + T ++ + R K+ + +++ Sbjct: 1285 YFVTAGTFEQDLHGRAIFKTQLATRVVD 1312 >gi|226497978|ref|NP_001141839.1| chromatin complex subunit A 101 [Zea mays] gi|224029693|gb|ACN33922.1| unknown [Zea mays] Length = 837 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 68/193 (35%), Gaps = 29/193 (15%) Query: 27 SKTVKCLQLANGA-----------VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 S ++ + +Y K ++ ++ + A +++ Sbjct: 561 SLFIQLRKNCAHPDLLEAAFGTTSLYPPVNKLLEQCGKFQLLDRLLTSLLARKHKVLIFS 620 Query: 76 HFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGL 123 + L L+ L++ I E+N+ + + + G G+ Sbjct: 621 QWTKVLDILEYYLDSKGLGVCRIDGSVNLEERRRQIAEFNDLNSSLNVFILSTRAGGLGI 680 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + + + W+ + +++ + R + G R V VY L +++E ++++ Sbjct: 681 NLTS-ADTCILYDSDWNPQ-----MDQQAMDRCHRIGQTRPVHVYRLATSYSVEERIIKK 734 Query: 184 LRTKSTIQDLLLN 196 K ++ +++ Sbjct: 735 AFGKLKLEHVVIG 747 >gi|324500492|gb|ADY40232.1| Transcriptional regulator ATRX [Ascaris suum] Length = 1681 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 64/203 (31%), Gaps = 28/203 (13%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA- 69 L + + N +Q+ +E V + I++L +I + Sbjct: 1251 LVTEADENDFSLSNKLML---LVQIV---KKCEEIGDKILVFSQSIESLTLIKRMLHYMD 1304 Query: 70 -PIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNEGK---IPLLFA 114 + + + R K ++N L+ Sbjct: 1305 SHDLWFSDGHEAIKSANETWGWIEGRDYMVIDGQVQSGKRQEVQTKFNNPNNLRARLMLI 1364 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G N+ N ++ F W+ + + R + G + V++Y IAQ Sbjct: 1365 STRAGSLGTNMVA-ANRVIIFDACWNPSH-----DTQSLFRVYRFGQTKPVYIYRFIAQG 1418 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 T++E + +R TK + +++ Sbjct: 1419 TMEERIYKRQVTKESTALRVIDE 1441 >gi|321470001|gb|EFX80979.1| hypothetical protein DAPPUDRAFT_21484 [Daphnia pulex] Length = 665 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 72/214 (33%), Gaps = 53/214 (24%) Query: 38 GAVYYDEEKHW-----KEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ 90 + + + K++ L+ ++ + +++ L L+ Sbjct: 13 HPIQSAMMTQFPDPRLIQYDCGKLQTLDNLLRQLKVGKHRVLIFTQMTRMLDVLESFLNH 72 Query: 91 GRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + ++ +N + +I S G G+NL G + ++F+ W Sbjct: 73 HGHIYLRLDGTTRVDQRQVLMERFNADRRIFCFILSTRSGGVGVNLT-GADTVIFYDSDW 131 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVY----------------------YLIAQNTID 177 + ++ R + G R V +Y LI++ T++ Sbjct: 132 NPT-----MDAQAQDRCHRIGQTRDVHIYRRVHKFYIAYPLFIDSLLFHFSRLISERTVE 186 Query: 178 ELVLQRLRTKSTIQDLLLNA-------LKKETIH 204 E +L++ K + D+ + KK+TIH Sbjct: 187 ENILKKANQKRLLGDIAIEGGNFTAATFKKQTIH 220 >gi|313211798|emb|CBY15966.1| unnamed protein product [Oikopleura dioica] Length = 602 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 67/217 (30%), Gaps = 38/217 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKH------------WKEVHD 53 + R+ + + K QL + + +E+ K + Sbjct: 125 QRVRDALLE-------GAHCFGILAKLRQLVSHPYFVGDEETGKITEEQISRSIKKPLIS 177 Query: 54 EKIKALEVII--EKANAAPIIVAY-------HFNSDLARLQKA---FPQGRTLDKDPCTI 101 K++AL ++ + ++V R + I Sbjct: 178 GKMQALLSLLGGWRKQKRKVLVFCQCLPSLKMIVGMCNRNYVPVLSIYGQTPVSTRQMLI 237 Query: 102 QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N+ + G GLN+ G V F W+ + + R + Sbjct: 238 NEFNDSPDAFAMVMTSRVGGVGLNIH-GATRTVIFEPDWNPGQ-----DEQAAARIHRPQ 291 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y LI ++I+E + QR K ++ +L+ Sbjct: 292 QTDNVAIYRLITNDSIEEWIYQRQIYKHSVAQHVLSD 328 >gi|320591376|gb|EFX03815.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 978 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 43/144 (29%), Gaps = 17/144 (11%) Query: 65 KANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 N IV F S L + + R ++ + +L Sbjct: 751 SENEHKFIVFSQFTSMLDLLGPFLERAGLGHVQYDGRMRNDAREASLRSLREDAATRVLL 810 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 GLNL +V +W+ +E + R + V VY L Sbjct: 811 CSLKCGALGLNLTA-ATRVVILEPFWNP-----FVEEQAIDRVHRLTQTVDVTVYKLTIA 864 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 +T+++ +L+ K + L Sbjct: 865 DTVEQRILELQAKKRLLAAHALEE 888 Score = 42.8 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 6/48 (12%), Positives = 18/48 (37%), Gaps = 4/48 (8%) Query: 2 KQYHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE 45 + Y + + + L ++G + N+ ++ Q N ++ Sbjct: 516 RFYDQLEERADKSLEKMMKGSAMSYANALVLLLRLRQACNHPDLLKQQ 563 >gi|213408667|ref|XP_002175104.1| SHREC complex subunit Mit1 [Schizosaccharomyces japonicus yFS275] gi|212003151|gb|EEB08811.1| SHREC complex subunit Mit1 [Schizosaccharomyces japonicus yFS275] Length = 1366 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 66/198 (33%), Gaps = 31/198 (15%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEK--ANAAPIIVAY 75 ++ + Y ++ + + K+ L +++ K I+ Sbjct: 822 LMQLRKTLAHPYIYSQDVEDRTLSAELSIRSMEEASAKMLLLRILVPKLIEKNHRILFFS 881 Query: 76 HFNSDLARLQKAFPQGRTLD----------KDPCTIQEW--NEGKIPLLFAHPASCGHGL 123 F L L+ F I + + + + G G+ Sbjct: 882 QFIMQLDILEDWFDAKNIKYARFDGTTSESDRQNAIDAFCRKDSDLTCFLLSTRAGGVGI 941 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL + ++ ++ + + R + G K V V+ L+ +N+++E ++Q Sbjct: 942 NL-AKADTVIILDPDFNPHQDM-----QAIARAHRFGQKNNVTVFQLMIRNSVEEKIVQV 995 Query: 184 LRTKSTIQDLLLNALKKE 201 R K + L++ + K+ Sbjct: 996 ARRKLLLDHLIVETMDKD 1013 >gi|46125779|ref|XP_387443.1| hypothetical protein FG07267.1 [Gibberella zeae PH-1] Length = 1895 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 6/100 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++++N+G + A+ G GLN+ G N +V F + + Q V R Sbjct: 1341 RQQQVKDFNQGSKEVFLISTAAGGVGLNIH-GANRVVIFDIRHNPSHEQ-----QAVGRA 1394 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ VFVY + T ++ + R K + +++ Sbjct: 1395 YRIGQQKKVFVYRFMVAGTFEDNLNNRQVFKMQLASRVVD 1434 >gi|289621667|emb|CBI51578.1| unnamed protein product [Sordaria macrospora] Length = 1136 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 49/153 (32%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW- 104 + L + + I+ F + L ++ T + +I + Sbjct: 970 VHELHKLRSDNASHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASINHFM 1029 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G LNL + + WW+ Q +R + G R Sbjct: 1030 KNVDVECFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQSRP 1083 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + L +++++ ++ K+ + + +NA Sbjct: 1084 CTITRLCIEDSVESRMVLLQEKKTNMINSTINA 1116 >gi|171687152|ref|XP_001908517.1| hypothetical protein [Podospora anserina S mat+] gi|170943537|emb|CAP69190.1| unnamed protein product [Podospora anserina S mat+] Length = 974 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 24/172 (13%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDL-----------ARLQKAFPQGRTLDK 96 H K KA +I+ +A II+ + L R + D+ Sbjct: 732 HSTKTKATLDLIDGWQSEAPEDKIIIFVQWIPMLSILGRMLTQSGYRFVYFWGDLDQNDQ 791 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + ++ A HGLNL N + + WW++ Q R Sbjct: 792 EQSLKTFRKVPAVKIMLASITCTAHGLNLT-VANRAIMYDHWWNVCRQQ-----QAFGRV 845 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL---KKETIHV 205 + G + V ++ ++DE ++Q + K T +++ + KK I + Sbjct: 846 HRIGQTKEVHTAKIVVGGSVDERIIQIQQDKETAISGVMDGMDEIKKRPISM 897 >gi|170097814|ref|XP_001880126.1| SNF2 superfamily protein [Laccaria bicolor S238N-H82] gi|164644564|gb|EDR08813.1| SNF2 superfamily protein [Laccaria bicolor S238N-H82] Length = 828 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 30/165 (18%) Query: 52 HDEKIKALEVIIEKAN-AAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCT 100 KI L +++ +V F S L F + + T Sbjct: 669 SSAKIDQLIHLLKLTPTNEKSLVFSQFTSFLDKIAETMDEEGIPYVRFDGQMSAKRRQET 728 Query: 101 IQEWNEG-------------KIPLLFAHPASCGHGLNLQ-YGGNILVFFSLWWDLEEHQQ 146 + ++E ++ + GLNL N + WW Q+ Sbjct: 729 LASFSEKGNRRPRSGLASKRNPRVMLISLKAGALGLNLTGKFANNVYLMDPWW-----QE 783 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 IE V R + G K+ V VY LIA++T++ VL+ K + Sbjct: 784 GIESQAVDRVNRIGQKKNVHVYQLIAEDTVESKVLEIQERKKQLI 828 >gi|70568940|dbj|BAE06321.1| ATRX protein [Ciona intestinalis] Length = 1086 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ I ++N + + L+ + G G+NL G N + F W+ Sbjct: 720 DYYRMDGSTKNERRKTIIDQFNNESDTRCRLMLVSTRAGGIGINL-VGANRAIVFDASWN 778 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I RI + G + ++Y IAQ T++E + R K ++ +++ Sbjct: 779 PTHDVQSIFRI-----YRFGQTKPCYIYRFIAQGTMEEKIYDRQVVKQSLASRVVDE 830 >gi|71409960|ref|XP_807298.1| DNA excision repair protein [Trypanosoma cruzi strain CL Brener] gi|70871269|gb|EAN85447.1| DNA excision repair protein, putative [Trypanosoma cruzi] Length = 1114 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K++ L+ ++ + ++V L ++ Q + Sbjct: 798 SGKLQTLQKLLTVWQRGGQRVLVFSQTRMALDIIENMCEQEGFKYIRMDGSTSGHHRQEL 857 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NE + G G N +V F W+ + + R + G Sbjct: 858 MDRFNEDDSIVAALLTTRVGGVGVNLVGANRVVLFDPDWNP-----VTDEQARERAWRIG 912 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V VY LIA T++E +L+R K+ + + +L+ Sbjct: 913 QTRDVGVYRLIASGTVEEAILRRQLAKTYVTEKVLH 948 >gi|322830276|gb|EFZ33358.1| DNA excision repair protein, putative [Trypanosoma cruzi] Length = 1114 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K++ L+ ++ + ++V L ++ Q + Sbjct: 798 SGKLQTLQKLLTVWQRGGQRVLVFSQTRMALDIIENMCEQEGFKYIRMDGSTSGHHRQEL 857 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NE + G G N +V F W+ + + R + G Sbjct: 858 MDRFNEDDSIVAALLTTRVGGVGVNLVGANRVVLFDPDWNP-----VTDEQARERAWRIG 912 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V VY LIA T++E +L+R K+ + + +L+ Sbjct: 913 QTRDVGVYRLIASGTVEEAILRRQLAKTYVTEKVLH 948 >gi|302682272|ref|XP_003030817.1| hypothetical protein SCHCODRAFT_68280 [Schizophyllum commune H4-8] gi|300104509|gb|EFI95914.1| hypothetical protein SCHCODRAFT_68280 [Schizophyllum commune H4-8] Length = 761 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 17/146 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIP 110 + ++ IV F + L + + +D +P Sbjct: 602 LRQQDATTKSIVFSQFVNFLDLVAFRLQRAGFAVCRLEGTMSPQARDATIKHFMTNVDVP 661 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G LNL + + WW+ Q ++RI + G +R V L Sbjct: 662 VFLVSLKAGGVALNLTE-ASRVYLMDSWWNPAVEYQAMDRI-----HRLGQRRPVQAIKL 715 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 + +++I+ ++Q K+ + D L+ Sbjct: 716 VVEDSIESRIVQLQEKKAAMVDATLS 741 >gi|254566309|ref|XP_002490265.1| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) [Pichia pastoris GS115] gi|238030061|emb|CAY67984.1| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) [Pichia pastoris GS115] gi|328350658|emb|CCA37058.1| hypothetical protein PP7435_Chr1-0923 [Pichia pastoris CBS 7435] Length = 816 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 17/138 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE-GKIPLLFAHPAS 118 IV F S L ++ + + + TI+ + E + + + Sbjct: 665 KSIVFSQFTSMLDLVEWRLKRAGFETVKLQGSMSPLQRESTIKHFMETPSVEVFLVSLKA 724 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 725 GGVALNL-CEASQVFILDPWWNPSVEWQSGDRV-----HRIGQHRPVKITRFCIEDSIES 778 Query: 179 LVLQRLRTKSTIQDLLLN 196 +++ K+ + +N Sbjct: 779 RIIELQDKKANMIHATIN 796 >gi|156095999|ref|XP_001614034.1| DNA repair protein rhp16 [Plasmodium vivax SaI-1] gi|148802908|gb|EDL44307.1| DNA repair protein rhp16, putative [Plasmodium vivax] Length = 1589 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 17/146 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKIPL 111 + K ++ + S L ++ + ++ + +N + + + Sbjct: 1431 VMKTTDDKCLIFSQYCSMLDLIEYHLKKHNIICSKLLGYMSMVSRNNILYSFNEDKHLRV 1490 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G GLNLQ N + WW+ + R + G + V+ I Sbjct: 1491 LLISLKAGGEGLNLQ-VANRIFIVDPWWNPAAEL-----QAIQRAHRIGQTKTVYATRFI 1544 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 +NT++E ++Q K + D + Sbjct: 1545 IENTVEEKIVQLQNKKQLVFDCTIGD 1570 >gi|325498704|gb|EGC96563.1| SNF2 family helicase [Escherichia fergusonii ECD227] Length = 1080 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 65/204 (31%), Gaps = 31/204 (15%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 +G + + + E +++ + K+ L I+ + Sbjct: 866 EGMQQAGTGMLGLLHRLKLICAHPAVVNPEPRFRD-NSPKLNWLLKILAEIKHTTKDKVI 924 Query: 76 HFNS--DLARLQKAFPQGRTLDK-----------------DPCTIQEWNE-GKIPLLFAH 115 F DL R + + + I ++ ++ Sbjct: 925 IFTELRDLQRELQHAIHQKFGFRPVIINGDTSTKSHSQNSRQRLIDDFQAQPGFGVIILS 984 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN- 174 + G G+N+Q N ++ F+ W+ + E R + G + V+VYY ++ Sbjct: 985 TVAVGFGVNVQK-ANHVIHFTRCWNPAK-----EDQATDRAYRIGQTKDVYVYYPTVRDS 1038 Query: 175 ---TIDELVLQRLRTKSTIQDLLL 195 T +E + L+ + + +L Sbjct: 1039 EITTFEETLDDLLQRRRALAKDML 1062 >gi|321468014|gb|EFX79001.1| hypothetical protein DAPPUDRAFT_319936 [Daphnia pulex] Length = 547 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 72/190 (37%), Gaps = 14/190 (7%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 + E I + K + + + ++ V + + AL++I E V+ Sbjct: 274 VSDEEINKIDHGGKILLLMDILRH---CEKIGEKLLVFSQSLAALDLIEEFLANNASEVS 330 Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNI 131 +N L + +K +N+ + + G G+NL G N Sbjct: 331 KTWN--LNKDYFRMDGSTKPEKRLEWGTAFNDPKNPRARFFLTSTKAGGIGINL-KGANR 387 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F + W+ ++ V R + G + +VY +AQ T++E++ R K + Sbjct: 388 VIIFDVSWNPS-----VDEQSVFRAYRLGQHKPCYVYRFVAQGTMEEIMYYRQVEKLALS 442 Query: 192 DLLLNALKKE 201 +++ + E Sbjct: 443 RRIVDGEQTE 452 >gi|83771802|dbj|BAE61932.1| unnamed protein product [Aspergillus oryzae] Length = 826 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKD 97 KI+AL I+ +A +V + S L L+ + +L +D Sbjct: 651 PSSKIEALIKILTAQGQAPGTKTVVFSQWTSFLNLLEPHLNRYGVGFARVDGKMSSLARD 710 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T + ++ +L A + C GLNL N + WW IE V R Sbjct: 711 NSTYRFSHDPNCKVLLASLSVCSVGLNLVA-ANQAILADSWWAPA-----IEDQAVDRVY 764 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V+ L+ +++I++ VL TK + K+ Sbjct: 765 RLGQTRETTVWRLVMEDSIEDRVLAIQETKRKLMLAAFRETAKK 808 Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats. Identities = 7/48 (14%), Positives = 13/48 (27%), Gaps = 6/48 (12%) Query: 4 YHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEE 45 Y FQ E L + + ++ Q+ N + Sbjct: 498 YDMFQSEARGMLLDFKSKDKSSTTYSHLLEVILRLRQVCNHWALCKDR 545 >gi|307266866|ref|ZP_07548387.1| helicase domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306918113|gb|EFN48366.1| helicase domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 224 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 66/200 (33%), Gaps = 27/200 (13%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----HDEKIKALEVIIEKAN--AAP 70 ++ + K ++L +E K++ L ++ + Sbjct: 6 KNKGKSESPLGVLQKLMELCAHPRLVRDEGEVNTFQLLSESGKLQRLIELLNEIKRRGEK 65 Query: 71 IIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASC 119 ++ H+ A L+ G I + E ++ + Sbjct: 66 AVIFTHYIKMQAILRKVIMDVFGINCPVINGNIKGDRMSIIDRFKESSGFGVIILSTRAA 125 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA----QNT 175 G G+ + N ++ ++ W+ +E+ R + G R V +YY I T Sbjct: 126 GVGVTITE-ANNVIHYTRDWNPA-----VEKQATDRVYRIGQTREVNIYYPICISSRGKT 179 Query: 176 IDELVLQRLRTKSTIQDLLL 195 ++E + + L+ K + + ++ Sbjct: 180 VEERLNEVLQKKLQLLNEVI 199 >gi|164607171|ref|NP_001101334.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Rattus norvegicus] Length = 1024 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 65/195 (33%), Gaps = 23/195 (11%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAP 70 + + K Q + + + K + L I+ + Sbjct: 815 LIFEDMEVMTDFELHVLCKQYQ----HINSYQLDMDLILDSGKFRTLGCILSELKQKGDR 870 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASC 119 +++ F L L+ + + I E+N + I + + Sbjct: 871 VVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAG 930 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL N+++ + + ++ R + G + V V LI+Q TI+E Sbjct: 931 GLGINLTS-ANVVILHDIDCNP-----YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEES 984 Query: 180 VLQRLRTKSTIQDLL 194 +L+ + K ++ + Sbjct: 985 MLKINQQKLKLEQDM 999 >gi|74150111|dbj|BAE24366.1| unnamed protein product [Mus musculus] Length = 924 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 65/210 (30%), Gaps = 33/210 (15%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + + Sbjct: 721 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH 780 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 781 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 840 Query: 98 -PCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + G G+NL + +V F W+ + + Sbjct: 841 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWNPQN-----DLQAQA 894 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 R + G K+ V +Y L+ + +++E +L+R Sbjct: 895 RAHRIGQKKQVNIYRLVTKGSVEEDILERA 924 >gi|71018359|ref|XP_759410.1| hypothetical protein UM03263.1 [Ustilago maydis 521] gi|46098957|gb|EAK84190.1| hypothetical protein UM03263.1 [Ustilago maydis 521] Length = 1054 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 45/138 (32%), Gaps = 17/138 (12%) Query: 70 PIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 +V F + L + ++ + + + Sbjct: 903 KSLVFSQFVNFLDLIAFRLQRAGFQICRLEGNMSPEARNRTIKHFMENPGVTVFLVSLKA 962 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q ++RI + G R + V ++ +N+I+ Sbjct: 963 GGVALNLTE-ASRVYLMDPWWNPSVEVQAMDRI-----HRLGQHRPIIVKRMVIENSIES 1016 Query: 179 LVLQRLRTKSTIQDLLLN 196 +++ KS + + + Sbjct: 1017 RIIELQNKKSAMIEAAIG 1034 >gi|238494326|ref|XP_002378399.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] gi|220695049|gb|EED51392.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] Length = 942 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKD 97 KI+AL I+ +A +V + S L L+ + +L +D Sbjct: 767 PSSKIEALIKILTAQGQAPGTKTVVFSQWTSFLNLLEPHLNRYGVGFARVDGKMSSLARD 826 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T + ++ +L A + C GLNL N + WW IE V R Sbjct: 827 NSTYRFSHDPNCKVLLASLSVCSVGLNLVA-ANQAILADSWWAPA-----IEDQAVDRVY 880 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V+ L+ +++I++ VL TK + K+ Sbjct: 881 RLGQTRETTVWRLVMEDSIEDRVLAIQETKRKLMLAAFRETAKK 924 >gi|317149015|ref|XP_001823065.2| SNF2 family helicase [Aspergillus oryzae RIB40] Length = 924 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 20/164 (12%) Query: 52 HDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKD 97 KI+AL I+ +A +V + S L L+ + +L +D Sbjct: 749 PSSKIEALIKILTAQGQAPGTKTVVFSQWTSFLNLLEPHLNRYGVGFARVDGKMSSLARD 808 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T + ++ +L A + C GLNL N + WW IE V R Sbjct: 809 NSTYRFSHDPNCKVLLASLSVCSVGLNLVA-ANQAILADSWWAPA-----IEDQAVDRVY 862 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V+ L+ +++I++ VL TK + K+ Sbjct: 863 RLGQTRETTVWRLVMEDSIEDRVLAIQETKRKLMLAAFRETAKK 906 Score = 34.7 bits (78), Expect = 8.6, Method: Composition-based stats. Identities = 7/48 (14%), Positives = 13/48 (27%), Gaps = 6/48 (12%) Query: 4 YHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEE 45 Y FQ E L + + ++ Q+ N + Sbjct: 596 YDMFQSEARGMLLDFKSKDKSSTTYSHLLEVILRLRQVCNHWALCKDR 643 >gi|195473411|ref|XP_002088987.1| GE10215 [Drosophila yakuba] gi|194175088|gb|EDW88699.1| GE10215 [Drosophila yakuba] Length = 166 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 7/107 (6%) Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++N + I + + G G+NL ++ + ++ ++ R Sbjct: 29 RQDLITDFNGDDNIFVFLLSTKAGGVGINLTAADTCVIH-DIDFNP-----YNDKQAEDR 82 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +R V +Y LI+++TI+E +L K ++ + + K E Sbjct: 83 CHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEKGEV 129 >gi|326468579|gb|EGD92588.1| SNF2 family helicase [Trichophyton tonsurans CBS 112818] Length = 921 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 56/159 (35%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 KI+AL I+ +A +V + S L ++ +D Sbjct: 748 SSKIQALIKILTAKGQAAGTKTVVFSQWTSFLDLIEPHLVIHNINFARIDGKMNSAKRDA 807 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + ++ A C GLNL N +V WW IE V R + Sbjct: 808 AMGKFSRDSECTVMLASLNVCSVGLNLVA-ANQVVLADSWWAPA-----IEDQAVDRVYR 861 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R ++ L+ +N+I++ VL + K + Sbjct: 862 LGQTRPTTIWRLVMENSIEDRVLDIQKEKRELMSTAFQE 900 Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats. Identities = 3/30 (10%), Positives = 10/30 (33%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEE 45 +G+ + ++ Q+ N + Sbjct: 612 KGKKTTYSHVLEVLLRLRQVCNHWKLCHDR 641 >gi|225677983|gb|EEH16267.1| DNA repair and recombination protein RAD26 [Paracoccidioides brasiliensis Pb03] Length = 1030 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 48/139 (34%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 N ++V H L LQ F T D + +N + + + Sbjct: 630 HRNGDKVLVFSHSVRLLKMLQMLFKHTSYNVSYLDGSMTYDNRAKAVDNFNADPREFVFL 689 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G R V V+ LI+ Sbjct: 690 ISTRAGGIGLNITS-ANKVVVVDPNWNPA-----FDLQAQDRAYRIGQSRDVEVFRLISA 743 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 744 GTIEEIVYARQIYKQQQAN 762 >gi|118378915|ref|XP_001022631.1| HSA family protein [Tetrahymena thermophila] gi|89304398|gb|EAS02386.1| HSA family protein [Tetrahymena thermophila SB210] Length = 1232 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 71/193 (36%), Gaps = 27/193 (13%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEK--ANAAPIIVAYHFN 78 + ++ + N + ++ K + L+ ++ K +++ Sbjct: 706 MNLMMQLKKCCNHPYLFLNSDAYQIDDMIWRVSGKFELLDKMLAKLIRTGHRVLIFTQMT 765 Query: 79 SDLARLQKAF------------PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLN 124 + +++ F D+ + ++N+ P + + G GLN Sbjct: 766 HVMDLMEEYFKLREDYIKYLRLDGTTKADERGVKMAQFNQPNSPYNVFILSTRAGGLGLN 825 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ + ++ F W+ + +++ R + G K V VY L+ I+E +L + Sbjct: 826 LQT-ADTVIIFDSDWNPQ-----MDQQAQDRAHRIGSKSEVRVYRLVTNTWIEEEILSKA 879 Query: 185 RTKSTIQDLLLNA 197 K + ++++ A Sbjct: 880 AYKMGLDEMIIQA 892 >gi|213406245|ref|XP_002173894.1| helicase SWR1 [Schizosaccharomyces japonicus yFS275] gi|212001941|gb|EEB07601.1| helicase SWR1 [Schizosaccharomyces japonicus yFS275] Length = 845 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 23/227 (10%), Positives = 69/227 (30%), Gaps = 50/227 (22%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE--------------------- 54 + ++ + ++ +++N + + + Sbjct: 624 ESSSLATHSPGFLLMQLRKISNHFLLVRNHYTDELLKTMASEIMKEKTYADANEQYIFED 683 Query: 55 ---KIKALEVIIEKA---------NAAPIIVAYHFNSDLAR-----------LQKAFPQG 91 ++ P + A F L + Sbjct: 684 MQVMTDIELHLLCSQYSSLNRFMLAGEPWMEATKFTQMLDILELVLKNLKVEFLRIDGST 743 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + Q + + + G G+NL N+++ + + ++ + + Sbjct: 744 QVDSRQDLIDQFYENENYKVFLLSTKAGGFGINL-ACANVVILYDVSYNPFD-----DLQ 797 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R + G K+ V+V+ L+ ++T++E +L+ TK + + + A+ Sbjct: 798 AEDRAHRVGQKKDVYVHRLVVKDTVEENILKLANTKVALDETISGAV 844 >gi|242025432|ref|XP_002433128.1| helicase, putative [Pediculus humanus corporis] gi|212518669|gb|EEB20390.1| helicase, putative [Pediculus humanus corporis] Length = 942 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 64/162 (39%), Gaps = 20/162 (12%) Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 + K+ L+ ++ + + +++ L L+ + + Sbjct: 365 NCGKMVILDKLLPRLQDQDSRVLIFSQMTRMLDILEDYCFWKGYKYCRLDGNTSHEDRQR 424 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+N + + G G+NL ++++ + W+ + ++ + R Sbjct: 425 QINEYNAPNSEKFIFMLSTRAGGLGINL-ATADVVILYDSDWNPQ-----MDLQAMDRAH 478 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V V+ LI +NT++E +++R K + L++ + Sbjct: 479 RIGQLKEVRVFRLITENTVEEKIVERAEVKLRLDKLVIQQGR 520 >gi|320167261|gb|EFW44160.1| hypothetical protein CAOG_02185 [Capsaspora owczarzaki ATCC 30864] Length = 1223 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 22/164 (13%) Query: 53 DEKIKALEVIIEKANA----APIIVAYHFNSDLARLQKAFPQGRTLD----------KDP 98 K+ L I+E+ +V + S L L++ + + Sbjct: 1031 SCKMVRLLQILEETRNTDSTIKTVVFSQWTSMLDLLEQPLAINKFQFTRLDGRMGRRQRE 1090 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +Q ++ + + + GLNL G+ +V WW Q ++R+ Sbjct: 1091 KALQAFDSDPAVTVFLISLKCGSLGLNLTA-GSQVVVLDPWWCPSAEDQAVDRV-----Y 1144 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V V + ++T++E VL+ + K + A K+E Sbjct: 1145 RLGQMRPVVVRSIFVRDTVEESVLKLQQAKRDLMQSTF-ASKEE 1187 Score = 39.0 bits (89), Expect = 0.41, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 22/68 (32%), Gaps = 4/68 (5%) Query: 4 YHKFQRELYCDLQGENIEA----FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y + + + +LQ + + ++ Q + D +W + L Sbjct: 746 YRELSEQTFKELQRLMADVGKHYMSILELLLRLRQFCDHPSLVDSVMNWDNKGESTAARL 805 Query: 60 EVIIEKAN 67 + I+ N Sbjct: 806 DAFIDSGN 813 >gi|145515018|ref|XP_001443414.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124410792|emb|CAK76017.1| unnamed protein product [Paramecium tetraurelia] Length = 1024 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 28/218 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEV------HD 53 K Y + + ++ ++ + A + ++ ++ N + V Sbjct: 615 KIYDQINQRGVMTFDQQSGKSGSQALQNLMMQLRKICNHPYLFMLNLDMNRVTDEIWRSS 674 Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K + L+ II K +++ + ++ F + I Sbjct: 675 GKFELLDRIIPKLLYFKHRLLIFSQMTQLMDIMEAFFEYRGWRYLRLDGSTKSEDRESRI 734 Query: 102 QEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 Q +N + + G GLNLQ + +V F W+ M++ R + Sbjct: 735 QLFNQENSIYNIFLLSTRAGGLGLNLQS-ADTVVLFDSDWNP-----MMDLQAQDRAYRI 788 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K V V LI I+ +L + K + +++ A Sbjct: 789 GQKNEVRVLRLITATQIEGNILSKAEHKMGLDAVIIQA 826 >gi|71410996|ref|XP_807766.1| DNA excision repair protein [Trypanosoma cruzi strain CL Brener] gi|70871837|gb|EAN85915.1| DNA excision repair protein, putative [Trypanosoma cruzi] Length = 1118 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K++ L+ ++ + ++V L ++ Q + Sbjct: 802 SGKLQTLQKLLTVWQRGGQRVLVFSQTRMALDIIENMCEQEGFKYIRMDGSTSGHHRQEL 861 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NE + G G N +V F W+ + + R + G Sbjct: 862 MDRFNEDDSIVAALLTTRVGGVGVNLVGANRVVLFDPDWNP-----VTDEQARERAWRIG 916 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V VY LIA T++E +L+R K+ + + +L+ Sbjct: 917 QTRDVGVYRLIASGTVEEAILRRQLAKTYVTEKVLH 952 >gi|330918867|ref|XP_003298372.1| hypothetical protein PTT_09092 [Pyrenophora teres f. teres 0-1] gi|311328410|gb|EFQ93512.1| hypothetical protein PTT_09092 [Pyrenophora teres f. teres 0-1] Length = 1029 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 17/150 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKI 109 + K IV F S L ++ T + +I + + Sbjct: 868 KLRSKKQTLKSIVFSQFTSMLQLIEWRLRRAGFNTVMLDGSMTPAQRQKSIDHFMTNPDV 927 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 928 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 981 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 L +++++ ++ K+ + +N K Sbjct: 982 LCVEDSVESRMVALQEKKAAMIAGTINNDK 1011 >gi|290976692|ref|XP_002671073.1| predicted protein [Naegleria gruberi] gi|284084639|gb|EFC38329.1| predicted protein [Naegleria gruberi] Length = 998 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 28/197 (14%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---HDEKIKALEVIIEKAN- 67 DL + +A + ++ + + E K + ++ ++EK N Sbjct: 679 MDDLDDKQRKAME-----RRLKKIQDDLIKERIRNEPIEQLISSSVKAQLVKHLVEKCNE 733 Query: 68 -AAPIIVAYHFNSDLARLQKAFPQGRT-----------LDKDPCTIQEWN-EGKIPLLFA 114 +++ + L + + + E+N KI Sbjct: 734 EGHRVLIFSQYTRMLDIIGHVLKSMKVKFNRIDGSVTRHQDRTQLVDEFNENEKIKCFIL 793 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + ++ ++ +Q ++R + G K V VY LI+ Sbjct: 794 SSQAGGVGLNLVS-ASRVIIVDANFNPSIDEQSVDRC-----YRIGQKENVIVYRLISAG 847 Query: 175 TIDELVLQRLRTKSTIQ 191 TI+E + +R +K+T+ Sbjct: 848 TIEEYIYKRQVSKTTVS 864 >gi|171688350|ref|XP_001909115.1| hypothetical protein [Podospora anserina S mat+] gi|170944137|emb|CAP70247.1| unnamed protein product [Podospora anserina S mat+] Length = 961 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 54/161 (33%), Gaps = 20/161 (12%) Query: 50 EVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDK 96 E K +AL I++ K + +I+ + S L K Sbjct: 785 ETKSSKTEALLKILQATLKKEGSKVIIFSQWTSFLNVIQRQLDEAGYTYTRIDGSMNATK 844 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+ + ++ A A C GLNL + +V WW IE V R Sbjct: 845 RDVAIKALDEDPNTRIMLASLAVCSVGLNLVS-ADTVVLADSWWAPA-----IEDQAVDR 898 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V+ L+ + T++E VL K + Sbjct: 899 VHRLGQTRETTVWRLVMEGTVEERVLDIQAEKRELVGKAFQ 939 >gi|149238518|ref|XP_001525135.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146450628|gb|EDK44884.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 421 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 71/192 (36%), Gaps = 20/192 (10%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLAR 83 ++ + + + + KIK LE I++ +++ F L Sbjct: 212 AELNRLCVQFPHTLKKWQLPEDAFLDSGKIKTLESILKTIIVERREKVLIFSLFTQMLDI 271 Query: 84 LQK----------AFPQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 L++ G +++ TI + + IP+ + G G+NL N + Sbjct: 272 LEQVLSVFKYKFVRLDGGTRVEERQETIDLFYQDDSIPVFLLSTKAGGFGINLVA-ANNV 330 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + ++ + ++ R + G K+ V VY L++ TI+ ++ + K + Sbjct: 331 ISYDQSFNPHD-----DKQAEDRAHRVGQKKEVTVYKLVSDKTIEINMMMLAQNKLQLDA 385 Query: 193 LLLNALKKETIH 204 + + + I Sbjct: 386 SMSDETSETKIE 397 >gi|322504140|emb|CAM36456.2| putative DNA excision/repair protein SNF2 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 731 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 53/197 (26%), Gaps = 39/197 (19%) Query: 34 QLANGAVY--YDEEKHWKEVHD---------------EKIKALEVII--EKANAAPIIVA 74 Q+ N DE H+ K+ +I + +V Sbjct: 330 QICNHPWLSLVDEAFAAALAHNPYEAPVAEIGDIFGGAKLWVALQLILRCVSERRKTLVF 389 Query: 75 YHFNS----------DLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGL 123 + G ++ + +N + + G GL Sbjct: 390 SRSKRLLHLLSFLLREWRLTHTQVDGGTPSERRCAEVDRFNSNAGVWVCLLTTQVGGVGL 449 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + +V W+ + V R + G +R V V+ L+ T++E V + Sbjct: 450 TF-SAASAVVLLDPSWNPSA-----DAQAVDRVHRIGQQRNVVVFRLVTCGTVEEKVYRN 503 Query: 184 LRTKSTIQDLLLNALKK 200 K L + K Sbjct: 504 QIFKRM---AALQSTKG 517 >gi|154331301|ref|XP_001561469.1| DNA excision/repair protein SNF2 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 731 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 53/197 (26%), Gaps = 39/197 (19%) Query: 34 QLANGAVY--YDEEKHWKEVHD---------------EKIKALEVII--EKANAAPIIVA 74 Q+ N DE H+ K+ +I + +V Sbjct: 330 QICNHPWLSLVDEAFAAALAHNPYEAPVAEIGDIFGGAKLWVALQLILRCVSERRKTLVF 389 Query: 75 YHFNS----------DLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGL 123 + G ++ + +N + + G GL Sbjct: 390 SRSKRLLHLLSFLLREWRLTHTQVDGGTPSERRCAEVDRFNSNAGVWVCLLTTQVGGVGL 449 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + +V W+ + V R + G +R V V+ L+ T++E V + Sbjct: 450 TF-SAASAVVLLDPSWNPSA-----DAQAVDRVHRIGQQRNVVVFRLVTCGTVEEKVYRN 503 Query: 184 LRTKSTIQDLLLNALKK 200 K L + K Sbjct: 504 QIFKRM---AALQSTKG 517 >gi|189198105|ref|XP_001935390.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981338|gb|EDU47964.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1116 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 6/110 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++D + I ++ + G GLNL N + ++ Q ++R Sbjct: 995 MTRENRDKSMQALREDPSIRVMLVSIGAGGLGLNLTT-ANKVFMMEPQFNPAAEAQAVDR 1053 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + + G R V + I + + +E +L+ K + D+ ++ +K Sbjct: 1054 V-----HRLGQDREVTIKRFIMEGSFEEKMLELQNKKRDLADMTMSKERK 1098 >gi|312211271|emb|CBX91356.1| hypothetical protein [Leptosphaeria maculans] Length = 1199 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 52/162 (32%), Gaps = 19/162 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ------------KAFPQG 91 + + K+ + +N +++ H L L+ Sbjct: 642 NQSQSEFCGKWKVLRRMLDFWHSNGDKVLIFSHSVRLLRLLKGLFDVYGTKYNFSYLDGS 701 Query: 92 RTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ + ++N + + G GLN+ N +V W+ + Sbjct: 702 MKYEERSKAVADFNADANQFVFLISTKAGGVGLNITS-ANKVVIMDPNWNPAH-----DL 755 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ L++ T++E+V R K + Sbjct: 756 QAQDRAYRIGQTRDVEVFRLVSSGTVEEVVYARQIYKQQQAN 797 >gi|297202132|ref|ZP_06919529.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297148045|gb|EDY57603.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 747 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 23/159 (14%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-------------- 95 K+ L I+ + N +V HF L +++A T Sbjct: 550 KSAKLDRLLEIVREAGENGQKTVVFSHFKDVLNVVREALATAHTDGTALFGPLTGSVPAG 609 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + ++ + P +L A + G GLN+Q +++V IE V Sbjct: 610 RRQQMVDDFADVPGPAVLVAQIQAAGVGLNMQA-ASVVVICEPQIKPT-----IEHQAVA 663 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G R V VY L+A +DE +++ L TK+ + D Sbjct: 664 RAHRMGQVRPVRVYRLLATGGVDERLVKLLETKTRLFDA 702 >gi|320592092|gb|EFX04531.1| DNA excision repair protein [Grosmannia clavigera kw1407] Length = 992 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 46/140 (32%), Gaps = 17/140 (12%) Query: 69 APIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 I+ F + L ++ T + +I+ + + Sbjct: 839 HKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGSMTPAQRQASIEYFKENVDVECFLVSLK 898 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G R V L +++++ Sbjct: 899 AGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQTRPCVVTRLCIEDSVE 952 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 ++ K+ + + +N+ Sbjct: 953 SRMVMLQEKKTKMINSTINS 972 >gi|260806897|ref|XP_002598320.1| hypothetical protein BRAFLDRAFT_204851 [Branchiostoma floridae] gi|229283592|gb|EEN54332.1| hypothetical protein BRAFLDRAFT_204851 [Branchiostoma floridae] Length = 490 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 97 DPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N + L + G G+NL G N ++ F W+ Q I R+ Sbjct: 368 RERWAEIFNSPDNERARLFLISTRAGGLGINL-VGANRVIIFDASWNPSHDVQSIFRV-- 424 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + VFVY +AQ T++E + R TK ++ +++ Sbjct: 425 ---YRFGQGKPVFVYRFLAQGTMEEKIYDRQVTKQSLAARVVDE 465 >gi|299117109|emb|CBN73880.1| conserved unknown protein [Ectocarpus siliculosus] Length = 2864 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 10/122 (8%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFS 136 + R K I +N+ + + + G+NL N +V Sbjct: 2533 ENGRQYFRIDGETPSKKRQQLISRFNDPERKSTGVFLLSTKAGNMGINLVA-ANRVVLMD 2591 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN-TIDELVLQRLRTKSTIQDLLL 195 W+ + + R + G K+ V V+ L+ N +++ + + K + ++ Sbjct: 2592 TSWNPAN-----DLQAMFRCYRFGQKKPVQVFRLVMGNKSLEYKIHNKQVAKHALAGRVV 2646 Query: 196 NA 197 +A Sbjct: 2647 DA 2648 >gi|317026301|ref|XP_001389337.2| chromatin remodeling complex subunit (Chd3) [Aspergillus niger CBS 513.88] Length = 1282 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 71/209 (33%), Gaps = 31/209 (14%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDE-----------EKHWKEVHDEKIKALEVIIEKA 66 + E N + ++ + Y K + LE+++ K Sbjct: 697 KQTEKHNLNNILMQLRKCLCHPFVYSRAIEEKTSNAAVSHRHLVDAAAKFQLLELMLPKL 756 Query: 67 N--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNEGKIPLL-- 112 +++ F +L ++ + + TI +N + P Sbjct: 757 KNRGHRVLIFSQFLENLDIIEDFLEGVGLTYLRLDGRMSSLEKQKTIDAYNAEESPYFAF 816 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G G+NL + ++ ++ + ++R + G K V V+ L+ Sbjct: 817 LLSTRSGGVGINL-ATADTVIIMDPDFNPHQDM-----QALSRAHRIGQKNKVLVFQLMT 870 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + +E ++Q + K + +L++ + E Sbjct: 871 RASAEEKIMQIGKKKMVLDHVLIDRMVSE 899 >gi|193671687|ref|XP_001946103.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Acyrthosiphon pisum] Length = 848 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 21/180 (11%), Positives = 58/180 (32%), Gaps = 23/180 (12%) Query: 32 CLQLANGAV----YYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQ 85 +L + + K K L I+ +++ F L L+ Sbjct: 645 LHKLCTDYRCLSKLGYDLPIQMFLDSGKFKLLNEILPDLKDRGHRVLIFSQFLQILDLLE 704 Query: 86 KAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + I +N + + + G G+NL + ++ Sbjct: 705 IYMSHYGHSYLRLDGSTQVQERQLMIDLYNMDESLFAFLLSTKAGGLGINLTA-ADTVII 763 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + ++ ++ R + G + V V I++++++E + + + K ++ + Sbjct: 764 HDIDYNP-----YNDKQAEDRCHRVGQTKPVKVIKFISKDSVEESMFKVAQDKLNLEQQV 818 >gi|163854526|ref|YP_001628824.1| helicase, putative [Bordetella petrii DSM 12804] gi|163258254|emb|CAP40553.1| helicase, putative [Bordetella petrii] Length = 1246 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 64/226 (28%), Gaps = 36/226 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYY------DEEKHWKEVHDE 54 K Y I F N + + E Sbjct: 854 KLYASAIESFKARKDPGAISPFKNMLGLLHYLRLICTDPRRHGLTAPNPEPLKQYREKSP 913 Query: 55 KIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQ-----------------GRTLD 95 K+ L + + +I+ F + L+ + G Sbjct: 914 KLDWLLEQLKLIQKKDEKVIIFCEFRNIQRLLRHYIEEQFNIFPPIINGDTSATAGHADS 973 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + P + G G+N+Q N ++ ++ W+ + E R Sbjct: 974 RQRQIKKFQEAAGFGAIILSPVAVGFGVNIQA-ANHVIHYTRTWNPAK-----EDQATDR 1027 Query: 156 QRQAGFKRAVFVYYLIAQ----NTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ V+VYY + + T D + Q L K + +LN Sbjct: 1028 AYRIGQKKDVYVYYPVVKADDFATFDVKLDQLLTRKRELAGDMLNG 1073 >gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger, RING-type; ATP-requiring DNA helicase RecQ [Medicago truncatula] Length = 844 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 23/155 (14%) Query: 52 HDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQG----------RTLDKD 97 K+ L ++ ++ +V F L L++ + Sbjct: 668 SSTKVSTLIKLLTESRDQNPATKSVVFSQFRKMLLLLEEPLKAAGFKTLRLDGTMNAKQR 727 Query: 98 PCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I+++ ++ +L A + G+NL + + WW+ +E + Sbjct: 728 AQVIEQFQLSEVDEPMILLASLRASSTGINLTA-ASRVYLMEPWWNPA-----VEEQAMD 781 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 R + G K V + LIA+N+I+E +L K Sbjct: 782 RVHRIGQKEEVKIVRLIAKNSIEEKILMLQEKKKK 816 Score = 34.3 bits (77), Expect = 8.9, Method: Composition-based stats. Identities = 13/139 (9%), Positives = 33/139 (23%), Gaps = 12/139 (8%) Query: 2 KQYHKFQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + + E+ + S ++ Q+ + Sbjct: 488 KLYDEVKEEIKSLMMHHNSNDRLVSSYSTVLSMILRLRQICADFSMVPLDFKSCLFSS-- 545 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 +E I + F+ + K +TL + +++ P+ + Sbjct: 546 -TDIEGIEMNQSGCIFCYIRKFSFAGNHVSKNPELLQTLIRMLQDGEDF---DCPICLSP 601 Query: 116 PASCGHGLNLQYGGNILVF 134 P + Sbjct: 602 PTDIVITCCAHIFCRECIL 620 >gi|302837269|ref|XP_002950194.1| hypothetical protein VOLCADRAFT_117484 [Volvox carteri f. nagariensis] gi|300264667|gb|EFJ48862.1| hypothetical protein VOLCADRAFT_117484 [Volvox carteri f. nagariensis] Length = 1735 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 44/145 (30%), Gaps = 21/145 (14%) Query: 67 NAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTIQEWNE-----GKIPL 111 +++ F L L+ I + + Sbjct: 1491 EGRRVLIFSQFVIMLNVLEDYCNAVGFPVERIDGSIQGRDRQRAIDRFCAEGEGSDGAFV 1550 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+ L + + + W+ + + + R + G K+ V VY LI Sbjct: 1551 FLLSTRAGGQGITLTA-ADTCIIYDSDWNPQN-----DLQAMARCHRIGQKKEVTVYRLI 1604 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 +++T + + K + + +L Sbjct: 1605 SRDTYEMALFNSASRKYGLDEAILG 1629 >gi|255553699|ref|XP_002517890.1| conserved hypothetical protein [Ricinus communis] gi|223542872|gb|EEF44408.1| conserved hypothetical protein [Ricinus communis] Length = 870 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 61/160 (38%), Gaps = 19/160 (11%) Query: 51 VHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDK---------DP 98 H K++ALE ++ + +++ + L + +G + + Sbjct: 534 KHCGKMRALEKLMCSWASRGDKLLLFSYSVRMLDILEKFVIRKGYSFSRLDGSTPTNLRQ 593 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++N + + G GLNL N +V F W+ + R Sbjct: 594 SMVDDFNSSPSKQVFLISTRAGGLGLNLVS-ANRVVIFDPNWNPA-----YDLQAQDRSF 647 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G KR V V+ L+A + +ELV R K + ++ ++ Sbjct: 648 RFGQKRHVVVFRLLAAGSFEELVYSRQVYKQQLSNIAVSG 687 >gi|259907267|ref|YP_002647623.1| Non-specific serine/threonine protein kinase [Erwinia pyrifoliae Ep1/96] gi|224962889|emb|CAX54370.1| Non-specific serine/threonine protein kinase [Erwinia pyrifoliae Ep1/96] gi|283477080|emb|CAY72980.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [Erwinia pyrifoliae DSM 12163] Length = 1081 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 67/205 (32%), Gaps = 31/205 (15%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 +G K + + E ++E H K+ + ++ + Sbjct: 866 EGMQEAGTGMLGLLHKLKLICAHPFSVNPEPGYRE-HSPKLNWMLHTLDGIKRSGEDKVI 924 Query: 76 HFNS--DLARLQKAFPQGRTLDK-----------------DPCTIQEWNE-GKIPLLFAH 115 F DL R + R + I ++ ++ Sbjct: 925 VFTELRDLQRELQHAIYQRFGFRPVIINGDTSTKSNSQNSRQKLIDDFQSQPGFDVIILS 984 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN- 174 + G G+N+Q N ++ F+ W+ + E R + G + V+VYY ++ Sbjct: 985 TVAVGFGVNVQK-ANHVIHFTRCWNPAK-----EDQATDRAYRIGQTKDVYVYYPTVRDS 1038 Query: 175 ---TIDELVLQRLRTKSTIQDLLLN 196 T +E + + L + ++ +L+ Sbjct: 1039 EVTTFEETLDELLNRRRSLARDMLS 1063 >gi|255552930|ref|XP_002517508.1| ATP-dependent helicase, putative [Ricinus communis] gi|223543519|gb|EEF45050.1| ATP-dependent helicase, putative [Ricinus communis] Length = 1138 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 66/163 (40%), Gaps = 23/163 (14%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQK---------------AFPQGRTLDKDPC 99 K +++ +A ++V + L + + + Sbjct: 929 KFLMEIILLSEAMKERVLVFSQYLDPLKLIAMQLESRFHWIQGKEILHMHGKLDMGERQS 988 Query: 100 TIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+++N+ + ++ A +C G+NL G + +V + W+ R ++R Sbjct: 989 LIKDFNDRKSEAKVMLASTKACSEGINL-VGASRVVLLDVVWNPSVV-----RQAISRAY 1042 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G ++ V++Y+LIA T++E R K + +L+ ++ + Sbjct: 1043 RLGQEKVVYIYHLIASETLEEDKYCRQAEKERLSELVFDSSDR 1085 >gi|148666355|gb|EDK98771.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1`, isoform CRA_a [Mus musculus] Length = 1032 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 23/195 (11%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAP 70 + + K Q + + + K +AL I+ + Sbjct: 823 LIFEDMEVMTDFELHVLCKQYQ----HINSYQLDMDLILDSGKFRALGCILSELKQKGDR 878 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASC 119 +++ F L L+ + + I E+N + I + + Sbjct: 879 VVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAG 938 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL N+++ + + ++ R + G + V V LI+Q TI+E Sbjct: 939 GLGINLTS-ANVVILHDIDCNP-----YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEES 992 Query: 180 VLQRLRTKSTIQDLL 194 +L+ + K ++ + Sbjct: 993 MLKINQQKLKLEQDM 1007 >gi|302665600|ref|XP_003024409.1| hypothetical protein TRV_01372 [Trichophyton verrucosum HKI 0517] gi|291188462|gb|EFE43798.1| hypothetical protein TRV_01372 [Trichophyton verrucosum HKI 0517] Length = 974 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 49/147 (33%), Gaps = 17/147 (11%) Query: 69 APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 IV F S L ++ + + + +I + + Sbjct: 820 NKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQRQRSIDYFMKNVDTEVFLVSLK 879 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G +R + L +++++ Sbjct: 880 AGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVE 933 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ K+ + + +N + E + Sbjct: 934 SRMVLLQEKKANMINGTINKDQSEALE 960 >gi|225427375|ref|XP_002279753.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1084 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 62/128 (48%), Gaps = 8/128 (6%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNIL 132 YHF+ + + R + + +I +N+ ++ +L A +C G++L G + + Sbjct: 912 YHFHWIVGKEVLYMDGQRDVKQRQSSINTFNDPASQVRVLLASTKACSEGISL-VGASRV 970 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + W+ +ER ++R + G ++ V++Y+L+ T++E R K + + Sbjct: 971 ILLDVVWNPS-----VERQAISRAYRLGQRKVVYIYHLLTSGTMEEEKYCRQAKKDRLSE 1025 Query: 193 LLLNALKK 200 L+ ++ K Sbjct: 1026 LVFSSKDK 1033 >gi|281202078|gb|EFA76283.1| RUN domain-containing protein [Polysphondylium pallidum PN500] Length = 1467 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 25/166 (15%) Query: 51 VHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLAR---------------LQKAFPQG 91 V K+ L I + A I++ + + L R ++ + Sbjct: 1282 VPSTKLTLLMEQINETLSKEKGAKIVIFSQWTTMLDRIEEIFVENRWSESGKYERFDGKM 1341 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K EG ++ + G G+NL N + WW++ E Sbjct: 1342 SAKQKKAALENFQMEGGPVVMLISLKAGGVGINLTR-ANKVFLVDPWWNVAA-----ENQ 1395 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V V LI +I+E +L+ TK + +L+ Sbjct: 1396 AIDRLHRIGQTKPVTVKKLIITRSIEERILELQETKEVMTQAILDD 1441 >gi|255081825|ref|XP_002508131.1| SNF2 super family [Micromonas sp. RCC299] gi|226523407|gb|ACO69389.1| SNF2 super family [Micromonas sp. RCC299] Length = 2064 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 8/112 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFA--HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G L I ++N + G G+NL + +V + ++ I Sbjct: 947 GTPLADRQRVIVDFNTPGSDTFLLLISTRAGGQGVNL-ATADTIVLYDPDFNP-----FI 1000 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + +R + G R V VY L+ T++E ++ ++K I+ L++ ++ Sbjct: 1001 DSQAQSRAHRMGQTREVAVYQLVTAKTVEEKIVSMAKSKLAIERLVVKDVRA 1052 >gi|195453451|ref|XP_002073794.1| GK12953 [Drosophila willistoni] gi|194169879|gb|EDW84780.1| GK12953 [Drosophila willistoni] Length = 1069 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 23/165 (13%) Query: 52 HDEKIKALEVIIEK-----ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 K+ + I++ + I+ + L L+ + + + Sbjct: 895 PSSKMLKIIEILKTSIFRGKSNDKAIIVSQWTGVLDILRDHLEKDKFDTLSLNGTIPVKS 954 Query: 97 DPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++N+ +L + G GLNL G N L+ L W+ + Q +RI Sbjct: 955 RQDIVNQFNDPRNPKRILLLSLTAGGVGLNL-IGANHLLLLDLHWNPQLECQAQDRI--- 1010 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V +Y + T++E + K + + +L K Sbjct: 1011 --YRVGQKKDVVIYKFMCLETVEERIKALQDRKLELAEGVLTGAK 1053 Score = 40.5 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 5/58 (8%), Positives = 15/58 (25%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y Q+ + +++ + ++ Q+ D + E Sbjct: 760 YKMHQKFAKMAGSKKEVKSHDILVLLLRLRQICCHPGLIDSMLEDNGADKMANNSSEE 817 >gi|193678803|ref|XP_001948361.1| PREDICTED: transcription termination factor 2-like isoform 1 [Acyrthosiphon pisum] gi|328713458|ref|XP_003245082.1| PREDICTED: transcription termination factor 2-like isoform 2 [Acyrthosiphon pisum] Length = 1133 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 73/243 (30%), Gaps = 64/243 (26%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------------- 52 + ++I+ + ++ QL + + Sbjct: 872 VNNKSIQTHHILVLILRLRQLCCHPCLLKNMLEDECLKTDGIQNNGDLDIVDKLSRMSIG 931 Query: 53 ---------------------DEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAF 88 KIKA+ ++++ ++ + S L + K Sbjct: 932 IPNIENDTVKNSNVIFNEKWISSKIKAVCDMVKEKVLHTDDKAVIVSQWPSVLNLVNKQL 991 Query: 89 PQGRTLDK----------DPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 Q + I E+++ G +L + G GLNL N L Sbjct: 992 SQYNVKTEIFSGAVPVLLRNKIISEFDKVRGGPKILLLSLTAGGVGLNL-VVANHLFLVD 1050 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + W+ + Q +RI + G ++ V VY I NTI+ + + K I + + Sbjct: 1051 IHWNPQLEAQACDRI-----YRVGQQKPVNVYKFICDNTIESSIQKIQTQKLEIANNIFG 1105 Query: 197 ALK 199 + Sbjct: 1106 GSR 1108 >gi|62543565|ref|NP_031984.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Mus musculus] gi|29427670|sp|Q04692|SMRCD_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1; AltName: Full=ATP-dependent helicase SMARCAD1; AltName: Full=Enhancer trap locus homolog 1; Short=Etl-1 Length = 1021 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 23/195 (11%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAP 70 + + K Q + + + K +AL I+ + Sbjct: 812 LIFEDMEVMTDFELHVLCKQYQ----HINSYQLDMDLILDSGKFRALGCILSELKQKGDR 867 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASC 119 +++ F L L+ + + I E+N + I + + Sbjct: 868 VVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAG 927 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL N+++ + + ++ R + G + V V LI+Q TI+E Sbjct: 928 GLGINLTS-ANVVILHDIDCNP-----YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEES 981 Query: 180 VLQRLRTKSTIQDLL 194 +L+ + K ++ + Sbjct: 982 MLKINQQKLKLEQDM 996 >gi|310765239|gb|ADP10189.1| Non-specific serine/threonine protein kinase [Erwinia sp. Ejp617] Length = 1081 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 67/205 (32%), Gaps = 31/205 (15%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 +G K + + E ++E H K+ + ++ + Sbjct: 866 EGMQQAGTGMLGLLHKLKLICAHPFSVNPEPGYRE-HSPKLNWMLHTLDGIKRSGEDKVI 924 Query: 76 HFNS--DLARLQKAFPQGRTLDK-----------------DPCTIQEWNE-GKIPLLFAH 115 F DL R + R + I ++ ++ Sbjct: 925 VFTELRDLQRELQHAIYQRFGFRPVIINGDTSTKSNSQNSRQKLIDDFQSQPGFDVIILS 984 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN- 174 + G G+N+Q N ++ F+ W+ + E R + G + V+VYY ++ Sbjct: 985 TVAVGFGVNVQK-ANHVIHFTRCWNPAK-----EDQATDRAYRIGQTKDVYVYYPTVRDS 1038 Query: 175 ---TIDELVLQRLRTKSTIQDLLLN 196 T +E + + L + ++ +L+ Sbjct: 1039 EVTTFEETLDELLNRRRSLARDMLS 1063 >gi|150864093|ref|XP_001382790.2| ATPase/DNA helicase [Scheffersomyces stipitis CBS 6054] gi|149385349|gb|ABN64761.2| ATPase/DNA helicase [Scheffersomyces stipitis CBS 6054] Length = 1127 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 23/172 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ-------------K 86 +Y + I L I + +IV F+S L L+ Sbjct: 941 IYLYDPDKSSSKIQALITHLRTIRDSNPGEKVIVFSQFSSYLDILENELKIQGGRDFVIH 1000 Query: 87 AFPQGRTLDKDPCTIQEWNE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F L + + ++N+ + +L + G GLNL + WW Sbjct: 1001 KFDGRLQLSERQKVLDKFNDNTGHDGVTILLLSLKAGGVGLNLTT-ASRAFMMDPWWSPS 1059 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q I+RI + G V V I N+I+ +L+ K I +++ Sbjct: 1060 VEDQAIDRI-----HRIGQNETVKVVRFIMSNSIETKMLKIQERKKQIGEIV 1106 >gi|325675298|ref|ZP_08154983.1| helicase [Rhodococcus equi ATCC 33707] gi|325554004|gb|EGD23681.1| helicase [Rhodococcus equi ATCC 33707] Length = 585 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 62/206 (30%), Gaps = 21/206 (10%) Query: 2 KQYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y E D G IE + Q+ N E K+ Sbjct: 358 EIYDVLLAEAVDDGFGAGIERHGRVLAVLTALKQVCNHPGLITGEMDSLAGRSGKLDLCT 417 Query: 61 VII--EKANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWN-E 106 I+ +P ++ + L + G + + + E Sbjct: 418 DIVATNMETGSPTLIFTQYRRTGEMLVRHLAEQFDVAAPFLHGGLRQSERAEIVSRFQSE 477 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P+L + G GL L + +V F WW+ +E R + G R V Sbjct: 478 DGPPVLVLSLRAAGTGLTLTRAAD-VVHFDRWWNPA-----VEAQASDRAHRIGQTRTVT 531 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQD 192 V L + T++E + K+ + D Sbjct: 532 VTTLTSTTTVEEHIAGMHGRKAALTD 557 >gi|195111727|ref|XP_002000429.1| GI22534 [Drosophila mojavensis] gi|193917023|gb|EDW15890.1| GI22534 [Drosophila mojavensis] Length = 1070 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 21/159 (13%) Query: 52 HDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDP 98 K+ + I++ IV + S L + + + Sbjct: 899 PSTKLLKVLEILKTNVLKTKDKAIVVSQWTSVLDIFRDLLEKEKLKSLSLNGTIPVKNRQ 958 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N+ +L + G GLNL G N L+ L W+ + E R Sbjct: 959 DIVNDFNDPNNSNRILLLSLTAGGVGLNL-IGANHLILLDLHWNPQL-----EAQAQDRI 1012 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V +Y ++ +T+++ + K + D +L Sbjct: 1013 YRVGQKKDVIIYKIVCVDTVEQRIKALQDRKLELADGVL 1051 Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 4/71 (5%), Positives = 20/71 (28%), Gaps = 5/71 (7%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-----VYYDEEKHWKEVHDEKIKA 58 Y ++ + +++ ++ Q+ + +E + + Sbjct: 783 YKMHEKFSRMAGHNKEVKSHEILVLLLRLRQICCHPGLIDSMLEEEGTGKMDDDSDSYTP 842 Query: 59 LEVIIEKANAA 69 ++ + N Sbjct: 843 EIDLLAQLNKM 853 >gi|169620543|ref|XP_001803683.1| hypothetical protein SNOG_13471 [Phaeosphaeria nodorum SN15] gi|160704055|gb|EAT79355.2| hypothetical protein SNOG_13471 [Phaeosphaeria nodorum SN15] Length = 900 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 26/221 (11%), Positives = 66/221 (29%), Gaps = 40/221 (18%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------------EEKHWKE 50 R ++ + + ++ N + E Sbjct: 590 RAATFEIAKRQLMQKKLGNPIMQLRLCCNSPYNFFNPFLKADTDGAETFASETEPDETLV 649 Query: 51 VHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDP 98 K+ L+ ++ + +++ F + L Sbjct: 650 STSGKMLLLDSLLPELISRGHKVLIFSQFTTTLDLLGQYLDLRSWPHARIDGSVAQTDRQ 709 Query: 99 CTIQEWNEGKIP----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N+ + + G G+NL + ++ F W+ ++ + + Sbjct: 710 SQILAFNKTDKKNATNIFILSTRAGGQGINL-AAADTVILFDSDWNPQQ-----DLQAMD 763 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V VY +NT+++ +L+ K ++ L++ Sbjct: 764 RAHRIGQTRNVIVYRFATRNTVEQKLLESAEAKRRLEKLVI 804 >gi|297737996|emb|CBI27197.3| unnamed protein product [Vitis vinifera] Length = 1638 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 51/134 (38%), Gaps = 7/134 (5%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHG 122 ++ +++ + ++ I +N+ K + SCG G Sbjct: 540 FSFQHRVLLTGTPLQNNIGEMYNLVDGSVSVADRQAAIARFNQDKTRFVFLLSTRSCGLG 599 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL + ++ + ++ + + R + G + VY L+ + +++E +LQ Sbjct: 600 INL-ATADTVIIYDSDFNP-----HADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQ 653 Query: 183 RLRTKSTIQDLLLN 196 + K + L +N Sbjct: 654 LAKKKLMLDQLFVN 667 >gi|294654788|ref|XP_456864.2| DEHA2A12276p [Debaryomyces hansenii CBS767] gi|199429151|emb|CAG84839.2| DEHA2A12276p [Debaryomyces hansenii] Length = 771 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 68/194 (35%), Gaps = 31/194 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKE-----------VHDEKIKALEVIIEK--ANAAPIIVA 74 ++ + N + E + K K L+ ++++ + +++ Sbjct: 491 LIIQLRNICNSPYIFYEPFEPYSNKDAQFMDLLLRNSSKFKVLQQLLDELLSKNHKVLIF 550 Query: 75 YHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHG 122 F L + I E+N + + G G Sbjct: 551 SQFTKVLDLINDWLVYENVEICRLDGSMNQSDREEEITEFNAKNSKQQVFLLSTRAGGLG 610 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL + ++ F W+ + I+ + R + G + V +Y + +N+I+E+++ Sbjct: 611 INLTA-SDTVIIFDNDWNPQ-----IDLQAIDRVHRIGQTKPVKIYRFLIKNSIEEILIS 664 Query: 183 RLRTKSTIQDLLLN 196 + +K ++ +++ Sbjct: 665 KSYSKRFLEKIIIQ 678 >gi|291401419|ref|XP_002717032.1| PREDICTED: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Oryctolagus cuniculus] Length = 1027 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 840 HINNFQLDMDLILDSGKFRVLGHILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 899 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 900 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 954 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 955 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1002 >gi|164659924|ref|XP_001731086.1| hypothetical protein MGL_2085 [Malassezia globosa CBS 7966] gi|159104984|gb|EDP43872.1| hypothetical protein MGL_2085 [Malassezia globosa CBS 7966] Length = 789 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 56/158 (35%), Gaps = 17/158 (10%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ-----------K 86 + + D ++ L+ ++ IV F S L ++ + Sbjct: 631 HGIIWGMPGTMSTKLDMMLRLLDDFDNQSKGDKTIVFSQFTSFLDLVEDALRARGYNFTR 690 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 R ++ + + + ++ + GLNL N ++ LWW+ + Sbjct: 691 YDGSMRRNAREEALQRIRTDDGVRVILISFKAGSTGLNLT-CCNRVILCDLWWNPQ---- 745 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 IE R + G ++V++Y L T+++ +L Sbjct: 746 -IEEQAFDRAHRLGQTKSVYIYKLSIDGTVEQRILALQ 782 Score = 36.3 bits (82), Expect = 2.9, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 12/42 (28%), Gaps = 3/42 (7%) Query: 4 YHKFQRELYCDLQGENIEAFN---SASKTVKCLQLANGAVYY 42 YH+ + + L N + ++ Q N Sbjct: 520 YHELEDRIQSHLDANKSPQLNYMGALVMLLRLRQACNHPALV 561 >gi|296195978|ref|XP_002745629.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform 1 [Callithrix jacchus] gi|296195980|ref|XP_002745630.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform 2 [Callithrix jacchus] Length = 1027 Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 840 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 899 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 900 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 954 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 955 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1002 >gi|269128789|ref|YP_003302159.1| SNF2-like protein [Thermomonospora curvata DSM 43183] gi|268313747|gb|ACZ00122.1| SNF2-related protein [Thermomonospora curvata DSM 43183] Length = 746 Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 62/152 (40%), Gaps = 17/152 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQ 102 K++ L ++++ N ++V F LA +Q+ + + + Sbjct: 557 SAKLQRLCELVKEAEENGHKVVVFSFFRDVLATVQRALGPAALGPLTGSLSAARRQQLVD 616 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E+ +L + + G GLNLQ ++++ E V R + G Sbjct: 617 EFTAHPGHAVLLSQIQAGGVGLNLQA-ASVVIICEPQLKPTL-----EAQAVARAHRMGQ 670 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R V V+ L+ +++D+ +++ LR KS + D Sbjct: 671 VRKVQVHRLLVADSVDQRIMELLRHKSALFDE 702 >gi|294955608|ref|XP_002788590.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] gi|239904131|gb|EER20386.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] Length = 857 Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 29/205 (14%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK------EVHDEKIK----ALEVIIEK 65 G++ + N A+ +L N + K KI+ +E + + Sbjct: 641 DGDDADDGNLAACMSGLRELQNDPRLPRKHSILKRAPVANFESSSKIEALVAEVEAMRKA 700 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEW---NEGKIPLL 112 A +V F S L Q + L ++ + + PLL Sbjct: 701 DGEAKGLVFSSFVSLLELCQYRLHKAGITTLILHGELPLPLRAKVMKTFVESSADTCPLL 760 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G GLNLQ N + WW+ Q R + G + V V ++ Sbjct: 761 LISLMSGGEGLNLQ-VANHVFLLDPWWNPAVEQ-----QATQRAHRLGQSKRVQVLKMLT 814 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 +TI++ ++ K + +++ Sbjct: 815 HDTIEDRIVALQEKKRAVCRGIIDG 839 >gi|238880168|gb|EEQ43806.1| conserved hypothetical protein [Candida albicans WO-1] Length = 1097 Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 20/163 (12%) Query: 46 KHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 K + K+ L I+++ +++ F L L++ Sbjct: 932 GDEKFLDSGKVIELGKILQQIIDNKGEKVLIFSLFTQVLDILERVLSIFNYKFARLDGNT 991 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + I +N + KI + + G G+NL N ++ F ++ ++ Sbjct: 992 PVQERQDLIDLFNQDDKIHIFLISTKAGGVGINLVA-ANHVIMFDQSFNP-----HEDKQ 1045 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + V VY LI+ TI++ + R K + + + Sbjct: 1046 AEDRAHRVGQTKEVKVYRLISDETIEKNIFSVARNKLELDEKI 1088 >gi|170085783|ref|XP_001874115.1| RAD5-like protein [Laccaria bicolor S238N-H82] gi|164651667|gb|EDR15907.1| RAD5-like protein [Laccaria bicolor S238N-H82] Length = 1156 Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 62/177 (35%), Gaps = 22/177 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEKANA----APIIVAYHFNSDLAR----------LQKAFPQ 90 + K+ AL + K +V F S L Q F Sbjct: 976 FRRNDFQSSTKLNALIKSLCKLRDQDPCFRAVVFSQFTSFLDLIQVALERERFDQYRFDG 1035 Query: 91 GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + K I E+ K +L + G GLNL N + WW+ Q I Sbjct: 1036 TMDVKKKSAAINEFKSFSRKGKVLVVSLKAGGVGLNLTA-ANHVFMMDCWWNAATENQAI 1094 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +R+ + G ++ V+V + I NTI+ +LQ + K+ I + K + + Sbjct: 1095 DRV-----HRIGQEKTVYVTHFIVANTIESRILQIQKRKTAIVNEAFRGSKSDPESI 1146 >gi|255519616|dbj|BAA86436.2| KIAA1122 protein [Homo sapiens] Length = 1040 Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 853 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 912 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 913 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 967 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 968 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1015 >gi|221507795|gb|EEE33382.1| helicase, putative [Toxoplasma gondii VEG] Length = 2556 Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 8/122 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + I+++N + + G G+NL N +V Sbjct: 1233 YCHYRGWKYLRLDGSTNKFVRELDIRDFNSENSTYFVYLISTRAGGLGINLTS-ANHVVL 1291 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ I+ + R + G +RAV V+ L+ + T++E + R K + LL Sbjct: 1292 YDHDWNP-----FIDLQAIDRAHRIGQQRAVHVWSLVNEWTVEERMAFRREQKLRLDKLL 1346 Query: 195 LN 196 + Sbjct: 1347 VQ 1348 >gi|221483307|gb|EEE21626.1| helicase, putative [Toxoplasma gondii GT1] Length = 2556 Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 8/122 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + I+++N + + G G+NL N +V Sbjct: 1233 YCHYRGWKYLRLDGSTNKFVRELDIRDFNSENSTYFVYLISTRAGGLGINLTS-ANHVVL 1291 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ I+ + R + G +RAV V+ L+ + T++E + R K + LL Sbjct: 1292 YDHDWNP-----FIDLQAIDRAHRIGQQRAVHVWSLVNEWTVEERMAFRREQKLRLDKLL 1346 Query: 195 LN 196 + Sbjct: 1347 VQ 1348 >gi|237839503|ref|XP_002369049.1| SNF2 family N-terminal domain containing protein [Toxoplasma gondii ME49] gi|211966713|gb|EEB01909.1| SNF2 family N-terminal domain containing protein [Toxoplasma gondii ME49] Length = 2556 Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 8/122 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + I+++N + + G G+NL N +V Sbjct: 1233 YCHYRGWKYLRLDGSTNKFVRELDIRDFNSENSTYFVYLISTRAGGLGINLTS-ANHVVL 1291 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ I+ + R + G +RAV V+ L+ + T++E + R K + LL Sbjct: 1292 YDHDWNP-----FIDLQAIDRAHRIGQQRAVHVWSLVNEWTVEERMAFRREQKLRLDKLL 1346 Query: 195 LN 196 + Sbjct: 1347 VQ 1348 >gi|312216637|emb|CBX96587.1| similar to DNA repair protein rad5 [Leptosphaeria maculans] Length = 1192 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 19/151 (12%) Query: 68 AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP-LLFAHP 116 A +V F S L ++ F + + + E+ P +L Sbjct: 1040 DAKTVVFSQFTSFLDLIEPALARDHIPFLRFDGSISQKQRAHILTEFTASPKPYVLLLSL 1099 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL N + WW +E + R + G +R V V + Q +I Sbjct: 1100 RAGGVGLNLT-CANKVFMMDPWWSFA-----VEAQAIDRVHRMGQEREVKVVRFVVQGSI 1153 Query: 177 DELVLQRLRTKSTIQDL--LLNALKKETIHV 205 +E +L+ K I +++ +K + Sbjct: 1154 EEKMLRIQERKKFIASSLGMMSDEEKRVQRI 1184 >gi|319411618|emb|CBQ73662.1| probable RAD16-nucleotide excision repair protein [Sporisorium reilianum] Length = 1070 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 47/146 (32%), Gaps = 17/146 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIP 110 + + +V F + L + ++ + Sbjct: 911 LRSEDKTIKSLVFSQFVNFLDLIAFRLQRAGFQICRLEGNMSPEARNRTIKHFMENPGVT 970 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G LNL + + WW+ Q ++RI + G R + V + Sbjct: 971 VFLVSLKAGGVALNLTE-ASRVYLMDPWWNPSVEVQAMDRI-----HRLGQHRPIIVKRM 1024 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 + +N+I+ +++ KS + + + Sbjct: 1025 VIENSIESRIIELQNKKSAMIEAAIG 1050 >gi|307107791|gb|EFN56033.1| hypothetical protein CHLNCDRAFT_22847 [Chlorella variabilis] Length = 480 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 21/211 (9%), Positives = 57/211 (27%), Gaps = 38/211 (18%) Query: 5 HKFQRELYCDLQGENIEAFN-------SASKTVKCLQL---ANGAVYYDEEKHWKEVHDE 54 + ++L E + + AS +Q+ N Sbjct: 267 RELNQQLLDKTLNEEMNKMSRGRGGPSVASLNNVLMQMRKNCNHPDLITGPFDGSVFFPS 326 Query: 55 KIKALEVI-----------IEKANAAPIIVAYHFNSDLARL----------QKAFPQGRT 93 + + +++ + L L Sbjct: 327 PEEMVRDCGKMALLDRLLTRLLPEGHKVLIFSQMTTMLDLLSSYLEQREVGHCRIDGSIC 386 Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ +N + + + G G+NL + + + W+ + + Sbjct: 387 WQDRQENMKRFNEDPDCKVFLLSTRAGGLGINLTA-ADTCIIYDSDWNPHQ-----DLQA 440 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + R + G ++ V V L ++++ +L+R Sbjct: 441 MDRCHRIGQQKPVLVMRLATAHSVEGKMLRR 471 >gi|328854066|gb|EGG03201.1| hypothetical protein MELLADRAFT_90365 [Melampsora larici-populina 98AG31] Length = 863 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 19/167 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQG----- 91 + K L+ ++ K A +++ + + L Q Sbjct: 657 HRKHHYSADADTELCGKWLVLKPLLQQWKKEGAKVLIFSQWTKMMDILSYWLEQDFPGFV 716 Query: 92 ------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 T ++ + + + A + G GLNL N +V F W+ Sbjct: 717 RLDGKVPTAERMARVDEFQRDPDKFIFLASTLAGGVGLNLTA-ANKVVIFDPSWNPSS-- 773 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + R + G KR+V LIA T +EL+ R K+ + + Sbjct: 774 ---DAQAMDRVCRIGQKRSVECLRLIALGTAEELIYHRQVYKTHLAE 817 >gi|321468268|gb|EFX79254.1| hypothetical protein DAPPUDRAFT_188325 [Daphnia pulex] Length = 1009 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 13/130 (10%) Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQY 127 I + FN D RL +N + L + G G+NL Sbjct: 782 PIGTWRFNHDYFRLDGQTSAEL----RKNACNAFNNPSNLRSRLFLISTKAGGLGINLVA 837 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 N ++ F W+ Q I R+ + G K+ ++Y +AQ T++E + R TK Sbjct: 838 -ANRVIIFDASWNPSHDVQSIFRV-----YRFGQKKPCYIYRFLAQGTMEEKIYDRQVTK 891 Query: 188 STIQDLLLNA 197 ++ +++ Sbjct: 892 LSLSCRVVDE 901 >gi|31322808|gb|AAP31846.1| Brg1p [Tetrahymena thermophila] Length = 1228 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 70/193 (36%), Gaps = 27/193 (13%) Query: 26 ASKTVKCLQLANGAVYY-----DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFN 78 + ++ + N + + K + L+ ++ K +++ Sbjct: 702 MNLMMQLKKCCNHPYLFLNSDAYQIDDMIWKVSGKFELLDKMLAKLIRTGHRVLIFTQMT 761 Query: 79 SDLARLQKAF------------PQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLN 124 + +++ F D+ + ++N+ P + + G GLN Sbjct: 762 HVMDLMEEYFKLREDYIKYLRLDGTTKADERGVKMAQFNQPNSPYNVFILSTRAGGLGLN 821 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ + ++ F W+ + +++ R + G K V VY L+ I+E +L + Sbjct: 822 LQT-ADTVIIFDSDWNPQ-----MDQQAQDRAHRIGSKSEVRVYRLVTNTWIEEEILSKA 875 Query: 185 RTKSTIQDLLLNA 197 K + ++++ A Sbjct: 876 AYKMGLDEMIIQA 888 >gi|327268904|ref|XP_003219235.1| PREDICTED: transcription termination factor 2-like [Anolis carolinensis] Length = 1233 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 24/237 (10%), Positives = 56/237 (23%), Gaps = 66/237 (27%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-------------------------- 54 + S ++ Q + E Sbjct: 984 TTIHILSLLLRLRQCCCHLSLLKVALDQANLASEGISLTLEEQLNALTLSEPDSSDPQSV 1043 Query: 55 --------------------KIKALEVIIEKANAA--PIIVAYHFNSDLA---------- 82 K+ L ++ ++ + S L Sbjct: 1044 VYLFGAAFSVELFEATRQSTKLSHLLNELKAIQGHSQKSVIVSQWTSMLKVVAVHLKKLG 1103 Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + ++E+N ++ G GGN L + W+ Sbjct: 1104 LKYATVDGSVNPKQRMDVVEEFNNNPKGPEVMLISLL-AGGVGLNLVGGNHLFLLDMHWN 1162 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q +RI + G + V ++ + + T++E + + K + +L+ Sbjct: 1163 PALEDQACDRI-----YRVGQRNDVTIHRFVCKRTVEEKISELQTKKKELAQKVLSG 1214 >gi|313227060|emb|CBY22207.1| unnamed protein product [Oikopleura dioica] Length = 402 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 51/121 (42%), Gaps = 7/121 (5%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + I+++ + +P +L + G+N+ +V F + W+ Sbjct: 1 MRIDGSCGSMEREKIIKKFTDFPLPSILIISTRAGCVGINVTA-ATRVVMFDVSWNP--- 56 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + + V R + G ++A F+Y L+A ++ + +R K+++ +++ + + Sbjct: 57 --VHDAQAVCRIYRIGQEKACFIYRLVADGCMERAIYERQVAKTSLSRRIVDEKNIDRLR 114 Query: 205 V 205 V Sbjct: 115 V 115 >gi|313218173|emb|CBY41468.1| unnamed protein product [Oikopleura dioica] Length = 402 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 51/121 (42%), Gaps = 7/121 (5%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + I+++ + +P +L + G+N+ +V F + W+ Sbjct: 1 MRIDGSCGSMEREKIIKKFTDFPLPSILIISTRAGCVGINVTA-ATRVVMFDVSWNP--- 56 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + + V R + G ++A F+Y L+A ++ + +R K+++ +++ + + Sbjct: 57 --VHDAQAVCRIYRIGQEKACFIYRLVADGCMERAIYERQVAKTSLSRRIVDEKNIDRLR 114 Query: 205 V 205 V Sbjct: 115 V 115 >gi|261198487|ref|XP_002625645.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] gi|239594797|gb|EEQ77378.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] Length = 929 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 20/163 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA-----------F 88 +E E KI+AL I+ +A +V + S L ++ Sbjct: 746 NEIDIDPETTSSKIEALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLARNGITFARID 805 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + +D N+ +L A C GLNL N ++ WW I Sbjct: 806 GRMSSAKRDAAMKALSNDPNCTVLLASLNVCSVGLNLVA-ANQVILADSWWAPA-----I 859 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 E V R + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 860 EDQAVDRVYRLGQKRPTTIWRLVMENSIEDRVLHKQKEKRTLM 902 >gi|242791161|ref|XP_002481703.1| chromatin remodeling complex subunit (Chd3), putative [Talaromyces stipitatus ATCC 10500] gi|218718291|gb|EED17711.1| chromatin remodeling complex subunit (Chd3), putative [Talaromyces stipitatus ATCC 10500] Length = 1597 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 35/199 (17%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII---------------EKANAAPIIV 73 ++ + Y + +E + ++ K +++ Sbjct: 1017 LMQLRKCLCHPFVYS--RQIEERTSNPTLSHRNLVEASGKLRLLELLLPRLKERGHRVLL 1074 Query: 74 AYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGH 121 F +L + I +N S G Sbjct: 1075 FSQFLDNLDIVEDFLDGLGLFYCRLDGSMGAHEKQKKIDAFNAPDSTYFAFLLSTRSGGV 1134 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL + ++ ++ + + ++R + G ++ V V+ L+ + + +E ++ Sbjct: 1135 GINL-ATADTVIIMDPDFNPHQ-----DIQALSRAHRIGQQKKVLVFQLMTRESAEEKIM 1188 Query: 182 QRLRTKSTIQDLLLNALKK 200 Q + K + +L+ + Sbjct: 1189 QIGKKKMALDHVLIEKMDA 1207 >gi|299756460|ref|XP_001829349.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130] gi|298411686|gb|EAU92309.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130] Length = 1155 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 18/139 (12%) Query: 69 APIIVAYHFNSDLA---------RLQKAFPQGRTL-DKDPCTIQEWNEG--KIPLLFAHP 116 +V F S L R + G K I ++ K +L Sbjct: 998 FRAVVFSQFTSFLDLIQVVLTRERFEHYRFDGTMDVKKRGAAISDFKAPSRKPKILVVSL 1057 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL N + WW+ Q I+R+ + G ++ V+V + + NTI Sbjct: 1058 KAGGVGLNLTA-ANHVFMMDCWWNAATENQAIDRV-----HRIGQEKTVYVKHFVISNTI 1111 Query: 177 DELVLQRLRTKSTIQDLLL 195 + +LQ + K+ I + Sbjct: 1112 EGRILQIQKRKTAIVNEAF 1130 >gi|327351006|gb|EGE79863.1| SNF2 family helicase [Ajellomyces dermatitidis ATCC 18188] Length = 931 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 20/163 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA-----------F 88 +E E KI+AL I+ +A +V + S L ++ Sbjct: 748 NEIDIDPETTSSKIEALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLARNGITFARID 807 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + +D N+ +L A C GLNL N ++ WW I Sbjct: 808 GRMSSAKRDAAMKALSNDPNCTVLLASLNVCSVGLNLVA-ANQVILADSWWAPA-----I 861 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 E V R + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 862 EDQAVDRVYRLGQKRPTTIWRLVMENSIEDRVLHKQKEKRTLM 904 >gi|312217906|emb|CBX97853.1| hypothetical protein [Leptosphaeria maculans] Length = 1064 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 69/210 (32%), Gaps = 34/210 (16%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--- 65 ++ L+ + + A+K +L + KI+ ++ + Sbjct: 859 KKTLAQLKKD--SLRSKAAKKKYLRRL-----------EKTYIPSAKIEKTMALLAEIAE 905 Query: 66 -ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLF 113 + ++ F S L + + +D+ + + ++ ++ Sbjct: 906 NDPSEKTLIFSQFTSLLDLVEVPLSQRKIRYQRYDGSMKMDERADAVNAFMDDPDENVML 965 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + GLNL + ++ +W+ IE V R + R V V+ ++ Sbjct: 966 VSLKAGNAGLNLWK-ASQVIVLDPFWNP-----FIEDQAVDRAHRMPQPREVHVHRVLVP 1019 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETI 203 T+++ + K I L+ +++ Sbjct: 1020 ETVEDRICVLQDKKREIIGAALDEQASKSL 1049 Score = 37.8 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 4/53 (7%), Positives = 13/53 (24%), Gaps = 6/53 (11%) Query: 2 KQYHKFQRELYCD----LQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHW 48 + Y + + ++ + A N ++ Q + Sbjct: 602 ELYKALETKSQLQMNRFIERNAVTANYANVLCLLLRLRQACCHPHLIKDLSQP 654 >gi|170754301|ref|YP_001781764.1| phage helicase [Clostridium botulinum B1 str. Okra] gi|169119513|gb|ACA43349.1| phage helicase [Clostridium botulinum B1 str. Okra] Length = 365 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 83/203 (40%), Gaps = 23/203 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y KF+++ + + S +K + QLA+ + + K+ +L+ Sbjct: 182 KEYKKFKKDRLITINDTELVGDTSLTKMLYLRQLAS------------QYNPNKLSSLKD 229 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAF----PQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 ++E +I+ Y+F ++ ++++ ++ ++ + ++ Sbjct: 230 LLESTED-RVIIFYNFTEEMEQIKEVCGRLEKPISIVNGQTKDLENYKTKDNTVVLVQYQ 288 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLNLQ N ++++SL E + R + G R +YLI + I+ Sbjct: 289 AGAMGLNLQ-LSNKIIYYSLPLASELFE-----QSKKRTHRIGQTRTCMYWYLITKGCIE 342 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 E + + L+ + + L L+ Sbjct: 343 EQIFETLKERRDYTNKLFEELEG 365 >gi|85690939|ref|XP_965869.1| helicase DNA-binding protein [Encephalitozoon cuniculi GB-M1] gi|19068436|emb|CAD24904.1| similarity to CHROMODOMAIN HELICASE DNA-BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1] Length = 1251 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 26/261 (9%), Positives = 64/261 (24%), Gaps = 70/261 (26%) Query: 2 KQYHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y + L +G A N + ++ + + K K Sbjct: 546 RFYRAILEKNIEFLTKGGKESAPNLLNVMMELRKCCIHPYLIKGAEEQILSGYLKKKRER 605 Query: 61 --------------VIIEKANA-------------------------------------A 69 ++ + Sbjct: 606 SKAEGAENDITLTSEVLNEDEHQDGNSVISDIDEYYKIFIQSSGKLVLLDKLLGKLKDGH 665 Query: 70 PIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPA 117 +++ L + G + I +++ + + Sbjct: 666 KVLIFSQMTRCLDLLAEYLAYRKYKYERIDGGARTENRQAAIDRFSDKTSDVFVFLLSTR 725 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + ++ F W+ + + R + G V VY L+ +NT + Sbjct: 726 AGGVGINLTA-ADTVIIFDSDWNPQN-----DLQAQARCHRIGQTSEVKVYRLVTENTYE 779 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 + + K + +L + Sbjct: 780 REMFDKAGLKLGLDRAVLQKM 800 >gi|311262809|ref|XP_003129366.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Sus scrofa] Length = 1027 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 840 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 899 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 900 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 954 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 955 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1002 >gi|307197496|gb|EFN78730.1| Transcription termination factor 2 [Harpegnathos saltator] Length = 935 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 8/111 (7%) Query: 95 DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 P I +N +L + G GLNL G N L+ F + W+ + Q +RI Sbjct: 817 KDRPAIIDSFNKSNSDPRILLLSLTAGGVGLNL-VGANHLLLFDIHWNPQLESQAQDRI- 874 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G K+ V++Y I NTI+E + K I +L+ + + I Sbjct: 875 ----YRFGQKKDVYIYKFICSNTIEERIKGLQEQKLAIAQNVLSGDRSKEI 921 >gi|226292675|gb|EEH48095.1| chromodomain helicase DNA binding protein [Paracoccidioides brasiliensis Pb18] Length = 690 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 55/155 (35%), Gaps = 19/155 (12%) Query: 53 DEKIKALEVII--EKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCT 100 K+ L ++ K N ++ F + +++ Sbjct: 489 SGKVDKLCELLRRFKENGDRTLIFSQFTMVMDILEHVLQTVQMPFFRLDGSTSVEDRQAI 548 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++E +IP+ + G G+NL N ++ F ++ + + R + Sbjct: 549 LDAFHEQVEIPVFLLSTKAGGAGVNL-ACANKVIIFDSSFNPQ-----EDVQAENRAHRV 602 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G R V V L+ + TI+E + +TK + + Sbjct: 603 GQTREVEVVRLVTRGTIEEQMYALGQTKLALDQRV 637 >gi|213407960|ref|XP_002174751.1| DNA repair protein RAD16 [Schizosaccharomyces japonicus yFS275] gi|212002798|gb|EEB08458.1| DNA repair protein RAD16 [Schizosaccharomyces japonicus yFS275] Length = 930 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 17/147 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPAS 118 IV F S L + + G T TIQ + + I + + Sbjct: 779 KSIVFSQFTSMLDLVHWRLRKAGFNCVKLEGGMTPKARDATIQAFCTDINITVFLVSLKA 838 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q ++RI + G +R + + L +N+I+ Sbjct: 839 GGIALNLTE-ASQVFMLDPWWNGAVQWQAMDRI-----HRIGQRRPIRITTLCIENSIES 892 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 +++ K+ + ++ +K + Sbjct: 893 KIIELQEKKAQMIHATIDRDEKALNQL 919 >gi|225431683|ref|XP_002264260.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296088517|emb|CBI37508.3| unnamed protein product [Vitis vinifera] Length = 1043 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 63/212 (29%), Gaps = 27/212 (12%) Query: 7 FQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEV 61 + D+ N K A E + E + K+ + Sbjct: 638 LTKRAVEDVLEGMDSMLNQEDLGMASKL---AMHLATAYERDDFLEKNDNVSSKMSFILA 694 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK- 108 +++ +++ L +++ + + ++ +G Sbjct: 695 LLDTLIPEGHNVLIFSQTRKMLNLIEELLISNGYKFLRIDGTTKANDRVKIVNDFQDGVG 754 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 P+ G GL L + ++ W+ Q ++R + G + V VY Sbjct: 755 APIFLLTSQVGGLGLTLTK-ADRVIVVDPAWNPSTDNQSVDR-----AYRIGQTKDVIVY 808 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 L+ TI+E + ++ K + ++ Sbjct: 809 RLMTCGTIEEKIYRKQIFKGGLFRTATEHKEQ 840 >gi|156097905|ref|XP_001614985.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148803859|gb|EDL45258.1| hypothetical protein, conserved [Plasmodium vivax] Length = 1102 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 83 RLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 ++ + I+ + + + + G GLNL N ++ W+ Sbjct: 974 QIYVRLDGSTNTIERQKIIKRFSKNDNVFIFLLSTKAGGVGLNL-IAANHVILMDQDWNP 1032 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 +R R + G K V++Y L +NTI+E +L+ + K + Sbjct: 1033 -----HNDRQAEDRVHRLGQKNEVYIYRLCCKNTIEETILRCCKAKLHLDQA 1079 >gi|331245961|ref|XP_003335615.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314605|gb|EFP91196.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 894 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 69/187 (36%), Gaps = 16/187 (8%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 L + I + ++ + G + + K + K K V+I + + + Sbjct: 319 LPKKEINVYVGMTEMQRK----CGKMIILD----KLLKAMKAKGSRVLIFSQMSRVLDIL 370 Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNIL 132 + + I E+N+ + + G G+NL +I+ Sbjct: 371 EDYCFFRQYEYCRIDGQTAHEDRIGAIDEYNKEGSSKFVFLLTTRAGGLGINLTT-ADIV 429 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V F W+ + + + R + G K+ V+V+ + +N ++E VL+R K + Sbjct: 430 VLFDSDWNPQA-----DLQAMDRAHRIGQKKQVYVFRFVTENAVEEKVLERAAQKLRLDQ 484 Query: 193 LLLNALK 199 L++ + Sbjct: 485 LVIQQGR 491 >gi|302845240|ref|XP_002954159.1| hypothetical protein VOLCADRAFT_30537 [Volvox carteri f. nagariensis] gi|300260658|gb|EFJ44876.1| hypothetical protein VOLCADRAFT_30537 [Volvox carteri f. nagariensis] Length = 462 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 22/202 (10%), Positives = 56/202 (27%), Gaps = 49/202 (24%) Query: 29 TVKCLQLANGAV---YYDEEKHWKEVHDEK----------IKALEVIIEK---------- 65 ++ + N + E H + + ++++ Sbjct: 267 VMEMRNICNHPFISKLHPELGESFLPHTAQRHCGLPPLVTLCGKMELLDRLLVRLHNHHT 326 Query: 66 --------ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 +++ L +++ + I ++N Sbjct: 327 TGGCGGCGGFRHKVLLFATMTRALDLVEEYLEWRGFEWARLDGSTAAAERGALIADFNRP 386 Query: 108 KIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNLQ + ++ + W+ + + R + G R V Sbjct: 387 DSDTFIFLLSLKAGGVGLNLQA-ADTVILYDTDWNPQL-----DLQAQARAHRIGQTREV 440 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 V+ L+ TI++ + K Sbjct: 441 RVFRLLTAGTIEQHIAAVAEEK 462 >gi|258572294|ref|XP_002544909.1| hypothetical protein UREG_04426 [Uncinocarpus reesii 1704] gi|237905179|gb|EEP79580.1| hypothetical protein UREG_04426 [Uncinocarpus reesii 1704] Length = 703 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 60/193 (31%), Gaps = 26/193 (13%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-------KHWKEVHDEKIKAL 59 +R L + I + + ++ N + K+ L Sbjct: 507 IERVKTMKLAKKEIASKKLQNPIMQARLACNSPHNFYWPWDEDSNIDESIVTSSGKMLLL 566 Query: 60 EVIIEK--ANAAPIIVAYHFN------SDLARLQKAFPQ----GRTLDKDPCTIQEWN-E 106 + ++ + I++ F D A L+ + I +N + Sbjct: 567 DRLVPCLLSKGHKILLFSQFKTQLDILQDWAYLRDWNCCRIDGAVSQVDRQAQIYAFNTD 626 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G G+NL + ++ + W+ ++ + R + G + V Sbjct: 627 SNYKIFLLSTRAGGQGINLTA-ADTVILYDSDWNPQQ-----DLQAQDRAHRIGQTKPVL 680 Query: 167 VYYLIAQNTIDEL 179 VY L + T+++ Sbjct: 681 VYRLATRGTVEQR 693 >gi|213404686|ref|XP_002173115.1| ISWI chromatin-remodeling complex ATPase ISW2 [Schizosaccharomyces japonicus yFS275] gi|212001162|gb|EEB06822.1| ISWI chromatin-remodeling complex ATPase ISW2 [Schizosaccharomyces japonicus yFS275] Length = 913 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 71/203 (34%), Gaps = 20/203 (9%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIE 64 + ++Y D + I + QL + + + K+ L+ ++ Sbjct: 695 MREDVYADANEQYIFEDMQVMSDFELHQLCVRFPSIKRFALEGTPWMQTAKVLRLQKLLN 754 Query: 65 KAN-AAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLL 112 + I+V F L L+ ++ I + + K L Sbjct: 755 EFKKDDRILVFSQFTQVLDILEFALKSMDVKYLRMDGSTPVETRQGLIDMFSTKPKYKLF 814 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL N+++ + ++ + + R + G R V +Y L+ Sbjct: 815 LLSTKAGGFGINLTA-ANVVIMYDCSFNPFD-----DLQAEDRAHRVGQTRPVSIYRLVT 868 Query: 173 QNTIDELVLQRLRTKSTIQDLLL 195 +NTIDE + + K ++ ++ Sbjct: 869 ENTIDENIQKLAFAKLALESSMV 891 >gi|39971679|ref|XP_367230.1| hypothetical protein MGG_07155 [Magnaporthe oryzae 70-15] gi|145019630|gb|EDK03858.1| hypothetical protein MGG_07155 [Magnaporthe oryzae 70-15] Length = 1096 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 53/147 (36%), Gaps = 17/147 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKI 109 ++ +V + S L ++ A + + + + Sbjct: 928 ELMPDEPPIKSVVFSGWTSHLDLIEIALDKAGITHTRLDGKMSRLARTQAMDRFREDPSV 987 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ + G GLNL GN + ++ Q ++R+ + G KR V + Sbjct: 988 HVILVSIMAGGLGLNLTA-GNHVYVMEPQYNPAAEAQAVDRV-----HRLGQKRPVRIIR 1041 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 I +N+ +E ++ + K + +L ++ Sbjct: 1042 YIMENSFEEQMVALQQKKIKLANLSMD 1068 >gi|82914730|ref|XP_728823.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23485366|gb|EAA20388.1| Arabidopsis thaliana BRAHMA ortholog-related [Plasmodium yoelii yoelii] Length = 1529 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 29/237 (12%), Positives = 72/237 (30%), Gaps = 48/237 (20%) Query: 3 QYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY---DEEKHWKEVHDEKIKA 58 Y + + + + + + + ++ ++ N + + + K + Sbjct: 896 LYKQIENKNFKQINSDGTLNNKTFQNTIMQLRKIVNHPFLFTHDYDINDFVIKSSGKFEV 955 Query: 59 LEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 L+ ++ K I++ +L I +N+ Sbjct: 956 LDRMLPKLIKFKHKILLFCQMTKVMDIISDYFELRKYKYHRLDGSVSLSDRRDIIDSFNQ 1015 Query: 107 --------------------------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + S GLNLQ + ++ F ++ Sbjct: 1016 NKFVKNSDNSSQNKNDSLLLDPASKLDDTMIFILSTRSGSLGLNLQA-ADTVIIFDSDFN 1074 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G K V V+ I ++++EL+ Q+ + K I D ++ A Sbjct: 1075 PHQ-----DIQAMCRCHRIGQKNVVKVFRFITLSSVEELIFQKAKDKLNINDKVIQA 1126 >gi|325119107|emb|CBZ54659.1| putative SNF2 family N-terminal domain containing protein [Neospora caninum Liverpool] Length = 2550 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 8/122 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + I+++N + + G G+NL N +V Sbjct: 1254 YCHYRGWKYLRLDGSTNKFVRELDIRDFNSENSTYFVYLISTRAGGLGINLTA-ANHVVL 1312 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ I+ + R + G +RAV V+ L+ + T++E + R K + LL Sbjct: 1313 YDHDWNP-----FIDLQAIDRAHRIGQQRAVHVWSLVNEWTVEERMAFRREQKLRLDKLL 1367 Query: 195 LN 196 + Sbjct: 1368 VQ 1369 >gi|219122179|ref|XP_002181429.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407415|gb|EEC47352.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 902 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 66/250 (26%), Gaps = 61/250 (24%) Query: 3 QYHKFQ--RELY--CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-------- 50 Y F +E L GE + + K + +E Sbjct: 432 MYSDFVDSKESVVSSILSGETRSPLEAVTWLKKL---CGHPILAEELAINVGRLLATASP 488 Query: 51 ----VHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 K+ L +I + N ++ L ++K Sbjct: 489 DDLVQQSAKLCILLSLIENFRQNGHRTLIFSQSTKMLDIIEKTLLSEGVELLRIDGSSKE 548 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWD------------ 140 + ++N + + G GL L G + ++ + W Sbjct: 549 QDRQRFVDDFNSNTSTTDAMLLSTKAAGVGLTL-VGADRVIIYDPSWYVSEARFALQEQR 607 Query: 141 ---------------LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 L + V R + G R V VY LIA T++E + ++ Sbjct: 608 HLECAIAVTLLLFSLLSNRTPAEDSQAVDRCYRIGQTRDVVVYRLIAAGTVEEKMYEKQV 667 Query: 186 TKSTIQDLLL 195 K I+ + Sbjct: 668 HKDGIRRTVF 677 >gi|297293034|ref|XP_002804185.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like isoform 1 [Macaca mulatta] gi|297293036|ref|XP_002804186.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like isoform 2 [Macaca mulatta] Length = 1028 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 841 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 900 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 901 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 955 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 956 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1003 >gi|226287268|gb|EEH42781.1| DNA excision repair protein (Rad26L) [Paracoccidioides brasiliensis Pb18] Length = 1025 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 48/139 (34%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 N ++V H L LQ F T D + +N + + + Sbjct: 625 HRNGDKVLVFSHNVRLLKMLQMLFKHTSYNVSYLDGSMTYDNRAKAVDNFNADPREFVFL 684 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G R V V+ LI+ Sbjct: 685 ISTRAGGIGLNITS-ANKVVVVDPNWNPA-----FDLQAQDRAYRIGQSRDVEVFRLISA 738 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 739 GTIEEIVYARQIYKQQQAN 757 >gi|225453462|ref|XP_002274161.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 983 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 28/232 (12%), Positives = 76/232 (32%), Gaps = 41/232 (17%) Query: 2 KQYHK-FQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEV 51 K Y ++EL + + ++ + + + EE Sbjct: 410 KVYMSILRKELPKLLAFSSGPSGHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQ 469 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPC 99 K+ L+ +++K + +++ L LQ ++ Sbjct: 470 ASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQDFMELRKYSYERLDGSVRAEERFS 529 Query: 100 TIQEWNEGKI-------------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I+ ++ + + + G GLNL + ++F+ W+ + Sbjct: 530 AIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGVGLNLVA-ADTVIFYEQDWNPQ---- 584 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +++ + R + G V L+ T++E++++R K + ++ + Sbjct: 585 -VDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNVVGEV 635 >gi|212534796|ref|XP_002147554.1| chromatin remodeling complex subunit (Chd3), putative [Penicillium marneffei ATCC 18224] gi|210069953|gb|EEA24043.1| chromatin remodeling complex subunit (Chd3), putative [Penicillium marneffei ATCC 18224] Length = 1605 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 27/235 (11%), Positives = 72/235 (30%), Gaps = 41/235 (17%) Query: 2 KQYHKFQRE---LYCDLQGENIEAFNSASK-------TVKCLQLANGAVYYD-------- 43 K Y + L + N +A N ++ ++ + Y Sbjct: 982 KLYKSILAKNSKLIKSIFQSNQDAQNKQNERHSLSNILMQLRKCLCHPFVYSRQIEERIS 1041 Query: 44 -----EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL----------QKAF 88 + ++ L + K +++ F +L + Sbjct: 1042 NPTLSHRNLVEASGKLQLLELLLPRLKERGHRVLLFSQFLDNLDIVEDFLDGLGLLYCRL 1101 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + I +N S G G+NL + ++ ++ + Sbjct: 1102 DGSMGAHEKQKQIDAYNAPDSKYFAFLLSTRSGGVGINL-ATADTVIIMDPDFNPHQ--- 1157 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + ++R + G ++ V V+ L+ + + +E ++Q + K + +L+ + + Sbjct: 1158 --DIQALSRAHRIGQQKKVLVFQLMTRESAEEKIMQIGKKKMALDHVLIEKMDAD 1210 >gi|195111562|ref|XP_002000347.1| GI10182 [Drosophila mojavensis] gi|193916941|gb|EDW15808.1| GI10182 [Drosophila mojavensis] Length = 1389 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 18/136 (13%) Query: 74 AYHFNSDLARLQKAFPQGRTLDK---------DPCTIQEWNEG---KIPLLFAHPASCGH 121 Y F D+ + + G + +++N + L + G Sbjct: 1025 GYEFEGDVGNFKGCWTPGEDYFRLDGSCSVEQRESMCKKFNNASNLRARLFLISTRAGGL 1084 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V Sbjct: 1085 GINLVA-ANRVVIFDVSWNPSHDTQSIFRV-----YRFGQVKPCYIYRLIAMGTMEQKVY 1138 Query: 182 QRLRTKSTIQDLLLNA 197 +R K +++ Sbjct: 1139 ERQVAKQATAKRVIDE 1154 >gi|239610082|gb|EEQ87069.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3] Length = 931 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 20/163 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA-----------F 88 +E E KI+AL I+ +A +V + S L ++ Sbjct: 748 NEIDIDPETTSSKIEALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLARNGITFARID 807 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + +D N+ +L A C GLNL N ++ WW I Sbjct: 808 GRMSSAKRDAAMKALSNDPNCTVLLASLNVCSVGLNLVA-ANQVILADSWWAPA-----I 861 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 E V R + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 862 EDQAVDRVYRLGQKRPTTIWRLVMENSIEDRVLHKQKEKRTLM 904 >gi|190358532|ref|NP_001121901.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform a [Homo sapiens] gi|190358536|ref|NP_001121902.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform a [Homo sapiens] gi|119626456|gb|EAX06051.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, isoform CRA_c [Homo sapiens] gi|168278811|dbj|BAG11285.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [synthetic construct] Length = 1028 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 841 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 900 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 901 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 955 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 956 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1003 >gi|114595202|ref|XP_517348.2| PREDICTED: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 3 [Pan troglodytes] gi|114595204|ref|XP_001163670.1| PREDICTED: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 2 [Pan troglodytes] gi|10944338|gb|AAG16639.1| helicase SMARCAD1 [Homo sapiens] Length = 1026 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 839 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 898 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 899 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 953 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 954 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1001 >gi|302913263|ref|XP_003050881.1| SNF2 superfamily RAD26-like protein [Nectria haematococca mpVI 77-13-4] gi|256731819|gb|EEU45168.1| SNF2 superfamily RAD26-like protein [Nectria haematococca mpVI 77-13-4] Length = 1020 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 17/140 (12%) Query: 64 EKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP-LL 112 +N ++V H L LQ + ++ + +N + Sbjct: 561 WHSNGDKVLVFSHSVRLLRILQHLFTNTSYTVSYLDGSLSYEQRQEVVDTFNSDPTQFVF 620 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLN+ N +V W+ + R + G R V V+ LI+ Sbjct: 621 LISTKAGGVGLNITS-ANKVVIIDPHWNPS-----YDLQAQDRAYRIGQTRDVEVFRLIS 674 Query: 173 QNTIDELVLQRLRTKSTIQD 192 T++E+V R K + Sbjct: 675 LGTVEEIVYARQIYKQQQAN 694 >gi|190358534|ref|NP_064544.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform b [Homo sapiens] gi|306526240|sp|Q9H4L7|SMRCD_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1; AltName: Full=ATP-dependent helicase 1; Short=hHEL1 gi|119626455|gb|EAX06050.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, isoform CRA_b [Homo sapiens] Length = 1026 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 839 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 898 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 899 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 953 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 954 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1001 >gi|118496046|dbj|BAF37539.1| DNA repair and recombination protein RAD5B [Neurospora crassa] Length = 950 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 20/174 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA------- 87 + DEE+ E K +A+ +++ + II+ + S L +Q Sbjct: 762 HSATQDEEELESETKSSKTEAVLALVKGTLDKEGSKIIIFSQWTSFLTIIQHQLDEAGYT 821 Query: 88 ---FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + I+ + + +L A C GLNL + ++ WW Sbjct: 822 YTRIDGSMNAAQRDAAIRALDYDPNTRILLASLGVCSVGLNLVS-ADTVILADSWWAPA- 879 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 IE V R + G R V+ L+ N+I+E VL + K + Sbjct: 880 ----IEDQAVDRVHRLGQTRPTTVWRLVMDNSIEERVLDIQKEKRELVGKAFQE 929 >gi|291437491|ref|ZP_06576881.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291340386|gb|EFE67342.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 732 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 19/155 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPC 99 K+ L I+++ N +V HF L R+ + Sbjct: 539 KSAKLGRLREIVQEAGENGRKTVVFSHFRDVLGVVEEALAADTRVFGPLTGSVPAGRRQR 598 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ +L A + G GLNLQ +++V E V R + Sbjct: 599 LVDDFAGAPGPAVLLAQIQAAGVGLNLQA-ASVVVLCEPQIKPTL-----EHQAVARAHR 652 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 G R V V+ L+A +DE +++ L K+ + D Sbjct: 653 MGQVRPVRVHRLLATGGVDERLVRMLEDKTRLFDA 687 >gi|297734575|emb|CBI16626.3| unnamed protein product [Vitis vinifera] Length = 832 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 28/232 (12%), Positives = 76/232 (32%), Gaps = 41/232 (17%) Query: 2 KQYHK-FQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEV 51 K Y ++EL + + ++ + + + EE Sbjct: 302 KVYMSILRKELPKLLAFSSGPSGHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQ 361 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPC 99 K+ L+ +++K + +++ L LQ ++ Sbjct: 362 ASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQDFMELRKYSYERLDGSVRAEERFS 421 Query: 100 TIQEWNEGKI-------------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I+ ++ + + + G GLNL + ++F+ W+ + Sbjct: 422 AIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGVGLNLVA-ADTVIFYEQDWNPQ---- 476 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +++ + R + G V L+ T++E++++R K + ++ + Sbjct: 477 -VDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNVVGEV 527 >gi|239929154|ref|ZP_04686107.1| bifunctional protein [Streptomyces ghanaensis ATCC 14672] Length = 722 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 19/155 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPC 99 K+ L I+++ N +V HF L R+ + Sbjct: 529 KSAKLGRLREIVQEAGENGRKTVVFSHFRDVLGVVEEALAADTRVFGPLTGSVPAGRRQR 588 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ +L A + G GLNLQ +++V E V R + Sbjct: 589 LVDDFAGAPGPAVLLAQIQAAGVGLNLQA-ASVVVLCEPQIKPTL-----EHQAVARAHR 642 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 G R V V+ L+A +DE +++ L K+ + D Sbjct: 643 MGQVRPVRVHRLLATGGVDERLVRMLEDKTRLFDA 677 >gi|194208967|ref|XP_001497269.2| PREDICTED: similar to SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 2 [Equus caballus] Length = 1029 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 842 HINNFQLDMDLILDSGKFRVLGRILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 901 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 902 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 956 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 957 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1004 >gi|156101125|ref|XP_001616256.1| SNF2 family N-terminal domain containing protein [Plasmodium vivax SaI-1] gi|148805130|gb|EDL46529.1| SNF2 family N-terminal domain containing protein [Plasmodium vivax] Length = 2946 Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 8/129 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + I+E+N + + + G G+NL N ++ Sbjct: 1236 YCKYRCWKYMRLDGSTNKLIRELDIREFNLSDSIYFIYLISTRAGGLGINLTA-ANHVIM 1294 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ I+ + R + G KR V V+ L+ + T++E + R K + L+ Sbjct: 1295 YDEDWNP-----FIDLQAIDRAHRIGQKREVNVWKLMTEWTVEERMAFRREQKLKLDKLV 1349 Query: 195 LNALKKETI 203 + E + Sbjct: 1350 VQTQDDEDM 1358 >gi|317037064|ref|XP_001398334.2| hypothetical protein ANI_1_444154 [Aspergillus niger CBS 513.88] Length = 858 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 9/126 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + +++N+G + + G GLN+ +G N ++ F + Sbjct: 493 FGWKYCRLDGSTPMASRQAATKQFNQGSAEDVYLISTRAGGLGLNI-FGANRVIIFDFTF 551 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + E V R + G K+ VFVY IA T +E++ + K+ + +++ K Sbjct: 552 NP-----VWEEQAVGRAYRLGQKKPVFVYRFIAGGTFEEVMYNKAVFKTQLAFRVVD--K 604 Query: 200 KETIHV 205 K I + Sbjct: 605 KNPIRL 610 >gi|134083903|emb|CAK48807.1| unnamed protein product [Aspergillus niger] Length = 1758 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 9/126 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + +++N+G + + G GLN+ +G N ++ F + Sbjct: 1393 FGWKYCRLDGSTPMASRQAATKQFNQGSAEDVYLISTRAGGLGLNI-FGANRVIIFDFTF 1451 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + E V R + G K+ VFVY IA T +E++ + K+ + +++ K Sbjct: 1452 NP-----VWEEQAVGRAYRLGQKKPVFVYRFIAGGTFEEVMYNKAVFKTQLAFRVVD--K 1504 Query: 200 KETIHV 205 K I + Sbjct: 1505 KNPIRL 1510 >gi|301606634|ref|XP_002932929.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Xenopus (Silurana) tropicalis] Length = 2522 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 49/152 (32%), Gaps = 10/152 (6%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-- 110 ++ + + + F + + + I + + Sbjct: 647 STFLEEFGDLKTEEQVRKFYWLFDF--LWIYIYERIDGRVRGNLRQAAIDRFCKPDSDRF 704 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL + + F W+ + + R + G +AV VY L Sbjct: 705 VFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-----DLQAQARCHRIGQSKAVKVYRL 758 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 I +N+ + + + K + +L + ++ Sbjct: 759 ITRNSYEREMFDKASLKLGLDKAVLQDINRKG 790 >gi|326479941|gb|EGE03951.1| hypothetical protein TEQG_02985 [Trichophyton equinum CBS 127.97] Length = 561 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 56/159 (35%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 KI+AL I+ +A +V + S L ++ +D Sbjct: 388 SSKIQALIKILTAKGQAAGTKTVVFSQWTSFLDLIEPHLVIHNINFARIDGKMNSAKRDA 447 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + ++ A C GLNL N +V WW IE V R + Sbjct: 448 AMGKFSRDSECTVMLASLNVCSVGLNLVA-ANQVVLADSWWAPA-----IEDQAVDRVYR 501 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R ++ L+ +N+I++ VL + K + Sbjct: 502 LGQTRPTTIWRLVMENSIEDRVLDIQKEKRELMSTAFQE 540 >gi|330918828|ref|XP_003298357.1| hypothetical protein PTT_09071 [Pyrenophora teres f. teres 0-1] gi|330929981|ref|XP_003302841.1| hypothetical protein PTT_14820 [Pyrenophora teres f. teres 0-1] gi|330929988|ref|XP_003302844.1| hypothetical protein PTT_14823 [Pyrenophora teres f. teres 0-1] gi|311321519|gb|EFQ89060.1| hypothetical protein PTT_14823 [Pyrenophora teres f. teres 0-1] gi|311321523|gb|EFQ89063.1| hypothetical protein PTT_14820 [Pyrenophora teres f. teres 0-1] gi|311328454|gb|EFQ93547.1| hypothetical protein PTT_09071 [Pyrenophora teres f. teres 0-1] Length = 1129 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 19/154 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLF 113 + A +V F S L ++ A + + + + +L Sbjct: 974 EEPNAKTVVFSQFTSFLDLIEPALTRDHIPFLRFDGSISQKVRAQILTEFTSSPRPYVLL 1033 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL N + WW +E + R + G +R V V Q Sbjct: 1034 LSLRAGGVGLNLT-CANKVFMMDPWWSFA-----VEAQAIDRVHRMGQEREVKVVRFCVQ 1087 Query: 174 NTIDELVLQRLRTKSTIQDL--LLNALKKETIHV 205 +I+E +L+ K I +++ +K + Sbjct: 1088 GSIEEKMLRIQERKKFIASSLGIMSDEEKRVQRI 1121 >gi|289769357|ref|ZP_06528735.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289699556|gb|EFD66985.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 767 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 23/175 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK------- 86 A + + + K++ L I+++ N +V +F LA +++ Sbjct: 529 AGNFMAMRRAAYMSSGNSAKLERLREIVQEAGENGQKTVVFSNFKDVLAVVKEALAVETT 588 Query: 87 -------AFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLW 138 G + + ++ + P +L + G GLN+Q +++V Sbjct: 589 RVTPVFGPLTGGVPAQRRQEIVDDFAGVQGPAVLLGQIQAAGVGLNMQA-ASVVVICEPQ 647 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 IE V R + G R V V+ L+A +DE +++ L K+ + D Sbjct: 648 IKPT-----IEHQAVARAHRMGQVRPVRVHRLLATGGVDERMVKMLEAKTRLFDA 697 >gi|256785459|ref|ZP_05523890.1| bifunctional protein [Streptomyces lividans TK24] Length = 722 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 23/175 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK------- 86 A + + + K++ L I+++ N +V +F LA +++ Sbjct: 484 AGNFMAMRRAAYMSSGNSAKLERLREIVQEAGENGQKTVVFSNFKDVLAVVKEALAVETT 543 Query: 87 -------AFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLW 138 G + + ++ + P +L + G GLN+Q +++V Sbjct: 544 RVTPVFGPLTGGVPAQRRQEIVDDFAGVQGPAVLLGQIQAAGVGLNMQA-ASVVVICEPQ 602 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 IE V R + G R V V+ L+A +DE +++ L K+ + D Sbjct: 603 IKPT-----IEHQAVARAHRMGQVRPVRVHRLLATGGVDERMVKMLEAKTRLFDA 652 >gi|21223436|ref|NP_629215.1| bifunctional protein [Streptomyces coelicolor A3(2)] gi|13810424|emb|CAC37452.1| putative bifunctional protein [Streptomyces coelicolor A3(2)] Length = 800 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 23/175 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK------- 86 A + + + K++ L I+++ N +V +F LA +++ Sbjct: 562 AGNFMAMRRAAYMSSGNSAKLERLREIVQEAGENGQKTVVFSNFKDVLAVVKEALAVETT 621 Query: 87 -------AFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLW 138 G + + ++ + P +L + G GLN+Q +++V Sbjct: 622 RVTPVFGPLTGGVPAQRRQEIVDDFAGVQGPAVLLGQIQAAGVGLNMQA-ASVVVICEPQ 680 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 IE V R + G R V V+ L+A +DE +++ L K+ + D Sbjct: 681 IKPT-----IEHQAVARAHRMGQVRPVRVHRLLATGGVDERMVKMLEAKTRLFDA 730 >gi|260814660|ref|XP_002602032.1| hypothetical protein BRAFLDRAFT_82621 [Branchiostoma floridae] gi|229287337|gb|EEN58044.1| hypothetical protein BRAFLDRAFT_82621 [Branchiostoma floridae] Length = 2045 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 23/243 (9%), Positives = 68/243 (27%), Gaps = 71/243 (29%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---------H 52 K Y + G + + ++ + N + + Sbjct: 866 KNYKALTK-------GMKGNTSSFLNIMMELKKCCNHSFLVRPPEDPPPGQSLVTQLLRS 918 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 K+ L+ ++ + +++ L L + + + Sbjct: 919 SGKLFLLDKLLVRLRDTGHRVLIFSQMVRMLDILAEYLTMRHFP---------FQDFC-- 967 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR------- 163 + G G+NL + ++ F W+ + + +R + G ++ Sbjct: 968 -FLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DIQAQSRAHRIGQRKQVCTSTP 1020 Query: 164 ----------------------------AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y L+ + +++E +++R + K + L++ Sbjct: 1021 FNKEELSAILKFGAEELFKENEGEEEEMPVNIYRLVTKGSVEEDIIERAKKKMVLDHLVI 1080 Query: 196 NAL 198 + Sbjct: 1081 QRM 1083 >gi|195445442|ref|XP_002070326.1| GK12000 [Drosophila willistoni] gi|194166411|gb|EDW81312.1| GK12000 [Drosophila willistoni] Length = 1352 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 18/136 (13%) Query: 74 AYHFNSDLARLQKAFPQGRTLDK---------DPCTIQEWNEG---KIPLLFAHPASCGH 121 Y F D+ + + G + +++N K L + G Sbjct: 976 GYDFEGDVGNFKGCWTPGEDYFRLDGSCSVEQREAMCKKFNNAANLKARLFLISTRAGGL 1035 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V Sbjct: 1036 GINLVA-ANRVVIFDVSWNPSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVY 1089 Query: 182 QRLRTKSTIQDLLLNA 197 +R K +++ Sbjct: 1090 ERQVAKLATAKRVIDE 1105 >gi|47222591|emb|CAG02956.1| unnamed protein product [Tetraodon nigroviridis] Length = 1174 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 9/103 (8%) Query: 97 DPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 E+N + LL + G+NL + +V F W+ + V Sbjct: 989 RKKWADEFNNAANNRCKLLLISTKAGSLGINLVA-ASRVVIFDASWNPS-----YDVQSV 1042 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G R VFVY +AQ T++E + R TK ++ + +++ Sbjct: 1043 YRVYRFGQVRPVFVYRFLAQGTMEEKIYDRQVTKQSLSNRVVD 1085 >gi|115623606|ref|XP_786706.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115939608|ref|XP_001193343.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 1093 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 23/175 (13%) Query: 43 DEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQ----------KAF 88 +++ + K+ AL + IV F S L L+ Sbjct: 901 NDDTDREWHSSAKVDALMECLLTERAADKTTKSIVVSQFTSFLDLLKKPLTEKGFKFCRL 960 Query: 89 PQGRTLDKDPCTIQEW--NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I+E+ N+ P + + G GLNL + L W+ + Sbjct: 961 DGSMSRIARTAAIREFSSNDPDSPQIFLLSLKAGGVGLNLTA-ASRLYLLDPAWNPACEE 1019 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q +R + G + V + + +++++E +L+ TK + + + Sbjct: 1020 QCFDRC-----HRLGQTKDVTITKFLVRDSVEEAMLELQETKRQLMKNVFGGKNQ 1069 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 5/47 (10%), Positives = 13/47 (27%), Gaps = 6/47 (12%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFN----SASKTVKCLQLANGAVYY 42 K Y +++ + + N + ++ QL Sbjct: 754 KVYKTMEKDGRLAVSKYFQQGSVLNHYGDILAILMRLRQLCCHPALC 800 >gi|47209275|emb|CAF89705.1| unnamed protein product [Tetraodon nigroviridis] Length = 2968 Score = 77.9 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 8/107 (7%) Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I ++ + + G G+NL + + F W+ + + Sbjct: 1404 RQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-----DLQAQA 1457 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G +AV +Y LI +N+ + + + K + +L ++ Sbjct: 1458 RCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGR 1504 >gi|322701620|gb|EFY93369.1| SNF2 family helicase/ATPase [Metarhizium acridum CQMa 102] Length = 1677 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 6/148 (4%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + + D K +V++ + + + R G + K I+++N + Sbjct: 1172 QILDDAKRSKDKVLVFSHSIPTLNYLSKLFQEQKRCFSRLDGGTPIAKRQDEIKKFNANQ 1231 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L + G GLN+Q G N +V W+ Q + R + G + V VY Sbjct: 1232 TELYLISTRAGGVGLNIQ-GANKVVILDSKWNPVHEQ-----QAIGRSYRIGQSKPVSVY 1285 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y + T ++ + R K+ + +++ Sbjct: 1286 YFVTAGTFEQDLHGRAIFKTQLATRVVD 1313 >gi|303287156|ref|XP_003062867.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455503|gb|EEH52806.1| predicted protein [Micromonas pusilla CCMP1545] Length = 1542 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 71/246 (28%), Gaps = 58/246 (23%) Query: 2 KQYHKFQRELYCDLQGENIEA---FNSASKTVKCLQLANGAVYYDEEKH----------- 47 K Y + L+ +A N + ++ + D + Sbjct: 637 KCYRALFERNFSFLRQGCGDARALANFTNLMMEVRKCCQHPFLLDGVEEAFATQQAARLA 696 Query: 48 ---------WKEVHDEKIKALEVIIE--KANAAPIIVAYHFN------SDLARLQKAFPQ 90 K++ L+ ++ KA ++ D R +K + Sbjct: 697 KPRTTATAAQLVNCSGKLQLLDKLLPRLKAGGHRALIFSQMTRVLDVLEDYCRSRKHSYE 756 Query: 91 ----GRTLDKDPCTIQEWNEGKI-----------------PLLFAHPASCGHGLNLQYGG 129 G T I + +G L + G G+NL Sbjct: 757 RLDGGVTGRARQAAIDRFCDGGGGDGGGENAAGAGDDDGAFLFLLSTRAGGQGINLVA-A 815 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++ F W+ + + + R + G + V VY L+ + T + +L R K Sbjct: 816 DTVIVFDSDWNPQN-----DAQALARAHRIGQTKPVQVYRLVMRATYEREMLDRAAMKLG 870 Query: 190 IQDLLL 195 ++ + Sbjct: 871 LEQAIF 876 >gi|242208298|ref|XP_002470000.1| predicted protein [Postia placenta Mad-698-R] gi|220730900|gb|EED84750.1| predicted protein [Postia placenta Mad-698-R] Length = 955 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 3/102 (2%) Query: 101 IQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL-EEHQQMIERIGVTRQR 157 +Q +N I + + G GLNLQ +++ + + + R Sbjct: 676 VQMFNAPDSDIRVFILSTRAGGLGLNLQTADTVIMNNLIDDSFDSDWNPHADLQAQDRAH 735 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V + I + +++E + QR R K I D ++ A + Sbjct: 736 RIGQTKVVRILRFITEKSVEESMFQRARYKLDIDDKVIQAGR 777 >gi|295663903|ref|XP_002792504.1| DNA excision repair protein (Rad26L) [Paracoccidioides brasiliensis Pb01] gi|226279174|gb|EEH34740.1| DNA excision repair protein (Rad26L) [Paracoccidioides brasiliensis Pb01] Length = 1029 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 48/139 (34%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 N ++V H L LQ F T D + +N + + + Sbjct: 629 HGNGDKVLVFSHSVRLLKMLQMLFKHTSYNVSYLDGSMTYDNRAKAVDNFNADPREFVFL 688 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G R V V+ LI+ Sbjct: 689 ISTRAGGIGLNITS-ANKVVVVDPNWNPA-----FDLQAQDRAYRIGQSRDVEVFRLISA 742 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 743 GTIEEIVYARQIYKQQQAN 761 >gi|74001934|ref|XP_535658.2| PREDICTED: similar to SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 1 [Canis familiaris] gi|74001936|ref|XP_861412.1| PREDICTED: similar to SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 2 [Canis familiaris] Length = 1025 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 838 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 897 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 898 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 952 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 953 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1000 >gi|67523601|ref|XP_659860.1| hypothetical protein AN2256.2 [Aspergillus nidulans FGSC A4] gi|40744673|gb|EAA63829.1| hypothetical protein AN2256.2 [Aspergillus nidulans FGSC A4] gi|259487649|tpe|CBF86480.1| TPA: SNF2 family helicase, putative (AFU_orthologue; AFUA_5G06590) [Aspergillus nidulans FGSC A4] Length = 972 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 20/154 (12%) Query: 52 HDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKD 97 KI+AL I+ A ++ + S L ++ ++ +D Sbjct: 798 PSSKIEALIKILTAHGQVEATKTVIFSQWTSFLTLVEPHLQNAGIQFARIDGKMTSIARD 857 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + K +L A + C GLNL N + WW IE V R Sbjct: 858 RSMRRFSTDPKCTVLLASLSVCSVGLNLVA-ANQAILADSWWAPA-----IEDQAVDRVY 911 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G R V+ L+ +++I++ VL K + Sbjct: 912 RLGQTRETTVWRLVMEDSIEDRVLAIQEQKRKLM 945 >gi|321455028|gb|EFX66174.1| hypothetical protein DAPPUDRAFT_332470 [Daphnia pulex] Length = 358 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 6/94 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 L + G G+NL N ++ F W+ + I + G + Sbjct: 260 AHIPRLFLISTKAGGVGINLVA-ANRVILFDTSWNPSQDVPSI-----FCVYRLGQTKPC 313 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 FVY IAQ TI+E + R TK ++ +++ K Sbjct: 314 FVYRFIAQGTIEEKIYDRQVTKQSLSCRVIDEHK 347 >gi|254577539|ref|XP_002494756.1| ZYRO0A08932p [Zygosaccharomyces rouxii] gi|238937645|emb|CAR25823.1| ZYRO0A08932p [Zygosaccharomyces rouxii] Length = 1188 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 82/231 (35%), Gaps = 48/231 (20%) Query: 1 MKQYHKFQRELYCDLQ----GENIEAFNSASKTVK---------CLQLANGAVYYDEEKH 47 +K+Y +FQ++ +L+ E + + +K ++A Sbjct: 962 LKEYLEFQKQKELELKCPNCREPVNKNYFFTLMLKDGESPQVVPLREVA----------- 1010 Query: 48 WKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ--------------KAFPQGRT 93 + +K ++ E + I+V F+S L L+ F Sbjct: 1011 KSAKIEALLKHCSILQETSPGEQIVVFSQFSSFLDILETELANTFLGNGVKVYKFDGRLN 1070 Query: 94 LDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 L + ++ ++ +L + G GLNL + WW Q I+R Sbjct: 1071 LKERAAVLENFSTKDFDNQKVLLMSLKTGGVGLNLT-CASYAFMMDPWWSPSMEDQAIDR 1129 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 I + G V V I +N+I+E +L+ K TI + ++A + E Sbjct: 1130 I-----HRIGQINQVKVTRFIVENSIEEKMLKIQERKRTIGEA-MDADEDE 1174 >gi|154302623|ref|XP_001551721.1| hypothetical protein BC1G_09888 [Botryotinia fuckeliana B05.10] gi|150855377|gb|EDN30569.1| hypothetical protein BC1G_09888 [Botryotinia fuckeliana B05.10] Length = 1025 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 17/166 (10%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDK 96 + + K+ + +++ H L LQ F + Sbjct: 609 NPEFCGKWKVLRKLLKHWHEEGDKVLIFSHSVKLLRMLQHLFQSTSYNVSFLSGEMKYED 668 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 T+ ++N + + + G GLN+ N +V F W+ + R Sbjct: 669 RQDTVDDFNSDPNQFIFLISTKAGGVGLNITS-ANKVVIFDPNWNPS-----YDLQAQDR 722 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V + L++ TI+E+V R K ++ NA K+ Sbjct: 723 AYRIGQHRDVDSFRLVSAGTIEEVVYARQIYKQQQANIGYNASKER 768 >gi|325190696|emb|CCA25192.1| unnamed protein product putative [Albugo laibachii Nc14] Length = 835 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 50/124 (40%), Gaps = 8/124 (6%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 D + I+ + + ++ +L + G+NL N LV F Sbjct: 649 VDDTNDWFLQIDGSTVGTRRSEYIERFTSSDNRVKVLLVSTRAGAEGINLHA-ANRLVLF 707 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + W+ + + R + G + V VY L++ T++ ++ ++ R K+++ L+ Sbjct: 708 DVSWNPS-----YDHQSMCRSHRLGQSKTVHVYRLVSTGTMERMIYEQQRKKTSLSMALV 762 Query: 196 NALK 199 + K Sbjct: 763 DRSK 766 >gi|296809169|ref|XP_002844923.1| DNA repair protein RAD5 [Arthroderma otae CBS 113480] gi|238844406|gb|EEQ34068.1| DNA repair protein RAD5 [Arthroderma otae CBS 113480] Length = 919 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 61/169 (36%), Gaps = 20/169 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKA-----------F 88 +E + E KI+AL I+ +V + S L ++ Sbjct: 736 NEVEVDSESTSSKIQALIKILMAKGQVLGTKTVVFSQWTSFLDLIEPQLSLNNINFARID 795 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + +D + ++ + ++ A C GLNL N ++ WW I Sbjct: 796 GKMNSAKRDAAMRKLTHDPECTVMLASLNVCSVGLNLVA-ANQVILADSWWAPA-----I 849 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E V R + G R ++ L+ +++I++ VL + K + Sbjct: 850 EDQAVDRVYRLGQTRPTTIWRLVMEDSIEDRVLDIQKEKRELMTTAFQE 898 >gi|302309993|ref|XP_451940.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|199424832|emb|CAH02333.2| KLLA0B09240p [Kluyveromyces lactis] Length = 798 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 50/147 (34%), Gaps = 17/147 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPAS 118 IV F S L ++ + T + TI+ + + + Sbjct: 647 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMTPTQRDQTIKYFMENIHCEVFLVSLKA 706 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 707 GGVALNL-CEASQVFILDPWWNPSVEWQSGDRV-----HRIGQFRPVKITRFCIEDSIES 760 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 +++ K+++ +N + + Sbjct: 761 RIIELQEKKASMIHATINQDEAAINRL 787 Score = 34.3 bits (77), Expect = 8.7, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 57/196 (29%), Gaps = 32/196 (16%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y +R+ ++ + N + + Q+A+ K K +D + Sbjct: 487 LYSDIKRKYNSYVEEGVVLNNYANIFTLITRMRQMADHPDLV--LKRLKGNNDNNPGVII 544 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 + A I + + + D+ L G Sbjct: 545 CQLCDDEAEEPIESKCHHRFCRLCINEYIDSFMADEKK-------------LTCPVCHIG 591 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 ++LQ + +L + Q ++ R+ + + ++ K V E + Sbjct: 592 LSIDLQQQA-----LEVDEELFKKQSIVSRLKMGGKWRSSTKIEALV----------EEL 636 Query: 181 LQRLRTKSTIQDLLLN 196 K TI+ ++ + Sbjct: 637 YNLRSDKRTIKSIVFS 652 >gi|241959098|ref|XP_002422268.1| probable ATP-dependent helicase, putative [Candida dubliniensis CD36] gi|223645613|emb|CAX40272.1| probable ATP-dependent helicase, putative [Candida dubliniensis CD36] Length = 1096 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 59/163 (36%), Gaps = 20/163 (12%) Query: 46 KHWKEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 K + K+ L I+++ +++ F L L++ Sbjct: 931 GDEKYLDSGKVIELGKILQQIINNKGEKVLIFSLFTQVLDILERVLSIFNYKFARLDGNT 990 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + I +N + I + + G G+NL N ++ F ++ ++ Sbjct: 991 PVQERQDLIDLFNHDDNIHIFLISTKAGGVGINLVA-ANHVIMFDQSFNP-----HEDKQ 1044 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + V VY LI+ TI++ + R K + + + Sbjct: 1045 AEDRAHRVGQTKEVKVYRLISDETIEKNIFSVARNKLELDEKI 1087 >gi|118393979|ref|XP_001029383.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89283583|gb|EAR81720.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1811 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 66/176 (37%), Gaps = 21/176 (11%) Query: 37 NGAVYYDEEKHWKEV--HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK------ 86 K + K+ + +++K +++ + L + Sbjct: 1274 CHIRRTLCFPSKKLLMYDCGKLNTMIQLLKKLKQRGDKVLIFTQMSRMLDIFENVLNLFN 1333 Query: 87 ----AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 ++ ++ +N + +I + S G GLNL G N++VF+ W+ Sbjct: 1334 FTYVRLDGSTKIENRQKVVERFNGDSRIFCFISSTRSGGIGLNLT-GANVVVFYDTDWNP 1392 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++R R + G R V +Y LI++ TI+E +L + K + + ++ Sbjct: 1393 A-----MDRQAQDRCHRIGQTRNVSIYRLISEYTIEENILLKSIQKRKLDEYIMEE 1443 >gi|68064412|ref|XP_674191.1| DNA helicase [Plasmodium berghei strain ANKA] gi|56492586|emb|CAI00653.1| DNA helicase, putative [Plasmodium berghei] Length = 467 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 47/236 (19%) Query: 3 QYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYY---DEEKHWKEVHDEKIKA 58 Y + + + + + + + + ++ ++ N + + + K + Sbjct: 145 LYKQIENKSFKQVNSDGTLNTKSFQNTIMQLRKVVNHPFLFTYNYDINDFIIKSSGKFEV 204 Query: 59 LEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 L+ +I K I++ +L I +NE Sbjct: 205 LDRMIPKLLKFKHKILLFCQMTKLMDILSDYFELRGYKYHRLDGSVSLSNRREIIDNFNE 264 Query: 107 GKI-------------------------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + S GLNLQ + ++ F ++ Sbjct: 265 SMFVNNSEEIFKNKDSDLLTQESKLDEPMIFILSTRSGSLGLNLQA-ADTVIIFDSDFNP 323 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G K V V+ I ++++ELV Q+ + K I D ++ A Sbjct: 324 HQ-----DIQAMCRCHRIGQKNIVKVFRFITISSVEELVFQKAKDKLNINDKVIQA 374 >gi|82595847|ref|XP_726017.1| nucleotide excision repair protein [Plasmodium yoelii yoelii str. 17XNL] gi|23481248|gb|EAA17582.1| similar nucleotide excision repair proteins-related [Plasmodium yoelii yoelii] Length = 818 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 17/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHP 116 ++ + S L ++ + ++ N+ ++ +L Sbjct: 665 DDKCLIFSQYCSMLDLIEYHLKKNNIICSKLLGYMSMVSRNNILYNFNNDKQLRVLLISL 724 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNLQ N + WW+ + R + G + V+ I +NT+ Sbjct: 725 KAGGEGLNLQ-VANRIFIVDPWWNPAAEL-----QAIQRAHRIGQTKTVYAIRFIIENTV 778 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E ++Q K + D + Sbjct: 779 EEKIIQLQNKKQLVFDCTIG 798 >gi|154309786|ref|XP_001554226.1| hypothetical protein BC1G_07363 [Botryotinia fuckeliana B05.10] gi|150851824|gb|EDN27017.1| hypothetical protein BC1G_07363 [Botryotinia fuckeliana B05.10] Length = 2080 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 6/120 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 D R ++K ++++N + L + G GLNL YG N +V F Sbjct: 1497 MCRDQGRKYARLDGKTAMNKRQALVKDFNSNDLELYLISTTAGGLGLNL-YGANRVVIFD 1555 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ + E + R + G K+ VFVY L+A T + + + K+ + +++ Sbjct: 1556 FKYNP-----INEEQAIGRAYRIGQKKHVFVYRLMAAGTFEGSIQNKAVFKTQLASRVVD 1610 >gi|320588259|gb|EFX00734.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 1741 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 76/203 (37%), Gaps = 24/203 (11%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + A + K L + + H K+ L I+++ Sbjct: 1189 QRERDAHHPSSASPYSATLPLAVVQKLLSI------GQKRNIDDLHHSSKVMVLMGILDE 1242 Query: 66 --ANAAPIIVAYH------FNSDLARLQKAFP---QGRTLDK-DPCTIQEWNEGKIPLLF 113 +++ + D+ + +K G T+ + ++ +N G+ + Sbjct: 1243 AREAGDKVLIFSQSKLVLDYLEDVFQRKKRRYSRLDGDTVVRWRQGMVKSFNAGRDEIYL 1302 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ G N +V F W+ Q + R + G + VFVY+LI Sbjct: 1303 ISTTAGGVGLNIH-GANRVVIFDFKWNPMHEQ-----QAIGRAYRIGQTKPVFVYWLITG 1356 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 T + ++ + K+ + +++ Sbjct: 1357 GTFETVLHDQAVFKTQLASRVVD 1379 >gi|167518399|ref|XP_001743540.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778639|gb|EDQ92254.1| predicted protein [Monosiga brevicollis MX1] Length = 546 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 70/189 (37%), Gaps = 22/189 (11%) Query: 32 CLQLANG--AVYYDEEKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKA 87 ++L N + K+K LE ++ + A +++ F + L L+ Sbjct: 348 LMKLCNKSRPLQKFRLGDEVVDEAGKLKVLEHLLAQKQADEARVLIFSQFTTMLDILEDF 407 Query: 88 FPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + + I ++N + +I + + G G+NL N +V Sbjct: 408 LTRRGYVFIRLDGSTPVSERQDLIDQFNEDEEIFVFLLSTRAGGLGINLTA-ANTVVLHD 466 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++ ++ R + G V + LIA T++ + + K ++ + Sbjct: 467 IDFNP-----YNDKQAEDRCHRVGQTDNVEIVRLIADETVEVDMQAKAEAKLQLERD-MT 520 Query: 197 ALKKETIHV 205 LKK+ H+ Sbjct: 521 GLKKDDAHI 529 >gi|13543768|gb|AAH06035.1| Chd4 protein [Mus musculus] Length = 829 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 8/107 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T + I +N + G G+NL + ++ + W+ Sbjct: 6 GITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HN 59 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +R + G + V +Y + + +++E + Q + K + L++ Sbjct: 60 DIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVV 106 >gi|30387275|ref|NP_848354.1| global transactivator [Choristoneura fumiferana MNPV] gi|4097928|gb|AAD10317.1| global transactivator [Choristoneura fumiferana MNPV] Length = 497 Score = 77.9 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 70/225 (31%), Gaps = 37/225 (16%) Query: 3 QYHKFQRELYCDLQG------ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------ 50 Y + E + + + Q+ +KE Sbjct: 264 VYDSLKNESQRAYDDAVAGGDKLRSMQDVLWLLCRLRQMCCHPALTKCSAMFKEHARIFE 323 Query: 51 --VHDEKIKALEVIIE---KANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLD 95 K + + +++ +++ + L + ++ Sbjct: 324 PAYESSKCRRVLELVQGVLDTMDDKVVLVSQWVEFLQLVAGLLRQRGVPVLLYTGTLRVE 383 Query: 96 KDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N + + +L G GLNL GGN ++ W+ + IE Sbjct: 384 ERTAVENQFNAADSRYRVLLMSIKCGGVGLNLT-GGNHIIMLEPHWNPQ-----IELQAQ 437 Query: 154 TRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ FVY ++ +N+I+ + R K T + + + Sbjct: 438 DRIHRMGQKKRTFVYKMLVDEENSIERYMKARQDKKLTFVNKVFD 482 >gi|322824424|gb|EFZ29833.1| DNA repair protein, putative [Trypanosoma cruzi] Length = 748 Score = 77.9 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDPCTIQEWN 105 + +++ + ++ +I+ HF S L TL I+ + Sbjct: 560 LDSIDTMKKEYPDDKMIIFSHFTSFMDVISVALDKLEISHLRLDGTMTLTNRNTVIRRFQ 619 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ A + G GLNL N ++ WW+ IE V R + G K+ Sbjct: 620 ASDDVRVILASKTATGVGLNLTA-ANHVLVVDPWWNPA-----IEEQAVHRCYRIGQKKH 673 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V +I ++TI++ + + K D +L A Sbjct: 674 VHVTRIIIEDTIEQYCHEICQRKKEFGDAILRA 706 Score = 35.1 bits (79), Expect = 6.2, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 11/42 (26%), Gaps = 2/42 (4%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVY 41 KQY+ + AF+ + + Q Sbjct: 423 KQYNSILARSRTALATSERKEGAFHIFAMMTRLRQACCHPWI 464 >gi|71653924|ref|XP_815591.1| DNA repair protein [Trypanosoma cruzi strain CL Brener] gi|70880657|gb|EAN93740.1| DNA repair protein, putative [Trypanosoma cruzi] Length = 748 Score = 77.9 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDPCTIQEWN 105 + +++ + ++ +I+ HF S L TL I+ + Sbjct: 560 LDSIDTMKKEYPDDKMIIFSHFTSFMDVISVALDKLEISHLRLDGTMTLTNRNTVIRRFQ 619 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ A + G GLNL N ++ WW+ IE V R + G K+ Sbjct: 620 ASDDVRVILASKTATGVGLNLTA-ANHVLVVDPWWNPA-----IEEQAVHRCYRIGQKKH 673 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V +I ++TI++ + + K D +L A Sbjct: 674 VHVTRIIIEDTIEQYCHEICQRKKEFGDAILRA 706 Score = 35.1 bits (79), Expect = 6.2, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 11/42 (26%), Gaps = 2/42 (4%) Query: 2 KQYHKF--QRELYCDLQGENIEAFNSASKTVKCLQLANGAVY 41 KQY+ + AF+ + + Q Sbjct: 423 KQYNSILARSRTALATSERKEGAFHIFAMMTRLRQACCHPWI 464 >gi|170058721|ref|XP_001865045.1| transcriptional regulator ATRX [Culex quinquefasciatus] gi|167877721|gb|EDS41104.1| transcriptional regulator ATRX [Culex quinquefasciatus] Length = 1268 Score = 77.9 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 57/180 (31%), Gaps = 27/180 (15%) Query: 32 CLQLANGAVYYDEEKHWKEVHD------EKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 Q E + ++ I P Y + S + Sbjct: 121 LKQ--CH-----ERGEKCLIFSAFVAVLNVVEHFMAKIHNQQNDPAADVYGYGSFRGPWE 173 Query: 86 KAFPQGRTLDK-----DPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 R K I +N+ + + G G+NL G N ++ Sbjct: 174 PGKDYYRLDGKTQKNIRHKMITSFNDPSNKRTKCFLISAKAGGQGINL-IGANRVIILDT 232 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ QQ I RI + G KR +VY L+A T++E V R TK + +++ Sbjct: 233 SWNPSNDQQNIFRI-----FRLGQKRKCYVYRLLAMGTMEEKVYSRSVTKQAMSFRVVDE 287 >gi|317126457|ref|YP_004100569.1| helicase [Intrasporangium calvum DSM 43043] gi|315590545|gb|ADU49842.1| helicase domain protein [Intrasporangium calvum DSM 43043] Length = 726 Score = 77.9 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 60/198 (30%), Gaps = 24/198 (12%) Query: 7 FQRELYCDLQ--GENIEAFNSASKTVKCLQ----LANGAVYYDEEKHWKEVHDEKIKALE 60 +R +L+ N + + Q LA K V K + Sbjct: 521 LRRVAMAELKAPSGEGTGENVFTLVRRIGQAKASLAADYAAQLSHSVGKVVFFAKHIDVM 580 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 A +D + +T + + + + ++ + + Sbjct: 581 D-----------KAERILADAGLRTVSIRGDQTAKQRQEAVDAFQKDPEVSVAVCSLLAA 629 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL N+++ W E+ + R + G V + ++A T+D Sbjct: 630 GVGVNLHASSNVVLSELSWTAAEQQ------QAIDRVHRIGQDEPVTAWRILAAGTVDSR 683 Query: 180 VLQRLRTKSTIQDLLLNA 197 + + + K + L+ Sbjct: 684 IAELIDAKQGLAARALDG 701 >gi|195504329|ref|XP_002099032.1| GE10693 [Drosophila yakuba] gi|194185133|gb|EDW98744.1| GE10693 [Drosophila yakuba] Length = 1312 Score = 77.9 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++++ +++N + L + G G+NL N +V F + W+ Sbjct: 963 DYFRLDGSCSVEQREAMCKQFNNVTNLRARLFLISTRAGGLGINLVA-ANRVVIFDVSWN 1021 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I R+ + G + ++Y LIA T+++ V +R K +++ Sbjct: 1022 PSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDE 1073 >gi|301758964|ref|XP_002915331.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Ailuropoda melanoleuca] Length = 1027 Score = 77.5 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 840 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 899 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 900 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 954 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 955 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1002 >gi|242077806|ref|XP_002448839.1| hypothetical protein SORBIDRAFT_06g034160 [Sorghum bicolor] gi|241940022|gb|EES13167.1| hypothetical protein SORBIDRAFT_06g034160 [Sorghum bicolor] Length = 1042 Score = 77.5 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 27/235 (11%), Positives = 65/235 (27%), Gaps = 58/235 (24%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY------------YDEEKHWK 49 K Y F L + + ++ + + DE + + Sbjct: 605 KLYTAFLNSELVHL--ALQPKASPLAAITILKKICDHPLLLTKKGAEGVLEGMDEMLNDQ 662 Query: 50 EVH-------------------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 ++ K+ + ++ +++ L Sbjct: 663 DIGMVEKMAMNLADMAHDDDALQVGQDVSCKLSFIMSLLRNLVGEGHHVLIFSQTRKMLN 722 Query: 83 RLQK----------AFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNI 131 +Q+ + + ++++ EG+ P+ G GL L Sbjct: 723 LIQEAIILEGYEFLRIDGTTKVSERERIVKDFQEGRGAPIFLLTTQVGGLGLTLTKAA-R 781 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++ W+ Q ++R + G + V VY L+ TI+E + + Sbjct: 782 VIVVDPAWNPSTDNQSVDR-----AYRIGQTKNVIVYRLMTSATIEEKIYKLQVQ 831 >gi|45935136|gb|AAS79594.1| putative DNA repair protein [Ipomoea trifida] gi|117166029|dbj|BAF36331.1| hypothetical protein [Ipomoea trifida] Length = 1040 Score = 77.5 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 53/161 (32%), Gaps = 18/161 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEW- 104 + + N + IV + + L LQ A + + I+ + Sbjct: 879 LLHELEQLRAVN-SKSIVFSQWTAFLDLLQIALARNDISFLRLDGTLNQQQREKVIKRFS 937 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E + +L + G G+NL + WW+ +E V R + G + Sbjct: 938 EEDSVLVLLMSLKAGGVGINLTA-ASNAFVLDPWWNPA-----VEEQAVMRVHRIGQTKR 991 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V + I + T++E + K + L + T + Sbjct: 992 VAIKRFIVKGTVEERMEAVQARKQRMISGALTDQEVRTARI 1032 Score = 37.8 bits (86), Expect = 0.87, Method: Composition-based stats. Identities = 14/156 (8%), Positives = 27/156 (17%), Gaps = 25/156 (16%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + + ++ Q + +E D Sbjct: 706 YEALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVLSRGDTQEFSDLNKL 765 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 A + + D L K G+ P+ Sbjct: 766 AKRFLKGGQK-----TGENHVEDAPTRAYIQEVVEELRKGEQ-------GECPICL---- 809 Query: 118 SCGHGLNLQYGGNIL---VFFSLWWDLEEHQQMIER 150 L + L + W + R Sbjct: 810 EACEDAVLTPCAHRLCRECLLASWRSPASGFCPVCR 845 >gi|302501310|ref|XP_003012647.1| hypothetical protein ARB_00897 [Arthroderma benhamiae CBS 112371] gi|291176207|gb|EFE32007.1| hypothetical protein ARB_00897 [Arthroderma benhamiae CBS 112371] Length = 828 Score = 77.5 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 49/147 (33%), Gaps = 17/147 (11%) Query: 69 APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 IV F S L ++ + + + +I + + Sbjct: 674 NKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQRQRSIDYFMKNVDTEVFLVSLK 733 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G +R + L +++++ Sbjct: 734 AGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVE 787 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ K+ + + +N + E + Sbjct: 788 SRMVLLQEKKANMINGTINKDQSEALE 814 >gi|221062029|ref|XP_002262584.1| DNA repair protein rhp16 [Plasmodium knowlesi strain H] gi|193811734|emb|CAQ42462.1| DNA repair protein rhp16, putative [Plasmodium knowlesi strain H] Length = 1527 Score = 77.5 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 50/146 (34%), Gaps = 17/146 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKIPL 111 + ++ + S L ++ + + + +N + + + Sbjct: 1369 VIHTTDDKCLIFSQYCSMLDLIEYHLKKHNIICSKLLGYMPMVSRNNILYNFNEDKHLRV 1428 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G GLNLQ N + WW+ + R + G + V+ I Sbjct: 1429 LLISLKAGGEGLNLQ-VANRIFIVDPWWNPAAEL-----QAIQRAHRIGQTKTVYATRFI 1482 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 +NT++E ++Q K + D + Sbjct: 1483 IENTVEEKIVQLQNKKQLVFDCTIGD 1508 >gi|156052062|ref|XP_001591992.1| hypothetical protein SS1G_07439 [Sclerotinia sclerotiorum 1980] gi|154705216|gb|EDO04955.1| hypothetical protein SS1G_07439 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1863 Score = 77.5 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 18/156 (11%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYH------FNSDLA----RLQKAFPQGRTLDKDPCT 100 K++ L I++ + ++V F D+ R + K Sbjct: 1291 SNKVRILCQILDASKAVGDKVLVFSQTLVTLDFLEDMCKEQGRKYARLDGKTAMGKRQAI 1350 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++++N + L + G GLNL YG N +V F ++ + E + R + G Sbjct: 1351 VKDFNSNNLELYLISTNAGGLGLNL-YGANRVVIFDFRYNP-----INEEQAIGRAYRIG 1404 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K+ VFVY L+A T + + + K+ + +++ Sbjct: 1405 QKKHVFVYRLMAAGTFENSIQNKAVFKTQLASRVVD 1440 >gi|327304687|ref|XP_003237035.1| DNA repair protein RAD16 [Trichophyton rubrum CBS 118892] gi|326460033|gb|EGD85486.1| DNA repair protein RAD16 [Trichophyton rubrum CBS 118892] Length = 935 Score = 77.5 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 49/147 (33%), Gaps = 17/147 (11%) Query: 69 APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 IV F S L ++ + + + +I + + Sbjct: 781 NKSIVFSQFTSMLQLVEWRLHRAGISTVMLDGSMSPVQRQRSIDYFMKNVDTEVFLVSLK 840 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G LNL + + WW+ Q +R + G +R + L +++++ Sbjct: 841 AGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITRLCIEDSVE 894 Query: 178 ELVLQRLRTKSTIQDLLLNALKKETIH 204 ++ K+ + + +N + E + Sbjct: 895 SRMVLLQEKKANMINGTINKDQSEALE 921 >gi|307186121|gb|EFN71846.1| Transcription termination factor 2 [Camponotus floridanus] Length = 830 Score = 77.5 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 8/148 (5%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPL 111 +K + +I+ + A ++A H +S F + I +N + Sbjct: 671 QKSEDKLIIVSQWTALLNVIASHLSSIKGATFSKFTGNVAIKDRQSIIDSFNSRNSDPRI 730 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G GLNL G N L+ F + W+ + Q +RI + G K+ V VY I Sbjct: 731 LLLSLTAGGVGLNL-VGANHLLLFDIHWNPQLETQAQDRI-----YRFGQKKNVHVYKFI 784 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALK 199 NTI+E + K I +L+ K Sbjct: 785 CLNTIEERIKGLQDRKLEIASNVLSGDK 812 >gi|21392184|gb|AAM48446.1| RE70645p [Drosophila melanogaster] gi|54650558|gb|AAV36858.1| RE74565p [Drosophila melanogaster] Length = 835 Score = 77.5 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 22/164 (13%) Query: 52 HDEKIKALEVIIE----KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKD 97 KI + I++ K++ IV + S L L+ + Sbjct: 662 PSSKINMVIQILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNR 721 Query: 98 PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + E+N+ + +L + G GLNL G N L+ L W + E R Sbjct: 722 QDIVNEFNDRNNQKRVLLLSLTAGGVGLNL-IGANHLLLLDLHWSPQL-----EAQAQDR 775 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K+ V +Y + +T+++ + K + D +L K Sbjct: 776 IYRVGQKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGVLTGAK 819 Score = 41.7 bits (96), Expect = 0.061, Method: Composition-based stats. Identities = 7/71 (9%), Positives = 21/71 (29%), Gaps = 6/71 (8%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-----VYYDEEKHWKEVHDEKIKA 58 Y ++ + +++ + ++ Q+ + EE H Sbjct: 541 YKMHEKFARMAGSKKEVKSHDILVLLLRLRQICCHPGLIDAMLDGEESQTMGDHSSDSDT 600 Query: 59 LE-VIIEKANA 68 E ++ + N Sbjct: 601 PEIDLLAQLNK 611 >gi|242045780|ref|XP_002460761.1| hypothetical protein SORBIDRAFT_02g034440 [Sorghum bicolor] gi|241924138|gb|EER97282.1| hypothetical protein SORBIDRAFT_02g034440 [Sorghum bicolor] Length = 857 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 53/176 (30%), Gaps = 21/176 (11%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQKAFPQ-- 90 + KI AL +IE +A IV F S L +Q + + Sbjct: 669 CSGILSRLPSLVDFKTSTKIDALREEIRNMIEHDGSAKGIVFSQFTSFLDLIQFSLEKSG 728 Query: 91 ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 +K + + + G LNL + + WW+ Sbjct: 729 IKCVQLNGAMNITEKGRAIDTFTRDPDCRIFLMSLKAGGVALNLT-VASHVFLMDPWWNP 787 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E R + G + + + +T++E +LQ K + + + Sbjct: 788 A-----VESQAQDRIHRIGQFKPIKSTRFVIGDTVEERILQLQEKKHLVFEGTVGD 838 Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats. Identities = 5/78 (6%), Positives = 17/78 (21%), Gaps = 6/78 (7%) Query: 1 MKQYHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 M+ Y + + + + Q + K + Sbjct: 533 MEFYEALYTQSVTQFDAYVVAGTLMNNFAHIFDLLTRLRQAVDHPYLVAYSKTAEHPEGM 592 Query: 55 KIKALEVIIEKANAAPII 72 K + + + + + Sbjct: 593 KNEGNDTMESQCGICHNL 610 >gi|221128249|ref|XP_002153956.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 541 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 32 CLQLANGAVYYDEEKHWKE--VHDEKIKALEVIIEK--ANAAPIIVAYHFN--------- 78 +L + + K + + KIK L+ ++ + +++ F Sbjct: 365 LHKLCSTQSILKKYKLCDDDILDSGKIKQLDKLLPELKEKNDRVLLFSQFVIVLDILEEY 424 Query: 79 -SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++ I ++N +I + + G G+NL N +V Sbjct: 425 LKIRKIKYLRLDGSTKGNERQELIDKFNHNEEIFIFLLSTRAGGLGINLTT-ANTVVLHD 483 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + ++ ++ R + G R V VY I ++T++E +L K ++ Sbjct: 484 IDFNP-----YNDKQAEDRCHRLGQTRQVTVYKFIGKDTVEENILTCGERKLQLEKS 535 >gi|171688590|ref|XP_001909235.1| hypothetical protein [Podospora anserina S mat+] gi|170944257|emb|CAP70367.1| unnamed protein product [Podospora anserina S mat+] Length = 1092 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 17/152 (11%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLL 112 +V + S L ++ A ++ + ++ Sbjct: 929 PDEPPYKSVVFSGWTSHLDLIEIALDDAGITHSRLDGKMTRNARNQAMEAFRDDPNVQVI 988 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL GN + ++ Q ++R+ + G KR V I Sbjct: 989 LVSIMAGGMGLNLTA-GNSVFVMEPQFNPAAEAQAVDRV-----HRLGQKRPVRTVRYIM 1042 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + +E ++ K + L ++ + E + Sbjct: 1043 SGSFEEKMIALQEKKKQLASLSMDRAEAEGVR 1074 >gi|294891643|ref|XP_002773666.1| DNA helicase, putative [Perkinsus marinus ATCC 50983] gi|239878870|gb|EER05482.1| DNA helicase, putative [Perkinsus marinus ATCC 50983] Length = 741 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 72/221 (32%), Gaps = 33/221 (14%) Query: 2 KQYHKFQRELYCDLQGENI-------EAFNSASKT-VKCLQLANGAVYYDEEKHWKEVHD 53 + Y + + +G + E + ++ ++ N + + Sbjct: 421 RMYTEIESRGLAHARGGSRKEDESPPEYISVGQNLQMQLRKVCNHPYLFCHDSDLPIDES 480 Query: 54 -----EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------K 96 K+ AL+ I+ K A +++ L L+ Sbjct: 481 LIRICGKMMALDGILPKLRATGHRVLIFSQMTKLLNILELYLTFRNFRYLRLDGSTGADD 540 Query: 97 DPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I+ +N + G G+NLQ + ++ F W+ + + + Sbjct: 541 RERRIELFNSSNSNYFAFILSTRAGGLGINLQT-ADTVIIFDSDWNPQN-----DEQAQS 594 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G K V + LI N+++E +LQ+ K L++ Sbjct: 595 RAHRLGQKSEVRTFRLITLNSVEEGMLQKAGEKMDQDALVI 635 >gi|260949835|ref|XP_002619214.1| hypothetical protein CLUG_00373 [Clavispora lusitaniae ATCC 42720] gi|238846786|gb|EEQ36250.1| hypothetical protein CLUG_00373 [Clavispora lusitaniae ATCC 42720] Length = 1162 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 22/203 (10%), Positives = 66/203 (32%), Gaps = 32/203 (15%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-------------VIIEKAN 67 ++ ++ + Y E D + L + Sbjct: 869 SRMRLLNRVMQLRNVCGSHYVYYEPLADDNEDDAYLAHLIFRNSGKVQLLKQLLDPLLKG 928 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN---EGKIPLLFA 114 +++ F L + + + + I +N E + Sbjct: 929 GHKVLIFSQFTKILELIGVCLDEDKIKYSLLTGNIFQDEREDEIALFNSEDEDSTKIFLL 988 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NL + ++ F W+ + ++ + R + G + V V+ + ++ Sbjct: 989 STRAGGLGINLTT-ADTVILFDSDWNPQ-----MDIQAMGRAHRIGQTKPVKVFRFVVRD 1042 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 +++E++L + +K ++ ++ + Sbjct: 1043 SVEEILLFKSFSKRALEQKVIKS 1065 >gi|195395382|ref|XP_002056315.1| GJ10883 [Drosophila virilis] gi|194143024|gb|EDW59427.1| GJ10883 [Drosophila virilis] Length = 1315 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 18/136 (13%) Query: 74 AYHFNSDLARLQKAFPQGRTLDK---------DPCTIQEWNEG---KIPLLFAHPASCGH 121 Y F D+ + + G + +++N + L + G Sbjct: 952 GYEFEGDVGNFKGCWTPGEDYFRLDGSCSVEQRESMCKKFNNASNLRARLFLISTRAGGL 1011 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V Sbjct: 1012 GINLVA-ANRVVIFDVSWNPSHDTQSIFRV-----YRFGQVKPCYIYRLIAMGTMEQKVY 1065 Query: 182 QRLRTKSTIQDLLLNA 197 +R K +++ Sbjct: 1066 ERQVAKQATAKRVIDE 1081 >gi|115462843|ref|NP_001055021.1| Os05g0247900 [Oryza sativa Japonica Group] gi|54291735|gb|AAV32104.1| uknown protein [Oryza sativa Japonica Group] gi|113578572|dbj|BAF16935.1| Os05g0247900 [Oryza sativa Japonica Group] gi|125551533|gb|EAY97242.1| hypothetical protein OsI_19162 [Oryza sativa Indica Group] gi|215701224|dbj|BAG92648.1| unnamed protein product [Oryza sativa Japonica Group] Length = 856 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 19/159 (11%) Query: 52 HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPC 99 H K++ALE ++ I++ + L L+K F ++ Sbjct: 518 HCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQL 577 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I E+N + + G+NL N +V F W+ + + R + Sbjct: 578 LIDEFNRCPSKQVFLISTRAGNLGVNLVS-ANRVVIFDPSWNPAQ-----DLQAQDRSFR 631 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G +R V V+ L+ +++EL+ R K + ++ ++ Sbjct: 632 FGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSG 670 >gi|328771180|gb|EGF81220.1| hypothetical protein BATDEDRAFT_16302 [Batrachochytrium dendrobatidis JAM81] Length = 704 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 70 PIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IV F S L +Q + +D + I + + Sbjct: 553 KSIVFSQFVSFLDLVQWRLIRAGFNVVKLDGRMAPFQRDDVINSFMTDPSITVFLVSLKA 612 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +RI + G R + + +I +N+I+ Sbjct: 613 GGVALNLTE-ASRVFVLDPWWNPAAEDQAFDRI-----HRLGQYRPIKITRIIVENSIES 666 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L K + D + Sbjct: 667 RILMLQEKKKALFDSTVGG 685 >gi|150865976|ref|XP_001385416.2| nucleotide excision repair protein [Scheffersomyces stipitis CBS 6054] gi|149387232|gb|ABN67387.2| nucleotide excision repair protein [Scheffersomyces stipitis CBS 6054] Length = 701 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 50/147 (34%), Gaps = 17/147 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKI 109 + + IV F S L ++ + +D + ++ Sbjct: 541 KLRSDKHTIKSIVFSQFTSMLDLIEWRLKRAGFQTVKLQGSMSPQQRDNTIKYFMDNTEV 600 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q ++R+ + G KR + + Sbjct: 601 EVFLVSLKAGGVALNL-CEASQVFLMDPWWNPSVEWQSMDRV-----HRIGQKRPIRITR 654 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 +++I+ +++ K+ + +N Sbjct: 655 FCIEDSIEMKIIELQEKKANMIHATIN 681 >gi|168042770|ref|XP_001773860.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162674847|gb|EDQ61350.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1566 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 8/104 (7%) Query: 94 LDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D+ I+ +N+ GKI +L A +CG G+ L G + +VF + W+ R Sbjct: 1359 PDERQSIIERFNDRKGKIRVLLASTKACGEGITLT-GASRVVFMDVLWNPAVI-----RQ 1412 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G + AV VY L+A T++E QR+ +K + Sbjct: 1413 AIHRAFRIGQRNAVHVYRLVASGTMEESKYQRMVSKDWKSQSIF 1456 >gi|148237261|ref|NP_001090145.1| helicase-like transcription factor [Xenopus laevis] gi|80476497|gb|AAI08610.1| MGC131155 protein [Xenopus laevis] Length = 999 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 19/166 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQ 102 + +L K IV F S L+ + T K IQ Sbjct: 826 SALMHSLVEQRRKDATIKSIVVSQFTSFLSLIEVALRESGFMFTRLDGSMTQKKRTEAIQ 885 Query: 103 EWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ + G GLNL + + W+ +Q +R + Sbjct: 886 SFQRPDAQSPTIMLLSLKAGGVGLNLTA-ASRVFLMDPAWNPAAEEQCFDRC-----HRL 939 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G + V + + +++++E +L+ K + A K + Sbjct: 940 GQTKEVIITKFVVRDSVEENMLKIQSKKRQLAAGAFGAKKSSASQI 985 Score = 38.2 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 4/47 (8%), Positives = 13/47 (27%), Gaps = 6/47 (12%) Query: 2 KQYHKFQRELYC----DLQGENIEA--FNSASKTVKCLQLANGAVYY 42 + Y + E + + + + + ++ QL Sbjct: 666 EIYESMKNEGKAVISRYVDEGTVLSHYADVLAVLLRLRQLCCHPHLV 712 >gi|328773732|gb|EGF83769.1| hypothetical protein BATDEDRAFT_85620 [Batrachochytrium dendrobatidis JAM81] Length = 1065 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 62/172 (36%), Gaps = 21/172 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIK----ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR- 92 A + K + +K+ L + + +V + L ++ + + Sbjct: 882 HAGSTIRLQSIKSIPSKKLNTLTNDLLTLQKSDPKIKSVVFSQWTRMLDLVEISMREHGI 941 Query: 93 ---------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + + + + +L A S G GLNL + + WW+ Sbjct: 942 NFVRMDGSLSQKNREKVLHTFKTDDTVTVLLATLRSTGVGLNLT-VASCVFMLDPWWN-- 998 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + +E + R + G + V V I +N+++E +L+ K+ + ++ Sbjct: 999 ---ESVEFQAIDRVHRIGQNKPVTVTRYIMRNSVEEKMLEIQHRKAQLAGVI 1047 Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 19/80 (23%), Gaps = 4/80 (5%) Query: 2 KQYHKFQRELYCDLQGENI----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + L I + + + Q+ + + + E + Sbjct: 713 EIYDSLLKHSRHKLMELKIIGKADYMHVFQLLSRMRQMCDHTLLIKSKSLCTEADTASMS 772 Query: 58 ALEVIIEKANAAPIIVAYHF 77 + K A F Sbjct: 773 IPLEEMIKKYTRGNNSAEFF 792 >gi|294656530|ref|XP_002770282.1| DEHA2D07942p [Debaryomyces hansenii CBS767] gi|199431539|emb|CAR65638.1| DEHA2D07942p [Debaryomyces hansenii] Length = 828 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 49/147 (33%), Gaps = 17/147 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKI 109 + + IV F S L ++ + +D + Sbjct: 668 KLRSDRHTIKSIVFSQFTSMLDLIEWRLKRAGFQTVKLQGSMSPQQRDNTIKYFMENTSV 727 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q ++R+ + G KR + + Sbjct: 728 EVFLVSLKAGGVALNL-CEASQVFLMDPWWNPSVEWQSMDRV-----HRIGQKRPIRITR 781 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 +++I+ +++ K+T+ +N Sbjct: 782 FCIEDSIESKIIELQEKKATMIHATIN 808 >gi|194908547|ref|XP_001981791.1| GG12244 [Drosophila erecta] gi|190656429|gb|EDV53661.1| GG12244 [Drosophila erecta] Length = 1277 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++++ +++N + L + G G+NL N +V F + W+ Sbjct: 929 DYFRLDGSCSVEQREAMCKQFNNVTNLRARLFLISTRAGGLGINLVA-ANRVVIFDVSWN 987 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I R+ + G + ++Y LIA T+++ V +R K +++ Sbjct: 988 PSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDE 1039 >gi|30089126|emb|CAD35753.1| X-linked nuclear protein [Dugesia japonica] Length = 1076 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 46/104 (44%), Gaps = 9/104 (8%) Query: 97 DPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +N + ++ L + G G+NL N ++ F + W+ + + Sbjct: 791 RADIQSRFNSFEDHRLRLFLISTRAGGMGVNLVA-ANRVIIFDVSWNPSH-----DVQAI 844 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V+VY ++Q T++E + +R TK ++ +++ Sbjct: 845 FRSYRFGQNKPVYVYRFVSQGTMEEKIYERQVTKQSLSLRVVDE 888 >gi|297192312|ref|ZP_06909710.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197719707|gb|EDY63615.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 775 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 17/153 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGR--------TLDKDPCTI 101 K++ L +++ A N ++V +F LA + +A +G + + Sbjct: 515 KSAKLERLRELVDDAAANGLKVVVFSYFRDVLAAVGEALDEGVFGPVSGSVPAARRQQLV 574 Query: 102 QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+ +L A + G GLNLQ ++++ +E V R + G Sbjct: 575 DEFTAAPGHAVLLAQIEAGGVGLNLQA-ASVVIICEPQVKPT-----MEHQAVARAHRMG 628 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RAV V+ L+A N++D+ +L L +KS + D Sbjct: 629 QVRAVQVHRLLATNSVDQRMLDILESKSRLFDA 661 >gi|281348912|gb|EFB24496.1| hypothetical protein PANDA_003305 [Ailuropoda melanoleuca] Length = 1009 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 841 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 900 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 901 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 955 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 956 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 1003 >gi|164422685|ref|XP_001727986.1| hypothetical protein NCU10809 [Neurospora crassa OR74A] gi|157069777|gb|EDO64895.1| predicted protein [Neurospora crassa OR74A] Length = 702 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 48/140 (34%), Gaps = 17/140 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPL 111 ++ ++ + S L L + Q + I+ + + ++P+ Sbjct: 541 LQSQTGIKHLIFSAWTSSLRYLAQLMQQAGIPHAQIDGRTSNAERLRHIKAFQEDSQVPV 600 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + GL L + + W+ +E + R + G + V V I Sbjct: 601 LLMSIGTGAVGLTLTA-ASHVHIIEPQWNPS-----VEEQAIGRALRMGQTKEVVVTRYI 654 Query: 172 AQNTIDELVLQRLRTKSTIQ 191 + T+++ +L + K I Sbjct: 655 MKGTVEQSILSLQQKKKNIS 674 >gi|320164103|gb|EFW41002.1| chromodomain-helicase-DNA-binding protein 1-like protein [Capsaspora owczarzaki ATCC 30864] Length = 1103 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLNL + ++FF ++ + + R + G R V V Sbjct: 338 CFVFLLSTRAGGLGLNLVS-ADTVIFFDSDFNPQA-----DLQAAARAHRLGQTRPVRVI 391 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+AQ+T++E+VL+R + K + ++ Sbjct: 392 RLVAQHTVEEIVLRRAQRKLELTHAVIQ 419 Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 12/107 (11%), Positives = 34/107 (31%), Gaps = 15/107 (14%) Query: 6 KFQRELYCDLQGENIEAF------NSASKTVKCLQLANGAVYY-------DEEKHWKEVH 52 + Q++ Y + ++I+AF + ++ + N + + Sbjct: 150 QLQKKYYKAILKKDIDAFANPTKTRLMNILMELRKCVNHPYLFDGVEPEPFQLGRHLIDA 209 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K++ L+ ++ K +++ L LQ + Sbjct: 210 STKLRMLDALLPFLKQRGHRVLIFSQMTRMLDILQDYLHFCGYGYER 256 >gi|134078079|emb|CAK40162.1| unnamed protein product [Aspergillus niger] Length = 1166 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 49/160 (30%), Gaps = 24/160 (15%) Query: 53 DEKIKALEVIIEKAN-AAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTI 101 K+ AL + + +V F S L T+ Sbjct: 987 SAKVHALLAHLARVPANTKSVVFSQFTSFLDLISPQLTRAGIHHVRLDGTMPHKARAETL 1046 Query: 102 QEWNE-------GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++N +L + G GLNL + + WW IE + Sbjct: 1047 AQFNRHRHSTAPPPPTVLLISLRAGGVGLNLTA-ASNVFMMDPWWSFA-----IEAQAID 1100 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V + +++I+ +L+ K I L Sbjct: 1101 RVHRMGQTRDVQVTRFVVKDSIEGRMLRVQERKMNIAGSL 1140 >gi|255077082|ref|XP_002502193.1| SNF2 super family [Micromonas sp. RCC299] gi|226517458|gb|ACO63451.1| SNF2 super family [Micromonas sp. RCC299] Length = 786 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 7/116 (6%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSL 137 ++L D ++ +N G+ ++ + G GLNL ++ F Sbjct: 559 AELGLATDRLDGRVPPDARSGLVRNFNAGRGGRVMLLSCVAGGAGLNLVGACRLV-LFDT 617 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 W+ + + R + G R V +Y L+A T++E V QR K Sbjct: 618 SWNPAH-----DNQAMARVWRDGQTRPVTIYRLLAAGTVEEKVFQRQLLKHREAAA 668 >gi|61402625|gb|AAH91795.1| LOC553504 protein [Danio rerio] Length = 1069 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 69/177 (38%), Gaps = 12/177 (6%) Query: 31 KCLQLA----NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV-AYHFNSDLARLQ 85 +C Q A + +Y + K +++ + I + ++ + + ++ F Sbjct: 424 RCKQAAFEAMSDPMYSGKMKVMQKLLNHFIAKKDKVLLFSLSTKLLDVLESFCMAEGLEY 483 Query: 86 KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++E+N + + L + G GLN G N++V F W+ Sbjct: 484 HRLDGNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNF-IGANVVVLFDPTWNPAND 542 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q I+R+ + G R V V+ LI+ T++E++ R K +Q ++ Sbjct: 543 LQAIDRV-----YRIGQCRDVTVFRLISLGTVEEIIYLRQVYKQQLQSSVIGQENAR 594 >gi|281206497|gb|EFA80683.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1959 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 8/116 (6%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 R + I ++N+ + L + G NL G ++ L W+ Sbjct: 1733 RDYYRLDGAVRPQERQNLINKFNDTGNQCKLFIISTKAGSLGTNLTA-GTRVILMDLLWN 1791 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ER V R + G + V+VY LI +++E + RL K ++ ++ Sbjct: 1792 P-----VHERQAVYRCFRIGQTKPVYVYTLIIAGSLEENIYNRLVFKQSLAKRAID 1842 >gi|242214113|ref|XP_002472881.1| predicted protein [Postia placenta Mad-698-R] gi|220728002|gb|EED81905.1| predicted protein [Postia placenta Mad-698-R] Length = 799 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 64/176 (36%), Gaps = 19/176 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA---------- 82 +++ + + K+ AL + ++ IV + S L Sbjct: 600 MSDHLIATWKRGDNNLEPSTKMLALVEHLQEWESTGDKTIVFSQWTSMLDLLETLFSRYG 659 Query: 83 -RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + + ++ Q G ++ G GLNL N L+ L W+ Sbjct: 660 IRSLRYDGKMSREARELVLSQFRKSGGPKVILISTKCGGVGLNLVS-ANRLINMDLGWNY 718 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q +R+ + G ++ VFV L+ +NTI+E +L+ TK + + L Sbjct: 719 ASESQAYDRV-----HRLGQEKEVFVKRLVVRNTIEERMLKLQETKVGLAEAALGE 769 Score = 39.0 bits (89), Expect = 0.38, Method: Composition-based stats. Identities = 10/135 (7%), Positives = 29/135 (21%), Gaps = 3/135 (2%) Query: 2 KQYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 + Y F++ + ++ ++ QL + E + + Sbjct: 306 ELYDNFEKRARIQINRFLKDNNVVKKCVLILRMRQLCCHPNLILRQAEGFEDPTLLVGSD 365 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQK-AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 + + ++ R E +E + Sbjct: 366 ADKEVARANTMLGPQWVMEVWEQLIRVLRSFMARAKASQLEFDDEMDEPEPTCPVCGDLF 425 Query: 119 CGHGLNLQYGGNILV 133 L G+ + Sbjct: 426 MNDSGRLLACGHEIC 440 >gi|254244620|ref|ZP_04937942.1| hypothetical protein PA2G_05487 [Pseudomonas aeruginosa 2192] gi|126197998|gb|EAZ62061.1| hypothetical protein PA2G_05487 [Pseudomonas aeruginosa 2192] Length = 666 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 25/207 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQ------LANGAVYYDEEKHWKEVHDEKIKALEV 61 ++++ L+G+ + + + + Q L + V+ + + K++ Sbjct: 450 RKDVLPSLKGKQRQLLKV-ALSTEERQQYDVLRLEDRPVFARLGALRRYLETVKVRVAMD 508 Query: 62 IIEK-ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKI 109 ++ + +I+ F +A L++ Q +L K I + + Sbjct: 509 LLSELDAEDKVILFCEFKPTVAALKELCEQAGHGCVTLVGNDSLTKRQKAIDRFQQDPDC 568 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G NL N + F L W + + R + G R V V Sbjct: 569 RVFICTTAAAGTGNNLTA-ANYVFFLGLPWTPGQQE-----QAEDRAYRNGQLRMVVVKI 622 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + TIDE + Q L K + L+ Sbjct: 623 PLVEATIDEQLWQLLNAKRQVAQDLIE 649 >gi|254238775|ref|ZP_04932098.1| hypothetical protein PACG_04939 [Pseudomonas aeruginosa C3719] gi|126170706|gb|EAZ56217.1| hypothetical protein PACG_04939 [Pseudomonas aeruginosa C3719] Length = 676 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 25/207 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQ------LANGAVYYDEEKHWKEVHDEKIKALEV 61 ++++ L+G+ + + + + Q L + V+ + + K++ Sbjct: 450 RKDVLPSLKGKQRQLLKV-ALSTEERQQYDVLRLEDRPVFARLGALRRYLETVKVRVAMD 508 Query: 62 IIEK-ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKI 109 ++ + +I+ F +A L++ Q +L K I + + Sbjct: 509 LLSELDAEDKVILFCEFKPTVAALKELCEQAGLGCVTLVGNDSLTKRQKAIDRFQQDPDC 568 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G NL N + F L W + + R + G R V V Sbjct: 569 RVFICTTAAAGTGNNLTA-ANYVFFLGLPWTPGQQE-----QAEDRAYRNGQLRMVVVKI 622 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + TIDE + Q L K + L+ Sbjct: 623 PLVEATIDEQLWQLLNAKRQVAQDLIE 649 >gi|107099852|ref|ZP_01363770.1| hypothetical protein PaerPA_01000872 [Pseudomonas aeruginosa PACS2] gi|37955686|gb|AAP22525.1| putative helicase [Pseudomonas aeruginosa] Length = 657 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 25/207 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQ------LANGAVYYDEEKHWKEVHDEKIKALEV 61 ++++ L+G+ + + + + Q L + V+ + + K++ Sbjct: 441 RKDVLPSLKGKQRQLLKV-ALSTEERQQYDVLRLEDRPVFARLGALRRYLETVKVRVAMD 499 Query: 62 IIEK-ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKI 109 ++ + +I+ F +A L++ Q +L K I + + Sbjct: 500 LLSELDAEDKVILFCEFKPTVAALKELCEQAGHGCVTLVGNDSLTKRQKAIDRFQQDPDC 559 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G NL N + F L W + + R + G R V V Sbjct: 560 RVFICTTAAAGTGNNLTA-ANYVFFLGLPWTPGQQE-----QAEDRAYRNGQLRMVVVKI 613 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + TIDE + Q L K + L+ Sbjct: 614 PLVEATIDEQLWQLLNAKRQVAQDLIE 640 >gi|116052602|ref|YP_792917.1| putative DNA helicase [Pseudomonas aeruginosa UCBPP-PA14] gi|32481700|gb|AAP84214.1| DNA helicase [Pseudomonas aeruginosa PA14] gi|115587823|gb|ABJ13838.1| putative DNA helicase [Pseudomonas aeruginosa UCBPP-PA14] Length = 657 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 25/207 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQ------LANGAVYYDEEKHWKEVHDEKIKALEV 61 ++++ L+G+ + + + + Q L + V+ + + K++ Sbjct: 441 RKDVLPSLKGKQRQLLKV-ALSTEERQQYDVLRLEDRPVFARLGALRRYLETVKVRVAMD 499 Query: 62 IIEK-ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKI 109 ++ + +I+ F +A L++ Q +L K I + + Sbjct: 500 LLSELDAEDKVILFCEFKPTVAALKELCEQAGHGCVTLVGNDSLTKRQKAIDRFQQDPDC 559 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + A+ G G NL N + F L W + + R + G R V V Sbjct: 560 RVFICTTAAAGTGNNLTA-ANYVFFLGLPWTPGQQE-----QAEDRAYRNGQLRMVVVKI 613 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + TIDE + Q L K + L+ Sbjct: 614 PLVEATIDEQLWQLLNAKRQVAQDLIE 640 >gi|297843184|ref|XP_002889473.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335315|gb|EFH65732.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 876 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 61/158 (38%), Gaps = 19/158 (12%) Query: 51 VHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDK---------DP 98 H K++ALE ++ + I++ + L + +G + + Sbjct: 526 KHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQ 585 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++N + + G GLNL N +V F W+ + R Sbjct: 586 SLVDDFNASPSKQVFLISTKAGGLGLNLVS-ANRVVIFDPNWNPSH-----DLQAQDRSF 639 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V V+ L++ +++ELV R K + ++ + Sbjct: 640 RYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAV 677 >gi|167379641|ref|XP_001735221.1| chromodomain helicase DNA binding protein [Entamoeba dispar SAW760] gi|165902890|gb|EDR28599.1| chromodomain helicase DNA binding protein, putative [Entamoeba dispar SAW760] Length = 1044 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + + + G G+NL + ++ + W+ + + Sbjct: 555 RQRAMDHFNAKDSTDFVFLLSTRAGGLGINLTT-ADTVIIYDSDWNPQN-----DLQAQA 608 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G ++ V +Y L + TI+E +L + K + L++ ++K+ Sbjct: 609 RCHRIGQEKTVNIYRLATEGTIEEKILLSAKKKLVLDHLIIQTMEKKG 656 >gi|317026691|ref|XP_001399362.2| SNF2 family helicase/ATPase [Aspergillus niger CBS 513.88] Length = 1116 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 6/127 (4%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 D+ + + + N I +L A + G GLNL + + Sbjct: 983 HDITGFTRLDGTMSLAARSKALEELHNNPDITVLLATIGAGGVGLNLTA-ASKVYIMEPQ 1041 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++ Q ++R+ + G R V + + +I+E + + + K + DL LN Sbjct: 1042 YNPAAVAQAVDRV-----HRIGQTREVTTVQFLMKGSIEEKIFELAKKKQQLADLSLNRG 1096 Query: 199 KKETIHV 205 K + V Sbjct: 1097 KLDKKEV 1103 >gi|224013864|ref|XP_002296596.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220968948|gb|EED87292.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 101 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 7/98 (7%) Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 DK + +N + K+ S G G+NL G + +VF+ W+ ++ Sbjct: 9 DKRQRLMDRFNTDTKVFCFILSTRSGGLGINLT-GADTVVFYDSDWNPA-----MDAQAQ 62 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 R + G R V +Y ++ +++I+E +L + + K + Sbjct: 63 DRAHRIGQTREVHIYRMVTEHSIEENILTKAKQKRNLD 100 >gi|198276225|ref|ZP_03208756.1| hypothetical protein BACPLE_02416 [Bacteroides plebeius DSM 17135] gi|198271037|gb|EDY95307.1| hypothetical protein BACPLE_02416 [Bacteroides plebeius DSM 17135] Length = 558 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 21/207 (10%) Query: 2 KQYHKFQRELYCDL------QGENIEAF---NSASKTVKCLQLANGAVYYDEEKHWKEVH 52 K+Y +R+L L E IE + Q++ + V Sbjct: 341 KEYIDAERDLIMYLQKYKEADDEKIEKALRGEVMVRINILRQIS---ARGKVRDVIEFVK 397 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 D + ++I+ + V S + +K N K ++ Sbjct: 398 DFRENGKKIILFCSLHE---VVDQLKSYFPTAVSVTGRDSQDEKQRAVDSFQNNPKTDII 454 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL L N + F W + Q +R + G K +V YY + Sbjct: 455 ICSIKAAGVGLTLTASSN-VAFVEFPWTYADCCQCEDR-----AHRIGQKDSVTCYYFLG 508 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 + TIDE V + ++ K I + + + Sbjct: 509 RRTIDEKVYRIIQNKKAIAKDVTGSTE 535 >gi|255081212|ref|XP_002507828.1| SNF2 super family [Micromonas sp. RCC299] gi|226523104|gb|ACO69086.1| SNF2 super family [Micromonas sp. RCC299] Length = 1983 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 29/249 (11%), Positives = 75/249 (30%), Gaps = 61/249 (24%) Query: 2 KQYHKF--QRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEK------------ 46 + Y++ +++++ + G ++ + ++ ++ N D + Sbjct: 802 RAYYRMIYEKQVHVLMDGNKSKNVPQLRNLCMELRKVCNHPFLCDGMEEDFANKKKRAVE 861 Query: 47 ---------------------------HWKEVHDEKIKALEVIIEKA--NAAPIIVAYHF 77 K+ L ++ K +++ F Sbjct: 862 LAAEKAAKEAVEKGLEPPAAPAPPQPLDMITQSSGKMMLLNKLLPKLKAEGHKVLIFSQF 921 Query: 78 N---------SDLARLQKAFPQGRTLD-KDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQ 126 DL + G T I +N GK + + G G+ L Sbjct: 922 AIVLNILSDYLDLMGYEHERLDGSTSQADRQAGIDRFNTPGKGFVYLLSTRAGGMGITLT 981 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + + + W+ + + + R + G + V VY L+ + T ++ + + Sbjct: 982 A-ADTAIIYDSDWNPQN-----DLQAMARCHRIGQTKEVKVYRLVTKATYEQSLFETSSK 1035 Query: 187 KSTIQDLLL 195 K + + +L Sbjct: 1036 KYGLDEAVL 1044 >gi|37651342|ref|NP_932651.1| global transactivator-like protein [Choristoneura fumiferana DEF MNPV] gi|37499251|gb|AAQ91650.1| global transactivator-like protein [Choristoneura fumiferana DEF MNPV] Length = 499 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 38/226 (16%) Query: 3 QYHKFQ-------RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW------- 48 Y K + + + + + Q+ + Sbjct: 265 VYDKLKSESQRAYDDAVAGGGDKTRNMQDVLWLLCRLRQMCCHPALTKCAHMFADQATIF 324 Query: 49 -KEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTL---------- 94 + K + + I+++ +++ + L + K Q Sbjct: 325 EPQYASSKCRRVLEIVQQVLDTPNDKVVLVSQWVEFLYIVAKLLRQRGIPILLYTGQLRV 384 Query: 95 DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ ++N + +L G GLNL GGN +V W+ + IE Sbjct: 385 EERTAVENQFNAADSPYRVLLMSINCGGVGLNLT-GGNHIVMLEPHWNPQ-----IELQA 438 Query: 153 VTRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQDLLLN 196 +R + G K+ +VY ++ N+I+ + R K T + + + Sbjct: 439 QSRIHRMGQKKQTYVYKMLNDEDNSIERYMKMRQDKKLTFVNKVFD 484 >gi|66811190|ref|XP_639303.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60467929|gb|EAL65942.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 931 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 61/189 (32%), Gaps = 28/189 (14%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSD 80 + +K K ++ + K+ ++ ++ + ++ ++ Sbjct: 594 VGTSILKL------FPKEWNPKVFQPQYSSKLLFVDRLLANIRNSKSGDKTVIISNYTQT 647 Query: 81 LA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYG 128 L K + +N+ P + + G GLNL G Sbjct: 648 LEVLATMCKTRGYAYFQLDGSTANAKRQQLVNLYNDPARPEFVFLLSSKAGGVGLNL-IG 706 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 GN LV F W+ + + R + G K+ V +Y TI+E + QR TK Sbjct: 707 GNHLVLFDADWNPAN-----DAQSMARVWREGQKKIVSIYRTFTTGTIEEKIFQRQLTKQ 761 Query: 189 TIQDLLLNA 197 + + Sbjct: 762 ALSTSITEG 770 >gi|195349449|ref|XP_002041257.1| GM10241 [Drosophila sechellia] gi|194122952|gb|EDW44995.1| GM10241 [Drosophila sechellia] Length = 1308 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++++ +++N + L + G G+NL N +V F + W+ Sbjct: 959 DYFRLDGSCSVEQREAMCKQFNNVTNLRARLFLISTRAGGLGINLVA-ANRVVIFDVSWN 1017 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I R+ + G + ++Y LIA T+++ V +R K +++ Sbjct: 1018 PSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDE 1069 >gi|115473863|ref|NP_001060530.1| Os07g0660200 [Oryza sativa Japonica Group] gi|113612066|dbj|BAF22444.1| Os07g0660200 [Oryza sativa Japonica Group] Length = 631 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 51/147 (34%), Gaps = 18/147 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIP--LLFAH 115 +++ L L + + ++ +N Sbjct: 19 NHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLS 78 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NL + ++ F W+ + + ++R + G + V +Y + + Sbjct: 79 TRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAMSRAHRIGQQETVNIYRFVTCKS 132 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKET 202 ++E +L+R + K + L++ L E Sbjct: 133 VEEDILERAKKKMVLDHLVIQKLNAEG 159 >gi|225557865|gb|EEH06150.1| DNA repair and recombination protein RAD5B [Ajellomyces capsulatus G186AR] Length = 928 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 64/163 (39%), Gaps = 20/163 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA-----------F 88 +E E KI+AL I++ +A +V + S L ++ Sbjct: 745 NEIDIDSETTSSKIQALLKILKAKGQAPNTKTVVFSQWVSFLDIVESQLVRNGITFARID 804 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + +D N+ +L A C GLNL N ++ WW I Sbjct: 805 GKMSSAKRDAAMNALSNDSNCTVLLASLNVCSVGLNLVA-ANQVILADSWWAPA-----I 858 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 E V R + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 859 EDQAVDRVYRLGQKRPTTIWRLVMENSIEDRVLDKQKEKRTLM 901 >gi|195497929|ref|XP_002096309.1| GE25130 [Drosophila yakuba] gi|194182410|gb|EDW96021.1| GE25130 [Drosophila yakuba] Length = 282 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++F+ W+ +++ + R + G + V VY LI + TI+E +LQR R KS I Sbjct: 2 CVIFYDSDWNPT-----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEI 56 Query: 191 QDLLLNA 197 Q ++++ Sbjct: 57 QRMVISG 63 >gi|221484235|gb|EEE22531.1| helicase, putative [Toxoplasma gondii GT1] Length = 1345 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 68/228 (29%), Gaps = 57/228 (25%) Query: 28 KTVKCLQLANGAVYYD---------------------------EEKHWKEVHDEKIKALE 60 ++ + N + ++ KI A+E Sbjct: 411 LFMQLRKCCNHPALFHLGASCTSAVSAGTRDSEETRSDSVAEGDDAESLLRDSSKIAAVE 470 Query: 61 VII--EKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGK 108 I+ ++V + L ++ + + I ++ Sbjct: 471 AILSFYLPRQEKVVVFSFSTAMLDLVEDYLDEKGIVSARLDGRMGDGERRAAIAAFSAQP 530 Query: 109 IP---------------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + G+GL L + ++ VF + +ER + Sbjct: 531 SENARQSPQGSHEACAAVFLVSVRAGGYGLTLSHCASVCVFLEGG---GDGNPQVERQAI 587 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V V LI ++T++E++ R R K + +L+ + + Sbjct: 588 ARLYRQGQTKKVKVIRLITRSTVEEVMYWRGRQKLKLVADVLSEDEND 635 >gi|9632111|ref|NP_048904.1| hypothetical protein PBCV1_A548L [Paramecium bursaria Chlorella virus 1] gi|2447053|gb|AAC96911.1| similar to Caenorhabditis transcription activator, corresponds to Swiss-Prot Accession Number P41877 [Paramecium bursaria Chlorella virus 1] Length = 458 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 67/198 (33%), Gaps = 19/198 (9%) Query: 17 GENIEAFNSASKTVKCLQLANGA--VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 G+ + ++ Q +Y + E E + K+ L I+ ++ Sbjct: 245 GDGEGRMRLLEQLMRMRQCVTNPQILYANSEDEKWEGNRTKLNMLRKEIQNNPVEKTLIF 304 Query: 75 YHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGL 123 ++ ++ +++ + I+ +N + I S G GL Sbjct: 305 CNWICEMDAIREMLHSIGHKSVTLNGKTPNSQRDVNIKSFNEDNDINFFIIQIESGGIGL 364 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ + SL W+ E + R + G V V LI NT DE VL Sbjct: 365 NLQ-VATRVFINSLSWNATT-----EIQAIARAHRIGQTANVIVKRLIIDNTFDEHVLNL 418 Query: 184 LRTKSTIQDLLLNALKKE 201 + K I + + + E Sbjct: 419 QQKKLEIASEIFDDKRIE 436 >gi|68072323|ref|XP_678075.1| DNA repair protein rad54 [Plasmodium berghei strain ANKA] gi|56498427|emb|CAH96805.1| DNA repair protein rad54, putative [Plasmodium berghei] Length = 860 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 21/138 (15%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 I+ K N + G ++ K I ++ N I + Sbjct: 572 YMEILCKENHYKFVR--------------LDGGISIKKRHKVISDFTNTDDIFIFLLSSK 617 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G G+NL N L+ W+ ++ + R + G K+ ++Y L TID Sbjct: 618 SGGCGINL-ISSNRLILLDPDWNPAN-----DKQALARVWREGQKKICYIYRLFCTGTID 671 Query: 178 ELVLQRLRTKSTIQDLLL 195 E V QR +K + +++ Sbjct: 672 EKVYQRQISKDGLSSMIV 689 >gi|325190695|emb|CCA25191.1| DNA repair and recombination protein RAD54 putative [Albugo laibachii Nc14] Length = 910 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 72/246 (29%), Gaps = 60/246 (24%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD------------------ 43 K Y +F E + N +L N + Sbjct: 443 KLYKRFL-ESKAMRNIMKQQNVNVLPSITALKKLCNHPLLLFKDDGTALLKLPGFEDCQQ 501 Query: 44 --------------------EEKHWKEVHDEKIK---ALEVIIEKANAAPIIVAYHFN-- 78 +++ K++ L ++ K I+V ++ Sbjct: 502 IIASEQKNNFTSGQRAFSTNQKQTCHPGWSGKLQLLDHLMQMMRKETKERIVVVSNYTQT 561 Query: 79 --------SDLARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYG 128 S+ + K + +N+ + G GLNL G Sbjct: 562 LDLVSLLCSERNWPFVRLDGTISPKKRQQMVDVFNDPTTHSFAFLLSSKAGGCGLNL-IG 620 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N LV F W+ ++ R + G K+ +VY +A +++E + QR +K Sbjct: 621 ANRLVLFDPDWNPAT-----DKQAAARVWREGQKQMCYVYRFLATGSLEEKIFQRQLSKE 675 Query: 189 TIQDLL 194 +Q ++ Sbjct: 676 GLQSIV 681 >gi|326670150|ref|XP_689596.5| PREDICTED: hypothetical protein LOC553504 [Danio rerio] Length = 1269 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 74/177 (41%), Gaps = 12/177 (6%) Query: 31 KCLQLA----NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 +C Q A + +Y + K +++ + I + ++ + + ++ L+ Sbjct: 426 RCKQAAFEAMSDPMYSGKMKVMQKLLNHFIAKKDKVLLFSLSTKLLDVLESYCMAEGLEY 485 Query: 87 AFPQGRTLDKDP-CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 G T KD ++E+N + + L + G GLN G N++V F W+ Sbjct: 486 HRLDGNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNF-IGANVVVLFDPTWNPAND 544 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q I+R+ + G R V V+ LI+ T++E++ R K +Q ++ Sbjct: 545 LQAIDRV-----YRIGQCRDVTVFRLISLGTVEEIIYLRQVYKQQLQSSVIGQENAR 596 >gi|23193483|gb|AAN14536.1|AF459086_1 SNF2P [Oryza sativa Japonica Group] gi|23193485|gb|AAN14537.1| SNF2P [Oryza sativa Japonica Group] Length = 894 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 79/230 (34%), Gaps = 40/230 (17%) Query: 2 KQY-HKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------EKHWKEV 51 K Y ++EL G + + ++ + ++ + E Sbjct: 308 KLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEPEPYVEGEHLVQ 367 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------------ 97 K+ L++I++K + +++ L LQ + + Sbjct: 368 ASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFA 427 Query: 98 ----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +++ N+ + + G GLNL G + ++F+ W+ + Sbjct: 428 AIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNL-IGADTVIFYEQDWNPQA---- 482 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ + R + G V L++Q TI+E++++R K + ++ Sbjct: 483 -DKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGE 531 >gi|328707730|ref|XP_001950458.2| PREDICTED: hypothetical protein LOC100159378 [Acyrthosiphon pisum] Length = 1320 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 19/149 (12%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEWNEGK 108 + ++ + N I+ + S L ++K F + K I+E+N+ Sbjct: 1157 QKVLIEGNKEKAIIVSQWPSFLYLIRKHLETTGNAKMEMFSGAIPIPKRNKIIREFNQPN 1216 Query: 109 I--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL N + + W+ + Q +R+ + G + V+ Sbjct: 1217 SGPQILLLSLKAGGVGLNLMA-ANHMFLVDIHWNPQLEAQACDRV-----YRVGQTKPVY 1270 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 VY I NTI+ ++ K + D L Sbjct: 1271 VYKFICSNTIETRIMNIQTHKLQMADNLF 1299 Score = 40.9 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 5/54 (9%), Positives = 19/54 (35%), Gaps = 7/54 (12%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 +K + +F+ + I+ ++ ++ Q+ + + + E Sbjct: 1034 IKLFRQFK-------EINEIQTYHILVLLLRLRQICCHPILIKGPITEESIKKE 1080 >gi|330845768|ref|XP_003294743.1| hypothetical protein DICPUDRAFT_100046 [Dictyostelium purpureum] gi|325074740|gb|EGC28734.1| hypothetical protein DICPUDRAFT_100046 [Dictyostelium purpureum] Length = 1445 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 21/157 (13%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL--------------ARLQKAFPQGRTLDKDPCTI 101 + + ++ IV + S L F T + + Sbjct: 1263 LHTDMLNDKEKEDEKCIVFSQWTSMLSLIENIFIENGWKKNIHYSRFDGTLTSVQRDRVL 1322 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 Q +N + ++ G GLNL N + WW++ + R + G Sbjct: 1323 QAFNQDDGPRVMLMGLRCGGVGLNLTR-ANRVYLMDPWWNIALQ-----NQAIGRVHRMG 1376 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K+ V+V I + +I+ +LQ +K + + + + Sbjct: 1377 QKKEVYVKNYIMEESIEIRILQLQESKEELAEAIFSD 1413 >gi|302676696|ref|XP_003028031.1| hypothetical protein SCHCODRAFT_60278 [Schizophyllum commune H4-8] gi|300101719|gb|EFI93128.1| hypothetical protein SCHCODRAFT_60278 [Schizophyllum commune H4-8] Length = 765 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 69/194 (35%), Gaps = 19/194 (9%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQ--LANGAVYYDEEKHWKEVHDEKIKA 58 +++Y + + D+ + + + + ++ LQ + + +E K + K Sbjct: 434 IERYADLNKRVMKDIYADEGKRY-KLTYSLAILQRDMCGKLDQWYKEGSNKVLIFTKSLK 492 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 L ++E +H D +K + + + ++ + Sbjct: 493 LMEVLE----------FHMKRDSYEFRKLDGSVPQKYRQKYIDEFNEQPEVFCFLISTLA 542 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NL N +V F W+ + + R + G R V+VY L+ +++E Sbjct: 543 GGTGINLTA-ANKVVIFDPNWNPAH-----DLQAMDRAFRYGQTRDVYVYRLLGGGSLEE 596 Query: 179 LVLQRLRTKSTIQD 192 LV R K Sbjct: 597 LVYARQLYKQQQMA 610 >gi|302505721|ref|XP_003014567.1| hypothetical protein ARB_07129 [Arthroderma benhamiae CBS 112371] gi|291178388|gb|EFE34178.1| hypothetical protein ARB_07129 [Arthroderma benhamiae CBS 112371] Length = 921 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 17/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 +V + S L ++ + + +D + + + ++ A Sbjct: 766 GTKTVVFSQWTSFLDLIEPHLVLYNINFARIDGKMNSAKRDAAMSKFSRDSECTVMLASL 825 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 C GLNL N +V WW IE V R + G R ++ L+ +N+I Sbjct: 826 NVCSVGLNLVA-ANQVVLADSWWAPA-----IEDQAVDRVYRLGQTRPTTIWRLVMENSI 879 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 ++ VL + K + Sbjct: 880 EDRVLDIQKEKRELMSTAFQE 900 Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats. Identities = 3/30 (10%), Positives = 10/30 (33%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEE 45 +G+ + ++ Q+ N + Sbjct: 612 KGKKTTYSHVLEVLLRLRQVCNHWKLCHDR 641 >gi|212535646|ref|XP_002147979.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210070378|gb|EEA24468.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1784 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 62/161 (38%), Gaps = 8/161 (4%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA--YHFNSDLARLQKAFPQGRTLD 95 + +K++ +E ++ + I+ + + P + S R + + Sbjct: 1378 DPKHSYRADIFKKIVEESVRVGDKILCFSQSIPSLNYLETLLRSSGVRFNRLDGKTAVKS 1437 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + N I + + G GLN+ G N ++ F ++ E V R Sbjct: 1438 RQEAVKDFNNRDDIKVYLISTRAGGLGLNIT-GANRVIIFDFSFNPT-----WEEQAVGR 1491 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V++Y ++ T +E+V + K+ + +++ Sbjct: 1492 AYRLGQKKPVYIYRFLSGGTYEEVVHNKSIFKTQLAMRVVD 1532 >gi|297741672|emb|CBI32804.3| unnamed protein product [Vitis vinifera] Length = 819 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 6/86 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + G G+NL + + WW+ +E + R + G K V + L Sbjct: 713 VLLASLKASGAGINLTA-ASRVYLLEPWWNPA-----VEEQAMDRVHRIGQKEDVKIVRL 766 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 IA+N+I+E +L+ K + Sbjct: 767 IARNSIEERILELQERKKKLAKEAFG 792 >gi|195155527|ref|XP_002018655.1| GL25835 [Drosophila persimilis] gi|194114808|gb|EDW36851.1| GL25835 [Drosophila persimilis] Length = 1332 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 53/150 (35%), Gaps = 18/150 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGKIP--LL 112 KAN +++ L L+ + + I +++ + Sbjct: 12 KANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVF 71 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL + ++ + W+ + + R + G ++ V +Y L+ Sbjct: 72 LLCTKAGGLGINLTA-ADTVIIYDSDWNPQN-----DLQAQARCHRIGQRKMVKIYRLLC 125 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKET 202 +NT + + + K + +L ++ + Sbjct: 126 RNTYEREMFDKASMKLGLDKAVLQSMNTQG 155 >gi|195158016|ref|XP_002019890.1| GL11967 [Drosophila persimilis] gi|194116481|gb|EDW38524.1| GL11967 [Drosophila persimilis] Length = 220 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 5/66 (7%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ W+ +++ + R + G + V VY LI + TI+E +LQR R KS IQ Sbjct: 3 VIFYDSDWNPT-----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQ 57 Query: 192 DLLLNA 197 ++++ Sbjct: 58 RMVISG 63 >gi|164423632|ref|XP_962645.2| hypothetical protein NCU07975 [Neurospora crassa OR74A] gi|157070175|gb|EAA33409.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 898 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 20/174 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA------- 87 + DEE+ E K +A+ +++ + II+ + S L +Q Sbjct: 710 HSATQDEEELESETKSSKTEAVLALVKGTLDKEGSKIIIFSQWTSFLTIIQHQLDEAGYT 769 Query: 88 ---FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + I+ + + +L A C GLNL + ++ WW Sbjct: 770 YTRIDGSMNAAQRDAAIRALDYDPNTRILLASLGVCSVGLNLVS-ADTVILADSWWAPA- 827 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 IE V R + G R V+ L+ N+I+E VL + K + Sbjct: 828 ----IEDQAVDRVHRLGQTRPTTVWRLVMDNSIEERVLDIQKEKRELVGKAFQE 877 >gi|317034188|ref|XP_001396165.2| DNA repair protein RAD16 [Aspergillus niger CBS 513.88] Length = 652 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 53/155 (34%), Gaps = 17/155 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKI 109 + K IV F S L ++ T + +I+ + N + Sbjct: 490 KLRSKKQTLKSIVFSQFTSMLQLVEWRLRRAGFNTVMLDGTMTPAQRQNSIEYFMNNVDV 549 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q +R + G +R + Sbjct: 550 EVFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQRRPCVITR 603 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 L +++++ ++ K+ + + +N + E + Sbjct: 604 LCIEDSVESRIVLLQEKKANLINGTINKDQGEALE 638 >gi|302819150|ref|XP_002991246.1| hypothetical protein SELMODRAFT_429595 [Selaginella moellendorffii] gi|300140957|gb|EFJ07674.1| hypothetical protein SELMODRAFT_429595 [Selaginella moellendorffii] Length = 1551 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 52/169 (30%), Gaps = 29/169 (17%) Query: 52 HDEKIKALEVIIEKAN------------AAPIIVAYHFNSDLARLQKAFPQGRTLDKD-- 97 KI A+ + +V + S L ++ + + Sbjct: 950 SSSKINAVMERLMNLPVTSPAAAGKKAVTEKALVFSQWTSLLDLVEPRLEKAGLEFRRLD 1009 Query: 98 --------PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + E+NE ++ ++ GLN+ + ++ +WW+ + Sbjct: 1010 GTMSVMERDAAVCEFNEKPEVSVMLMGLKVGSLGLNMVAACH-VLLLDVWWNPT-----V 1063 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E + R + G R V V + TI++ +L K + Sbjct: 1064 EDQAIDRAHRIGQTRDVHVTRFTVKKTIEDRILALQEQKKQMVSSAFGE 1112 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 11/103 (10%), Positives = 21/103 (20%), Gaps = 6/103 (5%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y ++ Q N ++ Q E+K K +E Sbjct: 816 YDSLEQRSRDKFQSYQRRGTVQKNYANIMVLLLRLRQACCHRSLVPEDKESKIEDEESNI 875 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT 100 + + F S + + L Sbjct: 876 DAKENVSICTICEDAPEQPFLSCCGHVFCSQCISEKLLTSEEL 918 >gi|94268376|ref|ZP_01291158.1| SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box helicase-like [delta proteobacterium MLMS-1] gi|93451632|gb|EAT02425.1| SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box helicase-like [delta proteobacterium MLMS-1] Length = 1022 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 18/184 (9%) Query: 32 CLQ--LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF- 88 Q +A A +++ +++ + + + +V + +++ Sbjct: 585 LQQARMACDAAGLVDKESVGSPKIDELAQILDEVCLQSGLKAVVFSQWELMTRMVEQRLR 644 Query: 89 ---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 G K ++ + L+F + G GLNLQ ++LV + W Sbjct: 645 RLGIGYVRLHGGVPTAKRGELLERFRSDDSVLVFLSTDAGGVGLNLQS-ASVLVNLDVPW 703 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +Q RI + G V + ++A N+ +E VL ++ K + D ++ Sbjct: 704 NPAVLEQRNGRI-----HRLGQPNKVQIITMVAANSYEEQVLSLVQNKQALFDQVIAEDA 758 Query: 200 KETI 203 E + Sbjct: 759 SEDV 762 >gi|254580745|ref|XP_002496358.1| ZYRO0C16544p [Zygosaccharomyces rouxii] gi|238939249|emb|CAR27425.1| ZYRO0C16544p [Zygosaccharomyces rouxii] Length = 759 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 45/147 (30%), Gaps = 17/147 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IV F S L + + +D + + + Sbjct: 608 KSIVFSQFTSMLDLIDWRLKRAGFETVKLQGSMSPTQRDETIKYFMKNIRCEVFLVSLKA 667 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 668 GGVALNL-CEASQVFIMDPWWNPSVEWQSGDRV-----HRIGQYRPVKITRFCIEDSIES 721 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 +++ K+ + +N + + Sbjct: 722 RIIELQEKKANMIHATINQDEAAINRL 748 >gi|150866903|ref|XP_001386652.2| hypothetical protein PICST_33727 [Scheffersomyces stipitis CBS 6054] gi|149388159|gb|ABN68623.2| conserved hypothetical protein [Scheffersomyces stipitis CBS 6054] Length = 832 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 78/219 (35%), Gaps = 36/219 (16%) Query: 8 QRELYCDLQGE----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 +R + + + I + + ++ + N Y E K+ + K +++++ Sbjct: 518 KRLMLLQVLHKKIRREIRGLSLQNSMMQLRNICNSPYIYFEPFPIKDSTSHEKKFMDILV 577 Query: 64 EKAN---------------AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KD 97 + ++ I++ F L L F +D Sbjct: 578 QNSSKIQVLQQLCFPLIEANHKILIFSQFTKLLDLLHDWFNYQNIKICRLDGSTSQAVRD 637 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 Q ++ + + G G+NL + ++ F W+ + ++ + R Sbjct: 638 EQITQFNSDKDTKVFLLSTRAGGLGINLTA-ADTVILFDNDWNPQ-----MDLQAIDRVH 691 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G V V+ + +++I+EL++ +K ++ L++ Sbjct: 692 RIGQTNPVKVFRFLIRDSIEELLISSSCSKRFLETLVIQ 730 >gi|258576005|ref|XP_002542184.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237902450|gb|EEP76851.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 960 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 ++ ++V H L LQ F + + + ++N + + + Sbjct: 615 HSHGDKVLVFSHSVRLLKMLQLLFNHTSYNVSYLDGAMSYEDRAKVVNDFNADPRQFVFL 674 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G R V V+ L++ Sbjct: 675 ISTKAGGVGLNITS-ANKVVVVDPNWNPSH-----DLQAQDRAYRIGQLRDVEVFRLVSA 728 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 729 GTIEEIVYARQIYKQQQAN 747 >gi|315051734|ref|XP_003175241.1| chromatin-remodeling complex ATPase chain isw-1 [Arthroderma gypseum CBS 118893] gi|311340556|gb|EFQ99758.1| chromatin-remodeling complex ATPase chain isw-1 [Arthroderma gypseum CBS 118893] Length = 945 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 AN ++V H L LQ F + + + +N + + + Sbjct: 557 HANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNVVNAFNSDPRQFVFL 616 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G R V V+ L++ Sbjct: 617 ISTKAGGVGLNITS-ANKVVVVDPNWNPA-----YDLQAQDRAYRIGQLRDVEVFRLVSA 670 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 671 GTIEEIVYARQIYKQQQAN 689 >gi|167516624|ref|XP_001742653.1| hypothetical protein [Monosiga brevicollis MX1] gi|163779277|gb|EDQ92891.1| predicted protein [Monosiga brevicollis MX1] Length = 649 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEKANA----APIIVAYHFNSDLARLQKAFPQG----------RTLDKD 97 KI+A+ + + IV F + L L+ + + Sbjct: 478 SSTKIEAILEELRSGQSASSSIKTIVFSQFTTFLDLLEWRLQRAGIRCVKLDGRMSPQHR 537 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + + + G LNL + + WW+ Q ++RI Sbjct: 538 ADVIEAFNTQPHLTAFLISLKAGGLALNLVS-ASRCIICDPWWNPATESQAMDRI----- 591 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V V LI +N+I+ + Q K + + + Sbjct: 592 HRLGQNRPVEVIRLIVENSIESRIDQLQEKKRLLFESTVG 631 >gi|329664188|ref|NP_001192361.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Bos taurus] gi|297475700|ref|XP_002688182.1| PREDICTED: KIAA1122 protein-like [Bos taurus] gi|296486709|gb|DAA28822.1| KIAA1122 protein-like [Bos taurus] Length = 1029 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 842 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 901 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 902 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 956 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI Q TI+E +L+ + K ++ + Sbjct: 957 -YNDKQAEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDM 1004 >gi|300933243|ref|ZP_07148499.1| hypothetical protein CresD4_04190 [Corynebacterium resistens DSM 45100] Length = 836 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 17/166 (10%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLA--------RLQKAF 88 G D + + K++ + +++ A+ A I+ +F S L R Sbjct: 638 GHF-MDMRQAFSGPRSAKMERITELLDDGADGAKTIIFTYFRSVLDGLVAHLGDRAFGPI 696 Query: 89 PQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + + + ++ +L + GLN+Q + +V F + Sbjct: 697 AGGVSHQERQKAVDDFTAASPGAVLVCQITAASEGLNIQA-ASRVVIFEPQLNPA----- 750 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 +E V R + G R V V+ L+ ++++E + L K + + Sbjct: 751 VEAQAVARAHRMGQIRTVEVHRLLTPDSVEEQLTAMLADKRALFER 796 >gi|146229770|gb|ABQ12335.1| global transactivator-like protein [Antheraea pernyi nucleopolyhedrovirus] Length = 495 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 66/223 (29%), Gaps = 35/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKE-------- 50 Y + E A + Q+ +KE Sbjct: 264 VYDCLKSESQRAFDEAVAGAPRGMQAVLWLLCRLRQMCCHPALAKCADLFKEQAHIFEPG 323 Query: 51 VHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKD 97 K + +++ + +++ + L + + + ++ Sbjct: 324 YKSSKCRRALELVQRVLDSPDDKVVLVSQWVEFLHIVAEQLRALSVPVLLYTGRLRTEER 383 Query: 98 PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +N + +L G GLNL GGN LV W+ + +E R Sbjct: 384 AAVENRFNDADSPYRVLLMSIKCGGVGLNLT-GGNHLVLLEPHWNPQ-----VELQAQGR 437 Query: 156 QRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ VY ++ +N+++ + R K D + + Sbjct: 438 IHRLGQRKRAHVYKMLVDEENSVERYMKTRQDKKLEFVDKVFD 480 >gi|291236092|ref|XP_002737975.1| PREDICTED: predicted protein-like, partial [Saccoglossus kowalevskii] Length = 759 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 6/104 (5%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + + + + + G GLN+ G NI++ F W+ Q Sbjct: 26 PVRMNYVHEFNQDKSVSVCLISTKAGGLGLNMT-GANIVIIFDPNWNPAHDQ-----QAQ 79 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G +R V VY LI+ TI+E + R K I L+++ Sbjct: 80 DRAYRIGQQRDVKVYRLISSGTIEENMYLRQIYKQQIASTLVSS 123 >gi|115457136|ref|NP_001052168.1| Os04g0177300 [Oryza sativa Japonica Group] gi|113563739|dbj|BAF14082.1| Os04g0177300 [Oryza sativa Japonica Group] Length = 664 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 65/177 (36%), Gaps = 19/177 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR------- 92 + + K+ L I+E + IV F S L+ F Q Sbjct: 486 FQVDPENNWKDSCKVIKLIKILEGLQEKREKSIVFSQFTSFFDLLEVPFNQKGIKFLRFD 545 Query: 93 ---TLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++E++E K +L + G GLNL + + WW+ +Q I Sbjct: 546 GKLSQKHREKVLKEFSESKDKLVLLMSLKAGGVGLNLTA-ASNVFLMDPWWNPAVEEQAI 604 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RI + G KRAV V I ++T++E + + K + L + + + Sbjct: 605 MRI-----HRIGQKRAVQVRRFIVKDTVEERMQKVQACKQRMISGALTDDEVRSARI 656 Score = 43.2 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 45/209 (21%), Gaps = 46/209 (22%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y R N ++ Q + + K Sbjct: 330 YEALFRRSKVQFDKFVAQGSVLNNYANILELLLRLRQCCDHPFLVISRADTQ-----KYT 384 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 L+ + A F + R + ++E +G Sbjct: 385 DLDEL-----------AQRFLDGVQRDSARRSAPPSQAYVEEVVEEIRQGATTECPICLE 433 Query: 118 SCGHGLNLQYGGNIL---VFFSLWWDLEEHQQMIER--------IGVTRQRQAGF----- 161 S L + + S W + R I + Q + Sbjct: 434 SASDDPVLTPCAHRMCRECLLSSWRTPSGGPCPLCRSPITKSELITLPSQCRFQVDPENN 493 Query: 162 -KRAVFVYYLIAQNTIDELVLQRLRTKST 189 K + V LI +L+ L+ K Sbjct: 494 WKDSCKVIKLI-------KILEGLQEKRE 515 >gi|156062442|ref|XP_001597143.1| hypothetical protein SS1G_01337 [Sclerotinia sclerotiorum 1980] gi|154696673|gb|EDN96411.1| hypothetical protein SS1G_01337 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1130 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 65/207 (31%), Gaps = 21/207 (10%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 ++E E+ ++K K L +G + +K + Sbjct: 915 LKQEEVDK-DEESRLKSKESAKAGKDLSSYSGPHTKTIALIHDLLESKKES---ELNPNQ 970 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAH 115 +V + S L +Q A + + I ++ Sbjct: 971 PPIKSVVFSGWTSHLDLIQFALQENNIPYTRLDGKMTRIARSNAMENFREDPTIVVILVS 1030 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 ++ G GLNL N + ++ Q I+R+ + G +R V I N+ Sbjct: 1031 ISAGGLGLNLTT-ANKVYVMEPQFNPAAEAQAIDRV-----HRLGQRREVQTVRFIMNNS 1084 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKET 202 +E +L+ K + L +++ K Sbjct: 1085 FEEKMLKIQDKKQKLASLSMDSQKGRL 1111 >gi|302679614|ref|XP_003029489.1| hypothetical protein SCHCODRAFT_111676 [Schizophyllum commune H4-8] gi|300103179|gb|EFI94586.1| hypothetical protein SCHCODRAFT_111676 [Schizophyllum commune H4-8] Length = 1059 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 50/144 (34%), Gaps = 23/144 (15%) Query: 60 EVIIEKANAAPIIVAYHFNS---------DLARLQKAFPQGRTLD-KDPCTIQEWNEGKI 109 I + ++ H+ S D R + G T K + ++N+ Sbjct: 734 LKYIYEHTDEKVVFVSHYTSSLNILSAYCDRKRYKYNRLDGNTPPAKRQEYVNQFNKSTQ 793 Query: 110 P---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + G G+NL G + L+ F W+ + R + G KR V Sbjct: 794 RSNFIFLLS----GVGINLT-GASRLILFDCDWNPS-----YDLQSAARCHRDGQKRPVH 843 Query: 167 VYYLIAQNTIDELVLQRLRTKSTI 190 VY + IDE + QR TK + Sbjct: 844 VYRFMTAGLIDEKIYQRQVTKLGL 867 >gi|291383503|ref|XP_002708309.1| PREDICTED: RAD26L hypothetical protein-like [Oryctolagus cuniculus] Length = 1644 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 497 KMKVLQQLLNHCRRNRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 541 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N+++ F W+ Sbjct: 542 LDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPAN--- 597 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 598 --DLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQLYKQQLHCVVVGSENAK 650 >gi|158300708|ref|XP_552266.3| AGAP011966-PA [Anopheles gambiae str. PEST] gi|157013291|gb|EAL38818.3| AGAP011966-PA [Anopheles gambiae str. PEST] Length = 1082 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 56/162 (34%), Gaps = 21/162 (12%) Query: 49 KEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------- 96 E KI+ ++E+ I+ + S L L + Sbjct: 906 IERPSSKIEKTMQLLEEKIFHTDDKAIIVSQWTSMLDILATHLSERNVPFVSLTGKVQVK 965 Query: 97 -DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N GK ++ + G GLNL G N L+ W+ + E Sbjct: 966 FRNDIVLDFNKPSGKSKVMLLSLTAGGVGLNL-VGANHLLLLDPHWNPQL-----EAQAQ 1019 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G + V+++ + T+++ + K I D +L Sbjct: 1020 DRVYRVGQTKPVYIWKFMCAETVEQKIHALQEHKLGIADGVL 1061 >gi|296424567|ref|XP_002841819.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638068|emb|CAZ86010.1| unnamed protein product [Tuber melanosporum] Length = 823 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 52/152 (34%), Gaps = 19/152 (12%) Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTI 101 K L+ ++ N +++ + L L F +LD + Sbjct: 418 GKWIVLQKLLKFWHQNDDKVLIFSYSLQLLRILHKLFQSTEYNVCYFDGSMSLDDRTNVV 477 Query: 102 QEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N + + G GLN+ N +V F W+ + R + G Sbjct: 478 AEFNSDPSQFVFLISTRAGGVGLNITA-ANKVVIFDPNWNPS-----YDLQAQDRAYRIG 531 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R V V+ LI TI+E+V R K + Sbjct: 532 QTRDVEVFRLILAGTIEEIVYARQIYKQQQAN 563 >gi|303278366|ref|XP_003058476.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226459636|gb|EEH56931.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 1251 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 52/160 (32%), Gaps = 32/160 (20%) Query: 69 APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE-GKIPLLFAHPA 117 IV + S + + + + + ++ + + + ++ Sbjct: 1074 NKAIVFSQYTSMIDIAEWRLKKEKFVVAKLLGSMPVTQRAANLKAFRDDPNVSVILMSLK 1133 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE--------------------RIGVTRQR 157 S G GLNLQ N + WW+ Q + V R Sbjct: 1134 SGGEGLNLQA-ANYVFVLEPWWNPAVEMQARDAPAGPRGFILYFTHPSVSTFDRAVMRAH 1192 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G +RAV +NTI+E ++Q K + + ++ Sbjct: 1193 RIGQRRAVTAVRFSTKNTIEERMMQLQEKKRLVFEGCMDG 1232 >gi|198455069|ref|XP_001359844.2| GA18248 [Drosophila pseudoobscura pseudoobscura] gi|198133079|gb|EAL28996.2| GA18248 [Drosophila pseudoobscura pseudoobscura] Length = 1506 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 18/135 (13%) Query: 75 YHFNSDLARLQKAFPQGRTLDK---------DPCTIQEWNEG---KIPLLFAHPASCGHG 122 Y F D+ + + G+ + + +N + L + G G Sbjct: 1127 YEFEGDVGEFKGCWTNGKDYFRLDGSCSVEQREAMCKTFNNVANLRARLFLISTRAGGLG 1186 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V + Sbjct: 1187 INLVA-ANRVVIFDVSWNPSHDTQSIFRV-----YRFGQVKPCYIYRLIAMGTMEQKVYE 1240 Query: 183 RLRTKSTIQDLLLNA 197 R K +++ Sbjct: 1241 RQVAKQATAKRVIDE 1255 >gi|195054315|ref|XP_001994071.1| GH17632 [Drosophila grimshawi] gi|193895941|gb|EDV94807.1| GH17632 [Drosophila grimshawi] Length = 1050 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 21/159 (13%) Query: 52 HDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 K+ + I++ + +I+ + S L L+ Q + Sbjct: 879 PSTKMLKVLEILKTNILKSDDKVIIVSQWTSMLDILRDLLQQEKLAALSLNGSIPVKNRQ 938 Query: 99 CTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+N+ + +L + G GLNL G N L+ L W+ + E R Sbjct: 939 NIVNEFNDARNSKRILLLSLTAGGVGLNL-IGANHLILLDLHWNPQL-----EAQAQDRI 992 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ VF+Y ++ T+++ + K + + +L Sbjct: 993 YRVGQKKDVFIYKIVCLETVEQRIKALQDRKMALAEGVL 1031 Score = 40.9 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 18/63 (28%), Gaps = 4/63 (6%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA----VYYDEEKHWKEVHDEKIKAL 59 Y ++ + +++ ++ Q+ +EE HDE Sbjct: 758 YKMHEKFSRMAGHNKEVKSHEILVLLLRLRQICCHPGLIDSMLEEEGSTSIGHDESDGYT 817 Query: 60 EVI 62 I Sbjct: 818 HEI 820 >gi|326332827|ref|ZP_08199085.1| ATP-dependent RNA helicase [Nocardioidaceae bacterium Broad-1] gi|325949385|gb|EGD41467.1| ATP-dependent RNA helicase [Nocardioidaceae bacterium Broad-1] Length = 735 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 50/128 (39%), Gaps = 6/128 (4%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 F R + ++ + N+ ++ ++ + G G+NLQ N+++ Sbjct: 584 FEERGIRYSTIRGDQTSKAREKAIDEFMNDPEVEIIVCSLTAAGVGVNLQAASNLVLAEL 643 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W D E+ + R + G V + +IA TID + + + +K+ + L+ Sbjct: 644 SWTDAEQT------QAIDRVHRIGQTEPVTAWRIIASQTIDTRIAELIDSKAGLAARALD 697 Query: 197 ALKKETIH 204 +E Sbjct: 698 GSDEEVTD 705 >gi|302894367|ref|XP_003046064.1| hypothetical protein NECHADRAFT_91099 [Nectria haematococca mpVI 77-13-4] gi|256726991|gb|EEU40351.1| hypothetical protein NECHADRAFT_91099 [Nectria haematococca mpVI 77-13-4] Length = 884 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 20/152 (13%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDP 98 K +A+ I++ + + ++V + S L ++ +T +D Sbjct: 711 SSKTEAMLQILKATVRKPGSKVVVFSQWTSFLNIIEVQLKAEGIGFTRIDGSMKTDKRDS 770 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 N+ ++ A A C GLNL + ++ WW IE + R + Sbjct: 771 AIEALDNDPDTRVMLASLAVCSVGLNLVA-ADTVILSDSWWAPA-----IEDQAIDRVHR 824 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G R V+ L+ + +++E VL + K + Sbjct: 825 LGQTRETTVFRLVMEGSVEERVLNIQKEKREL 856 Score = 36.3 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 16/52 (30%), Gaps = 8/52 (15%) Query: 2 KQYHKFQRELYCDLQ--------GENIEAFNSASKTVKCLQLANGAVYYDEE 45 ++Y E L+ G+ N + ++ Q+ N E Sbjct: 555 RKYDALLDEARGVLEAWQARSSSGQQGRFQNVLERLLRLRQVCNHWTLCKER 606 >gi|195157502|ref|XP_002019635.1| GL12501 [Drosophila persimilis] gi|194116226|gb|EDW38269.1| GL12501 [Drosophila persimilis] Length = 1502 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 18/135 (13%) Query: 75 YHFNSDLARLQKAFPQGRTLDK---------DPCTIQEWNEG---KIPLLFAHPASCGHG 122 Y F D+ + + G+ + + +N + L + G G Sbjct: 1123 YEFEGDVGEFKGCWTNGKDYFRLDGSCSVEQREAMCKTFNNVANLRARLFLISTRAGGLG 1182 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL N +V F + W+ Q I R+ + G + ++Y LIA T+++ V + Sbjct: 1183 INLVA-ANRVVIFDVSWNPSHDTQSIFRV-----YRFGQVKPCYIYRLIAMGTMEQKVYE 1236 Query: 183 RLRTKSTIQDLLLNA 197 R K +++ Sbjct: 1237 RQVAKQATAKRVIDE 1251 >gi|195038055|ref|XP_001990476.1| GH18228 [Drosophila grimshawi] gi|193894672|gb|EDV93538.1| GH18228 [Drosophila grimshawi] Length = 1336 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++++ +++N + L + G G+NL N +V F + W+ Sbjct: 993 DYFRLDGSCSVEQRESMCKQFNNASNVRARLFLISTRAGGLGINLVA-ANRVVIFDVSWN 1051 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I R+ + G + ++Y LIA T+++ V +R K +++ Sbjct: 1052 PSHDTQSIFRV-----YRFGQVKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDE 1103 >gi|46137411|ref|XP_390397.1| hypothetical protein FG10221.1 [Gibberella zeae PH-1] Length = 1023 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 44/140 (31%), Gaps = 17/140 (12%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEGKIP-LL 112 +N ++V H L L F + +N + Sbjct: 561 WHSNGDKVLVFSHSVRLLRILHHLFTNTSYTVSYLDGSLSYEVRQEVVDTFNSDPTQFVF 620 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLN+ N +V W+ + R + G R V V+ LI+ Sbjct: 621 LISTKAGGVGLNITS-ANKVVIIDPHWNPS-----YDLQAQDRAYRIGQTRDVEVFRLIS 674 Query: 173 QNTIDELVLQRLRTKSTIQD 192 T++E+V R K + Sbjct: 675 LGTVEEIVYARQIYKQQQAN 694 >gi|291241069|ref|XP_002740438.1| PREDICTED: transcriptional regulator ATRX-like [Saccoglossus kowalevskii] Length = 1981 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 9/122 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + +N+ + L + G+NL N ++ F W Sbjct: 1658 IDYFRMDGSTSAQNRKAFQDLFNDPENLRARLFLISTKAGSLGINLVS-ANRVIIFDASW 1716 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + Q I R+ + G +A F+Y +AQ T++E + +R TK ++ +++ + Sbjct: 1717 NPTHDVQSIFRV-----YRFGQTKACFIYRFLAQGTMEEKIYERQVTKQSLSRRVVDQFQ 1771 Query: 200 KE 201 E Sbjct: 1772 IE 1773 >gi|11870012|gb|AAG40586.1|AF217802_1 xnp/atr-x DNA helicase [Drosophila melanogaster] Length = 1311 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++++ +++N + L + G G+NL N +V F + W+ Sbjct: 962 DYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVA-ANRVVIFDVSWN 1020 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I R+ + G + ++Y LIA T+++ V +R K +++ Sbjct: 1021 PSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDE 1072 >gi|21356675|ref|NP_651398.1| XNP, isoform B [Drosophila melanogaster] gi|24650076|ref|NP_733107.1| XNP, isoform A [Drosophila melanogaster] gi|17366808|sp|Q9GQN5|ATRX_DROME RecName: Full=Transcriptional regulator ATRX homolog; AltName: Full=ATP-dependent helicase XNP; AltName: Full=X-linked nuclear protein; AltName: Full=d-xnp; AltName: Full=dXNP gi|7301343|gb|AAF56471.1| XNP, isoform A [Drosophila melanogaster] gi|16198065|gb|AAL13821.1| LD28477p [Drosophila melanogaster] gi|23172300|gb|AAN14055.1| XNP, isoform B [Drosophila melanogaster] gi|220947590|gb|ACL86338.1| XNP-PA [synthetic construct] Length = 1311 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++++ +++N + L + G G+NL N +V F + W+ Sbjct: 962 DYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVA-ANRVVIFDVSWN 1020 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I R+ + G + ++Y LIA T+++ V +R K +++ Sbjct: 1021 PSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDE 1072 >gi|156547006|ref|XP_001600490.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 843 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 61/157 (38%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDP 98 + K K L+ ++ + + +++ F L L++ + + Sbjct: 646 LKSGKFKKLDELLPQLKNDGHRVLIFSQFTMILDILEEYLTIRGHRYLRLDGQTPVMERQ 705 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I E+ + +I + + G G+NL + ++ + ++ ++ R Sbjct: 706 DLIDEYTEDSEIFIFLLSTRAGGLGINLTS-ADTVIIHDIDFNP-----YNDKQAGDRCH 759 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V + L+ ++TI+E + + + K ++ + Sbjct: 760 RVGQTKPVRIIRLLGKDTIEEGMYKITQEKLNLEQKI 796 >gi|96979867|ref|YP_611073.1| global transactivator [Antheraea pernyi nucleopolyhedrovirus] gi|94983400|gb|ABF50340.1| global transactivator [Antheraea pernyi nucleopolyhedrovirus] Length = 495 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 66/223 (29%), Gaps = 35/223 (15%) Query: 3 QYHKFQRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKE-------- 50 Y + E A + Q+ +KE Sbjct: 264 VYDCLKSESQRAFDEAVAGAPRGMQAVLWLLCRLRQMCCHPALAKCADLFKEQAHIFEPG 323 Query: 51 VHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKD 97 K + +++ + +++ + L + + + ++ Sbjct: 324 YKSSKCRRALELVQRVLDSPDDKVVLVSQWVEFLHIVAEQLRALSVPVLLYTGRLRTEER 383 Query: 98 PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +N + +L G GLNL GGN LV W+ + +E R Sbjct: 384 AAVENRFNDADSPYRVLLMSIKCGGVGLNLT-GGNHLVLLEPHWNPQ-----VELQAQGR 437 Query: 156 QRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ VY ++ +N+++ + R K D + + Sbjct: 438 IHRLGQRKRAHVYKMLVDEENSVERYMKTRQDKKLEFVDKVFD 480 >gi|331088936|ref|ZP_08337845.1| hypothetical protein HMPREF1025_01428 [Lachnospiraceae bacterium 3_1_46FAA] gi|330406534|gb|EGG86042.1| hypothetical protein HMPREF1025_01428 [Lachnospiraceae bacterium 3_1_46FAA] Length = 557 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 69/204 (33%), Gaps = 22/204 (10%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ + L+ +++ N S T++ QL G + ++ K E I Sbjct: 350 LYRDIKQGIVEQLED-ILQSVNPLSCTLRLRQLTGGLF----TEDNPKLDRIKDMLEEEI 404 Query: 63 IEKANAAPIIVAYHFNSDLARLQ--------KAFPQGRTLDKDPCTIQEWN-EGKIPLLF 113 I N I+ + S + T ++ + + + + L Sbjct: 405 I--PNGNKAIIFSQWESITSVYLEALRAYNPIYITGKVTPEERQKEVDRFQTDPECKLAI 462 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GL L + + F W+ R + G V V ++A+ Sbjct: 463 GTIGAMGTGLTL-NKASYVFFVDKLWN-----SGENAQAEDRAHRIGTAGTVNVISMVAK 516 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 ++DE V + L + D +++ Sbjct: 517 GSVDEGVEEYLLENKELFDRVVDG 540 >gi|302784062|ref|XP_002973803.1| hypothetical protein SELMODRAFT_414152 [Selaginella moellendorffii] gi|300158135|gb|EFJ24758.1| hypothetical protein SELMODRAFT_414152 [Selaginella moellendorffii] Length = 338 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 63/175 (36%), Gaps = 17/175 (9%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR--------- 92 + + K++AL +E + +V + + L L+ + Sbjct: 162 FRVNVEEQWKESSKVEALLQQLETLRESKSVVFSQWTAFLDLLEIPLKRKNFRFVRLDGT 221 Query: 93 -TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + K ++++ N + ++ + G GLNL + WW+ +Q I R Sbjct: 222 LSQHKREQVLKDFSNIPDVAVMLISLKAGGVGLNLTA-ASNAFLMDPWWNPAVEEQAIMR 280 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I + G + V + I +++++E + Q K + L + + + Sbjct: 281 I-----HRIGQTQNVSIKRFIVKDSVEERMQQVQARKQRLIAGALTDEEVRSARI 330 >gi|71029212|ref|XP_764249.1| DNA-dependent helicase [Theileria parva strain Muguga] gi|68351203|gb|EAN31966.1| DNA-dependent helicase, putative [Theileria parva] Length = 2026 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 8/156 (5%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 E D K+ +V+I + + + I+ Sbjct: 1011 QNNGVSVEAEDSKVYMHKVLIFTQFQLVLDELETYCINRGWKYMRLDGSTNKLIRELDIR 1070 Query: 103 EWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+N + G G+NL N +V + W+ I+ + R + G Sbjct: 1071 EFNSNNSNYFVYLISTRAGGLGINLTA-ANHVVLYDEDWNP-----FIDLQAIDRAHRIG 1124 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 KR V ++ LI++ T++E + K + L+L+ Sbjct: 1125 QKRNVHIWKLISEWTVEERMALIREKKLQLDKLILH 1160 >gi|221053540|ref|XP_002258144.1| SNF2-family protein [Plasmodium knowlesi strain H] gi|193807977|emb|CAQ38681.1| SNF2-family protein, putative [Plasmodium knowlesi strain H] Length = 1048 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 7/113 (6%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ + I+ + N I + + G GLNL N ++ W+ Sbjct: 917 NQIYVRLDGSTNTIERQKIIKRFSNNDNIFIFLLTTKAGGVGLNL-IAANHVILMDQDWN 975 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 +R R + G K V++Y L +NTI+E +L+ + K + Sbjct: 976 P-----HNDRQAEDRVHRLGQKNEVYIYRLCCKNTIEETILRCCKAKLHLDQA 1023 >gi|164662775|ref|XP_001732509.1| hypothetical protein MGL_0284 [Malassezia globosa CBS 7966] gi|159106412|gb|EDP45295.1| hypothetical protein MGL_0284 [Malassezia globosa CBS 7966] Length = 1129 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 54/152 (35%), Gaps = 17/152 (11%) Query: 64 EKANAAPIIVAYHFNSDL-----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N ++ + L ++ + ++ + + KI + Sbjct: 969 PRPNPIKSVIFSQWTRMLAKVKEALLHAGIGFRQLDGTMKREHREGAMSEFQQDPKIEVF 1028 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G +W+ QQ ++RI + G KR + + I Sbjct: 1029 LVSLRAGGFGLNLVAGC-RAYLLDPYWNPAVEQQGLDRI-----HRLGQKRPIVMTKFIM 1082 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 Q +I+E +L+ + K + + + T H Sbjct: 1083 QRSIEEKLLELQKRKLELASQVGRRTDRRTDH 1114 >gi|195573901|ref|XP_002104930.1| GD18194 [Drosophila simulans] gi|194200857|gb|EDX14433.1| GD18194 [Drosophila simulans] Length = 1098 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++++ +++N + L + G G+NL N +V F + W+ Sbjct: 962 DYFRLDGSCSVEQREAMCKQFNNVTNLRARLFLISTRAGGLGINLVA-ANRVVIFDVSWN 1020 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I R+ + G + ++Y LIA T+++ V +R K +++ Sbjct: 1021 PSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDE 1072 >gi|148273304|ref|YP_001222865.1| putative DNA helicase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831234|emb|CAN02189.1| putative DNA helicase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 711 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 62/196 (31%), Gaps = 20/196 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQ----LANGAVYYDEEKHWKEVHDEKIKALEV 61 + + D N + + Q LA K V K + Sbjct: 505 RLVAQSELDEAKAQKTGENVFTMVRRIGQAKAVLAADYAAQLARSVGKVVFFAKHVDVMD 564 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 E A + + D + + N+ ++ ++ + G Sbjct: 565 QAEATFAKRELKSVSIRGDQS----------PAARQHAIDSFQNDPEVKVVVCSLTAAGV 614 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ N+++ W E+ + R + G + V + +IA TID + Sbjct: 615 GLNLQAASNVVLAELSWTSAEQT------QAIDRVHRIGQEEPVTAWRIIAAQTIDAKIA 668 Query: 182 QRLRTKSTIQDLLLNA 197 + + +K+ + L+ Sbjct: 669 ELIDSKAGLAARALDG 684 >gi|303271765|ref|XP_003055244.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226463218|gb|EEH60496.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 481 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 K +Q + G+ +L + GLNL N ++ WW+ IE + Sbjct: 281 PKRAAIVQAFRRGEATVLLVSLKAASLGLNL-NCANNVILVDPWWNAA-----IEDQAID 334 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V LI +++ + K I + L Sbjct: 335 RCHRIGQTKEVKVTRLIVSESVELRIQALQERKRAIFNAALGD 377 Score = 34.7 bits (78), Expect = 7.3, Method: Composition-based stats. Identities = 4/48 (8%), Positives = 10/48 (20%), Gaps = 5/48 (10%) Query: 4 YHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEK 46 Y + + +K Q + + E + Sbjct: 94 YRALEEGTQALFDKYVKRGWKRNYMHILVLLLKLRQACDHPLLLKEAR 141 >gi|68490054|ref|XP_711148.1| hypothetical protein CaO19.6291 [Candida albicans SC5314] gi|68490091|ref|XP_711130.1| hypothetical protein CaO19.13670 [Candida albicans SC5314] gi|46432408|gb|EAK91891.1| hypothetical protein CaO19.13670 [Candida albicans SC5314] gi|46432427|gb|EAK91909.1| hypothetical protein CaO19.6291 [Candida albicans SC5314] Length = 972 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 57/163 (34%), Gaps = 20/163 (12%) Query: 46 KHWKEVHDEK---IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGR 92 K + K + + I +++ F L L++ Sbjct: 807 GDEKFLDSGKVIELGKILQHIIDNKEEKVLIFSLFTQVLDILERVLSIFNYKFARLDGNT 866 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + I +N + KI + + G G+NL N ++ F ++ ++ Sbjct: 867 PVQERQDLIDLFNQDDKIHIFLISTKAGGVGINLVA-ANHVIMFDQSFNP-----HEDKQ 920 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + V VY LI+ TI++ + R K + + + Sbjct: 921 AEDRAHRVGQTKEVKVYRLISDETIEKNIFSVARNKLELDEKI 963 >gi|326382680|ref|ZP_08204371.1| ATP-dependent DNA helicase [Gordonia neofelifaecis NRRL B-59395] gi|326198799|gb|EGD55982.1| ATP-dependent DNA helicase [Gordonia neofelifaecis NRRL B-59395] Length = 571 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 60/208 (28%), Gaps = 24/208 (11%) Query: 2 KQYHKFQRELY-CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---HDEKIK 57 + Y + + + Q+ N E K+ Sbjct: 339 RIYDAILDDAENAGFGTGMARRGAILTALTRLKQVCNHPGLTGSEAVTAGDLSGRSGKLD 398 Query: 58 ALEVIIEKA--NAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEW 104 I+E N +P +V + L G + + + ++ Sbjct: 399 VCTDIVESNLENDSPTVVFTQYRQTGELLAAHLGQVLGTDVPFLHGGLSRAERDRIVDDY 458 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G +L A + G GL L + +V + WW+ +E R + G R Sbjct: 459 QAGAGCGVLIASLKAAGTGLTLTRAAD-VVHYDRWWNPA-----VEAQATDRVHRIGQDR 512 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 V V L T++E + KS + Sbjct: 513 IVTVTTLTTAGTLEEHIAAMHDRKSALD 540 >gi|299116533|emb|CBN74721.1| SNF2-related domain-containing protein [Ectocarpus siliculosus] Length = 1075 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 63/162 (38%), Gaps = 23/162 (14%) Query: 53 DEKIKALEVII----EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDP 98 K+ LE ++ + ++VA +F S L G T + Sbjct: 756 SGKMTVLEALLKAVRREYPGDKVVVASNFTSALDVLETLAERNAWGFLRLDGGTTTNARQ 815 Query: 99 CTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +N + L + + G GLNL G N +V F W+ + + R Sbjct: 816 NLVDRFNRASPEDLFLFYLSTKAGGVGLNL-VGANRIVLFDSDWNPAT-----DDQAMAR 869 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V +Y L++ T++E + QR K + DL+ ++ Sbjct: 870 VWRLGQTKEVSMYRLLSTGTLEESIFQRQIFKGALYDLIHDS 911 >gi|325095596|gb|EGC48906.1| transcription factor [Ajellomyces capsulatus H88] Length = 929 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 20/163 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA-----------F 88 +E E KI+AL I+ +A +V + S L ++ Sbjct: 746 NEIDINPETTSSKIQALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLVRNGITFARID 805 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + +D N+ +L A C GLNL N ++ WW I Sbjct: 806 GKMSSAKRDAAMNALSNDSNCTVLLASLNVCSVGLNLVA-ANQVILADSWWAPA-----I 859 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 E V R + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 860 EDQAVDRVYRLGQKRPTTIWRLVMENSIEDRVLDKQKEKRTLM 902 >gi|316975021|gb|EFV58483.1| putative immunoglobulin domain protein [Trichinella spiralis] Length = 858 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 52/125 (41%), Gaps = 10/125 (8%) Query: 77 FNSDLARLQKAFPQGRTLDK-DPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNIL 132 FN + + G T +++N+ + + + G+NL G N + Sbjct: 497 FNYWVPGIDYIRMDGSTNASTRERLAKKFNDETNRRCRVFLLSTKAGSLGINL-IGANRV 555 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V F W+ + + R + G + V++Y LIA+ T++E + QR K ++ Sbjct: 556 VVFDANWNPSH-----DLQAMFRVYRLGQCKPVYIYRLIAKGTMEETIYQRQVVKQSLSC 610 Query: 193 LLLNA 197 +++ Sbjct: 611 RVIDE 615 >gi|224001656|ref|XP_002290500.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973922|gb|EED92252.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1653 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 8/107 (7%) Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + +N P + + G GLNL + ++ F W+ M++ Sbjct: 1135 RKREKRMYMFNAPDSPYFIFLLSTRAGGLGLNL-ATADTVIIFDSDWNP-----MMDLQA 1188 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G ++ V V+ +I Q+ ++E +L R K + +L++ A K Sbjct: 1189 QDRAHRIGQRKDVRVFRIITQSPVEEKILSRATEKLHMNELVVEAGK 1235 >gi|170588595|ref|XP_001899059.1| SNF2 family N-terminal domain containing protein [Brugia malayi] gi|158593272|gb|EDP31867.1| SNF2 family N-terminal domain containing protein [Brugia malayi] Length = 1207 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 14/129 (10%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F T + I +N + I L + G+NL + ++ F W+ Sbjct: 852 YYRFDGSTTATEREKLINRFNQDPNILLFLISTRAGSLGINLVS-ASRVIIFDASWNP-- 908 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL-------LN 196 + V R + G KR +VY LI N+++ + R K+ +Q + ++ Sbjct: 909 ---CHDAQAVCRIYRYGQKRRTYVYRLIMDNSMERAIFSRQIGKNGLQQRVVDDKQMDID 965 Query: 197 ALKKETIHV 205 K+E + Sbjct: 966 ITKREMEQL 974 >gi|253573375|ref|ZP_04850718.1| helicase protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846903|gb|EES74908.1| helicase protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 592 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 64/160 (40%), Gaps = 19/160 (11%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDP 98 + + K + +I + N +IV + + + G K Sbjct: 375 QIKANSKAEKAMELIREMND-KVIVFTEYRATQEYLLKYFRERGMTAVPYRGGMNRGKKD 433 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + G+ ++ A + G G+NLQ+ + ++ F L W+ +Q I R+ + Sbjct: 434 WMMDLFR-GRAQVMIAT-EAGGEGINLQF-CHQMINFDLPWNPMRVEQRIGRV-----HR 485 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G V +Y L + TI+E +L L K + ++++ L Sbjct: 486 LGQTNDVHIYNLSTKGTIEEHILHLLHEKINMFEMVIGHL 525 >gi|255072471|ref|XP_002499910.1| SNF2 super family [Micromonas sp. RCC299] gi|226515172|gb|ACO61168.1| SNF2 super family [Micromonas sp. RCC299] Length = 1201 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 6/118 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 D + L + + ++ G+ +L + GLNL + ++ W Sbjct: 1023 EDAGHAVLRLDGTQRLSQRARVVAKFRRGEAGVLLVSLKAASLGLNL-NCASRVILTDPW 1081 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ IE + R + G R V V L+ ++T++ + K I L Sbjct: 1082 WNAA-----IEDQAIDRCHRIGQTREVKVTRLLIRDTVENRIRDLQERKKAIVAAALG 1134 Score = 38.6 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 6/54 (11%), Positives = 12/54 (22%), Gaps = 5/54 (9%) Query: 4 YHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH 52 Y + G + +K Q + + E + E Sbjct: 744 YRALEERTVTMFDTYVKRGWKANYMHILVLLLKLRQACDHPLLLKEAREQNEPD 797 >gi|27502706|gb|AAH42442.1| Smarcad1 protein [Mus musculus] Length = 836 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 23/195 (11%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAP 70 + + K Q + + + K +AL I+ + Sbjct: 627 LIFEDMEVMTDFELHVLCKQYQ----HINSYQLDMDLILDSGKFRALGCILSELKQKGDR 682 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASC 119 +++ F L L+ + + I E+N + I + + Sbjct: 683 VVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAG 742 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL N+++ + + ++ R + G + V V LI+Q TI+E Sbjct: 743 GLGINLTS-ANVVILHDIDCNP-----YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEES 796 Query: 180 VLQRLRTKSTIQDLL 194 +L+ + K ++ + Sbjct: 797 MLKINQQKLKLEQDM 811 >gi|322500409|emb|CBZ35486.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 736 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN 105 ++++ + + A +I+ F S + +L I+++ Sbjct: 510 LRSIHDMQKNHPADKMIIFSQFTSFMDVISVALDRYNIAFLRIDGTMSLSNRNAVIRQFQ 569 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I ++ A + G GLNL N +V WW+ IE V R + G K+ Sbjct: 570 TSEHIKIVLASKTATGVGLNLTA-ANHVVVVDPWWNPA-----IEEQAVHRCYRIGQKKP 623 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+V I +TI++ + + K D +L A Sbjct: 624 VYVTRFIIADTIEQYCYEICQRKKEFGDAVLRA 656 >gi|116191565|ref|XP_001221595.1| hypothetical protein CHGG_05500 [Chaetomium globosum CBS 148.51] gi|88181413|gb|EAQ88881.1| hypothetical protein CHGG_05500 [Chaetomium globosum CBS 148.51] Length = 982 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 17/150 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN 105 I L + + +V F S L T ++E+ Sbjct: 818 INQLRELRRETPTIKSVVFSQFTSFLSLLEPALARANMHFVRLDGSMTQKARAAVLEEFK 877 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E K +L + G GLNL + WW IE + R + G + Sbjct: 878 ESKKFTILLLSLKAGGVGLNLTS-AKRVYMMDPWWSFA-----IEAQAIDRVHRMGQEDE 931 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V VY I ++++++ +L+ K + L Sbjct: 932 VKVYRFIVKDSVEQRMLKVQDRKKFLATSL 961 Score = 35.1 bits (79), Expect = 6.4, Method: Composition-based stats. Identities = 13/152 (8%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 6 KFQRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 K +R +++ + + ++ ++ Q + + E + A Sbjct: 624 KAKRTFLANVEAGTVMKAFTSIFAQVLRLRQSCCHPILVRNREIAAEEEEAGAAADAAAG 683 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 + + F + G + I++ + P+ P Sbjct: 684 LADDMDLHSLIERFTATTDDTTDTNAFGAHVLGQ---IRDEAINECPICAEEPMVDQTVT 740 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +H + + R R Sbjct: 741 GCWHSACKNCLLDYIKHQSDHHE-VPRCFHCR 771 >gi|255726892|ref|XP_002548372.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240134296|gb|EER33851.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 1066 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 19/161 (11%) Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTL 94 K + KI L+ I++K I++ F L L+K G + Sbjct: 884 DEKYLDSGKIIELKKILDKTTKKGEKILIFSLFTQVLDILEKVLSLFDLKFVRLDGGTKV 943 Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D+ TI +N + IP+ + G G+NL N ++ F ++ + ++ Sbjct: 944 DERQDTIDIFNEDSTIPIFLLSTKAGGFGINLVA-ANNVIIFDQSFNPHD-----DKQAE 997 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G K+ V V+ +I T+++ +L K + + Sbjct: 998 DRAHRVGQKKEVTVFKMITNKTVEKNMLLLAENKLALDKKI 1038 >gi|221505782|gb|EEE31427.1| helicase, putative [Toxoplasma gondii VEG] Length = 1345 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 68/228 (29%), Gaps = 57/228 (25%) Query: 28 KTVKCLQLANGAVYYD---------------------------EEKHWKEVHDEKIKALE 60 ++ + N + ++ KI A++ Sbjct: 411 LFMQLRKCCNHPALFHLGASCTSAVSVGTRDSEETRSDSVAEGDDAESLLRDSSKIAAVD 470 Query: 61 VII--EKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGK 108 I+ ++V + L ++ + + I ++ Sbjct: 471 AILSFYLPRQEKVVVFSFSTAMLDLVEDYLDEKGIVSARLDGRMGDGERRAAIAAFSAQP 530 Query: 109 IP---------------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + G+GL L + ++ VF + +ER + Sbjct: 531 SENARQSPQGSHEACAAVFLVSVRAGGYGLTLSHCASVCVFLEGG---GDGNPQVERQAI 587 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V V LI ++T++E++ R R K + +L+ + + Sbjct: 588 ARLYRQGQTKKVKVIRLITRSTVEEVMYWRGRQKLKLVADVLSEDEND 635 >gi|47209419|emb|CAF93109.1| unnamed protein product [Tetraodon nigroviridis] Length = 1232 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/270 (11%), Positives = 69/270 (25%), Gaps = 73/270 (27%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------------- 42 K Y F + + Q E + + + N + Sbjct: 246 KYYKAFLLKDHGAFQNEQRNKTRLLNILINLRKCVNHPYMFEGETRWELPGPVEATVTPV 305 Query: 43 ----------------DEEKHWKEVHDEKIKALEVIIE----KANAAPIIVAYHFNSDLA 82 E K+ L+ ++ + +++ L Sbjct: 306 KMRMFCDVFLGVEPEPFEMGEHLIEASGKLSLLDNLLTFLLKEQVGHRVLLFSQMTRMLD 365 Query: 83 RLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 +Q ++ ++ ++ I + G GLNL + + Sbjct: 366 IVQDYMEYRGYSYERLDGSIRGEERNLAVKNFSSNDIFAFLLSTKAGGVGLNLTA-ADTV 424 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQ-----------------------AGFKRAVFVYY 169 +F ++ Q R Q + R V V Sbjct: 425 IFIDSDFNPHNDLQAAARCHRIGQDRWCSGTTVVTTWAGPQPDVLTITTVTHSRPVKVIR 484 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 LI ++T++E++ R +K + ++ + Sbjct: 485 LIGRDTVEEIMYCRAASKLNLTKTVMEDGR 514 >gi|116196848|ref|XP_001224236.1| hypothetical protein CHGG_05022 [Chaetomium globosum CBS 148.51] gi|88180935|gb|EAQ88403.1| hypothetical protein CHGG_05022 [Chaetomium globosum CBS 148.51] Length = 819 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 57/161 (35%), Gaps = 19/161 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 + +EE E K +AL I++ K + + +I+ + S + + Sbjct: 652 HSAEDEEESLDPETKSSKTEALLKILQATLKNDGSKVIIFSQWTSMKYVQTRCRYSRIST 711 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ A + C GLNL + +V WW IE V Sbjct: 712 T----------TPATRIMPASLSVCSVGLNLVS-ADTVVLADSWWAPA-----IEDQAVD 755 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R V+ L+ + T++E VL K + + Sbjct: 756 RVHRLGQTRPTTVWRLVMEGTVEERVLDIQGEKRELVNKAF 796 >gi|328354133|emb|CCA40530.1| hypothetical protein PP7435_Chr4-0362 [Pichia pastoris CBS 7435] Length = 689 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 17/156 (10%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--------- 86 + E++ K + L I+++ A I+ F LA L+ Sbjct: 533 CSQCKSLSEQQTPPLERSAKSERLLEILKRDPARKTIIFSQFTKLLATLKPFLTKNGFKC 592 Query: 87 --AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +D + + +L GLNL N +V + WW+ + Sbjct: 593 VLYEGTMTRAMRDTTLKEFNENPETTVLLCSLKCGAIGLNLT-IANRVVIYDPWWNPQ-- 649 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 +E + R + G + V VY LI +++++E + Sbjct: 650 ---VEDQAIDRVYRFGQTKEVDVYRLIIKDSVEENI 682 >gi|302408887|ref|XP_003002278.1| DNA repair protein RAD5 [Verticillium albo-atrum VaMs.102] gi|261359199|gb|EEY21627.1| DNA repair protein RAD5 [Verticillium albo-atrum VaMs.102] Length = 1130 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 17/150 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN 105 I AL + + +V F S L ++ A + + E+ Sbjct: 619 ISALRELRREHPRMKSVVFSQFTSFLTLIEPALAKSNIKFLRLDGTMAQKARAAVLNEFQ 678 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +L + G GLNL + WW IE + R + G + Sbjct: 679 EANQFTILLLSLRAGGVGLNLTT-AKRVYMMDPWWSFA-----IEAQAIDRVHRMGQEDE 732 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V VY I + +++E +L+ K + L Sbjct: 733 VKVYRFIVEQSVEERMLKVQERKKFLATSL 762 >gi|158290917|ref|XP_312449.4| AGAP002490-PA [Anopheles gambiae str. PEST] gi|157018127|gb|EAA08205.4| AGAP002490-PA [Anopheles gambiae str. PEST] Length = 881 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 9/120 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 L ++D + +N+ + L + G G+NL N +V F + Sbjct: 481 LGLDYFRLDGSTSIDNRNDACKVFNDESNTRARLFLISTRAGGLGINLVA-ANRVVIFDV 539 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + + R + G + ++Y IA T++E + +R TK I +++ Sbjct: 540 SWNPSH-----DIQSIFRVYRFGQSKPCYIYRFIAMGTMEEKIYERQVTKQAISKRVIDE 594 >gi|145603372|ref|XP_369370.2| hypothetical protein MGG_06094 [Magnaporthe oryzae 70-15] gi|145011615|gb|EDJ96271.1| hypothetical protein MGG_06094 [Magnaporthe oryzae 70-15] Length = 763 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 18/173 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL------- 94 +E D +K L+ + K +++ +I+ + S L +Q+ + T Sbjct: 582 DMDESAGSSKTDALLKILDGTLLKNSSSKVIIFSQWTSFLNVIQRQLEEHTTYGYTRIDG 641 Query: 95 -----DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +D + + +L A C GLNL + ++ WW IE Sbjct: 642 TMKPVARDDAMRKLETDPDTRILLASLGVCSVGLNLVT-ADTVILADSWWAPA-----IE 695 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G R V+ L+ ++T++E VL K + K+T Sbjct: 696 DQAIDRVHRLGQTRPTTVWRLVMEDTVEERVLDVQSEKRDLVSKAFQEKGKKT 748 >gi|289679708|ref|ZP_06500598.1| SNF2-related:helicase, C-terminal:SWIM Zn-finger [Pseudomonas syringae pv. syringae FF5] Length = 97 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ + WW+ E R + G + VFVY +IA+ T++E + + R KS Sbjct: 5 ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMIARGTVEEKIQRLQREKS 59 Query: 189 TIQDLLLNA 197 + +L+ Sbjct: 60 ALASGVLDG 68 >gi|196003014|ref|XP_002111374.1| hypothetical protein TRIADDRAFT_55311 [Trichoplax adhaerens] gi|190585273|gb|EDV25341.1| hypothetical protein TRIADDRAFT_55311 [Trichoplax adhaerens] Length = 954 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 9/116 (7%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + I +N + L + G+NL N +V + W+ Sbjct: 758 YFRIDGSVPSHERSRLIDLFNSPDNNSVWLFLISTRAGNLGINLVA-ANRVVIYDSAWNP 816 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G K+ ++Y L+ NT++ ++ +R K + +++ Sbjct: 817 -----CYDNQAAFRIYRYGQKKPCYIYRLVGSNTMEHVIYKRQIRKQGLSRRIIDE 867 >gi|297742194|emb|CBI33981.3| unnamed protein product [Vitis vinifera] Length = 554 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 62/128 (48%), Gaps = 8/128 (6%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNIL 132 YHF+ + + R + + +I +N+ ++ +L A +C G++L G + + Sbjct: 382 YHFHWIVGKEVLYMDGQRDVKQRQSSINTFNDPASQVRVLLASTKACSEGISL-VGASRV 440 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + W+ +ER ++R + G ++ V++Y+L+ T++E R K + + Sbjct: 441 ILLDVVWNPS-----VERQAISRAYRLGQRKVVYIYHLLTSGTMEEEKYCRQAKKDRLSE 495 Query: 193 LLLNALKK 200 L+ ++ K Sbjct: 496 LVFSSKDK 503 >gi|10438729|dbj|BAB15325.1| unnamed protein product [Homo sapiens] Length = 757 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 57/163 (34%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTI 101 K+ ++ ++ K A +++ L L+ Q R + I Sbjct: 6 GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI 65 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + + G G+NL + + F W+ + + R + Sbjct: 66 DRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQN-----DLQAQARCHRI 119 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 120 GQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 162 >gi|311899146|dbj|BAJ31554.1| hypothetical protein KSE_57820 [Kitasatospora setae KM-6054] Length = 613 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 65/232 (28%), Gaps = 39/232 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD-------- 53 + Y + + + ++ L A E E Sbjct: 347 EIYEALKGNFTARAEASRGDFDALGRAMLRLLMAATSPALLVEGGSRYEPLSYRVPPLQP 406 Query: 54 -------------------EKIKALEVIIEKAN--AAPIIVAYHFN-------SDLARLQ 85 K I+ +V F LA + Sbjct: 407 EPGDSLYSLLQNLPSYELSPKYHETLEIVAANAALGRKTLVWTTFVRSLTTLQEMLAPYR 466 Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 A G T D+ + + +L ++PA+ G G++L + V+ + Sbjct: 467 PAVVHGGTADRAEELRRFREDPDCLVLLSNPATLGEGISLHQVCHDAVYVDRDFMAGRFL 526 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q ++RI R V L A TIDE+V RL+ K +L+ Sbjct: 527 QSLDRIHRLGLAPGTETR---VTILAATGTIDEVVALRLQQKLDFMGRILDD 575 >gi|124481796|gb|AAI33116.1| LOC553504 protein [Danio rerio] Length = 1105 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 74/177 (41%), Gaps = 12/177 (6%) Query: 31 KCLQLA----NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 +C Q A + +Y + K +++ + I + ++ + + ++ L+ Sbjct: 424 RCKQAAFEAMSDPMYSGKMKVMQKLLNHFIAKKDKVLLFSLSTKLLDVLESYCMAEGLEY 483 Query: 87 AFPQGRTLDKDP-CTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 G T KD ++E+N + + L + G GLN G N++V F W+ Sbjct: 484 HRLDGNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNF-IGANVVVLFDPTWNPAND 542 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q I+R+ + G R V V+ LI+ T++E++ R K +Q ++ Sbjct: 543 LQAIDRV-----YRIGQCRDVTVFRLISLGTVEEIIYLRQVYKQQLQSSVIGQENAR 594 >gi|302667167|ref|XP_003025174.1| hypothetical protein TRV_00656 [Trichophyton verrucosum HKI 0517] gi|291189264|gb|EFE44563.1| hypothetical protein TRV_00656 [Trichophyton verrucosum HKI 0517] Length = 1020 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 AN ++V H L LQ F + + + +N + + + Sbjct: 620 HANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIVNAFNSDPRQFVFL 679 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G R V V+ L++ Sbjct: 680 ISTKAGGVGLNITS-ANKVVVVDPNWNPA-----YDLQAQDRAYRIGQLRDVEVFRLVSA 733 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 734 GTIEEIVYARQIYKQQQAN 752 >gi|146091759|ref|XP_001470113.1| DNA repair protein [Leishmania infantum] gi|134084907|emb|CAM69305.1| putative DNA repair protein [Leishmania infantum JPCM5] Length = 736 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN 105 ++++ + + A +I+ F S + +L I+++ Sbjct: 510 LRSIHDMQKNHPADKMIIFSQFTSFMDVISVALDRYNIAFLRIDGTMSLSNRNAVIRQFQ 569 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I ++ A + G GLNL N +V WW+ IE V R + G K+ Sbjct: 570 TSEHIKIVLASKTATGVGLNLTA-ANHVVVVDPWWNPA-----IEEQAVHRCYRIGQKKP 623 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+V I +TI++ + + K D +L A Sbjct: 624 VYVTRFIIADTIEQYCYEICQRKKEFGDAVLRA 656 >gi|228904537|ref|ZP_04068620.1| hypothetical protein bthur0014_56750 [Bacillus thuringiensis IBL 4222] gi|228855101|gb|EEM99677.1| hypothetical protein bthur0014_56750 [Bacillus thuringiensis IBL 4222] Length = 413 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 20/203 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y++F++ ++ E + A+K + QLA ++ K++ ++ Sbjct: 229 KMYNEFKKHHIIEIGEELLIGDTPAAKKLYLRQLAGSY------------NEHKLQYIKD 276 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE N II +A + T++ D + + + + + Sbjct: 277 LIESTNDRIIIFYNFKKEYMALVDLIERPIATINGDIKDLSAYEKHDNSVTLIQYQAGAM 336 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ I+ F + R + G KR F YYL+ +I+ +L Sbjct: 337 GLNLQKANKIVYFTLTDKS------ELFEQSKKRTHRIGQKRPCFYYYLLTDGSIEWRML 390 Query: 182 QRLRTKSTIQDLLLNALKKETIH 204 L+ + D L K+E ++ Sbjct: 391 DVLKERRDYTDALFE--KEEDVN 411 >gi|94264307|ref|ZP_01288100.1| SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box helicase-like [delta proteobacterium MLMS-1] gi|93455273|gb|EAT05483.1| SNF2-related:Helicase-like:SWIM Zn-finger:DEAD/DEAH box helicase-like [delta proteobacterium MLMS-1] Length = 1022 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 18/184 (9%) Query: 32 CLQ--LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF- 88 Q +A A +++ +++ + + + +V + +++ Sbjct: 585 LQQARMACDAAGLVDKESVGSPKIDELAQILDEVCLQSGLKAVVFSQWELMTRMVEQRLR 644 Query: 89 ---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 G K ++ + L+F + G GLNLQ ++LV + W Sbjct: 645 RLGIGYVRLHGGVPTAKRGDLLERFRSDDSVLVFLSTDAGGVGLNLQS-ASVLVNLDVPW 703 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +Q RI + G V + ++A N+ +E VL ++ K + D ++ Sbjct: 704 NPAVLEQRNGRI-----HRLGQPNKVQIITMVAANSYEEQVLSLVQNKQALFDQVIAEDA 758 Query: 200 KETI 203 E + Sbjct: 759 SEDV 762 >gi|330924634|ref|XP_003300716.1| hypothetical protein PTT_12049 [Pyrenophora teres f. teres 0-1] gi|311325001|gb|EFQ91184.1| hypothetical protein PTT_12049 [Pyrenophora teres f. teres 0-1] Length = 1117 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++D + I ++ + G GLNL N + ++ Q ++R Sbjct: 996 MTRENRDKSMQALREDSSIRVMLVSIGAGGLGLNLTT-ANKVFMMEPQFNPAAEAQAVDR 1054 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + + G R V + I + +E +L+ K + D+ ++ +K Sbjct: 1055 V-----HRLGQDREVTIKRFIMNGSFEEKMLELQNKKRDLADMTMSRERK 1099 >gi|156550927|ref|XP_001603100.1| PREDICTED: similar to transcriptional regulator ATRX (X-linked helicase II) [Nasonia vitripennis] Length = 1283 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 9/120 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 L + + + +N + L + G G+NL N ++ F Sbjct: 895 LGLDYFRLDGSTSAENRSAWCKIFNNPKNTRARLFLISTRAGGLGINLTA-ANRVIIFDA 953 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q I RI + G K+ +VY +A T++E + R TK ++ +++ Sbjct: 954 SWNPSHDVQSIFRI-----YRFGQKKPCYVYRFLAAGTMEEKIYNRQVTKLSLACRVVDE 1008 >gi|118089602|ref|XP_420305.2| PREDICTED: similar to putative DNA dependent ATPase and helicase [Gallus gallus] Length = 2533 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 69/200 (34%), Gaps = 24/200 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI-----I 63 ++ D E +E + L++A +E V + + +L++I + Sbjct: 2045 KDFVTDADAEVLEHSGKMVLLFEILRMA------EELGDKVLVFSQSLISLDLIEDFLEL 2098 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQEWNEGKI---PLLFAHP 116 + + + T +E+N+ L Sbjct: 2099 ANREKTDKEKPPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIIST 2158 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G+NL N ++ F W+ + + R + G + VFVY +AQ T+ Sbjct: 2159 KAGSLGINLVA-ANRVIIFDASWNPS-----YDIQSIFRVYRFGQSKPVFVYRFLAQGTM 2212 Query: 177 DELVLQRLRTKSTIQDLLLN 196 ++ + R TK ++ +++ Sbjct: 2213 EDKIYDRQVTKQSLSFRVVD 2232 >gi|39977089|ref|XP_369932.1| hypothetical protein MGG_06447 [Magnaporthe oryzae 70-15] gi|145016135|gb|EDK00625.1| hypothetical protein MGG_06447 [Magnaporthe oryzae 70-15] Length = 1592 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 18/161 (11%) Query: 48 WKEVHDEKIKALEVIIEKAN--AAPIIVAY----------HFNSDLARLQKAFPQGRTLD 95 H KI L I+++A +++ + R + Sbjct: 934 HNLDHSYKITVLTRILDEAKRVGDKVLIFSSRIPVLNFLENLMKMQKRPYSRLDGETKIS 993 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +N + + G GLN+Q G N +V W Q + R Sbjct: 994 TRQASVANFNANNDEVYLISTNAGGVGLNIQ-GANRVVMMDFQWQPANEQ-----QAIGR 1047 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V+VY+LI T + + K+ + +++ Sbjct: 1048 AYRIGQTKPVYVYWLIVGGTYEPKLHAAAIFKTQLASRVVD 1088 >gi|154340309|ref|XP_001566111.1| DNA repair protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063430|emb|CAM39609.1| putative DNA repair protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 736 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN 105 ++++ + + A +I+ F S + +L I+++ Sbjct: 510 LRSIHDMQKNHPADKMIIFSQFTSFMDVISVSLDRYNIAFLRIDGTMSLSNRNAVIRQFQ 569 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I ++ A + G GLNL N ++ WW+ IE V R + G K+ Sbjct: 570 TSEHIKIVLASKTATGVGLNLTA-ANHVIVVDPWWNPA-----IEEQAVHRCYRIGQKKP 623 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+V I +TI++ + + K D +L A Sbjct: 624 VYVTRFIIADTIEQYCYEICQRKKEFGDAVLRA 656 >gi|2443887|gb|AAB71480.1| Similar to transcription factor gb|Z46606|1658307 and others [Arabidopsis thaliana] Length = 1272 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 17/138 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE- 106 + K IV + L L+ + + +Q++N Sbjct: 1120 MSVDVPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL 1179 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ ++ + GLN+ + ++ LWW+ E + R + G R V Sbjct: 1180 PEVTVMIMSLKAASLGLNMVAACH-VLMLDLWWNPTT-----EDQAIDRAHRIGQTRPVT 1233 Query: 167 VYYLIAQNTIDELVLQRL 184 V ++T+++ +L Sbjct: 1234 VVRFTVKDTVEDRILALQ 1251 >gi|300175571|emb|CBK20882.2| unnamed protein product [Blastocystis hominis] Length = 571 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 73/233 (31%), Gaps = 46/233 (19%) Query: 2 KQYH---KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE---- 54 + Y + QR + G+ + + L E Sbjct: 259 QLYEKLIELQRGSLAEHGGD--AGQLTLTFLHALRLLCVHPSLIRESVQSTSALSSLLPI 316 Query: 55 ----------------KIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR--- 92 K++A+E+++ I+V + L L + Sbjct: 317 LDADDQNQRDFTSQSVKMEAVELLLASILSHTDEQILVISSYTQILDYLGSFCDSKKWGY 376 Query: 93 -------TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + + +N L + G GLN+ G + +V W+ Sbjct: 377 FRLDGQTDVAQRQSLVNSFNHRYTSKRLFILSARAGGVGLNIT-GASRVVMLEPAWNPA- 434 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I+ + R + G R VFVY L +I+E++LQR K I D+ ++ Sbjct: 435 ----IDLQSIARAWRFGQTRRVFVYRLFVAGSIEEVMLQRQLLKKAIADVAVD 483 >gi|209945960|gb|ACI97211.1| okra [Drosophila melanogaster] Length = 168 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 6/98 (6%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIER 150 ++ K + +N+ + +S G L G N L F W+ + Sbjct: 76 MSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN-----DE 130 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + R + G K+ ++Y L+A +I+E QR K Sbjct: 131 QAMARVWRDGQKKPCYIYRLVASGSIEEKXXQRQTHKK 168 >gi|162455821|ref|YP_001618188.1| SNF2 family helicase [Sorangium cellulosum 'So ce 56'] gi|161166403|emb|CAN97708.1| helicase, Snf2 family [Sorangium cellulosum 'So ce 56'] Length = 944 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 34/212 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 ++E L +K Q N + ++ K+ LE +I Sbjct: 489 RALRKEELDRL----------MMMLMKARQACN--ALELCDPRRRKKASPKLDELEALIA 536 Query: 65 K---ANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEWNEGKIPL 111 + +IV + L D+ P + + + Sbjct: 537 EVTAQPRNKVIVFSEWVGMLELASERLDRLRVGHAMLHGDVPTDRRPALLDRFRDDPAVR 596 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G GLNLQ + +V L W+ R + G R+V V YL Sbjct: 597 VLLSTDAGGVGLNLQA-ASYVVHLDLPWNPARLD-----QRTARAHRLGQGRSVSVTYLC 650 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 A+ I+ + L K + L+ +L+ ++ Sbjct: 651 AEEGIERGIEGILSEKRKV---LVASLRADST 679 >gi|115450111|ref|NP_001048656.1| Os03g0101700 [Oryza sativa Japonica Group] gi|108705687|gb|ABF93482.1| SNF2P, putative, expressed [Oryza sativa Japonica Group] gi|113547127|dbj|BAF10570.1| Os03g0101700 [Oryza sativa Japonica Group] gi|215694686|dbj|BAG89877.1| unnamed protein product [Oryza sativa Japonica Group] Length = 842 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 79/230 (34%), Gaps = 40/230 (17%) Query: 2 KQY-HKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------EKHWKEV 51 K Y ++EL G + + ++ + ++ + E Sbjct: 256 KLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEPEPYVEGEHLVQ 315 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------------ 97 K+ L++I++K + +++ L LQ + + Sbjct: 316 ASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFA 375 Query: 98 ----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +++ N+ + + G GLNL G + ++F+ W+ + Sbjct: 376 AIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNL-IGADTVIFYEQDWNPQA---- 430 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ + R + G V L++Q TI+E++++R K + ++ Sbjct: 431 -DKQALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGE 479 >gi|327300653|ref|XP_003235019.1| SNF2 family helicase [Trichophyton rubrum CBS 118892] gi|326462371|gb|EGD87824.1| SNF2 family helicase [Trichophyton rubrum CBS 118892] Length = 920 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 17/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 +V + S L ++ + + +D + + + ++ A Sbjct: 765 GTKTVVFSQWTSFLDLIEPHLVLYNINFARIDGKMNSAKRDAAMGKFSRDSECTVMLASL 824 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 C GLNL N +V WW IE V R + G R ++ L+ +N+I Sbjct: 825 NVCSVGLNLVA-ANQVVLADSWWAPA-----IEDQAVDRVYRLGQTRPTTIWRLVMENSI 878 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 ++ VL + K + Sbjct: 879 EDRVLDIQKEKRELMSTAFQE 899 Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats. Identities = 6/48 (12%), Positives = 15/48 (31%), Gaps = 6/48 (12%) Query: 4 YHKFQREL------YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE 45 Y F+ E + +G+ + ++ Q+ N + Sbjct: 593 YEMFEAEAKGVFMDFQSNKGKKTTYSHVLEVLLRLRQVCNHWKLCHDR 640 >gi|325116690|emb|CBZ52243.1| hypothetical protein NCLIV_020290 [Neospora caninum Liverpool] Length = 677 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 20/154 (12%) Query: 53 DEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPC 99 K++ LE ++ ++ +++ +F S L ++ + Sbjct: 520 HSKMQFLENLLLSIRSSSDDKVVIVSNFTSTLDNIEIFMRAKGYSFLRLDGSTAVRDRTG 579 Query: 100 TIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +NE + + G GLNL G N L+ W+ QQ + RI + Sbjct: 580 LVKTFNESEQCFAFLLSSKAGGVGLNL-IGANRLILLDPDWNPANDQQALARIW-----R 633 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 G VF+Y L+ TI+E +LQR K+T+ Sbjct: 634 PGQVNPVFIYRLVGARTIEEKILQRQAYKTTLAQ 667 >gi|330800474|ref|XP_003288261.1| hypothetical protein DICPUDRAFT_97966 [Dictyostelium purpureum] gi|325081717|gb|EGC35223.1| hypothetical protein DICPUDRAFT_97966 [Dictyostelium purpureum] Length = 1718 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Query: 97 DPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + + L + G NL GG ++ L W+ + +R V Sbjct: 1505 RQRMINRFNEEDNHLKLFIISTKAGSLGTNLT-GGTRVIILDLSWNP-----VHDRQAVY 1558 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G K+ V+VY L+ T +E + R+ K + ++A + Sbjct: 1559 RCYRIGQKKTVYVYTLVMAGTGEERIYNRMIHKQALAKRAVDAENPKI 1606 >gi|148666356|gb|EDK98772.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1`, isoform CRA_b [Mus musculus] Length = 866 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 66/195 (33%), Gaps = 23/195 (11%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAP 70 + + K Q + + + K +AL I+ + Sbjct: 657 LIFEDMEVMTDFELHVLCKQYQ----HINSYQLDMDLILDSGKFRALGCILSELKQKGDR 712 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASC 119 +++ F L L+ + + I E+N + I + + Sbjct: 713 VVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAG 772 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL N+++ + + ++ R + G + V V LI+Q TI+E Sbjct: 773 GLGINLTS-ANVVILHDIDCNP-----YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEES 826 Query: 180 VLQRLRTKSTIQDLL 194 +L+ + K ++ + Sbjct: 827 MLKINQQKLKLEQDM 841 >gi|4204312|gb|AAD10693.1| Hypothetical protein [Arabidopsis thaliana] Length = 874 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 68/220 (30%), Gaps = 55/220 (25%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKE---------------------------------- 50 +K Q++N + Sbjct: 475 VLPCLMKLQQISNHLELIKPNPKDEPEKQKKDAEFVSTVFGTDIDLLGGISASKSFMDLS 534 Query: 51 --VHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDK--------- 96 H K++ALE ++ + I++ + L + +G + + Sbjct: 535 DVKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNL 594 Query: 97 DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N + + G GLNL N +V F W+ + R Sbjct: 595 RQSLVDDFNASPSKQVFLISTKAGGLGLNLVS-ANRVVIFDPNWNPSH-----DLQAQDR 648 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V V+ L++ +++ELV R K + ++ + Sbjct: 649 SFRYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAV 688 >gi|327284355|ref|XP_003226904.1| PREDICTED: transcriptional regulator ATRX-like [Anolis carolinensis] Length = 2334 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 71/199 (35%), Gaps = 23/199 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE---- 64 ++ + E +E + L++A +E V + + +L++I + Sbjct: 1843 KDFVTEADAEVLEHSGKMVLLFEILRMA------EELGDKVLVFSQSLISLDLIEDFLEL 1896 Query: 65 ----KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPA 117 K PI+ T +E+N+ L Sbjct: 1897 ASRDKEEGKPIVYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDVTNVRGRLFIISTK 1956 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G+NL N ++ F W+ + + R + G +AVFVY +AQ T++ Sbjct: 1957 AGSLGINLVA-ANRVIIFDASWNPS-----YDIQSIFRVYRFGQTKAVFVYRFLAQGTME 2010 Query: 178 ELVLQRLRTKSTIQDLLLN 196 + + R TK ++ +++ Sbjct: 2011 DKIYDRQVTKQSLSFRVVD 2029 >gi|242018945|ref|XP_002429929.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212514975|gb|EEB17191.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 1234 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 65/188 (34%), Gaps = 6/188 (3%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 ++ + + I A + L++ + A I+ + N Sbjct: 908 KILKEEEFTEIRASGKLVLLFQILKICHQAGDKLLVFSQYLTTLNLIEYFLRFVNDNNNK 967 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 ++ + N ++ LL + G G+NL Sbjct: 968 NDECNTWVTGVDYYRIDGTTNSQSRFDYCKKFNDKNNKRLRLLLISTRAGGLGINLVS-A 1026 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 N ++ F + W+ Q I R+ + G ++ ++Y +++ T++E + QR TK + Sbjct: 1027 NRVIIFDVSWNPSHDLQSIFRV-----YRFGQRKTCYIYRFLSEATMEEKIYQRQVTKLS 1081 Query: 190 IQDLLLNA 197 + +++ Sbjct: 1082 LAHRIIDE 1089 >gi|322493268|emb|CBZ28553.1| DNA repair protein-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 909 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 21/168 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKA---------- 87 + + +W K + L I ++V F + L Q Sbjct: 693 HLDLTDMNNWSLQLSSKTQYLIDTIRSLPVEDKVVVFSTFLTYLRCAQHWLQAAGVSCAL 752 Query: 88 FPQGRTLDKDPCTIQEWNE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + T+ + ++ +++ G +L A +SCG GLNL N W+ Sbjct: 753 YSGSMTMKQRQSLLELFHDAARPGSPRVLLATISSCGVGLNLT-CANHCFLMEPSWNPGT 811 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 E + R + G + V LIA+ TI++ + Q K + Sbjct: 812 -----EEQALNRIYRIGQTKPVTFTKLIAEGTIEQNISQLCERKRALS 854 >gi|189199742|ref|XP_001936208.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983307|gb|EDU48795.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1026 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 19/154 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLF 113 + A +V F S L ++ A + + + + +L Sbjct: 871 EEPNAKTVVFSQFTSFLDLIEPALTRDHIPFLRFDGSISQKVRAQILTEFTTSPRPYVLL 930 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL N + WW +E + R + G +R V V Q Sbjct: 931 LSLRAGGVGLNLT-CANKVFMMDPWWSFA-----VEAQAIDRVHRMGQEREVKVVRFCVQ 984 Query: 174 NTIDELVLQRLRTKSTIQDL--LLNALKKETIHV 205 +I+E +L+ K I +++ +K + Sbjct: 985 GSIEEKMLRIQERKKFIASSLGMMSDEEKRVQRI 1018 >gi|86136167|ref|ZP_01054746.1| probable swi/snf family helicase 2 [Roseobacter sp. MED193] gi|85827041|gb|EAQ47237.1| probable swi/snf family helicase 2 [Roseobacter sp. MED193] Length = 603 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 62/215 (28%), Gaps = 33/215 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK----------EVHD 53 Y + + T++ + + ++ + + Sbjct: 378 YRDVRDATMEKYP-----VAGALVATLQLQLVCAHPWLRNSGENEECAALVPAADMPLVT 432 Query: 54 EKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCT 100 K++ ++ +A N +IV FN L++A + Sbjct: 433 PKMERAVDLLREAFANGRKVIVFALFNRIGDLLKQACSHLPDTHWGAINGSTPQEDRQTI 492 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + + +++ F+ W+ E R + G Sbjct: 493 IDLFAAHEGSACLVLNPKAAGAGLNITAATVVIHFTPVWNPAL-----EAQASARAHRRG 547 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V VY L +T++E+++ R K+ + + + Sbjct: 548 QTEPVTVYRLFYLDTVEEVMIDRSAWKNDLANETV 582 >gi|320163536|gb|EFW40435.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 1077 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 46/125 (36%), Gaps = 11/125 (8%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ +DLAR Q+A I ++ + G GLNL N +V Sbjct: 938 NWTADLARQQQANANSTDKKSKHPLI-----TGSRVMLLSLLAGGVGLNLVA-ANHVVIA 991 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ Q +R + G V V+ LI + T++E V K + ++ Sbjct: 992 DGHWNPALEDQACDR-----AYRVGQPLKVTVHRLICKGTVEERVAALQAKKRALSKDII 1046 Query: 196 NALKK 200 + + Sbjct: 1047 QSARA 1051 >gi|302419287|ref|XP_003007474.1| ATP-dependent helicase RIS1 [Verticillium albo-atrum VaMs.102] gi|261353125|gb|EEY15553.1| ATP-dependent helicase RIS1 [Verticillium albo-atrum VaMs.102] Length = 1131 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 61/173 (35%), Gaps = 26/173 (15%) Query: 53 DEKIKALEVIIEKANAA-----PIIVAYHFN-------------SDLARLQKAFPQGRTL 94 K++A +I++ ++ + +L + G Sbjct: 954 SAKVQACVDLIKQIRDESDGRAKTLIFSQWTMFIDLMEIALQKDEELKHVGHVRYDGDMN 1013 Query: 95 DKDP--CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 KD + + L+ + GLNL + ++ +W+ Q ++R+ Sbjct: 1014 MKDRFKSAQRFRENPRTKLMLISLKAGNAGLNL-VQASRVIILDPFWNPFVEMQAVDRV- 1071 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G + V VY ++ ++++++ +++ K + L+ + + + Sbjct: 1072 ----HRIGQQNEVKVYRILVKDSVEDRIMEIQTKKREAIEAALDGKASKGMGL 1120 >gi|164659175|ref|XP_001730712.1| hypothetical protein MGL_2166 [Malassezia globosa CBS 7966] gi|159104609|gb|EDP43498.1| hypothetical protein MGL_2166 [Malassezia globosa CBS 7966] Length = 838 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 17/138 (12%) Query: 70 PIIVAYHFNSDL-----------ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 +V F + L R+ + +D I + + Sbjct: 687 KSLVFSQFVNFLDLIAFRLQRAGFRICRLEGNMTPDARDRTIRLFMENPGITVFLVSLKA 746 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q ++RI + G R + V +I +N+I+ Sbjct: 747 GGVALNLTE-ASRVYLMDPWWNPAVEVQAMDRI-----HRLGQHRPIVVKRMIIENSIES 800 Query: 179 LVLQRLRTKSTIQDLLLN 196 +++ KS + D L Sbjct: 801 RIIELQNKKSAMVDAALG 818 >gi|297797399|ref|XP_002866584.1| hypothetical protein ARALYDRAFT_496587 [Arabidopsis lyrata subsp. lyrata] gi|297312419|gb|EFH42843.1| hypothetical protein ARALYDRAFT_496587 [Arabidopsis lyrata subsp. lyrata] Length = 1097 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 54/161 (33%), Gaps = 19/161 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ + +++ +++ L +Q T Sbjct: 738 SCKLSFIMSLLDNLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLKT 797 Query: 101 IQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+ EG + P+ G GL L + ++ W+ Q ++R + Sbjct: 798 VEEFQEGHVAPIFLLTSQVGGLGLTLTK-ADRVIVVDPAWNPSTDNQSVDR-----AYRI 851 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G + V VY L+ T++E + ++ K + ++ Sbjct: 852 GQTKDVIVYRLMTSATVEEKIYRKQVYKGGLFKTATEHKEQ 892 >gi|121713600|ref|XP_001274411.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Aspergillus clavatus NRRL 1] gi|119402564|gb|EAW12985.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Aspergillus clavatus NRRL 1] Length = 657 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 60/182 (32%), Gaps = 32/182 (17%) Query: 32 CLQLANGAVYYDEE-------KHWKEVHDEKIKALEVIIE---KANAAPIIVAYHF---- 77 Q + + K AL+ +++ + +I+ +F Sbjct: 481 LAQCSIHPYLLTNAIPDPYILGDHVFNNSGKFIALQKLLKHYVEVENTKVIIFSNFEQAL 540 Query: 78 --NSDLARLQKAFPQGRTLDK---------DPCTIQ-EWNEGKIPLLFAHPASCGHGLNL 125 DL + + + + N+ + + G GLNL Sbjct: 541 NLCEDLVMIMQGTSPAFEYLRLDGRTTSPWRKLMVYLFQNDPSYMIFLLSIRAAGEGLNL 600 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 ++++F W+ + + + +R + G R V +Y L + T++E + QRL Sbjct: 601 TS-SSVVIFLDEDWNPQ-----VMKQAESRAHRIGQSRPVRIYKLRSSGTVEEQMSQRLA 654 Query: 186 TK 187 K Sbjct: 655 KK 656 >gi|324508390|gb|ADY43542.1| Transcription termination factor 2 [Ascaris suum] Length = 693 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 64/183 (34%), Gaps = 20/183 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR 92 +A+G E K+ AL +++A ++ + S L ++ Q Sbjct: 469 IADGHQGNVEYLFEAPFQSAKLVALFERLDQALALGDKCVIVSQWTSLLDIVEYHLKQRD 528 Query: 93 TLD----------KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ +N G ++ G GGN L L W+ Sbjct: 529 VQYTSITGKVLTKDRQPRVESFNRVGGGARVMLLSLT-AGGVGLNLVGGNHLFLIDLHWN 587 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 QQ +RI + G + VF++ +I TI+E VL ++K + +L Sbjct: 588 PALEQQACDRI-----YRMGQTKEVFIHKIICLGTIEERVLTLQQSKMALAKGVLEGAAS 642 Query: 201 ETI 203 + + Sbjct: 643 KKL 645 >gi|164428480|ref|XP_965771.2| hypothetical protein NCU00631 [Neurospora crassa OR74A] gi|157072163|gb|EAA36535.2| conserved hypothetical protein [Neurospora crassa OR74A] Length = 1044 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 16/150 (10%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE 106 +E D K + + ++ANA+ A D + Sbjct: 875 KPEEKEDWKPTVFDQLRKEANASRNQDA----RDRLLQYTWDHW------QDSAKAFVED 924 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L + GLNL + ++ +W+ IE V R + G +R V Sbjct: 925 PDVKVLLVSLKAGNAGLNLT-VASRVIVCDPFWNP-----FIEDQAVDRAYRIGQQREVH 978 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY ++ Q TI++ +++ K I + L+ Sbjct: 979 VYKILVQETIEDRIIELQNLKRNIVETALD 1008 Score = 35.9 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 5/30 (16%), Positives = 8/30 (26%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKE 50 N ++ Q D E + K Sbjct: 695 NYSNILVLLLRLRQACCHPHLTDFEANPKN 724 >gi|1881825|gb|AAB49515.1| Rhp16 [Schizosaccharomyces pombe] Length = 854 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 17/147 (11%) Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPAS 118 IV F S L + + G T TI+ + N+ I + + Sbjct: 703 KSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSNDINITIFLVSLKA 762 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q ++RI + G K + V L +N+I+ Sbjct: 763 GGVALNLTE-ASQVFMMDPWWNGAVQWQAMDRI-----HRIGQKGRIKVITLCIENSIES 816 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 +++ K+ + ++ +K + Sbjct: 817 KIIELQEKKAQMIHATIDQDEKALNQL 843 >gi|310800518|gb|EFQ35411.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1150 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 17/144 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGKIP- 110 + ++ +V F S L+ ++ + E+ E K Sbjct: 992 LRKEQPRVKSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEFQESKTFT 1051 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL + WW +E + R + G V VY Sbjct: 1052 VLLLSLRAGGVGLNLTS-AKRVFMMDPWWSFA-----VEAQAIDRVHRMGQDEEVKVYRF 1105 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 I + +++E +L+ K I L Sbjct: 1106 IVKESVEERMLRVQDRKKFIATSL 1129 >gi|299740345|ref|XP_001838866.2| hypothetical protein CC1G_09243 [Coprinopsis cinerea okayama7#130] gi|298404200|gb|EAU82981.2| hypothetical protein CC1G_09243 [Coprinopsis cinerea okayama7#130] Length = 671 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 21/158 (13%) Query: 50 EVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTL 94 + K+K + +IEK I+V + + L K Sbjct: 488 FLPSTKMKYMMELIEKSFKSRPDEKILVVSQWTACLTLVSDYLAEKGIAHVKYQGDMDRN 547 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +D ++ K ++ G GLNL N ++ L W + +E Sbjct: 548 KRDQAVRVFMSKDKARVMLMSLKCGGVGLNLTR-ANNVISLDLAWS-----RAVESQAWD 601 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V L+ NT+++ +L K ++ D Sbjct: 602 RVHRLGQTRNVNVQRLVIANTVEDRILALQERKQSLAD 639 >gi|221057846|ref|XP_002261431.1| SNF2 family protein [Plasmodium knowlesi strain H] gi|194247436|emb|CAQ40836.1| SNF2 family protein, putative [Plasmodium knowlesi strain H] Length = 2872 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 8/129 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + I+E+N + + + G G+NL N ++ Sbjct: 1218 YCKYRCWKYMRLDGSTNKLIRELDIREFNLNDSIYFIYLISTRAGGLGINLTA-ANHVIM 1276 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ I+ + R + G KR V V+ L+ + T++E + R K + L+ Sbjct: 1277 YDEDWNP-----FIDLQAIDRAHRIGQKREVNVWKLMTEWTVEERMAFRREQKLKLDKLV 1331 Query: 195 LNALKKETI 203 + E + Sbjct: 1332 VQTQDDEDM 1340 >gi|85540719|sp|Q7S1P9|RAD5_NEUCR RecName: Full=DNA repair protein rad-5 Length = 1222 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN 105 I L + ++ +V F S L+ + A + + + E+ Sbjct: 1056 ISHLRTLRQEHPKMKSLVISQFTSFLSLISSALTRHKISFLRLDGSMSQKARAAVLTEFQ 1115 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +L + G GLNL + WW +E + R + G + Sbjct: 1116 STNKFCVLLLSLKAGGVGLNLTS-AKRVYMMDPWWSFA-----VEAQAIDRVHRMGQEDE 1169 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDL--LLNALKKETIHV 205 V VY I + +++ +L+ K I +++ +K+ + Sbjct: 1170 VRVYRFIVKQSVEMRMLRVQERKKFIATSLGMMSDEEKKMQRI 1212 Score = 34.7 bits (78), Expect = 8.0, Method: Composition-based stats. Identities = 14/152 (9%), Positives = 39/152 (25%), Gaps = 5/152 (3%) Query: 8 QRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 +R L+ ++Q + + ++ ++ Q V ++ + + + A Sbjct: 860 KRTLFDNMQAGTVMKAFTSIFAQILRLRQSCCHPVLVRNQEILADEEEANMAADVAAGLA 919 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 + + F + K + NE P+ P Sbjct: 920 DDMDLQTLIERFTATTDDASKTNNNFGAHVLRQIRDEAVNE--CPICAEEPMIDQAVTGC 977 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + + + R R+ Sbjct: 978 WHSACKKCLLDYIKHQTDRNE-VPRCFQCREH 1008 >gi|195344342|ref|XP_002038747.1| GM10445 [Drosophila sechellia] gi|194133768|gb|EDW55284.1| GM10445 [Drosophila sechellia] Length = 547 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 7/118 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 DL+ F T + ++++N +L + G GLNL N ++ L Sbjct: 410 QDLSWETLDFNGQLTAKEREIVVRDFNANNDKRVLLLSLTAGGVGLNL-NVANHMLIVDL 468 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + ER R + G + F+Y + Q+T+++ + K + ++L Sbjct: 469 HWNPQL-----ERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEMAKVVL 521 Score = 37.8 bits (86), Expect = 0.99, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 11/41 (26%), Gaps = 1/41 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 + Y +F + GE I ++ Q Sbjct: 218 EIYERFLK-SLGYNPGEKILGIYILVLLLRLRQFCCHPGLM 257 >gi|302803682|ref|XP_002983594.1| hypothetical protein SELMODRAFT_180307 [Selaginella moellendorffii] gi|300148837|gb|EFJ15495.1| hypothetical protein SELMODRAFT_180307 [Selaginella moellendorffii] Length = 364 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 62/170 (36%), Gaps = 17/170 (10%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDK 96 + K++AL +E + +V + + L L+ + + K Sbjct: 193 EEQWKESSKVEALLQQLETLRESKSVVFSQWTAFLDLLEIPLKRKNVRFVRLDGTLSQHK 252 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++++ N + ++ + G GLNL + WW+ +Q I RI Sbjct: 253 REQVLKDFSNIPDVAVMLISLKAGGVGLNLTA-ASNAFLMDPWWNPAVEEQAIMRI---- 307 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G + V + I +++++E + Q K + L + + + Sbjct: 308 -HRIGQTQNVSIKRFIVKDSVEERMQQVQARKQRLIAGALTDEEVRSARI 356 >gi|17862980|gb|AAL39967.1| SD07188p [Drosophila melanogaster] Length = 655 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++++ +++N + L + G G+NL N +V F + W+ Sbjct: 306 DYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVA-ANRVVIFDVSWN 364 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I R+ + G + ++Y LIA T+++ V +R K +++ Sbjct: 365 PSHDTQSIFRV-----YRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVIDE 416 >gi|194744636|ref|XP_001954799.1| GF16563 [Drosophila ananassae] gi|190627836|gb|EDV43360.1| GF16563 [Drosophila ananassae] Length = 884 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 17/176 (9%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN---------SDL 81 K LQL + + I+ LE ++ I+V+ +DL Sbjct: 689 KALQLMSPQNPIFDFSRSSAKLKLVIEKLEELLNGTGDKIIVVSQWITFIGVIRQRLNDL 748 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 F + + ++++N +L ++ G GLNL N ++ L W Sbjct: 749 CWSTLDFTGQLSAKERELVLRDFNNPNNDKRVLLLSLSAGGVGLNL-NVANHMLLVDLHW 807 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + + +Q +RI + G K+ F+Y + Q T+++ + K I ++L Sbjct: 808 NPQLQKQAQDRI-----YRYGQKKPTFIYRFMCQETVEQRIKALQDYKLEIAKVVL 858 >gi|126643947|ref|XP_001388153.1| SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Cryptosporidium parvum Iowa II] gi|126117230|gb|EAZ51330.1| SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Cryptosporidium parvum Iowa II] Length = 807 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 77/211 (36%), Gaps = 30/211 (14%) Query: 2 KQYHKFQ-RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 K Y + + + L I + L + N + + + K+K Sbjct: 599 KGYSRIKVEQYITQLCDYEIHQ-----LVSRLLIVKNSPLLERFRIDDELIINGSCKLKK 653 Query: 59 LEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGR-------------TLDKDPCTIQ 102 + II+ N ++ H L +++ + + I+ Sbjct: 654 MNEIIQSTVIENKEKCLIFCHHTMLLDIIEEYIKIKYNIPDFYLRLDGTTPILERQNMIE 713 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ ++PL + G GLNL + ++ L ++ + IE+ R + G Sbjct: 714 KFQTTQVPLFLLSTKAAGQGLNLT-VASSVIMMDLDYNPQ-----IEKQAEDRVHRIGQS 767 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + V ++ L+ ++TI+E + ++K T+ + Sbjct: 768 KQVKIFKLVCKDTIEENIFNCCQSKLTLDNA 798 >gi|332028347|gb|EGI68394.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Acromyrmex echinatior] Length = 845 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 64/161 (39%), Gaps = 19/161 (11%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K+K L+ I+ + + +++ F L L++ + + I Sbjct: 646 GKLKELDKILPQLKTDGHRVLIFSQFTMVLDILEEYLTIRGQTFLRLDGSTPVTERQTLI 705 Query: 102 QEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + I + + G G+NL + ++ + ++ ++ R + G Sbjct: 706 NKYTEDPSIFIFLLSTRAGGLGINLTA-ADTVILHDIDFNP-----YNDKQAEDRCHRVG 759 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K+ V + L+++ TI+E + + + K ++ + + +E Sbjct: 760 QKKPVSIIRLLSEGTIEEGMYEIAQEKLHLEQQITGVITEE 800 >gi|326477646|gb|EGE01656.1| DNA excision repair protein [Trichophyton equinum CBS 127.97] Length = 1019 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 AN ++V H L LQ F + + + +N + + + Sbjct: 620 HANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIVNAFNSDPRQFVFL 679 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G R V V+ L++ Sbjct: 680 ISTKAGGVGLNITS-ANKVVVVDPNWNPA-----YDLQAQDRAYRIGQLRDVEVFRLVSA 733 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 734 GTIEEIVYARQIYKQQQAN 752 >gi|326473181|gb|EGD97190.1| DNA excision repair protein [Trichophyton tonsurans CBS 112818] Length = 1019 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 AN ++V H L LQ F + + + +N + + + Sbjct: 620 HANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIVNAFNSDPRQFVFL 679 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G R V V+ L++ Sbjct: 680 ISTKAGGVGLNITS-ANKVVVVDPNWNPA-----YDLQAQDRAYRIGQLRDVEVFRLVSA 733 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 734 GTIEEIVYARQIYKQQQAN 752 >gi|148744739|gb|AAI42882.1| Smarca5 protein [Danio rerio] Length = 534 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 48/117 (41%), Gaps = 8/117 (6%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLE 142 ++ +I +NE + G G+NL ++++ + W+ + Sbjct: 8 YCRLDGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINL-ATADVVIIYDSDWNPQ 66 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 ++ + R + G K+ V V+ I NT++E +++R K + +++ + Sbjct: 67 -----VDLQAMDRAHRIGQKKQVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 118 >gi|42561667|ref|NP_171871.2| SWI2 (SWITCH 2); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|332189485|gb|AEE27606.1| switch 2 [Arabidopsis thaliana] Length = 862 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 68/220 (30%), Gaps = 55/220 (25%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKE---------------------------------- 50 +K Q++N + Sbjct: 463 VLPCLMKLQQISNHLELIKPNPKDEPEKQKKDAEFVSTVFGTDIDLLGGISASKSFMDLS 522 Query: 51 --VHDEKIKALEVII--EKANAAPIIVAYHFNSDLAR-LQKAFPQGRTLDK--------- 96 H K++ALE ++ + I++ + L + +G + + Sbjct: 523 DVKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNL 582 Query: 97 DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++N + + G GLNL N +V F W+ + R Sbjct: 583 RQSLVDDFNASPSKQVFLISTKAGGLGLNLVS-ANRVVIFDPNWNPSH-----DLQAQDR 636 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G KR V V+ L++ +++ELV R K + ++ + Sbjct: 637 SFRYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAV 676 >gi|327296351|ref|XP_003232870.1| DNA excision repair protein [Trichophyton rubrum CBS 118892] gi|326465181|gb|EGD90634.1| DNA excision repair protein [Trichophyton rubrum CBS 118892] Length = 1019 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 AN ++V H L LQ F + + + +N + + + Sbjct: 620 HANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIVNAFNSDPRQFVFL 679 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G R V V+ L++ Sbjct: 680 ISTKAGGVGLNITS-ANKVVVVDPNWNPA-----YDLQAQDRAYRIGQLRDVEVFRLVSA 733 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 734 GTIEEIVYARQIYKQQQAN 752 >gi|330917877|ref|XP_003297996.1| hypothetical protein PTT_08573 [Pyrenophora teres f. teres 0-1] gi|311329044|gb|EFQ93908.1| hypothetical protein PTT_08573 [Pyrenophora teres f. teres 0-1] Length = 1069 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 56/161 (34%), Gaps = 19/161 (11%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-----------FNSDLARLQKAFPQGRT 93 + + K+ + +N +++ H F+ D + ++ G Sbjct: 638 QSQREFCGKWKVLRRLLDFWHSNGDKVLIFSHSVRLLRLLRGLFDVDGTKYNFSYLDGSM 697 Query: 94 LDK-DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + ++N + + + G GLN+ N +V W+ + Sbjct: 698 KYEDRSQAVADFNADPNQFVFLISTKAGGVGLNITS-ANKVVVMDPHWNPA-----YDLQ 751 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ L++ TI+E+V R K + Sbjct: 752 AQDRAYRIGQTRNVEVFRLVSSGTIEEVVYARQIYKQQQAN 792 >gi|310794269|gb|EFQ29730.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1053 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 17/156 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 + L + + I+ F+S L ++ + + Sbjct: 887 VHELHKLRSDNASHKSIIFSQFSSMLQLIEWRLRRAGITTVMLDGSMNPAQRQASINHFM 946 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G LNL + + WW+ Q +R + G R Sbjct: 947 TKTDCECFLVSLKAGGVALNLTE-ASRVFIVDPWWNPAAEWQSADRC-----HRIGQTRP 1000 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + L +++++ ++ K+ + + +NA K Sbjct: 1001 CTITRLCIEDSVESRMVLIQEKKTNMINSTVNADDK 1036 >gi|302406098|ref|XP_003000885.1| 5-aminolevulinate synthase [Verticillium albo-atrum VaMs.102] gi|261360143|gb|EEY22571.1| 5-aminolevulinate synthase [Verticillium albo-atrum VaMs.102] Length = 1673 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 60/170 (35%), Gaps = 10/170 (5%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA--YHFNSDLARLQK 86 +C L N + K + DE K E ++ + + P I F R Sbjct: 1162 LNRCRDL-NDIGLSWKVKVLIAILDECRKHKEKVLIFSQSIPTIDWLSTLFQQ-QQRPYS 1219 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ +NEG + + G GLN+ G + +V F ++ Q Sbjct: 1220 RLTGDTLPSIRQSMVKNFNEGDNEIFVISTQAGGQGLNIT-GASRVVIFDFRFNPIAEQ- 1277 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + V VY ++ T ++ + + K + +++ Sbjct: 1278 ----QAIGRAYRIGQSKPVVVYRFVSGGTYEQHLYNKAVWKMQLASRVVD 1323 >gi|156398438|ref|XP_001638195.1| predicted protein [Nematostella vectensis] gi|156225314|gb|EDO46132.1| predicted protein [Nematostella vectensis] Length = 614 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 61/167 (36%), Gaps = 17/167 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG---------- 91 + + + K+ + + + + +++ + L L+ Sbjct: 381 FQTLSNPEYCGKMKVLDKLLRMFEKDKCKVLLFSYSTELLNILENYVIGRGLVFSRLDGQ 440 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++E+N I + + G GLN G N+++ F W+ + Sbjct: 441 TSPAQRMRVVREFNGNRDIFICLVSTKAGGLGLNFT-GANVVIIFDPTWNPSN-----DL 494 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G +R V V LI+ TI+E++ R K + + ++ Sbjct: 495 QAQDRAYRIGQRRDVQVLRLISSGTIEEMMYLRQIYKQQMANTAISG 541 >gi|312127313|ref|YP_003992187.1| SNF2-like protein [Caldicellulosiruptor hydrothermalis 108] gi|311777332|gb|ADQ06818.1| SNF2-related protein [Caldicellulosiruptor hydrothermalis 108] Length = 939 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 78/222 (35%), Gaps = 33/222 (14%) Query: 1 MKQYHKFQ-RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD-----E 54 M Y K ++ D + + K + + + +++ H K ++ Sbjct: 698 MTDYQKMLYSKIIADFKKSENKKQILLDTLHKLIYVCDFPEISNDDIHKKNINKVVKECA 757 Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCT 100 K+K L I+++ ++ F A L Q + Sbjct: 758 KVKKLIEILDEIKQKDEKALIFTKFKPVQAMLSSIIQQRYGLFVNILNGEIRDSSRRKQI 817 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I +N + +L + G GLN+ N ++ ++ W+ + E R + Sbjct: 818 IDNFNQSAEFNVLILNTQVGGIGLNITS-ANHVIHYTREWNPAK-----EDQATDRVYRI 871 Query: 160 GFKRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLLL 195 G ++ V VYYLI + TIDE + L+ K + ++ Sbjct: 872 GQQKDVNVYYLITTAPDLVKKTIDEHIHDLLQAKKELFKEVI 913 >gi|149408770|ref|XP_001508504.1| PREDICTED: similar to helicase-like transcription factor [Ornithorhynchus anatinus] Length = 884 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 59/171 (34%), Gaps = 23/171 (13%) Query: 46 KHWKEVHDEKIKALE----VIIEKANAAPIIVAYHFNSDLARLQKAFPQG---------- 91 + + KI AL + +K ++ F + L+ ++K + Sbjct: 700 TDQEWISSSKINALMHSLIDLRKKNPQTKSLIVSQFTTFLSLIEKPLKESGFVFTRLDGS 759 Query: 92 RTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 760 MPQKKRVESIQCFQSTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 818 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +R + G K+ V + I +++++E +L+ K + K Sbjct: 819 DRC-----HRLGQKQEVVITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 864 >gi|17561718|ref|NP_503548.1| hypothetical protein F59A7.8 [Caenorhabditis elegans] gi|2291218|gb|AAB65339.1| Hypothetical protein F59A7.8 [Caenorhabditis elegans] Length = 518 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 8/112 (7%) Query: 95 DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +N +G + + G GLNL GGN L+ L W+ QQ +RI Sbjct: 392 KDRQERVDSFNQEKGGAQDMLLSLTAGGVGLNL-IGGNHLIMVDLHWNPALEQQACDRI- 449 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G K+ V ++ LI + TI++ V+ K + +L ++ Sbjct: 450 ----YRMGQKKEVHIHRLIVKETIEQRVMSLQEKKLALAASVLEGSATRGMN 497 >gi|330982227|gb|EGH80330.1| SNF2-related:helicase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 93 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ + WW+ E R + G + VFVY +IA+ T++E + + R KS Sbjct: 1 ADTVIHYDPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMIARGTVEEKIQRLQREKS 55 Query: 189 TIQDLLLNA 197 + +L+ Sbjct: 56 ALASGVLDG 64 >gi|302834898|ref|XP_002949011.1| hypothetical protein VOLCADRAFT_43161 [Volvox carteri f. nagariensis] gi|300265756|gb|EFJ49946.1| hypothetical protein VOLCADRAFT_43161 [Volvox carteri f. nagariensis] Length = 347 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 72/221 (32%), Gaps = 33/221 (14%) Query: 2 KQYHKF-QRELYCDLQGENIEAFNSASKTV-KCLQLANGAVYYDEEK---HWKEVHDEK- 55 +QY + +R G+ + + + A +EE+ H Sbjct: 133 EQYRQISERGQLMAASGKVRMYTRALANLSVHLRKAAIHPYLLEEERGEYTHTHTHSGLG 192 Query: 56 -------IKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDK 96 + L+ ++ K +++ L + Sbjct: 193 PGGERGEMAMLDYLLPKLAATGHRVLLFSQMTRALDLVEEFLELRGLPYLRLDGSTRTED 252 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 P + +N + + G GLNLQ + ++ W+ +++ Sbjct: 253 RPQLLTAFNSPNSPYRVFLLSTRAGGMGLNLQS-ADTVIMLDSDWNPA-----MDQQAED 306 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G R+V V L++ T++E++L+R K + + ++ Sbjct: 307 RAHRLGQTRSVLVLVLVSCRTLEEVMLERAGAKRGLGEAVI 347 >gi|58259855|ref|XP_567340.1| DNA repair protein RAD5 [Cryptococcus neoformans var. neoformans JEC21] gi|134116468|ref|XP_773188.1| hypothetical protein CNBJ1830 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255809|gb|EAL18541.1| hypothetical protein CNBJ1830 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229390|gb|AAW45823.1| DNA repair protein RAD5, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1359 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 67/196 (34%), Gaps = 19/196 (9%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIVAYHFN 78 E N ++K + + + +E + + IV + Sbjct: 1157 EKLNLSTKMQFLHDELLRFSKKNPHSAHYDPFSLEQDDVEEMDAEGKPVVTKSIVFSQWT 1216 Query: 79 SDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 + L R+ + T D+ I + + +L + G GLNL Sbjct: 1217 TMLDRIADMLDETNIRYARLDGTMTRDERSKAIDALKFKKNVEVLLVSTRAGGVGLNLT- 1275 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + +W+ Q I+RI + G R V L+ +++I+E + + + K Sbjct: 1276 VASRCYLVDPYWNPSVESQAIDRI-----HRMGQTRPVVAIKLMIKDSIEEKLDKIQKKK 1330 Query: 188 STIQDLLLNALKKETI 203 + + L L + ++ + Sbjct: 1331 AELAQLSLKNMSRKEL 1346 >gi|85090635|ref|XP_958511.1| DNA repair protein RAD5 [Neurospora crassa OR74A] gi|28919880|gb|EAA29275.1| DNA repair protein RAD5 [Neurospora crassa OR74A] gi|118496044|dbj|BAF37538.1| DNA repair and recombination protein MUS41 [Neurospora crassa] Length = 1175 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 19/163 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN 105 I L + ++ +V F S L+ + A + + + E+ Sbjct: 1009 ISHLRTLRQEHPKMKSLVISQFTSFLSLISSALTRHKISFLRLDGSMSQKARAAVLTEFQ 1068 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +L + G GLNL + WW +E + R + G + Sbjct: 1069 STNKFCVLLLSLKAGGVGLNLTS-AKRVYMMDPWWSFA-----VEAQAIDRVHRMGQEDE 1122 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDL--LLNALKKETIHV 205 V VY I + +++ +L+ K I +++ +K+ + Sbjct: 1123 VRVYRFIVKQSVEMRMLRVQERKKFIATSLGMMSDEEKKMQRI 1165 Score = 34.7 bits (78), Expect = 8.6, Method: Composition-based stats. Identities = 14/152 (9%), Positives = 39/152 (25%), Gaps = 5/152 (3%) Query: 8 QRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 +R L+ ++Q + + ++ ++ Q V ++ + + + A Sbjct: 813 KRTLFDNMQAGTVMKAFTSIFAQILRLRQSCCHPVLVRNQEILADEEEANMAADVAAGLA 872 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 + + F + K + NE P+ P Sbjct: 873 DDMDLQTLIERFTATTDDASKTNNNFGAHVLRQIRDEAVNE--CPICAEEPMIDQAVTGC 930 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + + + R R+ Sbjct: 931 WHSACKKCLLDYIKHQTDRNE-VPRCFQCREH 961 >gi|322493154|emb|CBZ28439.1| putative DNA repair protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 736 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN 105 ++++ + + A +I+ F S + +L I+++ Sbjct: 510 LRSIHDMQKNHPADKMIIFSQFTSFMDVISVALDRYNIAFLRIDGTMSLSNRNAVIRQFQ 569 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I ++ A + G GLNL N +V WW+ IE V R + G K+ Sbjct: 570 TTEHIKIVLASKTATGVGLNLTA-ANHVVVVDPWWNPA-----IEEQAVHRCYRIGQKKP 623 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+V I +TI++ + + K D +L A Sbjct: 624 VYVTRFIIADTIEQYCYEICQRKKEFGDAVLRA 656 >gi|269860637|ref|XP_002650038.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348] gi|220066525|gb|EED44003.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348] Length = 1176 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 24/241 (9%), Positives = 62/241 (25%), Gaps = 50/241 (20%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKH------------- 47 + Y + + LQ N + ++ + + Sbjct: 504 RYYRAILEKNFEFLQSNSKKNVPNLINAMMELRKCCIHPYLLKGAEETIVRDYLQRKKIN 563 Query: 48 -WKEVHDEKIKALEVIIEK-------------------ANAAPIIVAYHFNSDLARLQKA 87 V + E + + +++ L L + Sbjct: 564 VRVNVDNMLHSLGEDLYYQILIQSSGKLVLLDKLLVKLQGKHKVLIFSQMTKCLDLLSEY 623 Query: 88 FPQGRTLDKD----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + I ++ + + G G+NL + + F Sbjct: 624 LSYRKFKYERIDGSIRGDLRQAAIDRFSTEDSFVFLLCTRAGGVGINLTA-ADTCIIFDS 682 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + + R + G K V +Y L+ +N+ + + + K + +L Sbjct: 683 DWNPQN-----DLQAQARCHRIGQKNQVKIYRLVTKNSYEREMFDKAGMKLGLDKAVLQK 737 Query: 198 L 198 + Sbjct: 738 M 738 >gi|159897832|ref|YP_001544079.1| helicase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159890871|gb|ABX03951.1| helicase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 669 Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 9/173 (5%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 + + L++ + K + K ++I+ A + F D Sbjct: 444 ELERLLKIVDE--MQIPSKARTLLKIIKNDDSKIIVYTEFVATLEFLRDFLVDHGVESVL 501 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 F G + + ++ + +GK + S G GLNLQ+ + LV + L W+ +Q Sbjct: 502 FHGGLSGMQKRNAVERFRDGKAQVFL-STESGGQGLNLQF-CHRLVNYDLPWNPMRIEQR 559 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 I R+ + G +R V +Y LI + TI+E +L L K + ++ + Sbjct: 560 IGRV-----HRYGQERPVEIYTLILRGTIEEYILHVLTGKIDMFQTVIGEIDA 607 >gi|302502981|ref|XP_003013451.1| hypothetical protein ARB_00269 [Arthroderma benhamiae CBS 112371] gi|291177015|gb|EFE32811.1| hypothetical protein ARB_00269 [Arthroderma benhamiae CBS 112371] Length = 1019 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 AN ++V H L LQ F + + + +N + + + Sbjct: 620 HANGDKVLVFSHNVRLLKMLQMLFNHTSYNVSYLDGSMSYEDRSNIVNAFNSDPRQFVFL 679 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G R V V+ L++ Sbjct: 680 ISTKAGGVGLNITS-ANKVVVVDPNWNPA-----YDLQAQDRAYRIGQLRDVEVFRLVSA 733 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 734 GTIEEIVYARQIYKQQQAN 752 >gi|296424248|ref|XP_002841661.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637907|emb|CAZ85852.1| unnamed protein product [Tuber melanosporum] Length = 1022 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 24/168 (14%) Query: 52 HDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKD 97 K++ L + + V F + L ++K F + K Sbjct: 848 SSAKVEMLIEKLSETERSCPERKSCVFSQFTTFLDIIEKELQRRRIKFLRFDGSMSQQKR 907 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + +L + G GLNL + + WW +E + R Sbjct: 908 AEVVSTFKMDQGPNILLLSLRAGGVGLNLTT-ASQVFMMDPWWSFA-----VEAQAIDRV 961 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQ-RLRTKSTIQDL--LLNALKKE 201 + G V VY + + T++E ++ K I ++N +K+ Sbjct: 962 HRMGQTSEVMVYRFVVEGTVEERIVHTIQARKKFIASSLGMMNDEEKK 1009 >gi|322806869|emb|CBZ04439.1| hypothetical protein H04402_02632 [Clostridium botulinum H04402 065] Length = 366 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 85/203 (41%), Gaps = 23/203 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y KF+++ + + S +K + QLA+ + + K+ +L+ Sbjct: 182 KEYKKFKKDRLITINNTELVGDTSLTKMLYLRQLAS------------QYNPNKLSSLKD 229 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAF----PQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +E +I+ Y+F ++ ++++ ++ ++ + ++ Sbjct: 230 SLESTED-RVIIFYNFTEEMKQIKEVCGRLEKPVSIVNGQTKDLENYKTKDNAVVLVQYQ 288 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLNLQ N +V++SL E + R + G R +YLI +N+I+ Sbjct: 289 AGAMGLNLQ-LSNKIVYYSLPLASELFE-----QSKKRTHRIGQTRTCMYWYLITKNSIE 342 Query: 178 ELVLQRLRTKSTIQDLLLNALKK 200 E + + L+ + D L L++ Sbjct: 343 EQIFETLKERKDFTDKLFEELEE 365 >gi|145532411|ref|XP_001451961.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124419638|emb|CAK84564.1| unnamed protein product [Paramecium tetraurelia] Length = 1135 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 62/167 (37%), Gaps = 18/167 (10%) Query: 51 VHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPC 99 KI+ + I++ ++ F + ++ + Sbjct: 965 KRSSKIEKVMQILDAIPKNEKCVIFTQFIGMIQMIEFDLDNQKIKHLRLDGSMPQQERAE 1024 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + + + + + G GLNL N ++ WW+ +Q IER+ + Sbjct: 1025 VLKTFKEDDEYRIFIISLKAGGVGLNLTS-ANHVIMIDPWWNPAVEEQAIERV-----YR 1078 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 G + VY LI + T++E +++ K + + + ++ ++ + Sbjct: 1079 IGQTKETHVYRLICKQTVEERMIKLHDVKKQLFESSIRTEERSSLRM 1125 Score = 37.8 bits (86), Expect = 0.94, Method: Composition-based stats. Identities = 14/141 (9%), Positives = 40/141 (28%), Gaps = 14/141 (9%) Query: 3 QYHKFQRELYCDLQG------ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y K +++ +++G + ++ Q+ + + K + Sbjct: 791 VYDKMEKKSQDEVEGYLAKGILMSQYMKVFELLIRLRQICDHPLLITSRSDVKNID---- 846 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE---GKIPLLF 113 LE I+K ++ + L Q+ ++ E P+ Sbjct: 847 -QLEEQIDKFLSSQSLDREDQEELLMNNQQVQICQDQQQYKQEVLRRVKENDIPPCPVCL 905 Query: 114 AHPASCGHGLNLQYGGNILVF 134 + L + + ++ Sbjct: 906 EQVEDTIVTICLHFLCRLCLY 926 >gi|312086132|ref|XP_003144957.1| helicase DNA-binding protein [Loa loa] gi|307759879|gb|EFO19113.1| helicase DNA-binding protein [Loa loa] Length = 1412 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PC 99 K+ + ++ K + +++ L +++ + Sbjct: 82 SSGKLVLIAKLLPKLHTDGHKVLIFSQMVRVLDIIEEFLIAQNYTFERIDGNVRGDLRQS 141 Query: 100 TIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + + + + G G+NL + ++ F W+ + + R Sbjct: 142 AIDRFSKKDSDRFIFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN-----DLQAQARCH 195 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V VY LI NT + + + K + +L + Sbjct: 196 RIGQTKMVKVYRLITCNTYEREMFDKASLKLGLDRAVLQS 235 >gi|299531068|ref|ZP_07044481.1| helicase domain-containing protein [Comamonas testosteroni S44] gi|298721025|gb|EFI61969.1| helicase domain-containing protein [Comamonas testosteroni S44] Length = 616 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 70/193 (36%), Gaps = 15/193 (7%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANA 68 ++Y ++ G+ + K V+ + G V Y E D+K+ + A Sbjct: 410 DVYKEIYGDM--TLQAMPKIVRLRKCLEGLKVPYLVETVQAMGEDDKLIIFCEYMSTVEA 467 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 +A L + +L + + + + I + + G G+ L Sbjct: 468 LKQALAS-----LGVGCVSLVGSDSLKRRQAAVDAFQRDASIKVFIGTTMAAGVGITLTA 522 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 NI+ F S+ W R R + G R V V I Q TIDE VLQ K Sbjct: 523 -ANIVAFASMPWTPALM-----RQAEDRAYRLGQIRDVLVLVPIIQGTIDEGVLQLQENK 576 Query: 188 STIQDLLLNALKK 200 T + ++ A KK Sbjct: 577 HTTEIEVVEAAKK 589 >gi|331217115|ref|XP_003321236.1| Rad54b [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309300226|gb|EFP76817.1| Rad54b [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 965 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 52/158 (32%), Gaps = 27/158 (17%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN 105 + I++K N II+ +F L ++ + +Q +N Sbjct: 661 LAKFLDILKKKNNEKIILVSNFTKTLDIVESHCKASHYPFCRLDGKTAQNQRDNIVQVFN 720 Query: 106 EGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + S G GLNL + + + R + G + Sbjct: 721 RSSASAQFIFLLSSKSGGVGLNL---------IGASRNPAT-----DLQAMARIWRQGQQ 766 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + +Y + TIDE + QR TK + L++A K Sbjct: 767 KPCHIYRFLTTGTIDECIFQRQVTKIGLATDLMSAPKA 804 >gi|328854430|gb|EGG03562.1| hypothetical protein MELLADRAFT_89936 [Melampsora larici-populina 98AG31] Length = 767 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 25/259 (9%), Positives = 74/259 (28%), Gaps = 63/259 (24%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------------ 50 Y F R+ + + + + + N + + + + + Sbjct: 496 LYQNFLRQFGVE-RKQKFQGGEFFKQLTNLRMTCNHPLLFRQIEQGVDAENQPINLIEQK 554 Query: 51 ---------VHDEK-----------------IKALEVIIEKANAAPIIVAYHFNSDLARL 84 +H+ K + + + ++ + S + + Sbjct: 555 LGIKLPDERIHNSKVRDAIPTDWKLSPKIAYLVHMLQKKKSHGGGKSVIYTQWKSFIDWI 614 Query: 85 QKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 AF + + + + G GLN+ + + Sbjct: 615 IMAFDNSGITYRQLHGDQSTFERTSQLNSFTKDPNVEAFVVSIEAGGVGLNMT-CADEVY 673 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 W+ + QQ ++R+ + G + V V++++ +I++ + + K+ + Sbjct: 674 LMDAHWNPQVVQQAVDRL-----HRIGQAKPVRVFHVVTGQSIEQHLYNVQKRKAALAKR 728 Query: 194 LL-------NALKKETIHV 205 ++ K E + V Sbjct: 729 VITLTVPTEELEKAEALRV 747 >gi|157871612|ref|XP_001684355.1| DNA repair protein [Leishmania major strain Friedlin] gi|68127424|emb|CAJ05152.1| putative DNA repair protein [Leishmania major strain Friedlin] Length = 736 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 17/148 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN-EGKI 109 + + A +I+ F S + +L I+++ I Sbjct: 515 DMQKNHPADKMIIFSQFTSFMDVISVALDRYNIAFLRIDGTMSLSNRNAVIRQFQTSEHI 574 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ A + G GLNL N +V WW+ IE V R + G K+ V+V Sbjct: 575 KIVLASKTATGVGLNLTA-ANHVVVVDPWWNPA-----IEEQAVHRCYRIGQKKPVYVTR 628 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I +TI++ + + K D +L A Sbjct: 629 FIIADTIEQYCYEICQRKKEFGDAVLRA 656 >gi|67970134|dbj|BAE01411.1| unnamed protein product [Macaca fascicularis] Length = 889 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 702 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 761 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 762 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 816 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 817 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 864 >gi|114595206|ref|XP_001163635.1| PREDICTED: SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 1 [Pan troglodytes] Length = 891 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 704 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 763 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 764 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 818 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 819 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 866 >gi|302885430|ref|XP_003041607.1| hypothetical protein NECHADRAFT_77238 [Nectria haematococca mpVI 77-13-4] gi|256722511|gb|EEU35894.1| hypothetical protein NECHADRAFT_77238 [Nectria haematococca mpVI 77-13-4] Length = 948 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 50/155 (32%), Gaps = 18/155 (11%) Query: 53 DEKIKALE-VIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTI 101 K++AL I + IV + L ++ + ++ + Sbjct: 778 SSKVEALMTDIKTLPPSEKCIVFSTWRLTLDMVEVGLEKAHIPSVRFDGKVPQNERQEIV 837 Query: 102 QEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + ++ + GL L W+ E + R + G Sbjct: 838 ERFRTDPSVRVMLLTLSCGAAGLTLT-VATRAYLMEPHWNPTL-----EEQALARIHRIG 891 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R V +++ ++ V++ +K + LLL Sbjct: 892 QTREVTTVRFYVRDSFEQHVMEVQDSKKHLSGLLL 926 >gi|148910874|gb|ABR18490.1| SNF2P [Triticum turgidum] Length = 878 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 77/231 (33%), Gaps = 41/231 (17%) Query: 2 KQY-HKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEV 51 K Y ++EL G + + + V+ + + + EE Sbjct: 303 KIYLSVLRKELQTLLSFTGGSSRHQSLQNIVVQLRKACSHPYLFSGIEPEPYEEGEHLVQ 362 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPC 99 K+ L++++EK + +++ L + ++ Sbjct: 363 ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLDGSVRAEERFA 422 Query: 100 TIQEW-------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I+ + N + + G GLNL G + ++F+ W+ + Sbjct: 423 AIRNFSSQPTKGVVRDDSNPSGAFVFMISTRAGGVGLNL-IGADTVIFYEQDWNPQA--- 478 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ + R + G V L++Q TI+E++++R K + + Sbjct: 479 --DKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGD 527 >gi|194899988|ref|XP_001979539.1| GG15997 [Drosophila erecta] gi|190651242|gb|EDV48497.1| GG15997 [Drosophila erecta] Length = 232 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 5/67 (7%) Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +++F+ W+ +++ + R + G + V VY LI + TI+E +LQR R KS I Sbjct: 1 MVIFYDSDWNPT-----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEI 55 Query: 191 QDLLLNA 197 Q ++++ Sbjct: 56 QRMVISG 62 >gi|149701562|ref|XP_001497332.1| PREDICTED: similar to SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 isoform 3 [Equus caballus] Length = 892 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 705 HINNFQLDMDLILDSGKFRVLGRILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 764 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 765 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 819 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 820 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 867 >gi|297293038|ref|XP_002804187.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like isoform 3 [Macaca mulatta] Length = 891 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 704 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 763 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 764 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 818 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 819 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 866 >gi|296810938|ref|XP_002845807.1| CHR9/SNF2/SWI2 [Arthroderma otae CBS 113480] gi|238843195|gb|EEQ32857.1| CHR9/SNF2/SWI2 [Arthroderma otae CBS 113480] Length = 1011 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 N +++ H L LQ F + ++ + +N + + + Sbjct: 622 HTNGDKVLIFSHNVRLLKMLQMLFNHTSYNVSYLDGAMSYEERANVVNSFNSDPRQFVFL 681 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ N +V W+ + R + G R V V+ L++ Sbjct: 682 ISTKAGGVGLNITS-ANKVVVVDPNWNPS-----YDLQAQDRAYRIGQLRDVEVFRLVSA 735 Query: 174 NTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 736 GTIEEIVYARQIYKQQQAN 754 >gi|224098380|ref|XP_002196003.1| PREDICTED: alpha thalassemia/mental retardation syndrome X-linked [Taeniopygia guttata] Length = 2434 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 9/120 (7%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFS 136 T +E+N+ L + G+NL N ++ F Sbjct: 2021 FRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFD 2079 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + VFVY +AQ T+++ + R TK ++ +++ Sbjct: 2080 ASWNPS-----YDIQSIFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2134 >gi|45357056|gb|AAS58484.1| SNF2P [Triticum monococcum] Length = 882 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 77/231 (33%), Gaps = 41/231 (17%) Query: 2 KQY-HKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEV 51 K Y ++EL G + + + V+ + + + EE Sbjct: 303 KIYLSVLRKELQTLLSFTGGSSRHQSLQNIVVQLRKACSHPYLFSGIEPEPYEEGEHLVQ 362 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPC 99 K+ L++++EK + +++ L + ++ Sbjct: 363 ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLDGSVRAEERFA 422 Query: 100 TIQEW-------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I+ + N + + G GLNL G + ++F+ W+ + Sbjct: 423 AIRNFSSQPTKGVVRDDSNPSGAFVFMISTRAGGVGLNL-IGADTVIFYEQDWNPQA--- 478 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ + R + G V L++Q TI+E++++R K + + Sbjct: 479 --DKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGD 527 >gi|312072073|ref|XP_003138899.1| hypothetical protein LOAG_03314 [Loa loa] gi|307765938|gb|EFO25172.1| hypothetical protein LOAG_03314 [Loa loa] Length = 1156 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 7/119 (5%) Query: 85 QKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F T + I +N + I L + G+NL + ++ F W+ Sbjct: 801 YYRFDGSTTATERERLISRFNRDHNIFLFLISTRAGSLGINLVS-ASRVIIFDASWNP-- 857 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + V R + G KR +VY LI N+++ + R K+ +Q +++ + + Sbjct: 858 ---CHDAQAVCRIYRYGQKRRTYVYRLITDNSMERAIFSRQIGKNGLQQRVVDDKQMDI 913 >gi|315042548|ref|XP_003170650.1| helicase swr1 [Arthroderma gypseum CBS 118893] gi|311344439|gb|EFR03642.1| helicase swr1 [Arthroderma gypseum CBS 118893] Length = 648 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 59/162 (36%), Gaps = 19/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFN----------SDLARLQKAFPQGRT 93 K+ + ++ K++ L +++K I+V F + Sbjct: 454 KNKEWMNSGKVEKLCELLDKYIAEGDRILVFSQFTMVMDILEQVLETQKIKFFRLDGKTS 513 Query: 94 LDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++E I + + G G+NL N ++ F ++ + + Sbjct: 514 VEDRQSILDAFHEQVDISVFMLSTKAGGAGINL-ACANKVIIFDSSFNPQ-----EDIQA 567 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G R V V L+ + TI+E + +TK + + Sbjct: 568 ENRAHRVGQTREVEVVRLVTRGTIEEQIHALGQTKLALDQRV 609 >gi|172041028|ref|YP_001800742.1| hypothetical protein cur_1348 [Corynebacterium urealyticum DSM 7109] gi|171852332|emb|CAQ05308.1| hypothetical protein cu1348 [Corynebacterium urealyticum DSM 7109] Length = 343 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 58/163 (35%), Gaps = 16/163 (9%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKA-NAAPIIVAYHFNSDLA--------RLQKAFPQG 91 + + + K++ ++ + IV +F L R G Sbjct: 143 FMQMRQSFSGPGSAKMERFAELLTDGLDDDKTIVFTYFRGVLDHLMDSLGDRAFGPIAGG 202 Query: 92 RTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + ++ + +L A + G GLN+Q N +V + +E Sbjct: 203 VSHQERQQAVDDFTAAEPGAVLVAQINAAGEGLNIQA-ANHVVLIEPQLNPA-----VEA 256 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + R + G V V+ L+ ++++E + L TK + D Sbjct: 257 QAIARAHRMGQINPVEVHRLLTPDSVEERLHLLLATKRELFDS 299 >gi|148549817|ref|YP_001269919.1| non-specific serine/threonine protein kinase [Pseudomonas putida F1] gi|148513875|gb|ABQ80735.1| Non-specific serine/threonine protein kinase [Pseudomonas putida F1] Length = 1082 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 73/221 (33%), Gaps = 38/221 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL--- 59 Y + ++++ L + + + Y + + K++ L Sbjct: 858 AYSQ-KQQIEEQLDQKT---SGMLGLLHRLKLICAHP-YSVQPDTRLRDNSPKLQWLIQT 912 Query: 60 -EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----------------DPCTI 101 E I N +IV D+ R + Q + I Sbjct: 913 LESIKRAGNGDKVIVFTELR-DIQRELQHAIQQHFGFRATVINGDTSTSSQSANSRQRLI 971 Query: 102 QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ E ++ + G G+N+Q N ++ F+ W+ + E R + G Sbjct: 972 DQFQELPGFAVIILSTIAVGFGVNVQA-ANHVIHFTRCWNPAK-----EDQATDRAYRIG 1025 Query: 161 FKRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLLNA 197 ++ V+VYY ++ T + + + L + + +L+ Sbjct: 1026 QQKDVYVYYPTVRDAAMPTFEATLDELLSKRRALARDMLSG 1066 >gi|297293040|ref|XP_002804188.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like isoform 4 [Macaca mulatta] Length = 889 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 702 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 761 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 762 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 816 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 817 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 864 >gi|29829734|ref|NP_824368.1| bifunctional protein [Streptomyces avermitilis MA-4680] gi|15824163|dbj|BAB69326.1| putative bifunctional protein [Streptomyces avermitilis] gi|29606843|dbj|BAC70903.1| putative bifunctional protein [Streptomyces avermitilis MA-4680] Length = 701 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 61/153 (39%), Gaps = 17/153 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTI 101 K+ L ++ + N ++V +F LA +Q+ G + + Sbjct: 508 KSAKLGRLRELVAEAADNGLKVVVFSYFREVLATVQQCLGEPVLGPISGGVPAARRQRLV 567 Query: 102 QEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +L A + G GLNLQ ++++ +E V R + G Sbjct: 568 DAFAAIDGHAVLLAQIEAGGTGLNLQA-ASVVILCEPQVKPT-----MEHQAVARAHRMG 621 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R V V+ L+A +++D+ +L+ L+ K + D Sbjct: 622 QIRTVQVHRLLATDSVDDRLLRILKNKDRLFDA 654 >gi|148684276|gb|EDL16223.1| stretch responsive protein 278, isoform CRA_b [Mus musculus] Length = 1546 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 516 KMKVLQQLLNHFRKQRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 560 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N+++ F W+ Sbjct: 561 LDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPAN--- 616 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 617 --DLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 669 >gi|325661424|ref|ZP_08150050.1| hypothetical protein HMPREF0490_00784 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472373|gb|EGC75585.1| hypothetical protein HMPREF0490_00784 [Lachnospiraceae bacterium 4_1_37FAA] Length = 493 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 75/196 (38%), Gaps = 12/196 (6%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y+ ++ + F +K +K ++ +G V + + K LE Sbjct: 299 KYYNDILNDIKEHIN--EWSKFEFTAKLMKLREVVSGFVI-QKNGDVTDFKTNKDNILED 355 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---DPCTIQEWNEGKIPLLFAHPAS 118 + + +IV F ++ +L + F K I+ + G I LLFAHP Sbjct: 356 TLNEIGDKQVIVWCQFIHEIEKLAEKFDGTALTSKTKNRDDIIRSFKNGDIKLLFAHPKL 415 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G + ++SL + EE +Q +RI + G L +NTID+ Sbjct: 416 LGKGATFTNCTYNI-YYSLSFSYEEFKQSQDRI-----HRIGQANKCTYIILQGKNTIDK 469 Query: 179 LVLQRLRTKSTIQDLL 194 + L+ K D L Sbjct: 470 RIYNSLQRKGNAVDEL 485 >gi|229163175|ref|ZP_04291130.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus R309803] gi|228620238|gb|EEK77109.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus R309803] Length = 560 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 68/177 (38%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ N +I F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKATKALELIQEINDKVVIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKELFQN-RAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|255078968|ref|XP_002503064.1| SNF2 super family [Micromonas sp. RCC299] gi|226518330|gb|ACO64322.1| SNF2 super family [Micromonas sp. RCC299] Length = 1866 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 50/160 (31%), Gaps = 22/160 (13%) Query: 60 EVIIEKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGK 108 + ++ + ++ FNS L+ + +D + Sbjct: 1667 RKMRDEDGSNKALIFSQFNSTLSWLQERLPEEGFGFRTISGSMPLKQRDQAIQAFQKDPP 1726 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + S G+NL + ++ + + R + G +R V V Sbjct: 1727 TTVFLLSMRSGAVGINLTS-ATHVFLVEPAFNPALTE-----QAIGRSWRMGQRREVRVK 1780 Query: 169 YLIAQNTIDELVLQRLRTKSTI-----QDLLLNALKKETI 203 +LI N+I+ + + L + ++ A K+ + Sbjct: 1781 HLIVANSIESNIRKLLAAREETKPEDEAADVIEAEKQRGM 1820 >gi|219883149|ref|YP_002478311.1| helicase domain protein [Cyanothece sp. PCC 7425] gi|219867274|gb|ACL47612.1| helicase domain protein [Cyanothece sp. PCC 7425] Length = 894 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 64/194 (32%), Gaps = 12/194 (6%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 + E L + N+ + + ++ + E+ + K +I Sbjct: 436 EEEYLAKL----VNLSNAITSETRIRRILDLLKGDFAERSVLFFTEYKATQSLLINALIQ 491 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 N D R IQ +NEG+ + G G++LQ Sbjct: 492 HYGETAVTFINGDQEVHNVNGRTIRCP--RERAIQLFNEGEAR-FLVSTEAAGEGVDLQQ 548 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + L+ + W+ Q + R+ + G V V L +TI+ + +RL K Sbjct: 549 NCHTLIHVDIPWNPMRLHQRVGRL-----YRYGQTHKVEVVTLRNPDTIEATIWERLEEK 603 Query: 188 STIQDLLLNALKKE 201 L L+ + +E Sbjct: 604 MQRIQLALSGVMEE 617 >gi|242793636|ref|XP_002482204.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218718792|gb|EED18212.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1788 Score = 75.6 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 69/160 (43%), Gaps = 7/160 (4%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK- 96 + +K++ +E ++ E I+ + + P + + ++ G T K Sbjct: 1373 DPKHSHRADIFKKIVEESVRLEEKILCFSQSIPTLDYLERLLRSSGVRFYRLDGSTAVKN 1432 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +N+G+I + + G GLN+ G N ++ F ++ E V R Sbjct: 1433 RQKDVKSFNQGEISVYLISTRAGGLGLNIT-GANRVIIFDFSFNPT-----WEEQAVGRA 1486 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G ++ V+VY +A T +E+V + K+ + +++ Sbjct: 1487 YRLGQEKPVYVYRFLAGGTYEEVVHNKSIFKTQLAMRVVD 1526 >gi|213405915|ref|XP_002173729.1| DNA repair protein rad5 [Schizosaccharomyces japonicus yFS275] gi|212001776|gb|EEB07436.1| DNA repair protein rad5 [Schizosaccharomyces japonicus yFS275] Length = 1108 Score = 75.6 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 53/161 (32%), Gaps = 17/161 (10%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------- 97 +H +K L + E+ +++ F + L + Sbjct: 934 HQHQSIKLTSLLKHLRRVFEEHKDEKVVIFSQFTTFLDYISTLLHSQGIEHTRFDGSMSQ 993 Query: 98 ----PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +L + G GLNL N + WW +E + Sbjct: 994 IARANALEHFRDSKTSNVLIVSLKAGGVGLNLT-CANHVYLMDPWWSWS-----VEAQAL 1047 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G ++AV V I +++++E +L+ K+ I L Sbjct: 1048 DRVHRLGQEKAVHVTRFIIRDSVEERMLKIQERKNFIAGTL 1088 Score = 34.3 bits (77), Expect = 9.9, Method: Composition-based stats. Identities = 3/34 (8%), Positives = 6/34 (17%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 S ++ Q + E Sbjct: 784 NYTTILSLLLRLRQACCHPKLLLHKGSEAENASS 817 >gi|169620129|ref|XP_001803476.1| hypothetical protein SNOG_13266 [Phaeosphaeria nodorum SN15] gi|160703967|gb|EAT79150.2| hypothetical protein SNOG_13266 [Phaeosphaeria nodorum SN15] Length = 1106 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 6/118 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 R + + ++D + I ++ + G GLNL N + Sbjct: 972 KDHQHRYCRLDGRMSRQNRDESMRVFREDPTIIVMLVSIGAGGLGLNLTT-ANKVFMMEP 1030 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++ Q ++R+ + G R V + I N+ +E +++ + K + DL L Sbjct: 1031 QFNPAAEAQAVDRV-----HRLGQDREVMIKRFIMDNSFEEKMVELQQKKKKLADLTL 1083 >gi|70951871|ref|XP_745142.1| DNA repair protein rad54 [Plasmodium chabaudi chabaudi] gi|56525372|emb|CAH78699.1| DNA repair protein rad54, putative [Plasmodium chabaudi chabaudi] Length = 1032 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 21/138 (15%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 I+ K N + G ++ K I ++ N I + Sbjct: 570 YMEILCKENHYKFVR--------------LDGGISIKKRHKVISDFTNTDDIFIFLLSSK 615 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G G+NL N L+ W+ ++ + R + G K+ ++Y L TID Sbjct: 616 SGGCGINL-ISSNRLILLDPDWNPAN-----DKQALARVWREGQKKICYIYRLFCTGTID 669 Query: 178 ELVLQRLRTKSTIQDLLL 195 E V QR +K + +++ Sbjct: 670 EKVYQRQISKDGLSSMIV 687 >gi|121716002|ref|XP_001275610.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] gi|119403767|gb|EAW14184.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] Length = 1179 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 6/106 (5%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + + +L A + G GLNL + + ++ Q I+R+ Sbjct: 1061 PARNRALEDFHSNNETTILLATIGAGGVGLNLTS-ASKVYIMEPQYNPAAVAQAIDRV-- 1117 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V I + +I+E + + + K + D+ +N K Sbjct: 1118 ---HRLGQTRDVTTVQFIMKGSIEEKIFELAKRKQQLADMSMNRGK 1160 >gi|134287906|ref|YP_001110070.1| helicase domain-containing protein [Burkholderia vietnamiensis G4] gi|134132556|gb|ABO60182.1| helicase domain protein [Burkholderia vietnamiensis G4] Length = 682 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 19/167 (11%) Query: 50 EVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFP-----------QGRTLDKD 97 E+ K++ + +I+ N +++ F ++A ++A + + Sbjct: 509 ELESYKVRPIVEMIKDLNGDDKVLLFCEFKENVALFKQALDEVGIGYSVLTGDMSSPTRR 568 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+ + + A+ G G NL N + SL W R Sbjct: 569 QRAIDEFQSDPLKRVFITTTAAGGVGHNLTA-ANYVFLVSLPWTPGL-----AAQAEDRA 622 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G R V V + +NTID +++ R K +I +L+ + E + Sbjct: 623 FRNGQLRLVIVLIPLVENTIDMDLVEMHRNKQSIAAEILDPEEAERL 669 >gi|145488703|ref|XP_001430355.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124397452|emb|CAK62957.1| unnamed protein product [Paramecium tetraurelia] Length = 1100 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 18/170 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL----------QKA 87 K K+ L +I K + II+ L Sbjct: 755 RMLFPNKKLLIYDCGKMNTLVSLIYKLKSQNHKIIIFTQMTKMLDLFEAVLSLSKISYLR 814 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ ++ +N+ I + S G GLNL G + ++F+ W+ Sbjct: 815 LDGSTPVEMRQKIVESFNQLNITCFISSTRSGGIGLNLT-GADTVIFYDTDWNPA----- 868 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ R + G R V +Y LI +TI+E + + K + D ++ + Sbjct: 869 MDKQAQDRCHRIGQVRPVTIYRLITNSTIEENIFLKSLQKRQLDDFVMQS 918 >gi|237836947|ref|XP_002367771.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49] gi|211965435|gb|EEB00631.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49] gi|221482002|gb|EEE20368.1| DNA repair and recombination protein RAD54, putative [Toxoplasma gondii GT1] gi|221505079|gb|EEE30733.1| DNA repair and recombination protein RAD54, putative [Toxoplasma gondii VEG] Length = 693 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 20/152 (13%) Query: 55 KIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCTI 101 K++ LE ++ ++ I++ +F S L ++ + + Sbjct: 522 KLQFLENLLLSIRSSSNDKIVIVSNFTSTLDNIEIFMQAKGYSFLRLDGSTAVKDRTGLV 581 Query: 102 QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NE K + G GLNL G N LV W+ Q + R + G Sbjct: 582 KTFNESKECFAFLLSSKAGGVGLNL-IGANRLVLLDPDWNPANDQ-----QALARVWRPG 635 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V++Y L+ TI+E +LQR K+T+ Sbjct: 636 QINPVYIYRLVGARTIEEKILQRQAYKATLAQ 667 >gi|326924514|ref|XP_003208472.1| PREDICTED: LOW QUALITY PROTEIN: transcriptional regulator ATRX-like [Meleagris gallopavo] Length = 2479 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 69/200 (34%), Gaps = 24/200 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI-----I 63 ++ D E +E + L++A +E V + + +L++I + Sbjct: 1991 KDFVTDADAEVLEHSGKMVLLFEILRMA------EELGDKVLVFSQSLISLDLIEDFLEL 2044 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQEWNEGKI---PLLFAHP 116 + + + T +E+N+ L Sbjct: 2045 ANREKTDKEKPPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIIST 2104 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G+NL N ++ F W+ + + R + G + VFVY +AQ T+ Sbjct: 2105 KAGSLGINLVA-ANRVIIFDASWNPS-----YDIQSIFRVYRFGQSKPVFVYRFLAQGTM 2158 Query: 177 DELVLQRLRTKSTIQDLLLN 196 ++ + R TK ++ +++ Sbjct: 2159 EDKIYDRQVTKQSLSFRVVD 2178 >gi|330840974|ref|XP_003292481.1| hypothetical protein DICPUDRAFT_50468 [Dictyostelium purpureum] gi|325077256|gb|EGC30980.1| hypothetical protein DICPUDRAFT_50468 [Dictyostelium purpureum] Length = 928 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 22/170 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLA----------RLQKAFP 89 K ++ + K+ ++ ++ K + +++ ++ L Sbjct: 601 NPKVFQPQYSSKLLFVDRLLTKIRDSKSGDKVVIISNYTQTLEVLAIMCKTRGYAYFQLD 660 Query: 90 QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 K + +N+ K P + G GLNL GGN LV F W+ Sbjct: 661 GSTPNAKRQQLVDLYNDPKRPEFAFLLSSKAGGVGLNL-IGGNHLVLFDADWNPAN---- 715 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G K+ V +Y TI+E + QR TK + + Sbjct: 716 -DAQSMARVWREGQKKVVSIYRTFTTGTIEEKIFQRQLTKQALSTSITEG 764 >gi|301604464|ref|XP_002931858.1| PREDICTED: transcriptional regulator ATRX [Xenopus (Silurana) tropicalis] Length = 2268 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 9/120 (7%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFS 136 + +E+N+ L + G+NL N ++ F Sbjct: 1852 FRNIDYYRLDGQTSPQTRKKWAEEFNDSTNIRGRLFLISTKAGSLGINLVA-ANRVIIFD 1910 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + VFVY +AQ T++E + R K ++ +++ Sbjct: 1911 ASWNPS-----YDIQSIFRVYRFGQIKPVFVYRFLAQGTMEEKIYDRQIAKQSLSFRVID 1965 >gi|301062743|ref|ZP_07203355.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] gi|300443150|gb|EFK07303.1| SNF2 family N-terminal domain protein [delta proteobacterium NaphS2] Length = 896 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 64/191 (33%), Gaps = 18/191 (9%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS 79 ++ V+ + + D + H E ++ ++ ++ +I + Sbjct: 569 MDIRRIQELLVRMRMVCDSTYLIDRKTHVSPKLTELASVIDELVIESKRKMVIFSEWTTM 628 Query: 80 DLARLQKAFPQGRTL---------DKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGG 129 + G K I E+ N + + G GLNLQ Sbjct: 629 TFLIARHLSEVGIPFVELSGKIPVKKRQSLIDEFTNNPDCRVFL-STDAGGTGLNLQA-A 686 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF-VYYLIAQNTIDELVLQRLRTKS 188 + +V F L W+ + Q I R+ + G K V I + T++E + ++ K+ Sbjct: 687 DCVVNFELPWNPAKLNQRIGRV-----SRIGQKSQCINVVNFICKGTVEEKIFAGIQLKT 741 Query: 189 TIQDLLLNALK 199 + + + Sbjct: 742 ELFKGVFEGGE 752 >gi|321262907|ref|XP_003196172.1| DNA repair protein RAD5 [Cryptococcus gattii WM276] gi|317462647|gb|ADV24385.1| DNA repair protein RAD5, putative [Cryptococcus gattii WM276] Length = 1359 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 71/210 (33%), Gaps = 19/210 (9%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 +R + E N ++K + + + +E + + Sbjct: 1143 LKRAVRKKYIRPPGEKLNLSTKMQFLHDELLRFSKKNPHSAHYDPFSLEGDDVEEMDAEG 1202 Query: 67 NA--APIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQE-WNEGKIPLLF 113 IV + + L R+ + T D+ I ++ + +L Sbjct: 1203 KPVVTKSIVFSQWTTMLDRIADMLDETNIRYARLDGTMTRDERSRAIDALRHKKNVEVLL 1262 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + +W+ Q I+RI + G R V L+ + Sbjct: 1263 VSTRAGGVGLNLT-VASRCYLVDPYWNPSVESQAIDRI-----HRMGQTRPVVAIKLMIK 1316 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETI 203 ++I+E + + + K+ + L L + ++ + Sbjct: 1317 DSIEEKLDKIQKKKAELAQLSLKNMSRKEL 1346 >gi|310641398|ref|YP_003946156.1| helicase protein [Paenibacillus polymyxa SC2] gi|309246348|gb|ADO55915.1| Helicase protein [Paenibacillus polymyxa SC2] Length = 630 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQ 102 + K + +I K N +I+ + D + G + + Sbjct: 376 NSKAEKALELIRKMN-EKVIIFTEYRATQEYLLNYFRDRGLSAVPYRGGMNRGRKDWMMD 434 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+I ++ A + G G+NLQ+ + ++ F L W+ +Q I R+ + G K Sbjct: 435 LFR-GRIQVMIAT-EAGGEGINLQF-CHHMINFDLPWNPMRVEQRIGRV-----HRLGQK 486 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V ++ L TI+E +L L K + ++++ L Sbjct: 487 HDVNIFNLSTTGTIEEHILHLLHEKINMFEMVIGGL 522 >gi|156393888|ref|XP_001636559.1| predicted protein [Nematostella vectensis] gi|156223663|gb|EDO44496.1| predicted protein [Nematostella vectensis] Length = 814 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 9/103 (8%) Query: 97 DPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +N+ L + G G+NL N ++ F W+ Q I R+ Sbjct: 617 RQRWADIFNDPDNKTARLFLISTKAGGLGINLVA-ANRVIVFDASWNPSHDVQSIFRV-- 673 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G +AV+VY ++Q T++E V R K +I + +++ Sbjct: 674 ---YRFGQTKAVYVYRFLSQGTMEERVYDRQVAKLSISERVVD 713 >gi|157126395|ref|XP_001654617.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti] gi|108873303|gb|EAT37528.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti] Length = 2905 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 44/184 (23%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDK------------- 96 K++ + I+++ ++ F + L ++ + +K Sbjct: 1797 PSGKLRIMFEILKQCQERGEKCLIFSAFVAVLNVVEHFMTKIHNREKESMADVYGYSTFK 1856 Query: 97 --------------------DPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILV 133 I +N+ + + G G+NL G N ++ Sbjct: 1857 GPWEPGKDYYRLDGKTQKNLRHRMITSFNDPSNKRTKCFLISAKAGGQGINL-IGANRVI 1915 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 W+ QQ I RI + G K+ FVY L+A T++E V R TK + Sbjct: 1916 ILDTSWNPSNDQQNIFRI-----FRLGQKKKCFVYRLLAMGTMEEKVYSRSVTKQAMSFR 1970 Query: 194 LLNA 197 +++ Sbjct: 1971 VVDE 1974 >gi|312072535|ref|XP_003139110.1| hypothetical protein LOAG_03525 [Loa loa] gi|307765725|gb|EFO24959.1| hypothetical protein LOAG_03525 [Loa loa] Length = 770 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 9/118 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R K ++N+ L+ + G N+ N +V F W Sbjct: 398 RDYMVIDGQVQTSKRHEIQTKFNDPNNLRARLMLISTRAGSLGTNMVA-ANRVVIFDACW 456 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G + V++Y IAQ T++E + +R TK + +++ Sbjct: 457 NPSH-----DTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDE 509 >gi|62733578|gb|AAX95695.1| SNF2 family N-terminal domain, putative [Oryza sativa Japonica Group] gi|108710803|gb|ABF98598.1| Swi2/Snf2-related protein DDM1, putative [Oryza sativa Japonica Group] Length = 811 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 60/168 (35%), Gaps = 13/168 (7%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 K L+ + + K+ +I + + ++ Sbjct: 565 KLLEQCGKFQLLNRLLNLLLARKHKV-----LIFSQWTKVLDIIEYYLETKGLQVCRIDG 619 Query: 91 GRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L++ I E+N+ + + + G G+NL + + + W+ + + Sbjct: 620 SVKLEERRRQIAEFNDLNSSMNIFILSTRAGGLGINLTS-ADTCILYDSDWNPQ-----M 673 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R + G R V VY L ++++ ++++ K ++ +++ Sbjct: 674 DLQAMDRCHRIGQTRPVHVYRLATSHSVEGRIIKKAFGKLRLEHVVIG 721 >gi|66812364|ref|XP_640361.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60468377|gb|EAL66383.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1640 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 68/221 (30%), Gaps = 44/221 (19%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y++ +R+ +L + QL E K ++ ++ Sbjct: 1412 QLYNQTERQFQNELH-------------NRLNQLIERQRENQEAKQMSKIDSLFSTKVKT 1458 Query: 62 IIEKAN----------AAPIIVAYHFNSDLA---------------RLQKAFPQGRTLDK 96 ++ ++ + S L + + K Sbjct: 1459 LLGDIQNDLIDNEDNADEKCLIVSQWTSMLDLIEESLKQNHWVKNTHYVRYDGRCSHQQK 1518 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D Q + + ++ S G GLNL N + WW+ R Sbjct: 1519 DKAIKQLNEDDDVRVMLVSLKSGGVGLNLTR-ANRVYMVDPWWNEASEV-----QAEGRV 1572 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R VFV I N+I+ +L+ +K+ I + LL+ Sbjct: 1573 HRIGQTREVFVKRYIMNNSIEIRILELQESKNEIANALLSD 1613 >gi|147845330|emb|CAN81246.1| hypothetical protein VITISV_014031 [Vitis vinifera] Length = 716 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 44/99 (44%), Gaps = 8/99 (8%) Query: 100 TIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+E+N+ + + G G+NL + + + W+ + ++ + R Sbjct: 528 LIEEFNDMNSNCRVFLLSTRAGGLGINLTA-ADTCILYDSDWNPQ-----MDLQAMDRCH 581 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V VY L +I+ +L+R +K ++ +++ Sbjct: 582 RIGQTKPVHVYRLATAQSIEGRMLKRAFSKLKLEHVVIG 620 >gi|331248703|ref|XP_003336974.1| hypothetical protein PGTG_18553 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309315964|gb|EFP92555.1| hypothetical protein PGTG_18553 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 711 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 56/179 (31%), Gaps = 27/179 (15%) Query: 26 ASKTVKCLQLANGAVYYDE----EKHWKEVHDEKIKALEVIIEKANA-------APIIVA 74 + Q N ++ + +K+W+ K+ L +E+ +V Sbjct: 532 FKQLTMIRQFCNHPIFARDEIPHQKNWRWQDSAKLVHLVDNLERFLRGGRGILRPKAVVF 591 Query: 75 YHFNSDLA---------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 F + L ++ + + K + + + +L + G G++ Sbjct: 592 SSFVAFLEIIEKALKEKQMGCTWLMTLGIAKRDENLARFRTDPNCNILLGSIQAAGVGID 651 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 L + W+ +E V R + G V VY Q +++ + Q Sbjct: 652 L-RCAQNVYMMEPNWNPA-----MENQAVDRLYRLGQTNEVHVYRYYVQGSLEMNIHQA 704 >gi|115930771|ref|XP_001182799.1| PREDICTED: similar to MGC108253 protein, partial [Strongylocentrotus purpuratus] Length = 1302 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 70/185 (37%), Gaps = 21/185 (11%) Query: 32 CLQLANGAVYYDEEKHWKEV--HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA 87 +L + E + +++ K + L+ ++ K + +++ F L +Q+ Sbjct: 1120 LHRLCHEYSGLREYRLDQDLVTQSGKFQLLDKMLADLKEQGSRVLLFSQFVMVLDIVQEY 1179 Query: 88 ----------FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + I ++N + + + G G+NL N ++ Sbjct: 1180 LKIRGHKFVRMDGQTPVAERAQLIDKFNKNDSVFIFMLSTRAGGVGINLTA-ANTVILHD 1238 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++ ++ R + G R V V L+++ TI+E +L + K ++ + + Sbjct: 1239 IDFNP-----YNDKQAEDRCHRVGQTREVSVIRLVSKQTIEEGMLSCAKYKLKLEKQMTS 1293 Query: 197 ALKKE 201 + E Sbjct: 1294 GISGE 1298 >gi|67624283|ref|XP_668424.1| SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Cryptosporidium hominis TU502] gi|54659629|gb|EAL38197.1| SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Cryptosporidium hominis] Length = 807 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 77/211 (36%), Gaps = 30/211 (14%) Query: 2 KQYHKFQ-RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 K Y + + + L I + L + N + + + K++ Sbjct: 599 KGYSRIKVEQYITQLCDYEIHQ-----LVSRLLIVKNSPLLERFRIDDELIINGSCKLRK 653 Query: 59 LEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-------------KDPCTIQ 102 + II+ N ++ H L +++ + + I+ Sbjct: 654 MNEIIQSTVIENKEKCLIFCHHTMLLDIIEEYIKIKYNMSDFYLRLDGTTPILERQNMIE 713 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ ++PL + G GLNL + ++ L ++ + IE+ R + G Sbjct: 714 KFQTTQVPLFLLSTKAAGQGLNLT-VASSVIMMDLDYNPQ-----IEKQAEDRVHRIGQS 767 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + V ++ L+ ++TI+E + ++K T+ + Sbjct: 768 KQVKIFKLVCKDTIEENIFNCCQSKLTLDNA 798 >gi|116326115|ref|YP_803440.1| global transactivator-like protein [Anticarsia gemmatalis nucleopolyhedrovirus] gi|112180853|gb|ABI13830.1| global transactivator-like protein [Anticarsia gemmatalis nucleopolyhedrovirus] Length = 498 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 70/226 (30%), Gaps = 38/226 (16%) Query: 3 QYHKFQ-------RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW------- 48 Y + + + + + Q+ + Sbjct: 264 VYDTLKSESQRAYDDAVAGGGDKTRNMQDVLWLLCRLRQMCCHPALTKCAHMFADQAIIF 323 Query: 49 -KEVHDEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTL---------- 94 + K + + I+++ +++ + L + K Q Sbjct: 324 EPQYVSSKCRRVLEIVQQVLDTPNDKVVLVSQWVEFLYIVAKLLQQRGIPILLYTGQLRV 383 Query: 95 DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ ++N + +L G GLNL GGN ++ W+ + IE Sbjct: 384 EERTAVENQFNAADSPYRVLLMSINCGGVGLNLT-GGNHIIMLEPHWNPQ-----IELQA 437 Query: 153 VTRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQDLLLN 196 +R + G K+ +VY ++ N+I+ + R K T + + + Sbjct: 438 QSRIHRMGQKKQTYVYKMLNDEDNSIERYMKMRQDNKLTFVNKVFD 483 >gi|67763824|ref|NP_033236.2| helicase-like transcription factor isoform 1 [Mus musculus] gi|60390920|sp|Q6PCN7|HLTF_MOUSE RecName: Full=Helicase-like transcription factor; AltName: Full=P113; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3; AltName: Full=Sucrose nonfermenting protein 2-like 3; AltName: Full=TNF-response element-binding protein gi|34785644|gb|AAH57116.1| Helicase-like transcription factor [Mus musculus] gi|37590668|gb|AAH59240.1| Helicase-like transcription factor [Mus musculus] gi|148702945|gb|EDL34892.1| mCG123397, isoform CRA_c [Mus musculus] Length = 1003 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 56/162 (34%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + K +V F + L+ ++ K +IQ Sbjct: 830 NALMHALIELRTKDPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQ 889 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 890 RFQNTEAGSPTIMLLSLKAGGVGLNLCA-ASRVFLMDPAWNPAAEDQCFDRC-----HRL 943 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V + I +++++E +L+ TK + K + Sbjct: 944 GQKQEVIITKFIVKDSVEENMLKIQNTKRDLAAGAFGTKKTD 985 Score = 36.3 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 18/80 (22%), Gaps = 7/80 (8%) Query: 2 KQYHKFQRELYCDLQ----GENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + E + + A + ++ Q+ Sbjct: 670 KIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHLLT-NGMSSSGPSRS 728 Query: 56 IKALEVIIEKANAAPIIVAY 75 E+ II++ Sbjct: 729 DTPEELRKMLIEKMKIILSS 748 >gi|22328039|ref|NP_201200.2| CHR24 (chromatin remodeling 24); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|18087573|gb|AAL58917.1|AF462829_1 AT5g63950/MBM17_5 [Arabidopsis thaliana] gi|22655364|gb|AAM98274.1| At5g63950/MBM17_5 [Arabidopsis thaliana] gi|332010436|gb|AED97819.1| protein chromatin remodeling 24 [Arabidopsis thaliana] Length = 1090 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 54/161 (33%), Gaps = 19/161 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCT 100 K+ + ++E +++ L +Q T Sbjct: 731 SCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLKT 790 Query: 101 IQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++E+ EG + P+ G GL L + ++ W+ Q ++R + Sbjct: 791 VEEFQEGHVAPIFLLTSQVGGLGLTLTK-ADRVIVVDPAWNPSTDNQSVDR-----AYRI 844 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G + V VY L+ T++E + ++ K + ++ Sbjct: 845 GQTKDVIVYRLMTSATVEEKIYRKQVYKGGLFKTATEHKEQ 885 >gi|324501944|gb|ADY40860.1| Helicase ARIP4 [Ascaris suum] Length = 1138 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 7/117 (5%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + F I +N+ ++ L + G+NL N ++ F W+ Sbjct: 817 NQTYLRFDGSTPAIDREKLINRFNDDPQVYLFLISTRAGSLGINLVA-ANRVIIFDASWN 875 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V R + G K+ F+Y L+ N++++ + R KS +Q +++ Sbjct: 876 P-----CHDAQAVCRIYRYGQKKRTFIYRLVMDNSMEKGIFNRQIGKSGLQQRVVDD 927 >gi|196006111|ref|XP_002112922.1| hypothetical protein TRIADDRAFT_25151 [Trichoplax adhaerens] gi|190584963|gb|EDV25032.1| hypothetical protein TRIADDRAFT_25151 [Trichoplax adhaerens] Length = 678 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 66/179 (36%), Gaps = 22/179 (12%) Query: 32 CLQLANGAVYYDEEKHWKEV--HDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA 87 QL N + +E+ KIK L+ ++ K +++ F L ++ Sbjct: 477 LHQLCNEFHVLSKYLMPQELLFDSGKIKCLDRLLPLMKERGDRVLLFSQFVMVLDIIECY 536 Query: 88 FPQG----------RTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFF 135 + I ++N+ + + + G G+NL N+++ Sbjct: 537 IQYRGYSYLRMDGQTPIKDRLDLIDQFNDSEADKFIFLLSTKASGLGINLTS-ANVVILH 595 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + ++ ++ R + G + V VY LI +TID+ +LQ K ++ + Sbjct: 596 DIDFNP-----HNDKQAEDRCHRVGQDKDVIVYRLICPDTIDQTMLQFCDNKLHLEKSV 649 >gi|289614685|emb|CBI58522.1| unnamed protein product [Sordaria macrospora] Length = 1159 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 19/163 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 I L + ++ +V F S L + + + E+ Sbjct: 993 ISHLRALRQEHPKMKSLVISQFTSFLTLISSALARHKIAFLRLDGSMSQKARAAVLTEFQ 1052 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 +L + G GLNL + WW +E + R + G + Sbjct: 1053 ASNKFCVLLLSLKAGGVGLNLTN-AKRVYMMDPWWSFA-----VEAQAIDRVHRMGQEDE 1106 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDL--LLNALKKETIHV 205 V VY I + +++ +L+ K I +++ +K + Sbjct: 1107 VRVYRFIVKQSVEMRMLRVQERKKFIATSLGMMSDEEKRVQRI 1149 >gi|168027824|ref|XP_001766429.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162682338|gb|EDQ68757.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1343 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ IPL G GL L G N +V W+ Q ++R Sbjct: 756 RVAVWEFQSDNDIPLFLLTSQVGGLGLTLT-GANRVVIVDPAWNPSTDNQSVDR-----A 809 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G K+ V VY L+ TI+E + ++ K + Sbjct: 810 YRIGQKKNVVVYRLMTCGTIEEKIYRKQVFKGHLMK 845 >gi|23193481|gb|AAN14535.1|AF459085_1 SNF2P [Hordeum vulgare] Length = 882 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 77/231 (33%), Gaps = 41/231 (17%) Query: 2 KQY-HKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEV 51 K Y ++EL G + + + V+ + + + EE Sbjct: 303 KIYLSVLRKELQTLLSFTGGSSRHQSLQNIVVQLRKACSHPYLFSGIEPEPYEEGEHLVQ 362 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------------ 97 K+ L++++EK + +++ L LQ + Sbjct: 363 ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLDGSVRAEERFA 422 Query: 98 ----------PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +++ N + + G GLNL G + ++F+ W+ + Sbjct: 423 AIRNFSSQATKGVVRDDNNPSGAFVFMISTRAGGVGLNL-IGADTVIFYEQDWNPQA--- 478 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ + R + G V L++Q TI+E++++R K + + Sbjct: 479 --DKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGD 527 >gi|156058402|ref|XP_001595124.1| hypothetical protein SS1G_03212 [Sclerotinia sclerotiorum 1980] gi|154701000|gb|EDO00739.1| hypothetical protein SS1G_03212 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1142 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 58/163 (35%), Gaps = 19/163 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW- 104 + L+ + +++ + +V F S L+ ++ + ++ Sbjct: 978 LTNLKTLRKESPSTKSVVFSQFTSFLSLIEPALTRSSIPFLRLDGSMAQKARAAVLTQFK 1037 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N K +L + G GLNL + WW +E + R + G Sbjct: 1038 NSEKGVVLLLSLRAGGVGLNLT-MAKRVFMMDPWWSFA-----VEAQAIDRVHRMGQVDE 1091 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDL--LLNALKKETIHV 205 V V I + +++E +L+ K I +++ +K+ + Sbjct: 1092 VLVKRFIVKGSVEERMLRVQERKKFIASSLGMMSDEEKKLQRI 1134 Score = 35.1 bits (79), Expect = 6.2, Method: Composition-based stats. Identities = 3/51 (5%), Positives = 16/51 (31%), Gaps = 6/51 (11%) Query: 2 KQYHKF----QRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEEK 46 + Y +R +++ + + ++ ++ Q + + Sbjct: 780 EVYDHIFTRAKRTFSANIEAGTVLKAYTSIFAQILRLRQSCCHPILTRNQT 830 >gi|171685718|ref|XP_001907800.1| hypothetical protein [Podospora anserina S mat+] gi|170942820|emb|CAP68473.1| unnamed protein product [Podospora anserina S mat+] Length = 1877 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 10/192 (5%) Query: 9 RELYCDLQGENIEAFNSASKT---VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + + + E I + S+ C + N A Y + + + + +I Sbjct: 1221 KSGKSEDEDELILPQDILSELLTPTTCRDIDNDAHSYKIVALMFLLGEFRKVGDKALIFT 1280 Query: 66 ANAAPI-IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + + + F Q+ + + + + + G GLN Sbjct: 1281 QSIPALDFLESIFKRRQIGYQRLDGHTPINTRQASIKKFNSNDSADVYLISTKAGGVGLN 1340 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 + YG N ++ + + Q + R + G + V+VY+L+ T + + + Sbjct: 1341 I-YGANRVIILDFKYSPTDEQ-----QAIGRAYRLGQTKPVYVYWLMIGGTFEATIHKSA 1394 Query: 185 RTKSTIQDLLLN 196 K+ + +++ Sbjct: 1395 IFKTQLASRVID 1406 >gi|156348349|ref|XP_001621816.1| hypothetical protein NEMVEDRAFT_v1g1681 [Nematostella vectensis] gi|156208092|gb|EDO29716.1| predicted protein [Nematostella vectensis] Length = 147 Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 17/134 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLFAHP 116 +++ + S L + T ++ + L F Sbjct: 20 KQKVLIFSSYTSHLKIYTDWCDKNNTPYSLLTGSTKIADRESEVANFQKDDNKLLFFISL 79 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNL + ++ WW+ E + R + G + V V IA++TI Sbjct: 80 KAGGTGLNLTK-ASYVILLDPWWNP-----FAELQAIGRAHRIGQENQVNVVRFIAKDTI 133 Query: 177 DELVLQRLRTKSTI 190 +E + Q ++K I Sbjct: 134 EEKISQLQQSKKEI 147 >gi|241554086|ref|YP_002979299.1| helicase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863392|gb|ACS61054.1| helicase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 493 Score = 75.2 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 79/201 (39%), Gaps = 24/201 (11%) Query: 2 KQYHKFQRELYCDLQGENI----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y +F+ EL + + +A + + ++ +Q+A+ D+ K++ Sbjct: 262 EIYAQFRDELAAIVVRQGRPVLDDAEDILKRLLRLVQVASNPAMVDQAYRSVP---GKMR 318 Query: 58 ALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTIQEWN-E 106 AL+ ++ I+V +F + L + G + K + + + Sbjct: 319 ALDELVTSAIDAREKIVVWTNFTMNAEALCRHLGEFGAVLVHGGIEIAKREEALTAFKTD 378 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L A P + GL L N VF+ + L+++ Q +RI + + F Sbjct: 379 PQTRVLVATPGAAKEGLTLT-VANHAVFYDRSFSLDDYLQAQDRI-----HRISQDKPCF 432 Query: 167 VYYLIAQNTIDELVLQRLRTK 187 V LI +T+D V L K Sbjct: 433 VTNLIGMDTVDAWVDALLSAK 453 >gi|299746164|ref|XP_002911013.1| hypothetical protein CC1G_15553 [Coprinopsis cinerea okayama7#130] gi|298406931|gb|EFI27519.1| hypothetical protein CC1G_15553 [Coprinopsis cinerea okayama7#130] Length = 828 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 60/186 (32%), Gaps = 22/186 (11%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA-----PIIVAYHFNSDLAR------- 83 + + KI+ + ++ K + I+ F S L Sbjct: 627 CVDLAKQARQAELERPTSAKIRMVLKLLAKIDRDSNGEEKTIIFSQFTSMLDLIQPFLEE 686 Query: 84 ----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + D++ + N ++ + GLNL N ++ LWW Sbjct: 687 KGIKYTRYDGSMAPKDREAALEKIRNSKSTRVILISFKAGSTGLNLTA-CNNVILVDLWW 745 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + E R + G KR V++Y L T+++ +L K + L+ K Sbjct: 746 NPAL-----EDQAFDRAHRYGQKRDVYIYKLKVDATVEDRILALQDKKRALAAAALSGDK 800 Query: 200 KETIHV 205 + + + Sbjct: 801 IKNMRL 806 >gi|299756086|ref|XP_001829080.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130] gi|298411516|gb|EAU92715.2| DNA repair protein RAD5 [Coprinopsis cinerea okayama7#130] Length = 1494 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 56/147 (38%), Gaps = 19/147 (12%) Query: 70 PIIVAYHFNSDLARLQK-------AFPQGRTLDKDPCTIQEWN----EGKIPLLFAHPAS 118 +V + + L +++ + + K I+ + + +L + Sbjct: 1111 KTVVFSQWTTMLDKVEDALEVAGIRYDRLDGTMKREERIKAMDALKFDPGCEVLLVSLKA 1170 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + +W+ Q ++RI + G R V LI + +I+ Sbjct: 1171 GGVGLNLTA-AQRVYLMDPYWNPAVENQAVDRI-----HRLGQTRPVQTVKLIIEGSIEA 1224 Query: 179 LVLQRLRTKSTIQDLLL--NALKKETI 203 +L+ + K+ + ++ L N K E + Sbjct: 1225 RLLEVQKKKTELANMTLGQNVSKSEIL 1251 >gi|170585466|ref|XP_001897504.1| SNF2 family N-terminal domain containing protein [Brugia malayi] gi|158595051|gb|EDP33626.1| SNF2 family N-terminal domain containing protein [Brugia malayi] Length = 1327 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 9/118 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R K ++N+ L+ + G N+ N +V F W Sbjct: 978 RDYMVIDGQVQTSKRHEIQTKFNDPNNLRSRLMLISTRAGSLGTNMVA-ANRVVIFDACW 1036 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G + V++Y IAQ T++E + +R TK + +++ Sbjct: 1037 NPSH-----DTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDE 1089 >gi|145475913|ref|XP_001423979.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124391041|emb|CAK56581.1| unnamed protein product [Paramecium tetraurelia] Length = 1079 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 18/170 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL----------QKA 87 K K+ L +I K + II+ L Sbjct: 755 RMLFPNKKLLIYDCGKMNTLVSLIYKLKSQNHKIIIFTQMTKMLDIFEAVLSLSKISYLR 814 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ ++ +N+ I + S G GLNL G + ++F+ W+ Sbjct: 815 LDGSTPVEMRQKIVESFNQLNITCFISSTRSGGIGLNLT-GADTVIFYDTDWNPA----- 868 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +++ R + G R V +Y LI +TI+E + + K + D ++ + Sbjct: 869 MDKQAQDRCHRIGQVRPVTIYRLITNSTIEENIFLKSLQKRQLDDFVMQS 918 >gi|319642264|ref|ZP_07996923.1| helicase domain-containing protein [Bacteroides sp. 3_1_40A] gi|317386120|gb|EFV67040.1| helicase domain-containing protein [Bacteroides sp. 3_1_40A] Length = 559 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 21/207 (10%) Query: 2 KQYHKFQRELYCDL------QGENIEAF---NSASKTVKCLQLANGAVYYDEEKHWKEVH 52 K+Y +R+L L E IE + Q++ + V Sbjct: 342 KEYIDAERDLIMYLQKYKEADDEKIEKALRGEVMVRINILRQIS---ARGKVRDVIEFVK 398 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 D + ++I+ + V S + +K N K ++ Sbjct: 399 DFRENGKKIILFCSLHE---VVDQLKSYFPTAVSVTGRDSQDEKQRAVDSFQNNPKTDII 455 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GL L N + F W + Q +R + G K +V YY + Sbjct: 456 ICSIKAAGVGLTLTASSN-VAFVEFPWTYADCCQCEDR-----AHRIGQKDSVTCYYFLG 509 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 + TIDE V + ++ K I + + + Sbjct: 510 RRTIDEKVCRIIQNKKAIAKDVTGSTE 536 >gi|115438126|ref|XP_001217986.1| predicted protein [Aspergillus terreus NIH2624] gi|114188801|gb|EAU30501.1| predicted protein [Aspergillus terreus NIH2624] Length = 1735 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 49/125 (39%), Gaps = 9/125 (7%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 R + +++N + + + + G GLN+ G N ++ + + Sbjct: 1379 NRKYCRLDGKTPVVSRQAATKKFNTDANLEVYLISTRAGGLGLNI-PGANRVIIYDFSFS 1437 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 E + R + G + V+VY I+ T +E++ + K+ + +++ KK Sbjct: 1438 P-----FWEEQAIGRAYRLGQVKPVYVYRFISGGTFEEVMYNKALFKTQLAHRVVD--KK 1490 Query: 201 ETIHV 205 I + Sbjct: 1491 NPIRL 1495 >gi|50311677|ref|XP_455865.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|74689997|sp|Q6CJM4|RAD5_KLULA RecName: Full=DNA repair protein RAD5 gi|49645001|emb|CAG98573.1| KLLA0F17479p [Kluyveromyces lactis] Length = 1114 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 24/166 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT--------------LDKDP 98 ++ L+ I E + IIV F+S L L+ + + Sbjct: 942 KALLRHLKQIQETSPGEQIIVFSQFSSFLDILEIELRSHLPRDQVIIYKFDGRLDMKERT 1001 Query: 99 CTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++++++ I LL + G GLNL + WW Q I+RI Sbjct: 1002 RILEQFHDKDLSCIKLLLLSLKTGGVGLNLT-CASRAFMMDPWWSPGMEDQAIDRI---- 1056 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G ++ V V I N+++E +L+ K + D ++ + E Sbjct: 1057 -HRIGQQQTVKVVRFIIDNSVEEKMLRIQERKRMLGD-IVEGDEAE 1100 >gi|313231009|emb|CBY19007.1| unnamed protein product [Oikopleura dioica] Length = 1011 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 73/216 (33%), Gaps = 35/216 (16%) Query: 10 ELYCDLQGENIEAFNSASKTV-KCLQLANGAVYYDEEKHWKEVHDEKIKALEVII----- 63 + + +LQ + +S + + + + +N A + E + + I Sbjct: 237 KNFKELQKGAHGSKSSFTNIMIELKKCSNHAWLVKDPDDIDEFDQKSTEEKIDRILKGSG 296 Query: 64 -----------EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQ 102 K N + +++ L + R + +++ Sbjct: 297 KMMLLDKLLRRLKENGSRVLIFSQMVMMLDVISDYMALRRYQFQRLDGSTRGDLRQRSME 356 Query: 103 EWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G G+NL + ++ F W+ + + R + G Sbjct: 357 HFNAPNSTDFAFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQARAHRIG 410 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 K+ V +Y ++ +++E V++R + K + L++ Sbjct: 411 QKKTVKIYRFVSAMSVEEDVIERAKKKMVLDHLVIQ 446 >gi|294631185|ref|ZP_06709745.1| SNF2 domain-containing protein [Streptomyces sp. e14] gi|292834518|gb|EFF92867.1| SNF2 domain-containing protein [Streptomyces sp. e14] Length = 730 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 23/159 (14%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR--------------TLD 95 K+ L I+ + N +V HF L + +A Sbjct: 527 KSAKLDRLREIVREAAENGRKTVVFSHFKDVLGVVGEALAPAPGGSVPVFGPLTGAVPAA 586 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + ++ + P +L A + G GLNLQ +++V Q V Sbjct: 587 RRQRIVDDFGGVRGPAVLLAQIQAAGVGLNLQA-ASVVVLCEPQVKPTAEQ-----QAVA 640 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G R V V+ L+A +DE +++ L KS + D Sbjct: 641 RAHRMGQIRPVRVHRLLATGGVDERLVRLLERKSRLFDA 679 >gi|170085493|ref|XP_001873970.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] gi|164651522|gb|EDR15762.1| SNF2 family DNA-dependent ATPase [Laccaria bicolor S238N-H82] Length = 1313 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 17/138 (12%) Query: 70 PIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 +V + + L R + + D+ + +L + Sbjct: 1148 KTVVFSQWTTMLDKIEDALEVAGIRYDRLDGTMKRDDRTKAMDALKTDPGCEVLLVSLKA 1207 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + +W+ Q ++RI + G R V LI +N+I+ Sbjct: 1208 GGVGLNLTA-AQRVYLMDPYWNPAVENQAVDRI-----HRLGQTRPVTTVKLIIENSIEA 1261 Query: 179 LVLQRLRTKSTIQDLLLN 196 +L+ + K+ + ++ L Sbjct: 1262 RLLEVQKKKTALANMTLG 1279 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 19/68 (27%), Gaps = 6/68 (8%) Query: 2 KQYHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 + Y +F E + K ++ Q+ + + +E H + Sbjct: 878 EIYDQFFNESKAEFNDLSTKNEVMKNYVGILQKILRLRQICDHFELVQGKSVTREDHGQD 937 Query: 56 IKALEVII 63 A + Sbjct: 938 ATAACEDL 945 >gi|115647222|ref|XP_797049.2| PREDICTED: similar to MGC108253 protein, partial [Strongylocentrotus purpuratus] Length = 1279 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 70/185 (37%), Gaps = 21/185 (11%) Query: 32 CLQLANGAVYYDEEKHWKEV--HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA 87 +L + E + +++ K + L+ ++ K + +++ F L +Q+ Sbjct: 1097 LHRLCHEYSGLREYRLDQDLVTQSGKFQLLDKMLADLKEQGSRVLLFSQFVMVLDIVQEY 1156 Query: 88 ----------FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + I ++N + + + G G+NL N ++ Sbjct: 1157 LKIRGHKFVRMDGQTPVAERAQLIDKFNKNDSVFIFMLSTRAGGVGINLTA-ANTVILHD 1215 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++ ++ R + G R V V L+++ TI+E +L + K ++ + + Sbjct: 1216 IDFNP-----YNDKQAEDRCHRVGQTREVSVIRLVSKQTIEEGMLSCAKYKLKLEKQMTS 1270 Query: 197 ALKKE 201 + E Sbjct: 1271 GISGE 1275 >gi|226311883|ref|YP_002771777.1| hypothetical protein BBR47_22960 [Brevibacillus brevis NBRC 100599] gi|226094831|dbj|BAH43273.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 568 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 14/175 (8%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 Q+ + + ++++D+ II A + D Sbjct: 349 QILELVEMIKQIETHSKAAKTVELIQQINDKV------IIFTEYRATQNYLQKYLHDHGI 402 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + +L A + G G+NLQ+ N ++ + + W+ Sbjct: 403 TSVPFRGGFKRSKKDWMTDLFQN-RAQVLIAT-EAGGEGINLQF-CNQVINYDMPWNPMR 459 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +Q I R+ + G KR V +Y L TI+E +L+ L K + ++++ L Sbjct: 460 VEQRIGRV-----HRLGQKRDVHIYNLSTTGTIEEHILKLLYEKIDLFEMVIGEL 509 >gi|158288154|ref|XP_310015.4| AGAP009344-PA [Anopheles gambiae str. PEST] gi|157019247|gb|EAA05751.4| AGAP009344-PA [Anopheles gambiae str. PEST] Length = 961 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 62/186 (33%), Gaps = 45/186 (24%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDK------------ 96 K+ L I++ N +++ F S L ++ + ++ Sbjct: 676 FPSNKLWILFEILKHCNERGEKVLIFTAFVSVLNMVEHFMAKIHHQEENPQLSDAYAYSA 735 Query: 97 ----------------------DPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNI 131 I +N+ + + G G+NL G N Sbjct: 736 FKGPWEPGKDYYRLDGKTQKSIRHQMITSFNDPQNKRTKCFLISAKAGGQGINLT-GANR 794 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ W+ QQ I RI + G KR +VY LIA T++E V R TK + Sbjct: 795 VIILDTSWNPSNDQQNIFRI-----FRLGQKRKCYVYRLIAAGTMEEKVYSRSVTKQALS 849 Query: 192 DLLLNA 197 +++ Sbjct: 850 FRVVDE 855 >gi|66771903|gb|AAY55263.1| IP13006p [Drosophila melanogaster] Length = 726 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 7/118 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 DL+ F T + ++++N + +L + G GLNL N ++ L Sbjct: 589 QDLSWETLDFNGQLTAKEREIVLRDFNANNEKRVLLLSLTAGGVGLNL-NVANHMLIVDL 647 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + ER R + G + F+Y + Q+T+++ + K I ++L Sbjct: 648 HWNPQL-----ERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVL 700 Score = 37.8 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 11/41 (26%), Gaps = 1/41 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 + Y +F + GE I ++ Q Sbjct: 397 EIYERFLK-SLGYNPGEKILGIYILVLLLRLRQFCCHPGLM 436 >gi|74692796|sp|Q753V5|RAD5_ASHGO RecName: Full=DNA repair protein RAD5 Length = 1085 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 8/120 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 F SD+ + K + ++ + + + +L + G GLNL + Sbjct: 952 FASDICEIYKFDGRLDLKERSNVLAKFTEKSLVKMKVLLLSLKAGGVGLNLT-CASHAFI 1010 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW +E + R + G V +Y I +N+I+E +L+ K ++ + + Sbjct: 1011 MDPWWSPG-----MEDQAMDRIHRIGQSNTVKIYRFIVENSIEEKMLRIQEKKRSLGEFV 1065 >gi|302308737|ref|NP_985767.2| AFR220Wp [Ashbya gossypii ATCC 10895] gi|299790770|gb|AAS53591.2| AFR220Wp [Ashbya gossypii ATCC 10895] Length = 1085 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 8/120 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 F SD+ + K + ++ + + + +L + G GLNL + Sbjct: 952 FASDICEIYKFDGRLDLKERSNVLAKFTEKSLVKMKVLLLSLKAGGVGLNLT-CASHAFI 1010 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW +E + R + G V +Y I +N+I+E +L+ K ++ + + Sbjct: 1011 MDPWWSPG-----MEDQAMDRIHRIGQSNTVKIYRFIVENSIEEKMLRIQEKKRSLGEFV 1065 >gi|154310570|ref|XP_001554616.1| hypothetical protein BC1G_06759 [Botryotinia fuckeliana B05.10] gi|150851299|gb|EDN26492.1| hypothetical protein BC1G_06759 [Botryotinia fuckeliana B05.10] Length = 1142 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 58/163 (35%), Gaps = 19/163 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + L+ I +++ + +V F S L+ ++ + + Sbjct: 978 LSNLKSIRKESPSMKSVVFSQFTSFLSLIEPALARSSIPFLRLDGSMPQKARAAVLARYK 1037 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + G+ +L + G GLNL + WW +E + R + G Sbjct: 1038 DSGEGIVLLLSLRAGGVGLNLT-MAKRVFMMDPWWSFA-----VEAQAIDRVHRMGQVGE 1091 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDL--LLNALKKETIHV 205 V V I + +++E +L+ K I +++ +K+ + Sbjct: 1092 VVVKRFIVKGSVEERMLRVQERKKFIASSLGMMSDEEKKLQRI 1134 Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 3/50 (6%), Positives = 16/50 (32%), Gaps = 6/50 (12%) Query: 2 KQYHKF----QRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDEE 45 + Y +R +++ + + ++ ++ Q + + Sbjct: 780 EVYDHIFTRAKRTFSANIEAGTVLKAYTSIFAQILRLRQSCCHPILTRNQ 829 >gi|50555271|ref|XP_505044.1| YALI0F05698p [Yarrowia lipolytica] gi|74632870|sp|Q6C2R8|RAD5_YARLI RecName: Full=DNA repair protein RAD5 gi|49650914|emb|CAG77851.1| YALI0F05698p [Yarrowia lipolytica] Length = 1025 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 66/186 (35%), Gaps = 26/186 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 +++ + + + K QL K K V + + II+ Sbjct: 845 KDIRLKKLSDRPRSSKLVALVSKLKQL---------PKDAKSVVFSQFTSYLDIIQTELR 895 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 I A+ F+ L+R + ++ + K +L + G GLNL Sbjct: 896 REKIQAFRFDGTLSRQ-----------QRTDVLKAFGLSKGSVLLISLKTGGVGLNLVT- 943 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N WW + Q I+RI + G + V V I +N+++E +L+ + K Sbjct: 944 ANHAFIMDPWWTFAQEAQAIDRI-----HRMGQTKDVHVTRFIVENSVEEKMLKIQQQKM 998 Query: 189 TIQDLL 194 + L Sbjct: 999 VLAGTL 1004 >gi|288927483|ref|ZP_06421330.1| helicase, Snf2 family [Prevotella sp. oral taxon 317 str. F0108] gi|288330317|gb|EFC68901.1| helicase, Snf2 family [Prevotella sp. oral taxon 317 str. F0108] Length = 859 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 19/193 (9%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 + + L + D++ + E I + +I ++ ++V + Sbjct: 418 SETDRNKLMKYLSQMRMLCDSTYILDQKTRFDTKVTEVINIVRNVI-ESGDEKLVVFSQW 476 Query: 78 NSDLARL----------QKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQ 126 + + G + + + + + + GLNLQ Sbjct: 477 ERMTRLVAKELEKEGIGFEYLHGGIPSIRRKDLVNNFMDEPHCRVFL-STDAGSTGLNLQ 535 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +++V L W+ +Q I R+ + G KR + V L++ T +E +L +L+ Sbjct: 536 A-ASVVVNVDLPWNPAVLEQRIARV-----YRLGQKRNIQVINLVSAGTFEEDMLDKLKF 589 Query: 187 KSTIQDLLLNALK 199 KS++ + +L+ + Sbjct: 590 KSSLFEGVLDGGE 602 >gi|300708940|ref|XP_002996640.1| hypothetical protein NCER_100233 [Nosema ceranae BRL01] gi|239605957|gb|EEQ82969.1| hypothetical protein NCER_100233 [Nosema ceranae BRL01] Length = 1262 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 61/178 (34%), Gaps = 20/178 (11%) Query: 35 LANGAVYYDEEKHWKEV-HDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKAFPQGR 92 +AN V +E + + K+ L+ ++ K +++ L L + + Sbjct: 649 IANNIVTDIDEYYKILIQSSGKLVLLDKLLNKLYGHHKVLIFSQMTKCLDLLGEYLAYKK 708 Query: 93 TLDKD----------PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I +++ + + G G+NL + ++ F W+ Sbjct: 709 YKFERIDGGVRGDHRQAAIDRFSDANSDGFVFLLCTRAGGVGINLTA-ADTVIIFDSDWN 767 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + + R + G V +Y L+ +NT + + + K + +L + Sbjct: 768 PQN-----DLQAQARCHRIGQTNEVKIYRLVTRNTYEREMFDKAGMKLGLDRAVLQKM 820 >gi|225557592|gb|EEH05878.1| transcription termination factor 2 [Ajellomyces capsulatus G186AR] Length = 1092 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 71/216 (32%), Gaps = 26/216 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y R Y Q + + K Q Y K + + +E Sbjct: 876 YTAITRRGYEKFQESQLSRREGPKQAKKFGQ------YEGPHTKTKALISHLLDTIEESK 929 Query: 64 --EKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEW-NEGKI 109 IV + S L ++ A TL + I + + + Sbjct: 930 KAPDEAPIKSIVFSSWTSHLDLIEIAMEDNGITTFTRLDGTMTLKQRNAAIDAFREDDNV 989 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G GLNL G+ + ++ Q ++R+ + G R V Sbjct: 990 TILLATLGAGGVGLNLTA-GSRVYIMEPQYNPAAIAQAVDRV-----HRLGQTREVTTIQ 1043 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I +++I+E + + R K + D+ LN K + + Sbjct: 1044 FIMKDSIEEKIAELARKKQQMADMSLNRGKLDRREL 1079 >gi|255594207|ref|XP_002536048.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223521096|gb|EEF26335.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 267 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 17/126 (13%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE-GKIPLLFAHPAS 118 IV + L L+ + ++++N ++ ++ + Sbjct: 132 KAIVFSQWTRMLDLLEACLKSSSVQYRRLDGTMSVVARDKAVKDFNTIPEVSVMIMSLKA 191 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLN+ ++ LWW+ E + R + G R V V+ L ++T+++ Sbjct: 192 ASLGLNMVAAC-RVLLLDLWWNPTT-----EDQAIDRAHRIGQTRPVTVFRLTVKDTVED 245 Query: 179 LVLQRL 184 +L Sbjct: 246 RILALQ 251 >gi|315048349|ref|XP_003173549.1| DNA repair protein RAD5 [Arthroderma gypseum CBS 118893] gi|311341516|gb|EFR00719.1| DNA repair protein RAD5 [Arthroderma gypseum CBS 118893] Length = 922 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 20/169 (11%) Query: 43 DEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA-----------F 88 +E + KI+AL I+ +A +V + S L ++ Sbjct: 739 NEIDVESDSSSSKIQALIKILTAKGQAAGTKTVVFSQWTSFLDLIEPQLALNNIKFARID 798 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + +D + ++ + ++ A C GLNL N ++ WW I Sbjct: 799 GKMNSSKRDAAMSKLTHDPECSVMLASLNVCSVGLNLVA-ANQVILADSWWAPA-----I 852 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E V R + G +RA ++ L+ +N+I++ VL + K + Sbjct: 853 EDQAVDRVYRLGQQRATTIWRLVMENSIEDRVLDIQKEKRELMTTAFQE 901 Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats. Identities = 3/30 (10%), Positives = 10/30 (33%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEE 45 +G+ + ++ Q+ N + Sbjct: 613 KGKKTTYSHVLEVLLRLRQVCNHWKLCHDR 642 >gi|82596119|ref|XP_726130.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23481408|gb|EAA17695.1| SNF2 family N-terminal domain, putative [Plasmodium yoelii yoelii] Length = 1312 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 48/129 (37%), Gaps = 8/129 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + I+E+N + + + G G+NL N ++ Sbjct: 1160 YCKYRCWKYMRLDGSTNKLIRELDIREFNLSDSIYFIYLISTRAGGLGINLTA-ANHVIM 1218 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ I+ + R + G KR V V+ L+ + T++E + R K + L+ Sbjct: 1219 YDEDWNP-----FIDLQAIDRAHRIGQKREVNVWKLMTEWTVEERMAFRREQKLKLDKLV 1273 Query: 195 LNALKKETI 203 + + E + Sbjct: 1274 VQTQEDEDM 1282 >gi|320580035|gb|EFW94258.1| DNA helicase [Pichia angusta DL-1] Length = 395 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 65/166 (39%), Gaps = 23/166 (13%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK------------DPCT 100 + + L+ I E+ +IV F S L ++K + Sbjct: 223 NALLSHLQQIYEENPGDHVIVFSQFTSFLDLVEKELKSYTCNFRILKFDGRLNVDQRQRA 282 Query: 101 IQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+N +G+I +L + G GLNL + W+ Q I+RI Sbjct: 283 LNEFNTKTTDGRITILLISLKAGGVGLNLT-IASKAFLLDPHWNNATEFQAIDRI----- 336 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL-LNALKKE 201 + G ++V V I + +I+E +L+ K+ + + L +N ++ Sbjct: 337 HRVGQSKSVKVVRFIMEGSIEERMLKIQERKNQLGEALSMNDEERR 382 >gi|148682121|gb|EDL14068.1| alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Mus musculus] Length = 2429 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 25/201 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI------ 62 ++ D E +E + L++A +E V + + +L++I Sbjct: 1939 KDFVTDTDAEVLEHSGKMVLLFEILRMA------EEIGDKVLVFSQSLISLDLIEDFLEL 1992 Query: 63 ----IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAH 115 + P+I +E+N+ L Sbjct: 1993 ASREKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIIS 2052 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL N ++ F W+ + + R + G + V+VY +AQ T Sbjct: 2053 TKAGSLGINLVA-ANRVIIFDASWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGT 2106 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ + R TK ++ +++ Sbjct: 2107 MEDKIYDRQVTKQSLSFRVVD 2127 >gi|46487453|gb|AAS99124.1| alpha thalassaemia mental retardation X-linked protein [Macropus eugenii] Length = 2464 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 9/120 (7%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFS 136 T +E+N+ L + G+NL N ++ F Sbjct: 2049 FRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFD 2107 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2108 ASWNPS-----YDIQSIFRVYRFGQNKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2162 >gi|209876065|ref|XP_002139475.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209555081|gb|EEA05126.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1923 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 66/171 (38%), Gaps = 18/171 (10%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK----- 96 DE E ++ K + L+ ++ +++ F L +G + Sbjct: 789 DEVIENTEENNYKSEKLDKPKKRCRMHKVLIFTQFQLILDELENYCLWRGWQYMRLDGST 848 Query: 97 ----DPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I+E+ + + + + G G+NL N +V + W+ ++ Sbjct: 849 NKLIRELDIREFGLPDNYVFIYLICTRAGGLGINLVS-ANHVVMYDEDWNP-----FVDL 902 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V R + G R V ++ L+ + +++E ++ K + +++ A ++E Sbjct: 903 QAVDRAHRIGQTRDVCIWKLVTEWSVEERMVFGREQKLKLDKMVIKAREEE 953 >gi|300796173|ref|NP_001179215.1| helicase-like transcription factor [Bos taurus] gi|297471227|ref|XP_002685073.1| PREDICTED: helicase-like transcription factor [Bos taurus] gi|296491102|gb|DAA33185.1| helicase-like transcription factor [Bos taurus] Length = 1009 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 19/177 (10%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG---- 91 N + E + + AL + +K +V F + L+ ++ Sbjct: 819 CNTEKKSNMEWTSSSKINALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVF 878 Query: 92 ------RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 K +IQ + G ++ + G GLNL + + W+ Sbjct: 879 TRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPA 937 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q +R + G K+ V + I +++++E +L+ TK + K Sbjct: 938 AEDQCFDRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKK 989 Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 11/43 (25%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYC----DLQGENIEA--FNSASKTVKCLQLANG 38 K Y + E + A + ++ Q+ Sbjct: 676 KIYQSVKNEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 718 >gi|14548140|gb|AAK66797.1|U40238_20 SWI/SNF family helicase [uncultured crenarchaeote 4B7] Length = 570 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 6/141 (4%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I +E + I + +S + G+T I + +G+ L+ A Sbjct: 409 IMEIEESVVVFCHHKAIHSLLHHSLSDYDPASIIGGQTDVVRQREIDRFQKGQTKLMIAG 468 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL ++F L W I R R + G K VF YYL+ + T Sbjct: 469 LRAGNVGINLTT-AKYVIFAELDWSPA-----IHRQAEDRLHRIGQKNTVFAYYLVGKGT 522 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +DE V + L KS D +L+ Sbjct: 523 LDEHVAEILVDKSYEIDTILD 543 >gi|154091016|ref|NP_033556.2| transcriptional regulator ATRX [Mus musculus] gi|123121759|emb|CAM16251.1| alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Mus musculus] gi|123294232|emb|CAM19070.1| alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Mus musculus] Length = 2476 Score = 75.2 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 25/201 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI------ 62 ++ D E +E + L++A +E V + + +L++I Sbjct: 1986 KDFVTDTDAEVLEHSGKMVLLFEILRMA------EEIGDKVLVFSQSLISLDLIEDFLEL 2039 Query: 63 ----IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAH 115 + P+I +E+N+ L Sbjct: 2040 ASREKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIIS 2099 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL N ++ F W+ + + R + G + V+VY +AQ T Sbjct: 2100 TKAGSLGINLVA-ANRVIIFDASWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGT 2153 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ + R TK ++ +++ Sbjct: 2154 MEDKIYDRQVTKQSLSFRVVD 2174 >gi|83769647|dbj|BAE59782.1| unnamed protein product [Aspergillus oryzae] Length = 1100 Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + I +L A + G GLNL + + ++ Q ++R+ Sbjct: 984 RQKALQEFHDNNDITILLATIGAGGVGLNLTS-ASRVYIMEPQYNPAAVAQAVDRV---- 1038 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G R V + +++I+E + + + K + D+ +N K + V Sbjct: 1039 -HRIGQTREVTTVQFLMKDSIEEKIFELAKKKQQLADMSMNQRKLDKREV 1087 >gi|5915738|sp|Q61687|ATRX_MOUSE RecName: Full=Transcriptional regulator ATRX; AltName: Full=ATP-dependent helicase ATRX; AltName: Full=HP1 alpha-interacting protein; AltName: Full=HP1-BP38 protein; AltName: Full=Heterochromatin protein 2; AltName: Full=X-linked nuclear protein gi|3002558|gb|AAC08741.1| ATRX protein [Mus musculus] Length = 2476 Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 25/201 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI------ 62 ++ D E +E + L++A +E V + + +L++I Sbjct: 1986 KDFVTDTDAEVLEHSGKMVLLFEILRMA------EEIGDKVLVFSQSLISLDLIEDFLEL 2039 Query: 63 ----IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAH 115 + P+I +E+N+ L Sbjct: 2040 ASREKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIIS 2099 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL N ++ F W+ + + R + G + V+VY +AQ T Sbjct: 2100 TKAGSLGINLVA-ANRVIIFDASWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGT 2153 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ + R TK ++ +++ Sbjct: 2154 MEDKIYDRQVTKQSLSFRVVD 2174 >gi|221052138|ref|XP_002257645.1| DNA repair protein rad54 [Plasmodium knowlesi strain H] gi|193807475|emb|CAQ37981.1| DNA repair protein rad54, putative [Plasmodium knowlesi strain H] Length = 1052 Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 58/151 (38%), Gaps = 17/151 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW- 104 + L I++ +++ ++ L ++ + G + K I ++ Sbjct: 549 LHFLLKTIKQNTTDKVVIVSNYTQTLDYMEILCRENSYKFVRLDGGINIKKRHKVINDFT 608 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + I + S G G+NL N LV W+ ++ + R + G K+ Sbjct: 609 HSNDIFIFLLSSKSGGCGINL-ISSNRLVLLDPDWNPAN-----DKQALARVWREGQKKI 662 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++Y TIDE V QR +K + +++ Sbjct: 663 CYIYRFFCTGTIDEKVYQRQISKDGLSSMIV 693 >gi|45357049|gb|AAS58478.1| SNF2P [Hordeum vulgare subsp. vulgare] Length = 882 Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 77/231 (33%), Gaps = 41/231 (17%) Query: 2 KQY-HKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEV 51 K Y ++EL G + + + V+ + + + EE Sbjct: 303 KIYLSVLRKELQTLLSFTGGSSRHQSLQNIVVQLRKACSHPYLFSGIEPEPYEEGEHLVQ 362 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------------ 97 K+ L++++EK + +++ L LQ + Sbjct: 363 ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLDGSVRAEERFA 422 Query: 98 ----------PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +++ N + + G GLNL G + ++F+ W+ + Sbjct: 423 AIRNFSSQPTKGVVRDDNNPSGAFIFMISTRAGGVGLNL-IGADTVIFYEQDWNPQA--- 478 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ + R + G V L++Q TI+E++++R K + + Sbjct: 479 --DKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGD 527 >gi|169790814|ref|NP_001013626.2| RAD26L hypothetical protein isoform 1 [Mus musculus] Length = 1537 Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 507 KMKVLQQLLNHFRKQRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 551 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N+++ F W+ Sbjct: 552 LDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPAN--- 607 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 608 --DLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 660 >gi|215254414|gb|ACJ64199.1| SNF2P [Triticum turgidum] Length = 882 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 77/231 (33%), Gaps = 41/231 (17%) Query: 2 KQY-HKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEV 51 K Y ++EL G + + + V+ + + + EE Sbjct: 303 KIYLSVLRKELQTLLSFTGGSSRHQSLQNIVVQLQKACSHPYLFSGIEPEPYEEGEHLVQ 362 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPC 99 K+ L++++EK + +++ L + ++ Sbjct: 363 ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLDGSVRAEERFA 422 Query: 100 TIQEW-------------NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I+ + N + + G GLNL G + ++F+ W+ + Sbjct: 423 AIRNFSSQPTKGGVRDDSNPSGAFVFMVSTRAGGVGLNL-IGADTVIFYEQDWNPQA--- 478 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ + R + G V L++Q TI+E++++R K + + Sbjct: 479 --DKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFED 527 >gi|330960628|gb|EGH60888.1| Non-specific serine/threonine protein kinase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 610 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 68/199 (34%), Gaps = 36/199 (18%) Query: 25 SASKTVKCLQLANGAVY---------------YDEEKHWKEVHDEKIKALEVIIEK--AN 67 + T++ + + K+ II + + Sbjct: 394 ALVATLQLQLVCAHPWLIKKFSSDVDVDADDASINYGGTSPLMTPKMDRAISIIVEAFFS 453 Query: 68 AAPIIVAYHFNSDLARLQKA------------FPQGRTLDKDPCTIQEWNE-GKIPLLFA 114 +++ FN ++KA + + +++E G L Sbjct: 454 GKKVLLFSVFNKVEFLIKKALSSYPKSFFWGAINGSTPPEDRQSIVDKFSEFGGAGCLIL 513 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 +P + G GLN+ +++ F+ W+ E R + G + V +Y+L ++ Sbjct: 514 NPKAAGAGLNITA-ATVVIHFTPVWNPAL-----ESQASARAHRRGQCQPVTIYHLFYKD 567 Query: 175 TIDELVLQRLRTKSTIQDL 193 T++E++++R K + + Sbjct: 568 TVEEVMVERSAWKRELANQ 586 >gi|229031878|ref|ZP_04187866.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH1271] gi|228729496|gb|EEL80485.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH1271] Length = 560 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ + +I F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|46123559|ref|XP_386333.1| hypothetical protein FG06157.1 [Gibberella zeae PH-1] Length = 1117 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 50/148 (33%), Gaps = 17/148 (11%) Query: 64 EKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEW-NEGKIPLL 112 +V + S L + + + + + + + ++ Sbjct: 956 PDEPPYKSVVFSGWTSHLDLIELALNANGIMFTRLDGSMSRTQRTIAMDRFREDNTVHVI 1015 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL GN + ++ Q I+R+ + G KR V I Sbjct: 1016 LVSIMAGGLGLNLTA-GNSVYVMEPQYNPAAEAQAIDRV-----HRLGQKRPVRTVRYIM 1069 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKK 200 +++ +E +L+ K + L ++ + Sbjct: 1070 RDSFEEKMLELQEKKRKLASLSMDGQNR 1097 >gi|82704891|ref|XP_726740.1| helicase [Plasmodium yoelii yoelii str. 17XNL] gi|23482279|gb|EAA18305.1| Helicase conserved C-terminal domain, putative [Plasmodium yoelii yoelii] Length = 1472 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 48/129 (37%), Gaps = 8/129 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + I+E+N + + + G G+NL N ++ Sbjct: 63 YCKYRCWKYMRLDGSTNKLIRELDIREFNLSDSIYFIYLISTRAGGLGINLTA-ANHVIM 121 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ I+ + R + G KR V V+ L+ + T++E + R K + L+ Sbjct: 122 YDEDWNP-----FIDLQAIDRAHRIGQKREVNVWKLMTEWTVEERMAFRREQKLKLDKLV 176 Query: 195 LNALKKETI 203 + + E + Sbjct: 177 VQTQEDEDM 185 >gi|293342563|ref|XP_002725263.1| PREDICTED: similar to putative repair and recombination helicase RAD26L isoform 2 [Rattus norvegicus] gi|293354404|ref|XP_002728495.1| PREDICTED: RAD26L hypothetical protein isoform 1 [Rattus norvegicus] gi|149029138|gb|EDL84423.1| similar to putative repair and recombination helicase RAD26L (predicted), isoform CRA_b [Rattus norvegicus] Length = 1542 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 62/175 (35%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + + K K+ + A+ + Sbjct: 516 KMKVLDQLLNHFRKHRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 560 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N+++ F W+ Sbjct: 561 LDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNF-IGANVVILFDPTWNPAN--- 616 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + R + G R V V+ LI+ T++E++ R K + +++ + + Sbjct: 617 --DLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 669 >gi|154311656|ref|XP_001555157.1| hypothetical protein BC1G_06287 [Botryotinia fuckeliana B05.10] gi|150850798|gb|EDN25991.1| hypothetical protein BC1G_06287 [Botryotinia fuckeliana B05.10] Length = 1081 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 46/143 (32%), Gaps = 17/143 (11%) Query: 74 AYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 F + L ++ T + +I + + + + G Sbjct: 933 FSQFTTMLQLVEWRLRRAGITTVMLDGSMTPAQRQASINHFMTDVNVECFLVSLKAGGVA 992 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N + WW+ Q +R + G R + L +++++ ++ Sbjct: 993 LNLTE-ANKVFIVDPWWNPAAEWQSADRC-----HRIGQARPCSITRLCIEDSVESRMVL 1046 Query: 183 RLRTKSTIQDLLLNALKKETIHV 205 K+ + +NA + ++ Sbjct: 1047 LQEKKANMIHSTINADESAMENL 1069 >gi|125805885|ref|XP_693071.2| PREDICTED: helicase-like transcription factor-like [Danio rerio] gi|169158941|emb|CAQ15009.1| helicase-like transcription factor [Danio rerio] Length = 942 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 52/154 (33%), Gaps = 19/154 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK---------DPCTIQEWN 105 + L + + +V F L G + + I+++ Sbjct: 774 MSNLLKLRNEDPTVKSMVVSQFTGFLDVLEVALREYGFSFTRLDGSLIQRARAKAIEDFQ 833 Query: 106 E---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G ++ + G GLNL + + W+ Q ++R + G Sbjct: 834 DSTPGSPTIMLLSLKAGGVGLNLTA-ASQVFVMDPAWNPAAEDQCVDRC-----HRLGQS 887 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V + I +++++E +++ + K + D Sbjct: 888 RDVVITKFIVKDSVEENMVKIQKKKQELVDKAFG 921 Score = 35.9 bits (81), Expect = 3.8, Method: Composition-based stats. Identities = 6/54 (11%), Positives = 12/54 (22%), Gaps = 14/54 (25%) Query: 7 FQRELYCDLQGENIEAFN--------------SASKTVKCLQLANGAVYYDEEK 46 +RE Y ++GE + ++ Q Sbjct: 613 MEREKYERVKGEGKNIVGRYFQEGTFMANYADVLTILMRLRQCCCHPSLVGNYT 666 >gi|303285416|ref|XP_003061998.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226456409|gb|EEH53710.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 2365 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 8/115 (6%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA--HPASCGHGLNLQYGGNILVFFSLWWD 140 R + I +N + G GLNL + +V + ++ Sbjct: 1158 RAYGRICGRTMGAERQRVIDGFNAEGSHQFLMLVSTRAGGLGLNL-ATADTIVLYDPEFN 1216 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 IE+ +R + G KR V VY L+ +++E ++Q+ + K I+ L++ Sbjct: 1217 P-----FIEQQAQSRAHRMGQKREVAVYQLVTAGSVEERIVQKAKAKLAIERLVV 1266 >gi|156082193|ref|XP_001608585.1| DNA repair protein rhp54 [Plasmodium vivax SaI-1] gi|148801524|gb|EDL42923.1| DNA repair protein rhp54, putative [Plasmodium vivax] Length = 1064 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 62/164 (37%), Gaps = 17/164 (10%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GR 92 + + + L I++ +++ ++ L ++ + G Sbjct: 519 HRCYYNMSCKFQLLHFLLKTIKQNTTDKVVIVSNYTQTLDYMEILCKENFYKFVRLDGGI 578 Query: 93 TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ K I ++ + I + S G G+NL N L+ W+ ++ Sbjct: 579 SIKKRHKVISDFTHSSDIFIFLLSSKSGGCGINL-ISSNRLILLDPDWNPAN-----DKQ 632 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G K+ ++Y L TIDE V QR +K + +++ Sbjct: 633 ALARVWREGQKKICYIYRLFCTGTIDEKVYQRQISKDGLSSMIV 676 Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 19/68 (27%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y F ++ ++ N K ++ N + + H K +E Sbjct: 393 LYVLFLKDKRILKNEQSTNKVNVLINIKKLEKICNHPLLLNPNDMKDVGHVSLAKLIEDA 452 Query: 63 IEKANAAP 70 ++ Sbjct: 453 AKQHQGKR 460 >gi|268564201|ref|XP_002639041.1| C. briggsae CBR-XNP-1 protein [Caenorhabditis briggsae] gi|187022150|emb|CAP38921.1| CBR-XNP-1 protein [Caenorhabditis briggsae AF16] Length = 1333 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 63/201 (31%), Gaps = 30/201 (14%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 + ++ N + ++ +E V + ++ +I + Sbjct: 912 EEDKDDFSLSNKLVLLMAIIKKC------EEIGDKLLVFSQSLE-SLALIRRMLEYMAGT 964 Query: 74 AYHFNSDLA--------------RLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHP 116 F+ D K ++N+ + L+ Sbjct: 965 GQWFSDDHEALNAEGETWSWLEGEDYMTIDGSVQSVKRDAVQTQFNDPENLRARLMLIST 1024 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G N+ N +V F W+ + + R + G + V++Y IAQ T+ Sbjct: 1025 RAGSLGTNMVA-ANRVVIFDACWNPSH-----DTQSLFRVYRFGQTKPVYIYRFIAQGTM 1078 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E + +R TK + +++ Sbjct: 1079 EERIYKRQVTKESTSMRVVDE 1099 >gi|67523599|ref|XP_659859.1| hypothetical protein AN2255.2 [Aspergillus nidulans FGSC A4] gi|40744672|gb|EAA63828.1| hypothetical protein AN2255.2 [Aspergillus nidulans FGSC A4] gi|259487648|tpe|CBF86478.1| TPA: SNF2 family helicase/ATPase, putative (AFU_orthologue; AFUA_5G06600) [Aspergillus nidulans FGSC A4] Length = 1832 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 8/123 (6%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R +++N+G+ + + G GLN+ G N ++ F + Sbjct: 1388 NRQYSRLDGQTPAATRQAATKKFNQGEKQVYLISTRAGGLGLNIT-GANRVIIFDFSFSP 1446 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + E + R + G ++ VFVY IA T E++ ++ K+ + +++ K+ Sbjct: 1447 -----IWEEQAIGRAYRLGQQKPVFVYRFIAGGTFQEIIHEKATYKTQLAVRVVD--KRN 1499 Query: 202 TIH 204 I Sbjct: 1500 PIR 1502 >gi|46126713|ref|XP_387910.1| hypothetical protein FG07734.1 [Gibberella zeae PH-1] Length = 918 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 19/170 (11%), Positives = 45/170 (26%), Gaps = 17/170 (10%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KA 87 + ++ I +V + L ++ Sbjct: 727 DPAPPQLRTAAVAPPSKIRSLVDDIKLSPPETKCVVFSTWRLTLDLVKGVLDQEGIQSIR 786 Query: 88 FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 F ++ + + I ++ GL L W+ Sbjct: 787 FDGKVPQKDRQSVVKRFESDPNIRIMLLTLTCGAVGLTLTAAC-RAYLMEPHWNPTL--- 842 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 E + R + G + V L +++ +E V+ +K + +LL+ Sbjct: 843 --EEQALARIHRLGQTKNVTTIRLYIRDSFEEQVMNVQESKKQLAGVLLS 890 >gi|149245558|ref|XP_001527256.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146449650|gb|EDK43906.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 936 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 72/226 (31%), Gaps = 63/226 (27%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVII------------- 63 + V+ + N Y E H K +ALE I+ Sbjct: 595 RMVQLRNICNSPYLYYEPFPMDGEHDEQFMNRLVTNSCKFQALEQILLPLITNIEKEPTL 654 Query: 64 ---------------------EKANAAPIIVAYHFNSDLARLQKAFPQGR---------- 92 + ++ F + +Q Sbjct: 655 KTTTTTTRTAKTKSKKNKTGSVSSQNHKCLIFSQFTKVMDLIQDWLHFQNIKACRLDGLT 714 Query: 93 TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I ++N+ + + G G+NL G + ++ F W+ + ++ Sbjct: 715 PQEERAKQISQFNDSNSSYKVFLLSTRAGGLGINLT-GADTVILFDNDWNPQ-----MDL 768 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + V +Y + +++I+E+++ + +K ++ L++ Sbjct: 769 QAIDRVHRIGQTKPVKIYRFVVRDSIEEILIAKSSSKRFLEKLVIQ 814 >gi|119481535|ref|XP_001260796.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] gi|119408950|gb|EAW18899.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] Length = 1194 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 6/104 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ G +L A + G GLNL + + ++ Q I+R+ Sbjct: 1078 RNRALEDFHTNGNTTILLATIGAGGVGLNLTS-ASKVYIMEPQYNPAAVAQAIDRV---- 1132 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G R V I + +I+E + + + K + D+ +N K Sbjct: 1133 -HRLGQTREVTTVQFIMKGSIEEKIFELAKKKQQLADMSMNRGK 1175 >gi|281361297|ref|NP_649751.2| CG10445, isoform C [Drosophila melanogaster] gi|272476855|gb|AAF54166.2| CG10445, isoform C [Drosophila melanogaster] Length = 945 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 7/118 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 DL+ F T + ++++N + +L + G GLNL N ++ L Sbjct: 808 QDLSWETLDFNGQLTAKEREIVLRDFNANNEKRVLLLSLTAGGVGLNL-NVANHMLIVDL 866 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + ER R + G + F+Y + Q+T+++ + K I ++L Sbjct: 867 HWNPQL-----ERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIAKVVL 919 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 11/41 (26%), Gaps = 1/41 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 + Y +F + GE I ++ Q Sbjct: 616 EIYERFLK-SLGYNPGEKILGIYILVLLLRLRQFCCHPGLM 655 >gi|195498631|ref|XP_002096606.1| GE25760 [Drosophila yakuba] gi|194182707|gb|EDW96318.1| GE25760 [Drosophila yakuba] Length = 861 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 7/118 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 DL+ F + ++++N +L + G GLNL N ++ L Sbjct: 724 QDLSWETLDFNGQLSAKDRELVLRDFNAEPDKRVLLLSLTAGGVGLNL-NVANHMLIVDL 782 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + ER R + G + F+Y + Q+T+++ + K I +++ Sbjct: 783 HWNPQL-----ERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDFKLEIAKVVV 835 Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 11/38 (28%), Gaps = 1/38 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA 39 + Y +F + GE I ++ Q Sbjct: 530 EIYERFLK-SLGYNPGEKILGIYILVLLLRLRQFCCHP 566 >gi|126342606|ref|XP_001372327.1| PREDICTED: similar to alpha thalassaemia mental retardation X-linked protein [Monodelphis domestica] Length = 2447 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 9/120 (7%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFS 136 T +E+N+ L + G+NL N ++ F Sbjct: 2051 FRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFD 2109 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2110 ASWNPS-----YDIQSIFRVYRFGQNKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2164 >gi|326934975|ref|XP_003213557.1| PREDICTED: probable global transcription activator SNF2L2-like, partial [Meleagris gallopavo] Length = 232 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 59/159 (37%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K + L+ I+ K A +++ S + ++ F + Sbjct: 23 SGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAAL 82 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++++NE + + G GLNLQ + ++ F W+ + + R + Sbjct: 83 LKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQ-----DLQAQDRAHR 136 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V L N+++E +L + K + ++ A Sbjct: 137 IGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 175 >gi|154275030|ref|XP_001538366.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150414806|gb|EDN10168.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 1051 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 70/216 (32%), Gaps = 26/216 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y R Y Q + + K Q Y K + + +E Sbjct: 835 YTAITRRGYEKFQESQLSKRQGPKQAKKFGQ------YEGPHTKTKALISHLLDTIEESK 888 Query: 64 --EKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEW-NEGKI 109 IV + S L ++ A TL + I + + + Sbjct: 889 KAPDEAPIKSIVFSSWTSHLDLIEIAMEDNGITTFTRLDGTMTLKQRNAAIDAFREDDNV 948 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G GLNL G+ + ++ Q ++R+ + G R V Sbjct: 949 TILLATLGAGGVGLNLTA-GSRVYIMEPQYNPAAIAQAVDRV-----HRLGQTREVTTIQ 1002 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I +++I+E + + K + D+ LN K + + Sbjct: 1003 FIMKDSIEEKIAELAMKKQQMADMSLNRGKLDRREL 1038 >gi|28278128|gb|AAH45534.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Homo sapiens] gi|167773841|gb|ABZ92355.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [synthetic construct] gi|190690133|gb|ACE86841.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein [synthetic construct] gi|190691507|gb|ACE87528.1| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein [synthetic construct] Length = 1028 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 60/169 (35%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 841 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 900 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 901 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 955 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V LI+Q TI+E +L+ + K ++ + Sbjct: 956 -YNDKQAEDRCHRVGQTKEALVIKLISQGTIEESMLKINQQKLKLEQDM 1003 >gi|67600198|ref|XP_666342.1| SNF2 family N-terminal domain [Cryptosporidium hominis TU502] gi|54657319|gb|EAL36112.1| SNF2 family N-terminal domain [Cryptosporidium hominis] Length = 2142 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 55/152 (36%), Gaps = 18/152 (11%) Query: 65 KANAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK---------DPCTIQEW--NEGKIPLL 112 K I++ F L +G + I+E+ + + + Sbjct: 924 KCKMHKILIFTQFQLILDELENYCLWRGWQYMRLDGSTNKLIRELDIREFGLPDNYVLVY 983 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL N +V + W+ ++ V R + G R V ++ L+ Sbjct: 984 LICTRAGGLGINLVS-ANHVVMYDEDWNP-----FVDLQAVDRAHRIGQTRDVCIWKLVT 1037 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + +++E ++ K + +++ ++ H Sbjct: 1038 EWSVEERMVFGREQKLKLDKMIIKGSARDDNH 1069 >gi|74137169|dbj|BAE21982.1| unnamed protein product [Mus musculus] Length = 995 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 25/201 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI------ 62 ++ D E +E + L++A +E V + + +L++I Sbjct: 778 KDFVTDTDAEVLEHSGKMVLLFEILRMA------EEIGDKVLVFSQSLISLDLIEDFLEL 831 Query: 63 ----IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAH 115 + P+I +E+N+ L Sbjct: 832 ASREKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIIS 891 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL N ++ F W+ + + R + G + V+VY +AQ T Sbjct: 892 TKAGSLGINLVA-ANRVIIFDASWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGT 945 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ + R TK ++ +++ Sbjct: 946 MEDKIYDRQVTKQSLSFRVVD 966 >gi|284991028|ref|YP_003409582.1| helicase domain-containing protein [Geodermatophilus obscurus DSM 43160] gi|284064273|gb|ADB75211.1| helicase domain protein [Geodermatophilus obscurus DSM 43160] Length = 714 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 6/126 (4%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 F R + N+ + + + G GLNLQ NI++ Sbjct: 567 FARQGVRFSSIRGNQSPASRQRNIDAFVNDPDVAVAVCSLTAAGVGLNLQVASNIVLAEL 626 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W D E+ + R + G V + +IA TID + + + +K+ + L+ Sbjct: 627 SWTDAEQT------QAIDRSHRIGQTEPVTAWRIIAAQTIDARIAELIDSKAGLAARALD 680 Query: 197 ALKKET 202 +E Sbjct: 681 GSDEEV 686 >gi|299751065|ref|XP_001830032.2| helicase SWR1 [Coprinopsis cinerea okayama7#130] gi|298409203|gb|EAU91697.2| helicase SWR1 [Coprinopsis cinerea okayama7#130] Length = 1624 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 70/185 (37%), Gaps = 35/185 (18%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ 90 LQ+A E + K++ L ++++ +++ L L+ Sbjct: 1332 LQIA------FPEPSLLQYDCGKLQRLAELLQEKKAGGHRVLIFTQMTRVLDILEVFLNH 1385 Query: 91 G----------RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL--------QYGGNI 131 ++ + +N + +I + S G G+ G + Sbjct: 1386 HGYLYLRLDGATKIEDRQYITERFNADSRIFCFISSSRSGGIGIKTPQTDAKYSLTGADT 1445 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++F+ ++ + ++R + + G R V +Y ++Q T++E +L++ K ++ Sbjct: 1446 VIFYDSDFNPQ-----MDRQ---CEDRIGQIRDVHIYRFVSQYTVEEAMLRKANQKRSLD 1497 Query: 192 DLLLN 196 DL++ Sbjct: 1498 DLVIQ 1502 >gi|229174905|ref|ZP_04302425.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus MM3] gi|228608573|gb|EEK65875.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus MM3] Length = 560 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 67/177 (37%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ + II F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKANKALELIKEIDDKVIIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|195353657|ref|XP_002043320.1| GM26909 [Drosophila sechellia] gi|194127434|gb|EDW49477.1| GM26909 [Drosophila sechellia] Length = 264 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++F+ W+ +++ + R + G + V VY LI + TI+E +LQR R KS I Sbjct: 14 CVIFYDSDWNPT-----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEI 68 Query: 191 QDLLLNA 197 Q ++++ Sbjct: 69 QRMVISG 75 >gi|260811612|ref|XP_002600516.1| hypothetical protein BRAFLDRAFT_205490 [Branchiostoma floridae] gi|229285803|gb|EEN56528.1| hypothetical protein BRAFLDRAFT_205490 [Branchiostoma floridae] Length = 606 Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 62/181 (34%), Gaps = 23/181 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEK------ANAAPIIVAYHFNSDLARLQKAFPQG 91 V E ++ + D K ++++ ++V + L +++ Sbjct: 377 HFVKLAREAAFRTLSDPKYCGKMQVLQQLLDVFNKQRRKVLVFSFYTKLLDIIEQYLMST 436 Query: 92 ----------RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++++N I L + G GLN G ++++ F W+ Sbjct: 437 GEVYSRLDGTTRTSDRLRIVKDFNTNPNILLCLVSTTAGGLGLNFT-GASVVILFEPTWN 495 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q R + G ++ V VY L+ TI+E + R K + ++ ++ Sbjct: 496 PANDQ-----QAQDRAYRIGQRQDVRVYRLVTMGTIEENMYLRQVYKQQLSEIAVSDKTA 550 Query: 201 E 201 Sbjct: 551 R 551 >gi|86171519|ref|XP_966228.1| Smarca-related protein [Plasmodium falciparum 3D7] gi|46361194|emb|CAG25058.1| Smarca-related protein [Plasmodium falciparum 3D7] Length = 2719 Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 62/178 (34%), Gaps = 20/178 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALE--VIIEKANAAPIIVAYHFN----------SDLARLQKA 87 + DE+K + +E E + +A +++ F Sbjct: 1063 LQTDEKKVVINIKNEMNDNDENGEKLGEAKMHKVLIFTQFQLVLDELEEYCKYRCWKYMR 1122 Query: 88 FPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I+E+N + + + G G+NL N ++ + W+ Sbjct: 1123 LDGSTNKLIRELDIREFNLSDSIYFIYLISTRAGGLGINLTA-ANHVIMYDEDWNP---- 1177 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 I+ + R + G KR V V+ L+ + T++E + R K + L++ E + Sbjct: 1178 -FIDLQAIDRAHRIGQKREVNVWKLMTEWTVEERMAFRREQKLKLDKLVVQTQDDEDM 1234 >gi|82705590|ref|XP_727033.1| DNA repair protein RAD54 [Plasmodium yoelii yoelii str. 17XNL] gi|23482686|gb|EAA18598.1| DNA repair protein RAD54-like-related [Plasmodium yoelii yoelii] Length = 1163 Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 60/151 (39%), Gaps = 17/151 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW- 104 + L I++ +++ ++ L ++ + G ++ K I ++ Sbjct: 665 LHFLLKTIKQETNDKVVIVSNYTQTLDYMEILCRENYYKFVRLDGGISIKKRHKVISDFT 724 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N I + S G G+NL N L+ W+ ++ + R + G K+ Sbjct: 725 NTDDIFIFLLSSKSGGCGINL-ISSNRLILLDPDWNPAN-----DKQALARVWREGQKKI 778 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++Y L TIDE V QR +K + +++ Sbjct: 779 CYIYRLFCTGTIDEKVYQRQISKDGLSSMIV 809 >gi|323309655|gb|EGA62863.1| Swr1p [Saccharomyces cerevisiae FostersO] Length = 1390 Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 69/181 (38%), Gaps = 19/181 (10%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 N + QL +K + K++ L +++++ N ++ Sbjct: 1215 QNCFEVSNPLHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKV 1274 Query: 81 LA-RLQKAFPQGRTLDK---------DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG 129 L Q G + + +N + +I + S G G+NL G Sbjct: 1275 LDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLT-GA 1333 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++F+ W+ +++ R + G R V +Y ++++TI+ +L++ + K T Sbjct: 1334 DTVIFYDSDWNPA-----MDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKSQPKKT 1388 Query: 190 I 190 I Sbjct: 1389 I 1389 >gi|68073367|ref|XP_678598.1| DNA repair protein rhp16 [Plasmodium berghei strain ANKA] gi|56499117|emb|CAH97553.1| DNA repair protein rhp16, putative [Plasmodium berghei] Length = 1545 Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 17/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHP 116 ++ + S L ++ + ++ N+ ++ +L Sbjct: 1392 DDKCLIFSQYCSMLDLIEYHLKKNNIICSKLLGYMSMVSRNNILYNFNNDNQLRVLLISL 1451 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNLQ N + WW+ + R + G + V+ I +NT+ Sbjct: 1452 KAGGEGLNLQ-VANRIFIVDPWWNPAAEL-----QAIQRAHRIGQTKTVYAIRFIIENTV 1505 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E ++Q K + D + Sbjct: 1506 EEKIIQLQNKKQLVFDCTIG 1525 >gi|313228772|emb|CBY17923.1| unnamed protein product [Oikopleura dioica] Length = 985 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 58/157 (36%), Gaps = 19/157 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDP 98 ++ K K L+ ++ K +++ F + +++ ++ Sbjct: 748 LNSGKFKVLDTLLPKLFEEGHRVLLFSQFVIMMDIMERYMTARKIKYMRLDGSTPVEDRL 807 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I +N + +I L + G G+NL + ++ + + ++ R Sbjct: 808 DMIDTFNADSEISLFMVSTRAGGLGINLTS-ADTVIIHDIDPNP-----YNDKQAEDRCH 861 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V + LI ++TI+ + + K ++ + Sbjct: 862 RVGQTKQVNIIRLIVKDTIEVRMRKLAVEKLNLESKM 898 >gi|168008489|ref|XP_001756939.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] gi|162691810|gb|EDQ78170.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] Length = 2486 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 72/225 (32%), Gaps = 59/225 (26%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 K ++ ++ N ++ + K+ L+ I+ K + +++ Sbjct: 1453 KCMELRKVCNHPYLNYPPRYHIQGDMTVRTCGKLWILDRILVKLHKTGHRVLLFSTMTRL 1512 Query: 81 LARLQKAFPQGRTLDKD----------PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYG 128 L L+ R + + I E+N + + + G GLNLQ Sbjct: 1513 LDILEDYLQWRRLIYRRIDGMTTLEARESAIVEFNRPDSDCFIFLLSIRAAGRGLNLQT- 1571 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQ------------- 173 + ++ + + + E V R + G KR V V Y+ + + Sbjct: 1572 ADTVIVYDPDPNPKN-----EEQAVARAHRIGQKREVRVIYMEAVVESTPSYEKEDELRS 1626 Query: 174 -NTIDELVLQR------------------LRTKSTIQDLLLNALK 199 ++DE + + K + D ++NA + Sbjct: 1627 GGSLDEKDDEMAGKDRYVGSVESLVRNNIQQHKIDMADEVINAGR 1671 >gi|114625715|ref|XP_528720.2| PREDICTED: RAD26L hypothetical protein [Pan troglodytes] Length = 776 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 584 KMKVLQQLLNHCRINRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 628 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N++V F W+ Sbjct: 629 LDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPAN--- 684 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 685 --DLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAK 737 >gi|196003012|ref|XP_002111373.1| hypothetical protein TRIADDRAFT_55310 [Trichoplax adhaerens] gi|190585272|gb|EDV25340.1| hypothetical protein TRIADDRAFT_55310 [Trichoplax adhaerens] Length = 849 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 48/140 (34%), Gaps = 13/140 (9%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGR----TLDKDPCTIQEWNEGK---IPLLFAHPA 117 + + I ++ F S G + I +N + L Sbjct: 661 EDEGSSIDYSWAFPSMAHYAPGVLEHGIDGSVPSHERSRLIDLFNSPDNNSVWLFLISTR 720 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G+NL N +V + W+ + R + G K+ ++Y L+ NT++ Sbjct: 721 AGNLGINLVA-ANRVVIYDSAWNP-----CYDNQAAFRIYRYGQKKPCYIYRLVGSNTME 774 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 ++ + K + +++ Sbjct: 775 HVIYKCQIRKQGLSRRIIDE 794 >gi|73990698|ref|XP_534300.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 [Canis familiaris] Length = 1106 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 933 NALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQ 992 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 993 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 1046 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ TK + K Sbjct: 1047 GQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKK 1086 Score = 38.6 bits (88), Expect = 0.47, Method: Composition-based stats. Identities = 7/76 (9%), Positives = 16/76 (21%), Gaps = 14/76 (18%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDE- 54 K Y + E + + A + ++ Q+ Sbjct: 773 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLTNAGSSSGPSGND 832 Query: 55 -------KIKALEVII 63 K+ +I Sbjct: 833 TPEELRKKLIRKMKLI 848 >gi|324522288|gb|ADY48028.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [Ascaris suum] Length = 147 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 7/126 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFF 135 + + + I +N + + + G G+NL N ++ Sbjct: 8 YLRLRGHEYCRLDGSTPVMERQERINAFNASNDLFVFLLSTKAGGMGINLTA-ANHIILH 66 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ ++ R + G K+ VFV LI+ +++E +L R K ++ + Sbjct: 67 DIDFNP-----YNDKQAEDRCHRMGQKKEVFVVRLISAGSVEEGMLSVARKKLELEKEVT 121 Query: 196 NALKKE 201 A E Sbjct: 122 GANCAE 127 >gi|325186402|emb|CCA20908.1| transcriptional regulator ATRX putative [Albugo laibachii Nc14] Length = 1323 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 16/190 (8%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI-IEKANAAP 70 + D + ++ + L+ E V + I L VI + A Sbjct: 688 FKDYEHGELDFSGKMVVLFEMLEAC------QEIGDRVIVFSQSIATLNVIEMFIAQRNN 741 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDP-CTIQEWNEG--KIPLLFAHPASCGHGLNLQY 127 + D A G T +D I+++N+ + ++F + G G+NL Sbjct: 742 RLRRSRKKHDKAPFTSLRIDGSTSQQDRFRQIEQFNDPEEDVDVIFISTKAGGEGINL-C 800 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 GGN +V F + W+ + + R + G + VFVY +A T+++ V K Sbjct: 801 GGNRIVIFDVCWNP-----CNDAQSMCRSYRFGQTKPVFVYRFVAGATMEKKVYDLQIRK 855 Query: 188 STIQDLLLNA 197 + +++ Sbjct: 856 EGVAKQIVDD 865 >gi|256086324|ref|XP_002579350.1| excision repair helicase ercc-6-related [Schistosoma mansoni] gi|238664781|emb|CAZ35589.1| excision repair helicase ercc-6-related [Schistosoma mansoni] Length = 1299 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 6/155 (3%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 + K + + L++ N H+ + L+ + D+ Sbjct: 631 PRTLIFSQSIKFLDMAEKVILDIKCPVNNHTFGDDNIHYPTQHRILRLDGRTAKVCDRLS 690 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + N+ ++ G GL + N ++ W+ ++ V R + Sbjct: 691 IINKFQNDKSYTVMLLTTQVGGVGLTITS-ANRVIILDPSWNPA-----VDSQAVDRAYR 744 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 G K V VY LI T++E + +R K ++ Sbjct: 745 IGQKLDVVVYRLITCATVEEKIYRRQIFKDSVIRQ 779 >gi|62327174|ref|YP_223931.1| helicase [Phage phiJL001] gi|50059492|gb|AAT69464.1| helicase [Phage phiJL001] Length = 513 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 75/216 (34%), Gaps = 27/216 (12%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASK----TVKCLQLANGAVYYDEE-------KHW 48 K Y + + EL + G +IE +A ++ Q+ G + + E+ + Sbjct: 303 KMYEQIREELMAMVRADGSDIETLLTAELPIVNVLRLYQITAGYLPFQEDVNGEPVERVH 362 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR-------LQKAFPQGRTLDKDPCTI 101 + +++ + + +V F D+ F + D+ Sbjct: 363 TFKENPRLETALAELRRQTD-KTVVWCRFTRDIDLLTAALGKFAVRFDGSISEDERAQNK 421 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 QEW +G L + G L +++++ L R R + Sbjct: 422 QEWLKGDAQYLVPQIQAMARGHTL-NIAPYVLYYTNDARLRLR-----RQSEDRTHRGKM 475 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +V ++A +T+DE ++ LR K + + ++ Sbjct: 476 NFSVLYGDMLASDTVDEKRVKSLRKKLAVAETIMGD 511 >gi|42783352|ref|NP_980599.1| helicase, putative [Bacillus cereus ATCC 10987] gi|206978444|ref|ZP_03239310.1| putative helicase [Bacillus cereus H3081.97] gi|222097673|ref|YP_002531730.1| helicase, putative [Bacillus cereus Q1] gi|42739280|gb|AAS43207.1| helicase, putative [Bacillus cereus ATCC 10987] gi|206743342|gb|EDZ54783.1| putative helicase [Bacillus cereus H3081.97] gi|221241731|gb|ACM14441.1| helicase, putative [Bacillus cereus Q1] Length = 560 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 17/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFP 89 + +K + + K +I++ + +I F F Sbjct: 344 HIDVLMDKINRIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFR 403 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 404 GGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIG 460 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 461 RI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|324328140|gb|ADY23400.1| helicase, putative [Bacillus thuringiensis serovar finitimus YBT-020] Length = 560 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 17/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFP 89 + +K + + K +I++ + +I F F Sbjct: 344 HIDVLMDKINRIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFR 403 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 404 GGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIG 460 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 461 RI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|298530049|ref|ZP_07017451.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509423|gb|EFI33327.1| SNF2-related protein [Desulfonatronospira thiodismutans ASO3-1] Length = 638 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 78/210 (37%), Gaps = 21/210 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQL--ANGAVYYDEEKHWKEVHDEKIKAL 59 K + +++ L L + + + LQ+ + Y + ++++ + Sbjct: 269 KMHDGYKQYLLPLLNKKFLTPMDVRRIQELLLQMRRVCDSTYLVDRNTRISPKLKELEGI 328 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEW-NEGK 108 I + +++ + + + K + + K I E+ N + Sbjct: 329 LDEIVVQSGRKMVIFSEWTTMTYLIAKQLSRMGINFVELSGKIPVHKRQALIDEFTNNPE 388 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA-VFV 167 + S G GLNLQ + ++ F L W+ Q I R+ + G + V Sbjct: 389 CKVFL-STDSGGTGLNLQA-ADCVLNFELPWNPARLNQRIGRV-----NRIGQTSTSINV 441 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+++N+I+E +L + K+ + + + Sbjct: 442 INLVSKNSIEEKILAGIHLKTELFSGVFDG 471 >gi|123455548|ref|XP_001315517.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121898196|gb|EAY03294.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1579 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 28/218 (12%), Positives = 64/218 (29%), Gaps = 36/218 (16%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------------DEKIKALEV 61 + ++ + ++ K + + + + K + Sbjct: 557 QIDESTVDTSHESASMQK---VCCHPFLIEGAEEYYTKRLNLPRIDLIRNLSTKFIWVSK 613 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEW-NEGK 108 ++E+ +++ L L++ + + I + Sbjct: 614 VLEELKRENHKVLIFSQKVQLLHILREFCMLSGYNNELLIGEMSDIEKADAIDRYSKNPD 673 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + GLNL + + F W+ + + R + G + V V Sbjct: 674 SFVFLISTRAGSEGLNLT-VADTAIIFDPDWNPQN-----DLQAQARVHRIGQTQKVDVL 727 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL--NALKKETIH 204 LI NT + + R + K + LL NA K + I Sbjct: 728 RLITYNTYEHEMFIRAQKKLGLWMDLLGENATKNDGIQ 765 >gi|300176297|emb|CBK23608.2| unnamed protein product [Blastocystis hominis] Length = 943 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 49/143 (34%), Gaps = 17/143 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + + +I+++ I H+N L + + + + +L Sbjct: 510 ARYLKMLLILDECFQRRGIRTIHYNGMLGLE-----------QRAAALAAFKQSGSGVLL 558 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+ + + +V W+ ++ + R + G + V VY + Sbjct: 559 ITVGAGGEGITVTE-ADRIVLLDPNWNPT-----VDEQAIDRAYRIGQTKNVIVYRCVTC 612 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 TI+E + R K + ++ Sbjct: 613 GTIEEKMYARQVWKQCLNKKVIE 635 >gi|119174712|ref|XP_001239697.1| hypothetical protein CIMG_09318 [Coccidioides immitis RS] Length = 1183 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 6/90 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +L + G GLNL N + WW +E + R + G + Sbjct: 1075 EQPSPNVLLISLRAGGVGLNLTA-ANHVYMMDPWWSFA-----VEAQAIDRVHRMGQLKD 1128 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V + +N+I+E +L+ K I L Sbjct: 1129 VKVTRFVVKNSIEERMLRVQERKMMIAGSL 1158 >gi|126333962|ref|XP_001368542.1| PREDICTED: similar to RAD26L hypothetical protein, [Monodelphis domestica] Length = 1569 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 70/196 (35%), Gaps = 30/196 (15%) Query: 30 VKCLQLAN-------GAVYYDEEKHWKEVHDEKIKALEVII------EKANAAPIIVAYH 76 ++ N + ++ ++ + D K ++ K N +++ Sbjct: 487 THLKRICNQVFSKFKDFMQKSKDAAFETISDPKYSGKMKVLQQLLNHCKKNRDKVLLFSF 546 Query: 77 FNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEGK-IPLLFAHPASCGHGLNL 125 L L++ + ++E+N + I + + G GLN Sbjct: 547 STKLLDVLEQYCMATGLDYRRLDGSTKSEERVKIVKEFNSTQDINICLVSTMAGGLGLNF 606 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 G N++V F W+ + + R + G R V V+ LI+ T++E++ R Sbjct: 607 -VGANVVVIFDPTWNPAN-----DLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQV 660 Query: 186 TKSTIQDLLLNALKKE 201 K + +++ + + Sbjct: 661 YKQQLHCVVVGSENAK 676 >gi|312137978|ref|YP_004005314.1| ATP-dependent DNA helicase [Rhodococcus equi 103S] gi|311887317|emb|CBH46628.1| putative ATP-dependent DNA helicase [Rhodococcus equi 103S] Length = 585 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 61/206 (29%), Gaps = 21/206 (10%) Query: 2 KQYHKFQRELYCDLQGENIEA-FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Y E D G IE + Q+ N E K+ Sbjct: 358 EIYDVLLAEAVDDGFGAGIERHGRVLAVLTALKQVCNHPGLITGEMDSLAGRSGKLDLCT 417 Query: 61 VII--EKANAAPIIVAYHFNSDLARLQKAF-----------PQGRTLDKDPCTIQEWN-E 106 I+ +P ++ + L + G + + + E Sbjct: 418 DIVATNMETGSPTLIFTQYRRTGEMLVRHLAEQFDVVAPFLHGGLGQSERAEIVSRFQSE 477 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P L + G GL L + +V F WW+ +E R + G R V Sbjct: 478 DGPPALVLSLRAAGTGLTLTRAAD-VVHFDRWWNPA-----VEAQASDRAHRIGQTRTVT 531 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQD 192 V L + T++E + K+ + D Sbjct: 532 VTTLTSTTTVEEHIAGMHGHKAALTD 557 >gi|66361648|ref|XP_627347.1| ISWI related chromatinic protein with an apicomplexan specific domain architecture composed of 3x PHD+SNF2 ATpase+2xPHD [Cryptosporidium parvum Iowa II] gi|46228727|gb|EAK89597.1| ISWI related chromatinic protein with an apicomplexan specific domain architecture composed of 3x PHD+SNF2 ATpase+2xPHD [Cryptosporidium parvum Iowa II] Length = 2140 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 55/152 (36%), Gaps = 18/152 (11%) Query: 65 KANAAPIIVAYHFNSDLA-RLQKAFPQGRTLDK---------DPCTIQEW--NEGKIPLL 112 K I++ F L +G + I+E+ + + + Sbjct: 924 KCKMHKILIFTQFQLILDELENYCLWRGWQYMRLDGSTNKLIRELDIREFGLPDNYVLVY 983 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL N +V + W+ ++ V R + G R V ++ L+ Sbjct: 984 LICTRAGGLGINLVS-ANHVVMYDEDWNP-----FVDLQAVDRAHRIGQTRDVCIWKLVT 1037 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + +++E ++ K + +++ ++ H Sbjct: 1038 EWSVEERMVFGREQKLKLDKMIIKGSARDDNH 1069 >gi|323356072|gb|EGA87877.1| Rad16p [Saccharomyces cerevisiae VL3] Length = 593 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 17/131 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IV F S L ++ + +D N + + + Sbjct: 460 KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKA 519 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q +R+ + G R V + +++I+ Sbjct: 520 GGVALNL-CEASQVFILDPWWNPSVEWQSGDRV-----HRIGQYRPVKITRFCIEDSIEA 573 Query: 179 LVLQRLRTKST 189 +++ K Sbjct: 574 RIIELQEKKXK 584 >gi|229198355|ref|ZP_04325061.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus m1293] gi|228585055|gb|EEK43167.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus m1293] Length = 560 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 17/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFP 89 + +K + + K +I++ + +I F F Sbjct: 344 HIDVLMDKINRIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFR 403 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 404 GGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIG 460 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 461 RI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|109504572|ref|XP_341481.3| PREDICTED: RAD26L hypothetical protein isoform 2 [Rattus norvegicus] gi|109505337|ref|XP_001058999.1| PREDICTED: similar to putative repair and recombination helicase RAD26L isoform 1 [Rattus norvegicus] Length = 1533 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 62/175 (35%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + + K K+ + A+ + Sbjct: 507 KMKVLDQLLNHFRKHRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 551 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N+++ F W+ Sbjct: 552 LDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNF-IGANVVILFDPTWNPAN--- 607 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + R + G R V V+ LI+ T++E++ R K + +++ + + Sbjct: 608 --DLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 660 >gi|326476932|gb|EGE00942.1| chromodomain helicase DNA binding protein [Trichophyton tonsurans CBS 112818] Length = 423 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 8/124 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVF 134 F L T K I +N + G G+NL + ++ Sbjct: 11 FLDGLGLAHLRLDGSMTSLKKQKNIDAYNAPGSEYFAFLLSTRAGGVGINL-ATADTVII 69 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ + + ++R + G K+ V V+ L+ + + +E ++Q + K + +L Sbjct: 70 LDPDFNPHQ-----DIQALSRAHRIGQKKKVMVFQLMTRGSAEEKIMQIGKKKMALDHVL 124 Query: 195 LNAL 198 + + Sbjct: 125 IERM 128 >gi|313844117|ref|YP_004061780.1| hypothetical protein OlV1_147c [Ostreococcus lucimarinus virus OlV1] gi|312599502|gb|ADQ91524.1| hypothetical protein OlV1_147c [Ostreococcus lucimarinus virus OlV1] Length = 480 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 70/228 (30%), Gaps = 34/228 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-------SASKTVKCLQLANGAVYYDE--------EK 46 + Y ++ ++ A + ++ Q+ Y E + Sbjct: 236 QLYEFVFKDAQDTIKDAFKHAISLNAKNMVILECLLRARQVMIWPAMYLEGIAKQNGTQP 295 Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG--------RTLDKDP 98 K++ L +I+ +V F ++ +Q+ ++D Sbjct: 296 EQWVGRSNKMETLFRMIKAHPDEKTLVFCQFRGEMDYIQQNMECPTFRIDGSVPKDERDN 355 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + S G GLNLQ + W+ V R + Sbjct: 356 QVIAFKKAPPGAVFIIQIKSGGQGLNLQE-ATRVYITGPSWNPATEL-----QAVGRSHR 409 Query: 159 AGFKRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDLLLNALKKE 201 G + V+V LI + T ++E ++ KS + +LN + E Sbjct: 410 TGQTKQVYVKKLIYKETDTFVSVEEEMMALQGHKSIVCSKVLNDERIE 457 >gi|298714899|emb|CBJ27655.1| similar to chromodomain helicase DNA binding protein 4 isoform 5 [Ectocarpus siliculosus] Length = 2326 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 42/99 (42%), Gaps = 6/99 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + I L F + G G+NL + ++ + W+ + + R + G V Sbjct: 1181 DKDIFLFFLSTKAGGQGINL-ATADTVIIYDSDWNP-----HNDLQALARAHRIGQANKV 1234 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +Y +++ T++E +L+ + K ++ +++ K Sbjct: 1235 MIYRFVSRATVEERILEVAKKKLLLEHVVVQDGNKSMTQ 1273 >gi|228954512|ref|ZP_04116537.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228805169|gb|EEM51763.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 560 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ + +I F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|30022310|ref|NP_833941.1| SNF2 family DNA/RNA helicase [Bacillus cereus ATCC 14579] gi|206971150|ref|ZP_03232101.1| putative helicase [Bacillus cereus AH1134] gi|218232045|ref|YP_002369033.1| putative helicase [Bacillus cereus B4264] gi|228910061|ref|ZP_04073881.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis IBL 200] gi|228922980|ref|ZP_04086273.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229071731|ref|ZP_04204946.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus F65185] gi|229081486|ref|ZP_04213985.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock4-2] gi|229129507|ref|ZP_04258478.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-Cer4] gi|229152428|ref|ZP_04280620.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus m1550] gi|229180505|ref|ZP_04307847.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus 172560W] gi|29897867|gb|AAP11142.1| Superfamily II DNA/RNA helicases, SNF2 family [Bacillus cereus ATCC 14579] gi|206733922|gb|EDZ51093.1| putative helicase [Bacillus cereus AH1134] gi|218160002|gb|ACK59994.1| putative helicase [Bacillus cereus B4264] gi|228602929|gb|EEK60408.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus 172560W] gi|228631036|gb|EEK87673.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus m1550] gi|228654112|gb|EEL09979.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-Cer4] gi|228701793|gb|EEL54280.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock4-2] gi|228711326|gb|EEL63286.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus F65185] gi|228836613|gb|EEM81961.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228849578|gb|EEM94412.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis IBL 200] Length = 560 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ + +I F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|46136625|ref|XP_390004.1| hypothetical protein FG09828.1 [Gibberella zeae PH-1] Length = 882 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 20/163 (12%) Query: 53 DEKIKALEVII---EKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPC 99 K +A+ I+ + + ++V + S L + DK Sbjct: 709 SSKTEAMMQILKATMRKEGSKVVVFSQWTSFLNIIEAQLKADGMGYTRIDGSMKADKRDK 768 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ + + + ++ A A C GLNL + ++ WW IE + R + Sbjct: 769 AIEALDSDPETRVMLASLAVCSVGLNLVA-ADTVILSDSWWAPA-----IEDQAIDRVHR 822 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G R ++ L+ + +++E VL K + Sbjct: 823 LGQTRETTIFRLVMEGSVEERVLDVQSEKRELVTKAFQEKNSR 865 Score = 40.1 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 27/103 (26%), Gaps = 12/103 (11%) Query: 2 KQYHKFQRELYCDLQ--------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD 53 ++Y E +L+ G+ N + ++ Q+ N E Sbjct: 554 RKYDALLDEARGELEQWQASSQVGQKGRFQNVLERLLRLRQICNHWSLCKERVSDIL--- 610 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 K+ ++ ++ + ++ + Sbjct: 611 -KLLDEHEVVPLNEKNRGLLQEALRLYIESQEECAICYDNPND 652 >gi|290960098|ref|YP_003491280.1| DNA-binding protein [Streptomyces scabiei 87.22] gi|260649624|emb|CBG72739.1| putative DNA-binding protein [Streptomyces scabiei 87.22] Length = 584 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 10/166 (6%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN-------SDLARLQKAFPQG 91 + ++ K V +V F L + A G Sbjct: 388 YSLMQDLPDYELSPKYKEAVAIVAKNAEQGRKTLVWTTFVRSLTTLAQMLEKFGPAVVYG 447 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T D+D + + +L ++PA+ G G++L + + V+ + Q ++RI Sbjct: 448 GTPDRDEQLRRFREDPSCMVLISNPATLGEGISLHHVCHDAVYVDRDFMAGRFLQSLDRI 507 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V + A+NTIDE+V RL K +L+ Sbjct: 508 HRLG---LAPGTDTHVTVIAARNTIDEVVEIRLDQKLEFMGKILDD 550 >gi|62087684|dbj|BAD92289.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 variant [Homo sapiens] Length = 992 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 56/162 (34%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 836 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQ 895 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 896 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 949 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V + I +++++E +L+ K + K + Sbjct: 950 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKKTK 991 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 12/43 (27%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANG 38 K Y + E + + A + ++ Q+ Sbjct: 676 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 718 >gi|124807036|ref|XP_001350892.1| DNA repair protein rhp16, putative [Plasmodium falciparum 3D7] gi|23497022|gb|AAN36572.1|AE014852_16 DNA repair protein rhp16, putative [Plasmodium falciparum 3D7] Length = 1647 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 17/141 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHP 116 ++ + S L ++ + ++ + ++ +L Sbjct: 1494 DDKCLIFSQYCSMLDLIEYHLKKHNIVCSKLLGYMSMISRNNILYNFNQDKQLRVLLISL 1553 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNLQ N + WW+ + R + G + V+ I +NT+ Sbjct: 1554 KAGGEGLNLQ-VANRIFIVDPWWNPAAEL-----QAIQRAHRIGQTKTVYAIRFIIENTV 1607 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 +E ++Q K + D + Sbjct: 1608 EEKIIQLQNKKQLVFDSTIGD 1628 >gi|291449046|ref|ZP_06588436.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291351993|gb|EFE78897.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 703 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 61/190 (32%), Gaps = 22/190 (11%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPI 71 + E+ EA+ A + + + + K++ L ++ + N + Sbjct: 485 EFGAEDREAYGEAVASGR-------FMRMRRAAYAVPKTSAKLERLRELVGEARDNGLKV 537 Query: 72 IVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 +V +F LA + + + ++ + G Sbjct: 538 VVFSYFREVLAAIGDALGPDVFGPLSGSVPPARRQELVDAFSSVAGHAVLLSQIQAGGTG 597 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 ++++ E V R + G R V V+ L+A +++D+ +++ Sbjct: 598 LNMQAASVVILCEPQIKPTL-----EHQAVARAHRMGQVRTVQVHRLLATDSVDQRLVEL 652 Query: 184 LRTKSTIQDL 193 L K + D Sbjct: 653 LARKDRLFDA 662 >gi|302895297|ref|XP_003046529.1| SNF2 family DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4] gi|256727456|gb|EEU40816.1| SNF2 family DNA-dependent ATPase [Nectria haematococca mpVI 77-13-4] Length = 1111 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 65/210 (30%), Gaps = 32/210 (15%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA- 66 + + L ++A + K + H + +E +++ Sbjct: 891 VKHAFVQLHRREVDAEHDGPAKTKSRN------SVKNFDKYDGPHTKTRALIEELLQHKA 944 Query: 67 --------NAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNEG 107 +V + S L ++ + + + + Sbjct: 945 ASEANPSEPPYKSVVFSGWTSHLDLIELALNAAGIKFTRLDGSMSRTLRTSAMDKFREDN 1004 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + ++ + G GLNL GN + ++ Q I+R+ + G KR V Sbjct: 1005 TVHVILVSIMAGGLGLNLTA-GNSVYVMEPQYNPAAEAQAIDRV-----HRLGQKRPVRT 1058 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I +++ +E +L+ K + L ++ Sbjct: 1059 VRYIMRDSFEEKMLELQEKKMKLASLSMDG 1088 >gi|239992059|ref|ZP_04712723.1| hypothetical protein SrosN1_32479 [Streptomyces roseosporus NRRL 11379] Length = 743 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 61/190 (32%), Gaps = 22/190 (11%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPI 71 + E+ EA+ A + + + + K++ L ++ + N + Sbjct: 525 EFGAEDREAYGEAVASGR-------FMRMRRAAYAVPKTSAKLERLRELVGEARDNGLKV 577 Query: 72 IVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 +V +F LA + + + ++ + G Sbjct: 578 VVFSYFREVLAAIGDALGPDVFGPLSGSVPPARRQELVDAFSSVAGHAVLLSQIQAGGTG 637 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 ++++ E V R + G R V V+ L+A +++D+ +++ Sbjct: 638 LNMQAASVVILCEPQIKPTL-----EHQAVARAHRMGQVRTVQVHRLLATDSVDQRLVEL 692 Query: 184 LRTKSTIQDL 193 L K + D Sbjct: 693 LARKDRLFDA 702 >gi|239945590|ref|ZP_04697527.1| hypothetical protein SrosN15_31682 [Streptomyces roseosporus NRRL 15998] Length = 720 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 61/190 (32%), Gaps = 22/190 (11%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPI 71 + E+ EA+ A + + + + K++ L ++ + N + Sbjct: 502 EFGAEDREAYGEAVASGR-------FMRMRRAAYAVPKTSAKLERLRELVGEARDNGLKV 554 Query: 72 IVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 +V +F LA + + + ++ + G Sbjct: 555 VVFSYFREVLAAIGDALGPDVFGPLSGSVPPARRQELVDAFSSVAGHAVLLSQIQAGGTG 614 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 ++++ E V R + G R V V+ L+A +++D+ +++ Sbjct: 615 LNMQAASVVILCEPQIKPTL-----EHQAVARAHRMGQVRTVQVHRLLATDSVDQRLVEL 669 Query: 184 LRTKSTIQDL 193 L K + D Sbjct: 670 LARKDRLFDA 679 >gi|229192438|ref|ZP_04319401.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus ATCC 10876] gi|228591015|gb|EEK48871.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus ATCC 10876] Length = 545 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ + +I F Sbjct: 323 HYIKDPHIDVLMDKINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGI 382 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 383 SSVPFRGGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 439 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 440 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 491 >gi|217961719|ref|YP_002340289.1| putative helicase [Bacillus cereus AH187] gi|229140962|ref|ZP_04269506.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-ST26] gi|217067475|gb|ACJ81725.1| putative helicase [Bacillus cereus AH187] gi|228642538|gb|EEK98825.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-ST26] Length = 560 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 17/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFP 89 + +K + K +I++ + +I F F Sbjct: 344 HIDVLMDKINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFR 403 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 404 GGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIG 460 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 461 RI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|110755099|ref|XP_396302.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1-like [Apis mellifera] Length = 830 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 65/164 (39%), Gaps = 19/164 (11%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K+K L+ ++ K +++ F L L++ + C I Sbjct: 628 GKLKILDELLPKLKEEGHRVLIFSQFTMILDILEEYLTIRGQTYLRLDGSTPVTDRQCLI 687 Query: 102 QEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + I + + G G+NL + ++ + ++ ++ R + G Sbjct: 688 NQYMEDENIFIFLLSTKAGGLGINLTA-ADTVIIHDIDFNP-----YNDKQAEDRCHRVG 741 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 KR+V + L++++TI+E + + + K ++ + + E+ Sbjct: 742 QKRSVSIIRLLSEDTIEEGMYEIAQDKLHLEQQITGDEENESTD 785 >gi|294948918|ref|XP_002785960.1| ISWI chromatin remodeling complex ATPase ISW2, putative [Perkinsus marinus ATCC 50983] gi|239900068|gb|EER17756.1| ISWI chromatin remodeling complex ATPase ISW2, putative [Perkinsus marinus ATCC 50983] Length = 876 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 67/187 (35%), Gaps = 24/187 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEV---HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 ++ ++A + +E + K + L+ ++ K +++ L Sbjct: 575 LMQLRKMAQHPYLFLDEYDINDDLVRVSGKFELLDRLVPKLLHFNHKVLIFSQMTCLLDI 634 Query: 84 LQKAFPQ----------GRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGN 130 L++ +L+ + +N+ + + G GLNLQ N Sbjct: 635 LEQFLENKGLQWFRLDGSTSLEDRQSAMHRFNDPLNHDTNIFLLSTRAGGLGLNLQA-AN 693 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + W+ + ++ + R + G K V V L I+ L+LQ+ TK I Sbjct: 694 TVILYDSDWNPQ-----MDLQAMDRAHRVGQKSDVIVLRLTGMCPIERLILQKATTKRNI 748 Query: 191 QDLLLNA 197 ++ Sbjct: 749 DKKVIQG 755 >gi|154412505|ref|XP_001579285.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] gi|121913490|gb|EAY18299.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] Length = 1421 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 61/211 (28%), Gaps = 36/211 (17%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------------DEKIKALE 60 + E ++ + A+ K + D + + K L+ Sbjct: 694 KVNEETVDTAHEANDMHK---ICLHPFLIDGAEEFYTQKFRNMSRLELLLSVSAKFAWLD 750 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEW--NE 106 I+ K +++ F L L++ + + + + Sbjct: 751 RILTKLKEEGHRVLIFSQFIKLLRLLKEYCTIKGYSHELLTGQMGDVEKNAAVSRFADKD 810 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + GLNL + + F W+ + + R + G + V Sbjct: 811 TSSFVFLISTRAGSEGLNLT-IADTAIIFDPDWNPQN-----DLQAQARVHRIGQTQKVD 864 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + LI T + + R + K + + +L Sbjct: 865 IIRLITYKTYEHEMFVRAQRKLELWERILEG 895 >gi|157114744|ref|XP_001652400.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti] gi|108883553|gb|EAT47778.1| transcriptional regulator ATRX (X-linked helicase II) [Aedes aegypti] Length = 1445 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 46/121 (38%), Gaps = 9/121 (7%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFS 136 L ++ + +N+ + L + G G+NL N ++ F Sbjct: 1048 TLGLDYFRLDGSTAIESRNAACKVFNDDSNHRARLFLISTRAGGLGINLVA-ANRVIIFD 1106 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + W+ + + R + G + ++Y +A T++E + +R TK I +++ Sbjct: 1107 VSWNPSH-----DIQSIFRVYRFGQIKPCYIYRFLAMGTMEEKIYERQVTKQAISKRVID 1161 Query: 197 A 197 Sbjct: 1162 E 1162 >gi|75760928|ref|ZP_00740938.1| Superfamily II DNA/RNA helicases, SNF2 family [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228902741|ref|ZP_04066888.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis IBL 4222] gi|74491598|gb|EAO54804.1| Superfamily II DNA/RNA helicases, SNF2 family [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228856928|gb|EEN01441.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis IBL 4222] Length = 560 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 67/177 (37%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ + +I F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKATKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|291407890|ref|XP_002720269.1| PREDICTED: transcriptional regulator ATRX [Oryctolagus cuniculus] Length = 2533 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2120 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2178 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2179 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2232 >gi|281347790|gb|EFB23374.1| hypothetical protein PANDA_016786 [Ailuropoda melanoleuca] Length = 1005 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 832 NALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQ 891 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 892 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 945 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ TK + K Sbjct: 946 GQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKK 985 Score = 37.8 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 11/43 (25%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYC----DLQGENIEA--FNSASKTVKCLQLANG 38 K Y + E + A + ++ Q+ Sbjct: 672 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 714 >gi|228935549|ref|ZP_04098365.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228987419|ref|ZP_04147539.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157827|ref|ZP_04285902.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus ATCC 4342] gi|228625784|gb|EEK82536.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus ATCC 4342] gi|228772391|gb|EEM20837.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228824087|gb|EEM69903.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 560 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 65/171 (38%), Gaps = 17/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFP 89 + EK + K +I++ + +I F F Sbjct: 344 HIDVLMEKINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFR 403 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 404 GGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIG 460 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 461 RI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|195569689|ref|XP_002102841.1| GD20115 [Drosophila simulans] gi|194198768|gb|EDX12344.1| GD20115 [Drosophila simulans] Length = 264 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++F+ W+ +++ + R + G + V VY LI + TI+E +LQR R KS I Sbjct: 14 CVIFYDSDWNPT-----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEI 68 Query: 191 QDLLLNA 197 Q ++++ Sbjct: 69 QRMVISG 75 >gi|71277007|gb|AAZ29723.1| ATRY [Macropus eugenii] Length = 1771 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 69/201 (34%), Gaps = 25/201 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI------ 62 ++ D + +E + L++A +E V + + +L++I Sbjct: 1302 KDFITDSDAKVLEHSGKMVLLFEILKMA------EELGDKVLVFSQSLISLDLIEDFLEL 1355 Query: 63 ----IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAH 115 I P I + +E+N+ L Sbjct: 1356 GSNEISDDKDKPRIYKGEGKWFRNIDYYRLDGSSSAQSRKKWAEEFNDETNVRGRLFLIS 1415 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL N ++ F W+ + + R + G + VFVY +AQ T Sbjct: 1416 TKAGSLGINLVA-ANRVIVFDASWNPS-----YDIQSIFRVYRFGQSKPVFVYRFLAQGT 1469 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ + +R TK ++ +++ Sbjct: 1470 MEDKIYERQVTKQSLSFRVID 1490 >gi|228916862|ref|ZP_04080425.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228842785|gb|EEM87870.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 560 Score = 74.4 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 65/171 (38%), Gaps = 17/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFP 89 + EK + K +I++ + +I F F Sbjct: 344 HIDVLMEKINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFR 403 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 404 GGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIG 460 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 461 RI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|322701736|gb|EFY93485.1| SNF2 family helicase/ATPase, putative [Metarhizium acridum CQMa 102] Length = 1158 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 6/107 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + + ++ + G GLNL GN + ++ Q I+R Sbjct: 1035 MTRTARTAAMEKFREDNTVDVILVSIMAGGLGLNLTA-GNTVYVMEPQYNPAAEAQAIDR 1093 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G KR V I ++ +E +L+ K + L ++ Sbjct: 1094 V-----HRLGQKRPVRTIRYIMHDSFEEKMLELQEKKMKLASLSMDG 1135 >gi|156096356|ref|XP_001614212.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148803086|gb|EDL44485.1| hypothetical protein, conserved [Plasmodium vivax] Length = 1529 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 25/201 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD---EKIKALEVIIEK 65 + +L + + + K QL + + + V +K ++ ++ Sbjct: 1306 KSPLDELLKKM--KKENFVYSTKLKQLFDHIQNDMQNELHIVVFSQWIGFLKIIQKLLTL 1363 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFA 114 N I + + + G T P ++ + +L Sbjct: 1364 HNIPNKIYDGSLTYEERKTTLFWFNVQRGKVYQPGIGFTTPSSPIAVENF---AGKVLLC 1420 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL + + LWW+ IE R + G + V +Y + + Sbjct: 1421 SLKAGGVGLNLT-VSSKVYLMDLWWNPA-----IEDQAFERVHRIGQLKDVSIYKFVLEK 1474 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 T++E +LQ ++K + +L Sbjct: 1475 TVEERILQIHQSKQYTANQIL 1495 >gi|16943790|emb|CAD10805.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 [Homo sapiens] Length = 1009 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 836 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQ 895 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 896 CFQNTEAGSPTIMLLSLRAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 949 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 950 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 989 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 12/43 (27%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANG 38 K Y + E + + A + ++ Q+ Sbjct: 676 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 718 >gi|229013447|ref|ZP_04170584.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus mycoides DSM 2048] gi|229061920|ref|ZP_04199248.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH603] gi|229135050|ref|ZP_04263855.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-ST196] gi|229168972|ref|ZP_04296689.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH621] gi|228614564|gb|EEK71672.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH621] gi|228648435|gb|EEL04465.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-ST196] gi|228717363|gb|EEL69033.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH603] gi|228747859|gb|EEL97725.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus mycoides DSM 2048] Length = 560 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 67/177 (37%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ + II F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKANKALELIKEVDDKVIIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|163941989|ref|YP_001646873.1| non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] gi|163864186|gb|ABY45245.1| Non-specific serine/threonine protein kinase [Bacillus weihenstephanensis KBAB4] Length = 560 Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +IE+ + II F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKANKALELIEEVDDKVIIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|325096295|gb|EGC49605.1| transcription termination factor 2 [Ajellomyces capsulatus H88] Length = 1092 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 71/216 (32%), Gaps = 26/216 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y R Y Q + + K Q Y K + + +E Sbjct: 876 YTAITRRGYEKFQESQLSRREGPKQAKKFGQ------YEGPHTKTKALISHLLDTIEESK 929 Query: 64 --EKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEW-NEGKI 109 IV + S L ++ A TL + I + + + Sbjct: 930 EAPDEAPIKSIVFSSWTSHLDLIEIAMEDNGITTFTRLDGTMTLKQRNAAIDAFREDDNV 989 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G GLNL G+ + ++ Q ++R+ + G R V Sbjct: 990 TILLATLGAGGVGLNLTA-GSRVYIMEPQYNPAAIAQAVDRV-----HRLGQTREVTTIQ 1043 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I +++I+E + + R K + D+ LN + + + Sbjct: 1044 FIMKDSIEEKIAELARKKQQMADMSLNRGRLDRREL 1079 >gi|308068514|ref|YP_003870119.1| Hypothetical helicase [Paenibacillus polymyxa E681] gi|305857793|gb|ADM69581.1| Hypothetical helicase [Paenibacillus polymyxa E681] Length = 604 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 63/156 (40%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQ 102 + K + +I + N +I+ + D + G + + Sbjct: 376 NSKAEKALELIRQMN-EKVIIFTEYRATQEYLLNYFRDRGLSAVPYRGGMNRGRKDWMMD 434 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+I ++ A + G G+NLQ+ + ++ F L W+ +Q I R+ + G Sbjct: 435 LFR-GRIQVMIAT-EAGGEGINLQF-CHHMINFDLPWNPMRVEQRIGRV-----HRLGQT 486 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V ++ L TI+E +L L K + ++++ L Sbjct: 487 HDVNIFNLSTTGTIEEHILHLLHEKINMFEMVIGGL 522 >gi|237838391|ref|XP_002368493.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] gi|211966157|gb|EEB01353.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] Length = 1345 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 68/228 (29%), Gaps = 57/228 (25%) Query: 28 KTVKCLQLANGAVYYD---------------------------EEKHWKEVHDEKIKALE 60 ++ + N + ++ KI A++ Sbjct: 411 LFMQLRKCCNHPALFHLGASCTSAVSVGTRDSEETRSDSVAEGDDAESLLRDSSKIAAVD 470 Query: 61 VII--EKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGK 108 I+ ++V + L ++ + + I ++ Sbjct: 471 AILSFYLPRQEKVVVFSFSTAMLDLVEDYLDEKGIVSARLDGRMGDGERRAAIAAFSAQP 530 Query: 109 IP---------------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + G+GL L + ++ VF + +ER + Sbjct: 531 SENARQSPQGSHEACAAVFLVSVRAGGYGLTLSHCASVCVFLEGG---GDGNPQVERQAI 587 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V V LI ++T++E++ R R K + +L+ + + Sbjct: 588 ARLYRQGQTKKVKVIRLITRSTVEEVLYWRGRQKLKLVADVLSEDEND 635 >gi|71755921|ref|XP_828875.1| DNA repair protein [Trypanosoma brucei TREU927] gi|70834261|gb|EAN79763.1| DNA repair protein, putative [Trypanosoma brucei] Length = 762 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 53 DEKIKALEV----IIEKANAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDP 98 K++ + + + +I+ HF S L +L Sbjct: 554 STKLQMILDSIQAMKKNCPDDKMIIFSHFTSFMDVISVALDNLDIAHLRLDGTMSLSSRN 613 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ + + ++ A + G GLNL N ++ WW+ IE V R Sbjct: 614 LVIRCFQSSDDVRVILASKTATGVGLNLTA-ANHVLVVDPWWNPA-----IEEQAVHRCY 667 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V V +I ++TI++ + R K D +L A Sbjct: 668 RIGQRKHVHVKRIIIEDTIEQYCYEICRRKKEFGDAILRA 707 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 13/46 (28%), Gaps = 2/46 (4%) Query: 2 KQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEE 45 K+Y+ L+ AF+ + + Q + Sbjct: 424 KRYNSILARSRSALESSERKEAAFHIFAMMTRLRQACCHPWISRDR 469 >gi|47567784|ref|ZP_00238492.1| helicase/SNF2 family domain protein [Bacillus cereus G9241] gi|47555461|gb|EAL13804.1| helicase/SNF2 family domain protein [Bacillus cereus G9241] Length = 560 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 65/171 (38%), Gaps = 17/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFP 89 + EK + K +I++ + +I F F Sbjct: 344 HIDVLMEKINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFR 403 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 404 GGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIG 460 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 461 RI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|317146955|ref|XP_001821784.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40] Length = 1117 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + I +L A + G GLNL + + ++ Q ++R+ Sbjct: 1001 RQKALQEFHDNNDITILLATIGAGGVGLNLTS-ASRVYIMEPQYNPAAVAQAVDRV---- 1055 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G R V + +++I+E + + + K + D+ +N K + V Sbjct: 1056 -HRIGQTREVTTVQFLMKDSIEEKIFELAKKKQQLADMSMNQRKLDKREV 1104 >gi|221106342|ref|XP_002157301.1| PREDICTED: similar to excision repair cross-complementing rodent repair deficiency complementation group 6, partial [Hydra magnipapillata] Length = 1132 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 51/153 (33%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWN 105 + L ++ N +I + + G + + + ++ Sbjct: 378 LVYLMDNLKAENHRTVIFSQSIKMLDIIQKVLSELGHLILRVDGRMKNPQDRENVLDKFK 437 Query: 106 EG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E + +L G+ L N LV F W+ + V R + G ++ Sbjct: 438 EDLRYNVLLMTTQIGSVGITLT-CANRLVIFDPSWNPGT-----DAQAVDRVYRIGQEKD 491 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V VY L+ +++E + ++ K+ I A Sbjct: 492 VVVYRLVTCGSVEEKIYRKQIFKNAIMKQTTGA 524 >gi|194384686|dbj|BAG59503.1| unnamed protein product [Homo sapiens] Length = 654 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 241 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 299 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 300 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 353 >gi|575251|emb|CAA86571.1| helicase-like transcription factor [Homo sapiens] Length = 1009 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 836 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQ 895 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 896 CFQNTEAGSPTIMLLSLRAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 949 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 950 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 989 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 12/43 (27%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANG 38 K Y + E + + A + ++ Q+ Sbjct: 676 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 718 >gi|238496787|ref|XP_002379629.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] gi|220694509|gb|EED50853.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] Length = 1117 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + I +L A + G GLNL + + ++ Q ++R+ Sbjct: 1001 RQKALQEFHDNNDITILLATIGAGGVGLNLTS-ASRVYIMEPQYNPAAVAQAVDRV---- 1055 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G R V + +++I+E + + + K + D+ +N K + V Sbjct: 1056 -HRIGQTREVTTVQFLMKDSIEEKIFELAKKKQQLADMSMNQRKLDKREV 1104 >gi|213402947|ref|XP_002172246.1| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces japonicus yFS275] gi|212000293|gb|EEB05953.1| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces japonicus yFS275] Length = 749 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 72/212 (33%), Gaps = 28/212 (13%) Query: 5 HKFQRELYCDLQG----ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 KF ++ + + + N + + +Q D + K + L+ Sbjct: 404 DKFWKDRTLENEKTFPLSTLTELNCLCNSTRLIQ---HQENTDLSLNDLIASSSKFEFLK 460 Query: 61 VIIEKANAA--PIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG- 107 ++ + + ++ F L + + ++N Sbjct: 461 SLLLEFKNSQLKCVIVSQFTETLNLIEILLKHLLITHCRLDGSTPTNTRQSLVDQFNCST 520 Query: 108 --KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + S G GLNL G N L+ F W+ + + R + G R+V Sbjct: 521 YEHLSVFLLSNKSGGAGLNL-VGANRLILFEPSWNPA-----YDLQALGRIYRYGQNRSV 574 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y L++ +DE + R TK+ + + +++ Sbjct: 575 LIYTLLSTGMLDEQIYIRQHTKTGLSNAFMDS 606 >gi|328855031|gb|EGG04160.1| hypothetical protein MELLADRAFT_117156 [Melampsora larici-populina 98AG31] Length = 1185 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 20/167 (11%) Query: 51 VHDEKIKALEVIIE----KANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDK 96 + K+ L ++ +A +++ + S L + Sbjct: 1004 IPSAKLVYLLEELKRLRVEAPDDRVVILSQWTSFLDIVAQYLDENDFQYARYQGSMDSKA 1063 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+ +G PL+ G GLNL GN ++ L W E R Sbjct: 1064 RTAAVHEFQKGDKPLMLMSLKCGGVGLNLTR-GNRVINLDLAWTPAS-----EAQAFDRV 1117 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V V L+ NT+++ +L+ K I D L + + Sbjct: 1118 HRLGQTKIVNVKRLMINNTVEQRMLELQLKKQMITDNALGEGSGKRL 1164 >gi|303314479|ref|XP_003067248.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240106916|gb|EER25103.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1193 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 6/90 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +L + G GLNL N + WW +E + R + G + Sbjct: 1085 EQPSPNVLLISLRAGGVGLNLTA-ANHVYMMDPWWSFA-----VEAQAIDRVHRMGQLKD 1138 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V + +N+I+E +L+ K I L Sbjct: 1139 VKVTRFVVKNSIEERMLRVQERKMMIAGSL 1168 >gi|156088833|ref|XP_001611823.1| SNF2 family N-terminal domain containing protein [Babesia bovis] gi|154799077|gb|EDO08255.1| SNF2 family N-terminal domain containing protein [Babesia bovis] Length = 1744 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 8/126 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVF 134 + + I+E+N P + G G+NL N +V Sbjct: 877 YCNARGWKYMRLDGSTNKLIRELDIREFNSPSSPYFVYLISTRAGGLGINLTA-ANHVVL 935 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ I+ + R + G KR+V ++ ++++ T++E + K + LL Sbjct: 936 FDEDWNP-----FIDLQAIDRAHRIGQKRSVHIWKVVSEWTVEERMALCREKKLHLDKLL 990 Query: 195 LNALKK 200 +N+ ++ Sbjct: 991 INSQRQ 996 >gi|195152255|ref|XP_002017052.1| GL22086 [Drosophila persimilis] gi|194112109|gb|EDW34152.1| GL22086 [Drosophila persimilis] Length = 1712 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 7/124 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + + +N + I +L G GLNL G + ++F Sbjct: 1525 RHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTLVGGLGLNLT-GADTVIFVE 1583 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ M + + R + G K+ V VY LI +N+++E ++ + K + +++ Sbjct: 1584 HDWNP-----MKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVS 1638 Query: 197 ALKK 200 A Sbjct: 1639 AENA 1642 >gi|167773597|gb|ABZ92233.1| helicase-like transcription factor [synthetic construct] Length = 1008 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 835 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQ 894 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 895 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 948 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 949 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 988 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 12/43 (27%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANG 38 K Y + E + + A + ++ Q+ Sbjct: 675 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 717 >gi|296227865|ref|XP_002759553.1| PREDICTED: helicase-like transcription factor [Callithrix jacchus] Length = 1009 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 836 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQ 895 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 896 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 949 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 950 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 989 Score = 35.9 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 12/43 (27%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANG 38 + Y + E + + A + ++ Q+ Sbjct: 676 RIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 718 >gi|21071052|ref|NP_003062.2| helicase-like transcription factor [Homo sapiens] gi|21071054|ref|NP_620636.1| helicase-like transcription factor [Homo sapiens] gi|60390864|sp|Q14527|HLTF_HUMAN RecName: Full=Helicase-like transcription factor; AltName: Full=DNA-binding protein/plasminogen activator inhibitor 1 regulator; AltName: Full=HIP116; AltName: Full=RING finger protein 80; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3; AltName: Full=Sucrose nonfermenting protein 2-like 3 gi|119599295|gb|EAW78889.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, isoform CRA_a [Homo sapiens] gi|119599298|gb|EAW78892.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, isoform CRA_a [Homo sapiens] gi|119599299|gb|EAW78893.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, isoform CRA_a [Homo sapiens] Length = 1009 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 836 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQ 895 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 896 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 949 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 950 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 989 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 12/43 (27%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANG 38 K Y + E + + A + ++ Q+ Sbjct: 676 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 718 >gi|328848776|gb|EGF97974.1| hypothetical protein MELLADRAFT_84130 [Melampsora larici-populina 98AG31] Length = 615 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 25/259 (9%), Positives = 74/259 (28%), Gaps = 63/259 (24%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------------ 50 Y F R+ + + + + + N + + + + + Sbjct: 344 LYQNFLRQFGVE-RKQKFQGGEFFKQLTNLRMTCNHPLLFRQIEQGVDAENQPINLIEQK 402 Query: 51 ---------VHDEK-----------------IKALEVIIEKANAAPIIVAYHFNSDLARL 84 +H+ K + + + ++ + S + + Sbjct: 403 LGIKLPDERIHNSKVRDAIPTDWKLSPKIAYLVHMLQKKKSHGGGKSVIYTQWKSFIDWI 462 Query: 85 QKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 AF + + + + G GLN+ + + Sbjct: 463 IMAFDNSGITYRQLHGDQSTFERTSQLNSFTKDPNVEAFVVSIEAGGVGLNMT-CADEVY 521 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 W+ + QQ ++R+ + G + V V++++ +I++ + + K+ + Sbjct: 522 LMDAHWNPQVVQQAVDRL-----HRIGQAKPVRVFHVVTGQSIEQHLYNVQKRKAALAKR 576 Query: 194 LL-------NALKKETIHV 205 ++ K E + V Sbjct: 577 VITLTVPTEELEKAEALRV 595 >gi|114589744|ref|XP_001138277.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 1 [Pan troglodytes] gi|114589746|ref|XP_001138954.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 5 [Pan troglodytes] gi|114589748|ref|XP_001138604.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 2 [Pan troglodytes] gi|114589750|ref|XP_001138690.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 3 [Pan troglodytes] gi|114589752|ref|XP_001138877.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 4 [Pan troglodytes] Length = 1009 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 836 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLVEIPLKASGFVFTRLDGSMAQKKRVESIQ 895 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 896 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 949 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 950 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 989 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 12/43 (27%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANG 38 K Y + E + + A + ++ Q+ Sbjct: 676 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 718 >gi|531196|gb|AAA67436.1| ATPase [Homo sapiens] Length = 1009 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 836 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQ 895 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 896 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 949 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 950 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 989 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 12/43 (27%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANG 38 K Y + E + + A + ++ Q+ Sbjct: 676 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 718 >gi|158255898|dbj|BAF83920.1| unnamed protein product [Homo sapiens] Length = 1009 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 836 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQ 895 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 896 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 949 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 950 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 989 Score = 35.9 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 12/43 (27%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANG 38 + Y + E + + A + ++ Q+ Sbjct: 676 RIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 718 >gi|115384256|ref|XP_001208675.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114196367|gb|EAU38067.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1181 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ + + I +L A + G GLNL + + ++ Q I+R+ Sbjct: 1065 RNKALAEFHSNDTITVLLATIGAGGVGLNLTA-ASKVYIMEPQYNPAAVAQAIDRV---- 1119 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G R V + + +I+E + + + K + DL +N K + V Sbjct: 1120 -HRIGQTREVTTVQYLMKGSIEEKIFELAKKKQQLADLSMNRGKLDKKEV 1168 >gi|27882409|gb|AAH44659.1| Helicase-like transcription factor [Homo sapiens] gi|119599297|gb|EAW78891.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, isoform CRA_c [Homo sapiens] Length = 1008 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 835 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQ 894 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 895 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 948 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 949 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 988 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 12/43 (27%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANG 38 K Y + E + + A + ++ Q+ Sbjct: 675 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 717 >gi|229047922|ref|ZP_04193498.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH676] gi|228723379|gb|EEL74748.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH676] Length = 560 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ + +I F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKATKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKELFQN-RAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|71001976|ref|XP_755669.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293] gi|66853307|gb|EAL93631.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293] gi|159129727|gb|EDP54841.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163] Length = 1200 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +L A + G GLNL + + ++ Q I+R+ Sbjct: 1084 RNKALEDFHTNDNTTILLATIGAGGVGLNLTS-ASKVYIMEPQYNPAAVAQAIDRV---- 1138 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G R V I + +I+E + + + K + D+ +N K + + Sbjct: 1139 -HRLGQTREVTTVQFIMKGSIEEKIFELAKKKQQLADMSMNRGKLDKKEI 1187 >gi|164659870|ref|XP_001731059.1| hypothetical protein MGL_2058 [Malassezia globosa CBS 7966] gi|159104957|gb|EDP43845.1| hypothetical protein MGL_2058 [Malassezia globosa CBS 7966] Length = 526 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 48/125 (38%), Gaps = 8/125 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVF 134 F D ++++N+ + + G GLNLQ + ++ Sbjct: 7 FLRFRGIKYLRLDGSTKPDDRSVLLRQFNDPNSEYDVFIRSTRAGGLGLNLQS-ADTVII 65 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W+ + + R + G K V + L+ + ++++ +L R ++K I + Sbjct: 66 YDSDWNPHQ-----DLQAQDRAHRIGQKVEVRILRLVTEKSVEKTILARAQSKLEINGKV 120 Query: 195 LNALK 199 + A K Sbjct: 121 IQAGK 125 >gi|114589754|ref|XP_516811.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a3 isoform 6 [Pan troglodytes] Length = 1008 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 835 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLVEIPLKASGFVFTRLDGSMAQKKRVESIQ 894 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 895 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 948 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 949 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 988 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 12/43 (27%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANG 38 K Y + E + + A + ++ Q+ Sbjct: 675 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 717 >gi|229086801|ref|ZP_04218964.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-44] gi|228696522|gb|EEL49344.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-44] Length = 560 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 68/172 (39%), Gaps = 19/172 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------F 88 + +K + K +I++ +++ + + LQ F Sbjct: 344 YIDVLMDKINHIPFNSKANQALELIKEI-DDKVVIFTEYRATQMYLQWFLKQHGISSVPF 402 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 403 RGGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRI 459 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 460 GRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|85105641|ref|XP_962010.1| hypothetical protein NCU05246 [Neurospora crassa OR74A] gi|28923601|gb|EAA32774.1| conserved hypothetical protein [Neurospora crassa OR74A] gi|118496048|dbj|BAF37540.1| DNA repair and recombination protein RAD5C [Neurospora crassa] Length = 1111 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 6/107 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + + ++ + G GLNL + + ++ Q ++R Sbjct: 986 MTRTARTAAMDKFREDPSVQVILVSIMAGGLGLNLTT-ASSVYVMEPQFNPAAEAQAVDR 1044 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G KR V I N+ +E +L+ K + L ++ Sbjct: 1045 V-----HRLGQKRPVRTVRYIMANSFEEKMLRLQEKKKKLASLSMDG 1086 >gi|67515525|ref|XP_657648.1| hypothetical protein AN0044.2 [Aspergillus nidulans FGSC A4] gi|74681569|sp|Q5BHD6|RAD5_EMENI RecName: Full=DNA repair protein rad5 gi|40746207|gb|EAA65363.1| hypothetical protein AN0044.2 [Aspergillus nidulans FGSC A4] gi|259489769|tpe|CBF90313.1| TPA: DNA repair protein rad5 (EC 3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BHD6] [Aspergillus nidulans FGSC A4] Length = 1202 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL + + WW IE + R + G R V V Sbjct: 1101 VLLISLKAGGVGLNLTA-ASNVFMMDPWWSFA-----IEAQAIDRVHRMGQLRDVNVVRF 1154 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 I +++I+E +L+ K I L Sbjct: 1155 IVKDSIEERMLRVQERKMGIAGSL 1178 >gi|328856775|gb|EGG05895.1| hypothetical protein MELLADRAFT_87660 [Melampsora larici-populina 98AG31] Length = 1354 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 56/177 (31%), Gaps = 22/177 (12%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP-----IIVAYHFNSDLAR------- 83 AN A + + ++ E A +V + L R Sbjct: 1133 ANPASMNYDPLNMIFDVQDRHDEEEDPEHDYKACKGSVVKSVVFSQWTKMLDRIGDALDE 1192 Query: 84 ----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + +++ + K +L + G GLNL + +W Sbjct: 1193 FNIGYGRLDGTMSRPERNKAMEDLKTDPKCEVLLVSLRAGGVGLNLT-CAQRVYLMEPFW 1251 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + +E V R + G + V + I ++++ +L+ + K+ + ++ L Sbjct: 1252 NPA-----VENQAVDRVHRLGQTKPVRMIRYIIAGSVEQNMLEIQKRKTELANMSLG 1303 >gi|224136438|ref|XP_002326860.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222835175|gb|EEE73610.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 576 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 77/201 (38%), Gaps = 21/201 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 KF + ++ EA ++ ++L + +EK+ +E Sbjct: 348 KFVDRMELEMLRSKPEAGVKTKFLMELIRLC-------------QARNEKVLVFSQYLEP 394 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGL 123 N + +F+ +D+ I+ +N +L A +C G+ Sbjct: 395 LNLVIKQLESNFSWIQGEDILYMHGKLKIDERQILIKHFNNANSNAKVLLASTRACSEGI 454 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL G + +V + W+ +ER ++R + G ++ V++Y+LI T++E Sbjct: 455 NL-VGASRVVLLDVLWNPS-----VERQAISRAYRLGQEKVVYIYHLITSGTMEEEKYFC 508 Query: 184 LRTKSTIQDLLLNALKKETIH 204 K + +L+ + + + H Sbjct: 509 QVEKERLSNLVFDCTNRSSNH 529 >gi|219113657|ref|XP_002186412.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209583262|gb|ACI65882.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 509 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 71/218 (32%), Gaps = 48/218 (22%) Query: 20 IEAFNSASKTVKC---LQLANGAVYYDEEKHW-KEVH------------DEKIKALEVII 63 IE + S+T K + N + E VH K L+ ++ Sbjct: 293 IENGRTLSQTNKLMNHRKNINHPFLFGEPIDPASGVHLGTAHPQLLVRASGKFALLDRML 352 Query: 64 EK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN------ 105 + + +++ S L +D+ + ++N Sbjct: 353 SRLYRDGHQVLIFSQMTSVLNVMEDYLLFRNWNFCRIDGSTNIDERQRQMDQFNAEKTAG 412 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + + + G G+NL + ++ F W+ + + R Sbjct: 413 ENGRRSKADDRHFVFLLSTRAGGLGINLTS-ADTVIIFDSDWNP-----HADSQAMDRAH 466 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G V VY L+ N++D ++++ +K ++ + + Sbjct: 467 RLGQDLPVAVYRLLTVNSVDIEMMEKQISKKKLERMTI 504 >gi|228960494|ref|ZP_04122144.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar pakistani str. T13001] gi|228967268|ref|ZP_04128304.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar sotto str. T04001] gi|229111701|ref|ZP_04241249.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock1-15] gi|296504708|ref|YP_003666408.1| SNF2 family DNA/RNA helicase [Bacillus thuringiensis BMB171] gi|228671695|gb|EEL26991.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock1-15] gi|228792637|gb|EEM40203.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar sotto str. T04001] gi|228799191|gb|EEM46158.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar pakistani str. T13001] gi|296325760|gb|ADH08688.1| SNF2 family DNA/RNA helicase [Bacillus thuringiensis BMB171] Length = 560 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ + +I F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKATKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKELFQN-RAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|70943600|ref|XP_741826.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56520453|emb|CAH80960.1| hypothetical protein PC000341.04.0 [Plasmodium chabaudi chabaudi] Length = 154 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 17/140 (12%) Query: 68 AAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKIPLLFAHP 116 ++ + S L ++ + ++ N+ ++ +L Sbjct: 1 DDKCLIFSQYCSMLDLIEYHLKKNNIICSKLLGYMSMVSRNNILYNFNNDKQLRVLLISL 60 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNLQ N + WW+ + R + G + V+ I +NT+ Sbjct: 61 KAGGEGLNLQ-VANRIFIVDPWWNPAAEL-----QAIQRAHRIGQTKTVYAIRFIIENTV 114 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E ++Q K + D + Sbjct: 115 EEKIIQLQNKKQLVFDCTIG 134 >gi|331251008|ref|XP_003338107.1| SNF2/helicase domain-containing protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309317097|gb|EFP93688.1| SNF2/helicase domain-containing protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 712 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 54/180 (30%), Gaps = 28/180 (15%) Query: 26 ASKTVKCLQLANGAVYYDE----EKHWKEVHDEKIKALEVIIEKANA-------APIIVA 74 + Q N ++ + +K+W+ K+ L +E+ +V Sbjct: 532 FKQLTMIRQFCNHPIFARDEIPHQKNWRWQDSAKLVHLVDNLERFLRGGRGILRPKAVVF 591 Query: 75 YHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 F + L ++ +D + + +L + G G+ Sbjct: 592 SSFVAFLEIIEKALKEKQMGCTWLIGTLGIAKRDENLARFRTDPNCNILLGSIQAAGVGI 651 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 +L + W+ +E V R + G V VY Q +++ + Q Sbjct: 652 DL-RCAQNVYMMEPNWNPA-----MENQAVDRLYRLGQTNEVHVYRYYVQGSLEMNIHQA 705 >gi|301783337|ref|XP_002927083.1| PREDICTED: helicase-like transcription factor-like [Ailuropoda melanoleuca] Length = 1007 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 834 NALMHALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQ 893 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 894 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 947 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ TK + K Sbjct: 948 GQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKK 987 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 11/43 (25%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYC----DLQGENIEA--FNSASKTVKCLQLANG 38 K Y + E + A + ++ Q+ Sbjct: 674 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 716 >gi|294463936|gb|ADE77489.1| unknown [Picea sitchensis] Length = 377 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 63/192 (32%), Gaps = 29/192 (15%) Query: 28 KTVKCLQLANGA---------VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYH 76 ++ + N Y+ K + L+ +++ A +++ Sbjct: 90 LMLQLRKNFNHPDLLQSQFEISYHYPPVEKLMEQCGKFQLLDRLLKHLRARNHKVLIFSQ 149 Query: 77 FNSDLARLQKAFPQGRTL----------DKDPCTIQEWNEGKIP--LLFAHPASCGHGLN 124 + L L + I+++N+ + + G G+N Sbjct: 150 WTRVLDLLDYCLSESGHDMCRIDGSVKLHDRQRQIKDFNDPNSNLHIFLLSTRAGGLGIN 209 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + + + W+ + ++ + R + G + V VY L ++ + +L+ Sbjct: 210 LTA-ADTCIIYDSDWNPQ-----MDLQAMDRCHRIGQTKPVHVYRLCTSHSAECRMLKVA 263 Query: 185 RTKSTIQDLLLN 196 K ++ +++ Sbjct: 264 FDKLKLERVVIE 275 >gi|73946419|ref|XP_533502.2| PREDICTED: similar to RAD26L hypothetical protein [Canis familiaris] Length = 1402 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A + Sbjct: 504 KMKVLQQLLNHCRKNKD-KILLFSFSTKLLDVLQQYCMAAGF--------------DYRR 548 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N++V F W+ Sbjct: 549 LDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGVGLNF-VGANVVVLFDPTWNPAN--- 604 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + R + G R V V+ LI+ T++E++ R K + +++ + + Sbjct: 605 --DLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 657 >gi|71651388|ref|XP_814373.1| DNA excision/repair protein SNF2 [Trypanosoma cruzi strain CL Brener] gi|70879339|gb|EAN92522.1| DNA excision/repair protein SNF2, putative [Trypanosoma cruzi] Length = 729 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 66/223 (29%), Gaps = 37/223 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------- 50 +QY F + D+ + + ++ + ++ ++E Sbjct: 347 QQYFSFLKTERVDVTLRSADTSQPLVLLTSLMRTCDHPWLSLSDEAYREAMQNPLASPEA 406 Query: 51 -------VHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFPQG---------- 91 ++ KI + ++ K +V L L A Sbjct: 407 NRSCGDALNSSKISSALALVVKCIGEQRKTLVFSRSKRLLDLLAVALRCWLIDFARLDGD 466 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ T+Q +N ++ + G GL + ++ W+ + Sbjct: 467 VPAEERLKTVQGFNQSERLLVCLLTTQVGGVGLT-VEAASAVIIMDPSWNPSS-----DA 520 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + R + G R V VY LI T++E V + K Sbjct: 521 QAIDRVHRIGQTRDVVVYRLITCGTVEEKVYRNQVFKVMAAKQ 563 >gi|67540104|ref|XP_663826.1| hypothetical protein AN6222.2 [Aspergillus nidulans FGSC A4] gi|40738446|gb|EAA57636.1| hypothetical protein AN6222.2 [Aspergillus nidulans FGSC A4] Length = 1933 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 6/112 (5%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ ++ +L A + G GLNL + + ++ Q I+R+ Sbjct: 1815 PARNKALDNFRDDNNTTILLATIGAGGVGLNLTA-ASHVYIMEPQYNPAAVAQAIDRV-- 1871 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G R V I +++I+E + + + K + D+ LN K + V Sbjct: 1872 ---HRLGQTREVTTVQFIMKDSIEEKIAELAKKKQQLADMSLNRGKLDKAEV 1920 >gi|193084005|gb|ACF09679.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote AD1000-202-A2] Length = 569 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 54/145 (37%), Gaps = 6/145 (4%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I +E + I S + G+T I + +G L+ A Sbjct: 409 IMEIEESVVVFCHHKAIHRLLHESLQEFHPSSIIGGQTDKVRQLNIDRFQDGDTKLMIAG 468 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL ++F L W I R R + G K VF YYLI T Sbjct: 469 LRAGNLGINLTR-AKYVIFGELDWSPA-----IHRQAEDRLHRIGQKNTVFAYYLIGNGT 522 Query: 176 IDELVLQRLRTKSTIQDLLLNALKK 200 +DE V L KS D +++ +++ Sbjct: 523 LDEHVANILVDKSYEIDTIMDEVRE 547 >gi|218899388|ref|YP_002447799.1| putative helicase [Bacillus cereus G9842] gi|218544732|gb|ACK97126.1| putative helicase [Bacillus cereus G9842] Length = 560 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ + +I F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKATKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKELFQN-RAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|229019449|ref|ZP_04176271.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH1273] gi|229025691|ref|ZP_04182096.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH1272] gi|228735630|gb|EEL86220.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH1272] gi|228741861|gb|EEL92039.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus AH1273] Length = 560 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 74/200 (37%), Gaps = 16/200 (8%) Query: 3 QYHKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y+ ++ E I+ + K N K K + K + Sbjct: 321 VYYSLKKHVEKRQKENEHYIKEPHIDVLMDKI----NH--IPFNSKANKALELIKEIDDK 374 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 VII A + F F G K + + + +L A + G Sbjct: 375 VIIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKDWMKELFQN-RAQVLIAT-EAGG 432 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NLQ+ + ++ + L W+ +Q I RI + G K V +Y L ++T++E + Sbjct: 433 EGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHI 486 Query: 181 LQRLRTKSTIQDLLLNALKK 200 L+ L K + + ++ L + Sbjct: 487 LKLLYEKINLFERVIGELDE 506 >gi|228941387|ref|ZP_04103939.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974320|ref|ZP_04134889.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980912|ref|ZP_04141216.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis Bt407] gi|228778848|gb|EEM27111.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis Bt407] gi|228785370|gb|EEM33380.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818313|gb|EEM64386.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942008|gb|AEA17904.1| SNF2 family DNA/RNA helicase [Bacillus thuringiensis serovar chinensis CT-43] Length = 560 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ + +I F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKATKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKELFQN-RAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|297672219|ref|XP_002814205.1| PREDICTED: helicase-like transcription factor-like [Pongo abelii] Length = 1009 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 836 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQ 895 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 896 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 949 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 950 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 989 Score = 36.3 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 11/43 (25%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYC----DLQGENIEA--FNSASKTVKCLQLANG 38 K Y + E + A + ++ Q+ Sbjct: 676 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQMCCH 718 >gi|156055468|ref|XP_001593658.1| hypothetical protein SS1G_05086 [Sclerotinia sclerotiorum 1980] gi|154702870|gb|EDO02609.1| hypothetical protein SS1G_05086 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1012 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 17/140 (12%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKIPLL 112 +++ H L LQ F + T+ ++N + + Sbjct: 608 WHEEGDKVLIFSHSVKLLRMLQHLFQSTSYNVSFLSGEMKYEDRQDTVDDFNYDPNQFIF 667 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLN+ N +V F W+ + R + G R V + L++ Sbjct: 668 LISTKAGGVGLNITS-ANKVVIFDPNWNPS-----YDLQAQDRAYRIGQLRDVDSFRLVS 721 Query: 173 QNTIDELVLQRLRTKSTIQD 192 TI+E+V R K + Sbjct: 722 AGTIEEVVYARQIYKQQQAN 741 >gi|310793157|gb|EFQ28618.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1813 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 6/114 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R + + I+++N G L A+ G GLN+ +G N +V F ++ Sbjct: 1318 RKVARLDGNTPISQRQQNIKDFNSGDTQLYIISTAAGGTGLNI-FGANRVVIFDFKYNPI 1376 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q + R + G ++ V+VY I T ++ + R K+ + +++ Sbjct: 1377 HEQ-----QAIGRAYRIGQQKPVYVYTFICGGTYEQTLHDRAIFKTHLASRVVD 1425 >gi|261334803|emb|CBH17797.1| DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 762 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 59/160 (36%), Gaps = 21/160 (13%) Query: 53 DEKIKALEV----IIEKANAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDP 98 K++ + + + +I+ HF S L +L Sbjct: 554 STKLQMILDSIQAMKKNCPDDKMIIFSHFTSFMDVISVALDNLDIAHLRLDGTMSLSSRN 613 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+ + + ++ A + G GLNL N ++ WW+ IE V R Sbjct: 614 LVIRCFQSSDDVRVILASKTATGVGLNLTA-ANHVLVVDPWWNPA-----IEEQAVHRCY 667 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V V +I ++TI++ + R K D +L A Sbjct: 668 RIGQRKHVHVKRIIIEDTIEQYCYEICRRKKEFGDAILRA 707 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 13/46 (28%), Gaps = 2/46 (4%) Query: 2 KQYHKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEE 45 K+Y+ L+ AF+ + + Q + Sbjct: 424 KRYNSILARSRSALESSERKEAAFHIFAMMTRLRQACCHPWISRDR 469 >gi|256961060|ref|ZP_05565231.1| Snf2 family helicase [Enterococcus faecalis Merz96] gi|293384550|ref|ZP_06630416.1| Snf2 family protein [Enterococcus faecalis R712] gi|293386779|ref|ZP_06631350.1| Snf2 family protein [Enterococcus faecalis S613] gi|312906376|ref|ZP_07765384.1| protein, SNF2 family [Enterococcus faecalis DAPTO 512] gi|312979465|ref|ZP_07791153.1| SNF2 family N-terminal domain protein [Enterococcus faecalis DAPTO 516] gi|256951556|gb|EEU68188.1| Snf2 family helicase [Enterococcus faecalis Merz96] gi|291078096|gb|EFE15460.1| Snf2 family protein [Enterococcus faecalis R712] gi|291083782|gb|EFE20745.1| Snf2 family protein [Enterococcus faecalis S613] gi|310627530|gb|EFQ10813.1| protein, SNF2 family [Enterococcus faecalis DAPTO 512] gi|311287836|gb|EFQ66392.1| SNF2 family N-terminal domain protein [Enterococcus faecalis DAPTO 516] Length = 1016 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 61/178 (34%), Gaps = 26/178 (14%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKK 1010 >gi|259479572|tpe|CBF69917.1| TPA: single-stranded DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1170 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 6/112 (5%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ ++ +L A + G GLNL + + ++ Q I+R+ Sbjct: 1052 PARNKALDNFRDDNNTTILLATIGAGGVGLNLTA-ASHVYIMEPQYNPAAVAQAIDRV-- 1108 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G R V I +++I+E + + + K + D+ LN K + V Sbjct: 1109 ---HRLGQTREVTTVQFIMKDSIEEKIAELAKKKQQLADMSLNRGKLDKAEV 1157 >gi|170592673|ref|XP_001901089.1| DNA excision repair protein ERCC-6 [Brugia malayi] gi|158591156|gb|EDP29769.1| DNA excision repair protein ERCC-6, putative [Brugia malayi] Length = 147 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 6/96 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 I + G G+NL N +V F W+ + R G +RA Sbjct: 9 QNNGIFIFLLTTRVSGLGINLTA-ANRVVIFDPDWNPST-----DIQARERAWPIGQERA 62 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V +Y L+ TI+E + K + + L+ ++ Sbjct: 63 VTIYRLLTGGTIEEKIYHTXIFKVFLSNRTLDDPRQ 98 >gi|66044767|ref|YP_234608.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. syringae B728a] gi|63255474|gb|AAY36570.1| SNF2-related:Helicase, C-terminal [Pseudomonas syringae pv. syringae B728a] Length = 650 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 36/208 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ L ++ + Sbjct: 457 QIERD---EYNQIMRSDQHRFARLGALRQL---------------LERVKVRILADLMAE 498 Query: 66 AN-AAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ-EWNEGKIPLLF 113 + +I+ + +A L++ + + K I + + Sbjct: 499 LDVDDKVILFCEYQESVATLREHCIKMGVGCVTLVGSDSPKKRQKAIDAFQQDPDCRVFI 558 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 559 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAE 612 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 +TID+ + Q L K + L++ +E Sbjct: 613 DTIDQQLWQMLMDKRALASDLIDPEAEE 640 >gi|328768354|gb|EGF78401.1| hypothetical protein BATDEDRAFT_90880 [Batrachochytrium dendrobatidis JAM81] Length = 1225 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ + + ++ S G GLNL + + +W+ QQ I+R+ Sbjct: 1055 RSEAMLKFKTDPSVTIMLISLRSGGVGLNLTA-ASRVYLMEPYWNPAVEQQAIDRV---- 1109 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G V I + +I+E + R K + Sbjct: 1110 -HRMGQTLPVVSIRFIVKGSIEENIQALQRKKLEMAKATF 1148 >gi|196034943|ref|ZP_03102350.1| putative helicase [Bacillus cereus W] gi|195992482|gb|EDX56443.1| putative helicase [Bacillus cereus W] Length = 560 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 17/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFP 89 + +K + K +I++ + +I F F Sbjct: 344 HIDILMDKINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFR 403 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 404 GGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIG 460 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 461 RI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|118479411|ref|YP_896562.1| SNF2 family helicase [Bacillus thuringiensis str. Al Hakam] gi|118418636|gb|ABK87055.1| helicase, SNF2 family [Bacillus thuringiensis str. Al Hakam] Length = 560 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 17/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFP 89 + +K + K +I++ + +I F F Sbjct: 344 HIDILMDKINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFR 403 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 404 GGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIG 460 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 461 RI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|224081014|ref|XP_002306264.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222855713|gb|EEE93260.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1058 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 27/243 (11%), Positives = 66/243 (27%), Gaps = 64/243 (26%) Query: 2 KQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE--------------- 45 + Y F R E+ + + ++ + + + Sbjct: 638 QLYEAFLRSEIVLSAFDG-----SPLAALTILKKICDHPLLLTKRAAEDLLEGMESMLNP 692 Query: 46 ---------------------KHWKEVH---DEKIKALEVIIEK--ANAAPIIVAYHFNS 79 ++E H KI + +++ +++ Sbjct: 693 EDAAVAEKLAMHLADVADRTDTDFQEKHDNISCKISFILSLLDNLIPEGHNVLIFSQTRK 752 Query: 80 DLARLQ----------KAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYG 128 L +Q + ++ EG P+ G GL L Sbjct: 753 MLNLIQESLVSNGYEFIRIDGTTKATDRTKIVSDFQEGNGAPIFLLTSQVGGLGLTLTK- 811 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ W+ Q ++R + G + V VY L+ +++E + ++ K Sbjct: 812 ADRVIVVDPAWNPSTDNQSVDR-----AYRIGQMKDVVVYRLMTCGSVEEKIYRKQIFKG 866 Query: 189 TIQ 191 + Sbjct: 867 GLF 869 >gi|8977885|emb|CAB95769.1| hypothetical protein [Homo sapiens] Length = 594 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 407 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 466 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 467 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 521 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 522 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 569 >gi|218905364|ref|YP_002453198.1| putative helicase [Bacillus cereus AH820] gi|229123746|ref|ZP_04252941.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus 95/8201] gi|218536349|gb|ACK88747.1| putative helicase [Bacillus cereus AH820] gi|228659881|gb|EEL15526.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus 95/8201] Length = 560 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 17/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFP 89 + +K + K +I++ + +I F F Sbjct: 344 HIDILMDKINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFR 403 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 404 GGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIG 460 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 461 RI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|30264301|ref|NP_846678.1| helicase, putative [Bacillus anthracis str. Ames] gi|47529745|ref|YP_021094.1| helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187129|ref|YP_030381.1| helicase [Bacillus anthracis str. Sterne] gi|49480946|ref|YP_038291.1| SNF2 family helicase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141268|ref|YP_085562.1| SNF2 family helicase [Bacillus cereus E33L] gi|165873273|ref|ZP_02217882.1| putative helicase [Bacillus anthracis str. A0488] gi|167634666|ref|ZP_02392986.1| putative helicase [Bacillus anthracis str. A0442] gi|167638582|ref|ZP_02396858.1| putative helicase [Bacillus anthracis str. A0193] gi|170687388|ref|ZP_02878605.1| putative helicase [Bacillus anthracis str. A0465] gi|170709332|ref|ZP_02899748.1| putative helicase [Bacillus anthracis str. A0389] gi|177655894|ref|ZP_02937086.1| putative helicase [Bacillus anthracis str. A0174] gi|190566152|ref|ZP_03019071.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|196041595|ref|ZP_03108887.1| putative helicase [Bacillus cereus NVH0597-99] gi|196046379|ref|ZP_03113605.1| putative helicase [Bacillus cereus 03BB108] gi|225866210|ref|YP_002751588.1| putative helicase [Bacillus cereus 03BB102] gi|227817002|ref|YP_002817011.1| putative helicase [Bacillus anthracis str. CDC 684] gi|228929272|ref|ZP_04092299.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228947944|ref|ZP_04110231.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229093287|ref|ZP_04224403.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-42] gi|229186470|ref|ZP_04313633.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BGSC 6E1] gi|229601677|ref|YP_002868519.1| putative helicase [Bacillus anthracis str. A0248] gi|254683989|ref|ZP_05147849.1| putative helicase [Bacillus anthracis str. CNEVA-9066] gi|254721823|ref|ZP_05183612.1| putative helicase [Bacillus anthracis str. A1055] gi|254736337|ref|ZP_05194043.1| putative helicase [Bacillus anthracis str. Western North America USA6153] gi|254741375|ref|ZP_05199062.1| putative helicase [Bacillus anthracis str. Kruger B] gi|254753990|ref|ZP_05206025.1| putative helicase [Bacillus anthracis str. Vollum] gi|254757861|ref|ZP_05209888.1| putative helicase [Bacillus anthracis str. Australia 94] gi|301055721|ref|YP_003793932.1| putative helicase [Bacillus anthracis CI] gi|30258946|gb|AAP28164.1| putative helicase [Bacillus anthracis str. Ames] gi|47504893|gb|AAT33569.1| putative helicase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181056|gb|AAT56432.1| helicase, putative [Bacillus anthracis str. Sterne] gi|49332502|gb|AAT63148.1| possible helicase, SNF2 family [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974737|gb|AAU16287.1| possible helicase, SNF2 family [Bacillus cereus E33L] gi|164710990|gb|EDR16558.1| putative helicase [Bacillus anthracis str. A0488] gi|167513430|gb|EDR88800.1| putative helicase [Bacillus anthracis str. A0193] gi|167530118|gb|EDR92853.1| putative helicase [Bacillus anthracis str. A0442] gi|170125758|gb|EDS94669.1| putative helicase [Bacillus anthracis str. A0389] gi|170668583|gb|EDT19329.1| putative helicase [Bacillus anthracis str. A0465] gi|172079927|gb|EDT65032.1| putative helicase [Bacillus anthracis str. A0174] gi|190563071|gb|EDV17037.1| putative helicase [Bacillus anthracis Tsiankovskii-I] gi|196022849|gb|EDX61530.1| putative helicase [Bacillus cereus 03BB108] gi|196027583|gb|EDX66198.1| putative helicase [Bacillus cereus NVH0597-99] gi|225789095|gb|ACO29312.1| putative helicase [Bacillus cereus 03BB102] gi|227007674|gb|ACP17417.1| putative helicase [Bacillus anthracis str. CDC 684] gi|228596984|gb|EEK54641.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BGSC 6E1] gi|228690092|gb|EEL43888.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-42] gi|228811931|gb|EEM58265.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228830562|gb|EEM76172.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229266085|gb|ACQ47722.1| putative helicase [Bacillus anthracis str. A0248] gi|300377890|gb|ADK06794.1| possible helicase, SNF2 family [Bacillus cereus biovar anthracis str. CI] Length = 560 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 17/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFP 89 + +K + K +I++ + +I F F Sbjct: 344 HIDILMDKINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFR 403 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 404 GGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIG 460 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 461 RI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|322706831|gb|EFY98411.1| SNF2 family helicase/ATPase, putative [Metarhizium anisopliae ARSEF 23] Length = 1158 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 6/107 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + + + ++ + G GLNL GN + ++ Q I+R Sbjct: 1035 MTRMARTAAMEKFREDNTVEVILVSIMAGGLGLNLTA-GNTVYVMEPQYNPAAEAQAIDR 1093 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G KR V I Q++ +E +L+ K + L ++ Sbjct: 1094 V-----HRLGQKRPVRTVRYIMQDSFEEKMLELQEKKMKLASLSMDG 1135 >gi|326775329|ref|ZP_08234594.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326655662|gb|EGE40508.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 743 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 65/190 (34%), Gaps = 22/190 (11%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPI 71 +L E+ EA+ A + + L++ + K+ L ++++ + + Sbjct: 525 ELGAEDREAYREAVASGRFLRM-------RRAAYAVPEASAKLGRLRELVDEASESGLKV 577 Query: 72 IVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 +V +F LA + + + + ++ + G Sbjct: 578 VVFSYFREVLATVGEALGPDAFGPLSGSVAPARRQELVDAFSAVDGHAVLLSQIQAGGTG 637 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 ++++ E V R + G R V V+ L+A +++D+ +++ Sbjct: 638 LNMQAASVVILCEPQIKPTL-----EHQAVARAHRMGQVRPVQVHRLLATDSVDQRLVEL 692 Query: 184 LRTKSTIQDL 193 L K + D Sbjct: 693 LARKDRLFDA 702 >gi|194228051|ref|XP_001502735.2| PREDICTED: similar to ATRX [Equus caballus] Length = 2491 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2078 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2136 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2137 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2190 >gi|119619019|gb|EAW98613.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae), isoform CRA_c [Homo sapiens] Length = 2446 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2079 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2137 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2138 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2191 >gi|74007785|ref|XP_860057.1| PREDICTED: similar to transcriptional regulator ATRX isoform 1 isoform 4 [Canis familiaris] Length = 2482 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2069 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2127 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2128 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2181 >gi|312069902|ref|XP_003137898.1| SNF2 family domain-containing protein [Loa loa] gi|307766934|gb|EFO26168.1| SNF2 family domain-containing protein [Loa loa] Length = 840 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 49/120 (40%), Gaps = 17/120 (14%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG-----------NILVFFSLWWD 140 +++ +++N + I +L L + +I++F W+ Sbjct: 612 PVNERHTVAEKFNIDPSIHVLILTTNIPECKTTLVFTAIGGEGLNLIGADIVIFLEHDWN 671 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + + + R + G + AV VY LI + +I++ +++ + K+ + L+ A + Sbjct: 672 P-----VKDLQAMDRAHRIGQRCAVNVYRLITEGSIEQKIMRLQKFKTNTANALVGADNR 726 >gi|152976625|ref|YP_001376142.1| SNF2-related protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025377|gb|ABS23147.1| SNF2-related protein [Bacillus cytotoxicus NVH 391-98] Length = 560 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 17/158 (10%) Query: 52 HDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 + K +I+K N +I F F G K + Sbjct: 357 FNSKANQTLELIKKINDKVVIFTEYRASQMYLQWFLKQHGISSVPFRGGFKRGKKDWMKE 416 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + +L A + G G+NLQ+ N ++ + L W+ +Q I RI + G K Sbjct: 417 LFQQ-HAQVLIAT-EAGGEGINLQF-CNHMINYDLPWNPMRLEQRIGRI-----HRLGQK 468 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 469 NDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|315032634|gb|EFT44566.1| protein, SNF2 family [Enterococcus faecalis TX0017] Length = 1016 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 61/178 (34%), Gaps = 26/178 (14%) Query: 3 QYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + +++ D+ + + + + Q+ + E+ K++ Sbjct: 842 VYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYT---GGSGKVE 898 Query: 58 ALEVIIE--KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ + K N +++ F S L+ L+ +N Sbjct: 899 QVKDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFN 958 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 EG+ + + G GLNL G + ++ + LWW+ +E R + G K+ Sbjct: 959 EGEKDVFLISLKAGGTGLNLT-GADTVILYDLWWNPA-----VEEQAAGRAHRMGQKK 1010 >gi|228992971|ref|ZP_04152895.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus pseudomycoides DSM 12442] gi|228999020|ref|ZP_04158602.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus mycoides Rock3-17] gi|229006568|ref|ZP_04164204.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus mycoides Rock1-4] gi|228754707|gb|EEM04116.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus mycoides Rock1-4] gi|228760637|gb|EEM09601.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus mycoides Rock3-17] gi|228766828|gb|EEM15467.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus pseudomycoides DSM 12442] Length = 560 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 68/172 (39%), Gaps = 19/172 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------F 88 + +K + K +I++ +++ + + LQ F Sbjct: 344 YIDVLMDKINHIPFNTKANQALELIKEI-DDKVVIFTEYRATQMYLQWFLKQHGISSVPF 402 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G K + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 403 RGGFKRGKKDWMKELFQN-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRI 459 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 460 GRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|221043716|dbj|BAH13535.1| unnamed protein product [Homo sapiens] Length = 596 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 409 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 468 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 469 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 523 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 524 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 571 >gi|84997071|ref|XP_953257.1| SWI/SNF-related chromatin remodelling factor (ISWI homologue) [Theileria annulata strain Ankara] gi|65304253|emb|CAI76632.1| SWI/SNF-related chromatin remodelling factor (ISWI homologue), putative [Theileria annulata] Length = 1972 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 8/146 (5%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 D K+ +V+I + + + I+E+N Sbjct: 992 DSKVYMHKVLIFTQFQLVLDELETYCINRGWKYMRLDGSTNKLIRELDIREFNSSNSNYF 1051 Query: 113 --FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G G+NL N +V + W+ I+ + R + G KR V ++ L Sbjct: 1052 VYLISTRAGGLGINLTA-ANHVVLYDEDWNP-----FIDLQAIDRAHRIGQKRNVHIWKL 1105 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 I++ T++E + K + L+L+ Sbjct: 1106 ISEWTVEERMALIREKKLQLDKLILH 1131 >gi|329935238|ref|ZP_08285204.1| bifunctional protein [Streptomyces griseoaurantiacus M045] gi|329305061|gb|EGG48920.1| bifunctional protein [Streptomyces griseoaurantiacus M045] Length = 726 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 23/159 (14%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------------AFPQGRTLD 95 K+ L I+E+ N +V +F L ++ Sbjct: 528 KSAKLGRLREIVEEAGENGQRTVVFSYFRDVLDVVRDALTARPGGGAPVFGPLTGSVPPG 587 Query: 96 KDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + ++ P +L A + G GLN+Q +++V E V Sbjct: 588 RRQRIVDDFAATPGPAVLLAQIQAAGVGLNMQA-ASVVVLCEPQIKPTL-----EHQAVA 641 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G R V V+ L+A +DE +++ L K+ + D Sbjct: 642 RAHRMGQVRPVGVHRLLATGGVDERLVRMLERKTRLFDA 680 >gi|324998247|ref|ZP_08119359.1| helicase domain-containing protein [Pseudonocardia sp. P1] Length = 688 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 6/126 (4%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F R + N+ + + + G G+NLQ +I++ Sbjct: 540 MFVRQGMRFASIRGDQTAAARQRNIDAFTNDPDVAVAVCSLTAAGVGINLQVASDIVLAE 599 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W E+ + R + G V + +IA TID + + + K+ + D L Sbjct: 600 LSWTAAEQT------QAIDRCHRIGQTAPVTAWRVIAAQTIDARIAELIDGKAGLADQAL 653 Query: 196 NALKKE 201 + ++ + Sbjct: 654 DGIEDD 659 >gi|294889866|ref|XP_002772973.1| hypothetical protein Pmar_PMAR009695 [Perkinsus marinus ATCC 50983] gi|239877632|gb|EER04789.1| hypothetical protein Pmar_PMAR009695 [Perkinsus marinus ATCC 50983] Length = 247 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + ++F+ W+ ++R + R + G R V ++ L++ +TI+E + + Sbjct: 17 SGADCVIFYDSDWNPA-----MDRQAMDRCHRIGQTRDVHIFRLLSHHTIEENIFHKQLQ 71 Query: 187 KSTIQDLLLNA 197 K + D++++ Sbjct: 72 KRMLDDVVVDE 82 >gi|148684275|gb|EDL16222.1| stretch responsive protein 278, isoform CRA_a [Mus musculus] Length = 708 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 516 KMKVLQQLLNHFRKQRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 560 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N+++ F W+ Sbjct: 561 LDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPAN--- 616 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 617 --DLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 669 >gi|314055214|ref|YP_004063552.1| SNF2/helicase domain protein [Ostreococcus tauri virus 2] gi|313575105|emb|CBI70118.1| SNF2/helicase domain protein [Ostreococcus tauri virus 2] Length = 513 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 70/228 (30%), Gaps = 34/228 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-------SASKTVKCLQLANGAVYYDE--------EK 46 + Y ++ ++ A + ++ Q+ Y E + Sbjct: 269 QLYEFVFKDAQDTIKDAFRHAVSLNSKNMVILECLLRARQVMIWPAMYLEGIAKQNGTQP 328 Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG--------RTLDKDP 98 K++ L +I+ +V F ++ +Q+ ++D Sbjct: 329 EQWIGRSNKMETLFNMIKAHPNEKTLVFCQFRGEMDYIQQNMECPTFRIDGSVPKDERDN 388 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + S G GLNLQ + W+ V R + Sbjct: 389 QVIAFKKAPPGAVFIIQIKSGGQGLNLQE-ATRVYITGPSWNPATEL-----QAVGRSHR 442 Query: 159 AGFKRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDLLLNALKKE 201 G + V+V LI + T ++E ++ KS + +LN + E Sbjct: 443 TGQTKQVYVKKLIYKETDTFVSVEEEMMALQGHKSIVCSKVLNDERIE 490 >gi|193083817|gb|ACF09499.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote SAT1000-23-F7] Length = 571 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 51/143 (35%), Gaps = 6/143 (4%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I +E + I S + G+T I + G L+ A Sbjct: 409 IMEIEESVVVFCHHKAIHRLLHESLQEFHPSSIIGGQTDKDRQANIDRFQNGDTKLMIAG 468 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL ++F L W I R R + G K VF YYLI T Sbjct: 469 LRAGNLGINLTR-AKYVIFGELDWSPA-----IHRQAEDRLHRIGQKNTVFAYYLIGNGT 522 Query: 176 IDELVLQRLRTKSTIQDLLLNAL 198 +DE V L KS D +++ + Sbjct: 523 LDEHVANILVDKSYEIDTIMDEV 545 >gi|74007779|ref|XP_538084.2| PREDICTED: similar to transcriptional regulator ATRX isoform 1 isoform 1 [Canis familiaris] Length = 2489 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2076 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2134 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2135 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2188 >gi|229146796|ref|ZP_04275161.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-ST24] gi|228636624|gb|EEK93089.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus BDRD-ST24] Length = 560 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 17/177 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLAR 83 + + + +K + K +I++ + +I F Sbjct: 338 HYIKDPHIDVLMDKINHIPFNSKATKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGI 397 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 398 SSVPFRGGFKRGKKDWMKEIFQN-RAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMR 454 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +Q I RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 455 LEQRIGRI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|169614245|ref|XP_001800539.1| hypothetical protein SNOG_10260 [Phaeosphaeria nodorum SN15] gi|160707308|gb|EAT82595.2| hypothetical protein SNOG_10260 [Phaeosphaeria nodorum SN15] Length = 1073 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 17/146 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + L+ I + A +V F S L ++ F + + E+ Sbjct: 934 LTHLKHIRKDDKTAKSVVFSQFTSFLDLIEPALARDHIPFLRFDGSLSQKARAHILTEFT 993 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P +L + G GLNL + WW +E + R + G +R Sbjct: 994 SSPKPYVLLLSLRAGGVGLNLT-CAQNVFMMDPWWSFA-----VEAQAIDRVHRMGQERD 1047 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTI 190 V V + + +I+E +L+ K + Sbjct: 1048 VRVIRFVVEGSIEEKMLRIQDRKKFM 1073 >gi|156554795|ref|XP_001606060.1| PREDICTED: similar to helicase [Nasonia vitripennis] Length = 1053 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 70/248 (28%), Gaps = 74/248 (29%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------------------------- 52 + I+ + ++ Q+ +V Sbjct: 796 DEIDNYYILVLILRLRQMCCHPSLIKSMLDNPDVDLGSTENLIENKNCREEILKELDKLT 855 Query: 53 ----------------------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLA 82 K++A+ ++ +I+ + L Sbjct: 856 SDDEDEIDEEMVRGVMSRTNRVFDKDRRSSKVRAVLDVVNSVLEKGEKVIIVSQWTKFLD 915 Query: 83 RL----------QKAFPQGRTLDKDPC-TIQEWNEGKIP--LLFAHPASCGHGLNLQYGG 129 + G+ K+ + N+ +L + G GLNL G Sbjct: 916 IIASNLCLMEGAYFEMFTGKVAVKNRQEIVDRLNDSDNKLNVLLLSLTAGGVGLNL-VGA 974 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 N L+ L W+ + E + R + G + V +Y + ++TI+E V + K Sbjct: 975 NNLLLIDLHWNPQL-----ETQAMDRLYRFGQENNVHIYKFVCRDTIEEKVKKLQDMKLA 1029 Query: 190 IQDLLLNA 197 I + +L+ Sbjct: 1030 IANNVLSG 1037 >gi|331226481|ref|XP_003325910.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309304900|gb|EFP81491.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1449 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 51/131 (38%), Gaps = 7/131 (5%) Query: 74 AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 A F+ + +K +++ + K +L + G GLNL + Sbjct: 1306 ASAFDEFNIQYKKLDGTMSRAERNRSMEALKADPKCEVLLVSLRAGGVGLNLT-CAQRVY 1364 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 +W+ +E V R + G + V + I ++++ +L+ + K+ + ++ Sbjct: 1365 LMEPFWNPA-----VENQAVDRVHRLGQTKPVRMIRYIISGSVEQNMLEIQKRKTELANM 1419 Query: 194 LL-NALKKETI 203 L L KE + Sbjct: 1420 SLGQTLSKEEL 1430 >gi|159482707|ref|XP_001699409.1| hypothetical protein CHLREDRAFT_152316 [Chlamydomonas reinhardtii] gi|158272860|gb|EDO98655.1| predicted protein [Chlamydomonas reinhardtii] Length = 1513 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 13/112 (11%), Positives = 34/112 (30%), Gaps = 6/112 (5%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + ++ + + N+ + + G+NL N Sbjct: 1349 WLRSRLQAEGFGHRTITGDMPPKRRTEAITSFQNDPNTCVFLLSVRAGAVGINLTA-ANH 1407 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + + E + R + G R V V L + +++E++++ Sbjct: 1408 VFLLEPCMNPAT-----EHQAIGRAWRMGQSRPVTVKRLFVKGSVEEVIMKV 1454 >gi|158120894|gb|ABW16947.1| helicase DNA-binding protein [Caenorhabditis remanei] Length = 167 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K+ +E ++ K + +++ L L++ + Sbjct: 14 SGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLITMSYPFERIDGNVRGDLRQAA 73 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I +++ + + G G+NL + ++ F W+ + + R + Sbjct: 74 IDRFSKENSDRFVFLLCTRAGGLGINLTA-ADTVIIFDSDWNPQN-----DLQAQARCHR 127 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G K+ V VY LI NT + + + K + +L + Sbjct: 128 IGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVLQS 166 >gi|74007783|ref|XP_860017.1| PREDICTED: similar to transcriptional regulator ATRX isoform 1 isoform 3 [Canis familiaris] Length = 2501 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2088 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2146 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2147 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2200 >gi|1658307|emb|CAA86572.1| helicase-like transcription factor [Homo sapiens] Length = 887 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 714 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQ 773 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 774 CFQNTEAGSPTIMLLSLRAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 827 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 828 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 867 Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 11/43 (25%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYC----DLQGENIEA--FNSASKTVKCLQLANG 38 K Y + E + A + ++ Q+ Sbjct: 554 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 596 >gi|182434811|ref|YP_001822530.1| hypothetical protein SGR_1018 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463327|dbj|BAG17847.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 743 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 64/190 (33%), Gaps = 22/190 (11%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPI 71 +L E+ EA+ A + + ++ + K+ L ++++ + + Sbjct: 525 ELGAEDREAYREAVASGRFQRM-------RRAAYAVPEASAKLGRLRELVDEASESGLKV 577 Query: 72 IVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 +V +F LA + + + + ++ + G Sbjct: 578 VVFSYFREVLATVGEALGPDAFGPLSGSVAPARRQELVDAFSAVDGHAVLLSQIQAGGTG 637 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 ++++ E V R + G R V V+ L+A +++D+ +++ Sbjct: 638 LNMQAASVVILCEPQIKPTL-----EHQAVARAHRMGQVRPVQVHRLLATDSVDQRLVEL 692 Query: 184 LRTKSTIQDL 193 L K + D Sbjct: 693 LARKDRLFDA 702 >gi|74007791|ref|XP_860168.1| PREDICTED: similar to transcriptional regulator ATRX isoform 1 isoform 7 [Canis familiaris] Length = 2433 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2020 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2078 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2079 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2132 >gi|319655732|ref|NP_956947.2| transcriptional regulator ATRX [Danio rerio] Length = 2013 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 6/121 (4%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F + T K + + + L + G+NL N ++ F Sbjct: 1620 WFRNIDYYRLDGSTNALTRKKWAEDFNDISNVRGRLFLISTRAGSLGINLVA-ANRVIIF 1678 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ + + R + G + V+VY +AQ T++E + R K ++ ++ Sbjct: 1679 DASWNPS-----YDIQSIFRVYRFGQVKTVYVYRFLAQGTMEEKIYDRQVAKQSLSFRVV 1733 Query: 196 N 196 + Sbjct: 1734 D 1734 >gi|221066987|ref|ZP_03543092.1| helicase domain protein [Comamonas testosteroni KF-1] gi|220712010|gb|EED67378.1| helicase domain protein [Comamonas testosteroni KF-1] Length = 503 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 71/193 (36%), Gaps = 15/193 (7%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANA 68 ++Y ++ G+ + K V+ + G V Y E D+K+ + A Sbjct: 297 DVYKEIYGDM--TLQAMPKIVRLRKCLEGLKVPYLVETVQAMGEDDKLIIFCEYMSTVEA 354 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQY 127 +A L + +L + + + + I + + G G+ L Sbjct: 355 LKQALAS-----LGVGCVSLVGSDSLKRRQAAVDAFQRDASIKVFIGTTMAAGVGITLTA 409 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 NI+ F S+ W R R + G R V V I Q TIDE VLQ+ K Sbjct: 410 -ANIVAFASMPWTPALM-----RQAEDRAYRLGQIRDVLVLVPIIQGTIDEGVLQQQENK 463 Query: 188 STIQDLLLNALKK 200 T + ++ A KK Sbjct: 464 HTTEIEVVEAAKK 476 >gi|74007787|ref|XP_860092.1| PREDICTED: similar to transcriptional regulator ATRX isoform 1 isoform 5 [Canis familiaris] Length = 2460 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2047 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2105 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2106 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2159 >gi|293331535|ref|NP_001169906.1| hypothetical protein LOC100383801 [Zea mays] gi|224032283|gb|ACN35217.1| unknown [Zea mays] Length = 466 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 17/177 (9%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-- 97 D + +WK+ K + + IV F S L+ F Q Sbjct: 288 FQVDAKNNWKDSCKVKTLVTMLESLQRKQEKSIVFSQFTSFFDLLEIRFTQKGIKFLRFD 347 Query: 98 --------PCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 ++E++E + +L + G GLNL + + WW+ +Q I Sbjct: 348 GKLSQKHKEKVLKEFSESQDKLVLMMSLKAGGVGLNLTA-ASNVFMMDPWWNPAVEEQAI 406 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RI + G KR V V I + T++E + Q K + L + + Sbjct: 407 MRI-----HRIGQKREVRVKRFIVKGTVEERMQQVQMRKQRMVSGALTDEEIRGARI 458 >gi|238062909|ref|ZP_04607618.1| conserved hypothetical protein [Micromonospora sp. ATCC 39149] gi|237884720|gb|EEP73548.1| conserved hypothetical protein [Micromonospora sp. ATCC 39149] Length = 795 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 18/152 (11%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD---------KDPCTIQ 102 K++ L II++ N ++V F L R++ + + + + Sbjct: 598 AKVERLREIIQEAADNGWKVVVFSFFLEVLERVRVSLQEDTPVFLLSGAVPVAARQQVVD 657 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +++ +L + G GLNL +I+V E + R + G Sbjct: 658 DFSGTDGHAVLVSQIGVGGVGLNLPA-ASIVVLTEPQLTPAH-----EEQAIRRCYRMGQ 711 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R V V+ L+A+NT+D+ +L+ L KS + Sbjct: 712 TRGVRVHRLLARNTVDQRLLEMLERKSALIRA 743 >gi|304407151|ref|ZP_07388805.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] gi|304344138|gb|EFM09978.1| SNF2-related protein [Paenibacillus curdlanolyticus YK9] Length = 606 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQ 102 + K + +I + +I+ + + L + + G K + Sbjct: 383 NTKAEKAMELIREI-DDKVIIFTEYRATQEYLLQYFRSHGLQAVPYRGGMNRGKKDWMMD 441 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+ +L A + G G+NLQ+ + ++ F L W+ +Q I R+ + G K Sbjct: 442 LFR-GRAQVLIAT-EAGGEGINLQF-CHHMINFDLPWNPMRVEQRIGRV-----HRLGQK 493 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V +Y L TI+E ++ L K + +L++ L Sbjct: 494 HDVRIYNLCTLGTIEEHIVNLLHEKINLFELVIGEL 529 >gi|297469909|ref|XP_002707323.1| PREDICTED: transcriptional regulator ATRX [Bos taurus] gi|297492973|ref|XP_002700028.1| PREDICTED: alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) isoform 1 [Bos taurus] gi|296470861|gb|DAA12976.1| ATP-dependent helicase ATRX isoform 1 [Bos taurus] Length = 2479 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2066 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2124 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2125 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2178 >gi|281353705|gb|EFB29289.1| hypothetical protein PANDA_018856 [Ailuropoda melanoleuca] Length = 2482 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2069 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2127 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2128 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2181 >gi|229104857|ref|ZP_04235517.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-28] gi|228678574|gb|EEL32791.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-28] Length = 560 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 17/171 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFP 89 + + + K +I++ + +I F F Sbjct: 344 HIDVLMDNINHIPFNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFR 403 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K + + + +L A + G G+NLQ+ + ++ + L W+ +Q I Sbjct: 404 GGFKRGKKDWMKELFQK-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIG 460 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI + G K V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 461 RI-----HRLGQKNDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|74007789|ref|XP_860124.1| PREDICTED: similar to transcriptional regulator ATRX isoform 2 isoform 6 [Canis familiaris] Length = 2395 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 1982 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2040 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2041 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2094 >gi|301786781|ref|XP_002928805.1| PREDICTED: transcriptional regulator ATRX-like [Ailuropoda melanoleuca] Length = 2488 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2075 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2133 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2134 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2187 >gi|149055561|gb|EDM07145.1| alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Rattus norvegicus] Length = 883 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 43/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 +E+N+ L + G+NL N ++ F Sbjct: 470 RNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 528 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 529 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 582 >gi|109131297|ref|XP_001099874.1| PREDICTED: transcriptional regulator ATRX isoform 4 [Macaca mulatta] Length = 2490 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2077 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2135 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2136 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2189 >gi|297684878|ref|XP_002820041.1| PREDICTED: hypothetical protein LOC100434553 [Pongo abelii] Length = 1549 Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 509 KMKVLQQLLNHCRKNRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 553 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N++V F W+ Sbjct: 554 LDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPAN--- 609 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 610 --DLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAK 662 >gi|328872521|gb|EGG20888.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 2077 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 59/182 (32%), Gaps = 19/182 (10%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 IE K L+ V +E + LE ++ Sbjct: 1795 KGVIEHSTKMVILFKLLEQC---VALNERVVLFTSSIATLNLLEYFLQLREGFK------ 1845 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVF 134 + I ++N+ I L + G NL GG ++ Sbjct: 1846 WRQ--GVDYFRLDGTTRPQDRQIMIHKYNDLTNSIKLFLISTKAGSLGTNLT-GGTRVIL 1902 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F L W+ + ER V R + G + V+VY +I T++E + RL +K + Sbjct: 1903 FDLMWNP-----VHERQAVFRCFRIGQTKPVYVYTIITAATLEENMYPRLISKQQLAKRT 1957 Query: 195 LN 196 ++ Sbjct: 1958 ID 1959 >gi|313238451|emb|CBY13525.1| unnamed protein product [Oikopleura dioica] Length = 590 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 58/189 (30%), Gaps = 25/189 (13%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDE------EKHWKEVHDEKIKALEVIIEKANAAPIIV 73 + + + + N + ++ + LE ++ ++ I++ Sbjct: 367 MAKSSPLVQCTLLNMICNCPRIMPNYLVGDTHNNDSDLKNFDCVPLEELLAESA--KILI 424 Query: 74 AYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPASCGHG 122 + L ++K + + I + G Sbjct: 425 FSNSKKILTIIEKLLSGKNIKYDRIDGTIQPKERNNKVHRFQTDSTIKVCLLTTGVGAVG 484 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 L L ++ F +W+ + + V R + G K AV V+ LI TI+E + Sbjct: 485 LTLTA-ATRVIVFDPYWNPSK-----DDQAVDRAYRIGQKNAVVVFRLITCETIEEKIYS 538 Query: 183 RLRTKSTIQ 191 + K +I Sbjct: 539 KQLFKKSII 547 >gi|297469911|ref|XP_592333.4| PREDICTED: transcriptional regulator ATRX isoform 2 [Bos taurus] gi|297492975|ref|XP_002700029.1| PREDICTED: alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) isoform 2 [Bos taurus] gi|296470862|gb|DAA12977.1| ATP-dependent helicase ATRX isoform 2 [Bos taurus] Length = 2441 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2028 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2086 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2087 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2140 >gi|29567040|ref|NP_818603.1| gp65 [Mycobacterium phage Barnyard] gi|29425765|gb|AAN02119.1| gp65 [Mycobacterium phage Barnyard] Length = 653 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 71/217 (32%), Gaps = 27/217 (12%) Query: 2 KQYHKFQRELYCDLQ-----GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 KQY + ++ L+ + + S ++ V+ Q+A A+ E+ KI Sbjct: 430 KQYDQILKDAVITLESLAGEKDEVVVNGSLAEMVRLKQVAGSAL---GLDVKPELPSNKI 486 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEW 104 + ++ + + +VA F L L + + + E+ Sbjct: 487 EWIKNFLSERISAGTKTVVASQFTQFLELLSRECDKAGIRHYLYTGKTVGSERARIKHEF 546 Query: 105 NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 ++ + S G L L + +V W ++ + R Sbjct: 547 QSESGEMVVLLNTKSGGLSLTL-DAADDVVVCDQTWIPDDQE-----QVENRAYGRERDH 600 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V ++ L + TIDE + + +L++ + Sbjct: 601 NVNIWNLCSLGTIDEDIAVLNLQREGDIFAVLDSARG 637 >gi|57113917|ref|NP_001009018.1| transcriptional regulator ATRX [Pan troglodytes] gi|38502929|sp|Q7YQM4|ATRX_PANTR RecName: Full=Transcriptional regulator ATRX; AltName: Full=ATP-dependent helicase ATRX; AltName: Full=X-linked helicase II; AltName: Full=X-linked nuclear protein; Short=XNP gi|33354055|dbj|BAC81111.1| ATRX [Pan troglodytes] Length = 2492 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2079 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2137 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2138 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2191 >gi|326779112|ref|ZP_08238377.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326659445|gb|EGE44291.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 611 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 68/232 (29%), Gaps = 39/232 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------- 50 + Y + + ++ L A E E Sbjct: 346 EIYDALVGRYSARAEAARDDFDALGKAMLRLLMAATSPALLAEGTSRYEPLTYQVPPLDV 405 Query: 51 VHDEKIKALEVIIEKA------------------NAAPIIVAYHFN-------SDLARLQ 85 H + + L + +V F A + Sbjct: 406 PHGDSLYTLMRDLPNYELSPKYQEALSIVAANAEQGRKTLVWTTFVRSLSTMERMFAGYE 465 Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 A G T D+ + + +L ++PA+ G G++L + + V+ + Sbjct: 466 PAVVHGGTPDRAEEIRRFREDPDCSVLLSNPATLGEGISLHHVCHDAVYVDRDFMAGRFL 525 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q ++RI G + V V L ++ T+DE+V RL K +L+ Sbjct: 526 QSLDRIHRLGLA-PGTETNVTV--LASRGTVDEVVALRLEEKLEFMGRILDD 574 >gi|2306766|gb|AAC51655.1| zinc finger helicase [Homo sapiens] Length = 2492 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2079 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2137 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2138 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2191 >gi|33354053|dbj|BAC81110.1| ATRX [Homo sapiens] gi|133923365|gb|ABO43036.1| alpha thalassemia/mental retardation syndrome X-linked [Homo sapiens] Length = 2492 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2079 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2137 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2138 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2191 >gi|157823928|ref|NP_001099948.1| helicase-like transcription factor [Rattus norvegicus] gi|149048534|gb|EDM01075.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 (predicted) [Rattus norvegicus] Length = 974 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 55/162 (33%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + K +V F + L+ ++ K +IQ Sbjct: 801 NALMNALIELRTKDPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQ 860 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 861 CFQNTDAGSPTIMLLSLKAGGVGLNLCA-ASRVFLMDPAWNPAAEDQCFDRC-----HRL 914 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V + I +++++E +L+ K + K + Sbjct: 915 GQKQEVIITKFIVKDSVEENMLKIQNMKRELAAGAFGTKKTD 956 Score = 35.9 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 20/80 (25%), Gaps = 7/80 (8%) Query: 2 KQYHKFQRELYCDLQ----GENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + E + + A + ++ Q+ V+ Sbjct: 641 KIYQSVKNEGKATIARYFTEGTVLAHYADVLGLLLRLRQICCH-VHLPTNGTSSSDPSRS 699 Query: 56 IKALEVIIEKANAAPIIVAY 75 E+ +I++ Sbjct: 700 DTPEELRKMLVTKMKLILSS 719 >gi|109131301|ref|XP_001099769.1| PREDICTED: transcriptional regulator ATRX isoform 3 [Macaca mulatta] Length = 2452 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2039 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2097 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2098 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2151 >gi|20336209|ref|NP_000480.2| transcriptional regulator ATRX isoform 1 [Homo sapiens] gi|311033500|sp|P46100|ATRX_HUMAN RecName: Full=Transcriptional regulator ATRX; AltName: Full=ATP-dependent helicase ATRX; AltName: Full=X-linked helicase II; AltName: Full=X-linked nuclear protein; Short=XNP; AltName: Full=Znf-HX gi|6960326|gb|AAB49970.2| putative DNA dependent ATPase and helicase [Homo sapiens] gi|57208647|emb|CAI40710.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [Homo sapiens] gi|57210059|emb|CAI42674.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [Homo sapiens] gi|57284090|emb|CAI43115.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [Homo sapiens] gi|119619017|gb|EAW98611.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae), isoform CRA_a [Homo sapiens] gi|119619021|gb|EAW98615.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 2492 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2079 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2137 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2138 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2191 >gi|332025027|gb|EGI65214.1| Transcription termination factor 2 [Acromyrmex echinatior] Length = 916 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 8/152 (5%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPL 111 +K +I+ + + ++A H S F + ++ +N + Sbjct: 757 QKGNDKLIIVSQWTSLLEVIASHLPSIKGATFSKFTGNVPIKDRQGIMESFNSRNFGPRI 816 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G GLNL GGN L+ F + W+ + Q +RI + G + V+VY I Sbjct: 817 LLLSLTAGGVGLNL-IGGNHLLLFDIHWNPQLETQAQDRI-----YRFGQTKNVYVYKFI 870 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 NTI+E + K I +L+ + Sbjct: 871 CVNTIEERIKALQERKLQIAKNVLSGTTSRVV 902 Score = 35.5 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 4/46 (8%), Positives = 15/46 (32%), Gaps = 2/46 (4%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV 51 + Q++L +I+ ++ Q+ +++ Sbjct: 640 EAQKKLLA--LHADIKTHEILMLLLRLRQVCCHPALIHAMLDQEDL 683 >gi|149248584|ref|XP_001528679.1| DNA repair protein RAD5 [Lodderomyces elongisporus NRRL YB-4239] gi|146448633|gb|EDK43021.1| DNA repair protein RAD5 [Lodderomyces elongisporus NRRL YB-4239] Length = 1241 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 62/170 (36%), Gaps = 22/170 (12%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ----------- 85 N +Y + I+ L+++ E++ +IV F+S L ++ Sbjct: 1053 NFQIYLYDPNRSSSKIQALIRHLKLLQEQSPNLKVIVFSQFSSYLDIMETELKLTSDEFH 1112 Query: 86 -KAFPQGRTLDKDPCTIQEWNE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 F ++ + +N GKI +L + G GLNL + WW Sbjct: 1113 VYKFDGRLNMNDRSKLLAAFNAPVTSGKISILLLSLKAGGVGLNLTT-ASRAFMMDPWWS 1171 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+RI + G V V I +N+I+ +L+ K I Sbjct: 1172 PSIEDQAIDRI-----HRIGQNDTVKVVRFIMENSIETKMLKIQERKKQI 1216 >gi|289650008|ref|ZP_06481351.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. aesculi str. 2250] Length = 650 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 36/203 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ + ++ + Sbjct: 457 QVERD---EYNQIMRSDQHRFARLGALRQL---------------LERVKVRIVADLMAE 498 Query: 66 AN-AAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ-EWNEGKIPLLF 113 + +I+ + +A L++ + + K I + + Sbjct: 499 LDVDDKVILFCEYQESVATLREHCLKMGIGCVTLVGSDSPKKRQKAIDAFQQDPDCRVFI 558 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 559 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAE 612 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +TID+ + Q L K + L++ Sbjct: 613 DTIDQQLWQMLMDKRALASDLID 635 >gi|88855390|ref|ZP_01130054.1| ATP-dependent RNA helicase [marine actinobacterium PHSC20C1] gi|88815297|gb|EAR25155.1| ATP-dependent RNA helicase [marine actinobacterium PHSC20C1] Length = 714 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 7/108 (6%) Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I + N+ ++ ++ A + G GLNLQ N+++ W + E+ + R Sbjct: 593 RQNAIDSFANDPEVAVVVASLTAAGVGLNLQAASNVVLAELSWTNAEQT------QAIDR 646 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V + +IA +TID + + + +K+ + L+ ++ I Sbjct: 647 VHRIGQELPVTAWRIIAAHTIDARIAELIDSKAGLAARALDGSDEDVI 694 >gi|299747149|ref|XP_001841249.2| DNA repair protein rad16 [Coprinopsis cinerea okayama7#130] gi|298407389|gb|EAU80544.2| DNA repair protein rad16 [Coprinopsis cinerea okayama7#130] Length = 976 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 6/92 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N ++ + + G LNL + + WW+ Q ++RI + G +R Sbjct: 886 NNVEVTVFLVSLKAGGVALNLTE-ASRVYLMDSWWNPAVEFQAMDRI-----HRLGQRRP 939 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V L+ +++I+ ++Q KS + D L+ Sbjct: 940 VEAIKLVVEDSIESRIVQLQEKKSAMIDATLS 971 Score = 35.5 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 22/172 (12%), Positives = 45/172 (26%), Gaps = 23/172 (13%) Query: 8 QRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 +R+ L + N S + Q+A K + Sbjct: 666 KRQFATYLDQGTVLNNYSNIFSLLTRMRQMACHPDLVIRSKANASTF-----VPDE---A 717 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--PCTIQEWNEGKIPLLFAHPASCGHGL 123 + F D + + R K ++ + + L G Sbjct: 718 GEGMVCRLCNEFAEDAIQSKCHHVFDRECIKQYLEAALETQPDCPVCHLPLTIDL--EGP 775 Query: 124 NLQYGGNILV---------FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 L+ +++ W + + ++E + RQ+ A K VF Sbjct: 776 ALEVEESVVTARQGILGRLNLDKWRSSSKIEALVEELSNLRQKDATTKSIVF 827 >gi|156061829|ref|XP_001596837.1| hypothetical protein SS1G_03060 [Sclerotinia sclerotiorum 1980] gi|154700461|gb|EDO00200.1| hypothetical protein SS1G_03060 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1081 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 43/135 (31%), Gaps = 17/135 (12%) Query: 74 AYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 F + L ++ T + +I + + + + G Sbjct: 933 FSQFTTMLQLVEWRLRRAGITTVMLDGSMTPAQRQASINHFMTDVNVECFLVSLKAGGVA 992 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL N + WW+ Q +R + G R + L +++++ ++ Sbjct: 993 LNLTE-ANKVFIVDPWWNPAAEWQSADRC-----HRIGQARPCSITRLCIEDSVESRMVL 1046 Query: 183 RLRTKSTIQDLLLNA 197 K+ + +NA Sbjct: 1047 LQEKKANMIHSTINA 1061 >gi|322823065|gb|EFZ28912.1| DNA excision/repair protein SNF2, putative [Trypanosoma cruzi] Length = 737 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 65/223 (29%), Gaps = 37/223 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------- 50 ++Y + D+ + + ++ + ++ ++E Sbjct: 355 QRYFSLLKTERVDVTLRSADTSQPLVLLTSLMRTCDHPWLSLSDEAYREAMQNPLAGPEA 414 Query: 51 -------VHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFPQG---------- 91 ++ KI + ++ K +V L L A Sbjct: 415 NRNCGDALNSSKISSALALVVKCIGEQRKTLVFSRSKRLLDLLAVALRCWLIDFARLDGD 474 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ T+Q +N ++ + G GL + ++ W+ + Sbjct: 475 VPAEERLKTVQGFNQSERLLVCLLTTQVGGVGLT-VEAASAVIIMDPSWNPSS-----DA 528 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + R + G R V VY LI T++E V + K Sbjct: 529 QAIDRVHRIGQTRDVVVYRLITCGTVEEKVYRNQVFKVMAAKQ 571 >gi|289647486|ref|ZP_06478829.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. aesculi str. 2250] Length = 564 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 64/200 (32%), Gaps = 33/200 (16%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPII 72 + + ++ QL + K++ L ++ + + +I Sbjct: 376 EYNQIMRSDQHRFARLGALRQL---------------LERVKVRILADLMAELDVDDKVI 420 Query: 73 VAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGH 121 + + +A L++ + K I + + ++ G Sbjct: 421 LFCEYQESVATLREHCLKMGVGCVTLIGSDSPKKRQKAIDAFQQDPDCRVFIGTRSAAGT 480 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G NL N + F L W R + G R V V +A++TID+ + Sbjct: 481 GYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRVVVVKIPLAEDTIDQQLW 534 Query: 182 QRLRTKSTIQDLLLNALKKE 201 Q L K + L++ +E Sbjct: 535 QMLMDKRALASDLIDPDAEE 554 >gi|320037542|gb|EFW19479.1| DNA repair protein RAD5 [Coccidioides posadasii str. Silveira] Length = 1091 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 6/90 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +L + G GLNL N + WW +E + R + G + Sbjct: 983 EQPSPNVLLISLRAGGVGLNLTA-ANHVYMMDPWWSFA-----VEAQAIDRVHRMGQLKD 1036 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V + +N+I+E +L+ K I L Sbjct: 1037 VKVTRFVVKNSIEERMLRVQERKMMIAGSL 1066 >gi|294501229|ref|YP_003564929.1| ATP-dependent RNA helicase [Bacillus megaterium QM B1551] gi|294351166|gb|ADE71495.1| ATP-dependent RNA helicase [Bacillus megaterium QM B1551] Length = 557 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 73/196 (37%), Gaps = 13/196 (6%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + L ++ + + ++ LQ ++ + D+K+ I Sbjct: 322 VYMTLKNMLERQEDQKSALTEHMITPLMELLQQVPQNAKAEKVLELVQKIDDKV-----I 376 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I A + + F G K Q + + A + G G Sbjct: 377 IFTEYRATQLYLQWYLKQHGITSVPFRGGFKRGKKDWMKQLFES-HAQVFIAT-EAGGEG 434 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NLQ+ + ++ + L W+ +Q I R+ + G K V +Y L Q+T++E +L+ Sbjct: 435 INLQF-CHHIINYDLPWNPMRLEQRIGRV-----HRLGQKHDVHIYNLAIQHTVEEHILK 488 Query: 183 RLRTKSTIQDLLLNAL 198 L K + + ++ L Sbjct: 489 LLYEKINLFERVVGEL 504 >gi|189239270|ref|XP_001810058.1| PREDICTED: similar to transcriptional regulator ATRX (X-linked helicase II) [Tribolium castaneum] Length = 1848 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 42/118 (35%), Gaps = 9/118 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + D + +N + L + G G+NL N ++ F + W Sbjct: 1516 LDYFRLDGSSSCDSRSMWCRTFNNPTNTRARLFLISTKAGGLGINLVA-ANRVIIFDVSW 1574 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G + ++Y + T++ + +R TK I +++ Sbjct: 1575 NPSH-----DIQSIYRVYRFGQTKPCYIYRFVTLGTMEMKIYERQVTKQAISKRVIDE 1627 >gi|164426466|ref|XP_960853.2| hypothetical protein NCU04229 [Neurospora crassa OR74A] gi|157071347|gb|EAA31617.2| hypothetical protein NCU04229 [Neurospora crassa OR74A] Length = 1135 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 18/169 (10%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG 91 ++AN EK ++ +++ Y+ + L G Sbjct: 525 LQKIANHLTLLIPSSSD---PKEKQRSELNVLQTCAPDTWKELYNNRESMLSLANPEFCG 581 Query: 92 RTLDKDPCTIQEWNEG--------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + ++ W+E + + G GLN+ N +V F W+ Sbjct: 582 KWKILR-KLLRFWHESGDKVLVFSHSFVFLISTKAGGVGLNITS-ANKVVIFDPHWNPS- 638 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G R V V+ L++ TI+E+V R K + Sbjct: 639 ----YDLQAQDRAYRIGQIRDVDVFRLVSAGTIEEIVYARQIYKQQQAN 683 >gi|20336205|ref|NP_612114.1| transcriptional regulator ATRX isoform 2 [Homo sapiens] gi|6960328|gb|AAB49971.2| putative DNA dependent ATPase and helicase [Homo sapiens] gi|57208648|emb|CAB90351.2| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [Homo sapiens] gi|57210060|emb|CAI42675.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [Homo sapiens] gi|57284091|emb|CAI43116.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [Homo sapiens] gi|119619020|gb|EAW98614.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae), isoform CRA_d [Homo sapiens] Length = 2454 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2041 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2099 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2100 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2153 >gi|297286676|ref|XP_002803057.1| PREDICTED: helicase-like transcription factor-like [Macaca mulatta] Length = 932 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + +K +V F + L+ ++ K +IQ Sbjct: 759 NALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQ 818 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 819 CFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCFDRC-----HRL 872 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ K + K Sbjct: 873 GQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKK 912 Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 11/43 (25%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYC----DLQGENIEA--FNSASKTVKCLQLANG 38 K Y + E + A + ++ Q+ Sbjct: 599 KIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 641 >gi|237801981|ref|ZP_04590442.1| SNF2-related:helicase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024839|gb|EGI04895.1| SNF2-related:helicase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 651 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 67/203 (33%), Gaps = 36/203 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ L ++ + Sbjct: 457 QIERD---EYNQIMRSDQHRFARLGALRQL---------------LERVKVRILADLMAE 498 Query: 66 AN-AAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ-EWNEGKIPLLF 113 + +I+ + +A L++ + + K I + + Sbjct: 499 LDVDDKVILFCEYQESVATLREHCIKMGVGCVTLVGSDSPKKRQKAIDAFQQDPDCRVFI 558 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 559 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAE 612 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +TID+ + Q L K + L++ Sbjct: 613 DTIDQQLWQMLMDKRALASDLID 635 >gi|312219363|emb|CBX99307.1| similar to SNF2 family helicase/ATPase [Leptosphaeria maculans] Length = 1120 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 62/200 (31%), Gaps = 29/200 (14%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA---------API 71 E N ++ + + + + H + L + E Sbjct: 912 EYANFLAERDRIRK---DPKLSKKIGSYTGPHTKTQALLNDLKEFHEWSENNPHERPIKS 968 Query: 72 IVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLFAHPASCG 120 IV + + L ++ A +D + + + ++ + G Sbjct: 969 IVFSSWTTHLDLIEIALQAHNHTYVRLDGRMSRDARDKSMQRLREDPSVRVMLVSIGAGG 1028 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL N + ++ Q ++R+ + G R V + I + +E + Sbjct: 1029 LGLNLTT-ANKVFMMEPQFNPAAEAQAVDRV-----HRLGQDRDVTIKRFIMDKSFEEKM 1082 Query: 181 LQRLRTKSTIQDLLLNALKK 200 L + K + DL + +K Sbjct: 1083 LVMQKKKKDLADLTMARERK 1102 >gi|154270293|ref|XP_001536002.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150410016|gb|EDN05404.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 884 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 21/167 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA-----------F 88 +E E KI+AL I+ +A +V + S L ++ Sbjct: 704 NEIDIDPETTSSKIQALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLVRNGITFARID 763 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + +D N+ +L A C GLNL N ++ WW I Sbjct: 764 GKMSSAKRDAAMNALSNDSNCTVLLASLNVCSVGLNLVA-ANQVILADSWWAPA-----I 817 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLL 194 E V R + G KR ++ L+ +N+I++ VL + + K D + Sbjct: 818 EDQAVDRVYRLGQKRPTTIWRLVMENSIEDRVLDKQKEKHRKRDDRM 864 >gi|38502928|sp|Q7YQM3|ATRX_PONPY RecName: Full=Transcriptional regulator ATRX; AltName: Full=ATP-dependent helicase ATRX; AltName: Full=X-linked helicase II; AltName: Full=X-linked nuclear protein; Short=XNP gi|33354057|dbj|BAC81112.1| ATRX [Pongo pygmaeus] Length = 2492 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2079 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2137 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2138 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2191 >gi|320587549|gb|EFX00030.1| DNA excision repair protein [Grosmannia clavigera kw1407] Length = 1181 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 17/135 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN-EGKIPLLFAH 115 +V F S L+ ++ A + ++++ + +L Sbjct: 1009 PTIKSVVFSQFTSFLSLIEPALRRDNMAFLRLDGTMAQKARAAVLEDFRRSDRFTVLLIS 1068 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL + WW +E + R + G V VY IA+ + Sbjct: 1069 LRAGGVGLNLT-MAKRVFVMDPWWSFS-----VEAQAIDRVHRMGQDEEVKVYRFIAKGS 1122 Query: 176 IDELVLQRLRTKSTI 190 ++E +L+ K + Sbjct: 1123 VEEKMLKIQDRKKFM 1137 Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 4/49 (8%), Positives = 14/49 (28%), Gaps = 6/49 (12%) Query: 3 QYH----KFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEE 45 Y + +R ++ + + ++ ++ Q V Sbjct: 795 IYEHIFLRVKRSFTATVEAGTVMKSYTSIFAQVLRLRQCCCHPVLVRNM 843 >gi|2306809|gb|AAC51657.1| X-linked nuclear protein [Homo sapiens] Length = 2375 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 1962 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2020 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2021 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2074 >gi|74183379|dbj|BAE36571.1| unnamed protein product [Mus musculus] Length = 916 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 25/201 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI------ 62 ++ D E +E + L++A +E V + + +L++I Sbjct: 652 KDFVTDTDAEVLEHSGKMVLLFEILRMA------EEIGDKVLVFSQSLISLDLIEDFLEL 705 Query: 63 ----IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAH 115 + P+I +E+N+ L Sbjct: 706 ASREKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIIS 765 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL N ++ F W+ + + R + G + V+VY +AQ T Sbjct: 766 TKAGSLGINLVA-ANRVIIFDASWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGT 819 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +++ + R TK ++ +++ Sbjct: 820 MEDKIYDRQVTKQSLSFRVVD 840 >gi|1778307|gb|AAB49969.1| putative DNA dependent ATPase and helicase [Homo sapiens] gi|1778353|gb|AAB40700.1| putative DNA dependent ATPase and helicase [Homo sapiens] gi|225356534|gb|AAI56297.1| Alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) [synthetic construct] Length = 2288 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 1875 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 1933 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 1934 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 1987 >gi|71004558|ref|XP_756945.1| hypothetical protein UM00798.1 [Ustilago maydis 521] gi|74704333|sp|Q4PGG5|RAD5_USTMA RecName: Full=DNA repair protein RAD5 gi|46095546|gb|EAK80779.1| hypothetical protein UM00798.1 [Ustilago maydis 521] Length = 1387 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 54/171 (31%), Gaps = 20/171 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQ 90 +Y I L + A ++ F S L R Sbjct: 1199 IYVRNNLRTSTKLSALISHLNTLRATEAAFKGVIFSQFTSFLDLIEPVLTRYRFHFLRLD 1258 Query: 91 GRTLDK-DPCTIQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G T K + E+ + L + G GLNL N + WW+ Sbjct: 1259 GSTPQKVRDKLVLEFQSPSPTNHVVLFLISLKAGGVGLNLTA-ANKIWLLDFWWN----- 1312 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 IE + R + G V V+ I +++I++ +L + K + LN Sbjct: 1313 SSIENQAIDRIHRFGQTSPVSVFRYIIKDSIEDRILLIQKRKDMLIKHALN 1363 >gi|221485219|gb|EEE23509.1| hypothetical protein TGGT1_105260 [Toxoplasma gondii GT1] Length = 1244 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 16/146 (10%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHP 116 +IV H + L +++ DK ++E+ + Sbjct: 960 GMKVIVFAHHRAVLDYIEEFLQAEMKRTIRIDGRTPQDKREQLVKEFQTSPSCQVALLSI 1019 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 +CGHGLNL G +VF L+W + Q +R +V ++YLIA+ T+ Sbjct: 1020 TACGHGLNLTAAGT-VVFAELYWVPGQMIQAEDRSHRI----GTEFSSVQIHYLIAEGTL 1074 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 DE V + L+ K + L+ +++ Sbjct: 1075 DETVFRILQRKWRLMTSTLDGEQQQL 1100 >gi|1778351|gb|AAB40698.1| putative DNA dependent ATPase and helicase [Homo sapiens] Length = 2375 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 1962 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2020 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2021 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2074 >gi|297710407|ref|XP_002831879.1| PREDICTED: transcriptional regulator ATRX-like [Pongo abelii] Length = 2454 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 2041 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 2099 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 2100 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2153 >gi|1778352|gb|AAB40699.1| putative DNA dependent ATPase and helicase [Homo sapiens] Length = 2337 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 1924 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 1982 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 1983 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2036 >gi|330878665|gb|EGH12814.1| SNF2-related:helicase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 650 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 33/200 (16%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPII 72 + + ++ QL + K++ + ++ + + +I Sbjct: 462 EYNQIMRSDTHRFARLGALRQL---------------LERVKVRIVADLMAELDVDDKVI 506 Query: 73 VAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ-EWNEGKIPLLFAHPASCGH 121 + + +A L++ + + K I + + ++ G Sbjct: 507 LFCEYQESVATLREHCLKMGIGCVTLVGSDSPKKRQKAIDAFQQDPDCRVFIGTRSAAGT 566 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G NL N + F L W R + G R V V +A++TID+ + Sbjct: 567 GYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAEDTIDQQLW 620 Query: 182 QRLRTKSTIQDLLLNALKKE 201 Q L K + L++ +E Sbjct: 621 QMLMDKRALASDLIDPEAEE 640 >gi|290970736|ref|XP_002668235.1| predicted protein [Naegleria gruberi] gi|284081521|gb|EFC35491.1| predicted protein [Naegleria gruberi] Length = 273 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 8/113 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F D+ I + N+ I +L + G+NL G N + + W+ Sbjct: 1 MRFDGSTPFDQRQSCIDKINDNTNNITVLLISTLAGCEGINL-MGANRVALIDVNWNPSH 59 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + R+ + G + V++Y I +NT+++LVL+R K + + +++ Sbjct: 60 DSEAVCRV-----FRIGQLKPVYIYRFICENTMEDLVLKRQLQKENLSNWIVD 107 >gi|308160977|gb|EFO63440.1| Transcriptional regulator ATRX, putative [Giardia lamblia P15] Length = 1367 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 20/165 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K +I N ++ + L+ + Sbjct: 656 SSKYSLFMELITHIKNNNHRALIFCDYKLIFNILEHLLSYNDIPYLRLDGTITDVSERDK 715 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N K L GLNL G N ++ F+ W L+ IE + R + Sbjct: 716 ICKSFNANKKYTALLISIKLGSMGLNLT-GANRVILFAPAWSLQ-----IEEQAIARAYR 769 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G KR V VY L NT++E ++ R K+ I ++ L+ K ++ Sbjct: 770 MGQKRNVVVYKLACINTLEEKMVVRQLQKAGIANVTLDDEKHRSV 814 >gi|120611354|ref|YP_971032.1| helicase domain-containing protein [Acidovorax citrulli AAC00-1] gi|120589818|gb|ABM33258.1| helicase domain protein [Acidovorax citrulli AAC00-1] Length = 709 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 55/162 (33%), Gaps = 18/162 (11%) Query: 51 VHDEKIKALEVIIEKA-NAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDPC 99 + K+ L ++ + II+ + S L + + K Sbjct: 527 LESLKVPFLLDTVQSMGDDDKIIIFCEYMSTVDALKQALAGLGIGCVSLVGADSAKKRQA 586 Query: 100 TIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + + ++ G G+ L N++ F S+ W R R + Sbjct: 587 AVDAFQQVPTNKVFIGTTSAAGVGITLTA-ANLVAFASMPWTPALM-----RQAEDRAYR 640 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G R V V I TIDE VL+ K T + ++ A K Sbjct: 641 LGQLRDVLVIVPIVPGTIDEGVLKLQDAKRTTEVEVVEAAKA 682 >gi|296189487|ref|XP_002742800.1| PREDICTED: hypothetical protein LOC100415645 [Callithrix jacchus] Length = 1546 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 508 KMKVLQQLLNHCRKNRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 552 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N++V F W+ Sbjct: 553 LDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNF-IGANVVVLFDPTWNPAN--- 608 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 609 --DLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 661 >gi|308271724|emb|CBX28332.1| hypothetical protein N47_G36560 [uncultured Desulfobacterium sp.] Length = 645 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 8/124 (6%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F S F I+ + E + G G NLQ+ ++ Sbjct: 465 SEFLSWNDIPHALFHGSMDNSAKDEQIRIFQEE--RDILVTTEIGGEGRNLQFCCQMVN- 521 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + L W+ + +Q I RI + G + V +Y L +I++ +L+ L K + +++ Sbjct: 522 YDLPWNPMKIEQRIGRI-----HRIGQDKQVMIYNLCNAGSIEDHILEILDRKINMFEMV 576 Query: 195 LNAL 198 + + Sbjct: 577 IGEV 580 >gi|148702943|gb|EDL34890.1| mCG123397, isoform CRA_a [Mus musculus] Length = 184 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 56/162 (34%), Gaps = 19/162 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + K +V F + L+ ++ K +IQ Sbjct: 11 NALMHALIELRTKDPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQ 70 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 71 RFQNTEAGSPTIMLLSLKAGGVGLNLCA-ASRVFLMDPAWNPAAEDQCFDRC-----HRL 124 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V + I +++++E +L+ TK + K + Sbjct: 125 GQKQEVIITKFIVKDSVEENMLKIQNTKRDLAAGAFGTKKTD 166 >gi|71653576|ref|XP_815423.1| DNA excision/repair protein SNF2 [Trypanosoma cruzi strain CL Brener] gi|70880477|gb|EAN93572.1| DNA excision/repair protein SNF2, putative [Trypanosoma cruzi] Length = 773 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 64/223 (28%), Gaps = 37/223 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----------- 50 +QY + D+ + + ++ + ++ ++E Sbjct: 391 QQYFSLLKTERVDVTLRSADTSQPLVLLTSLMRTCDHPWLSLSDEAYREAMQNPLAIPEA 450 Query: 51 -------VHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFPQG---------- 91 ++ KI ++ K +V L L A Sbjct: 451 NRNFGDALNSSKISLAIALVVKCIGEQRKTLVFSRSKRLLDLLAVALRCWWIDFARLDGD 510 Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ T+Q +N ++ + G GL + ++ W+ + Sbjct: 511 VPAEERLKTVQGFNQSERLLVCLLTTQVGGVGLT-VEAASAVIIMDPSWNPSS-----DA 564 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + R + G R V VY LI T++E V + K Sbjct: 565 QAIDRVHRIGQTRDVVVYRLITCGTVEEKVYRNQVFKVMAAKQ 607 >gi|258567128|ref|XP_002584308.1| hypothetical protein UREG_04997 [Uncinocarpus reesii 1704] gi|237905754|gb|EEP80155.1| hypothetical protein UREG_04997 [Uncinocarpus reesii 1704] Length = 1183 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 6/85 (7%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + G GLNL N + WW +E + R + G + V V Sbjct: 1080 NILLISLRAGGVGLNLTA-ANHVYMMDPWWSFA-----VEAQAIDRVHRMGQLKDVKVTR 1133 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLL 194 + +N+I+E +L+ K I L Sbjct: 1134 FVVKNSIEERMLRVQERKMMIAGSL 1158 >gi|58219008|ref|NP_001010895.1| RAD26L hypothetical protein [Homo sapiens] gi|74756405|sp|Q5T890|RAD26_HUMAN RecName: Full=Putative DNA repair and recombination protein RAD26-like gi|55957855|emb|CAI16517.1| chromosome 9 open reading frame 102 [Homo sapiens] gi|187954497|gb|AAI40703.1| Chromosome 9 open reading frame 102 [Homo sapiens] Length = 712 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 520 KMKVLQQLLNHCRKNRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 564 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N++V F W+ Sbjct: 565 LDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPAN--- 620 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 621 --DLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAK 673 >gi|296418213|ref|XP_002838736.1| hypothetical protein [Tuber melanosporum Mel28] gi|295634697|emb|CAZ82927.1| unnamed protein product [Tuber melanosporum] Length = 1100 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 9/166 (5%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 Y + H ++ +++I + D + Sbjct: 907 HSYKMQLLKSIVEHSIRLG-DKILIFSHGVYTLNYLDKLLEDWKIDFLRLDGKTRMSTRQ 965 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N G+ + + G GLNL G N ++ F W M E V R + Sbjct: 966 SATKSFNSGRSDVFLVSTEAGGLGLNL-PGANRIIIFDFKWSP-----MWEEQAVGRAYR 1019 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 G K+ VFVY A T ++L ++ KS +Q +++ K++ + Sbjct: 1020 MGQKKHVFVYRFHAVGTFEDLKRNKILFKSQLQSRVVD--KQDPLR 1063 >gi|297304199|ref|XP_001099671.2| PREDICTED: transcriptional regulator ATRX isoform 2 [Macaca mulatta] Length = 2338 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 1925 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 1983 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 1984 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 2037 >gi|194224690|ref|XP_001916162.1| PREDICTED: similar to RAD26L hypothetical protein [Equus caballus] Length = 1481 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 63/165 (38%), Gaps = 19/165 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---------- 97 + K+K L+ ++ N +++ L LQ+ + Sbjct: 447 PKYSGKMKVLQQLLNHCRKNKDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGNTKSEDR 506 Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++E+N + + + + G GLN G N++V F W+ + + R Sbjct: 507 IKIVKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPAN-----DLQAIDRA 560 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V V LI+ T++E++ R K + +++ + + Sbjct: 561 YRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 605 >gi|168041184|ref|XP_001773072.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] gi|162675619|gb|EDQ62112.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] Length = 2529 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 71/225 (31%), Gaps = 59/225 (26%) Query: 28 KTVKCLQLANGAVY-----YDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 K ++ ++ N Y + K+ L+ I+ K + +++ Sbjct: 1499 KCMELRKVCNHPYLNYPPRYHSQGDMIVRTCGKLWILDRILVKLHKTGHRVLLFSTMTRL 1558 Query: 81 LARLQKAFPQGRTLDKD----------PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYG 128 L L+ R + + I E+N + + G GLNLQ Sbjct: 1559 LDILEDYLQWRRLVYRRIDGMTTLEARESAIVEFNRPNSDCFIFLLSIRAAGRGLNLQT- 1617 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNT----------- 175 + ++ + + + E V R + G KR V V Y+ + +NT Sbjct: 1618 ADTVIVYDPDPNPKN-----EEQAVARAHRIGQKREVRVLYMEAVVENTPSYEKEDELRS 1672 Query: 176 ---IDELVLQR------------------LRTKSTIQDLLLNALK 199 +D+ + + K + D ++NA + Sbjct: 1673 GGSLDQKDDEMAGKDRYVGSVESLVRNNIQQHKIDMADEVINAGR 1717 >gi|3420753|gb|AAC31920.1| helicase domain-containing protein [Dictyostelium discoideum] Length = 344 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 6/111 (5%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +++ N+ + + G GL L ++F L W Sbjct: 11 QNRNDYVNDFQNDPNCRVAVLSITAAGTGLTLTA-ATCVIFAELSWTPGVLF-----QAE 64 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G +V V YLIA T+DE++ + +K T+ +L+ ++++ Sbjct: 65 DRAHRYGQTSSVLVQYLIALGTVDEMIWSLVESKKTLLGRVLDDEDGQSLN 115 >gi|313238286|emb|CBY13372.1| unnamed protein product [Oikopleura dioica] Length = 1487 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 9/119 (7%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 T K I+ +N+ + L + G G NL G N ++ F Sbjct: 1140 NIDYFRIDGSVTAAKRTTFIESFNDLEDPRARLFLVSTKAGGIGTNL-VGANRVIIFDSS 1198 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + + R + G ++VFVY + T++E + +R KS++ +++ Sbjct: 1199 WNPAH-----DVQSLFRVYRFGQTKSVFVYRFVGHGTMEEKIYERQVNKSSLGLRVVDE 1252 >gi|281208788|gb|EFA82963.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 428 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 54/120 (45%), Gaps = 7/120 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 S ++ I ++ + IP++ + G G+NL N+++F+ + Sbjct: 288 SMQDISFCRLDGTTPVNDRQDIIDLFSGDKTIPVMLLSTLAGGLGINLT-CANVVIFYDI 346 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ + +ER R + G ++ V+++ +I +++D +L+ TK + D +L Sbjct: 347 SFNPQ-----VERQAEDRAHRLGQEKTVYIHRIIVDDSVDNNILEMSTTKRELNDSMLEE 401 >gi|269795481|ref|YP_003314936.1| DNA/RNA helicase [Sanguibacter keddieii DSM 10542] gi|269097666|gb|ACZ22102.1| DNA/RNA helicase, superfamily II, SNF2 family [Sanguibacter keddieii DSM 10542] Length = 690 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 66/205 (32%), Gaps = 22/205 (10%) Query: 5 HKFQRELYCDLQGENIEAF--NSASKTVKCLQLANGAVYYDE----EKHWKEVHDEKIKA 58 +R +L+ +A N + + Q G K V K Sbjct: 477 ELVRRVAAAELKDSTSKAGGENVFTMVRRIGQAKAGPAADYAAQLARSVGKVVFFAKHVD 536 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 + E+ A I D ++ + ++ ++ + Sbjct: 537 VMDQAEQLFADRGIRYASIRGDQT----------PKVREKNITAFVEDPEVQVVVCSLTA 586 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNLQ N+++ W E+ + R + G V + +IA T+D Sbjct: 587 AGVGLNLQVASNLVLAELSWTYAEQT------QAIDRIHRIGQAEPVTAWRIIAAQTVDS 640 Query: 179 LVLQRLRTKSTIQDLLLNALKKETI 203 + + + +KS + L+ ++ + Sbjct: 641 RIAELIDSKSGLAARALDGADEDDL 665 >gi|123407009|ref|XP_001302911.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121884245|gb|EAX89981.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 2169 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 65/212 (30%), Gaps = 36/212 (16%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------------DEKIKALEVI 62 G I++ ++ ++ N + + + K L+ + Sbjct: 504 NGGEIDS---LQESNTFQRICNHPFLIEGVEDYFMARNPGVSKLDMLVNTSAKFIFLDRV 560 Query: 63 I--EKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDPCTIQEW--NEGK 108 + K +++ + + + + I ++ N G Sbjct: 561 LPCFKKQGRSVLIFSQKVKVLKLLEEYCQLKRYTYEILNGNLSEQEKKEAISKFCDNSGD 620 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + S GLNL N+ + F W+ + + + R + G + V V Sbjct: 621 AFIFLISTRSGAEGLNLTR-ANVTIVFDPDWNPQN-----DIQALGRCHRIGQTQKVDVI 674 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 L+ T + + R + K + + +L K+ Sbjct: 675 RLLTFGTYEHEMYIRSQRKLKLWNSILGDGKQ 706 >gi|255953435|ref|XP_002567470.1| Pc21g04240 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589181|emb|CAP95321.1| Pc21g04240 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1220 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 6/88 (6%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL + + WW IE + R + G R V Sbjct: 1113 PAPTVLLISLRAGGVGLNLTS-ASNVFIMDPWWSFA-----IEAQAIDRVHRMGQTRDVN 1166 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V + +++I+ +L+ K I L Sbjct: 1167 VTRFVVKDSIEGRMLRVQERKMNIAGSL 1194 >gi|78045450|ref|YP_361700.1| DNA helicase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78033954|emb|CAJ19953.1| DNA helicase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 675 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 58/177 (32%), Gaps = 11/177 (6%) Query: 22 AFNSASKTVKCLQ-LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + + +K + Q L + E +K I+ + +A F Sbjct: 471 SLTALAKIGRLRQYLERQKADWLIETIAGFEPSDKAL----IMCEFQDTVEYLAEEFAKA 526 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + K + +E + + G G L NI+ F SL W Sbjct: 527 GIEVVTFLGKHSKARKQQAIDRFQSEPTVRCFIGTTKAAGVGHTLTA-ANIVCFASLPWT 585 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G KR V V + TIDE + ++ K+ I++ LL Sbjct: 586 NALK-----KQAEDRAWRYGQKRVVTVLVPLFAGTIDEQAMALIQHKAAIENDLLED 637 >gi|606833|gb|AAC50069.1| helicase II [Homo sapiens] Length = 1641 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 1221 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 1279 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 1280 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 1333 >gi|218289657|ref|ZP_03493877.1| SNF2-related protein [Alicyclobacillus acidocaldarius LAA1] gi|218240307|gb|EED07490.1| SNF2-related protein [Alicyclobacillus acidocaldarius LAA1] Length = 572 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 59/140 (42%), Gaps = 7/140 (5%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 E +I + + +G ++E KI +L A S Sbjct: 389 PEKVIIFTEYRASQDFLMYTLKKHGISAVPFRGGFRRGKKDWMRELFSKKIRVLVAT-ES 447 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+NLQ+ + ++ + L W+ +Q I RI + G + + +L+ ++TI+E Sbjct: 448 GGEGINLQF-CHHMINYDLPWNPMRLEQRIGRI-----HRLGQTHSCHIVHLVTKDTIEE 501 Query: 179 LVLQRLRTKSTIQDLLLNAL 198 +++ L+ K + + ++ L Sbjct: 502 HIMEILQEKVRMFEAVIGRL 521 >gi|301615850|ref|XP_002937382.1| PREDICTED: helicase-like transcription factor [Xenopus (Silurana) tropicalis] Length = 956 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 19/163 (11%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDK 96 + + AL K IV F S L+ + T K Sbjct: 777 MCSTKINALMHALVDQRRKDATVKSIVVSQFTSFLSVIEVALRESGFMFTRLDGSMTQKK 836 Query: 97 DPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 IQ + ++ + G GLNL + + W+ +Q +R Sbjct: 837 RTEAIQSFQRPDAQSPTIMLLSLKAGGVGLNLTA-ASRVFLMDPAWNPAAEEQCFDRC-- 893 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + V V + +N+++E +L+ K + Sbjct: 894 ---HRLGQTKKVIVTKFVVRNSVEENMLKIQSKKRELAAGAFG 933 Score = 36.3 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 6/47 (12%), Positives = 13/47 (27%), Gaps = 6/47 (12%) Query: 2 KQYHKFQRELYC----DLQGENIEA--FNSASKTVKCLQLANGAVYY 42 + Y + E + I + + + V+ QL Sbjct: 623 QIYESLKNEGKAVISRYVSEGTILSHYADVLAVLVRLRQLCCHPFLV 669 >gi|237842313|ref|XP_002370454.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] gi|211968118|gb|EEB03314.1| SNF2 family N-terminal domain-containing protein [Toxoplasma gondii ME49] gi|221502587|gb|EEE28307.1| helicase, putative [Toxoplasma gondii VEG] Length = 1231 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 16/146 (10%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-EGKIPLLFAHP 116 +IV H + L +++ DK ++E+ + Sbjct: 947 GMKVIVFAHHRAVLDYIEEFLQAEAKRTIRIDGRTPQDKREQLVKEFQTSPSCQVALLSI 1006 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 +CGHGLNL G +VF L+W + Q +R +V ++YLIA+ T+ Sbjct: 1007 TACGHGLNLTAAGT-VVFAELYWVPGQMIQAEDRSHRI----GTEFSSVQIHYLIAEGTL 1061 Query: 177 DELVLQRLRTKSTIQDLLLNALKKET 202 DE V + L+ K + L+ +++ Sbjct: 1062 DETVFRILQRKWRLMTSTLDGEQQQL 1087 >gi|68637851|emb|CAI36056.1| superfamily II DNA/RNA helicase [Pseudomonas syringae pv. phaseolicola] Length = 652 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 36/208 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ L ++ + Sbjct: 457 QVERD---EYNRIMRSDQHRFARLGALRQL---------------LERVKVRILADLMAE 498 Query: 66 AN-AAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ-EWNEGKIPLLF 113 + +I+ + +A L++ + + K I + + Sbjct: 499 LDVDDKVILFCEYQESVATLREHCLKMGVGCVTLVGSDSPKKRQKAIDAFQQDPDCRVFI 558 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 559 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAE 612 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 +TID+ + Q L K + L++ +E Sbjct: 613 DTIDQQLWQMLMDKRALASDLIDRDAEE 640 >gi|307176622|gb|EFN66090.1| Transcriptional regulator ATRX [Camponotus floridanus] Length = 2405 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 9/120 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 L + + + +N+ + L + G G+NL N ++ F Sbjct: 2005 LGLDYFRLDGQTSAENRNIWCKIFNKPTNTRARLFLISTRAGGLGINLTA-ANRVIIFDA 2063 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q I RI + G K+ ++Y +A T++E + R TK ++ +++ Sbjct: 2064 SWNPSHDVQSIFRI-----YRFGQKKPCYIYRFLAAGTMEEKIYNRQVTKLSLSCRVVDE 2118 >gi|149186589|ref|ZP_01864901.1| putative helicase (Snf2 family) protein [Erythrobacter sp. SD-21] gi|148829816|gb|EDL48255.1| putative helicase (Snf2 family) protein [Erythrobacter sp. SD-21] Length = 992 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 58/174 (33%), Gaps = 14/174 (8%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR---------LQ 85 + + + + ++ L I + +I+ F + + Sbjct: 443 ICDNSRVLASLEASDTKFQRLVEWLRKIRQDHPDEKVIIFSSFRKTIDYLARRLEDAGFE 502 Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G + + + + G GL+LQ+ IL + L W+ + Sbjct: 503 SIELHGGIDLDRQTIVNSFADAPAGTVLLTSEVGGEGLDLQF-CRILFNWDLPWNPMRVE 561 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q I RI Q ++ + LIA+ TI+E V +RL + I L + Sbjct: 562 QRIGRIDRIGQ----QSPSIDIINLIAEKTIEERVYERLYERLGIIRSTLGDFE 611 >gi|115690971|ref|XP_001203541.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115733996|ref|XP_001199700.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 221 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 23/175 (13%) Query: 43 DEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQ----------KAF 88 +E+ + K+ AL + IV F S L L+ Sbjct: 29 NEDTEREWHSSAKVDALMECLLTERAADKTTKSIVVSQFTSFLDLLKKPLTEKGFKFCRL 88 Query: 89 PQGRTLDKDPCTIQEW--NEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I+E+ N+ P + + G GLNL + L W+ + Sbjct: 89 DGSMSRIARTAAIREFSSNDPDSPQIFLLSLKAGGVGLNLTA-ASRLYLLDPAWNPACEE 147 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q +R + G + V + + +++++E +L+ TK + + + Sbjct: 148 QCFDRC-----HRLGQTKDVTITKFLVRDSVEEAMLELQETKRQLMKNVFGGKNQ 197 >gi|310792112|gb|EFQ27639.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1103 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 17/144 (11%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLL 112 +V + S L +Q A + + ++ + ++ Sbjct: 942 PHEPPYKSVVFSTWTSHLDLIQMALDNVGIKYVRLDGSMTRVARTQAMDSFRDDNSVHVI 1001 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G + + ++ Q I+R+ + G KR V I Sbjct: 1002 LVSITAGGLGLNLTAGSS-VYVMEPQYNPAAEAQAIDRV-----HRLGQKRPVRTVRYIM 1055 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 +N+ +E +L+ K+ + L ++ Sbjct: 1056 RNSFEEKMLELQEKKNKLASLSMD 1079 >gi|240169371|ref|ZP_04748030.1| SNF2 family helicase [Mycobacterium kansasii ATCC 12478] Length = 2150 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 6/111 (5%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 F + + TI + G+ P++ + G NLQ+ N ++ + L W+ +Q Sbjct: 541 FHGSMSASERAATIAAFRSGEAPVMI-STDAGAEGQNLQF-CNCVLNYDLPWNPMRIEQR 598 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 I R+ Q + VFV L A TIDE V + L K + +LL + Sbjct: 599 IGRVDRLTQPRD----EVFVANLYACRTIDESVYRLLAEKLRMFELLFGQV 645 >gi|295670543|ref|XP_002795819.1| DNA repair protein rad5 [Paracoccidioides brasiliensis Pb01] gi|226284904|gb|EEH40470.1| DNA repair protein rad5 [Paracoccidioides brasiliensis Pb01] Length = 1187 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E +L + G GLNL N + WW Q I+R+ + G R V Sbjct: 1079 ESPPNVLLISLRAGGVGLNLTT-ANHVFMMDPWWSFATEAQAIDRV-----HRMGQLRDV 1132 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V I +++I+ +L+ K I L Sbjct: 1133 TVTRFIVKDSIEGRILKIQERKMMIAGSL 1161 >gi|296419114|ref|XP_002839164.1| hypothetical protein [Tuber melanosporum Mel28] gi|295635170|emb|CAZ83355.1| unnamed protein product [Tuber melanosporum] Length = 759 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 50/170 (29%), Gaps = 31/170 (18%) Query: 53 DEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 KI+ L ++ K IV F S L ++ + D + Sbjct: 503 STKIRYLLAVLRKELKLKNKTIVFSQFTSMLDLIEPFLHRNGIAFTRYDGSMKNDDREAS 562 Query: 101 IQEWNEGK-------------IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ +L GLNL +V +W+ Sbjct: 563 LRRLRGEGEYAPSPGKEDRSWCGVLLCSLKCGALGLNLTAAC-RVVILEPFWNP-----F 616 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E + R + G + V VY + +++E +LQ K + Sbjct: 617 VEEQAIDRVHRIGQETDVVVYKITVAGSVEERILQLQDQKRELAKAAFGD 666 >gi|289628760|ref|ZP_06461714.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 602 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 64/200 (32%), Gaps = 33/200 (16%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPII 72 + + ++ QL + K++ L ++ + + +I Sbjct: 414 EYNQIMRSDQHRFARLGALRQL---------------LERVKVRILADLMAELDVDDKVI 458 Query: 73 VAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGH 121 + + +A L++ + K I + + ++ G Sbjct: 459 LFCEYQESVATLREHCLKMGVGCVTLIGSDSPKKRQKAIDAFQQDPDCRVFIGTRSAAGT 518 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G NL N + F L W R + G R V V +A++TID+ + Sbjct: 519 GYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRVVVVKIPLAEDTIDQQLW 572 Query: 182 QRLRTKSTIQDLLLNALKKE 201 Q L K + L++ +E Sbjct: 573 QMLMDKRALASDLIDPDAEE 592 >gi|241950577|ref|XP_002418011.1| DNA repair protein, putative [Candida dubliniensis CD36] gi|223641350|emb|CAX43310.1| DNA repair protein, putative [Candida dubliniensis CD36] Length = 1088 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 57/185 (30%), Gaps = 25/185 (13%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 + L N + + + + + K + + + II Sbjct: 900 DFQLYLYDPNRSSSKIQALIRHLK------ALHSQSPNSKVIVFSQFSSYLDIIHSELKL 953 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN----EGKIPLLFAHPASCGHGLNL 125 F D ++ ++ +N GKI +L +CG GLNL Sbjct: 954 ASEDFIVFKFDGRL---------NMNDRTKLLESFNQPLDNGKIAILLLSLKACGVGLNL 1004 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + WW Q I+RI + G V V I +N+I+ +L+ Sbjct: 1005 TT-ASRAYMMDPWWSPSIEDQAIDRI-----HRIGQNETVKVVRFIMENSIETKMLKIQE 1058 Query: 186 TKSTI 190 K I Sbjct: 1059 RKKQI 1063 Score = 35.1 bits (79), Expect = 6.3, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 10/43 (23%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANG 38 K Y F+ Y + ++ Q+ Sbjct: 718 KLYQWFKDRAYASFAEGIKSGQLLRRYTQILTHILRLRQVCCH 760 >gi|145539209|ref|XP_001455299.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423098|emb|CAK87902.1| unnamed protein product [Paramecium tetraurelia] Length = 1741 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 7/111 (6%) Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ + ++N + I +L G GLNL NI++ F ++ + + Sbjct: 1577 SVPQNQRYPLVTKFNEDPDIRVLLLTTQVGGLGLNL-SSANIVIMFDHDYNP-----VND 1630 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + + R + G K V V+ LI ++T++E ++ R KS I ++N Sbjct: 1631 QQAMDRAHRIGQKNVVQVFRLIVKDTLEEKIMGIQRFKSAISKAIVNQDNA 1681 >gi|94266483|ref|ZP_01290174.1| Helicase-like [delta proteobacterium MLMS-1] gi|93452898|gb|EAT03409.1| Helicase-like [delta proteobacterium MLMS-1] Length = 137 Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ WW+ +E R + G +R V +Y L+ + +I+E +L Sbjct: 49 LTAADYVIHLDPWWNPA-----VEDQASDRAHRIGQERPVTIYRLVTKGSIEEKILALHG 103 Query: 186 TKSTIQDLLL 195 K + + LL Sbjct: 104 HKRDLAENLL 113 >gi|8777308|dbj|BAA96898.1| unnamed protein product [Arabidopsis thaliana] Length = 1053 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 65/223 (29%), Gaps = 36/223 (16%) Query: 8 QRELYCDLQGENIEAF----NSASKTVKCLQLANGAVYYDEE--KHWKEVHDEKIKALE- 60 QR+LY I + + ++ + + + + E D + E Sbjct: 632 QRQLYEAFLNSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDSTLTQEEA 691 Query: 61 ----------------VIIEKANAAPIIVAYHFNSDLA------RLQKAFPQGRTLDKDP 98 + N + S L Sbjct: 692 GVAERLAMHIADNVDTDDFQTKNDSISCKLSFIMSLLDSLTSNGYSFLRIDGTTKAPDRL 751 Query: 99 CTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++E+ EG + P+ G GL L + ++ W+ Q ++R Sbjct: 752 KTVEEFQEGHVAPIFLLTSQVGGLGLTLTK-ADRVIVVDPAWNPSTDNQSVDR-----AY 805 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V VY L+ T++E + ++ K + ++ Sbjct: 806 RIGQTKDVIVYRLMTSATVEEKIYRKQVYKGGLFKTATEHKEQ 848 >gi|330804465|ref|XP_003290215.1| hypothetical protein DICPUDRAFT_98608 [Dictyostelium purpureum] gi|325079679|gb|EGC33268.1| hypothetical protein DICPUDRAFT_98608 [Dictyostelium purpureum] Length = 1514 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 60/160 (37%), Gaps = 11/160 (6%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD---LARLQKAFPQGRTLDKDPC 99 DEE + + K + ++ + ++ F + L + L K Sbjct: 1224 DEELSKLPLPEGKNQFKCLVFSQWTRFLDLIEECFKHNGWNLDEHYCRYDGKVPLKKRES 1283 Query: 100 TIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+E+ G ++ G GLNL N++ +W+ +E + R Sbjct: 1284 IIKEFSRESGGPRVMLISLKCGGVGLNLHR-ANMVYMCDPYWNSA-----VEEQAIGRVD 1337 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + + + ++TI+E ++ TK +++L+ Sbjct: 1338 RLNQTRDLKIKRFVMRDTIEERIMALQDTKKINSNIILSD 1377 >gi|327300655|ref|XP_003235020.1| hypothetical protein TERG_04072 [Trichophyton rubrum CBS 118892] gi|326462372|gb|EGD87825.1| hypothetical protein TERG_04072 [Trichophyton rubrum CBS 118892] Length = 1877 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 68/193 (35%), Gaps = 10/193 (5%) Query: 8 QRELYCDLQGENIEAFNSASKT-VKCLQL--ANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + +++G+ S+ K + + + ++ DE IKA + I+ Sbjct: 1275 VEDDVLEIEGQTAITDEVVSQFEQKFKDIKDLDSPKNSHRTQMVGQIVDESIKAGDKILI 1334 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPASCGHGL 123 + + D + G+T +++ + + + GL Sbjct: 1335 FSGYLHTLSYLGSMLDARGHKYCRLDGKTPIATRQAATRDFRDSDAHVYLISTKAGALGL 1394 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 N+ G N ++ F ++ E + R + G + VFVY + T +EL+ ++ Sbjct: 1395 NI-IGANRVIIFESEYNPT-----WEEQAIGRAYRLGQTKDVFVYRFVMGGTFEELIHEK 1448 Query: 184 LRTKSTIQDLLLN 196 K + ++ Sbjct: 1449 GIFKKNMALRAID 1461 >gi|325274896|ref|ZP_08140906.1| DNA helicase [Pseudomonas sp. TJI-51] gi|324099980|gb|EGB97816.1| DNA helicase [Pseudomonas sp. TJI-51] Length = 659 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 65/207 (31%), Gaps = 36/207 (17%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK-A 66 + + + A K K QL + K L I Sbjct: 462 RDQYLAAVSDNTQTAI---VKIGKIRQL---------------LERLKASWLIDTITSLG 503 Query: 67 NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAH 115 + I+ + +A F + + I + + + + Sbjct: 504 DDDKSIIFCEYTESVAYLADEFAKAGIQTVTFTGSNSGTRKQKAIDTFMSDPAVKVFIGT 563 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLNL N + F SL W R R + G KRAV V + T Sbjct: 564 TKAAGVGLNLVA-ANYVFFASLPWTAAAK-----RQAEDRAYRNGQKRAVTVLMPVISGT 617 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKET 202 IDE V+ L+ K +I+ LL+ ++ Sbjct: 618 IDEQVVLLLQHKESIEQDLLDDSVQDP 644 >gi|145503894|ref|XP_001437919.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124405080|emb|CAK70522.1| unnamed protein product [Paramecium tetraurelia] Length = 1741 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 7/124 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + ++N + I +L G GLNL NI++ F Sbjct: 1564 TQFPGLQYLILDGSVPQTQRYPLVTKFNEDPDIRVLLLTTQVGGLGLNL-SSANIVIMFD 1622 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ + ++ + R + G K V V+ LI ++T++E ++ R KS I ++N Sbjct: 1623 HDYNP-----VNDQQAMDRAHRIGQKNVVQVFRLIVKDTLEEKIMGIQRFKSAISKAIVN 1677 Query: 197 ALKK 200 Sbjct: 1678 QDNA 1681 >gi|63054489|ref|NP_593038.2| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces pombe 972h-] gi|38258935|sp|Q09772|RDH54_SCHPO RecName: Full=Meiotic recombination protein rdh54; AltName: Full=ATP-dependent helicase rdh54; AltName: Full=Meiotically up-regulated gene 34 protein; AltName: Full=RAD54 protein homolog 2 gi|30519798|emb|CAA91068.3| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces pombe] gi|31323296|gb|AAP44116.1| meiotic recombination factor Rdh54 [Schizosaccharomyces pombe] Length = 811 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 66/207 (31%), Gaps = 37/207 (17%) Query: 26 ASKTVKCLQLANGAVYYDEEKHW----------------KEVHDEKIKALEVIIEKANA- 68 + ++ N + EK + K++ L +++ Sbjct: 488 LKILTRLSKICNSTILLRNEKENFLSTELQDKHVFEQENMLLSSSKLQILAALLKSFQRG 547 Query: 69 -APIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIP---LLFA 114 ++ + L ++ + + +N +L Sbjct: 548 CQKAVIVSQYKETLELIELFLSILHVRFCKLLGSTPFSERDLIVHNFNTSSFKEFSVLLL 607 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL G L+ + W+ + + ++R ++G KR V +Y ++ Sbjct: 608 SSKAGGCGLNLT-GSTRLIIYEPSWNPAQ-----DLQALSRIYRSGQKRPVCIYTFLSSG 661 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 +DE + R TK + +++ + Sbjct: 662 MLDERIFIRQNTKQGLSSSFIDSDASQ 688 >gi|94265886|ref|ZP_01289615.1| Helicase-like [delta proteobacterium MLMS-1] gi|93453581|gb|EAT03980.1| Helicase-like [delta proteobacterium MLMS-1] Length = 137 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ WW+ +E R + G +R V +Y L+ + +I+E +L Sbjct: 49 LTAADYVIHLDPWWNPA-----VEDQASDRAHRIGQERPVTIYRLVTKGSIEEKILALHG 103 Query: 186 TKSTIQDLLL 195 K + + LL Sbjct: 104 HKRDLAENLL 113 >gi|329929408|ref|ZP_08283156.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] gi|328936495|gb|EGG32940.1| SNF2 family N-terminal domain protein [Paenibacillus sp. HGF5] Length = 610 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQ 102 + K + +I++ N +IV + D + + G K + Sbjct: 401 NTKAEKAIELIQQMN-EKVIVFTEYRATQEYLLNYFRDHGLISVPYRGGMNRGKKDWMMD 459 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + GK ++ A + G G+NLQ+ + ++ F L W+ +Q I R+ + G Sbjct: 460 LFR-GKAQVMIAT-EAGGEGINLQF-CHHMINFDLPWNPMRVEQRIGRV-----HRLGQT 511 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V +Y L TI+E +L L K + ++++ L Sbjct: 512 NDVKIYNLSTSGTIEEHILNLLHEKINMFEMVIGGL 547 >gi|296412641|ref|XP_002836031.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629831|emb|CAZ80188.1| unnamed protein product [Tuber melanosporum] Length = 876 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 26/201 (12%), Positives = 71/201 (35%), Gaps = 24/201 (11%) Query: 11 LYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 D++ + N ++ + K G + + ++K ++ Sbjct: 669 ALLDIKSDYNEDSVQDLQRRKKLKGRYGGPSTKVKALISSLLENKKASTT------SSPI 722 Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 +V + S + ++ AF T + ++++ +I ++ + Sbjct: 723 KSVVFSCWTSHMDLIEIAFKDNGINFVRLDGSMTRTQRNRVMEDFERAPEISVILISIMA 782 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL ++ Q I+RI + G R V I +++ + Sbjct: 783 GGLGLNLTAAC-KAYVMEPQFNPAAESQAIDRI-----HRLGQTRPVTTTRYIMRDSFEM 836 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +++ + K+ + +L +++ + Sbjct: 837 KIVELQKKKTELANLSMSSGR 857 >gi|116207162|ref|XP_001229390.1| hypothetical protein CHGG_02874 [Chaetomium globosum CBS 148.51] gi|88183471|gb|EAQ90939.1| hypothetical protein CHGG_02874 [Chaetomium globosum CBS 148.51] Length = 1558 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 54/157 (34%), Gaps = 19/157 (12%) Query: 53 DEKIKALEVIIEKANA--APIIVAYH-----------FNSDLARLQKAFPQGRTLDKDPC 99 KI L I+++ ++V F Q+ + + Sbjct: 1061 SNKIVVLLRILDECKKAKDKVLVFSQSIPTLDYIENIFKRKRVVYQRLDGSTKMSTRQAS 1120 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + + S G GLN+ G N +V F + + Q + R + Sbjct: 1121 VKKFNTDAESQVYLVSTRSGGVGLNIH-GANRVVIFDFKYSPTDEQ-----QAIGRAYRL 1174 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V+VY+L T ++ + K+ + +++ Sbjct: 1175 GQTKPVYVYWLTVGGTFEDTIHNNAIFKAQLAKRVVD 1211 >gi|322787016|gb|EFZ13240.1| hypothetical protein SINV_08607 [Solenopsis invicta] Length = 1002 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 8/149 (5%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI--PL 111 +K +I+ + ++A H +S F + I+ +N + Sbjct: 844 QKGNDKLIIVSQWAMLLEVIASHLSSIKGATYSKFTGSVAIKDRQNVIESFNRPNSGPRI 903 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G GGN L+ F + W+ + Q +RI + G K+ V+VY + Sbjct: 904 LLLSLT-AGGVGLNLVGGNYLLLFDIHWNPQLESQAQDRI-----YRFGQKKNVYVYKFV 957 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKK 200 NTI+E + K I +L K Sbjct: 958 CVNTIEERIKALQERKLEIAKNVLTGDKA 986 >gi|326468582|gb|EGD92591.1| hypothetical protein TESG_00164 [Trichophyton tonsurans CBS 112818] Length = 1811 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 55/157 (35%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPC 99 + + + + II++ I++ + L+ + Sbjct: 1283 NSHRTQMVGQIIDESIKAGDKILIFSGYLHTLSYLGSMLEARGHKYCRLDGKTPIATRQA 1342 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++ + + + + GLN+ G N ++ F ++ E + R + Sbjct: 1343 ATRDFRDSDVHVYLISTKAGALGLNI-IGANRVIIFESEYNPT-----WEEQAIGRAYRL 1396 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VFVY I T +EL+ ++ K + ++ Sbjct: 1397 GQTKDVFVYRFIMGGTFEELIHEKGVFKKNMALRAID 1433 >gi|530788|gb|AAA20872.1| X-linked nuclear protein [Homo sapiens] gi|1588601|prf||2209217A ATR-X gene Length = 1298 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 940 RNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 998 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 999 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 1052 >gi|71980419|ref|NP_001020958.1| human XNP gene related family member (xnp-1) [Caenorhabditis elegans] gi|3253105|gb|AAC24256.1| Human xnp gene related protein 1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 1359 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 43/117 (36%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 K +N+ + L+ + G N+ N ++ F W+ Sbjct: 1015 DYMTIDGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNMVA-ANRVIIFDACWN 1073 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G + V++Y IAQ T++E + +R TK + +++ Sbjct: 1074 PSH-----DTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDE 1125 >gi|328869586|gb|EGG17963.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1429 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 26/167 (15%) Query: 50 EVHDEKIKALEVIIEKAN----AAPIIVAYHFNSDLARLQK---------------AFPQ 90 + + K+ + I +A A I++ + S L R++ Sbjct: 1202 DKNSAKLTRMLDDINEAKRNDRDAKIVIFSQWTSMLNRVEMLLIEKNIMPTEHYLRYDGT 1261 Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K G+ +L + G GLNL N ++ WW+ Q I+ Sbjct: 1262 MTPNAKRAAVETFQTTNGEPRILLISLKAGGVGLNLTR-ANHVIVLDPWWNSSAEDQAID 1320 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G + V+V + Q +I+E VL+ R K ++ +L+ Sbjct: 1321 RV-----HRIGQLKHVYVKKYVIQASIEERVLELQRAKESMTKAILD 1362 Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 28/114 (24%), Gaps = 16/114 (14%) Query: 3 QYHKFQRELYCDLQG------ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 Y + E L + + S ++ Q+ + +EV E Sbjct: 1042 IYDQLFSESSAILDDLFRRGLQMLNYGYILSLILRLRQVCDHTSLIVRTSQEEEVTTEFC 1101 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 I+ F + + +D Q + + K P Sbjct: 1102 SMCGDILI----------SPFIQGICNHKYCMACVLETFRDQSITQHFPKVKCP 1145 >gi|194379178|dbj|BAG58140.1| unnamed protein product [Homo sapiens] Length = 858 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSL 137 T +E+N+ L + G+NL N ++ F Sbjct: 445 RNIDHYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVA-ANRVIIFDA 503 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + + R + G + V+VY +AQ T+++ + R TK ++ +++ Sbjct: 504 SWNPS-----YDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD 557 >gi|50284977|ref|XP_444917.1| hypothetical protein [Candida glabrata CBS 138] gi|74691178|sp|Q6FY76|RAD5_CANGA RecName: Full=DNA repair protein RAD5 gi|49524219|emb|CAG57810.1| unnamed protein product [Candida glabrata] Length = 1151 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 23/172 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--- 96 + + + K + I+ L+ + + + ++V F+S L L+ + + +K Sbjct: 965 LIHFDRKERPAKLNALIRHLQQLQDSSAGEQVVVFSQFSSYLDILESQLNEVYSSNKLKV 1024 Query: 97 -----------DPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 ++++ +L + G GLNL + WW Sbjct: 1025 YKFDGRLSLKERTAVLEDFKVKDYAVQKVLLLSLKAGGVGLNLT-CASYAFMMDPWWSPS 1083 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q I+RI + G +V V + +I+E +L+ K T+ + + Sbjct: 1084 MEDQAIDRI-----HRIGQTNSVKVIRFVIDGSIEEKMLRIQDRKRTLGEAM 1130 >gi|168229242|ref|NP_001108200.1| helicase-like transcription factor alpha [Oryctolagus cuniculus] gi|60390953|sp|Q95216|HLTF_RABIT RecName: Full=Helicase-like transcription factor; AltName: Full=RUSH-1; AltName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3; AltName: Full=Sucrose nonfermenting protein 2-like 3 gi|1655930|gb|AAC18656.1| RUSH-1alpha [Oryctolagus cuniculus] Length = 1005 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + K +V F + L+ ++ K +IQ Sbjct: 833 NALMHALIDLRTKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQ 892 Query: 103 EWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G ++ + G GLNL + + W+ Q +R + Sbjct: 893 CFQNTEAGSPTIMLLSLKAGGVGLNLCA-ASRVFLMDPAWNPAAEDQRFDRC-----HRL 946 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G K+ V + I +++++E +L+ TK + K Sbjct: 947 GQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKK 986 Score = 35.9 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 12/43 (27%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDL----QGENIEA--FNSASKTVKCLQLANG 38 K Y + E + + A + ++ Q+ Sbjct: 673 KIYQSVKSEGKATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 715 >gi|119189989|ref|XP_001245601.1| hypothetical protein CIMG_05042 [Coccidioides immitis RS] Length = 1056 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 48/113 (42%), Gaps = 9/113 (7%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + ++ I +L A + G GLNL + + ++ Q ++R+ Sbjct: 939 QRNVALDKFRDDDNITVLLATLGAGGVGLNLTS-ASRVYIMEPQYNPAAVAQAVDRV--- 994 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKETIH 204 + G R V I + +I+E + + + K + ++ LN + K+E + Sbjct: 995 --HRLGQTREVTTVQFIMKESIEEKIAELAKKKQKLANMSLNRGKSDKREMME 1045 >gi|322821691|gb|EFZ27947.1| hypothetical protein TCSYLVIO_5838 [Trypanosoma cruzi] Length = 1530 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 54/145 (37%), Gaps = 17/145 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPL 111 I + +++ + S L L++ G + I+ + + I + Sbjct: 557 IIEGLHEKVVLFSTYRSHLFLLKQLLRKRGLLAEVMHGGLDVKDRQRIIERFTEDTSISV 616 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G G+NL N + F + W+ + + R + G +R V VY + Sbjct: 617 LLCSTKASGVGINLVA-ANHCILFDVSWNPAD-----DTQATYRLYRYGQQRPVTVYRIA 670 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 T + +V +K+ + +++ Sbjct: 671 TDGTFEHVVFFYALSKTWLHKKIVD 695 >gi|17367114|sp|Q9U7E0|ATRX_CAEEL RecName: Full=Transcriptional regulator ATRX homolog; AltName: Full=ATP-dependent helicase xnp-1; AltName: Full=X-linked nuclear protein 1 gi|5901659|gb|AAD55361.1|AF134186_1 XNP-1 [Caenorhabditis elegans] Length = 1359 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 43/117 (36%), Gaps = 9/117 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 K +N+ + L+ + G N+ N ++ F W+ Sbjct: 1015 DYMTIDGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNMVA-ANRVIIFDACWN 1073 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + R + G + V++Y IAQ T++E + +R TK + +++ Sbjct: 1074 PSH-----DTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDE 1125 >gi|159109590|ref|XP_001705059.1| Transcriptional regulator ATRX, putative [Giardia lamblia ATCC 50803] gi|157433137|gb|EDO77385.1| Transcriptional regulator ATRX, putative [Giardia lamblia ATCC 50803] Length = 1367 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 20/165 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 K +I N ++ + + L+ + Sbjct: 656 SSKYSLFMELITHIKNNNHRALIFCDYQIIFSMLEHLLSHNDIPYLRLDGTIADVSERDR 715 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +N + L GLNL G N ++ F+ W L+ +E + R + Sbjct: 716 ICKSFNANKRYTALLISIKLGSMGLNLT-GANRVILFAPAWSLQ-----VEEQAIARAYR 769 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 G K V VY L NT++E ++ R K+ I ++ L+ K ++ Sbjct: 770 MGQKHNVVVYKLACINTLEEKMVVRQLQKAGIANVTLDDEKHRSV 814 >gi|302801027|ref|XP_002982270.1| hypothetical protein SELMODRAFT_421707 [Selaginella moellendorffii] gi|300149862|gb|EFJ16515.1| hypothetical protein SELMODRAFT_421707 [Selaginella moellendorffii] Length = 825 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 24/208 (11%), Positives = 57/208 (27%), Gaps = 26/208 (12%) Query: 3 QYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK----IK 57 Y F + + + +I+ + S +L++ + + K Sbjct: 519 LYEIFVKSQFVRTMLNSDIQRAHVLSAIGALRKLSSHPGLLQSDMKHVTSAEIKNQPFFH 578 Query: 58 ALEVIIE------------KANAAPIIVAYHFNSDLARLQKAFPQ---GRTLDKDPCTIQ 102 E +++ + N + L + + + I+ Sbjct: 579 RAEELLDLSDVQASLRDVVRHNWSLSGKFVCLQHLLLATIQCNDRIVVASNFTQTLDLIE 638 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 Q LV W+ + ++R + G Sbjct: 639 AMCNEHSWKFVR-LDGGTMISERQPLVERLVLVDPDWNPAN-----DAQVMSRIWREGQP 692 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + V +Y L++ +I+E + QR K + Sbjct: 693 KPVKIYRLLSTGSIEEKIYQRQIMKKDL 720 >gi|300121395|emb|CBK21775.2| unnamed protein product [Blastocystis hominis] Length = 735 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 8/102 (7%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 K + ++ + G GLNL N + WW+ + +E + Sbjct: 616 KKRQKVETD--GEFPRIMLISLRAGGVGLNLTS-ANTVFMCDPWWN-----EAVENQAIN 667 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G KR V V+ LI +++I+E +++ + K + L+ Sbjct: 668 RVFRIGQKRKVKVFRLIIEDSIEEKIIKLQQKKEQLIQSTLD 709 >gi|270010403|gb|EFA06851.1| hypothetical protein TcasGA2_TC009794 [Tribolium castaneum] Length = 1540 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 42/118 (35%), Gaps = 9/118 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + D + +N + L + G G+NL N ++ F + W Sbjct: 1208 LDYFRLDGSSSCDSRSMWCRTFNNPTNTRARLFLISTKAGGLGINLVA-ANRVIIFDVSW 1266 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G + ++Y + T++ + +R TK I +++ Sbjct: 1267 NPSH-----DIQSIYRVYRFGQTKPCYIYRFVTLGTMEMKIYERQVTKQAISKRVIDE 1319 >gi|257486838|ref|ZP_05640879.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 650 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 68/208 (32%), Gaps = 36/208 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ + ++ + Sbjct: 457 QVERD---EYNQIMRSDTHRFARLGALRQL---------------LERVKVRIVADLMAE 498 Query: 66 AN-AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ-EWNEGKIPLLF 113 + +I+ + +A L++ + K I + + Sbjct: 499 LDVDDKVILFCEYQESVASLREHCLAMGVGCVTLVGSDSPKKRQKAIDAFQQDQDCRVFI 558 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 559 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAE 612 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 +TID+ + Q L K + L++ +E Sbjct: 613 DTIDQQLWQMLMDKRALASDLIDPEAEE 640 >gi|238588586|ref|XP_002391769.1| hypothetical protein MPER_08754 [Moniliophthora perniciosa FA553] gi|215456891|gb|EEB92699.1| hypothetical protein MPER_08754 [Moniliophthora perniciosa FA553] Length = 311 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 15/164 (9%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPI---------IVAYHFNSDLARLQKAFPQGRTLDKD 97 + + K+KA+ I + + + + K + +D Sbjct: 145 MPRFLPSTKMKAMMEEITRLAKDKPDEKWTGCLSLASDYLTEYGILHVKYQGDMNRVKRD 204 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ K P++ G GLNL N ++ L W Q +E R Sbjct: 205 QAVRVFMSKDKAPIMLMSMKCGGVGLNLTR-ANNVISLDLGWS-----QAVENQAFDRVH 258 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V + + +NT+++ +L K + D L + + Sbjct: 259 RLGQTRTVNIKRFVIKNTVEDRILVLQDRKQQLADGSLGEGQGK 302 >gi|308498547|ref|XP_003111460.1| CRE-XNP-1 protein [Caenorhabditis remanei] gi|308241008|gb|EFO84960.1| CRE-XNP-1 protein [Caenorhabditis remanei] Length = 1391 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 67/204 (32%), Gaps = 28/204 (13%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 ++ D ++ N ++ ++ +E V + +++L +I Sbjct: 960 KMVSDDDRDDYTLSNKLVLLMQIIKKC------EEIGDKLLVFSQSLESLSLIKRMLEYM 1013 Query: 70 PII--VAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEG---KIPLLF 113 + L + + + K +N + L+ Sbjct: 1014 AGTGQWFADGHEALNQEGETWSWLEGEDYMVIDGSVQTGKRDSVQTHFNSPENLRARLML 1073 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G N+ N ++ F W+ + + R + G + V++Y IAQ Sbjct: 1074 ISTRAGSLGTNMVA-ANRVIIFDACWNPSH-----DTQSLFRVYRFGQTKPVYIYRFIAQ 1127 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 T++E + +R TK + +++ Sbjct: 1128 GTMEERIYKRQVTKESTSMRVVDE 1151 >gi|302892613|ref|XP_003045188.1| SNF2 superfamily RAD5 protein [Nectria haematococca mpVI 77-13-4] gi|256726113|gb|EEU39475.1| SNF2 superfamily RAD5 protein [Nectria haematococca mpVI 77-13-4] Length = 1146 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 19/163 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN 105 + L + + +V F S L + E+ Sbjct: 982 MSELRALRREHPKMKSVVFSQFTSFLSLIEPALTKANIKYLRLDGSMAQKARAAVLTEFT 1041 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E K +L + G GLNL + WW +E + R + G + Sbjct: 1042 ERKGFTVLLLSLRAGGVGLNLTS-AGRVFMMDPWWSFA-----VEAQAIDRVHRMGQESE 1095 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDL--LLNALKKETIHV 205 V V + + +++E +L+ K I ++N +K+ + Sbjct: 1096 VQVKRFVVKESVEERMLKVQERKKFIATSLGMMNDEEKKLQRI 1138 >gi|194899382|ref|XP_001979239.1| GG24840 [Drosophila erecta] gi|190650942|gb|EDV48197.1| GG24840 [Drosophila erecta] Length = 932 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 7/115 (6%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 DL+ F + +Q++N +L + G GLNL N ++ L Sbjct: 795 QDLSWETLDFNGQLSAKDRELVLQDFNTNNDKRVLLLSLTAGGVGLNL-NVANHMLIVDL 853 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 W+ + ER R + G + F+Y + Q+T+++ + K I Sbjct: 854 HWNPQL-----ERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDYKLNIAK 903 Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 13/39 (33%), Gaps = 3/39 (7%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGA 39 + Y +F + GE I + + ++ Q Sbjct: 603 EIYDRF--HMLLGFNPGEKIFSIYTLVLLLRLRQFCCHP 639 >gi|121713498|ref|XP_001274360.1| DNA repair helicase rad5,16 [Aspergillus clavatus NRRL 1] gi|119402513|gb|EAW12934.1| DNA repair helicase rad5,16 [Aspergillus clavatus NRRL 1] Length = 1174 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 24/172 (13%) Query: 50 EVHDEKIKALEVIIEK-ANAAPIIVAYHFN----------SDLARLQKAFP----QGRTL 94 E+ K+ + +I+ P + F R + Sbjct: 976 EMPSAKLTKIRELIQNWIEENPEVKVVIFTLSLDFVRIATMMCEREGWQCYAFTGKMPIP 1035 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + + +L A + G GL++ N + LWW+ + I Sbjct: 1036 AREQSMKEFRENPEAKVLVASLKAGGIGLDMT-MANKCILVDLWWN-----EAIHEQAFC 1089 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL---KKETI 203 R + G ++ V + LI ++TIDE + Q K+ + + K++TI Sbjct: 1090 RLYRIGQQKEVEIVILIVRDTIDEYICQLQLKKTAEINSAMGEEELSKRDTI 1141 >gi|261408341|ref|YP_003244582.1| SNF2-like protein [Paenibacillus sp. Y412MC10] gi|261284804|gb|ACX66775.1| SNF2-related protein [Paenibacillus sp. Y412MC10] Length = 575 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQ 102 + K + +I++ N +IV + D + + G K + Sbjct: 366 NTKAEKAIELIQQMN-EKVIVFTEYRATQEYLLNYFRDHGLVSVPYRGGMNRGKKDWMMD 424 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + GK ++ A + G G+NLQ+ + ++ F L W+ +Q I R+ + G Sbjct: 425 LFR-GKAQVMIAT-EAGGEGINLQF-CHHMINFDLPWNPMRVEQRIGRV-----HRLGQT 476 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V +Y L TI+E +L L K + ++++ L Sbjct: 477 NDVKIYNLSTSGTIEEHILNLLHEKINMFEMVIGGL 512 >gi|71663704|ref|XP_818842.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70884114|gb|EAN96991.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 1455 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 54/145 (37%), Gaps = 17/145 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPL 111 I + +++ + S L L++ G + I+ + + I + Sbjct: 483 IIEELHEKVVLFSTYRSHLFLLKQLLRKRGLLADVMHGGLDVKDRQRIIERFTEDASISV 542 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + G G+NL N + F + W+ + + R + G +R V VY + Sbjct: 543 LLCSTKASGVGINLVA-ANHCILFDVSWNPAD-----DTQATYRLYRYGQQRPVTVYRIA 596 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 T + +V +K+ + +++ Sbjct: 597 TDGTFEHVVFFYALSKTWLHKKIVD 621 >gi|68472697|ref|XP_719667.1| hypothetical protein CaO19.9644 [Candida albicans SC5314] gi|68472956|ref|XP_719543.1| hypothetical protein CaO19.2097 [Candida albicans SC5314] gi|74680157|sp|Q5ACX1|RAD5_CANAL RecName: Full=DNA repair protein RAD5 gi|46441365|gb|EAL00663.1| hypothetical protein CaO19.2097 [Candida albicans SC5314] gi|46441494|gb|EAL00791.1| hypothetical protein CaO19.9644 [Candida albicans SC5314] Length = 1084 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 22/167 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ------------KA 87 +Y + ++ L+ + ++ + +IV F+S L +Q Sbjct: 899 LYLYDPNRSSSKIQALVRHLKALHSQSPNSKVIVFSQFSSYLDIIQSELKLASEEFIVFK 958 Query: 88 FPQGRTLDKDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F ++ ++ +N +GK+ +L + G GLNL + WW Sbjct: 959 FDGRLNMNDRTKLLESFNQPLEDGKVAILLLSLKAGGVGLNLTT-ASRAYMMDPWWSPSI 1017 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+RI + G V V I +N+I+ +L+ K I Sbjct: 1018 EDQAIDRI-----HRIGQNETVKVVRFIMENSIETKMLKIQERKKQI 1059 Score = 35.1 bits (79), Expect = 6.2, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 10/43 (23%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANG 38 K Y F+ Y + ++ Q+ Sbjct: 714 KLYQWFKDRAYASFAEGIKSGQLLRRYTQILTHILRLRQVCCH 756 >gi|195452364|ref|XP_002073321.1| GK14069 [Drosophila willistoni] gi|194169406|gb|EDW84307.1| GK14069 [Drosophila willistoni] Length = 808 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 65/181 (35%), Gaps = 22/181 (12%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA--- 87 K L+ N + ++ K++ + +IV + S L ++K Sbjct: 620 KLLRPNNPIFQFSNLSSKMKLISAKLQQVL----NETNDKVIVVSQWTSFLDVIKKHLDS 675 Query: 88 -------FPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 F + + E+N+ +L + G GLNL N L+ L Sbjct: 676 LSWETLAFNGKMSFKDRQLVLDEFNDTNNSKRVLLLSLTAGGVGLNL-NVANHLLLIDLH 734 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W+ + E+ R + G + ++Y + +TI++ + K + +++N Sbjct: 735 WNPQL-----EKQAQDRIYRYGQHKKTYIYRFMCVDTIEQRIQALQDYKLELAKMVINGG 789 Query: 199 K 199 + Sbjct: 790 R 790 >gi|134118954|ref|XP_771980.1| hypothetical protein CNBN1600 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254584|gb|EAL17333.1| hypothetical protein CNBN1600 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1060 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 15/101 (14%) Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I + + ++ + G GLNL N +V F W + Sbjct: 717 ERQEMIDRFQDLERDHFIMLISTRAGGVGLNLTA-ANKVVIFDPSW------------TM 763 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G KR V VY LI Q TI+EL+ +R K L Sbjct: 764 DRAFRIGQKRTVEVYRLIGQGTIEELIYERQVQKQQSARQL 804 >gi|308274464|emb|CBX31063.1| hypothetical protein N47_E45750 [uncultured Desulfobacterium sp.] Length = 413 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 18/190 (9%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF 77 ++ + C AN D++ E+I L ++ II+ + Sbjct: 94 SEMDLLRLQKALLICRMAANSTFLVDKQPPGYSSKLEEIDMLLENLKAEKDRKIILFSEW 153 Query: 78 NSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 + L ++ + + + + + + + GLNLQ Sbjct: 154 TTMLNLIEPVLEKHKLDYVRLDGSVPQKMRLSLINRFQKDPECKVFI-STNAGSTGLNLQ 212 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + ++ L W+ +Q I R + G KR V V+ ++ ++T++E +L+ L + Sbjct: 213 A-ADTVINVDLPWNPAVLEQRIGR-----AHRMGQKRPVQVFLMVTKDTLEESLLETLSS 266 Query: 187 KSTIQDLLLN 196 K + L+ Sbjct: 267 KHALFLAALD 276 >gi|320032945|gb|EFW14895.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira] Length = 1057 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 23/181 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEV--IIEKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 Y K + + +E +V + S L ++ A Sbjct: 872 YEGPHTKTKALISHLLGTVEESKHKPDQPPIKSVVFSSWTSHLDLIEIALQDNGIRGFTR 931 Query: 92 ----RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 L + + ++ + I +L A + G GLNL + + ++ Q Sbjct: 932 LDGTMALKQRNVALDKFRDDENITVLLATLGAGGVGLNLTS-ASRVYIMEPQYNPAAVAQ 990 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKETI 203 ++R+ + G R V I + +I+E + + + K + ++ LN + K+E + Sbjct: 991 AVDRV-----HRLGQTREVTTVQFIMKESIEEKIAELAKKKQKLANMSLNRGKSDKREMM 1045 Query: 204 H 204 Sbjct: 1046 E 1046 >gi|149029137|gb|EDL84422.1| similar to putative repair and recombination helicase RAD26L (predicted), isoform CRA_a [Rattus norvegicus] Length = 708 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 62/175 (35%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + + K K+ + A+ + Sbjct: 516 KMKVLDQLLNHFRKHRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 560 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N+++ F W+ Sbjct: 561 LDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNF-IGANVVILFDPTWNPAN--- 616 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + R + G R V V+ LI+ T++E++ R K + +++ + + Sbjct: 617 --DLQAIDRAYRIGQCRDVKVFRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 669 >gi|330966658|gb|EGH66918.1| SNF2-related:helicase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 652 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 67/208 (32%), Gaps = 36/208 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ L ++ + Sbjct: 457 QIERD---EYNQIMRSDQHRFARLGALRQL---------------LERVKVRILADLMAE 498 Query: 66 AN-AAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIPLLF 113 + +I+ + +A L++ + + + + Sbjct: 499 LDVDDKVILFCEYQESVATLREHCLKMGVGCVTLVGSDSPKKRQKAIDAFQQDPDCRVFI 558 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 559 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAE 612 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 +TID+ + Q L K + L++ +E Sbjct: 613 DTIDQQLWQMLMDKRALARDLIDPEAEE 640 >gi|213402009|ref|XP_002171777.1| DNA repair protein RAD16 [Schizosaccharomyces japonicus yFS275] gi|211999824|gb|EEB05484.1| DNA repair protein RAD16 [Schizosaccharomyces japonicus yFS275] Length = 895 Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 17/138 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW-NEGKIPLLFAHPAS 118 IV F + L + + G T TI+ + ++ I + + Sbjct: 744 KSIVFSQFAAMLDLVSWRLRKAGFNCVRLEGGMTPKARDATIKAFCSDVNITVFLVSLKA 803 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ Q ++RI + G R + + L +N+I+ Sbjct: 804 GGIALNLTE-ASQVFMLDPWWNASTQLQAMDRI-----HRIGQCRPIRITTLCIENSIES 857 Query: 179 LVLQRLRTKSTIQDLLLN 196 ++Q K + L+ Sbjct: 858 KIIQLQEKKEKLVKATLD 875 >gi|303322649|ref|XP_003071316.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240111018|gb|EER29171.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1057 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 23/181 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEV--IIEKANAAPIIVAYHFNSDLARLQKAFPQG------- 91 Y K + + +E +V + S L ++ A Sbjct: 872 YEGPHTKTKALISHLLGTVEESKHKPDQPPIKSVVFSSWTSHLDLIEIALQDNGIRGFTR 931 Query: 92 ----RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 L + + ++ + I +L A + G GLNL + + ++ Q Sbjct: 932 LDGTMALKQRNVALDKFRDDENITVLLATLGAGGVGLNLTS-ASRVYIMEPQYNPAAVAQ 990 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN---ALKKETI 203 ++R+ + G R V I + +I+E + + + K + ++ LN + K+E + Sbjct: 991 AVDRV-----HRLGQTREVTTVQFIMKESIEEKIAELAKKKQKLANMSLNRGKSDKREMM 1045 Query: 204 H 204 Sbjct: 1046 E 1046 >gi|238499905|ref|XP_002381187.1| DNA excision repair protein (Rad5), putative [Aspergillus flavus NRRL3357] gi|220692940|gb|EED49286.1| DNA excision repair protein (Rad5), putative [Aspergillus flavus NRRL3357] Length = 1246 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 6/89 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L + G GLNL + + WW IE + R + G R V Sbjct: 1140 SPSPRVLLISLRAGGVGLNLTA-ASNVFMMDPWWSFA-----IEAQAIDRVHRMGQLRDV 1193 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V + +++I+ +L+ K I L Sbjct: 1194 AVTRFVVKDSIEARMLRVQERKMNIAGSL 1222 Score = 35.9 bits (81), Expect = 3.8, Method: Composition-based stats. Identities = 3/46 (6%), Positives = 15/46 (32%), Gaps = 2/46 (4%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEK 46 Y + +R +++ + ++ ++ Q + + Sbjct: 827 IYTRAKRTFNDNIEAGTLLKSFTTIFAQILRLRQTCCHPILTRNKT 872 >gi|169779277|ref|XP_001824103.1| DNA repair protein RAD5 [Aspergillus oryzae RIB40] gi|83772842|dbj|BAE62970.1| unnamed protein product [Aspergillus oryzae] Length = 1246 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 6/89 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L + G GLNL + + WW IE + R + G R V Sbjct: 1140 SPSPRVLLISLRAGGVGLNLTA-ASNVFMMDPWWSFA-----IEAQAIDRVHRMGQLRDV 1193 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V + +++I+ +L+ K I L Sbjct: 1194 AVTRFVVKDSIEARMLRVQERKMNIAGSL 1222 Score = 35.9 bits (81), Expect = 3.8, Method: Composition-based stats. Identities = 3/46 (6%), Positives = 15/46 (32%), Gaps = 2/46 (4%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEK 46 Y + +R +++ + ++ ++ Q + + Sbjct: 827 IYTRAKRTFNDNIEAGTLLKSFTTIFAQILRLRQTCCHPILTRNKT 872 >gi|302135049|ref|ZP_07261039.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 650 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 74/211 (35%), Gaps = 23/211 (10%) Query: 8 QRELYCDLQGEN-IEAFNSASKTVK--CLQLANG--AVYYDEEKHWKEVHDEKIKALEVI 62 ++++ +L+G+ SK + Q+ + + + K++ + + Sbjct: 436 RKDVLPNLKGKQRQTVPVVLSKIERDEYNQIMRSDQHRFARLGGLRQLLERVKVRIVSDL 495 Query: 63 IEKAN-AAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ-EWNEGKIP 110 + + + +I+ + +A L++ + + K I + Sbjct: 496 MAELDVDDKVILFCEYQESVATLREHCLKMGIGCVTLVGSDSPKKRQKAIDAFQQDPDCR 555 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + ++ G G NL N + F L W R + G R V V Sbjct: 556 VFIGTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIP 609 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +A +TID+ + Q L K + L++ +E Sbjct: 610 LADDTIDQQLWQMLMDKRALASDLIDLEAEE 640 >gi|124512694|ref|XP_001349480.1| DNA repair protein rad54, putative [Plasmodium falciparum 3D7] gi|23499249|emb|CAD51329.1| DNA repair protein rad54, putative [Plasmodium falciparum 3D7] Length = 1239 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 51/138 (36%), Gaps = 21/138 (15%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 I+ K N + G + K I ++ + I + Sbjct: 642 YMEILCKENMYKFVR--------------LDGGINIKKRHKVINDFTHSADIFIFLLSSK 687 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G G+NL N L+ W+ ++ + R + G K+ ++Y L TID Sbjct: 688 SGGCGINL-ISSNRLILLDPDWNPAN-----DKQALARVWREGQKKICYIYRLFCTGTID 741 Query: 178 ELVLQRLRTKSTIQDLLL 195 E V QR +K + ++++ Sbjct: 742 EKVYQRQISKDGLSNMIV 759 >gi|229075933|ref|ZP_04208909.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock4-18] gi|229098700|ref|ZP_04229640.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-29] gi|229117725|ref|ZP_04247094.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock1-3] gi|228665702|gb|EEL21175.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock1-3] gi|228684779|gb|EEL38717.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock3-29] gi|228707248|gb|EEL59445.1| Uncharacterized ATP-dependent helicase yqhH [Bacillus cereus Rock4-18] Length = 560 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 63/158 (39%), Gaps = 17/158 (10%) Query: 52 HDEKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 + K +I++ + +I F F G K + Sbjct: 357 FNSKANKALELIKEIDDKVVIFTEYRASQMYLQWFLQQHGISSVPFRGGFKRGKKDWMKE 416 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + +L A + G G+NLQ+ + ++ + L W+ +Q I RI + G K Sbjct: 417 LFQK-HAQVLIAT-EAGGEGINLQF-CSHMINYDLPWNPMRLEQRIGRI-----HRLGQK 468 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V +Y L ++T++E +L+ L K + + ++ L + Sbjct: 469 NDVHIYNLATKHTVEEHILKLLYEKINLFERVIGELDE 506 >gi|227821158|ref|YP_002825128.1| superfamily II DNA/RNA helicase and SNF2 family-related protein [Sinorhizobium fredii NGR234] gi|227340157|gb|ACP24375.1| superfamily II DNA/RNA helicase and SNF2 family-related protein [Sinorhizobium fredii NGR234] Length = 1072 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 68/227 (29%), Gaps = 35/227 (15%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVII 63 + + + +++ + E ++ A I+ Sbjct: 746 REMSEPQMLRYDEARRKGGMMLALLHHIRRISLHPGLLEGETTEEFSASAARVDAAMDIL 805 Query: 64 EK--ANAAPIIVAYHFNSDLARL------------QKAFPQGRTLDKDPCTIQEW----- 104 + +V A T+D + Sbjct: 806 RHIKSKGERALVFVENRDVQAWFAEVVRLEFNLDTVMIINGDTTIDARKEITDRFQRHLT 865 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+G +L P + G GL L N ++ S WW+ +Q +R + G + Sbjct: 866 NDGGFDVLVLGPRAAGTGLTLTA-ANHVIHLSRWWNPAVEEQCNDR-----THRIGQTKP 919 Query: 165 VFVYYLIA------QNTIDELVLQRLRTKSTIQDLLL---NALKKET 202 V V+ +A + D L+ + ++ K TI D +L A + ET Sbjct: 920 VTVHIPLAVHTRLGAGSFDCLLQRLMKRKRTIADRVLWPAEATESET 966 >gi|317031845|ref|XP_001393539.2| DNA repair protein RAD5 [Aspergillus niger CBS 513.88] Length = 1212 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 6/88 (6%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL + + WW IE + R + G R V Sbjct: 1105 PPPTVLLISLRAGGVGLNLTA-ASNVFMMDPWWSFA-----IEAQAIDRVHRMGQTRDVQ 1158 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V + +++I+ +L+ K I L Sbjct: 1159 VTRFVVKDSIEGRMLRVQERKMNIAGSL 1186 >gi|119613041|gb|EAW92635.1| RAD26L hypothetical protein, isoform CRA_a [Homo sapiens] Length = 700 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 509 KMKVLQQLLNHCRKNRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 553 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N++V F W+ Sbjct: 554 LDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPAN--- 609 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 610 --DLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAK 662 >gi|325091158|gb|EGC44468.1| DNA repair protein RAD5 [Ajellomyces capsulatus H88] Length = 1196 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 48/161 (29%), Gaps = 9/161 (5%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 Q + + + + ++ + HF + + Sbjct: 1019 QFTSFLDLIGPQLTRAGIPYLRFDGTMAQKARSAVLAKFTSAHFPDEEDDEDGNNKRQSK 1078 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ +L + G GLNL N + WW Q I+R+ Sbjct: 1079 FPSSRSHVK---APPPNVLLISLRAGGVGLNLTA-ANQVFMMDPWWSFATEAQAIDRV-- 1132 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V I +++I+ +L+ K I L Sbjct: 1133 ---HRMGQLKDVSVTRFIVKDSIEGRILRIQERKMMIAGSL 1170 >gi|240275323|gb|EER38837.1| DNA repair protein rad5 [Ajellomyces capsulatus H143] Length = 1034 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 48/161 (29%), Gaps = 9/161 (5%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 Q + + + + ++ + HF + + Sbjct: 857 QFTSFLDLIGPQLTRAGIPYLRFDGTMAQKARSAVLAKFTSAHFPDEEDDEDGNNKRQSK 916 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ +L + G GLNL N + WW Q I+R+ Sbjct: 917 FPSSRSHVK---APPPNVLLISLRAGGVGLNLTA-ANQVFMMDPWWSFATEAQAIDRV-- 970 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V I +++I+ +L+ K I L Sbjct: 971 ---HRMGQLKDVSVTRFIVKDSIEGRILRIQERKMMIAGSL 1008 >gi|225684512|gb|EEH22796.1| DNA repair protein rad5 [Paracoccidioides brasiliensis Pb03] Length = 1247 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 6/89 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E +L + G GLNL N ++ WW Q I+R+ + G R V Sbjct: 1139 ESPPNVLLISLRAGGVGLNLTA-ANHVIMMDPWWSFATEAQAIDRV-----HRMGQLRDV 1192 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V I +++I+ +L+ K I L Sbjct: 1193 TVTRFIVKDSIEGRILKIQERKMMIAGSL 1221 >gi|225561718|gb|EEH09998.1| DNA repair protein rad5 [Ajellomyces capsulatus G186AR] Length = 1196 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 48/161 (29%), Gaps = 9/161 (5%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 Q + + + + ++ + HF + + Sbjct: 1019 QFTSFLDLIGPQLTRAGIPYLRFDGTMAQKARSAVLAKFTSAHFPDEEDDEDGNNKRQSK 1078 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ +L + G GLNL N + WW Q I+R+ Sbjct: 1079 FPSSRSHVK---APPPNVLLISLRAGGVGLNLTA-ANQVFMMDPWWSFATEAQAIDRV-- 1132 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V I +++I+ +L+ K I L Sbjct: 1133 ---HRMGQLKDVSVTRFIVKDSIEGRILRIQERKMMIAGSL 1170 >gi|238881849|gb|EEQ45487.1| DNA repair protein RAD5 [Candida albicans WO-1] Length = 1084 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 22/167 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ------------KA 87 +Y + ++ L+ + ++ + +IV F+S L +Q Sbjct: 899 LYLYDPNRSSSKIQALVRHLKALHSQSPNSKVIVFSQFSSYLDIIQSELKLASEEFIVFK 958 Query: 88 FPQGRTLDKDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F ++ ++ +N +GK+ +L + G GLNL + WW Sbjct: 959 FDGRLNMNDRTKLLESFNQPLEDGKVAILLLSLKAGGVGLNLTT-ASRAYMMDPWWSPSI 1017 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+RI + G V V I +N+I+ +L+ K I Sbjct: 1018 EDQAIDRI-----HRIGQNETVKVVRFIMENSIETKMLKIQERKKQI 1059 Score = 35.1 bits (79), Expect = 6.4, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 10/43 (23%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAF------NSASKTVKCLQLANG 38 K Y F+ Y + ++ Q+ Sbjct: 714 KLYQWFKDRAYASFAEGIKSGQLLRRYTQILTHILRLRQVCCH 756 >gi|212529790|ref|XP_002145052.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] gi|210074450|gb|EEA28537.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] Length = 852 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 21/166 (12%) Query: 49 KEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFP-----------QGRT 93 ++ K+ I K +A ++ F Sbjct: 660 HDMPSSKVLKTRDTIRKWFKDGSATKCVIFTQFRDMTKIFANMCTKEKWAFTRLTGDMTI 719 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D+D +I +L A + G GL++ N + WW+ Q Sbjct: 720 DDRDRSLKDFQALPEIKILIASLKAGGVGLDITA-ANKCILVEPWWNDAIQQ-----QAF 773 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G +R V + L+A+NTID+ +++ K + + + Sbjct: 774 CRLFRIGQERDVEIVKLVAKNTIDDYMMKLQEMKLKEIEGAIGDAR 819 >gi|170781504|ref|YP_001709836.1| putative helicase [Clavibacter michiganensis subsp. sepedonicus] gi|169156072|emb|CAQ01209.1| putative helicase [Clavibacter michiganensis subsp. sepedonicus] Length = 688 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 61/196 (31%), Gaps = 20/196 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQ----LANGAVYYDEEKHWKEVHDEKIKALEV 61 + + D N + + Q LA K V K + Sbjct: 482 RLVAQSELDEAKAQKTGENVFTMVRRIGQAKAVLAADYAAQLARSVGKVVFFAKHVDVMD 541 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 E A + + D + + N+ ++ ++ + G Sbjct: 542 QAEATFAKRELKSVSIRGDQS----------PAARQNAIDSFQNDPEVKVVVCSLTAAGV 591 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ N+++ W E E + R + G + V + +IA TID + Sbjct: 592 GLNLQAASNVVLAELSWTSAE------ETQAIDRVHRIGQEEPVTAWRIIAAQTIDAKLA 645 Query: 182 QRLRTKSTIQDLLLNA 197 + + K+ + L+ Sbjct: 646 ELIDGKAGLAARALDG 661 >gi|320326123|gb|EFW82179.1| SNF2-related:helicase [Pseudomonas syringae pv. glycinea str. B076] Length = 650 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 36/208 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ + ++ + Sbjct: 457 QVERD---EYNQIMRSDQHRFARLGALRQL---------------LERVKVRIVADLMAE 498 Query: 66 AN-AAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ-EWNEGKIPLLF 113 + +I+ + +A L++ + + K I + + Sbjct: 499 LDVDDKVILFCEYQESVATLREHCLKMGIGCVTLVGSDSPKKRQKAIDAFQQDQDCRVFI 558 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 559 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAE 612 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 +TID+ + Q L K + L++ +E Sbjct: 613 DTIDQQLWQMLMDKRALASDLIDPEAEE 640 >gi|156847675|ref|XP_001646721.1| hypothetical protein Kpol_1023p32 [Vanderwaltozyma polyspora DSM 70294] gi|156117401|gb|EDO18863.1| hypothetical protein Kpol_1023p32 [Vanderwaltozyma polyspora DSM 70294] Length = 1178 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 68/187 (36%), Gaps = 24/187 (12%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 N + + +K L+VI +++ I++ F+S L L++ + + + Sbjct: 990 NEPIELYCPTQKSAKIEALLKHLKVIQDQSAGEQIVIFSQFSSYLDILEQDLNEALSTKE 1049 Query: 97 --------------DPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 ++E+ + +L + G GLNL + WW Sbjct: 1050 TIIYKFDGRLSLKERSTVLKEFTTKDLTKQKILLLSLKAGGVGLNLT-CSSHAFMMDPWW 1108 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL-LNAL 198 Q I+RI + G V V I Q +I+E +L+ K TI + + ++ Sbjct: 1109 SPSMEDQAIDRI-----HRIGQSSNVKVVRFIVQGSIEEKMLKIQERKRTIGEAMDVDED 1163 Query: 199 KKETIHV 205 + + Sbjct: 1164 DRRKRRI 1170 >gi|66519055|ref|XP_393754.2| PREDICTED: transcription termination factor 2 [Apis mellifera] Length = 954 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 8/135 (5%) Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYG 128 I+A +S F + + + +N K +L G G Sbjct: 812 NIIASCLSSIKDASFDMFTGSVPIKERQGIMDSFNTSNNKPKILLLSLT-AGGVGLNLVG 870 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 GN L+ + W+ + Q +RI + G K+ VF+Y I ++TI+E + K Sbjct: 871 GNHLLLIDIHWNPQLEVQAQDRI-----YRFGQKKNVFIYKFICKDTIEERIKHLQERKM 925 Query: 189 TIQDLLLNALKKETI 203 I +L+ K T+ Sbjct: 926 EIAQNVLSGDKNSTV 940 >gi|297848822|ref|XP_002892292.1| hypothetical protein ARALYDRAFT_470549 [Arabidopsis lyrata subsp. lyrata] gi|297338134|gb|EFH68551.1| hypothetical protein ARALYDRAFT_470549 [Arabidopsis lyrata subsp. lyrata] Length = 1406 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 66/176 (37%), Gaps = 13/176 (7%) Query: 26 ASKTVKCL----QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 ++ K Q + + + + ++ + + I +V F + Sbjct: 1181 LAQLKKVRLDPNQSVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLV-SRFKWNP 1239 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + I E+N+ K + A +C G++L G + ++ + W Sbjct: 1240 GQEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISL-VGASRVILLDVVW 1298 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +ER ++R + G +R V+ Y+L+A+ T + + K I +L+ Sbjct: 1299 NPA-----VERQAISRAYRIGQQRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVF 1349 >gi|156550929|ref|XP_001603130.1| PREDICTED: hypothetical protein [Nasonia vitripennis] Length = 1160 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 19/169 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVI-IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---- 96 +E + + + L++I I + F +DL Q + +G + Sbjct: 868 CKKEGDKILLFSQCLNTLDLIEIFLKHIDSQSKQNGFTNDLFNFQDEWKRGLDYFRMDGS 927 Query: 97 -----DPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + +N L + G G+NL G N +V F W+ Q I Sbjct: 928 VNSEKRNSMCKTFNNPNNKRARLFLISTRAGGLGINL-IGANRVVIFDPSWNPSNDLQSI 986 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G + ++Y ++ T+++ + R TK ++ +L+ Sbjct: 987 FRI-----FRFGQSKPCYIYRFLSAGTMEQKIYNRQVTKLSLSLRVLDE 1030 >gi|326479937|gb|EGE03947.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97] Length = 1838 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 55/157 (35%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPC 99 + + + + II++ I++ + L+ + Sbjct: 1310 NSHRTQMVGQIIDESIKAGDKILIFSGYLHTLSYLGSMLGARGHKYCRLDGKTPIATRQA 1369 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++ + + + + GLN+ G N ++ F ++ E + R + Sbjct: 1370 ATRDFRDSDVHVYLISTKAGALGLNI-IGANRVIIFESEYNPT-----WEEQAIGRAYRL 1423 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VFVY + T +EL+ ++ K + ++ Sbjct: 1424 GQTKDVFVYRFVMGGTFEELIHEKGVFKKNMALRAID 1460 >gi|110740804|dbj|BAE98499.1| hypothetical protein [Arabidopsis thaliana] Length = 1410 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 13/176 (7%) Query: 26 ASKTVKCL----QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 ++ K Q + + + + ++ + + I +V F + Sbjct: 1185 LAQLKKVRLDPNQSVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLV-SRFKWNP 1243 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + I E+N+ K + A +C G++L G + ++ + W Sbjct: 1244 GEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISL-VGASRVILLDVVW 1302 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +ER ++R + G KR V+ Y+L+A+ T + + K I +L+ Sbjct: 1303 NPA-----VERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVF 1353 >gi|323455069|gb|EGB10938.1| hypothetical protein AURANDRAFT_21920 [Aureococcus anophagefferens] Length = 157 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 54/150 (36%), Gaps = 19/150 (12%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNE--- 106 ++ KA ++V L L + + + I +N Sbjct: 1 MLVKLKARGHRVLVFSQMTKMLDVLGEYCALRQFAYERLDGDTAARDRARRIDRFNAAAA 60 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + L + G G+NL N +V + W+ + + R + G V Sbjct: 61 DRAFLFLLSTRAGGLGVNL-ATANTVVIYDADWNP-----HNDLQALARAHRLGQTDRVL 114 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 VY L+ + T++E +L+ + K ++ +++ Sbjct: 115 VYRLVCRATVEERILEVAKRKLLLEHVVVE 144 >gi|296333385|ref|ZP_06875838.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675109|ref|YP_003866781.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296149583|gb|EFG90479.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413353|gb|ADM38472.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 557 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 20/197 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K + +++ + I + Q+ K + + K +V Sbjct: 328 KMLDQKEKQAPA-IDEHTIS-----VLIDRINQVT------QNSKALQVIDLIKKIDDKV 375 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A I F F G K + GK+ +L A + G Sbjct: 376 IIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFR-GKVQVLIAT-EAGGE 433 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ N ++ + L W+ +Q I RI + G +R V +Y + ++T++E +L Sbjct: 434 GINLQF-CNHMINYDLPWNPMRLEQRIGRI-----HRLGQERDVHIYNMATKHTVEEHIL 487 Query: 182 QRLRTKSTIQDLLLNAL 198 + L K + + ++ L Sbjct: 488 KLLYEKIHLFEKVVGEL 504 >gi|221118789|ref|XP_002158846.1| PREDICTED: similar to RAD54-like 2, partial [Hydra magnipapillata] Length = 743 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 11/139 (7%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN---EGKIPLL 112 I+ I N + Y + R + + I+ +N + Sbjct: 613 IEEFLQNIPIKNGSDHEKKYCWKK--GRDYFRLDGSTSTLEREKLIRLFNSKDNKHTNIF 670 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G+NL N +V F + W+ + V R + G ++ +Y L+A Sbjct: 671 LLSTRAGCLGINL-IAANRVVVFDVSWNP-----CHDAQAVCRVYRYGQEKPCHIYRLVA 724 Query: 173 QNTIDELVLQRLRTKSTIQ 191 NT+++ + R +K I Sbjct: 725 SNTMEKKIYYRQISKQGIS 743 >gi|257481637|ref|ZP_05635678.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 629 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 67/203 (33%), Gaps = 36/203 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ L ++ + Sbjct: 451 QVERD---EYNQIMRSDQHRFARLGALRQL---------------LERVKVRILADLMAE 492 Query: 66 AN-AAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQ-EWNEGKIPLLF 113 + +I+ + +A L++ + + K I + + Sbjct: 493 LDVDDKVILFCEYQESVATLREHCLKMGVGCVTLVGSDSPKKRQKAIDAFQQDPDCRVFI 552 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 553 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRVVVVKIPLAE 606 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +TID+ + Q L K + L++ Sbjct: 607 DTIDQQLWQMLMDKRALASDLID 629 >gi|226294171|gb|EEH49591.1| DNA repair protein rad5 [Paracoccidioides brasiliensis Pb18] Length = 1188 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 6/89 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E +L + G GLNL N ++ WW Q I+R+ + G R V Sbjct: 1080 ESPPNVLLISLRAGGVGLNLTA-ANHVIMMDPWWSFATEAQAIDRV-----HRMGQLRDV 1133 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V I +++I+ +L+ K I L Sbjct: 1134 TVTRFIVKDSIEGRILKIQERKMMIAGSL 1162 >gi|256075464|ref|XP_002574039.1| DNA repair and recombination protein rad54-related [Schistosoma mansoni] gi|238659232|emb|CAZ30272.1| DNA repair and recombination protein rad54-related [Schistosoma mansoni] Length = 776 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 93 TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + +Q N+ K +L + G GLNL G N L+ F + W+ + Sbjct: 504 TNKQRAEVVQRINDPKSHDRILLLSSRAGGVGLNL-IGANYLILFDMDWNPAN-----DA 557 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G R+V +Y L+ + ++E + QR K + L Sbjct: 558 QAMARIWRPGQSRSVNLYRLVTASGMEERIFQRQAAKLALTSQTL 602 >gi|260827933|ref|XP_002608918.1| hypothetical protein BRAFLDRAFT_85517 [Branchiostoma floridae] gi|229294272|gb|EEN64928.1| hypothetical protein BRAFLDRAFT_85517 [Branchiostoma floridae] Length = 460 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 8/109 (7%) Query: 91 GRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + ++++N +L + G GLNL GG+ L + W+ Sbjct: 339 GVPPRQRMEAVEQFNRNPKGPEVLLVSLQAGGVGLNL-IGGSHLFLLDMHWNPAL----- 392 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 E R + G K V ++ + ++T++E + K + +L+ Sbjct: 393 EDQASDRIYRVGQKNDVVIHKFVCKDTVEEKIKDLQNAKKNLAQGVLSG 441 Score = 35.1 bits (79), Expect = 5.9, Method: Composition-based stats. Identities = 5/45 (11%), Positives = 14/45 (31%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +N++ + + ++ Q E + +E I Sbjct: 190 QQNVKVSHILVQLLRLRQCCCHLSLMKEAVDQETFVNEGIDLTLE 234 >gi|298488366|ref|ZP_07006398.1| DNA helicase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157188|gb|EFH98276.1| DNA helicase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 650 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 68/208 (32%), Gaps = 36/208 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ + ++ + Sbjct: 457 QVERD---EYNQIMRSDTHRFARLGALRQL---------------LERVKVRIVADLMAE 498 Query: 66 AN-AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ-EWNEGKIPLLF 113 + +I+ + +A L++ + K I + + Sbjct: 499 LDVDDKVILFCEYQESVASLREHCLARGVGCVTLVGSDSPKKRQKAIDAFQQDQDCRVFI 558 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 559 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRLVVVKIPLAE 612 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 +TID+ + Q L K + L++ +E Sbjct: 613 DTIDQQLWQMLMDKRALASDLIDPEAEE 640 >gi|145335142|ref|NP_172040.2| chr31 (chromatin remodeling 31); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|332189724|gb|AEE27845.1| chromatin remodeling 31 [Arabidopsis thaliana] Length = 1410 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 13/176 (7%) Query: 26 ASKTVKCL----QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 ++ K Q + + + + ++ + + I +V F + Sbjct: 1185 LAQLKKVRLDPNQSVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLV-SRFKWNP 1243 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + I E+N+ K + A +C G++L G + ++ + W Sbjct: 1244 GEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISL-VGASRVILLDVVW 1302 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +ER ++R + G KR V+ Y+L+A+ T + + K I +L+ Sbjct: 1303 NPA-----VERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVF 1353 >gi|15320696|ref|NP_203208.1| GTA [Epiphyas postvittana NPV] gi|15213164|gb|AAK85603.1| GTA [Epiphyas postvittana NPV] Length = 501 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 74/213 (34%), Gaps = 32/213 (15%) Query: 10 ELYCDLQGENIEAFN-SASKTVKCLQLANGAVYYDEEKHWKE--------VHDEKIKALE 60 ++ + G+++ + S + Q+ ++ K + + Sbjct: 280 DVAVETDGKDLNSMQDVLSLLCRLRQMCCHPALTKCAHMFESHANIFEPTYASSKCQRVL 339 Query: 61 VIIEK---ANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWN-- 105 +I++ + I++ + L + + + +++ ++N Sbjct: 340 ELIQQVLNTDNDKIVLVSQWVEFLHIIAALLRRHEILILLYTGKQRVEERIAVENQFNAA 399 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L G GLNL GGN +V W+ + IE R + G K+ Sbjct: 400 NSPYRVLLMSIKCGGVGLNL-IGGNHIVVLEPHWNPQ-----IELQAQNRIHRLGQKKQT 453 Query: 166 FVYYLIA--QNTIDELVLQRLRTKSTIQDLLLN 196 +VY ++ N+++ + R K T + + + Sbjct: 454 YVYKMLHDEDNSVERYMKTRQDNKLTFVNKVFD 486 >gi|328773098|gb|EGF83135.1| hypothetical protein BATDEDRAFT_7470 [Batrachochytrium dendrobatidis JAM81] Length = 104 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 6/94 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + I ++ G GLNL ++ LWW+ +E + R + G + V Sbjct: 1 DPYISVMLVSLKCGGVGLNL-SIACRVIICDLWWNPA-----VEDQAIDRVHRIGQRVDV 54 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V YL+A++TI+E +L +K I L + Sbjct: 55 RVSYLVAKDTIEERILIMQESKRQIAAGALGEGE 88 >gi|312074223|ref|XP_003139874.1| hypothetical protein LOAG_04289 [Loa loa] gi|307764965|gb|EFO24199.1| hypothetical protein LOAG_04289 [Loa loa] Length = 879 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 23/220 (10%), Positives = 61/220 (27%), Gaps = 33/220 (15%) Query: 3 QYHKFQRELYCDLQ-------GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 Y + Y + + + ++ + + + + Sbjct: 257 IYRAILSKNYKYFENMNDKKTEHTGSKMSLLNVLMQLRKCVAHPYLFVGVEPEPFKEGDH 316 Query: 56 I---------KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + + + A +++ + L Q + Sbjct: 317 LFEVSGKFFLLDRLLSLLSAKGHRVLIFSQMSRVLDIAQDYLIYKGYNYRRLDGSVRAEE 376 Query: 98 --PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +I + G GLNL G+ ++F ++ + + R Sbjct: 377 RFVAVNRFQTNSEIFCFLLSTRAGGLGLNLTA-GDTVIFLDSDFNPQN-----DIQAAAR 430 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G + V V LIA+ T+++++ K + +L Sbjct: 431 CHRIGQMKPVKVIRLIARYTVEDMIHCHAARKLQMTHEIL 470 >gi|260584382|ref|ZP_05852129.1| SNF2 family DNA/RNA helicase [Granulicatella elegans ATCC 700633] gi|260157900|gb|EEW92969.1| SNF2 family DNA/RNA helicase [Granulicatella elegans ATCC 700633] Length = 790 Score = 72.1 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 29/187 (15%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPI 71 ++ EAF+ +K ++A + EKIK + I ++ N + Sbjct: 573 QIELYESEAFSEKCSVMKLRRMA-----------FLGEDSEKIKQIIDICKEARENGMKV 621 Query: 72 IVAYHFNSDLARLQKAFPQGR---------TLDKDPCTIQEWNEGKIP-LLFAHPASCGH 121 +V F +D+ + + + I E+++ +L A + G Sbjct: 622 LVFSFFKTDVLYRLRELVPNTASDILSGDISPARRQEVIDEFSKDSNQTVLLAQIEAGGV 681 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+Q NI++ W Q ++R + G R V VY L+ +++IDE ++ Sbjct: 682 GLNIQS-ANIVILCEPQWKPSTEQ-----QAISRVYRMGQTRDVLVYRLLTKDSIDEPIM 735 Query: 182 QRLRTKS 188 + K Sbjct: 736 ALIHKKE 742 >gi|91807128|ref|NP_075996.2| RAD26L hypothetical protein isoform 2 [Mus musculus] gi|172046593|sp|Q9JIM3|RAD26_MOUSE RecName: Full=Putative DNA repair and recombination protein RAD26-like Length = 699 Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 507 KMKVLQQLLNHFRKQRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 551 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N+++ F W+ Sbjct: 552 LDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPAN--- 607 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 608 --DLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 660 >gi|72387419|ref|XP_844134.1| SNF2 DNA repair protein [Trypanosoma brucei TREU927] gi|62360642|gb|AAX81053.1| SNF2 DNA repair protein, putative [Trypanosoma brucei] gi|70800666|gb|AAZ10575.1| SNF2 DNA repair protein, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 1497 Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 57/158 (36%), Gaps = 20/158 (12%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ ++ + +++ + S L L G + + Sbjct: 511 SPKLNLTLSLLRYISEDLREKVVLFSTYKSHLYLLMFLLRQRGVVSEVLHGGVEVKERQL 570 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ + + +L + G G+NL N + F + W+ + + R + Sbjct: 571 IIDRFSVDPSLRVLLCSTKALGVGINLVA-ANHCILFDVSWNPSD-----DTQATYRLYR 624 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G +R V +Y + + T + +V +KS I +++ Sbjct: 625 YGQRRPVTIYRIATEGTFEHVVFFYALSKSWIHKKIVD 662 >gi|261327295|emb|CBH10271.1| SNF2 DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 1497 Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 57/158 (36%), Gaps = 20/158 (12%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPC 99 K+ ++ + +++ + S L L G + + Sbjct: 511 SPKLNLTLSLLRYISEDLREKVVLFSTYKSHLYLLMFLLRQRGVVSEVLHGGVEVKERQL 570 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ + + +L + G G+NL N + F + W+ + + R + Sbjct: 571 IIDRFSVDPSLRVLLCSTKALGVGINLVA-ANHCILFDVSWNPSD-----DTQATYRLYR 624 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G +R V +Y + + T + +V +KS I +++ Sbjct: 625 YGQRRPVTIYRIATEGTFEHVVFFYALSKSWIHKKIVD 662 >gi|302144116|emb|CBI23221.3| unnamed protein product [Vitis vinifera] Length = 135 Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 50/141 (35%), Gaps = 15/141 (10%) Query: 62 IIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 ++E +A +V F S L ++ G ++ + +N+ +L Sbjct: 1 MVETDGSAKALVFSQFVSFLDLIDYSLQKSQINCVKLVGDVAARNALVSRFFNDSDCRIL 60 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G LNL + + ++ +E + G +AV + + Sbjct: 61 LTTSEAGGLSLNL-SVASYVFLMEPFFSSA-----VELQACDGVYRIGQHKAVRIVKFVT 114 Query: 173 QNTIDELVLQRLRTKSTIQDL 193 +NTI+E +L+ K+ Sbjct: 115 ENTIEERILELQAKKNQNSQR 135 >gi|16079514|ref|NP_390338.1| RNA polymerase-associated helicase protein [Bacillus subtilis subsp. subtilis str. 168] gi|221310381|ref|ZP_03592228.1| hypothetical protein Bsubs1_13471 [Bacillus subtilis subsp. subtilis str. 168] gi|221314705|ref|ZP_03596510.1| hypothetical protein BsubsN3_13392 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319628|ref|ZP_03600922.1| hypothetical protein BsubsJ_13313 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323904|ref|ZP_03605198.1| hypothetical protein BsubsS_13442 [Bacillus subtilis subsp. subtilis str. SMY] gi|1731040|sp|P54509|YQHH_BACSU RecName: Full=Uncharacterized ATP-dependent helicase yqhH gi|1303889|dbj|BAA12545.1| YqhH [Bacillus subtilis] gi|2634892|emb|CAB14389.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis subsp. subtilis str. 168] Length = 557 Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 19/199 (9%) Query: 3 QYHKFQRELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ D + + I+ + + Q+ K + V K Sbjct: 322 VYMTLKK--MLDQKEKQAPAIDEDTISVLIDRINQVT------QNSKALQVVDLIKKIDD 373 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +VII A I F F G K + GKI +L A + Sbjct: 374 KVIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFR-GKIQVLIAT-EAG 431 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NLQ+ N ++ + L W+ +Q I RI + G +R V +Y + ++T++E Sbjct: 432 GEGINLQF-CNHMINYDLPWNPMRLEQRIGRI-----HRLGQERDVHIYNMATKHTVEEH 485 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+ L K + + ++ L Sbjct: 486 ILKLLYEKIHLFEKVVGEL 504 >gi|70998502|ref|XP_753973.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293] gi|66851609|gb|EAL91935.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293] Length = 1827 Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 10/156 (6%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-DPCTIQEWNE-GK 108 + E IKA + ++ +++ P + +++ G+T + +N Sbjct: 1399 IISESIKAGDKVLVFSHSIPTLNYVEHVLKISKRSYRRLDGKTPISTRQAATKSFNTVSD 1458 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLN+ G N +V F ++ + E V R + G ++ VFVY Sbjct: 1459 EKVYLISTRAGGLGLNI-PGANRVVIFDFSFNP-----IWEEQAVGRAYRLGQQKPVFVY 1512 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 IA T +E++ + K+ + +++ KK I Sbjct: 1513 RFIAGGTFEEIIYNKAIFKTQLAVRVVD--KKNPIR 1546 >gi|229119309|ref|ZP_04248612.1| hypothetical protein bcere0017_55440 [Bacillus cereus Rock1-3] gi|228664175|gb|EEL19713.1| hypothetical protein bcere0017_55440 [Bacillus cereus Rock1-3] Length = 408 Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 18/200 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y +F++ ++ E + A+K + QLA ++ K++ ++ Sbjct: 227 KLYKEFKKHHIVEIGEELLLGDTPAAKKLYLRQLAGSY------------NENKLQYVKD 274 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 ++E N II A + T++ + + + + + + + Sbjct: 275 LVESTNDRIIIFYNFKKEYEALVDLIDKPISTVNGNLKDLTAYEKFENSVTLIQYQAGAM 334 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ I+ F + R + G +R F YYL+ +I+ +L Sbjct: 335 GLNLQKANKIVYFTLTDKS------ELFEQSKKRTHRIGQERPCFYYYLLTDGSIEWRML 388 Query: 182 QRLRTKSTIQDLLLNALKKE 201 L+ + D+L K+ Sbjct: 389 DVLKERKDYTDVLFEKEAKK 408 >gi|291484902|dbj|BAI85977.1| hypothetical protein BSNT_03666 [Bacillus subtilis subsp. natto BEST195] Length = 557 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 19/199 (9%) Query: 3 QYHKFQRELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ D + + I+ + + Q+ K + V K Sbjct: 322 VYMTLKK--MLDQKEKQAPAIDEDTISVLIDRINQVT------QNSKALQVVDLIKKIDD 373 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +VII A I F F G K + GKI +L A + Sbjct: 374 KVIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFR-GKIQVLIAT-EAG 431 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NLQ+ N ++ + L W+ +Q I RI + G +R V +Y + ++T++E Sbjct: 432 GEGINLQF-CNHMINYDLPWNPMRLEQRIGRI-----HRLGQERDVHIYNMATKHTVEEH 485 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+ L K + + ++ L Sbjct: 486 ILKLLYEKIHLFEKVVGEL 504 >gi|294955610|ref|XP_002788591.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] gi|239904132|gb|EER20387.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] Length = 236 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 22/181 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQ----------K 86 + + K+K + ++ + ++ + F S L + Sbjct: 48 IMGRIPSREVLESGKVKVVLDTVQSMLNEDATNKFLIFFQFTSLLEITKEEIERRGLGSC 107 Query: 87 AFPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + E +L + G G+NLQ N WW+ Sbjct: 108 GVSNASCGQQRSLLWDPFLVQEASFNILLISLRAAGEGINLQA-ANKAFVIDPWWNPAAE 166 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V R + G R V V + NTI+E + R K D + + + H Sbjct: 167 L-----QAVQRAHRLGQTRRVDVVKFVVTNTIEERIRTLQRKKQLAADTTVGGDENASYH 221 Query: 205 V 205 + Sbjct: 222 L 222 >gi|8163804|gb|AAF73858.1|AF217319_1 putative repair and recombination helicase RAD26L [Mus musculus] Length = 685 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 493 KMKVLQQLLNHFRKQRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 537 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N+++ F W+ Sbjct: 538 LDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPAN--- 593 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 594 --DLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 646 >gi|302896542|ref|XP_003047151.1| hypothetical protein NECHADRAFT_46398 [Nectria haematococca mpVI 77-13-4] gi|256728079|gb|EEU41438.1| hypothetical protein NECHADRAFT_46398 [Nectria haematococca mpVI 77-13-4] Length = 971 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 6/118 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 KD + N + + A G L+L N ++ LW+ Sbjct: 814 MGLNFLYYNRTANAKQKDKALREFRNNPEQTIFLASMKCGGQALDL-PVANRVIIVDLWY 872 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + +E+ R + G K+ + ++A+ +IDE + + K TI + L Sbjct: 873 N-----KTVEQQAFKRVHRIGQKKETHLVRILARGSIDERLYKLQNAKETIINRALQD 925 >gi|195172271|ref|XP_002026922.1| GL12824 [Drosophila persimilis] gi|194112690|gb|EDW34733.1| GL12824 [Drosophila persimilis] Length = 237 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 8/123 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVF 134 + S + ++++N I + + G GLNLQ + +V Sbjct: 7 YLSWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDIFVFLLSTRAGGLGLNLQT-ADTVVI 65 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F W+ + + R + G + V V L+ N+++E +L R K + + + Sbjct: 66 FDSDWNPHQ-----DLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKV 120 Query: 195 LNA 197 + A Sbjct: 121 IQA 123 >gi|12719426|ref|NP_075497.1| hypothetical protein phiSLTp35 [Staphylococcus phage phiSLT] gi|12697856|dbj|BAB21728.1| unnamed protein product [Staphylococcus phage phiSLT] Length = 116 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W LE +Q R Sbjct: 13 KAKERRWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLY 67 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 68 RQGQNHTTIIHHIMTDNTIDQKVYEALQNKELTQEELMKAIKARI 112 >gi|89099218|ref|ZP_01172096.1| DNA/RNA helicase (SNF2 family) protein [Bacillus sp. NRRL B-14911] gi|89086064|gb|EAR65187.1| DNA/RNA helicase (SNF2 family) protein [Bacillus sp. NRRL B-14911] Length = 562 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 8/144 (5%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 K +VII A + F F G K + + + +L A Sbjct: 369 KGIDDKVIIFTEYRATQLYLQWFLKQHGISSVPFRGGFKRGKKDWMRELFKN-NVQVLIA 427 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NLQ+ N ++ + L W+ +Q I RI + G ++ V +Y ++ Sbjct: 428 T-EAGGEGINLQF-CNHIINYDLPWNPMRLEQRIGRI-----HRLGQEKDVMIYNFAVKD 480 Query: 175 TIDELVLQRLRTKSTIQDLLLNAL 198 T++E +L+ L K + + ++ L Sbjct: 481 TVEEHILKLLYEKIHLFEKVIGEL 504 >gi|159126293|gb|EDP51409.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163] Length = 1827 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 10/156 (6%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-DPCTIQEWNE-GK 108 + E IKA + ++ +++ P + +++ G+T + +N Sbjct: 1399 IISESIKAGDKVLVFSHSIPTLNYVEHVLKISKRSYRRLDGKTPISTRQAATKSFNTVSD 1458 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLN+ G N +V F ++ + E V R + G ++ VFVY Sbjct: 1459 EKVYLISTRAGGLGLNI-PGANRVVIFDFSFNP-----IWEEQAVGRAYRLGQQKPVFVY 1512 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 IA T +E++ + K+ + +++ KK I Sbjct: 1513 RFIAGGTFEEIIYNKAIFKTQLAVRVVD--KKNPIR 1546 >gi|123506672|ref|XP_001329249.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] gi|121912202|gb|EAY17026.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] Length = 871 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 77/213 (36%), Gaps = 30/213 (14%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DEKIKA 58 + Q + + E ++ T + +N + + ++++ K++ Sbjct: 567 ELQNSIMAKGKKEGLDNNKQMYITKRL---SNSPILFFPRDVFEKIDPEYLFSRTPKLQL 623 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNE 106 L+VI++K ++ + S + L+ T + I+ + Sbjct: 624 LDVILQKLITTGHRFLIYSQWTSMMDLLEIYLNWRKIETSRIDGSVTTSERSRLIKSFVV 683 Query: 107 GKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 P+ + S GLNLQ + ++ F ++ IE R + G + Sbjct: 684 PGSPVKGMLLSTRSSAFGLNLQA-ADTVILFDSDYNP-----FIELQASARVHRMGQTNS 737 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V + L+ +T +E +L+ R K + ++ A Sbjct: 738 VVIVRLMTNDTGEEHILRIARRKFKMGQQIITA 770 >gi|8778726|gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana] Length = 1465 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 13/176 (7%) Query: 26 ASKTVKCL----QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 ++ K Q + + + + ++ + + I +V F + Sbjct: 1240 LAQLKKVRLDPNQSVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLV-SRFKWNP 1298 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + I E+N+ K + A +C G++L G + ++ + W Sbjct: 1299 GEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISL-VGASRVILLDVVW 1357 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + +ER ++R + G KR V+ Y+L+A+ T + + K I +L+ Sbjct: 1358 NPA-----VERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVF 1408 >gi|258565611|ref|XP_002583550.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237907251|gb|EEP81652.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 1056 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 54/150 (36%), Gaps = 18/150 (12%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEG-KIPL 111 +V + S L ++ A +L + + + + I + Sbjct: 896 PDQPPIKSVVFSAWTSHLDLIEIALQDSGITGFTRLDGTMSLKQRNAALDAFRDDDNITV 955 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L A + G GLNL + + ++ Q I+R+ + G R V I Sbjct: 956 LLATLGAGGVGLNLTS-ASRVYVMEPQYNPAAVAQAIDRV-----HRLGQTREVTTVQFI 1009 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + +I+E + + + K + ++ LN K + Sbjct: 1010 MKESIEEKIAELAKKKQQLANMSLNRGKSD 1039 >gi|121712770|ref|XP_001273996.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] gi|119402149|gb|EAW12570.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] Length = 1818 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 47/116 (40%), Gaps = 7/116 (6%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 R + + + +N G + + + G GLN+ G N +V F + Sbjct: 1437 NRSYCRLDGKTPIFSRQASTKRFNTGSEEQVYLISTRAGGLGLNI-PGANRVVIFDFSFS 1495 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + E V R + G ++ V+VY I+ T +E++ + K+ + +++ Sbjct: 1496 P-----VWEEQAVGRAYRLGQQKPVYVYRFISGGTFEEIMYNKAVFKTQLAFRVVD 1546 >gi|321311942|ref|YP_004204229.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis BSn5] gi|320018216|gb|ADV93202.1| putative RNA polymerase-associated helicase protein [Bacillus subtilis BSn5] Length = 557 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 19/199 (9%) Query: 3 QYHKFQRELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ D + + I+ + + Q+ K + V K Sbjct: 322 VYMTLKK--MLDQKEKQAPAIDEDTISVLIDRINQVT------QNSKALQVVDLIKKIDD 373 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +VII A I F F G K + GKI +L A + Sbjct: 374 KVIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFR-GKIQVLIAT-EAG 431 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NLQ+ N ++ + L W+ +Q I RI + G +R V +Y + ++T++E Sbjct: 432 GEGINLQF-CNHMINYDLPWNPMRLEQRIGRI-----HRLGQERDVHIYNMATKHTVEEH 485 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+ L K + + ++ L Sbjct: 486 ILKLLYEKIHLFEKVVGEL 504 >gi|154286186|ref|XP_001543888.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150407529|gb|EDN03070.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 219 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + +I+E+ + +I +L + G GL+L N +F LWW+ + IE+ Sbjct: 1 MPIRQREKSIEEFSKDPEIRILVCSLRTAGTGLDLTA-ANKCIFVDLWWN-----EAIEQ 54 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + KR V ++ +N+ID+ + KS D +L + Sbjct: 55 QAFFRLFRINQKRKVEFVRVVVRNSIDDRLQLLQEDKSNNIDGVLGS 101 >gi|19072776|gb|AAL84633.1|AF474993_1 putative transcription regulator WdMOT1 [Exophiala dermatitidis] Length = 1703 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 25/220 (11%), Positives = 56/220 (25%), Gaps = 68/220 (30%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----------------HDEKIKALE 60 + + +L N +E + H K+ AL Sbjct: 1446 DKEAKQHIFQALQYMRKLCNSPALVVKEGTKQYETISKQLAASKSSLRDVAHAPKLTALR 1505 Query: 61 VIIEKA-----------------NAAPIIVAYHFNSDLARLQK-------------AFPQ 90 ++ + ++ L +Q Sbjct: 1506 DLLVDCGIGVSNDSNEMSASNYVSQHRALIFCQMKEMLDMVQNEVLAKLLPSVQFLRLDG 1565 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 K + ++N + ++F W+ ++ + Sbjct: 1566 SVEATKRQNIVNQFNNDPSY----------------DCADTVIFVEHDWNPQK-----DI 1604 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G K+ V VY LI + T++E ++ R K + Sbjct: 1605 QAMDRAHRIGXKKVVNVYRLITRGTLEEKIMXLQRFKIDV 1644 >gi|325115673|emb|CBZ51228.1| putative SNF2 family N-terminal domain-containing protein [Neospora caninum Liverpool] Length = 1837 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 3/91 (3%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + G+GL L + ++ VF + IER + R + G + Sbjct: 575 EADCAAVFLVSVRAGGYGLTLSHCASVCVFLEGG---GDGNPQIERQAIARLYRQGQTKK 631 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V V LI ++T++E++ R R K + +L Sbjct: 632 VKVIRLITKSTVEEVMYWRGRQKLKLASDVL 662 >gi|289625868|ref|ZP_06458822.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 652 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 36/203 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ + ++ + Sbjct: 457 QVERD---EYNQIMRSDTHRFARLGALRQL---------------LERVKVRIVADLMAE 498 Query: 66 AN-AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ-EWNEGKIPLLF 113 + +I+ + +A L++ + K I + + Sbjct: 499 LDVDDKVILFCEYQESVASLREHCLAMGVGCVTLVGSDSPKKRQKAIDAFQQDQDCRVFI 558 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 559 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAE 612 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +TID+ + Q L K + L++ Sbjct: 613 DTIDQQLWQMLMDKRALASDLID 635 >gi|218189914|gb|EEC72341.1| hypothetical protein OsI_05562 [Oryza sativa Indica Group] Length = 2184 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 73/231 (31%), Gaps = 60/231 (25%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 K ++ ++ N + ++ K+ L+ I+ K + +++ Sbjct: 1262 KCMELRKVCNHPLLSYPFMNYYGKDFIIRSCGKLWNLDRILIKLHRSGHRVLLFSTMTKL 1321 Query: 81 LARLQKAFPQGRTLDKD----------PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYG 128 L L++ + + + I ++N + + G GLNLQ Sbjct: 1322 LDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNRPNSDCFIFLLSIRAAGRGLNLQS- 1380 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ--------------- 173 + +V + + + E V R + G R V V Y+ A Sbjct: 1381 ADTVVIYDPDPNPQN-----EEQAVARAHRIGQTRDVKVIYMEAVVDNISSYQKEDELRN 1435 Query: 174 -----------------NTIDELVL-QRLRTKSTIQDLLLNALK--KETIH 204 +I+ L+ + K + D ++NA + + T H Sbjct: 1436 GGSGDLEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTH 1486 >gi|237721132|ref|ZP_04551613.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229449967|gb|EEO55758.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 578 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 72/216 (33%), Gaps = 24/216 (11%) Query: 2 KQYHKFQRELYCDL-------QGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH 52 K+Y + ++ L + ++ N + Q++ + + VH Sbjct: 366 KEYKAAEADMVKYLKKYKNASDEQVQKSMNGAVMVQMQLLKQIS---ARGKIKAVCEFVH 422 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 D ++I+ V + + K N L+ Sbjct: 423 DVIDGGEKLILF---GYLKEVVAELKKEFPKAVTVTGSDSVNQKQYAVDSFQNNPDCKLI 479 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + S G GL L + + F W + + R + G K V YY + Sbjct: 480 ILNFKSGGTGLTLTA-ASRVAFIEFPWTFSDCE-----QAEDRAHRNGQKNNVNCYYFLG 533 Query: 173 QNTIDELVLQRLRTKSTIQDLLL---NALKKETIHV 205 ++TID+ + ++TK I + + + +++ +++ Sbjct: 534 KDTIDKYMYDVIQTKKNIANGVTGTDDQVEENMVNL 569 >gi|40882196|emb|CAF06022.1| related to regulator of chromatin [Neurospora crassa] Length = 451 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 7/120 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 D ++ + I+ + + + +L + GLNL + + Sbjct: 317 KQDAGVAALLVHGKTSISERTRLIRTFQGDPQAFILIMSVGTGAVGLNLTA-ASHVHVVE 375 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ +E + R + G + V V I + T+++ ++ K T+ L + Sbjct: 376 PHWNPS-----VEAQAIARAVRMGQTKNVLVTRYIMKRTVEDNIVALQTKKQTLAKLTFD 430 >gi|330894793|gb|EGH27454.1| SNF2-related:helicase [Pseudomonas syringae pv. mori str. 301020] Length = 650 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 73/211 (34%), Gaps = 23/211 (10%) Query: 8 QRELYCDLQGEN-IEAFNSASKTVK--CLQLANG--AVYYDEEKHWKEVHDEKIKALEVI 62 ++++ +L+G+ S+ + Q+ + + + K++ L + Sbjct: 436 RKDVLPNLKGKQRQTVPVILSQVERDEYNQIMRSDQHRFARLGAMRQLLERVKVRILADL 495 Query: 63 IEKAN-AAPIIVAYHFNSDLARLQKAFPQGR-----------TLDKDPCTIQEWNEGKIP 110 + + + +I+ + +A L++ + + + Sbjct: 496 MAELDVDDKVILFCEYQESVATLREHCLKMDVGCVTLVGSDSPKKRQKAIDAFQQDPDCR 555 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + ++ G G NL N + F L W R + G R V V Sbjct: 556 VFIGTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIP 609 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +A++TID+ + Q L K + L++ +E Sbjct: 610 LAEDTIDQQLWQMLMDKRALASDLIDPEAEE 640 >gi|293372914|ref|ZP_06619283.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|298480929|ref|ZP_06999124.1| SNF2 family domain-containing protein [Bacteroides sp. D22] gi|292631982|gb|EFF50591.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|298272952|gb|EFI14518.1| SNF2 family domain-containing protein [Bacteroides sp. D22] Length = 578 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 72/216 (33%), Gaps = 24/216 (11%) Query: 2 KQYHKFQRELYCDL-------QGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVH 52 K+Y + ++ L + ++ N + Q++ + + VH Sbjct: 366 KEYKAAEADMVKYLKKYKNASDEQVQKSMNGAVMVQMQLLKQIS---ARGKIKAVCEFVH 422 Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 D ++I+ V + + K N L+ Sbjct: 423 DVIDGGEKLILF---GYLKEVVAELKKEFPKAVTVTGSDSVNQKQYAVDSFQNNPDCKLI 479 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + S G GL L + + F W + + R + G K V YY + Sbjct: 480 ILNFKSGGTGLTLTA-ASRVAFIEFPWTFSDCE-----QAEDRAHRNGQKNNVNCYYFLG 533 Query: 173 QNTIDELVLQRLRTKSTIQDLLL---NALKKETIHV 205 ++TID+ + ++TK I + + + +++ +++ Sbjct: 534 KDTIDKYMYDVIQTKKNIANGVTGTDDQVEENMVNL 569 >gi|32473602|ref|NP_866596.1| SNF2 family helicase [Rhodopirellula baltica SH 1] gi|32398282|emb|CAD78377.1| helicase, Snf2 family [Rhodopirellula baltica SH 1] Length = 914 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 31/202 (15%) Query: 19 NIEAFNSASKTVKCLQ---------LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 I A ++ + + D+E E++ L + Sbjct: 591 QIAAKKFMTEMDRLRMQKCLLMARMACDSTYLLDQEADEYSSKLERLGELLEGLIADPTR 650 Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI-QEWNEGKIPLLFAHPAS 118 I++ + L R++ Q K + + N+ + ++ + Sbjct: 651 KIVLFSEWRRMLTRVENRLDQIGCDYVRLDGQVPQKKRAAIVSRFQNDPECRVINMT-NA 709 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN---- 174 GLNLQ N ++ L W+ +Q I R + G + V VY L+ + Sbjct: 710 GSTGLNLQA-ANTVINVDLPWNPAVLEQRIAR-----AYRMGQENPVHVYKLVTTSEPTP 763 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 TI+E +L L +K + D LN Sbjct: 764 TIEEGLLTTLASKQDLADASLN 785 >gi|154686721|ref|YP_001421882.1| YqhH [Bacillus amyloliquefaciens FZB42] gi|154352572|gb|ABS74651.1| YqhH [Bacillus amyloliquefaciens FZB42] Length = 556 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 77/199 (38%), Gaps = 19/199 (9%) Query: 3 QYHKFQRELYCDLQGENIEA---FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 Y ++ D + + A A+ + Q+ K + V + Sbjct: 321 VYMTLKK--MLDQKDKQAPAFDDQTIANLMDRINQVT------QNSKAIQVVDLIQKIND 372 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +VII A I F F G K + GK+ +L A + Sbjct: 373 KVIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFR-GKVQVLIAT-EAG 430 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NLQ+ N ++ + L W+ +Q I RI + G +R V +Y + ++T++E Sbjct: 431 GEGINLQF-CNHIINYDLPWNPMRLEQRIGRI-----HRLGQERDVHIYNMATKHTVEEH 484 Query: 180 VLQRLRTKSTIQDLLLNAL 198 +L+ L K + + ++ L Sbjct: 485 ILKLLYDKIHLFENVVGEL 503 >gi|330885778|gb|EGH19927.1| SNF2-related:helicase [Pseudomonas syringae pv. glycinea str. race 4] Length = 652 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 36/203 (17%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ + ++ + Sbjct: 457 QVERD---EYNQIMRSDTHRFARLGALRQL---------------LERVKVRIVADLMAE 498 Query: 66 AN-AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ-EWNEGKIPLLF 113 + +I+ + +A L++ + K I + + Sbjct: 499 LDVDDKVILFCEYQESVASLREHCLAMGVGCVTLVGSDSPKKRQKAIDAFQQDQDCRVFI 558 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 559 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAE 612 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 +TID+ + Q L K + L++ Sbjct: 613 DTIDQQLWQMLMDKRALASDLID 635 >gi|145546039|ref|XP_001458703.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124426524|emb|CAK91306.1| unnamed protein product [Paramecium tetraurelia] Length = 1228 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 6/134 (4%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 ++ F + Q ++ L + GLNL Sbjct: 1083 DMIRLLEEKFQEEEIWCQVVTGAMSVEQRNKVIQSFEQHPAFTALILSLRATSTGLNLT- 1141 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 N + WW+ IE + R + G K+ V V + NTI+E + + K Sbjct: 1142 MANHVFLVDPWWNPA-----IEDQAIGRADRIGQKKQVNVIRFLCANTIEEKINLLHQKK 1196 Query: 188 STIQDLLLNALKKE 201 + ++ +K+ Sbjct: 1197 KKMIRKVIANDQKK 1210 >gi|315042015|ref|XP_003170384.1| DNA repair protein rad5 [Arthroderma gypseum CBS 118893] gi|311345418|gb|EFR04621.1| DNA repair protein rad5 [Arthroderma gypseum CBS 118893] Length = 1181 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL N + WW +E + R + G R V V Sbjct: 1078 VLLISLRAGGVGLNLT-VANHVFMMDPWWSFA-----VEAQAIDRVHRMGQLRDVKVVRF 1131 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 + +N+I+ +L+ K I L Sbjct: 1132 VVKNSIEGRILKIQERKMMIAGSL 1155 >gi|311743689|ref|ZP_07717495.1| possible DNA helicase [Aeromicrobium marinum DSM 15272] gi|311312819|gb|EFQ82730.1| possible DNA helicase [Aeromicrobium marinum DSM 15272] Length = 594 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 77/225 (34%), Gaps = 31/225 (13%) Query: 2 KQYHKFQRELYCDLQGE-NIEAFNSASKTVKCLQLAN---------GAVYYDEEKHWKE- 50 K Y F+ E+ +L ++ + SK +LA+ G K Sbjct: 359 KVYDDFEAEMLAELPDGTELQVMDVMSKFGHLSRLASAAADVEVTYGPDVDQVTGLEKRH 418 Query: 51 ------VHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTL 94 K+ AL ++++ P++V + G+T+ Sbjct: 419 VSLTLKDPSWKVDALLEVLDERPGQPVVVFAPSRQLVTLAGEAAAKAGLRVGYIVGGQTM 478 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + T+ + G++ ++ + G GL L +VF W L E Q +R Sbjct: 479 TERTATVTAFQGGELDVVCVTTGAGGVGLTLTA-AKTVVFLQRPWSLVESIQAEDRCHRI 537 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + ++A+NTID V LR ++ L+ + Sbjct: 538 GS---EQHDCIEIVDIVARNTIDTRVRAVLRERAGQLADLVQDPR 579 >gi|320590298|gb|EFX02741.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 1240 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 49/148 (33%), Gaps = 17/148 (11%) Query: 63 IEKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 + +V + S L + + + ++ + + Sbjct: 1080 MPDEQPIKSVVFSGWTSHLDLIERALRDNGIAFCRLDGKMSRTARTQAMDTFRDDPSVHV 1139 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G GLNL GN + ++ Q I+R+ + G KR V I Sbjct: 1140 ILVSIMAGGLGLNLTA-GNYVYVMEPQYNPAAEAQAIDRV-----HRLGQKRPVHTVRFI 1193 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +E +L+ K + +L LN + Sbjct: 1194 MNRSFEERMLEIQADKIKLANLSLNRDR 1221 >gi|242021061|ref|XP_002430965.1| hypothetical protein Phum_PHUM506220 [Pediculus humanus corporis] gi|212516185|gb|EEB18227.1| hypothetical protein Phum_PHUM506220 [Pediculus humanus corporis] Length = 687 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ L + G G+NL G N + F + W+ Q I RI + G + V Sbjct: 483 RLRLFLISTKAGGIGINLT-GANRAILFDVSWNPSHDTQSIFRI-----YRIGQNKPCHV 536 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Y +A T++E + +R K +I +++ L Sbjct: 537 YRFVASGTMEEKIYERQIMKQSISYRVVDEL 567 >gi|322505242|emb|CAM39730.2| DNA repair protein-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1288 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 21/154 (13%) Query: 53 DEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTI 101 K + L I ++V F + L Q + T+ + + Sbjct: 1084 SSKTQYLIDKIRSLPADDKVVVFSTFLTYLRCAQHWLQAAGVSSAVYTGSMTMKQKHSLL 1143 Query: 102 QEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++ +L A +SCG GLNL N W+ E + R Sbjct: 1144 ELFHDATQPASPRVLLATTSSCGVGLNLT-CANHCFLMEPSWNPGT-----EEQALNRIH 1197 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G + V + LIA TI++ + Q K + Sbjct: 1198 RIGQTKPVTITKLIADGTIEQNISQLCERKRALS 1231 >gi|154340547|ref|XP_001566230.1| DNA repair protein-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1288 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 21/154 (13%) Query: 53 DEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTI 101 K + L I ++V F + L Q + T+ + + Sbjct: 1084 SSKTQYLIDKIRSLPADDKVVVFSTFLTYLRCAQHWLQAAGVSSAVYTGSMTMKQKHSLL 1143 Query: 102 QEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +++ +L A +SCG GLNL N W+ E + R Sbjct: 1144 ELFHDATQPASPRVLLATTSSCGVGLNLT-CANHCFLMEPSWNPGT-----EEQALNRIH 1197 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G + V + LIA TI++ + Q K + Sbjct: 1198 RIGQTKPVTITKLIADGTIEQNISQLCERKRALS 1231 >gi|145551825|ref|XP_001461589.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124429424|emb|CAK94216.1| unnamed protein product [Paramecium tetraurelia] Length = 1225 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 44/133 (33%), Gaps = 6/133 (4%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 ++ F + Q ++ I L + GLNL Sbjct: 1081 MIRLLEEKFQEEQIWCQVVTGAMSVEQRNKVIQSFEQHPSITALILSLRATSTGLNLT-M 1139 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N + WW+ IE + R + G K+ V V + NTI+E + + K Sbjct: 1140 ANHVFLVDPWWNPA-----IEDQAIGRADRIGQKKQVNVIRFLCANTIEEKINLLHQKKK 1194 Query: 189 TIQDLLLNALKKE 201 + ++ +K+ Sbjct: 1195 KMIRKVIANEQKK 1207 >gi|57651290|ref|YP_185255.1| hypothetical protein SACOL0363 [Staphylococcus aureus subsp. aureus COL] gi|57285476|gb|AAW37570.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus COL] Length = 116 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + WN G I LL AHPAS GHGLNLQ GG+I+V+F L W LE +Q R Sbjct: 13 KAKERRWNSGDIKLLIAHPASAGHGLNLQQGGHIIVWFGLTWSLELYQ-----QANARLY 67 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G +++++ NTID+ V + L+ K Q+ L+ A+K Sbjct: 68 RQGQNHTTIIHHIMTDNTIDQRVYKALQNKELTQEELMKAIKARI 112 >gi|327538790|gb|EGF25438.1| SNF2 family helicase [Rhodopirellula baltica WH47] Length = 914 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 31/202 (15%) Query: 19 NIEAFNSASKTVKCLQ---------LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 I A ++ + + D+E E++ L + Sbjct: 591 QIAAKKFMTEMDRLRMQKCLLMARMACDSTYLLDQEADEYSSKLERLGELLEGLIADPTR 650 Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI-QEWNEGKIPLLFAHPAS 118 I++ + L R++ Q K + + N+ + ++ + Sbjct: 651 KIVLFSEWRRMLTRIENRLDQIGCDYVRLDGQVPQKKRAAIVSRFQNDPECRVINMT-NA 709 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN---- 174 GLNLQ N ++ L W+ +Q I R + G + V VY L+ + Sbjct: 710 GSTGLNLQA-ANTVINVDLPWNPAVLEQRIAR-----AYRMGQENPVHVYKLVTTSEPTP 763 Query: 175 TIDELVLQRLRTKSTIQDLLLN 196 TI+E +L L +K + D LN Sbjct: 764 TIEEGLLTTLASKQDLADASLN 785 >gi|308489133|ref|XP_003106760.1| CRE-CSB-1 protein [Caenorhabditis remanei] gi|308253414|gb|EFO97366.1| CRE-CSB-1 protein [Caenorhabditis remanei] Length = 918 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 59/205 (28%), Gaps = 42/205 (20%) Query: 35 LANGAVYYDE-----EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 + N Y K + H K+ + ++ P F + Sbjct: 440 ICNHPGLYRGAIPGSSKFGEIKHSGKVAMTFKLFDEWFKDPKNRVIFFTQRRKVVSMMEY 499 Query: 90 Q----------------------------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 T P I+++ + I + + G Sbjct: 500 FLDQNRYELVTYFRRMKKNSRIRHASLTGSTTAAARPKIIKKFEEDTDIKVFLMTTRAGG 559 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL N ++ F W+ + + R + G + V + LI+ T+++ Sbjct: 560 LGLNLT-CANKVIIFDPDWNPQA-----DNQAKNRIYRMGQENDVSIVRLISNGTLEDRK 613 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 + K + LL+ + HV Sbjct: 614 FFKQVQKEMLAAQLLH--NADVEHV 636 >gi|50954487|ref|YP_061775.1| ATP-dependent RNA helicase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950969|gb|AAT88670.1| ATP-dependent RNA helicase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 721 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 61/202 (30%), Gaps = 22/202 (10%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQ----LANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + N + K Q L++ K V K + Sbjct: 517 RLVAQSELEESKSAKTGDNVFTMVRKIGQAKAGLSSDYTAQLARSVGKVVFFAKHIDVMD 576 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 E A AA + D I +N + + + + G Sbjct: 577 AAEAAFAARDLTTVSIRGDQRAAV-----------RQKEIDAFNTDPGVSVAVCSLTAAG 625 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ N+++ W E+ + R + G + V + +IA TID + Sbjct: 626 VGLNLQAASNVVLAELSWTAAEQT------QAIDRVHRIGQEEPVTAWRIIAAQTIDSKI 679 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + + K + L+ E Sbjct: 680 AELIDAKQGLAARALDGSDVEM 701 >gi|212638494|ref|YP_002315014.1| Superfamily II DNA/RNA helicase, SNF2 family [Anoxybacillus flavithermus WK1] gi|212559974|gb|ACJ33029.1| Superfamily II DNA/RNA helicase, SNF2 family [Anoxybacillus flavithermus WK1] Length = 349 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 75/200 (37%), Gaps = 27/200 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y Q++ + + I AN +K+ Sbjct: 165 REYKIIQKDRVLETKDGKIAFDTIMKLQHGLRYYAN--------------QKDKLSYT-E 209 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI------QEWNEGKIPLLFAH 115 ++ + I++ Y++ + L + +T+ + + ++W+ K + Sbjct: 210 MLAEGTEENIVIFYYYQQEKEDLMNLLGKSKTIYEVSGKVNKLPDREKWSNLKNTVTLVQ 269 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+ LQY NI++F++ + +++ + R + G + V VY I +N+ Sbjct: 270 YQAGAAGIELQY-ANIVIFYTPTYSYQDYD-----QALGRCYRNGQTKKVTVYRYITKNS 323 Query: 176 IDELVLQRLRTKSTIQDLLL 195 I+E V + L K + L Sbjct: 324 IEEAVYEALAAKKDFTEELF 343 >gi|224004070|ref|XP_002295686.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209585718|gb|ACI64403.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 338 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 62/209 (29%), Gaps = 39/209 (18%) Query: 2 KQYHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------- 51 + Y + L + ++ + + ++ + N + + Sbjct: 134 QYYRALYEKNLKFLHRGKKPLDGPSINNLAMQLRKCCNHPFLLTGVESEVRLQQPNKEIV 193 Query: 52 -----HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKA----------FPQGRTL 94 K+ L+ ++ KA+ I++ F L ++ T Sbjct: 194 DLMVEASGKLVLLDKLLPRLKADGHRILLFSQFKIMLDLIEDYLILRGFKSERIDGSITG 253 Query: 95 DKDPCTIQEWNEG------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K I + ++ + G G+NL + + F W+ + Sbjct: 254 LKRQAAIDRYQSKGDNGRENPFIMLLSTRAGGVGINLTA-ADTCIIFDSDWNPQN----- 307 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + R + G + V +Y L+ + T + Sbjct: 308 DLQAQARCHRIGQTKNVKIYRLLTRKTYE 336 >gi|328554198|gb|AEB24690.1| RNA polymerase-associated helicase protein [Bacillus amyloliquefaciens TA208] gi|328912591|gb|AEB64187.1| putative RNA polymerase-associated helicase protein [Bacillus amyloliquefaciens LL3] Length = 556 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 77/201 (38%), Gaps = 23/201 (11%) Query: 3 QYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y ++ L + +A A+ + Q+ K + V + Sbjct: 321 VYMTLKK----MLDQKEQKAPAFDEQTIANLMDRINQVT------QNSKAIQVVDLIQKI 370 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +VII A I F F G K + GK+ +L A Sbjct: 371 NDKVIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFR-GKVQVLIAT-E 428 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NLQ+ N ++ + L W+ +Q I RI + G +R V +Y + ++T++ Sbjct: 429 AGGEGINLQF-CNHIINYDLPWNPMRLEQRIGRI-----HRLGQERDVHIYNMATKHTVE 482 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 E +L+ L K + + ++ L Sbjct: 483 EHILKLLYDKIHLFENVVGEL 503 >gi|307106103|gb|EFN54350.1| hypothetical protein CHLNCDRAFT_135608 [Chlorella variabilis] Length = 877 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 53/194 (27%), Gaps = 45/194 (23%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 A+ + Q A A +V F S L Sbjct: 703 KVAALLERLRQ-----------------DAAATAAGAAAGAGGGAVKSVVFSQFTSYLDL 745 Query: 84 LQK----------AFPQGRTLDKDPCTIQEWNEGKIP---LLFAHPASCGHGLNLQYGGN 130 ++ + + ++ + +L + G GLNL + Sbjct: 746 VEAALAGEGFVTGRLDGKTSAKRRGEVLRAFQSSSASSPTVLLVSLKAGGVGLNLTA-AS 804 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + WW+ +Q ++R+ Q + ++I+E +L K + Sbjct: 805 RVHLLDPWWNPSVEEQAMDRVHRLGQTR--------------ADSIEERMLALQEQKRDL 850 Query: 191 QDLLLNALKKETIH 204 + + K E I Sbjct: 851 MRVAFDRRKAEDIR 864 >gi|295706576|ref|YP_003599651.1| ATP-dependent RNA helicase [Bacillus megaterium DSM 319] gi|294804235|gb|ADF41301.1| ATP-dependent RNA helicase [Bacillus megaterium DSM 319] Length = 557 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 72/196 (36%), Gaps = 13/196 (6%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + L + + + ++ LQ ++ + D+K+ I Sbjct: 322 VYMTLKNMLERQEDPNSALTEHMITPLMELLQQVPQNAKAEKVLELVQKIDDKV-----I 376 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I A + + F G K Q + + A + G G Sbjct: 377 IFTEYRATQLYLQWYLKQHGITSVPFRGGFKRGKKDWMKQLFES-HAQVFIAT-EAGGEG 434 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NLQ+ + ++ + L W+ +Q I R+ + G K V +Y L Q+T++E +L+ Sbjct: 435 INLQF-CHHIINYDLPWNPMRLEQRIGRV-----HRLGQKHDVHIYNLAIQHTVEEHILK 488 Query: 183 RLRTKSTIQDLLLNAL 198 L K + + ++ L Sbjct: 489 LLYEKINLFERVVGEL 504 >gi|115903652|ref|XP_794091.2| PREDICTED: similar to Brg1 [Strongylocentrotus purpuratus] gi|115972944|ref|XP_001188944.1| PREDICTED: similar to Brg1 [Strongylocentrotus purpuratus] Length = 1736 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 55/169 (32%), Gaps = 12/169 (7%) Query: 35 LANGAVYYDEEKHWKEV----HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +G Y ++ + K +++ + + F Sbjct: 1132 IISGPDLYRVGGKFELLDRILPKLKALGHRILLFCQMTTLMTILEDFFVYRGFKYLRLDG 1191 Query: 91 GRTLDKDPCTIQEWNEGKIPLLF--AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 D +Q +NE P + G GLNLQ + ++ F W+ + Sbjct: 1192 TTKADDRGILLQTFNEANCPYFIFMLSTRAGGLGLNLQT-ADTVILFDSDWNPHQ----- 1245 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G V V L+ +++E +L R K + ++ A Sbjct: 1246 DLQAQDRAHRIGQVNEVRVLRLMTVQSVEEKILAAARWKMNMDSKIIQA 1294 >gi|116196398|ref|XP_001224011.1| hypothetical protein CHGG_04797 [Chaetomium globosum CBS 148.51] gi|88180710|gb|EAQ88178.1| hypothetical protein CHGG_04797 [Chaetomium globosum CBS 148.51] Length = 1110 Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 50/153 (32%), Gaps = 17/153 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGK-IP 110 + +V + S L T + + + + Sbjct: 945 LYPDEPPFKSVVFSGWTSHLDLIQIALDNAGITYTRLDGKMTRTARNAAMDAFRDDHSVQ 1004 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ + G GLNL GN + ++ Q ++R+ + G RAV Sbjct: 1005 VILVSIMAGGLGLNLTA-GNSVYVMEPQFNPAAEAQAVDRV-----HRLGQTRAVRTVRF 1058 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 I +++ +E +LQ K + L ++ + I Sbjct: 1059 IMKDSFEEKMLQLQDKKKKLASLSMDRDPNDRI 1091 >gi|321265706|ref|XP_003197569.1| helicase domain DNA excision repair protein (Rad26L) [Cryptococcus gattii WM276] gi|317464049|gb|ADV25782.1| Helicase domain DNA excision repair protein (Rad26L), putative [Cryptococcus gattii WM276] Length = 1016 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 15/101 (14%) Query: 96 KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I + + + ++ + G GLNL N +V F W + Sbjct: 676 ERQEMIDRFQDREKDHFIMLISTRAGGVGLNLTA-ANKVVIFDPSW------------TM 722 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G KR V VY LI Q TI+EL+ +R K L Sbjct: 723 DRAFRIGQKRTVEVYRLIGQGTIEELIYERQVQKQQSARQL 763 >gi|18606158|gb|AAH22975.1| Smarca2 protein [Mus musculus] Length = 495 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++++NE + + G GLNLQ + +V F W+ + + Sbjct: 26 EDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQA-ADTVVIFDSDWNPHQ-----DLQA 79 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E +L + K + ++ A Sbjct: 80 QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 124 >gi|209489463|gb|ACI49222.1| hypothetical protein Csp3_JD05.007 [Caenorhabditis sp. PS1010] Length = 1195 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 9/105 (8%) Query: 96 KDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K +N+ + L+ + G N+ N +V F W+ + Sbjct: 855 KRDAVQTHFNDADNHRARLMLISTRAGSLGTNMVS-ANRVVIFDACWNPSH-----DTQS 908 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V++Y IAQ T++E + +R TK + +++ Sbjct: 909 LFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDE 953 >gi|66812928|ref|XP_640643.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60468538|gb|EAL66541.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1021 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 6/111 (5%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +++ N+ + + G GL L ++F L W Sbjct: 688 QNRNDYVNDFQNDPNCRVAVLSITAAGTGLTLTA-ATCVIFAELSWTPGVLF-----QAE 741 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G +V V YLIA T+DE++ + +K T+ +L+ ++++ Sbjct: 742 DRAHRYGQTSSVLVQYLIALGTVDEMIWSLVESKKTLLGRVLDDEDGQSLN 792 >gi|145607271|ref|XP_361651.2| hypothetical protein MGG_12155 [Magnaporthe oryzae 70-15] gi|145014859|gb|EDJ99427.1| hypothetical protein MGG_12155 [Magnaporthe oryzae 70-15] Length = 1430 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 22/186 (11%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN----------SD 80 K L++ + D+ + + K II+ H+ Sbjct: 1043 KFLEICD--RTPDKPVTPSAKTTAIKMQVLEWLHKYPDDKIIIFTHWVPLARILGRVFEA 1100 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + + ++++ LL A G LNL N ++ Sbjct: 1101 EKIRFLYYFGSMGMGQRKTAVEKFTTIIGPLAPKLLIASSRCGGQALNLTA-ANRVILVD 1159 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 LWW+ +ER R + G + + ++ + TIDE +L K L Sbjct: 1160 LWWNTA-----VERQAFGRVHRIGQTKDTYYVKIVTRKTIDERLLDMQDEKDAKISNTLQ 1214 Query: 197 ALKKET 202 + + Sbjct: 1215 DGEHKV 1220 >gi|75764646|ref|ZP_00744080.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487868|gb|EAO51650.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 340 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 20/203 (9%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y++F++ ++ E + A+K + QLA ++ K++ ++ Sbjct: 156 KMYNEFKKHHIIEIGEELLIGDTPAAKKLYLRQLAGSY------------NEHKLQYIKD 203 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +IE N II +A + T++ D + + + + + Sbjct: 204 LIESTNDRIIIFYNFKKEYMALVDLIERPIATINGDIKDLSAYEKHDNSVTLIQYQAGAM 263 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ I+ F + R + G KR F YYL+ +I+ +L Sbjct: 264 GLNLQKANKIVYFTLTDKS------ELFEQSKKRTLRIGQKRLGFYYYLLTDGSIEWRML 317 Query: 182 QRLRTKSTIQDLLLNALKKETIH 204 L+ + D L K+E ++ Sbjct: 318 DVLKERRDYTDALFE--KEEDVN 338 >gi|308174252|ref|YP_003920957.1| RNA polymerase-associated helicase protein [Bacillus amyloliquefaciens DSM 7] gi|307607116|emb|CBI43487.1| putative RNA polymerase-associated helicase protein [Bacillus amyloliquefaciens DSM 7] Length = 617 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 77/201 (38%), Gaps = 23/201 (11%) Query: 3 QYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y ++ L + +A A+ + Q+ K + V + Sbjct: 382 VYMTLKK----MLDQKEQKAPAFDEQTIANLMDRINQVT------QNSKAIQVVDLIQKI 431 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +VII A I F F G K + GK+ +L A Sbjct: 432 NDKVIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFR-GKVQVLIAT-E 489 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NLQ+ N ++ + L W+ +Q I RI + G +R V +Y + ++T++ Sbjct: 490 AGGEGINLQF-CNHIINYDLPWNPMRLEQRIGRI-----HRLGQERDVHIYNMATKHTVE 543 Query: 178 ELVLQRLRTKSTIQDLLLNAL 198 E +L+ L K + + ++ L Sbjct: 544 EHILKLLYDKIHLFENVVGEL 564 >gi|326678432|ref|XP_002666261.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Danio rerio] Length = 607 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 17/156 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQEW- 104 +K ++ ++ +V H S L + + + Sbjct: 23 VKDYIKMMLESEQLKFLVFAHHLSMLQACTEAVIEAKAGYIRIDGSVPSAERIQLVHRFQ 82 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + + G GL + +VF L+W+ + R + G Sbjct: 83 NDPDTRVAVLSIQAAGQGLTFTA-ASHVVFAELYWNPGHI-----KQAEDRAHRIGQTAT 136 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V ++YLIA+ T D ++ L K T+ LN K+ Sbjct: 137 VHIHYLIAKGTFDTVMWAMLNRKETVTGSALNGKKE 172 >gi|167462178|ref|ZP_02327267.1| SNF2-related protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 421 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 22/202 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 KQY +FQ+ ++ G+ + + +K + QLA + EK + L Sbjct: 237 KQYREFQKHRMIEIDGKTLVGDTTLTKMLYLRQLAG------------MYNPEKPERLRE 284 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFP----QGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 ++E + +IV Y+F ++ +Q ++ D + + E + Sbjct: 285 LLESTSD-RVIVFYNFRAEFEVIQNLCQTLERPLSMINGDGRDLTAYLERDDSVTAVQFQ 343 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G NLQ V+ S D +Q + RI Q F YYL+ + +I+ Sbjct: 344 SGALGENLQ-LAKHAVYMSPPLDSILFEQSLARIRRIGQ----QSDTCFYYYLVTKGSIE 398 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 E + + L+ + L L+ Sbjct: 399 EHIYETLKKRKDFTQYLFEELE 420 >gi|154315820|ref|XP_001557232.1| hypothetical protein BC1G_04482 [Botryotinia fuckeliana B05.10] gi|150846878|gb|EDN22071.1| hypothetical protein BC1G_04482 [Botryotinia fuckeliana B05.10] Length = 1660 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 48/120 (40%), Gaps = 8/120 (6%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLW 138 L K + + I +N L + G G+NL + ++ Sbjct: 734 LQLPFKRLDGTVSTLEKQKRIDAFNAPNSELFAFLLSTRAGGVGINL-ATADTVIIMDPD 792 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++ + + ++R + G K+ V V+ L+ +++ +E ++Q R K + L+ ++ Sbjct: 793 FNPHQ-----DIQALSRAHRIGQKKKVLVFQLVTKDSAEEQIVQVGRKKMALDQALIESI 847 >gi|47226328|emb|CAG09296.1| unnamed protein product [Tetraodon nigroviridis] Length = 671 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 70/219 (31%), Gaps = 35/219 (15%) Query: 5 HKFQRELYCDLQGENIEAFNS----------ASKTVKCLQLANGAVYYDEEKHWKEVH-- 52 + + ++ L + + A+ + QLA G EEK V Sbjct: 449 RRLKSDVLSQLPAKQRKVVTVTIDGINSRIKAALSAAAKQLAKGHPNKKEEKEALLVFYN 508 Query: 53 ---DEKIKALEVIIE---KANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDK 96 + K++A+ I + +V H L + + Sbjct: 509 HTAEAKLQAIMEYITDMLEGGREKFLVFAHHKLVLDHITAELEKKNVVYIRIDGSTPSAE 568 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +++ + + GL L ++++F L+W+ R Sbjct: 569 RQQLCEKFQFSSSSCVAVLSITAANMGLTLHS-ADLVIFAELFWNPGVLI-----QAEDR 622 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G V ++YL+A+ + D+ + ++ K + + + Sbjct: 623 VHRIGQTNNVNIHYLVAKGSADDHLWPLIQEKMNVLEQV 661 >gi|41052581|dbj|BAD07923.1| SNF2 domain/helicase domain-containing protein-like [Oryza sativa Japonica Group] gi|41052776|dbj|BAD07645.1| SNF2 domain/helicase domain-containing protein-like [Oryza sativa Japonica Group] gi|222622037|gb|EEE56169.1| hypothetical protein OsJ_05089 [Oryza sativa Japonica Group] Length = 2200 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 73/231 (31%), Gaps = 60/231 (25%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKAN--AAPIIVAYHFNSD 80 K ++ ++ N + ++ K+ L+ I+ K + +++ Sbjct: 1262 KCMELRKVCNHPLLSYPFMNYYGKDFIIRSCGKLWNLDRILIKLHRSGHRVLLFSTMTKL 1321 Query: 81 LARLQKAFPQGRTLDKD----------PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYG 128 L L++ + + + I ++N + + G GLNLQ Sbjct: 1322 LDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNRPNSDCFIFLLSIRAAGRGLNLQS- 1380 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ--------------- 173 + +V + + + E V R + G R V V Y+ A Sbjct: 1381 ADTVVIYDPDPNPQN-----EEQAVARAHRIGQTRDVKVIYMEAVVDNISSYQKEDELRN 1435 Query: 174 -----------------NTIDELVL-QRLRTKSTIQDLLLNALK--KETIH 204 +I+ L+ + K + D ++NA + + T H Sbjct: 1436 GGSGDLEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTH 1486 >gi|317149017|ref|XP_001823066.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40] Length = 1364 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 8/151 (5%) Query: 48 WKEVHDEKIKALEVIIEKANAAPIIVAYHFN-SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 + DE I+A + I+ +++ P + R + + +N Sbjct: 957 MNSIIDESIRAGDKILVFSHSIPTLDYIEHVLRSSNRKYSRLDGRTPVVTRQDATKRFNL 1016 Query: 107 G-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + + G GLN+ N ++ F + + E V R + G ++ V Sbjct: 1017 GSEKQVYLISTRAGGLGLNI-PVANRVIIFDFKFSP-----VWEEQAVGRAYRLGQQKPV 1070 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY IA T +E++ + K+ + +++ Sbjct: 1071 FVYRFIAGGTFEEVMYNKAVFKTQLAFRVVD 1101 >gi|296809774|ref|XP_002845225.1| DNA repair protein rad5 [Arthroderma otae CBS 113480] gi|238842613|gb|EEQ32275.1| DNA repair protein rad5 [Arthroderma otae CBS 113480] Length = 1178 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 6/88 (6%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL N + WW +E + R + G R V Sbjct: 1071 PPANVLLISLRAGGVGLNLT-VANHVFMMDPWWSFA-----VEAQAIDRVHRMGQLRDVK 1124 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V + +N+I+ +L+ K I L Sbjct: 1125 VSRFVVKNSIEGRILRIQERKMMIAGSL 1152 >gi|49257012|dbj|BAD24804.1| lymphoid specific helicase variant9 [Homo sapiens] Length = 809 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 55/180 (30%), Gaps = 36/180 (20%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 564 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 623 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 S L L ++++N ++ Y S Sbjct: 624 MTSMLDILMDYCH-----------LRDFN------------FSRLDGSMSYSEREKNMHS 660 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 D E + + R + G + V VY L+ NTID+ +++R K ++ L+++ Sbjct: 661 FNTDPEVN-PQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIH 719 >gi|319651521|ref|ZP_08005649.1| DNA/RNA helicase protein [Bacillus sp. 2_A_57_CT2] gi|317396836|gb|EFV77546.1| DNA/RNA helicase protein [Bacillus sp. 2_A_57_CT2] Length = 562 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQ 102 + K + II+ N +I+ + + LQ F G K + Sbjct: 358 NSKAQKALEIIQNIND-KVIIFTEYRATQMYLQWFLKQYGITSVPFRGGFKRGKKDWMRE 416 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + +L A + G G+NLQ+ N ++ F L W+ +Q I RI + G + Sbjct: 417 LFQK-NAQVLIAT-EAGGEGINLQF-CNHIINFDLPWNPMRLEQRIGRI-----HRLGQE 468 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + V +Y ++T++E V++ L K + + ++ L Sbjct: 469 KDVMIYNFATKDTVEEHVMKLLYEKIHLFEKVIGDL 504 >gi|302392306|ref|YP_003828126.1| helicase domain protein [Acetohalobium arabaticum DSM 5501] gi|302204383|gb|ADL13061.1| helicase domain protein [Acetohalobium arabaticum DSM 5501] Length = 500 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 68/159 (42%), Gaps = 21/159 (13%) Query: 53 DEKIKALEVIIEKANAAP-----------IIVAYHFNSDLARLQKAFPQGRTLDKDPCTI 101 ++K++ +E ++++ + I Y + L ++ T + Sbjct: 313 NQKVQVVEELLKEIDGQAVIFTEYLATQNYICYYLYQRGLMPVKFDGTLNDTQKERA--- 369 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + +L A+ G+NLQ+ N+++ + L W+ + +Q I R+ + G Sbjct: 370 KRFFAEQGDVLV-STAAGRQGINLQF-CNVIINYDLPWNPMKLEQRIGRV-----HRLGQ 422 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V +Y L + TI+E ++ L K + + ++ L K Sbjct: 423 TEEVKIYNLCTKGTIEEKIVNVLHDKINLFESVVGNLDK 461 >gi|28278071|gb|AAH39796.1| Hltf protein [Mus musculus] Length = 163 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 51/150 (34%), Gaps = 19/150 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEWNE---GKIPL 111 K +V F + L+ ++ K +IQ + G + Sbjct: 2 KDPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQRFQNTEAGSPTI 61 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G GLNL + + W+ Q +R + G K+ V + I Sbjct: 62 MLLSLKAGGVGLNLCA-ASRVFLMDPAWNPAAEDQCFDRC-----HRLGQKQEVIITKFI 115 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +++++E +L+ TK + K + Sbjct: 116 VKDSVEENMLKIQNTKRDLAAGAFGTKKTD 145 >gi|296812409|ref|XP_002846542.1| transcription termination factor 2 [Arthroderma otae CBS 113480] gi|238841798|gb|EEQ31460.1| transcription termination factor 2 [Arthroderma otae CBS 113480] Length = 1166 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 66/185 (35%), Gaps = 26/185 (14%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARL-----------QK 86 +Y K + + E + + ++ + S L + Sbjct: 981 LYEGPHTKTKALISSLLDTAEENKKSPHEPPIKSVIFSSWTSHLDLIEVALEENGLTGYA 1040 Query: 87 AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +L + I+ + + + +L + G GLNL G+++ ++ Sbjct: 1041 RLDGTMSLKQRNSAIETFSKDDDVTILLVTIGAGGVGLNLTA-GSMVYIMEPQYNPATIA 1099 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN------ALK 199 Q I+R+ + G R V I +++I+E + + + K + D+ LN ++ Sbjct: 1100 QAIDRV-----HRIGQTREVTTIQYIMKDSIEEKITELAKRKQRLADMSLNRKMDRREMQ 1154 Query: 200 KETIH 204 KE + Sbjct: 1155 KERLE 1159 >gi|328847835|gb|EGF97150.1| hypothetical protein MELLADRAFT_87579 [Melampsora larici-populina 98AG31] Length = 220 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 54/157 (34%), Gaps = 7/157 (4%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP- 98 Y + K+V K + +I + + T + Sbjct: 34 AYLVSQLKNKQVPLHKGLCKKTVIYTQWRCFMEWIKIGLDCHGIESGSLHGEMTPQERTL 93 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + N I + G GLN+ + + W+ + QQ I+R+ + Sbjct: 94 QLNRFQNNNNIEAFIVSIEAGGVGLNMT-CADEVYLMDAHWNPQIVQQAIDRL-----HR 147 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G V VY+++A ++++ + + K+++ ++ Sbjct: 148 IGQTHPVKVYHVVAGGSVEQHLFNVQKKKASLARKVI 184 >gi|70953048|ref|XP_745650.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56526041|emb|CAH75841.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 1029 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 7/117 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + I+E+ + + + G GLNL N ++ Sbjct: 872 KRTQNNIYVRLDGSTNTIERQQIIKEFSENDNVFIFLLSTKAGGVGLNL-IAANHVILMD 930 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 W+ +R R + G K+ V++Y L +NTI+E VL+ + K + Sbjct: 931 QDWNP-----HNDRQAEDRVHRLGQKKEVYIYRLCCKNTIEETVLKCCKAKLHLDQA 982 >gi|302851167|ref|XP_002957108.1| hypothetical protein VOLCADRAFT_107529 [Volvox carteri f. nagariensis] gi|300257515|gb|EFJ41762.1| hypothetical protein VOLCADRAFT_107529 [Volvox carteri f. nagariensis] Length = 1252 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 54/192 (28%), Gaps = 17/192 (8%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + Q + + + + ++ Q + + Sbjct: 845 LYTQSQAQFGAYVDSGTLLNNYAHIFDLLIRLRQAVDHPYLVIYSATNNPATAAPAAVND 904 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 E + N+ +E +G + A+CG Sbjct: 905 NGGESGDGNAPSPDAVINTGAYGGCGGGMAIPICG---LCHEEIEDGVV-------AACG 954 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HG + ++ WW+ QQ +RI + G + + V + TI+E + Sbjct: 955 HGFCRTCVIDHVMLMDPWWNPAVEQQAQDRI-----HRLGQYKPITVVRFVIAGTIEERI 1009 Query: 181 LQRLRTKSTIQD 192 L+ K + + Sbjct: 1010 LKLQEKKQLVFE 1021 >gi|119715910|ref|YP_922875.1| helicase domain-containing protein [Nocardioides sp. JS614] gi|119536571|gb|ABL81188.1| helicase domain protein [Nocardioides sp. JS614] Length = 723 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 6/126 (4%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 F + R T + N+ ++ ++ + G G+NLQ N+++ Sbjct: 575 FAARGLRYSSIRGDQTTAVRQRNIDAFVNDPEVAVIVCSLTAAGVGVNLQVASNVVLAEL 634 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W D E+ + R + G + V + +IA TID V + + +K+ + + L+ Sbjct: 635 SWTDAEQT------QAIDRVHRIGQEEPVTAWRIIASQTIDTRVAELIDSKAGLAAVALD 688 Query: 197 ALKKET 202 +E Sbjct: 689 GSDEEI 694 >gi|322788045|gb|EFZ13883.1| hypothetical protein SINV_02167 [Solenopsis invicta] Length = 159 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 20/138 (14%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNL 125 IV F + T+ + TI ++N + + G G+NL Sbjct: 1 MIHIVESLFQCE-GYTYLRMDGTTTMSQRQQTIHKFNNVHDTSYFVFLLTTRVGGLGVNL 59 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 G N ++ + W+ + R + G + V Y LI TI+E Sbjct: 60 T-GANRVIIYDPDWNPAT-----DAQAKERAWRIGQNKQV--YRLITAGTIEE------- 104 Query: 186 TKSTIQDLLLNALKKETI 203 K + + +L+ L + + Sbjct: 105 -KLLLSNKVLDVLNQRRL 121 >gi|302413912|ref|XP_003004788.1| transcription termination factor 2 [Verticillium albo-atrum VaMs.102] gi|261355857|gb|EEY18285.1| transcription termination factor 2 [Verticillium albo-atrum VaMs.102] Length = 868 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 40/107 (37%), Gaps = 6/107 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + I ++ + GLNL GN + ++ Q ++R Sbjct: 745 MSRNARTKAMDEFRDNPSIHVILVSIMAGSLGLNLTS-GNNVYVMEPQYNPAAEAQAVDR 803 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + G KR V I +N+ +E +++ K + L ++ Sbjct: 804 V-----HRLGQKRPVQTVRYIMRNSFEEKMIELQDKKKKLASLSMDG 845 >gi|309355669|emb|CAP38453.2| CBR-RAD-26 protein [Caenorhabditis briggsae AF16] Length = 1340 Score = 71.3 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 61/194 (31%), Gaps = 24/194 (12%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI---KALEVIIEK 65 +E + + + A ++ K + + + LE I+ K Sbjct: 836 QEGVLENGYKIVVALEILDESTK-------------IGEKILIFSQNLTALDMLEEILRK 882 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTL-DKDPCTIQEWN-EGKIPLLFAHPASCGHGL 123 + H G T I +N E + L + G+ Sbjct: 883 RQVVKKEKSEHQERWEKNRNYLRLDGTTSGADREKLINRFNSEPGLHLFLISTRAGSLGI 942 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL N + W+ + V R + G ++ FVY LI N+++ + R Sbjct: 943 NLVS-ANRCIIIDACWNP-----CHDAQAVCRVYRYGQQKKTFVYRLIMDNSMERSIFNR 996 Query: 184 LRTKSTIQDLLLNA 197 +K +Q +++ Sbjct: 997 QISKHGLQQRVVDD 1010 >gi|325191520|emb|CCA25894.1| PREDICTED: similar to SNF2 domaincontaining protein [Albugo laibachii Nc14] Length = 966 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 52/153 (33%), Gaps = 17/153 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEW 104 + L+++ + + IV F + L +Q G +D Sbjct: 801 FQELDMMKTRDPSGKAIVFSQFVNMLDLIQFRLKLGGIPCVTLSGNMSMDARDRILESFR 860 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 ++ + L + G LNL + + WW+ Q I+R + G + Sbjct: 861 SDVNVTTLLISLKAGGVALNLT-IASHIFLMDPWWNPAAESQAIDR-----THRLGQFKP 914 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + I +I++ +LQ K I D + Sbjct: 915 IQATHFIIAGSIEDRILQLQDKKRLIFDATVGG 947 >gi|149184879|ref|ZP_01863196.1| SNF2 family helicase [Erythrobacter sp. SD-21] gi|148830990|gb|EDL49424.1| SNF2 family helicase [Erythrobacter sp. SD-21] Length = 556 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 72/214 (33%), Gaps = 34/214 (15%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY------------DEEKHWKEVHDEKI 56 E+ + + A N T + + K+ Sbjct: 328 DEVLAETLEKYPVAGN-LVATGQLQLFCAHPWLQGSGDPERDQDAGINPSAGMPLFTPKV 386 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKA------------FPQGRTLDKDPCTIQ 102 + I+E+ + +++ FN L++A G ++ + Sbjct: 387 ERAIAILEEAFRSGRKVLIFAIFNRCGEILREAAQGRLPDAYWGAINGGTPQEERQAIVD 446 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ P L +P + G GLN+ +++ F+ W+ E R + G Sbjct: 447 AFSCHDGPGCLVLNPKAAGAGLNITA-ATVVIHFTQAWNPAL-----ESQASARAHRRGQ 500 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V++Y L ++T++ +++ R + + + + + Sbjct: 501 TEPVYIYRLFYEDTVERVMIDRSQWRRELGNEAV 534 >gi|114680096|ref|YP_758509.1| global transactivator [Plutella xylostella multiple nucleopolyhedrovirus] gi|91982160|gb|ABE68428.1| global transactivator [Plutella xylostella multiple nucleopolyhedrovirus] Length = 506 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 63/201 (31%), Gaps = 32/201 (15%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-----------VIIEKANAAPI 71 + +K Q+ K+ E +D I + I Sbjct: 298 QHVLWLILKLRQICCHPYLAMHCKNILETNDCFKMDYMSSKCKRVLDLVDDILNTSDDKI 357 Query: 72 IVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEG---KIPLLFAHPAS 118 I+ + L + F Q ++ +N+ + +L Sbjct: 358 ILVSQWVEYLKIFENFFKQKNIATLMYTGQLKVEDRILAETTFNDAANTQHRILLLSIKC 417 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNTI 176 G GLNL GGN +V W+ + IE R + G + +VY + + N+I Sbjct: 418 GGVGLNL-IGGNHIVMLEPHWNPQ-----IELQAQDRISRMGQTKNTYVYKMLNVEDNSI 471 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 ++ + QR K + + Sbjct: 472 EKYIKQRQDKKIAFVNTVFEE 492 >gi|290343601|ref|YP_003494968.1| hypothetical protein OTV1_129 [Ostreococcus tauri virus 1] gi|260161016|emb|CAY39717.1| hypothetical protein OTV1_129 [Ostreococcus tauri virus 1] Length = 483 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 68/228 (29%), Gaps = 34/228 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFN-------SASKTVKCLQLANGAVYYDE--------EK 46 + Y ++ ++ A + ++ Q Y + + Sbjct: 239 RLYEFVFQDAQETIRDAFKNAISLNSKNMVILEALLRARQTMIWPQMYLDGIAKQNGTQP 298 Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG--------RTLDKDP 98 K++ L +I+ +V F ++ +Q+ ++D Sbjct: 299 EQWVGRSNKMETLFRMIKSHPDEKTLVFCQFKGEMDYIQRNLECPTFRIDGSVPKEERDN 358 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + S G GLNLQ + W+ + R + Sbjct: 359 QVNAFKKAPPGAVFIIQIKSGGQGLNLQE-ATRVYITGPSWNPATEL-----QAIGRAHR 412 Query: 159 AGFKRAVFVYYLIAQN-----TIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V+V LI + +++E +L KS + +LN + E Sbjct: 413 TGQSKPVYVKKLIYKEGDAFISVEEEILALQGHKSIVCSKVLNDERIE 460 >gi|319945477|ref|ZP_08019737.1| helicase [Lautropia mirabilis ATCC 51599] gi|319741263|gb|EFV93690.1| helicase [Lautropia mirabilis ATCC 51599] Length = 1109 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 70/225 (31%), Gaps = 36/225 (16%) Query: 3 QYHKFQRELYCDLQG-ENIEAFNSASKTVKCLQLANGAVYYDEEK---HWKEVHDEKIKA 58 Y + +G N L ++ + +V+ K Sbjct: 870 LYSQTLEGYRASREGLGKSPFKNQLGVLHYLRLLCTDPQEFNMKGSQRDRLDVYRAKAPK 929 Query: 59 LEVII-----EKANAAPIIVAYHFNSDLARLQKAFPQ----------------GRTLDKD 97 ++ ++ + +IV F LQ R +D Sbjct: 930 MDWLLTQLKRIQRWNEKVIVFCEFREVQRLLQSCIEVELGYSATIINGDTSASSRNVDSR 989 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ + E +L P + G G+N+Q N +V + W+ + E R Sbjct: 990 QKRIRAFQEKPGFGVLILSPVAVGFGVNIQA-ANHVVHYMRTWNPAK-----EDQATDRA 1043 Query: 157 RQAGFKRAVFVYYL-IAQN---TIDELVLQRLRTKSTIQDLLLNA 197 + G + V VYY +A + T D + Q L K + +LN Sbjct: 1044 YRIGQTKDVHVYYPTVAADDFVTFDVRLDQLLTKKRELAGDMLNG 1088 >gi|297301538|ref|XP_001094310.2| PREDICTED: lymphoid-specific helicase isoform 3 [Macaca mulatta] Length = 808 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 55/180 (30%), Gaps = 36/180 (20%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 563 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 622 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 S L L ++++N ++ Y S Sbjct: 623 MTSMLDILMDYCH-----------LRDFN------------FSRLDGSMSYSEREKNMHS 659 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 D E + + R + G + V VY L+ NT+D+ +++R K ++ L+++ Sbjct: 660 FNMDPEVN-PQSDLQAQDRCHRIGQTKPVVVYRLVTANTVDQKIVERAAAKRKLEKLIIH 718 >gi|269796315|ref|YP_003315770.1| DNA/RNA helicase [Sanguibacter keddieii DSM 10542] gi|269098500|gb|ACZ22936.1| DNA/RNA helicase, superfamily II, SNF2 family [Sanguibacter keddieii DSM 10542] Length = 741 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 61/158 (38%), Gaps = 21/158 (13%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK------------AFPQGRTLDKDP 98 K+ L I+E + ++V +F + +++ G + Sbjct: 547 SSKLGRLLEILEDAAESGEKVVVFSYFRDVVDLVRRTVAETRPDAVYGPLWGGVAAEDRQ 606 Query: 99 CTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ +L A + G GLN+Q N++V E V R R Sbjct: 607 AAVDDFTAAPPGAVLVAQVDAGGVGLNIQA-ANVVVICEPQLKPTT-----EAQAVARVR 660 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G R+V V+ L+ + ++DE + + L KS + D + Sbjct: 661 RMGQVRSVRVHRLLVEGSVDERIRELLTAKSRVFDEYV 698 >gi|325117137|emb|CBZ52689.1| putative DNA excision repair protein [Neospora caninum Liverpool] Length = 1357 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 21/112 (18%) Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G + + + + I L G GLNL + Sbjct: 979 GVPVASRHAIVDRFQRDSSIFALLLTTRVGGVGLNLTAA--------------------D 1018 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R+ R + G + V +Y L+ +++E V R K + +L ++ Sbjct: 1019 RVARERSWRIGQSKDVCIYRLLTSGSMEEKVYHRQVFKFFLSQKVLQDPRQR 1070 >gi|160881051|ref|YP_001560019.1| SNF2-related protein [Clostridium phytofermentans ISDg] gi|160429717|gb|ABX43280.1| SNF2-related protein [Clostridium phytofermentans ISDg] Length = 660 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 54/146 (36%), Gaps = 8/146 (5%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLL 112 K + + N Y + Q+ ++++ + ++ Sbjct: 490 KNIHDLKLYLENNGIKCQELYG---AIPVEQEDMNSDNDTLTREKIVRDFQKENSEFKVI 546 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A+P + ++L + ++ ++ + Q +RI + YY+++ Sbjct: 547 IANPFAVAESISLHKSCHNAIYLERTFNAAHYMQSKDRIHRYGLKAGIETN---YYYILS 603 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 +++IDE++ +RL K ++ ++ Sbjct: 604 KDSIDEIIHERLNLKERRMTEIMESM 629 >gi|284029135|ref|YP_003379066.1| helicase domain-containing protein [Kribbella flavida DSM 17836] gi|283808428|gb|ADB30267.1| helicase domain protein [Kribbella flavida DSM 17836] Length = 708 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 7/125 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 ++ + ++ I + N+ + + + G GLNLQ N+++ Sbjct: 567 AERGIRYCSIRGDQSSTARQKNIDAFVNDAGVAIAVCSLLTAGVGLNLQVASNVVLAELS 626 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W + E+ + R + G + V + +IA TID + + K+ + + L+ Sbjct: 627 WTNAEQT------QAIDRVHRIGQEEPVTAWRIIAAQTIDTRIADLIDAKAGLAAMALDG 680 Query: 198 LKKET 202 +E Sbjct: 681 SDEEV 685 >gi|308468126|ref|XP_003096307.1| CRE-RAD-26 protein [Caenorhabditis remanei] gi|308243350|gb|EFO87302.1| CRE-RAD-26 protein [Caenorhabditis remanei] Length = 1304 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 50/144 (34%), Gaps = 10/144 (6%) Query: 56 IKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLF 113 + LE I+ K + + R + I +N E + L Sbjct: 838 LDMLEEILRKRQINGKNGPGERW--EKNRNYLRLDGTTSGADREKLINRFNSEPGLHLFL 895 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G+NL N + W+ + V R + G ++ FVY LI Sbjct: 896 ISTRAGSLGINLVS-ANRCIIIDACWNP-----CHDAQAVCRVYRYGQQKKTFVYRLIMD 949 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 N+++ + R +K +Q +++ Sbjct: 950 NSMERSIFNRQISKHGLQQRVVDD 973 >gi|260946986|ref|XP_002617790.1| hypothetical protein CLUG_01249 [Clavispora lusitaniae ATCC 42720] gi|238847662|gb|EEQ37126.1| hypothetical protein CLUG_01249 [Clavispora lusitaniae ATCC 42720] Length = 568 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 49/120 (40%), Gaps = 6/120 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + ++ + ++ I + + + G G+NL +I++ + W+ Sbjct: 1 MNIVESMVRRLMRIESRLSMIIMHQIQRKFIFLLTTRAGGLGINLTT-ADIVILYDSDWN 59 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + + + R + G K+ V V+ + +N I+E V+ R K + L++ ++ Sbjct: 60 PQA-----DLQAMDRAHRIGQKKQVQVFRFVTENAIEEKVMDRAAQKLRLDQLVIQQGRQ 114 >gi|258511768|ref|YP_003185202.1| SNF2-like protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478494|gb|ACV58813.1| SNF2-related protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 572 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 84/225 (37%), Gaps = 37/225 (16%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG---AVYYDEEKHWKEVHDEKIKALE 60 Y Q L + + + ++ + A+ E+ K ++ + L+ Sbjct: 304 YEAVQAFLRSEFERSQTARTSILPLITLQREICSSAYAALLSLEKMLKKARDPDRARCLQ 363 Query: 61 VIIE------------------KANAAPIIVAYHFN-------SDLARLQKAFPQGRTLD 95 +IE + II+ + L + + R Sbjct: 364 SLIEQGTSIPSYAKVEAVLKMLEDAPEKIIIFTEYRASQDFLMYTLKKHGISAVPFRGGF 423 Query: 96 KD--PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++E KI +L A S G G+NLQ+ + ++ + L W+ +Q I RI Sbjct: 424 RRGKKDWMRELFSKKIRVLVAT-ESGGEGINLQF-CHHMINYDLPWNPMRLEQRIGRI-- 479 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G A + +L+ ++TI+E +++ L+ K + + ++ L Sbjct: 480 ---HRLGQTHACHIAHLVTKDTIEEHIMEILQEKVRMFEAVIGRL 521 >gi|163955122|ref|YP_001648226.1| hypothetical protein OsV5_149f [Ostreococcus virus OsV5] gi|163638571|gb|ABY27930.1| hypothetical protein OsV5_149f [Ostreococcus virus OsV5] Length = 480 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 66/214 (30%), Gaps = 31/214 (14%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVHDEKIKALE 60 + + + ++ Q+ Y + + K++ L Sbjct: 254 KNAISIISKNMV----ILECLLRARQVMIWPQMYLDGIAKQNGTQPEQWVGRSNKMETLF 309 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQG--------RTLDKDPCTIQEWNEGKIPLL 112 +I+ +V F ++ +Q+ ++D + Sbjct: 310 RMIKSHPDEKTLVFCQFRGEMDFIQQNMECPTFRIDGSVPKEERDNQVNAFKKAPPGAVF 369 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S G GLNLQ + W+ Q+I R + G + V+V LI Sbjct: 370 IIQIKSGGQGLNLQE-ATRVYITGPSWNPATELQVIGR-----AHRTGQTKPVYVKKLIY 423 Query: 173 QN-----TIDELVLQRLRTKSTIQDLLLNALKKE 201 + +++E +L KS + +LN + E Sbjct: 424 KEGDGFISVEEEILALQGHKSIVCSKVLNDERIE 457 >gi|307203054|gb|EFN82245.1| Transcriptional regulator ATRX-like protein [Harpegnathos saltator] Length = 2019 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 9/120 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 L + D + +N+ + L + G G+NL N ++ F Sbjct: 1705 LGLDYFRLDGQTSADNRSAWCRIFNKPTNTRARLFLISTRAGGLGINLTA-ANRVIIFDA 1763 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q I RI + G K+ +VY +A T++E + R TK ++ +++ Sbjct: 1764 SWNPSHDVQSIFRI-----YRFGQKKPCYVYRFLAAKTMEEKIYNRQVTKLSLSCRVVDE 1818 >gi|151941201|gb|EDN59579.1| hypothetical protein SCY_3612 [Saccharomyces cerevisiae YJM789] Length = 722 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 19/176 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + + +K LQL + + + I+EK + + F+ D Sbjct: 544 SKSSKITALLKELQL----LQDSSAGEQVVIFSQ-FSTYLDILEKE------LTHTFSKD 592 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 +A++ K + ++ + +L + G GLNL + W Sbjct: 593 VAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLT-CASHAYMMDPW 651 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W +E + R + G +V V I Q++I+E +L+ K TI + + Sbjct: 652 WSPS-----MEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 702 >gi|170048582|ref|XP_001853354.1| transcriptional regulator ATRX [Culex quinquefasciatus] gi|167870647|gb|EDS34030.1| transcriptional regulator ATRX [Culex quinquefasciatus] Length = 1334 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 6/87 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L + G G+NL N ++ F + W+ + + R + G + ++Y Sbjct: 982 LFLISTRAGGLGINLVA-ANRVIIFDVSWNPSH-----DIQSIFRVYRFGQVKPCYIYRF 1035 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 +A T++E + +R TK I +++ Sbjct: 1036 LAMGTMEEKIYERQVTKQAISKRVIDE 1062 >gi|222631484|gb|EEE63616.1| hypothetical protein OsJ_18433 [Oryza sativa Japonica Group] Length = 1364 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 23/175 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------- 87 + + E + V + +A +++ F L +++ Sbjct: 1129 PMLERLRSNPYEGVKTRFVMEVVRLCEALKEKVLIFSQFIQPLELIKEHLRKIFKWREGK 1188 Query: 88 ---FPQGRTLDK-DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+ L + +I+ +N +L A +C G++L G + +V + W+ Sbjct: 1189 EILQMDGKILPRYRQNSIEVFNNPDSDARVLLASTRACCEGISLT-GASRVVLLDVVWNP 1247 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R ++R + G K+ V+ Y LI T + R K + L+ + Sbjct: 1248 A-----VGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1297 >gi|159164908|gb|ABV80237.2| required to maintain repression 1 [Zea mays] gi|159164910|gb|ABV80239.2| required to maintain repression 1 [Zea mays] Length = 1435 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 23/175 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------- 87 + + E + V + +A +++ F L +++ Sbjct: 1202 PMLAKVRSNPYEGVKTRFVIEVVRLSEALREKVLIFSQFIQPLELIKEHLRKFFKWREGK 1261 Query: 88 ---FPQGRTLDK-DPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+ L + +I+ +N +L A +C G++L G + +V + W+ Sbjct: 1262 EILQMDGKILPRYRQASIEAFNNPNNDSRVLLASTRACCEGISLT-GASRIVLLDVVWNP 1320 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R ++R + G K+ V+ Y LI T + R K + L+ + Sbjct: 1321 A-----VGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1370 >gi|326483589|gb|EGE07599.1| DNA repair protein rad5 [Trichophyton equinum CBS 127.97] Length = 1152 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 6/88 (6%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL N + WW +E + R + G R V Sbjct: 1045 PPPSVLLISLRAGGVGLNLT-VANHVFMMDPWWSFA-----VEAQAIDRVHRMGQLRDVK 1098 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V + +N+I+ +L+ K I L Sbjct: 1099 VSRFVVKNSIEGRILKIQERKMMIAGSL 1126 >gi|326472599|gb|EGD96608.1| DNA repair protein Rad5 [Trichophyton tonsurans CBS 112818] Length = 1177 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 6/88 (6%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + G GLNL N + WW +E + R + G R V Sbjct: 1070 PPPSVLLISLRAGGVGLNLT-VANHVFMMDPWWSFA-----VEAQAIDRVHRMGQLRDVK 1123 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V + +N+I+ +L+ K I L Sbjct: 1124 VSRFVVKNSIEGRILKIQERKMMIAGSL 1151 >gi|307111780|gb|EFN60014.1| hypothetical protein CHLNCDRAFT_56509 [Chlorella variabilis] Length = 1238 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 72/228 (31%), Gaps = 62/228 (27%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVII--EKANAAPIIVAYHFNSD 80 K ++ ++ N + + W K+ L+ ++ K +++ Sbjct: 718 KCMELRKVCNHPMLSYPPETWAVGDAIVRQCGKMLVLDRLLVKMKVTGHRVLLFSTMTKL 777 Query: 81 LARLQKAFPQ-------------------GRTLDKDPCTIQEWNEGKIP--LLFAHPASC 119 L L+ L+ IQ++N P + + Sbjct: 778 LDLLEVYLRWRQLPEHLGGGTMQYLRIDGSTALEDRESAIQQFNAKDSPAFIFLLSIRAA 837 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--------- 170 G GLNLQ + +V + + + E + R + G + V V +L Sbjct: 838 GRGLNLQS-SDTVVIYDPDPNPKN-----EEQAIARSHRIGQTKEVRVIHLEAVADAPRG 891 Query: 171 ------------------IAQNTIDELVL-QRLRTKSTIQDLLLNALK 199 + ++I+ LV + RTK + + +++A + Sbjct: 892 SVVPPNPAAVAAVAAGKRLYGDSIESLVRNEIQRTKIEMANEVIDAGR 939 >gi|159164912|gb|ABV80241.2| mutant required to maintain repression 1 [Zea mays] Length = 1435 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 23/175 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------- 87 + + E + V + +A +++ F L +++ Sbjct: 1202 PMLAKVRSNPYEGVKTRFVIEVVRLSEALREKVLIFSQFIQPLELIKEHLRKFFKWREGK 1261 Query: 88 ---FPQGRTLDK-DPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+ L + +I+ +N +L A +C G++L G + +V + W+ Sbjct: 1262 EILQMDGKILPRYRQASIEAFNNPNNDSRVLLASTRACCEGISLT-GASRIVLLDVVWNP 1320 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R ++R + G K+ V+ Y LI T + R K + L+ + Sbjct: 1321 A-----VGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1370 >gi|159164909|gb|ABV80238.2| required to maintain repression 1 [Zea mays] Length = 1435 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 23/175 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------- 87 + + E + V + +A +++ F L +++ Sbjct: 1202 PMLAKVRSNPYEGVKTRFVIEVVRLSEALREKVLIFSQFIQPLELIKEHLRKFFKWREGK 1261 Query: 88 ---FPQGRTLDK-DPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+ L + +I+ +N +L A +C G++L G + +V + W+ Sbjct: 1262 EILQMDGKILPRYRQASIEAFNNPNNDSRVLLASTRACCEGISLT-GASRIVLLDVVWNP 1320 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R ++R + G K+ V+ Y LI T + R K + L+ + Sbjct: 1321 A-----VGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1370 >gi|256269159|gb|EEU04491.1| Rad5p [Saccharomyces cerevisiae JAY291] Length = 1170 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 19/176 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + + +K LQL + + + I+EK + + F+ D Sbjct: 992 SKSSKITALLKELQL----LQDSSAGEQVVIFSQ-FSTYLDILEKE------LTHTFSKD 1040 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 +A++ K + ++ + +L + G GLNL + W Sbjct: 1041 VAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLT-CASHAYMMDPW 1099 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W +E + R + G +V V I Q++I+E +L+ K TI + + Sbjct: 1100 WSPS-----MEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1150 >gi|327356947|gb|EGE85804.1| DNA repair protein rad5 [Ajellomyces dermatitidis ATCC 18188] Length = 1199 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E +L + G GLNL N + WW Q I+R+ + G + V Sbjct: 1091 EPTPNVLLISLRAGGVGLNLTT-ANQVFMMDPWWSFATEAQAIDRV-----HRMGQLKDV 1144 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V I +++I+ +L+ K I L Sbjct: 1145 SVTRFIVKDSIEGRMLRIQERKMMIAGSL 1173 Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats. Identities = 15/138 (10%), Positives = 34/138 (24%), Gaps = 4/138 (2%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 ++ ++ Q V + E D I + + K + + F Sbjct: 806 SYTTIFAQILRLRQTCCHPVLTRNQTIVAEEEDAAIATDDANVFKDDMDLQDLIDRFTMT 865 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + Q T +++ G+ P+ P + + Sbjct: 866 TSSEDADSQQDPTNKFTTHALRQIQTETSGECPICTDEPMVDPAVTSCWHSACKKCLVDY 925 Query: 138 WWDLEEHQQMIERIGVTR 155 + + I R R Sbjct: 926 VEH-QRDKGQIPRCFSCR 942 >gi|296220828|ref|XP_002756502.1| PREDICTED: lymphoid-specific helicase isoform 4 [Callithrix jacchus] Length = 808 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 52/180 (28%), Gaps = 36/180 (20%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + ++ K L+ ++ + +++ Sbjct: 563 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVINSGKFLILDRMLPELKKRGHKVLLFSQ 622 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 S L L + ++ Y S Sbjct: 623 MTSMLDILMDYCH-----------------------LRNFNFSRLDGSMSYSERERNMHS 659 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 D E + + R + G + V VY L+ NTID+ +++R K ++ L+++ Sbjct: 660 FNTDPEVN-PQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIH 718 >gi|239613018|gb|EEQ90005.1| DNA repair protein rad5 [Ajellomyces dermatitidis ER-3] Length = 1194 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E +L + G GLNL N + WW Q I+R+ + G + V Sbjct: 1086 EPTPNVLLISLRAGGVGLNLTT-ANQVFMMDPWWSFATEAQAIDRV-----HRMGQLKDV 1139 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V I +++I+ +L+ K I L Sbjct: 1140 SVTRFIVKDSIEGRMLRIQERKMMIAGSL 1168 >gi|261189609|ref|XP_002621215.1| DNA repair protein rad5 [Ajellomyces dermatitidis SLH14081] gi|239591451|gb|EEQ74032.1| DNA repair protein rad5 [Ajellomyces dermatitidis SLH14081] Length = 1194 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E +L + G GLNL N + WW Q I+R+ + G + V Sbjct: 1086 EPTPNVLLISLRAGGVGLNLTT-ANQVFMMDPWWSFATEAQAIDRV-----HRMGQLKDV 1139 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V I +++I+ +L+ K I L Sbjct: 1140 SVTRFIVKDSIEGRMLRIQERKMMIAGSL 1168 Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats. Identities = 15/138 (10%), Positives = 34/138 (24%), Gaps = 4/138 (2%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 ++ ++ Q V + E D I + + K + + F Sbjct: 801 SYTTIFAQILRLRQTCCHPVLTRNQTIVAEEEDAAIATDDANVFKDDMDLQDLIDRFTMT 860 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + Q T +++ G+ P+ P + + Sbjct: 861 TSSEDADSQQDPTNKFTTHALRQIQTETSGECPICTDEPMVDPAVTSCWHSACKKCLVDY 920 Query: 138 WWDLEEHQQMIERIGVTR 155 + + I R R Sbjct: 921 VEH-QRDKGQIPRCFSCR 937 >gi|238570323|ref|XP_002386825.1| hypothetical protein MPER_14768 [Moniliophthora perniciosa FA553] gi|215439877|gb|EEB87755.1| hypothetical protein MPER_14768 [Moniliophthora perniciosa FA553] Length = 91 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+NL +I+V + W+ + + + R + G + V+V+ Sbjct: 4 IFLLTTRAGGLGINLTT-ADIVVLYDSDWNPQA-----DLQAMDRAHRIGQTKQVYVFRF 57 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I + +++E +L+R K + L++ + Sbjct: 58 ITEGSVEERMLERAAQKLRLDQLVIQQGR 86 >gi|239982028|ref|ZP_04704552.1| hypothetical protein SalbJ_21517 [Streptomyces albus J1074] gi|291453879|ref|ZP_06593269.1| helicase domain-containing protein [Streptomyces albus J1074] gi|291356828|gb|EFE83730.1| helicase domain-containing protein [Streptomyces albus J1074] Length = 608 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 70/232 (30%), Gaps = 39/232 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------- 52 + Y E + ++ L A E + E Sbjct: 344 EIYDALVGRYSARASAEREDFDALGKAMLRLLMAATSPALLGEAESRYEPLTYRVPPLRV 403 Query: 53 ------------------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF---- 88 K K I+ + +V F L +++ F Sbjct: 404 PASDSLFTLMRDLPSYELSPKYKEALKIVSENAAAGRKTLVWTTFVRSLTTMERLFATFE 463 Query: 89 ---PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G T D++ + + +L ++PA+ G G++L + V+ + Sbjct: 464 PAVVHGGTPDREEQIRRFRTDPDCMVLLSNPATLGEGISLHRDCHDAVYVDRDFMAGRFL 523 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q ++RI R V V L A+ TIDE+V RL K +L+ Sbjct: 524 QSLDRIHRLGLAPDAETR-VTV--LAAERTIDEVVALRLEQKLEFMGKILDD 572 >gi|159164914|gb|ABV80243.2| mutant required to maintain repression 1 [Zea mays] Length = 1435 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 23/175 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------- 87 + + E + V + +A +++ F L +++ Sbjct: 1202 PMLAKVRSNPYEGVKTRFVIEVVRLSEALREKVLIFSQFIQPLELIKEHLRKFFKWREGK 1261 Query: 88 ---FPQGRTLDK-DPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+ L + +I+ +N +L A +C G++L G + +V + W+ Sbjct: 1262 EILQMDGKILPRYRQASIEAFNNPNNDSRVLLASTRACCEGISLT-GASRIVLLDVVWNP 1320 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R ++R + G K+ V+ Y LI T + R K + L+ + Sbjct: 1321 A-----VGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1370 >gi|332024047|gb|EGI64265.1| Transcriptional regulator ATRX-like protein [Acromyrmex echinatior] Length = 2412 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 12/137 (8%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++ + + +F D + + P + L + G Sbjct: 1990 DTLDNHTGSWSLGLDYFRLDGQTSPENRNLWCKIFNRP------TNMRARLFLISTRAGG 2043 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G+NL N ++ F W+ Q I RI + G K+ +VY +A T++E + Sbjct: 2044 LGINLTA-ANRVIIFDASWNPSHDVQSIFRI-----YRFGQKKPCYVYRFLAAGTMEEKI 2097 Query: 181 LQRLRTKSTIQDLLLNA 197 R TK ++ +++ Sbjct: 2098 YNRQVTKLSLSCRVVDE 2114 >gi|311742523|ref|ZP_07716332.1| ATP-dependent RNA helicase [Aeromicrobium marinum DSM 15272] gi|311314151|gb|EFQ84059.1| ATP-dependent RNA helicase [Aeromicrobium marinum DSM 15272] Length = 710 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 6/126 (4%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 F R + + + ++ ++ G GLNL NI++ Sbjct: 567 FAKAGLRYASIRGNQTPSVRQQNIDAFVEDPDVAVVVCSLSAAGVGLNLHVASNIVLAEL 626 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W D E+ + R + G + V + +IA TID +++ + +K+ + L+ Sbjct: 627 SWTDAEQT------QAIDRVHRIGQEEPVTAWRIIAAQTIDTKIVELIDSKAGLAARALD 680 Query: 197 ALKKET 202 +E Sbjct: 681 GSDEEV 686 >gi|198430961|ref|XP_002124279.1| PREDICTED: similar to MGC115661 protein [Ciona intestinalis] Length = 831 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 61/200 (30%), Gaps = 29/200 (14%) Query: 7 FQRELYCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 ++ + + ++A K LQ N + + ++ Sbjct: 512 IKQRKLLEASQSAVNQKGLSAAEKHGILLQYFNETAKFKLPGIKS--------YVLDLL- 562 Query: 65 KANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLF 113 ++ H S L ++ + + + Sbjct: 563 -EGGHKFLLFAHHKSVLDSVETDLNKKGCDYIRIDGSTPSERRQTEVARFQENSSCKVAL 621 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G+ L +++VF L+W+ R + G + V V+YLIA+ Sbjct: 622 LSITAANMGITLHS-ASLVVFAELFWNPGILV-----QAEDRCYRIGQRDVVNVHYLIAK 675 Query: 174 NTIDELVLQRLRTKSTIQDL 193 NT D+L+ Q ++ K + Sbjct: 676 NTADDLIWQMIKKKLEVLSK 695 >gi|302658649|ref|XP_003021026.1| SNF2 family helicase/ATPase, putative [Trichophyton verrucosum HKI 0517] gi|291184901|gb|EFE40408.1| SNF2 family helicase/ATPase, putative [Trichophyton verrucosum HKI 0517] Length = 1932 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 68/193 (35%), Gaps = 10/193 (5%) Query: 8 QRELYCDLQGENIEAFNSASKT-VKCLQL--ANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + +++G+ S+ K + + + ++ DE IKA + I+ Sbjct: 1276 VEDDVLEIEGQTAITDEVVSQFEQKFKDIKDLDSPENSHRTQMVGQIVDESIKAGDKILI 1335 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPASCGHGL 123 + + + + G+T +++ + + + GL Sbjct: 1336 FSGYLHTLSYLGSMLEARGHKYCRLDGKTPIATRQAATRDFTDSDAHVYLISTKAGALGL 1395 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 N+ G N ++ F ++ E + R + G + VFVY + T +EL+ ++ Sbjct: 1396 NI-IGANRVIIFESEYNPT-----WEEQAIGRAYRLGQTKDVFVYRFVMGGTFEELIHEK 1449 Query: 184 LRTKSTIQDLLLN 196 K + ++ Sbjct: 1450 GVFKKNMALRAID 1462 >gi|329767794|ref|ZP_08259310.1| hypothetical protein HMPREF0428_01007 [Gemella haemolysans M341] gi|328838895|gb|EGF88489.1| hypothetical protein HMPREF0428_01007 [Gemella haemolysans M341] Length = 321 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 27/203 (13%) Query: 2 KQYHKFQRELYCDLQGE-----NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K Y +F++ + + + + + QLA+ +H+E Sbjct: 132 KHYKEFEKHAVVEFKSKLFGEVEYVGDTQLKERLFLRQLAS-------------IHNENK 178 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL---DKDPCTIQEWNEGKIPLLF 113 K I + +I+ Y+FN + ++ P+ R + + + + +N + Sbjct: 179 KEKLKDIINSTEGRLIIFYNFNHEKEAIKSCIPKDRPISYVNGELVDKENYNNADNSITL 238 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G N+Q N L+F+S E++ Q I+RI + G ++ F Y L+ Q Sbjct: 239 MQYQAGAKGHNMQK-ANHLIFYSPTEKCEDYMQSIKRI-----HRIGQEKPCFYYKLVVQ 292 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 N+I+E + + L + L N Sbjct: 293 NSIEEDIYKALERGEDYTNELFN 315 >gi|125552219|gb|EAY97928.1| hypothetical protein OsI_19844 [Oryza sativa Indica Group] Length = 1367 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 23/175 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------- 87 + + E + V + +A +++ F L +++ Sbjct: 1132 PMLERLRSNPYEGVKTRFVMEVVRLCEALKEKVLIFSQFIQPLELIKEHLRKIFKWREGK 1191 Query: 88 ---FPQGRTLDK-DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+ L + +I+ +N +L A +C G++L G + +V + W+ Sbjct: 1192 EILQMDGKILPRYRQNSIEVFNNPDSDARVLLASTRACCEGISLT-GASRVVLLDVVWNP 1250 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R ++R + G K+ V+ Y LI T + R K + L+ + Sbjct: 1251 A-----VGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1300 >gi|312075594|ref|XP_003140486.1| hypothetical protein LOAG_04901 [Loa loa] gi|307764349|gb|EFO23583.1| hypothetical protein LOAG_04901 [Loa loa] Length = 698 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 64/202 (31%), Gaps = 21/202 (10%) Query: 5 HKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 +L D + IE ++K +L Y + + +L I+ Sbjct: 469 KALTEKLLDDDGNKQIEQLFEKNFLSMKLKKLFEHMDYALSCGDKCVIVSQ-WTSLLNIL 527 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGH 121 E I+ + +N + ++ G Sbjct: 528 EHHLRRKEILYTS-----------INGKVSSSDRQSRANSFNKIDSGPRVMLLSLT-AGG 575 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GGN L L W+ QQ +RI + G + VF++ L+ TI+E VL Sbjct: 576 VGLNLVGGNHLFLVDLHWNPALEQQACDRI-----YRIGQTKNVFIHKLVCLETIEERVL 630 Query: 182 QRLRTKSTIQDLLLNALKKETI 203 R K T+ +L + + + Sbjct: 631 ALQRIKQTLAKDVLEGVASKKL 652 >gi|255320269|ref|ZP_05361454.1| Non-specific serine/threonine protein kinase [Acinetobacter radioresistens SK82] gi|255302708|gb|EET81940.1| Non-specific serine/threonine protein kinase [Acinetobacter radioresistens SK82] Length = 1067 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 68/229 (29%), Gaps = 36/229 (15%) Query: 7 FQRELYCDL------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 QR LY D+ E + + E Sbjct: 844 LQRHLYADVINRYRRLSEEGNQGAMLASLHSMRMICAHPFQLQPNASIYESPKVDWLIKT 903 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA----------------FPQGRTLDKDPCTIQEW 104 + + K +I+ F L++ + I ++ Sbjct: 904 LEVIKTKNEKVIIFTEFRDIQVFLKRILLERFGLNVTTVNGDSNTSSKKGLTRQNLIDKF 963 Query: 105 NE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 ++ + G G+N+Q N ++ ++ W+ + E R + G + Sbjct: 964 QATSGFNVIILSTTAVGFGVNIQK-ANHVIHYTRSWNPAK-----EDQATDRAYRIGQDK 1017 Query: 164 AVFVYYLIAQ----NTIDELVLQRLRTKSTIQDLLLN---ALKKETIHV 205 VFVYY +T + + + L +K + D +L L KE I + Sbjct: 1018 EVFVYYPSIAANDFDTFEIKLDRLLSSKRALADDMLQPSRELSKELIEM 1066 >gi|21432058|gb|AAH32964.1| 0610007P08Rik protein [Mus musculus] Length = 394 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 202 KMKVLQQLLNHFRKQRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 246 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N+++ F W+ Sbjct: 247 LDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNF-VGANVVILFDPTWNPAN--- 302 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + V R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 303 --DLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQLHCVVVGSENAK 355 >gi|195387391|ref|XP_002052379.1| GJ22014 [Drosophila virilis] gi|194148836|gb|EDW64534.1| GJ22014 [Drosophila virilis] Length = 267 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 60/154 (38%), Gaps = 12/154 (7%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN- 105 + E +KI + ++E ++ + N + + I+ +N Sbjct: 34 NVVEYFFKKITESDELLEDIPSSYKVSNTWIN---GQDYYRLDGKTPKNIRHEMIKRFNS 90 Query: 106 --EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + G G+NL G N ++ W+ QQ I RI + G K+ Sbjct: 91 EANRRARVFLISAKAGGQGINL-IGANRVIILDTSWNPSNDQQNIFRI-----FRLGQKK 144 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++Y LIA T++E V R TK + +++ Sbjct: 145 NCYIYRLIAMGTMEEKVYSRSVTKQAMSFRVVDE 178 >gi|259148021|emb|CAY81270.1| Rad5p [Saccharomyces cerevisiae EC1118] Length = 1169 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 19/176 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + + +K LQL + + + I+EK + + F+ D Sbjct: 991 SKSSKITALLKELQL----LQDSSAGEQVVIFSQ-FSTYLDILEKE------LTHTFSKD 1039 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 +A++ K + ++ + +L + G GLNL + W Sbjct: 1040 VAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLT-CASHAYMMDPW 1098 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W +E + R + G +V V I Q++I+E +L+ K TI + + Sbjct: 1099 WSPS-----MEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1149 >gi|229543866|ref|ZP_04432925.1| SNF2-related protein [Bacillus coagulans 36D1] gi|229325005|gb|EEN90681.1| SNF2-related protein [Bacillus coagulans 36D1] Length = 567 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 8/139 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A + F F G K Q + +L A + G Sbjct: 376 IIFTEYRATQLYLQWFLKQHGISSVPFRGGFKRGKKDWMRQLFEN-HAQVLIAT-EAGGE 433 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ + ++ F L W+ +Q I R+ + G ++ V +Y +NT++E +L Sbjct: 434 GINLQF-CHHMINFDLPWNPMRLEQRIGRV-----HRLGQEKDVHIYNFATKNTVEEHIL 487 Query: 182 QRLRTKSTIQDLLLNALKK 200 + L K + + ++ L + Sbjct: 488 KLLYEKIHLFERVIGELDE 506 >gi|170039496|ref|XP_001847569.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167863046|gb|EDS26429.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 959 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 9/126 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDP---CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + + + + E ++ + G GLNL G N L+ Sbjct: 823 YKEEEEAFMYWWCKTPLGRRRSKQMEMEHEARMEIENIMLLSLTAGGVGLNL-VGANHLM 881 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 L W+ + E R + G K+ V+++ + +T+++ ++ + K + Sbjct: 882 LLDLHWNPQL-----EAQAQDRVYRVGQKKPVYIWKFMCTDTVEQKIMGLQQKKLDLATQ 936 Query: 194 LLNALK 199 L K Sbjct: 937 ALTGTK 942 >gi|323347520|gb|EGA81788.1| Rad5p [Saccharomyces cerevisiae Lalvin QA23] Length = 1169 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 19/176 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + + +K LQL + + + I+EK + + F+ D Sbjct: 991 SKSSKITALLKELQL----LQDSSAGEQVVIFSQ-FSTYLDILEKE------LTHTFSKD 1039 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 +A++ K + ++ + +L + G GLNL + W Sbjct: 1040 VAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLT-CASHAYMMDPW 1098 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W +E + R + G +V V I Q++I+E +L+ K TI + + Sbjct: 1099 WSPS-----MEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1149 >gi|312377807|gb|EFR24547.1| hypothetical protein AND_10782 [Anopheles darlingi] Length = 866 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 48/122 (39%), Gaps = 9/122 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILV 133 + + + + + +++ +E + ++ + G GLNL G N L Sbjct: 730 YKEEEEAFLYWWCKTPLGRRRSKQLEKDHEAMMEMENIMLLSLTAGGVGLNL-VGANHLF 788 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 W+ + E R + G + V+++ I Q T+++ +L + K I D Sbjct: 789 LLDPHWNPQL-----EAQAQDRIYRVGQTKPVYIWKFICQETVEQKILALQQHKLEIADG 843 Query: 194 LL 195 +L Sbjct: 844 VL 845 >gi|154302115|ref|XP_001551468.1| hypothetical protein BC1G_09738 [Botryotinia fuckeliana B05.10] gi|150855512|gb|EDN30704.1| hypothetical protein BC1G_09738 [Botryotinia fuckeliana B05.10] Length = 1176 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 6/107 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + I ++ A+ G GLNL N + ++ Q I+R+ Sbjct: 1057 RSMAMENFREDPSIVVILVSIAAGGLGLNLTT-ANKVYVMEPQFNPAAEAQAIDRV---- 1111 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G KR V I + +E +LQ K + L +++ K Sbjct: 1112 -HRLGQKREVQTVRFIMNKSFEEKMLQIQDKKQKLASLSMDSQKGRL 1157 >gi|123427014|ref|XP_001307162.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121888775|gb|EAX94232.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1535 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 54/192 (28%), Gaps = 32/192 (16%) Query: 32 CLQLANGAVYY------------DEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYH- 76 ++ N E K + L++I+ K +++ Sbjct: 732 LHRICNHPFMVEGSEEYYTAILGMERSKALVETCCKFQFLDLILPIFKKQNRSVLIFSQR 791 Query: 77 ---------FNSDLARLQKAFPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNL 125 + + D I + + + + S GLNL Sbjct: 792 IKVLQLLAEYCQLRKYTYVMLDGQLSADDKKTAIDSFVSDNSDVFIFLISTKSGAEGLNL 851 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 ++ + F W+ + + R + G + V V LI T + + R + Sbjct: 852 TK-ASVTIIFDPDWNP-----NNDLQALGRCHRIGQTKRVLVLRLITFGTYEHTMYTRAQ 905 Query: 186 TKSTIQDLLLNA 197 K + D +L Sbjct: 906 KKLKLWDAVLGD 917 >gi|46111685|ref|XP_382900.1| hypothetical protein FG02724.1 [Gibberella zeae PH-1] gi|85540718|sp|Q4IJ84|RAD5_GIBZE RecName: Full=DNA repair protein RAD5 Length = 1154 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 19/163 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWN 105 + L + + +V F S L+ ++ + E+ Sbjct: 990 MSELRALRREHPKMKSVVFSQFTSFLSLIEPALTRANIKFLRLDGSMAQKARAAVLNEFT 1049 Query: 106 EGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 E K +L + G GLNL + WW +E + R + G + Sbjct: 1050 EKKGFTILLLSLRAGGVGLNLTS-AGRVFMMDPWWSFA-----VEAQAIDRVHRMGQEAE 1103 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDL--LLNALKKETIHV 205 V V + + +++E +L+ K I ++N +K+ + Sbjct: 1104 VQVKRFVVKESVEERMLKVQERKKFIATSLGMMNDEEKKLQRI 1146 >gi|297834548|ref|XP_002885156.1| hypothetical protein ARALYDRAFT_318431 [Arabidopsis lyrata subsp. lyrata] gi|297330996|gb|EFH61415.1| hypothetical protein ARALYDRAFT_318431 [Arabidopsis lyrata subsp. lyrata] Length = 630 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 53/160 (33%), Gaps = 8/160 (5%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 V + E ++D + + ++ + + LQ QG Sbjct: 445 HDVVFTESAVRSCINDYDDPQDKNALVMLQGD--FISSKIKAVIELLQSLAQQGSPDTPP 502 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 TI + ++ + GLN+ + ++ LWW+ E + R Sbjct: 503 IKTIVFSQWTDVQVMLMSLKAGNLGLNMVAACH-VILLDLWWNPTT-----EDQAIDRAH 556 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G R V V + +NT++E +L K I L Sbjct: 557 RIGQTRTVTVTRIAIKNTVEERILTLQERKRNIVASALGE 596 >gi|156932814|ref|YP_001436730.1| hypothetical protein ESA_00610 [Cronobacter sakazakii ATCC BAA-894] gi|156531068|gb|ABU75894.1| hypothetical protein ESA_00610 [Cronobacter sakazakii ATCC BAA-894] Length = 1080 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 65/211 (30%), Gaps = 31/211 (14%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 ++ + K + D H+++ + K+ L + + A Sbjct: 859 QQQQAFSEEMQQAGTGMLGLLHKLKLICAHPAVVDPAPHFRD-NSPKLNWLLKKLAEIKA 917 Query: 69 APIIVAYHFNS--DLARLQKAFPQGRTLDK-----------------DPCTIQEWNE-GK 108 F DL R + + + I + Sbjct: 918 TTKDKVIIFTELRDLQRELQHAIYQKFGFRPVIINGDTSTKSHSQNSRQRLIDNFQSQPG 977 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 ++ + G G+N+Q N ++ F+ W+ + E R + G + V+VY Sbjct: 978 FGIIILSTVAVGFGVNVQK-ANHVIHFTRCWNPAK-----EDQATDRAYRIGQTKDVYVY 1031 Query: 169 YLIAQN----TIDELVLQRLRTKSTIQDLLL 195 Y ++ T + + + L+ + + +L Sbjct: 1032 YPTVRDPEITTFEVTLDELLKRRRALAKDML 1062 >gi|302753908|ref|XP_002960378.1| hypothetical protein SELMODRAFT_73550 [Selaginella moellendorffii] gi|300171317|gb|EFJ37917.1| hypothetical protein SELMODRAFT_73550 [Selaginella moellendorffii] Length = 159 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 47/149 (31%), Gaps = 20/149 (13%) Query: 64 EKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEW-NEGKIPLL 112 ++ + S L ++ + K I+ + + + ++ Sbjct: 1 MTPRGEKSLIFSQWTSMLNLIEPELEGAGIQFSRIDGSMSAGKRVAAIKRFSEDPDVVVM 60 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + + + + ++ +WW+ E + R + G R V V + Sbjct: 61 LISLRAGLNLV----AASHVLLMDMWWNPTT-----EDQAIDRTHRIGQTRPVHVTRFVV 111 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + T+ E VL+ K + + + E Sbjct: 112 KQTVQEHVLEIQEKKKKLVEFVFGEKSSE 140 >gi|298376514|ref|ZP_06986469.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides sp. 3_1_19] gi|298266392|gb|EFI08050.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides sp. 3_1_19] Length = 563 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 74/205 (36%), Gaps = 21/205 (10%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y +R+L L+ K++K G V K++ + Sbjct: 348 KEYQDAERDLVDYLRRYKEADDEKVQKSLK------GEVMVRIGILKDITARGKLREVID 401 Query: 62 II--EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ-------EWNEGKIPLL 112 + + N II+ + + + RL +AFP + Q K ++ Sbjct: 402 FVKDFRENGKKIILFCNLHEIVDRLLQAFPSAVCVTGRQDMQQKQAAIDAFQRNPKTDVI 461 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G+ L N + F L W + +R + G K +V YYL+ Sbjct: 462 ICSIKAAAAGITLTASSN-VAFIELPWTYADCD-----QAESRAHRIGQKDSVNCYYLLG 515 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 + TID+ + + + K I + +L A Sbjct: 516 RKTIDQKLYRIIEEKKHISNAVLGA 540 >gi|190406072|gb|EDV09339.1| DNA repair protein RAD5 [Saccharomyces cerevisiae RM11-1a] Length = 1169 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 19/176 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + + +K LQL + + + I+EK + + F+ D Sbjct: 991 SKSSKITALLKELQL----LQDSSAGEQVVIFSQ-FSTYLDILEKE------LTHTFSKD 1039 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 +A++ K + ++ + +L + G GLNL + W Sbjct: 1040 VAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLT-CASHAYMMDPW 1098 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W +E + R + G +V V I Q++I+E +L+ K TI + + Sbjct: 1099 WSPS-----MEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1149 >gi|241560242|ref|XP_002400839.1| DNA repair and recombination protein RAD54B, putative [Ixodes scapularis] gi|215499788|gb|EEC09282.1| DNA repair and recombination protein RAD54B, putative [Ixodes scapularis] Length = 614 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 65/188 (34%), Gaps = 21/188 (11%) Query: 32 CLQLANGAVYYDEEKHWKEV--HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA 87 L + + ++ K + L+ ++ +++ F L L+ Sbjct: 419 LHTLCTKYQSLRDYRLEDDLIMDSGKFRELDSVLSDSLKKNHRVLIFSQFTMVLDILEAY 478 Query: 88 FPQ----------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++ I ++N + I + G G+NL N++V Sbjct: 479 LNIRGHKWLRLDGATSVTDRQDLIDKYNGDSSILAFLLSTRAGGQGINL-ASANVVVLHD 537 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++ ++ R + G R VFV ++++TI+E +L + K ++ + Sbjct: 538 VDFNP-----YNDKQAEDRCHRLGQSRDVFVIKFVSKDTIEEGILAIAKEKLKLEKDITE 592 Query: 197 ALKKETIH 204 E + Sbjct: 593 ETVNEDMD 600 >gi|149915099|ref|ZP_01903627.1| helicase/SNF2 family domain protein [Roseobacter sp. AzwK-3b] gi|149810820|gb|EDM70659.1| helicase/SNF2 family domain protein [Roseobacter sp. AzwK-3b] Length = 871 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 69/202 (34%), Gaps = 11/202 (5%) Query: 1 MKQYHKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 M + +R + +L + +K K + L + +E + + + Sbjct: 414 MLMQDEIERLDEILELADKVESE----TKVTKLVDLIETRLAPEEPVLFFTEYKATQALV 469 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +E+ + + + L + +++N G+ + Sbjct: 470 HKTLEEKFGKGCVGFINGDERLVVSGPNDQETILQYPRDKAAEDFNGGRTR-FLISTEAG 528 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G++LQ LV L W+ Q + R+ + G KRAV VY + T++ Sbjct: 529 GEGIDLQDRCATLVHVDLPWNPMRLHQRVGRL-----NRYGQKRAVQVYLMRNPETVEAR 583 Query: 180 VLQRLRTKSTIQDLLLNALKKE 201 + L K L+A +E Sbjct: 584 IWALLEEKLGRIQAALSASMEE 605 >gi|149182929|ref|ZP_01861387.1| DNA/RNA helicase (SNF2 family) protein [Bacillus sp. SG-1] gi|148849378|gb|EDL63570.1| DNA/RNA helicase (SNF2 family) protein [Bacillus sp. SG-1] Length = 565 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A + F F G K + + +L A + G Sbjct: 376 IIFTEYRATQLYLQWFLKQNGITSVPFRGGFKRGKKDWMRELFKN-HAQVLIAT-EAGGE 433 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ + ++ F L W+ +Q I R+ + G V +Y ++T++E +L Sbjct: 434 GINLQF-CHHIINFDLPWNPMRLEQRIGRV-----HRLGQTEDVHIYNFATRDTVEEHIL 487 Query: 182 QRLRTKSTIQDLLLNAL 198 + L K ++ + ++ L Sbjct: 488 KLLYEKISLFEKVIGQL 504 >gi|119478779|ref|XP_001259438.1| DNA excision repair protein (Rad5), putative [Neosartorya fischeri NRRL 181] gi|119407592|gb|EAW17541.1| DNA excision repair protein (Rad5), putative [Neosartorya fischeri NRRL 181] Length = 1245 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL + + WW IE + R + G R V V Sbjct: 1142 VLLISLRAGGVGLNLTA-ASNVFMMDPWWSFA-----IEAQAIDRVHRMGQLRDVSVTRF 1195 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 I +++I+ +L+ K I L Sbjct: 1196 IVKDSIEGRMLRVQERKMNIAGSL 1219 >gi|85540717|sp|Q4WVM1|RAD5_ASPFU RecName: Full=DNA repair protein rad5 Length = 1245 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL + + WW IE + R + G R V V Sbjct: 1142 VLLISLRAGGVGLNLTA-ASNVFMMDPWWSFA-----IEAQAIDRVHRMGQLRDVSVTRF 1195 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 I +++I+ +L+ K I L Sbjct: 1196 IVKDSIEGRMLRVQERKMNIAGSL 1219 >gi|70997286|ref|XP_753393.1| DNA excision repair protein (Rad5) [Aspergillus fumigatus Af293] gi|66851029|gb|EAL91355.1| DNA excision repair protein (Rad5), putative [Aspergillus fumigatus Af293] gi|159126880|gb|EDP51996.1| DNA excision repair protein (Rad5), putative [Aspergillus fumigatus A1163] Length = 1301 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL + + WW IE + R + G R V V Sbjct: 1198 VLLISLRAGGVGLNLTA-ASNVFMMDPWWSFA-----IEAQAIDRVHRMGQLRDVSVTRF 1251 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 I +++I+ +L+ K I L Sbjct: 1252 IVKDSIEGRMLRVQERKMNIAGSL 1275 >gi|114631885|ref|XP_001150802.1| PREDICTED: helicase, lymphoid-specific isoform 3 [Pan troglodytes] Length = 813 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 24/183 (13%), Positives = 55/183 (30%), Gaps = 38/183 (20%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 564 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 623 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 S L L ++++N ++ Y S Sbjct: 624 MTSMLDILMDYCH-----------LRDFN------------FSRLDGSMSYSEREKNMHS 660 Query: 137 LWWDLEEHQQMI---ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 D E + + R + G + V VY L+ NTID+ +++R K ++ L Sbjct: 661 FNTDPEVFIFLNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKL 720 Query: 194 LLN 196 +++ Sbjct: 721 IIH 723 >gi|268535648|ref|XP_002632959.1| C. briggsae CBR-RAD-26 protein [Caenorhabditis briggsae] Length = 1382 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 50/144 (34%), Gaps = 8/144 (5%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-DKDPCTIQEWN-EGKIPLLF 113 + LE I+ K + H G T I +N E + L Sbjct: 915 LDMLEEILRKRQVVKKEKSEHQERWEKNRNYLRLDGTTSGADREKLINRFNSEPGLHLFL 974 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G+NL N + W+ + V R + G ++ FVY LI Sbjct: 975 ISTRAGSLGINLVS-ANRCIIIDACWNP-----CHDAQAVCRVYRYGQQKKTFVYRLIMD 1028 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 N+++ + R +K +Q +++ Sbjct: 1029 NSMERSIFNRQISKHGLQQRVVDD 1052 >gi|119498439|ref|XP_001265977.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] gi|119414141|gb|EAW24080.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] Length = 1777 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 10/156 (6%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-DPCTIQEWNE-GK 108 + E IKA + ++ +++ P + +++ G+T + +N + Sbjct: 1398 IISESIKAGDKVLVFSHSIPTLDYVEHVLKISKRSYRRLDGKTPISTRQAATKSFNTVSE 1457 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + G GLN+ G N +V F ++ + E V R + G ++ VFVY Sbjct: 1458 EKVYLISTRAGGLGLNI-PGANRVVIFDFSFNP-----IWEEQAVGRAYRLGQQKPVFVY 1511 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 IA T +E++ + K+ + +++ KK I Sbjct: 1512 RFIAGGTFEEIIYNKAIFKTQLAVRVVD--KKNPIR 1545 >gi|6323060|ref|NP_013132.1| Rad5p [Saccharomyces cerevisiae S288c] gi|417587|sp|P32849|RAD5_YEAST RecName: Full=DNA repair protein RAD5; AltName: Full=Radiation sensitivity protein 5; AltName: Full=Revertibility protein 2 gi|172347|gb|AAA34951.1| RAD5 protein [Saccharomyces cerevisiae] gi|1360348|emb|CAA97556.1| RAD5 [Saccharomyces cerevisiae] gi|285813454|tpg|DAA09350.1| TPA: Rad5p [Saccharomyces cerevisiae S288c] Length = 1169 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 19/176 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + + +K LQL + + + I+EK + + F+ D Sbjct: 991 SKSSKITALLKELQL----LQDSSAGEQVVIFSQ-FSTYLDILEKE------LTHTFSKD 1039 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 +A++ K + ++ + +L + G GLNL + W Sbjct: 1040 VAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLT-CASHAYMMDPW 1098 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W +E + R + G +V V I Q++I+E +L+ K TI + + Sbjct: 1099 WSPS-----MEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1149 >gi|240274021|gb|EER37539.1| DNA repair and recombination protein RAD5B [Ajellomyces capsulatus H143] Length = 294 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 20/163 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKA-----------F 88 +E E KI+AL I+ +A +V + S L ++ Sbjct: 111 NEIDINPETTSSKIQALLKILTAKGQAPNTKTVVFSQWVSFLDIVEPQLVRNGITFARID 170 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + +D N+ +L A C GLNL N ++ WW I Sbjct: 171 GKMSSAKRDAAMNALSNDSNCTVLLASLNVCSVGLNLVA-ANQVILADSWWAPA-----I 224 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 E V R + G KR ++ L+ +N+I++ VL + + K T+ Sbjct: 225 EDQAVDRVYRLGQKRPTTIWRLVMENSIEDRVLDKQKEKRTLM 267 >gi|329849600|ref|ZP_08264446.1| SNF2 family N-terminal domain protein [Asticcacaulis biprosthecum C19] gi|328841511|gb|EGF91081.1| SNF2 family N-terminal domain protein [Asticcacaulis biprosthecum C19] Length = 1164 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 63/232 (27%), Gaps = 38/232 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALE 60 Y R +G + ++ DE ++ Sbjct: 670 AYEDLIRRAMA-GRGTMGKNDGMLQTLHAMRSVSLHPYRPDESDSDDTYVAQSARLLWTM 728 Query: 61 VIIEKANAAP-----------------IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE 103 I+E A ++ F L G K ++ Sbjct: 729 DILEAVKAKKEKALIFVESLDMQACLARMIQTRFR--LHAPPSRIHGGVPGAKRQDLVEV 786 Query: 104 WNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + ++ P + G GL L N ++ S WW+ +E R + G Sbjct: 787 FQARADCFDVMILSPKAGGVGLTLTA-ANHVIHLSRWWNPA-----VEDQSTDRVYRIGQ 840 Query: 162 KRAVFVYYLIA--------QNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R V VY +A ++ D + L K + +L A + + + Sbjct: 841 TRPVQVYLPMAVHPDPVIGPSSFDIKLNDLLSRKRALSRDMLVAPEGDETDI 892 >gi|315648445|ref|ZP_07901544.1| SNF2-related protein [Paenibacillus vortex V453] gi|315276139|gb|EFU39485.1| SNF2-related protein [Paenibacillus vortex V453] Length = 585 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 64/156 (41%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQ 102 + K + +I++ N +IV + D + + G K + Sbjct: 376 NTKAEKTIELIQQMN-EKVIVFTEYRATQEYLLNYFRDHGLVSVPYRGGMNRGKKDWMMD 434 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + GK ++ A + G G+NLQ+ + +V F L W+ +Q I R+ + G Sbjct: 435 LFR-GKAQVMIAT-EAGGEGINLQF-CHHMVNFDLPWNPMRVEQRIGRV-----HRLGQT 486 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V ++ L TI+E +L L K + ++++ L Sbjct: 487 NDVQIFNLSTSGTIEEHILNLLHEKINMFEMVIGGL 522 >gi|323332493|gb|EGA73901.1| Rad5p [Saccharomyces cerevisiae AWRI796] Length = 1169 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 19/176 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + + +K LQL + + + I+EK + + F+ D Sbjct: 991 SKSSKITALLKELQL----LQDSSAGEQVVIFSQ-FSTYLDILEKE------LTHTFSKD 1039 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 +A++ K + ++ + +L + G GLNL + W Sbjct: 1040 VAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLT-CASHAYMMDPW 1098 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W +E + R + G +V V I Q++I+E +L+ K TI + + Sbjct: 1099 WSPS-----MEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1149 >gi|310800231|gb|EFQ35124.1| WD domain-containing protein [Glomerella graminicola M1.001] Length = 1215 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 93 TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ + N+ I +L + GLNL + W+ Sbjct: 631 PHKERQRVVERFRNDPSIRVLLLTLSCGAVGLNLTA-ASRAYLMEPNWNPTLQD-----Q 684 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G + V +++ +E+V++ + K + +LL Sbjct: 685 ALARIHRMGQENEVTTIQFYIRDSFEEVVVKNQKLKRELAGILL 728 >gi|327263495|ref|XP_003216555.1| PREDICTED: putative DNA repair and recombination protein RAD26-like [Anolis carolinensis] Length = 756 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 64/165 (38%), Gaps = 19/165 (11%) Query: 50 EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---------- 97 + K+K L+ ++ N +++ L L++ + Sbjct: 493 PKYSGKMKVLQKLLNHFRKNKDKVLLFSFSTKLLDVLEQYCMASGLDYRRLDGNTKAEDR 552 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++E+N ++ + + G GLN G NI++ F W+ + + R Sbjct: 553 VKIVKEFNGMEEVNICLVSTMAGGLGLNF-VGANIVILFDPTWNPAN-----DLQAIDRA 606 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G R V V+ LI+ T++E++ R K + +++ + + Sbjct: 607 YRIGQCRDVKVFRLISLGTVEEMMYLRQVYKQQLHCVVVGSENAK 651 >gi|242063742|ref|XP_002453160.1| hypothetical protein SORBIDRAFT_04g001010 [Sorghum bicolor] gi|241932991|gb|EES06136.1| hypothetical protein SORBIDRAFT_04g001010 [Sorghum bicolor] Length = 2166 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 69/223 (30%), Gaps = 57/223 (25%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVH----DEKIKALEVIIEKAN--AAPIIVAYHFNSDL 81 K ++ ++ N + + + K+ L+ I+ K + +++ L Sbjct: 1261 KCMELRKVCNHPLLTYPFLNHGKDFMIRSCGKLWNLDRILIKLHKAGHRVLLFSTMTKLL 1320 Query: 82 ARLQKAFPQGRTLDKD----------PCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGG 129 ++ R + + I ++N + + G GLNLQ Sbjct: 1321 DIMEDYLQWRRLVYRRIDGTTSLEDRESAIVDFNRPGSDCFIFLLSIRAAGRGLNLQS-A 1379 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ---------------- 173 + +V + + + E V R + G R V V Y+ A Sbjct: 1380 DTVVIYDPDPNPQN-----EEQAVARAHRIGQTREVKVIYMEAVVDNISSYQKEDELRNG 1434 Query: 174 ----------------NTIDELVL-QRLRTKSTIQDLLLNALK 199 +I+ L+ + K + D ++NA + Sbjct: 1435 GSADLEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGR 1477 >gi|311069060|ref|YP_003973983.1| putative RNA polymerase-associated helicase protein [Bacillus atrophaeus 1942] gi|310869577|gb|ADP33052.1| putative RNA polymerase-associated helicase protein [Bacillus atrophaeus 1942] Length = 556 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 8/156 (5%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 K + V K +VII A I F F G K Sbjct: 357 QNSKAIQVVDLIKKIDDKVIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKD 416 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + GK+ +L A + G G+NLQ+ N ++ + L W+ +Q I RI + G + Sbjct: 417 LFR-GKVQVLIAT-EAGGEGINLQF-CNNIINYDLPWNPMRLEQRIGRI-----HRLGQE 468 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R V +Y + ++T++E +L+ L K + + ++ L Sbjct: 469 RDVHIYNMATKHTVEEHILKLLYEKIHLFEKVVGEL 504 >gi|327303684|ref|XP_003236534.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] gi|326461876|gb|EGD87329.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] Length = 1167 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 8/115 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +L + +I+ + + + +L + G GLNL G+++ ++ Q ++R Sbjct: 1047 MSLKQRNASIETFSTDDNVTILLVTIGAGGVGLNLTA-GSMVYIMEPQYNPAAIAQAVDR 1105 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETIH 204 + + G R V I ++I+E + + + K + D+ LN + + + Sbjct: 1106 V-----HRIGQTREVTTIQFIMNDSIEEKITELAKRKQKLADMSLNRKMDRRELQ 1155 >gi|310800485|gb|EFQ35378.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1015 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 18/164 (10%) Query: 41 YYDEEKHWKEVHDEKIKA-LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG-------- 91 DE +E + K+ A + + E IV + L + + Sbjct: 853 KDDELYFNQEGYSTKMDALIRDVKEDVWTTKSIVFSCWTRTLHLVGMHLERAGVRFAMID 912 Query: 92 --RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 L + ++ + + + +L + GLNL N + L W+ + Sbjct: 913 GNCPLSERQKILERFAKDDDLRVLIMTTGTGAFGLNLT-CANRVFIVELQWNPS-----V 966 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 E + R + G + V V + + T++E + + K + Sbjct: 967 ENQAIARAIRFGQDQKVLVTRYVTKATVEEEMRSQQIVKKNLAA 1010 >gi|302509082|ref|XP_003016501.1| hypothetical protein ARB_04790 [Arthroderma benhamiae CBS 112371] gi|291180071|gb|EFE35856.1| hypothetical protein ARB_04790 [Arthroderma benhamiae CBS 112371] Length = 1187 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 8/115 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +L + +I+ + + + +L + G GLNL G+++ ++ Q ++R Sbjct: 1067 MSLKQRNASIETFSTDDNVTILLVTIGAGGVGLNLTA-GSMVYIMEPQYNPAAIAQAVDR 1125 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETIH 204 + + G R V I ++I+E + + + K + D+ LN + + + Sbjct: 1126 V-----HRIGQTREVTTIQFIMNDSIEEKITELAKRKQKLADMSLNRKMDRRELQ 1175 >gi|290980595|ref|XP_002673017.1| lar to transcriptional regulator ATRX (X-linked helicase II) [Naegleria gruberi] gi|284086598|gb|EFC40273.1| lar to transcriptional regulator ATRX (X-linked helicase II) [Naegleria gruberi] Length = 1366 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 63/201 (31%), Gaps = 42/201 (20%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 V ++ K + K++ L IIEK N I+V + L ++ F + Sbjct: 811 PVLANDYKLHNARNSPKMEFLLRIIEKCYLNNEKILVFTQYVEMLDVMEAVFKHTPIVVG 870 Query: 97 ---------------------------------DPCTIQEW-NEGKIPLLFAHPASCGHG 122 + + E + + G G Sbjct: 871 TEEDEDNQTVPIRKTLSKGDDYLRMDGSISGRARQDLVDSFTEESTAHVFIISTKAGGLG 930 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NL +V F W+ ++ + R + G K+ V+VY + + +E + Sbjct: 931 INL-IAATRVVIFDPCWN-----DTWDKQALFRAYRYGQKKPVYVYRFVTYGSAEEKIFN 984 Query: 183 RLRTKSTIQDLLLNALKKETI 203 K+ + +++ + I Sbjct: 985 LSTAKAWLAKRIVDDKTPDLI 1005 >gi|242087829|ref|XP_002439747.1| hypothetical protein SORBIDRAFT_09g019410 [Sorghum bicolor] gi|241945032|gb|EES18177.1| hypothetical protein SORBIDRAFT_09g019410 [Sorghum bicolor] Length = 1535 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 62/161 (38%), Gaps = 25/161 (15%) Query: 55 KIKALEVI--IEKANAAPIIVAYHFNSDLARLQKA--------------FPQGRTLDK-D 97 K + + + + +A +++ + L +++ G+ L + Sbjct: 1316 KTRFVMEVVRLCEALREKVLIFSQYIQPLELIKEHLRKFFKWREGKEILQMDGKILPRYR 1375 Query: 98 PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +I+ +N +L A +C G++L G + +V + W+ + R ++R Sbjct: 1376 QASIEAFNNPNNESRVLLASTRACCEGISLT-GASRVVLLDVVWNPA-----VGRQAISR 1429 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ V+ Y LI T + R K + L+ + Sbjct: 1430 AFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1470 >gi|71654268|ref|XP_815757.1| helicase-like protein [Trypanosoma cruzi strain CL Brener] gi|70880835|gb|EAN93906.1| helicase-like protein, putative [Trypanosoma cruzi] Length = 1053 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 57/150 (38%), Gaps = 13/150 (8%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQEWNEGK-IPLLFAH 115 ++ + + D + + + + T++ +N + +L Sbjct: 651 KMLSLFEGIIAEMNRRWQQDGSLPRPIRFCRLDGNSSGAERENTLRSFNSSRGADVLLLS 710 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+N+ ++ ++ + +R + R + G R VFVY L+ T Sbjct: 711 MKAGGVGINITS-ATRVILADSGFNPAD-----DRQAIGRAYRYGQTRPVFVYRLVCYQT 764 Query: 176 IDELVLQRLRTKSTIQDLLLN--ALKKETI 203 ++ + Q+ K + ++ +LK++ + Sbjct: 765 LEHRMFQQKVAKEWLFHTIVEEASLKRDAL 794 >gi|330841728|ref|XP_003292844.1| hypothetical protein DICPUDRAFT_58185 [Dictyostelium purpureum] gi|325076886|gb|EGC30638.1| hypothetical protein DICPUDRAFT_58185 [Dictyostelium purpureum] Length = 931 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 73/204 (35%), Gaps = 23/204 (11%) Query: 17 GENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPI 71 G N S + Q +NG V + ++E K+K+ I K Sbjct: 53 GNVFSKSNKISMFQQFKQNQDESNGLVKGQIMELYRETGKAKLKSSCEYISKLIKEKEKF 112 Query: 72 IVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPLLFAHPASCG 120 ++ H + + L+ A + + + + + + G Sbjct: 113 LIFAHHSDIMDGLESAIQKSKAGYIRIDGSTPAVLRQTYVNKFQTNSSCQVALLSITAAG 172 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GL L N++VF L+W R R + G + V+++YLI +NT+D+ + Sbjct: 173 TGLTLTA-SNLVVFVELYWTPGVL-----RQAEDRVHRIGQTKDVYIHYLIGKNTLDDRI 226 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 + K + L+ ++E + Sbjct: 227 WPIICNKLEVLGETLDG-QEEILR 249 >gi|296005042|ref|XP_002808858.1| DNA helicase, putative [Plasmodium falciparum 3D7] gi|225632255|emb|CAX64136.1| DNA helicase, putative [Plasmodium falciparum 3D7] Length = 1221 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 7/113 (6%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ + I+ + + I + + G GLNL N ++ W+ Sbjct: 1095 HQIYVRLDGSTNTIERQKIIKRFSKDENIFVFLLSTKAGGVGLNL-IAANHVILMDQDWN 1153 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 +R R + G K VF+Y L +NTI+E +L+ + K + Sbjct: 1154 P-----HNDRQAEDRVHRLGQKNEVFIYRLCCKNTIEEAILKCNKAKLHLDQA 1201 >gi|209880686|ref|XP_002141782.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66] gi|209557388|gb|EEA07433.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66] Length = 854 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 23/175 (13%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLAR---------- 83 N Y + K+ + IIEK +V H L Sbjct: 674 TNFFDKYLIKDELVLGDSCKLIKMHQIIEKKVIRREKCLVFCHHTMLLDIVEEYIKLKFG 733 Query: 84 ----LQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLW 138 +D ++++ + + G GLNL + ++ + Sbjct: 734 DKTDFYIRLDGTTPIDTRQKLVEQFQTSSSTLIFLLSTKAAGQGLNLTA-ASTVIMMDID 792 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 ++ + IER R + G + V ++ LI +N+I+E +L+ +K ++ Sbjct: 793 YNPQ-----IERQAEDRVHRLGQSKDVSIFKLICRNSIEEDILKCCESKLSLDAA 842 >gi|284048597|ref|YP_003398936.1| SNF2-related protein [Acidaminococcus fermentans DSM 20731] gi|283952818|gb|ADB47621.1| SNF2-related protein [Acidaminococcus fermentans DSM 20731] Length = 969 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 70/224 (31%), Gaps = 39/224 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLA--------NGAVYYDEEKHWKEVHD 53 K Y + RE ++I + + + ++ NG Y + Sbjct: 733 KLYGEVVREAQAGQGEKSITMLQAIA---RLRDISLCPSLGAGNGKRYSLGDPDCFFGSS 789 Query: 54 EKIKALEVIIE--KANAAPIIVAYHFNSDL------------ARLQKAFPQGRTLDKDPC 99 ++ I++ + ++ ++Q Sbjct: 790 ARLMRTRTILDGVRTKGEKALIFVESRKIQLLLRTFLEQVYGIQVQPPINGTTQAVARQK 849 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++N +L P + G GLN+ G N ++ S W+ + E R + Sbjct: 850 MVNQFNQASGFQVLLLSPEAAGVGLNIT-GANHVIHLSRCWNPAK-----EDQATDRAYR 903 Query: 159 AGFKRAVFVYYLIAQNT-------IDELVLQRLRTKSTIQDLLL 195 G K+AV VY +A +T D + L+ K + L Sbjct: 904 IGQKKAVTVYLPMAVDTDFPEEASFDLNLDALLQYKRDLSRSAL 947 >gi|12224998|emb|CAC21685.1| hypothetical protein [Homo sapiens] Length = 375 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 188 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 247 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G+NL N+++ + + Sbjct: 248 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTS-ANVVILHDIDCNP---- 302 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 303 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 350 >gi|251797976|ref|YP_003012707.1| SNF2-related protein [Paenibacillus sp. JDR-2] gi|247545602|gb|ACT02621.1| SNF2-related protein [Paenibacillus sp. JDR-2] Length = 589 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 19/160 (11%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDP 98 + + K + + +I++ N +I+ + L + G K Sbjct: 363 QIKANTKAEKVMELIQQIND-KVIIFTEYRASQEYLLQFFRSHNILAVPYRGGMNRGKKD 421 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + G+ +L A + G G+NLQ+ + ++ F L W+ +Q I R+ + Sbjct: 422 WMMDLFR-GRAQVLIAT-EAGGEGINLQF-CHNMINFDLPWNPMRVEQRIGRV-----HR 473 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 G K V +Y L TI+E ++ L K + +L++ L Sbjct: 474 LGQKEDVKIYNLCTLGTIEEHIVNLLHEKINLFELVIGEL 513 >gi|157871832|ref|XP_001684465.1| DNA repair protein-like protein [Leishmania major] gi|68127534|emb|CAJ05555.1| DNA repair protein-like protein [Leishmania major strain Friedlin] Length = 922 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 56/168 (33%), Gaps = 21/168 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKA---------- 87 + + +W K + L I ++V F + L Q Sbjct: 707 HLDLSDMSNWSLQLSSKTQYLIDTIRSLPAEDKVVVFSSFLTYLRCAQHWLQAAGVSCAL 766 Query: 88 FPQGRTLDKDPCTIQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + T+ + ++ +++ +L A +SCG GLNL N W+ Sbjct: 767 YSGSMTMKQKQSLLELFHDAARPASPRVLLATISSCGVGLNLT-CANHCFLMEPSWNPGT 825 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 E + R + G + V LIA TI++ + Q K + Sbjct: 826 -----EEQALNRIYRIGQTKPVTFTKLIADGTIEQNISQLCDRKRALS 868 >gi|9627784|ref|NP_054071.1| global transactivator-like protein [Autographa californica nucleopolyhedrovirus] gi|1170083|sp|P41447|GTA_NPVAC RecName: Full=Probable global transactivator; AltName: Full=ATP-dependent helicase GTA gi|559111|gb|AAA66672.1| global transactivator-like protein [Autographa californica nucleopolyhedrovirus] Length = 506 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 63/201 (31%), Gaps = 32/201 (15%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-----------VIIEKANAAPI 71 + +K Q+ K+ E +D I + I Sbjct: 298 QHVLWLILKLRQICCHPYLAMHGKNILETNDCFKMDYMSSKCKRVLDLVDDILNTSNDKI 357 Query: 72 IVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEG---KIPLLFAHPAS 118 I+ + L + F Q ++ +N+ + +L Sbjct: 358 ILVSQWVEYLKIFENFFKQKNIATLMYTGQLKVEDRILAETTFNDAANTQHRILLLSIKC 417 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNTI 176 G GLNL GGN +V W+ + IE R + G + +VY + + N+I Sbjct: 418 GGVGLNL-IGGNHIVMLEPHWNPQ-----IELQAQDRISRMGQTKNTYVYKMLNVEDNSI 471 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 ++ + QR K + + Sbjct: 472 EKYIKQRQDKKIAFVNTVFEE 492 >gi|238494328|ref|XP_002378400.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] gi|220695050|gb|EED51393.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357] Length = 1663 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 60/151 (39%), Gaps = 8/151 (5%) Query: 48 WKEVHDEKIKALEVIIEKANAAPIIVAYHFN-SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 + DE I+A + I+ +++ P + R + + +N Sbjct: 1256 MNSIIDESIRAGDKILVFSHSIPTLDYIEHVLRSSNRKYSRLDGRTPVVTRQDATKRFNL 1315 Query: 107 G-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + + G GLN+ G N ++ F + + E V R + G ++ V Sbjct: 1316 GSEKQVYLISTRAGGLGLNI-PGANRVIIFDFKFSP-----VWEEQAVGRAYRLGQQKPV 1369 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY IA T +E++ + K+ + +++ Sbjct: 1370 FVYRFIAGGTFEEVMYNKAVFKTQLAFRVVD 1400 >gi|322500523|emb|CBZ35600.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1265 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 56/168 (33%), Gaps = 21/168 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKA---------- 87 + + +W K + L I ++V F + L Q Sbjct: 1049 HLDLSDMNNWSLQLSSKTQYLIDTIRSLPAEDKVVVFSSFLTYLRCAQHWLQAAGVSCAL 1108 Query: 88 FPQGRTLDKDPCTIQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + T+ + ++ +++ +L A +SCG GLNL N W+ Sbjct: 1109 YSGSMTMKQKQSLLELFHDAARPASPRVLLATISSCGVGLNLT-CANHCFLMEPSWNPGT 1167 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 E + R + G + V LIA TI++ + Q K + Sbjct: 1168 -----EEQALNRIYRIGQTKPVTFTKLIADGTIEQNISQLCDRKRALS 1210 >gi|298385406|ref|ZP_06994964.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides sp. 1_1_14] gi|298261547|gb|EFI04413.1| zinc finger Ran-binding domain-containing protein 3 [Bacteroides sp. 1_1_14] Length = 502 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 58/154 (37%), Gaps = 15/154 (9%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ-------E 103 KI I+ + +IV + + LQK FP+ T+ I Sbjct: 332 KGKIAQAVDFIKTFLDSGKKLIVFCSLHEIVDELQKVFPKAVTVTGRDSAINKQASVDAF 391 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N + L+ + G GL L N + F L W + Q +R + G K Sbjct: 392 QNNPNVQLIICSIKAAGVGLTLTASSN-VAFIELAWTYADCCQCEDR-----AHRIGQKD 445 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V YYL+ + TID + + K +I ++N+ Sbjct: 446 NVTCYYLLGRGTIDHTIYSLIHRKKSIASEIMNS 479 >gi|168000545|ref|XP_001752976.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162695675|gb|EDQ82017.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 653 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 66/162 (40%), Gaps = 25/162 (15%) Query: 54 EKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ---------------GRTLDK 96 K++ + ++++ N +++ + LA ++ Q + Sbjct: 455 AKLRWVLDMVQQCNDAKEKLLIFSEYLYSLALIENMAVQRMKWSKGLQILRLDGSLPPQE 514 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++N + ++ +L A +CG G++L G + ++ + W+ + R ++R Sbjct: 515 RERVQHKFNTDPEVRVLCASIKACGEGISL-VGASRVILLEVLWNPS-----VPRQAISR 568 Query: 156 QRQAGFKRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLLLN 196 + G +R V VY LIA T +E + K + LL + Sbjct: 569 AFRIGQQRKVVVYRLIAAGTYEEMNMHAAATRKEWLSRLLFD 610 >gi|170578325|ref|XP_001894363.1| Helicase conserved C-terminal domain containing protein [Brugia malayi] gi|158599086|gb|EDP36796.1| Helicase conserved C-terminal domain containing protein [Brugia malayi] Length = 800 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 23/217 (10%), Positives = 58/217 (26%), Gaps = 31/217 (14%) Query: 2 KQYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI--- 56 K Y F+ + + G + N ++ + +D + + + Sbjct: 182 KNYQYFKNVDDKKIEYAGSKLSLLNVLTQ---LRKCVAHPYLFDGVEPEPFKEGDHLFEV 238 Query: 57 ------KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PC 99 + A +++ L Q + Sbjct: 239 SGKFLLLDRLLTFLFAKGHRVLIFSQMTRVLDITQDYLVYKGYNYQRLDGSVRAEERFAA 298 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I G GG+ ++F ++ + + R + Sbjct: 299 VNHFQTNSDIFCFLLSTR-AGGLGLNLTGGDTVIFLDSDFNPQN-----DIQAAARCHRI 352 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + V + L+A+ T+++++ R K + +L Sbjct: 353 GQTKPVKIIRLVARYTVEDMIQCRAARKLKMTQEILE 389 >gi|146092157|ref|XP_001470221.1| DNA repair protein-like protein [Leishmania infantum] gi|134085015|emb|CAM69416.1| DNA repair protein-like protein [Leishmania infantum JPCM5] Length = 1265 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 56/168 (33%), Gaps = 21/168 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKA---------- 87 + + +W K + L I ++V F + L Q Sbjct: 1049 HLDLSDMNNWSLQLSSKTQYLIDTIRSLPAEDKVVVFSSFLTYLRCAQHWLQAAGVSCAL 1108 Query: 88 FPQGRTLDKDPCTIQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + T+ + ++ +++ +L A +SCG GLNL N W+ Sbjct: 1109 YSGSMTMKQKQSLLELFHDAARPASPRVLLATISSCGVGLNLT-CANHCFLMEPSWNPGT 1167 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 E + R + G + V LIA TI++ + Q K + Sbjct: 1168 -----EEQALNRIYRIGQTKPVTFTKLIADGTIEQNISQLCDRKRALS 1210 >gi|18606477|gb|AAH23186.1| Smarca4 protein [Mus musculus] Length = 563 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 58/159 (36%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCT 100 K + L+ I+ K A +++ S + ++ F + Sbjct: 28 SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML 87 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ +NE + + G GLNLQ + ++ F W+ + + R + Sbjct: 88 LKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQAQDRAHR 141 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G + V V L N+++E +L + K + ++ A Sbjct: 142 IGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA 180 >gi|328721366|ref|XP_001942895.2| PREDICTED: transcriptional regulator ATRX homolog [Acyrthosiphon pisum] Length = 1045 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 50/104 (48%), Gaps = 9/104 (8%) Query: 97 DPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +N+ K+ LL + G+NL G N ++ F + W+ + Q I R+ Sbjct: 803 REDFCERFNDITNTKMRLLLLSTKAFNLGINL-IGANRVIIFDVTWNPSLNVQSIFRV-- 859 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ ++Y LI++ T+++ + +R +K + +++ Sbjct: 860 ---FRFGQKKPCYIYRLISEGTMEQKIYERQISKLSTAFRVVDE 900 >gi|322830312|gb|EFZ33384.1| SNF2 DNA repair protein, putative [Trypanosoma cruzi] Length = 1086 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 56/156 (35%), Gaps = 12/156 (7%) Query: 51 VHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 +H + K + II + + ++ S + + + + KI Sbjct: 888 LHSIREKKEKAIIFSQYVGSQDFISRTLTSFDIVSSTIRGRDCHERRRRTIEKFREDEKI 947 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L +GL+ N ++ + WW+ + +E + R + RAV VY Sbjct: 948 TCLLLSTQIGAYGLDFTA-ANHVILWDSWWNPQ-----VESQAIARAYRRNQTRAVIVYR 1001 Query: 170 LIA--QNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L + ++TI VL+ K + ++N + Sbjct: 1002 LASEFEDTI---VLKTQIRKLALFRCIMNEEASRAV 1034 >gi|121713876|ref|XP_001274549.1| DNA excision repair protein (Rad5), putative [Aspergillus clavatus NRRL 1] gi|119402702|gb|EAW13123.1| DNA excision repair protein (Rad5), putative [Aspergillus clavatus NRRL 1] Length = 1252 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL + + WW IE + R + G R V V Sbjct: 1149 VLLISLRAGGVGLNLT-VASNVFMMDPWWSFA-----IEAQAIDRVHRMGQLRDVAVTRF 1202 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 I +++I+ +LQ K I L Sbjct: 1203 IVKDSIEGRMLQVQERKMNIAGSL 1226 Score = 35.1 bits (79), Expect = 5.7, Method: Composition-based stats. Identities = 3/46 (6%), Positives = 15/46 (32%), Gaps = 2/46 (4%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEK 46 Y + +R +++ + ++ ++ Q + + Sbjct: 827 IYTRAKRTFNDNVEAGTLLKSFSTIFAQILRLRQTCCHPILTRNKT 872 >gi|323303978|gb|EGA57758.1| Rad5p [Saccharomyces cerevisiae FostersB] Length = 1169 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 19/176 (10%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + + K LQL + + + I+EK + + F+ D Sbjct: 991 SKSSKITALXKELQL----LQDSSAGEQVVIFSQ-FSTYLDILEKE------LTHTFSKD 1039 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 +A++ K + ++ + +L + G GLNL + W Sbjct: 1040 VAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLT-CASHAYMMDPW 1098 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W +E + R + G +V V I Q++I+E +L+ K TI + + Sbjct: 1099 WSPS-----MEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIGEAM 1149 >gi|315050848|ref|XP_003174798.1| transcription termination factor 2 [Arthroderma gypseum CBS 118893] gi|311340113|gb|EFQ99315.1| transcription termination factor 2 [Arthroderma gypseum CBS 118893] Length = 1164 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 51/115 (44%), Gaps = 8/115 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +L + +I+ + + + +L + G GLNL G+I+ ++ Q ++R Sbjct: 1044 MSLKQRNASIETFSTDDSVTILLVTIGAGGVGLNLTA-GSIVYIMEPQYNPAAIAQAVDR 1102 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETIH 204 + + G KR V I ++I+E + + + K + D+ LN + + + Sbjct: 1103 V-----HRIGQKREVTTIQFIMNDSIEEKITELAKRKQKLADMSLNRKMDRRELQ 1152 >gi|302652102|ref|XP_003017911.1| hypothetical protein TRV_08077 [Trichophyton verrucosum HKI 0517] gi|291181496|gb|EFE37266.1| hypothetical protein TRV_08077 [Trichophyton verrucosum HKI 0517] Length = 1177 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL N + WW +E + R + G R V V Sbjct: 1074 VLLISLRAGGVGLNLT-VANHVFMMDPWWSFA-----VEAQAIDRVHRMGQLRDVKVSRF 1127 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 + +N+I+ +L+ K I L Sbjct: 1128 VVKNSIEGRILKIQERKMMIAGSL 1151 >gi|302497381|ref|XP_003010691.1| hypothetical protein ARB_03393 [Arthroderma benhamiae CBS 112371] gi|291174234|gb|EFE30051.1| hypothetical protein ARB_03393 [Arthroderma benhamiae CBS 112371] Length = 1177 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL N + WW +E + R + G R V V Sbjct: 1074 VLLISLRAGGVGLNLT-VANHVFMMDPWWSFA-----VEAQAIDRVHRMGQLRDVKVSRF 1127 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 + +N+I+ +L+ K I L Sbjct: 1128 VVKNSIEGRILKIQERKMMIAGSL 1151 >gi|313239189|emb|CBY14147.1| unnamed protein product [Oikopleura dioica] Length = 522 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 6/100 (6%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +++ + + I + GL L ++ F +W+ + + Sbjct: 233 QPKERNNKVHRFQTDSTIKVCLLTTGVGAVGLTLTA-ATRVIVFDPYWNPSK-----DDQ 286 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 V R + G K AV V+ LI TI+E + + K +I Sbjct: 287 AVDRAYRIGQKNAVVVFRLITCETIEEKIYSKQLFKKSII 326 >gi|224013532|ref|XP_002296430.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220968782|gb|EED87126.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 119 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 8/90 (8%) Query: 97 DPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N+ + ++ + G GL L G + + F W+ + + Sbjct: 36 RQQKVDAFNDKESNVDIMLLSTKAAGVGLTL-NGADRAIIFDPSWNPST-----DAQAID 89 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 R + G + V VY +I T++E + ++ Sbjct: 90 RCYRIGQLKNVTVYRMICAGTVEEKMYEKQ 119 >gi|224541746|ref|ZP_03682285.1| hypothetical protein CATMIT_00918 [Catenibacterium mitsuokai DSM 15897] gi|224525350|gb|EEF94455.1| hypothetical protein CATMIT_00918 [Catenibacterium mitsuokai DSM 15897] Length = 716 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 18/172 (10%) Query: 37 NGAVYYDEEKHWKEVH-DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT 93 N ++H K + II++ +IV + + ++ K T Sbjct: 521 NHHEIRQVSWRVDDLHDSSKACRMLEIIQEAKEEGRKVIVFSFYLDTIRKISKLLGNQCT 580 Query: 94 --------LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I E+ +L + + G GLN+Q ++++ Sbjct: 581 EIINGSVSPKHRQEIIDEFESAPAGSVLLSQIMAGGTGLNIQS-ASVVIICEPQIKPS-- 637 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 IE ++R + G R V VY L+ +TIDE + L K+ + + + Sbjct: 638 ---IESQAISRAYRMGQSRNVLVYRLLCNDTIDERITDILTRKTNVFNAFAD 686 >gi|260949761|ref|XP_002619177.1| hypothetical protein CLUG_00336 [Clavispora lusitaniae ATCC 42720] gi|238846749|gb|EEQ36213.1| hypothetical protein CLUG_00336 [Clavispora lusitaniae ATCC 42720] Length = 187 Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 24/177 (13%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEV-----HDEKIKALEVIIEKANAAPIIVAYHF 77 S + + + E+ +V + +E ++ + + Sbjct: 1 MTPISLQQRLKLVLSHLRALKEQSPGFQVVVFSQFSSYLDLIENELKLLDGGGETEFSVY 60 Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEW----NEGKIPLLFAHPASCGHGLNLQYGGNILV 133 D L++ +Q++ EGKI +L + G GLNL N Sbjct: 61 KFDGRL---------NLNERDKILQQFVQKSEEGKITVLLLSLKAGGVGLNLT-CANKAF 110 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 WW Q I+RI + G ++ V V + +N+I+ +L+ K + Sbjct: 111 MMDPWWSPSIEDQAIDRI-----HRIGQEQNVKVTRFVVKNSIETKMLKIQERKRMM 162 >gi|23099360|ref|NP_692826.1| helicase [Oceanobacillus iheyensis HTE831] gi|22777589|dbj|BAC13861.1| helicase (Snf2/Rad54 family) [Oceanobacillus iheyensis HTE831] Length = 556 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 66/173 (38%), Gaps = 18/173 (10%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------- 90 + K + + +I+ +IV + + LQ Q Sbjct: 335 HPLKQIISDLESLEQHIKAEQMVKLIQSLGDEKVIVFTEYRATQYYLQWFLQQHGITSVP 394 Query: 91 ---GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G K Q + + +L A + G G+NLQ+ + ++ + L W+ +Q Sbjct: 395 FRGGFKRGKKDWMKQLFRD-HAQVLIAT-EAGGEGINLQF-CHNMINYDLPWNPMRLEQR 451 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 I RI + G ++ V +Y L+ +NTI+E +L L K + ++ L Sbjct: 452 IGRI-----HRFGQEKDVQIYNLVIKNTIEEHMLSLLYEKIDLFQNVIGNLDA 499 >gi|328849333|gb|EGF98516.1| hypothetical protein MELLADRAFT_95635 [Melampsora larici-populina 98AG31] Length = 177 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 48/129 (37%), Gaps = 13/129 (10%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ T ++ + + + G GLN+ + + W+ + Sbjct: 35 YRQLHGDQSTFERTSQLNSFTKDPNVEAFVVSIEAGGVGLNMT-CADEVYLMDAHWNPQV 93 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL-------N 196 QQ ++R+ + G + V V++++ +I++ + + K+ + ++ Sbjct: 94 VQQAVDRL-----HRIGQAKPVRVFHVVTGQSIEQHLYNVQKRKAALAKRVITLTVPTEE 148 Query: 197 ALKKETIHV 205 K E + V Sbjct: 149 LEKAEALRV 157 >gi|331700042|ref|YP_004336281.1| helicase domain-containing protein [Pseudonocardia dioxanivorans CB1190] gi|326954731|gb|AEA28428.1| helicase domain protein [Pseudonocardia dioxanivorans CB1190] Length = 716 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 6/121 (4%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 F R + + + + + + G GLNLQ +I++ Sbjct: 570 FTRQGVRFSSIRGEQSRTARQQNVDAFVEDPDVAIAVCSLTAAGVGLNLQVASDIVLAEL 629 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W E+ + R + G V + +IA TID + + + K + L+ Sbjct: 630 SWTAAEQT------QAIDRCHRIGQTEPVTAWRIIAAQTIDARIAELIDDKGNLAAQALD 683 Query: 197 A 197 Sbjct: 684 G 684 >gi|159120058|ref|XP_001710245.1| Transcription regulatory protein SNF2 [Giardia lamblia ATCC 50803] gi|157438363|gb|EDO82571.1| Transcription regulatory protein SNF2 [Giardia lamblia ATCC 50803] Length = 2079 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKANA--APIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCT 100 K++ L+ I+ K + +++ F F Sbjct: 1094 SGKLELLDNILAKLHKTSHRVLIFSQFKKVLDVLSSYLHYRQYKFVRFDGSVKDVDRNSM 1153 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N + + HGLNLQ + ++ F ++ ++ R + Sbjct: 1154 IRGYNREDSKDFVFLLSTRAASHGLNLQT-ADTVIIFDCDYN-----GTYDQQAQDRCYR 1207 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G V V+ L + I+ +L +K ++ ++++A Sbjct: 1208 LGQVNPVKVFKLYSNTAIESKMLSVATSKLSLATIVMDA 1246 >gi|302505719|ref|XP_003014566.1| SNF2 family helicase/ATPase, putative [Arthroderma benhamiae CBS 112371] gi|291178387|gb|EFE34177.1| SNF2 family helicase/ATPase, putative [Arthroderma benhamiae CBS 112371] Length = 1862 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 67/193 (34%), Gaps = 10/193 (5%) Query: 8 QRELYCDLQGENIEAFNSASKT-VKCLQL--ANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + +++G+ S+ K + + + ++ DE IKA + I+ Sbjct: 1276 VEDDVLEIEGQTAITDEVVSQFEQKFKDIKDLDSPENSHRTQMVGQIVDESIKAGDKILI 1335 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPASCGHGL 123 + + + + G+T +++ + + GL Sbjct: 1336 FSGYLHTLSYLGSMLEARGHKYCRLDGKTPIATRQAATRDFTASDAHVYLISTKAGALGL 1395 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 N+ G N ++ F ++ E + R + G + VFVY + T +EL+ ++ Sbjct: 1396 NI-IGANRVIIFESEYNPT-----WEEQAIGRAYRLGQTKDVFVYRFVMGGTFEELIHEK 1449 Query: 184 LRTKSTIQDLLLN 196 K + ++ Sbjct: 1450 GVFKKNMALRAID 1462 >gi|159164911|gb|ABV80240.2| mutant required to maintain repression 1 [Zea mays] Length = 1435 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 64/175 (36%), Gaps = 23/175 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------- 87 + + E + V + +A +++ F L +++ Sbjct: 1202 PMLAKVRSNPYEGVKTRFVIEVVRLSEALREKVLIFSQFIQPLELIKEHLRKFFKWREGK 1261 Query: 88 ---FPQGRTLDK-DPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+ L + +I+ +N +L A +C G++L G + +V + W+ Sbjct: 1262 EILQMDGKILPRYRQASIEAFNNPNNDSRVLLASTRACCEGISLT-GASRIVLLDVVWNP 1320 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ R ++R + G K+ V+ Y LI T + R K + L+ + Sbjct: 1321 -----VVGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 1370 >gi|126433435|ref|YP_001069126.1| SNF2-related protein [Mycobacterium sp. JLS] gi|126233235|gb|ABN96635.1| SNF2-related protein [Mycobacterium sp. JLS] Length = 1122 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 62/166 (37%), Gaps = 17/166 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF--------NSDLARLQKAF 88 + + + + K++ L I+E+ N ++V HF R+ Sbjct: 680 FMAMRQASMRQGLKSSKMQRLIEIVEEAEDNGRRVVVFSHFLDVLSDVARHMPGRVVGPL 739 Query: 89 PQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + + +++ + +L A + G GLN+Q +++V Sbjct: 740 TGSVAASQRQVMVDDFSAAQKGAVLVAQIVAGGVGLNIQA-ASVVVICEPQLKPTT---- 794 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 E + R + G +V V+ L++ +D+ V + L TK + + Sbjct: 795 -EWQAIARAHRMGQLESVQVHRLLSDEGVDQRVREILATKKLLFES 839 >gi|326478744|gb|EGE02754.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97] Length = 1188 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 8/115 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +L + +I+ + + + +L + G GLNL G+++ ++ Q ++R Sbjct: 1068 MSLKQRNASIETFSTDNNVTILLVTIGAGGVGLNLTA-GSMVYIMEPQYNPAAIAQAVDR 1126 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETIH 204 + + G R V I ++I+E + + + K + D+ LN + + + Sbjct: 1127 V-----HRIGQTREVTTIQFIMNDSIEEKITELAKRKQKLADMSLNRKMDRRELQ 1176 >gi|326469727|gb|EGD93736.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] Length = 1188 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 8/115 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +L + +I+ + + + +L + G GLNL G+++ ++ Q ++R Sbjct: 1068 MSLKQRNASIETFSTDNNVTILLVTIGAGGVGLNLTA-GSMVYIMEPQYNPAAIAQAVDR 1126 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETIH 204 + + G R V I ++I+E + + + K + D+ LN + + + Sbjct: 1127 V-----HRIGQTREVTTIQFIMNDSIEEKITELAKRKQKLADMSLNRKMDRRELQ 1176 >gi|302653441|ref|XP_003018547.1| hypothetical protein TRV_07448 [Trichophyton verrucosum HKI 0517] gi|291182199|gb|EFE37902.1| hypothetical protein TRV_07448 [Trichophyton verrucosum HKI 0517] Length = 1186 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 8/115 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +L + +I+ + + + +L + G GLNL G+++ ++ Q ++R Sbjct: 1066 MSLKQRNASIETFSTDNNVTILLVTIGAGGVGLNLTA-GSMVYIMEPQYNPAAIAQAVDR 1124 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETIH 204 + + G R V I ++I+E + + + K + D+ LN + + + Sbjct: 1125 V-----HRIGQTREVTTIQFIMNDSIEEKITELAKRKQKLADMSLNRKMDRRELQ 1174 >gi|302063910|ref|ZP_07255451.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tomato K40] Length = 331 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 61/195 (31%), Gaps = 33/195 (16%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPII 72 + + ++ QL + K++ + ++ + + +I Sbjct: 143 EYNQIMRSDTHRFARLGALRQL---------------LERVKVRIVADLMAELDVDDKVI 187 Query: 73 VAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + + +A L++ + + + + ++ G Sbjct: 188 LFCEYQESVATLREHCLKMGIGCVTLVGSDSPKKRQKAIDAFQQDPDCRVFIGTRSAAGT 247 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G NL N + F L W R + G R V V +A++TID+ + Sbjct: 248 GYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAEDTIDQQLW 301 Query: 182 QRLRTKSTIQDLLLN 196 Q L K + L++ Sbjct: 302 QMLMDKRALASDLID 316 >gi|258574015|ref|XP_002541189.1| predicted protein [Uncinocarpus reesii 1704] gi|237901455|gb|EEP75856.1| predicted protein [Uncinocarpus reesii 1704] Length = 256 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 17/147 (11%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKI 109 + + + + F + L + + I+E+ + + Sbjct: 79 NWLTNSPGTKVTIFTQFRGMVRILSNMCIKQGWGHTTLTGNAPPSERHRDIEEFRVDPTV 138 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + + G GLNL + + LWW+ + IE+ R + G + V + Sbjct: 139 RVLISSLKAGGTGLNLT-MADKCILVDLWWN-----EAIEQQAFCRLFRYGQTKEVEIVR 192 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 + +N+ID+ + KST + + Sbjct: 193 ISVKNSIDDRIQLIQHEKSTSIEKTIG 219 >gi|328868528|gb|EGG16906.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1268 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ F W+ + R + G K+ V +Y L+ TI+E + R K + Sbjct: 879 VILFDPDWNPST-----DTQARERVYRIGQKKNVTIYRLMTTGTIEEKIYHRQIYKQFLS 933 Query: 192 DLLLNALKKE 201 + +L ++ Sbjct: 934 NKILKDPRQR 943 >gi|126323929|ref|XP_001378454.1| PREDICTED: similar to mDomino [Monodelphis domestica] Length = 3065 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 63/167 (37%), Gaps = 19/167 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 + Q+ N V E + K++AL ++++K + +++ L L+ Sbjct: 1760 LQQLHQITNLKVLQFPELRLVQYDSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEM 1819 Query: 87 AFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + ++ +N + +I S G+NL + +VF+ Sbjct: 1820 FLDFHYLTYVRVDENANSEQRQELMKSFNKDKRIFCAILSTHSRSTGINL-VEADTVVFY 1878 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + +++ + G + + +Y L++ N+I+E +L+ Sbjct: 1879 DNDLNP-----VMDAKAQEWCDRIGRSKDIHIYRLVSGNSIEEKLLK 1920 >gi|331225801|ref|XP_003325571.1| hypothetical protein PGTG_07404 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309304561|gb|EFP81152.1| hypothetical protein PGTG_07404 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 371 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 9/138 (6%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 K + ++ ++ I+ Y D + ++ + + + A Sbjct: 57 KAQFKVLLFSQSTKMMDILEYWLQQDFPEFVRLDGSVAIRERFKRVDEFQTDPSKFIFLA 116 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GLNL ++ W+ + + R + G KR V LI+ Sbjct: 117 SIKAAGVGLNLTAANKVV----PSWNPSH-----DAQAMDRVVRIGQKREVECIRLISSG 167 Query: 175 TIDELVLQRLRTKSTIQD 192 T +EL+ R K + + Sbjct: 168 TTEELIYHRQLYKQGLSE 185 >gi|23577840|ref|NP_703032.1| global transactivator [Rachiplusia ou MNPV] gi|23476485|gb|AAN28032.1| global transactivator [Rachiplusia ou MNPV] Length = 505 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 61/200 (30%), Gaps = 31/200 (15%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-----------VIIEKANAAPI 71 + +K Q+ +K+ E + I + I Sbjct: 298 QHVLWLILKLRQICCHPYLAMHDKNILETNGCFKMDYMSSKCKRVLDLVDNILNTSDDKI 357 Query: 72 IVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWNEGKI--PLLFAHPASC 119 I+ + L + F Q ++ +N+ +L Sbjct: 358 ILVSQWVEYLKIFENFFKQKNIATLMYTGQLKVEDRILAETTFNDATNTHRILLLSIKCG 417 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNTID 177 G GLNL GGN +V W+ + IE R + G + VY + + N+I+ Sbjct: 418 GVGLNL-IGGNHIVMLEPHWNPQ-----IELQAQDRISRMGQTKNTHVYKMLNVEDNSIE 471 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 + + QR K + + Sbjct: 472 KYIKQRQDKKIAFVNTVFEE 491 >gi|328871601|gb|EGG19971.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1331 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 6/112 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ + N+ K + + G GL L +++VF L+W R Sbjct: 876 PPAVREANVTRFQNQPKCQVALLSITAAGTGLTLTA-SSLVVFAELYWTPGVL-----RQ 929 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G K V ++YLI + T+D+ + + K + L+ +++ + Sbjct: 930 AEDRVHRIGQKNEVNIHYLIGKGTLDDRIWPMICNKLEVIGETLDGQEEKLL 981 >gi|46121223|ref|XP_385166.1| hypothetical protein FG04990.1 [Gibberella zeae PH-1] Length = 1057 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 18/151 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSD------------LARLQKAFPQGRTLDKDPCTIQEWNE 106 + ++ + IIV F L L K + N Sbjct: 841 ILTWLQNSPKDKIIVFIEFTITAKALGCILEKLGLKFLYYNQIASTPARKVKAYNEFQNN 900 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I +L A G GLNLQ N+++ +W++ Q R + G K+ Sbjct: 901 SDIRILVASIKCGGTGLNLQ-IANLVIIDDIWFNTTVEQ-----QAFGRVNRIGQKKETK 954 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + ++A+ T+DE ++ K+ I +L Sbjct: 955 LVRILARGTLDERLVMLQDAKAAIVSNVLQD 985 >gi|237643583|ref|YP_002884273.1| GTA [Bombyx mandarina nucleopolyhedrovirus] gi|229358129|gb|ACQ57224.1| GTA [Bombyx mandarina nucleopolyhedrovirus] Length = 506 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 62/201 (30%), Gaps = 32/201 (15%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-----------VIIEKANAAPI 71 + +K Q+ ++ E D I + I Sbjct: 298 QHVLWLILKLRQICCHPYLAMHGRNLLETDDCFKMDYMSSKCKRVLDLVDDILNTSDDKI 357 Query: 72 IVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN---EGKIPLLFAHPAS 118 I+ + L + F Q ++ +N + + +L Sbjct: 358 ILVSQWVEYLKIFENFFKQKNIATLMYTGQLKVEDRILADTTFNNAADTQHRILLLSIKC 417 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNTI 176 G GLNL GGN +V W+ + IE R + G + +VY + + N+I Sbjct: 418 GGVGLNL-IGGNHIVMLEPHWNPQ-----IELQAQDRISRMGQTKNTYVYKMLNVEDNSI 471 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 ++ + QR K + + Sbjct: 472 EKYIKQRQDKKIAFVNTVFEE 492 >gi|38233941|ref|NP_939708.1| hypothetical protein DIP1355 [Corynebacterium diphtheriae NCTC 13129] gi|38200202|emb|CAE49883.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length = 884 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 16/151 (10%) Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA--------FPQGRTLDKDPCTI 101 K++ L I+++A +I+ +F S L R++K + I Sbjct: 702 DCAKMERLIDIVKEAESAGKNVIIFSYFRSVLERIEKDLGEYVAGSITADVPPQRRQQLI 761 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 E +L + G GLN+Q ++++F + R + G Sbjct: 762 DELGNTGRHVLLLQIVAGGVGLNIQK-ASVVIFTEAQVKPTLVD-----QAIARAHRMGQ 815 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + V VY L +T+DE + L K + D Sbjct: 816 RDPVTVYRLFGADTVDERLTALLEHKRAVFD 846 >gi|9630851|ref|NP_047448.1| GTA [Bombyx mori NPV] gi|3745870|gb|AAC63717.1| GTA [Bombyx mori NPV] Length = 506 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 63/201 (31%), Gaps = 32/201 (15%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE-----------VIIEKANAAPI 71 + +K Q+ ++ E +D I + I Sbjct: 298 QHVLWLILKLRQICCHPYLAMHGRNLLETNDCFKMDYMSSKCKRVLDLVDDILNTSDDKI 357 Query: 72 IVAYHFNSDLARLQKAFPQGRT----------LDKDPCTIQEWN---EGKIPLLFAHPAS 118 I+ + L + F Q ++ +N + + +L Sbjct: 358 ILVSQWVEYLKIFENFFKQKNIATLMYTGQLKVEDRILAETTFNNAADTQHRILLLSIKC 417 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNTI 176 G GLNL GGN +V W+ + IE R + G + +VY + + N+I Sbjct: 418 GGVGLNL-IGGNHIVMLEPHWNPQ-----IELQAQDRISRMGQTKNTYVYKMLNVEDNSI 471 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 ++ + QR K + + Sbjct: 472 EKYIKQRQDKKIAFVNTVFEE 492 >gi|71410768|ref|XP_807662.1| helicase-like protein [Trypanosoma cruzi strain CL Brener] gi|70871713|gb|EAN85811.1| helicase-like protein, putative [Trypanosoma cruzi] Length = 1060 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 56/150 (37%), Gaps = 13/150 (8%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQEWNE-GKIPLLFAH 115 ++ + + D + + + + T++ +N +L Sbjct: 652 KMLSLFEGIIAEMNRRWQQDGSLPRPIRFCRLDGNSSGAERENTLRSFNSLRGADVLLLS 711 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+N+ ++ ++ + +R + R + G R VFVY L+ T Sbjct: 712 MKAGGVGINITS-ATRVILADSGFNPAD-----DRQAIGRAYRYGQTRPVFVYRLVCYQT 765 Query: 176 IDELVLQRLRTKSTIQDLLLN--ALKKETI 203 ++ + Q+ K + ++ +LK++ + Sbjct: 766 LEHRMFQQKVAKEWLFHTIVEEASLKRDAL 795 >gi|164425263|ref|XP_963002.2| hypothetical protein NCU06190 [Neurospora crassa OR74A] gi|157070856|gb|EAA33766.2| predicted protein [Neurospora crassa OR74A] Length = 1893 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Query: 93 TLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + ++E+N + + + G GLN+ G N +V F + E Q Sbjct: 1378 PVSQRQAAVKEFNAVDSLDVYLISTRAGGVGLNI-PGANRVVLFDFGFTPAEEQ-----Q 1431 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V R + G ++ VFVY+L T + + K + + +++ K Sbjct: 1432 AVGRAYRIGQEKKVFVYHLKVGGTYETAIHNLAIFKRQLSERVVDKKK 1479 >gi|167463289|ref|ZP_02328378.1| helicase (Snf2/Rad54 family) protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322384854|ref|ZP_08058515.1| RNA polymerase-associated helicase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321150323|gb|EFX43825.1| RNA polymerase-associated helicase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 599 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPCTI 101 + K + + +I +I+ + + D + G K + Sbjct: 374 SNTKAEKVMELIRNIQ-EKVIIFTEYRASQEYLLKYLKDRGITAVPYRGGMNRGKKDWMM 432 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + +L A + G G+NLQ+ + ++ F L W+ +Q I R+ + G Sbjct: 433 DLFRN-RAQVLVAT-EAGGEGINLQF-CHHIINFDLPWNPMRVEQRIGRV-----HRLGQ 484 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V +Y L Q TI+E +L L K + + ++ L Sbjct: 485 TNDVKIYNLSTQGTIEEHILNLLHEKINMFEAVIGEL 521 >gi|123477453|ref|XP_001321894.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121904729|gb|EAY09671.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 1354 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 23/209 (11%), Positives = 58/209 (27%), Gaps = 34/209 (16%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------------DEKIKALEV 61 + ++ + ++ K + + + + K L Sbjct: 593 QIDESTVDTSHESASIQK---VCCHPFLIEGAEEYYTKKFNLSRLELLTQLSTKFVWLSK 649 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGK 108 ++ + + +++ L L++ + + K + Sbjct: 650 VLAELKRDNHKVLIFSQKVQLLHILREFCMLSQYNNELLIGEMSDIEKSEAIDRYSKSPD 709 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + GLNL + + F W+ + + R + G + V V Sbjct: 710 SFVFLISTRAGSEGLNLT-VADTAIIFDPDWNPQN-----DLQAQARVHRIGQTQKVDVV 763 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 LI T + + R + K + LL Sbjct: 764 RLITYQTYEHEMFVRAQRKLGLWLDLLGE 792 >gi|170585925|ref|XP_001897732.1| SNF2 family N-terminal domain containing protein [Brugia malayi] gi|158594834|gb|EDP33412.1| SNF2 family N-terminal domain containing protein [Brugia malayi] Length = 1150 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 63/243 (25%), Gaps = 70/243 (28%) Query: 25 SASKTVKCLQLANGAVY-----------------YDEEKHWKEVHDEKIKALEVIIEKA- 66 + ++ Q ++ + E + + Sbjct: 845 VLTLLMRLRQACVHFALINQAVDMEALQMLGVEEDEDAGMLSKCFSNISLLDEKALTEKL 904 Query: 67 ----------------------------------NAAPIIVAYHFNSDLARLQKAFPQGR 92 ++ + S L L+ + + Sbjct: 905 LGEDGNKQMEQLFQKTFISTKIKKLFEQVDYALSCGDKCVIVSQWTSLLNILEYHLERKK 964 Query: 93 TLD----------KDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L +N + ++ G GGN L L W+ Sbjct: 965 ILYTSINGKVSSSDRQNRANSFNMMDSGPHVMLLSLT-AGGVGLNLVGGNHLFLVDLHWN 1023 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 QQ +RI + G + VF++ L+ TI+E VL R K T+ +L+ + Sbjct: 1024 PALEQQACDRI-----YRIGQTKNVFIHKLVCLETIEERVLALQRIKQTLAKDVLDGVAS 1078 Query: 201 ETI 203 + + Sbjct: 1079 KKL 1081 >gi|322700580|gb|EFY92334.1| DNA repair protein rad-5 [Metarhizium acridum CQMa 102] Length = 1138 Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 17/140 (12%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQEWNEGK-IP 110 + ++ +V F S L+ ++ ++++ E K Sbjct: 994 LRKERPHMKSVVFSQFTSFLSLIEPALARINVKFLRLDGSMAQKARAAVLEDFTEKKGFM 1053 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL + WW +E + R + G + V + Sbjct: 1054 VLLISLRAGGVGLNLTS-AGRVFMMDPWWSFA-----VEAQAIDRVHRLGQEDEVVIKRF 1107 Query: 171 IAQNTIDELVLQRLRTKSTI 190 I + +++E +L+ K + Sbjct: 1108 IVKQSVEERMLRVQERKKFM 1127 >gi|126667815|ref|ZP_01738782.1| Superfamily II DNA/RNA helicase [Marinobacter sp. ELB17] gi|126627763|gb|EAZ98393.1| Superfamily II DNA/RNA helicase [Marinobacter sp. ELB17] Length = 877 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 6/105 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + + K + + G G+ L ++F L W Sbjct: 683 KRQAEADRFQADPKCTVFLGSIGAAGVGITLTA-ATKVLFGELDWVPGIVS-----QAED 736 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G V V++ + +ID +++RL K + D L+ K Sbjct: 737 RAHRIGQLDNVLVWHAVVDGSIDARMVRRLIEKQKVLDSALDDEK 781 >gi|239615480|gb|EEQ92467.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3] Length = 1091 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 7/115 (6%) Query: 92 RTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +L + + E+ + I +L A + G GLNL G+ + ++ Q ++R Sbjct: 970 MSLKQRNAALDEFRDNNDITVLLATLGAGGVGLNLTS-GSRVYIMEPQYNPAAIAQAVDR 1028 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + + G R V I +++I+E + + + K + D+ LN + + + Sbjct: 1029 V-----HRLGQTREVTTIQFIMKDSIEEKIAELAKKKQQMADMSLNRSRLDRREL 1078 >gi|194288961|ref|YP_002004868.1| hypothetical protein RALTA_A0827 [Cupriavidus taiwanensis LMG 19424] gi|193222796|emb|CAQ68799.1| conserved hypothetical protein, putative DNA-binding ATP-binding helicase [Cupriavidus taiwanensis LMG 19424] Length = 1097 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 68/229 (29%), Gaps = 43/229 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS-ASKTVKCLQLANGAVYYDEEKHWKEV------HDE 54 + Y L+ + ++ Q+ + + E Sbjct: 866 RLYE----GALATLREQRDTNPSAQLQALHAIRQICSDPHGFAEAGTRDLAIERLVNESP 921 Query: 55 KIKALEVIIE-----KANAAPIIVAYHFNSDLARLQK----------------AFPQGRT 93 K+ L ++ ++ +IV F LQ+ R Sbjct: 922 KMGWLIERLKALAAERSGNHKVIVFCEFRELQLLLQRVIAAFFGFAPDIVNGDTSADPRV 981 Query: 94 LDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 I + + + P + G G+N+Q N +V F+ W+ + E Sbjct: 982 AHSRQRLIDRFQDQPGFHAIILSPLAVGFGVNIQA-ANHVVHFTRTWNPAK-----EDQA 1035 Query: 153 VTRQRQAGFKRAVFVYY--LIAQN--TIDELVLQRLRTKSTIQDLLLNA 197 R + G R V VYY +I+ + D + L K + +LN Sbjct: 1036 TARAYRIGQTRTVTVYYPGVISAQFPSFDVRLDALLGRKRELAADMLNG 1084 >gi|198429753|ref|XP_002130424.1| PREDICTED: similar to SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Ciona intestinalis] Length = 747 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 66/178 (37%), Gaps = 21/178 (11%) Query: 32 CLQLA--NGAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA 87 L + A+ + + + K+ L+ ++ K+ +++ F + L+ Sbjct: 556 LHNLCLSSRALSTMKLQESSLIDSGKMAHLDEMLPKFKSQNKRVLLFSQFTMMMDILEVY 615 Query: 88 F----------PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + I +N + + + + G G+NL +++V Sbjct: 616 LKLRGHRFLRLDGQTPVQERLSYIDSFNKDDSVFIFLLSTKAGGLGINLTS-ASVVVLHD 674 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + ++ R + G + V V LI+ N+++E + + ++K ++ + Sbjct: 675 IDCNP-----YNDKQAEDRCHRLGQTKKVEVVKLISVNSVEEGMFKTAQSKLQLEKDM 727 >gi|71297047|gb|AAH35183.1| C9orf102 protein [Homo sapiens] gi|119613042|gb|EAW92636.1| RAD26L hypothetical protein, isoform CRA_b [Homo sapiens] Length = 523 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 22/175 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 331 KMKVLQQLLNHCRKNRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 375 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N++V F W+ Sbjct: 376 LDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPAN--- 431 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + R + G R V V LI+ T++E++ R K + +++ + + Sbjct: 432 --DLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGSENAK 484 >gi|311030891|ref|ZP_07708981.1| ATP-dependent RNA helicase [Bacillus sp. m3-13] Length = 565 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 17/155 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQE 103 + K + + +I+K +I+ + + LQ +G ++E Sbjct: 360 NSKAEKVLELIQKVKD-KVIIFTEYRATQMYLQWFLKQNGITSVPFRGGFKRGKKDWMRE 418 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + +L A + G G+NLQ+ N ++ F L W+ +Q I RI + G +R Sbjct: 419 LFKNHVQVLIAT-EAGGEGINLQF-CNHIINFDLPWNPMRLEQRIGRI-----HRLGQER 471 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V +Y NT++E +L+ L K + + ++ L Sbjct: 472 DVNIYNFATNNTVEEHILKLLYEKINLFERVIGEL 506 >gi|296128669|ref|YP_003635919.1| helicase domain protein [Cellulomonas flavigena DSM 20109] gi|296020484|gb|ADG73720.1| helicase domain protein [Cellulomonas flavigena DSM 20109] Length = 737 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 24/201 (11%) Query: 8 QRELYCDLQGENIEAF--NSASKTVKCLQ----LANGAVYYDEEKHWKEVHDEKIKALEV 61 +R +L+ + +A N + + Q LA K V K + Sbjct: 506 RRVAAAELKDSSSKANGENVFTMVRRIGQAKAGLAADYAAQLARNVGKVVFFAKHVDVMD 565 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCG 120 EK A I D +T + + + ++ ++ + G Sbjct: 566 HAEKTFAERGISYTSIRGD-----------QTPRARAKAVAAFTEDPEVQIVVCSLMAAG 614 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ N+++ W D E+ + R + G + V + +IA TID + Sbjct: 615 VGLNLQVASNLVLAELSWTDAEQT------QAIDRIHRIGQEEPVTAWRVIAAQTIDARI 668 Query: 181 LQRLRTKSTIQDLLLNALKKE 201 + + +KS + L+ ++ Sbjct: 669 AELIDSKSGLAARALDGASED 689 >gi|169597871|ref|XP_001792359.1| hypothetical protein SNOG_01727 [Phaeosphaeria nodorum SN15] gi|111070256|gb|EAT91376.1| hypothetical protein SNOG_01727 [Phaeosphaeria nodorum SN15] Length = 861 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 57/171 (33%), Gaps = 17/171 (9%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + + L D +++ +++ P + Y F + Sbjct: 698 SAKVLALLRNL--LTAHTPINDINENYIPAKSVVFSHSTRMLDLIQ--PALSHYQFRT-- 751 Query: 82 ARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +L+ ++E+ + ++ A S G GL+L N + W+ Sbjct: 752 ----CRIDGSTSLEGRSNVLREFSEDAHCAVMLATIGSAGEGLDLTA-ANHVHIIEPHWN 806 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 Q ++RI + G KR VFV I +I+ + + K +Q Sbjct: 807 PMAEAQAVDRI-----YRIGQKREVFVTRYIVPKSIETYIQWVQQQKLKLQ 852 >gi|116191639|ref|XP_001221632.1| hypothetical protein CHGG_05537 [Chaetomium globosum CBS 148.51] gi|88181450|gb|EAQ88918.1| hypothetical protein CHGG_05537 [Chaetomium globosum CBS 148.51] Length = 1040 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 59/187 (31%), Gaps = 25/187 (13%) Query: 32 CLQLANGAVYYDEEKHWK-------EVHDEKIKALEVII--EKANAAPIIVAYHFNSDL- 81 ++ N D K E K+ ++ ++ K ++ L Sbjct: 711 LRKICNHPDLLDPRLKNKPSYAWGDESKSGKMAVVKSLLPMWKRLGHKTLLFCQGVQMLD 770 Query: 82 ----------ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 + + + ++N + ++ + G G+NL G N Sbjct: 771 VIEAFIQRLDNIKYIRMDGKTPVKQRQTLVDQFNTDPELDVFLLTTKVGGLGVNLT-GAN 829 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF-VYYLIAQNTIDE--LVLQRLRTK 187 ++ F W+ Q ER Q++ + ++ L + ++ + +LQ+ + Sbjct: 830 RVIIFDPDWNPSTDVQARERAWRLGQKREQTTFNLNDLHDLFSLSSYEHDRKMLQQEANR 889 Query: 188 STIQDLL 194 Q L Sbjct: 890 IAAQAAL 896 >gi|15079181|ref|NP_149635.1| 172L [Invertebrate iridescent virus 6] gi|82013408|sp|O55764|172L_IIV6 RecName: Full=Putative helicase 172L gi|15042550|gb|AAA62412.2| 172L [Invertebrate iridescent virus 6] Length = 606 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 6/129 (4%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 +++ D + G T ++ Q N+ LF GLNL + Sbjct: 463 LLSEAIKEDYPNFKFVQVDGDTKNRSELFDQFKNDINTQGLFLTYKVGSEGLNLTEATHC 522 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + W + + R + G + V+V+ +I + +I+E +++ + K + Sbjct: 523 ICIEPWWTNA------VHNQAKARLWRTGQTKQVYVHNVIIEGSIEEKIVEICKGKDDMA 576 Query: 192 DLLLNALKK 200 L ++ Sbjct: 577 ASYLEGKER 585 >gi|327298855|ref|XP_003234121.1| DNA repair protein Rad5 [Trichophyton rubrum CBS 118892] gi|326464299|gb|EGD89752.1| DNA repair protein Rad5 [Trichophyton rubrum CBS 118892] Length = 1027 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL N + WW +E + R + G R V V Sbjct: 924 VLLISLRAGGVGLNLT-VANHVFMMDPWWSFA-----VEAQAIDRVHRMGQLRDVKVSRF 977 Query: 171 IAQNTIDELVLQRLRTKSTIQDLL 194 + +N+I+ +L+ K I L Sbjct: 978 VVKNSIEGRILKIQERKMMIAGSL 1001 >gi|261199416|ref|XP_002626109.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] gi|239594317|gb|EEQ76898.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] Length = 1090 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 7/115 (6%) Query: 92 RTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +L + + E+ + I +L A + G GLNL G+ + ++ Q ++R Sbjct: 969 MSLKQRNAALDEFRDNNDITVLLATLGAGGVGLNLTS-GSRVYIMEPQYNPAAIAQAVDR 1027 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + + G R V I +++I+E + + + K + D+ LN + + + Sbjct: 1028 V-----HRLGQTREVTTIQFIMKDSIEEKIAELAKKKQQMADMSLNRSRLDRREL 1077 >gi|167860150|ref|NP_001018610.2| SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Danio rerio] Length = 972 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 17/141 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 K +++ F L ++ + + I ++N +I + Sbjct: 814 KEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAERIGLIDKYNTNPEIFVFL 873 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL N ++ + + ++ R + G R V V LI++ Sbjct: 874 LSTRAGGQGINL-ASANTVILHDIDCNP-----FNDKQAEDRCHRMGQTRTVQVIKLISK 927 Query: 174 NTIDELVLQRLRTKSTIQDLL 194 ++I++ +L+ + K ++ + Sbjct: 928 DSIEDCMLRVGQEKLKLEQDM 948 >gi|169146048|emb|CAQ14040.1| novel protein similar to vertebrate SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 (SMARCAD1, zgc:113183) [Danio rerio] Length = 972 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 53/141 (37%), Gaps = 17/141 (12%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKIPLLF 113 K +++ F L ++ + + I ++N +I + Sbjct: 814 KEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAERIGLIDKYNTNPEIFVFL 873 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NL N ++ + + ++ R + G R V V LI++ Sbjct: 874 LSTRAGGQGINL-ASANTVILHDIDCNP-----FNDKQAEDRCHRMGQTRTVQVIKLISK 927 Query: 174 NTIDELVLQRLRTKSTIQDLL 194 ++I++ +L+ + K ++ + Sbjct: 928 DSIEDCMLRVGQEKLKLEQDM 948 >gi|10436220|dbj|BAB14759.1| unnamed protein product [Homo sapiens] Length = 361 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 61/169 (36%), Gaps = 19/169 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD- 95 + + + K + L I+ + +++ F L L+ + Sbjct: 174 HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL 233 Query: 96 ---------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + I E+N + I + + G G++L N+++ + + Sbjct: 234 RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGIDLTS-ANVVILHDIDCNP---- 288 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ R + G + V V LI+Q TI+E +L+ + K ++ + Sbjct: 289 -YNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDM 336 >gi|189239152|ref|XP_971094.2| PREDICTED: similar to Transcriptional regulator ATRX homolog (ATP-dependent helicase XNP) (X-linked nuclear protein) (dXNP) (d-xnp) [Tribolium castaneum] Length = 1220 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 8/125 (6%) Query: 76 HFNSDLARLQKAFPQGRTLDK-DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 F + + G T + +++N + G GLNL G N ++ Sbjct: 991 QFRNWRPNVDYYRMDGDTSVENRDILCKKFNSNPTSKVFLLTHKVGGLGLNLT-GANRVI 1049 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + + + R + G +R +VY L++ T++E + R K +I Sbjct: 1050 LIGSNHNPSH-----DSQSLYRVYRFGQERKCYVYRLVSLGTMEEKIYHRCVLKLSISGT 1104 Query: 194 LLNAL 198 +++ L Sbjct: 1105 VVDKL 1109 >gi|68065662|ref|XP_674815.1| PfSNF2L [Plasmodium berghei strain ANKA] gi|56493633|emb|CAH95809.1| PfSNF2L, putative [Plasmodium berghei] Length = 714 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL +I++ F ++ + ++ + R + G K+ V VY + Sbjct: 1 LLSTRAGGIGINLTT-ADIVILFDSDYNPQ-----MDIQAMDRAHRIGQKKRVIVYRFVT 54 Query: 173 QNTIDELVLQRLRTKSTIQDLLLN 196 QN+++E +++R K + L++ Sbjct: 55 QNSVEEKIVERAAKKLKLDSLIIQ 78 >gi|313768125|ref|YP_004061556.1| hypothetical protein BpV1_126 [Bathycoccus sp. RCC1105 virus BpV1] gi|312599732|gb|ADQ91753.1| hypothetical protein BpV1_126 [Bathycoccus sp. RCC1105 virus BpV1] Length = 478 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 74/203 (36%), Gaps = 29/203 (14%) Query: 23 FNSASKTVKCLQLANGAVYY--------DEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 ++ Q Y DE + E +K++ L +I + +V Sbjct: 261 MEIFECLLRARQSMIYPQMYINGIAKKRDEIPEFWEGRSKKMETLFKLISEHPDEKTLVF 320 Query: 75 YHFNSDLARLQKAFPQ-------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQ 126 F ++ +++ + + ++ +N + + + G GLN+Q Sbjct: 321 CQFKQEMDYIRENLTCPVFRIDGSVSKEDREKQLKLFNEAPQNSVFLIQVKAGGQGLNIQ 380 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-----IDELVL 181 + + F + W+ + R ++G KR V+V L+ +T +++ ++ Sbjct: 381 -CASRIYFTAPCWNPATEL-----QAIGRAHRSGQKRKVYVKKLVYSDTPGYPSVEQAMI 434 Query: 182 QRLRTKSTIQDLLL--NALKKET 202 KS + +L + LKK+ Sbjct: 435 ALQGHKSLLSAEVLRDDRLKKQI 457 >gi|123415533|ref|XP_001304706.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] gi|121886177|gb|EAX91776.1| SNF2 family N-terminal domain containing protein [Trichomonas vaginalis G3] Length = 572 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 6/100 (6%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E L A + HG+NL +I++FF L W+ I+ R Sbjct: 429 KKIEEFSKEDGPDLFIATTTAAAHGINLTS-ASIVIFFELNWNP-----KIDLQAEDRVH 482 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + V ++ ++ +TID+ +++ K I + +++ Sbjct: 483 RLTQTKTVDIFKIVMIDTIDQRIIEAQERKDKIANGVIHD 522 >gi|71422266|ref|XP_812080.1| SNF2 DNA repair protein [Trypanosoma cruzi strain CL Brener] gi|122021396|sp|Q4DCH3|JBP2_TRYCR RecName: Full=Bifunctional helicase and thymine dioxygenase JBP2; AltName: Full=J-binding protein 2; Includes: RecName: Full=Probable DNA helicase JBP2; Includes: RecName: Full=Thymine dioxygenase JBP2 gi|70876818|gb|EAN90229.1| SNF2 DNA repair protein, putative [Trypanosoma cruzi] Length = 1086 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 56/156 (35%), Gaps = 12/156 (7%) Query: 51 VHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 +H + K + II + + ++ S + + + + KI Sbjct: 888 LHSIREKKEKAIIFSQYVGSQDFISRTLTSFDIVSSTIRGRDCHERRRRTIEKFREDEKI 947 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L +GL+ N ++ + WW+ + +E + R + RAV VY Sbjct: 948 TCLLLSTQIGAYGLDFTA-ANHVILWDSWWNPQ-----VESQAIARAYRRNQTRAVIVYR 1001 Query: 170 LIA--QNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L + ++TI VL+ K + ++N + Sbjct: 1002 LASEFEDTI---VLKTQIRKLALFRCIMNEEASRAV 1034 >gi|327355140|gb|EGE83997.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ATCC 18188] Length = 1091 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 72/216 (33%), Gaps = 26/216 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + Q + ++ + K Q Y K + + +E Sbjct: 875 YSAITCRGFEKFQASQLSTRHNLKQAKKFGQ------YEGPHTKTKALISHLLDTVEESK 928 Query: 64 --EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWNEGK-I 109 +V + S L ++ +L + + E+ + I Sbjct: 929 KAPDEPPIKSVVFSSWTSHLDLIEIALEDNGITTFTRLDGTMSLKQRNAALDEFRDNNDI 988 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G GLNL G+ + ++ Q ++R+ + G R V Sbjct: 989 TVLLATLGAGGVGLNLTS-GSRVYIMEPQYNPAAIAQAVDRV-----HRLGQTREVTTIQ 1042 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I +++I+E + + + K + D+ LN + + + Sbjct: 1043 FIMKDSIEEKIAELAKKKQQMADMSLNRSRLDRREL 1078 >gi|315446159|ref|YP_004079038.1| DNA/RNA helicase, superfamily II, SNF2 family [Mycobacterium sp. Spyr1] gi|315264462|gb|ADU01204.1| DNA/RNA helicase, superfamily II, SNF2 family [Mycobacterium sp. Spyr1] Length = 1124 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 64/166 (38%), Gaps = 17/166 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF--------NSDLARLQKAF 88 + + + + K++ L I+E+ N ++V HF R+ Sbjct: 680 FMAMRQAGMRQGRNSTKMQRLIEIVEEAEDNGRRVVVFSHFLDVLNDVARHMPGRVFGPL 739 Query: 89 PQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ + +++ + +L A + G GLN+Q +++V Sbjct: 740 TGSVAANQRQVLVDDFSAAQKGAVLVAQIVAGGVGLNIQA-ASVVVICEPQLKPTT---- 794 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 E + R + G +V V+ L++ +D+ V + L TK ++ + Sbjct: 795 -EWQAIARAHRMGQLESVQVHRLLSDEGVDQRVREILATKKSLFES 839 >gi|307564877|ref|ZP_07627402.1| SNF2 family N-terminal domain protein [Prevotella amnii CRIS 21A-A] gi|307346413|gb|EFN91725.1| SNF2 family N-terminal domain protein [Prevotella amnii CRIS 21A-A] Length = 477 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 15/154 (9%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------PCTIQEW 104 KI I + +IV + + L K FP+ T+ + + Sbjct: 309 KGKIAQAIDFISTFLESGKKLIVFCSLHEIVDELCKTFPKAVTVTGRDSAVNKQAAVDAF 368 Query: 105 NEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 G L+ + G GL L + + F L W + + Q +R + G Sbjct: 369 QTGENTRLIICSIKAAGVGLTLTA-ASDVAFCELPWTMADCCQCEDR-----AHRIGQND 422 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V YYL+ + TID + ++ K +I ++N+ Sbjct: 423 NVNCYYLLGRGTIDNTIYSLIQRKKSIAKEIMNS 456 >gi|225558413|gb|EEH06697.1| DNA repair helicase rad5,16 [Ajellomyces capsulatus G186AR] Length = 1118 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 7/107 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + I+E+ + I +L + G GL+L N + LWW+ + IE+ Sbjct: 832 MPIRQREKCIEEFSKDPAIRILVCSLRTAGTGLDLTA-ANKCILVDLWWN-----EAIEQ 885 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + KR V ++ +N+ID+ + KS D +L + Sbjct: 886 QAFFRLFRINQKRKVEFVRVVVRNSIDDRLQLIQEDKSNNIDRVLGS 932 >gi|270010822|gb|EFA07270.1| hypothetical protein TcasGA2_TC013301 [Tribolium castaneum] Length = 1294 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 8/125 (6%) Query: 76 HFNSDLARLQKAFPQGRTLDK-DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILV 133 F + + G T + +++N + G GLNL G N ++ Sbjct: 1065 QFRNWRPNVDYYRMDGDTSVENRDILCKKFNSNPTSKVFLLTHKVGGLGLNLT-GANRVI 1123 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + + + R + G +R +VY L++ T++E + R K +I Sbjct: 1124 LIGSNHNPSH-----DSQSLYRVYRFGQERKCYVYRLVSLGTMEEKIYHRCVLKLSISGT 1178 Query: 194 LLNAL 198 +++ L Sbjct: 1179 VVDKL 1183 >gi|145497571|ref|XP_001434774.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124401902|emb|CAK67377.1| unnamed protein product [Paramecium tetraurelia] Length = 954 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ +I+++ E +I ++ + +G+NL N ++ WW+ +E Sbjct: 832 MDKNQRKASIKDFFEKQITVMLISLKAGAYGINL-SCANHVLLVDPWWNPA-----VEDQ 885 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V R + G ++ V + I NTI+E VLQ + K + L Sbjct: 886 AVERVHRLGQQKQVQIVSFICDNTIEERVLQMHKMKRQLFKDALQ 930 >gi|861466|gb|AAB33905.1| DNA helicase homolog [Invertebrate iridescent virus 6] Length = 606 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 6/123 (4%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D + G T ++ Q N+ LF GLNL + + Sbjct: 469 KEDYPNFKFVQVDGDTKNRSELFDQFKNDINTQGLFLTYKVGSEGLNLTEATHCICIEPW 528 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W + + R + G + V+V+ +I + +I+E +++ + K + L Sbjct: 529 WTNA------VHNQAKARLWRTGQTKQVYVHNVIIEGSIEEKIVEICKGKDDMAASYLEG 582 Query: 198 LKK 200 ++ Sbjct: 583 KER 585 >gi|42569958|ref|NP_182126.2| transcription regulatory protein SNF2, putative [Arabidopsis thaliana] gi|330255539|gb|AEC10633.1| ATP-dependent helicase BRM [Arabidopsis thaliana] Length = 2192 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 71/229 (31%), Gaps = 60/229 (26%) Query: 30 VKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 ++ + N + + K+ L+ I+ K +++ L Sbjct: 1278 MELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLD 1337 Query: 83 RLQKAFPQGRTLDKD----------PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGN 130 L++ R + + I ++N+ + + G GLNLQ + Sbjct: 1338 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQT-AD 1396 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQ--------------- 173 +V + + + E V R + G R V V Y+ + + Sbjct: 1397 TVVIYDPDPNPKN-----EEQAVARAHRIGQTREVKVIYMEAVVEKLSSHQKEDELRSGG 1451 Query: 174 ---------------NTIDELVL-QRLRTKSTIQDLLLNALK--KETIH 204 +I+ L+ + K + D ++NA + + T H Sbjct: 1452 SVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTH 1500 >gi|291164804|gb|ADD80834.1| helicase [Rhodococcus phage ReqiDocB7] Length = 500 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 26/217 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y + EL D + +A N +K ++ Q+ E+ K + + + Sbjct: 264 KLYDQVATELLLDTGSGDPDAIENPMTKFLRLKQICGTTASVREDGLDKSAKLD-LATED 322 Query: 61 VIIEKANAAPIIVAYHFNSDLARL---------------------QKAFPQGRTLDKDPC 99 + N I+V F S L A D+ Sbjct: 323 AVEICENGHKIVVFTQFRSVLHCYIDRLNVALANVPVNGKATQVPVFALHGDVPNDQRQG 382 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++EW P + F + +QQ ++R+ Q Sbjct: 383 IVKEWAAVDGPAVIVCMTQVAGIGLNMTAARHGQFLDKLFVPLLNQQAVDRMNRIGQ--- 439 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++V ++ A++T++ V L+ K + + ++ Sbjct: 440 STTQSVQIFDYQARDTVESRVESILKVKKNLFENIVE 476 >gi|196002339|ref|XP_002111037.1| hypothetical protein TRIADDRAFT_54568 [Trichoplax adhaerens] gi|190586988|gb|EDV27041.1| hypothetical protein TRIADDRAFT_54568 [Trichoplax adhaerens] Length = 1562 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 67/218 (30%), Gaps = 43/218 (19%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------HDE 54 + Y + G + ++ + N A E+ + Sbjct: 664 RNYKALSK-------GAKGSLGGFINIMMELKKCCNHASLVKMEEKNNKDAIQSLLRGSG 716 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQ 102 K+ L+ ++ K +++ L L + L + + Sbjct: 717 KMILLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQIKHFLFQRLDGSIRGDLRKQALD 776 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G GLNL + ++ F W+ + + +R + G Sbjct: 777 HFNADGSQDFCFLLSTRAGGLGLNL-ASADTVIIFDSDWNPQN-----DIQAQSRAHRIG 830 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 ++ QN+++E +++R K + L++ + Sbjct: 831 QRK---------QNSVEEEIIERATKKMVLDHLVIQRM 859 >gi|301630532|ref|XP_002944371.1| PREDICTED: transcription termination factor 2-like [Xenopus (Silurana) tropicalis] Length = 143 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 40/119 (33%), Gaps = 8/119 (6%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++++N ++ G GGN L + Sbjct: 12 IGLSYATIDGSVNPKQRMDMVEDFNNNPKGPQVMLVSL-CAGGVGLNLVGGNHLFLLDMH 70 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ Q +RI + G ++ V ++ + T++E + Q K + +L+ Sbjct: 71 WNPALEDQACDRI-----YRVGQQKDVVIHRFVCLGTVEEKISQLQEKKKDLAKKVLSG 124 >gi|308494324|ref|XP_003109351.1| hypothetical protein CRE_08005 [Caenorhabditis remanei] gi|308246764|gb|EFO90716.1| hypothetical protein CRE_08005 [Caenorhabditis remanei] Length = 880 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 9/110 (8%) Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 P I+++ + I + + G GLNL N ++ F W+ + + R Sbjct: 492 RPKIIKKFEEDADIKVFLMTTRAGGLGLNLT-CANKVIIFDPDWNPQA-----DNQAKNR 545 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G + V + LI+ T+++ + K + LL+ + HV Sbjct: 546 IYRMGQENDVSIVRLISNGTLEDRKFFKQVQKEMLAAQLLH--NADVEHV 593 >gi|42571243|ref|NP_973695.1| transcription regulatory protein SNF2, putative [Arabidopsis thaliana] gi|75122353|sp|Q6EVK6|BRM_ARATH RecName: Full=ATP-dependent helicase BRM; Short=AtBRM; AltName: Full=Protein BRAHMA gi|49658966|emb|CAG28313.1| putative SNF2 subfamily ATPase [Arabidopsis thaliana] gi|330255538|gb|AEC10632.1| ATP-dependent helicase BRM [Arabidopsis thaliana] Length = 2193 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 71/229 (31%), Gaps = 60/229 (26%) Query: 30 VKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 ++ + N + + K+ L+ I+ K +++ L Sbjct: 1279 MELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLD 1338 Query: 83 RLQKAFPQGRTLDKD----------PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGN 130 L++ R + + I ++N+ + + G GLNLQ + Sbjct: 1339 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQT-AD 1397 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQ--------------- 173 +V + + + E V R + G R V V Y+ + + Sbjct: 1398 TVVIYDPDPNPKN-----EEQAVARAHRIGQTREVKVIYMEAVVEKLSSHQKEDELRSGG 1452 Query: 174 ---------------NTIDELVL-QRLRTKSTIQDLLLNALK--KETIH 204 +I+ L+ + K + D ++NA + + T H Sbjct: 1453 SVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTH 1501 >gi|302831510|ref|XP_002947320.1| hypothetical protein VOLCADRAFT_103414 [Volvox carteri f. nagariensis] gi|300267184|gb|EFJ51368.1| hypothetical protein VOLCADRAFT_103414 [Volvox carteri f. nagariensis] Length = 986 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 72/203 (35%), Gaps = 21/203 (10%) Query: 6 KFQREL--YCDLQGENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K +REL + + A + + Q + + + Sbjct: 641 KMKRELEGIRAVANSMMSAGGASGLAGVSHEQQQT---IMRLWRDTAEIKKTAVAEYCSD 697 Query: 62 IIEKANAAPIIVAYHFN------SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFA 114 ++ +A+ A ++ H L G + D ++++ + + + Sbjct: 698 LL-EADGAKFLLFAHHKVLLDAVKSLKARYIRIDGGTSGDDRGRLVKQFQEDADVKVAIL 756 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G GL + +++VF L W + Q R + G +V +++L+ + Sbjct: 757 SIKAAGVGLTMTA-SSLVVFAELSWVPGDIQ-----QAEDRCHRIGQHTSVNIHFLLVRG 810 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 +IDEL+ L+ K + +L+ Sbjct: 811 SIDELMWDTLQNKLSDVGKVLDG 833 >gi|169826381|ref|YP_001696539.1| ATP-dependent helicase yqhH [Lysinibacillus sphaericus C3-41] gi|168990869|gb|ACA38409.1| Hypothetical ATP-dependent helicase yqhH [Lysinibacillus sphaericus C3-41] Length = 504 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 8/139 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A I + F K + E + +L A + G Sbjct: 365 IIFTEYRATQIYLQWYLHSKGISSVLFNGKFNKSKRDYMKHLFKE-RAQVLIAT-EAGGE 422 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ + ++ + L W+ + +Q I R+ + G + V +Y L ++TI+E +L Sbjct: 423 GINLQF-CHHVINYDLPWNPMKLEQRIGRV-----HRLGQEHDVHIYNLAIEDTIEEKIL 476 Query: 182 QRLRTKSTIQDLLLNALKK 200 + L TK + + ++ L Sbjct: 477 ELLHTKIDVFEKVVGDLDA 495 >gi|297824661|ref|XP_002880213.1| ATBRM/CHR2 [Arabidopsis lyrata subsp. lyrata] gi|297326052|gb|EFH56472.1| ATBRM/CHR2 [Arabidopsis lyrata subsp. lyrata] Length = 2186 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 71/229 (31%), Gaps = 60/229 (26%) Query: 30 VKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 ++ + N + + K+ L+ I+ K +++ L Sbjct: 1272 MELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLD 1331 Query: 83 RLQKAFPQGRTLDKD----------PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGN 130 L++ R + + I ++N+ + + G GLNLQ + Sbjct: 1332 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQT-AD 1390 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQ--------------- 173 +V + + + E V R + G R V V Y+ + + Sbjct: 1391 TVVIYDPDPNPKN-----EEQAVARAHRIGQTREVKVIYMEAVVEKISSHQKEDELRSGG 1445 Query: 174 ---------------NTIDELVL-QRLRTKSTIQDLLLNALK--KETIH 204 +I+ L+ + K + D ++NA + + T H Sbjct: 1446 SIDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTH 1494 >gi|85085493|ref|XP_957522.1| hypothetical protein NCU04445 [Neurospora crassa OR74A] gi|28918614|gb|EAA28286.1| predicted protein [Neurospora crassa OR74A] Length = 1139 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEK----ANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDK 96 K L+ II + A IIV H+ + F + Sbjct: 912 PSAKTTRLKDIILEWQKDAPDDKIIVFTHWILLGRILGRVLQQEKIDFLYLFGGMGPTVR 971 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I +L + G LNL N +V WW+ +E+ R Sbjct: 972 EDQIKAFQTNPRIKVLVSSLRVGGQSLNL-AAANRVVILDAWWNNG-----MEKQAFGRV 1025 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ + ++A+NTID+ ++ K + Sbjct: 1026 FRFGQKKESWFTRILAKNTIDKRIIDLQEDKLKAISKAIQ 1065 >gi|71028160|ref|XP_763723.1| hypothetical protein [Theileria parva strain Muguga] gi|68350677|gb|EAN31440.1| hypothetical protein, conserved [Theileria parva] Length = 845 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 19/164 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQK----------- 86 V K++ + I+ +++ F + L +Q Sbjct: 682 VLISRVPEELYFESTKVQKMLEILSNIMERNEKVLIFSQFTNYLDIIQHVLRLREITPVL 741 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +L I +N + +L GLNL N ++ W+ Sbjct: 742 RLDGTVSLTDRDTIINTFNTDAVSILLISVKVGNVGLNL-SVANNVILMDQSWNP----- 795 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G ++ V +Y L ++TI+E ++ + K + Sbjct: 796 YNDIQAEDRCHRIGQQKIVNIYKLFVKDTIEEYIIVKSHNKLHL 839 >gi|52080994|ref|YP_079785.1| DEAD/DEAH box helicase YqhH [Bacillus licheniformis ATCC 14580] gi|319645048|ref|ZP_07999281.1| YqhH protein [Bacillus sp. BT1B_CT2] gi|52004205|gb|AAU24147.1| DEAD/DEAH box helicase YqhH [Bacillus licheniformis ATCC 14580] gi|317392857|gb|EFV73651.1| YqhH protein [Bacillus sp. BT1B_CT2] Length = 559 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A I F F G K + GK+ +L A + G Sbjct: 376 IIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFR-GKVQVLIAT-EAGGE 433 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ N ++ + L W+ +Q I RI + G +R V++Y + ++T++E +L Sbjct: 434 GINLQF-CNKIINYDLPWNPMRLEQRIGRI-----HRLGQERDVYIYNMATKHTVEEHIL 487 Query: 182 QRLRTKSTIQDLLLNAL 198 + L K + + ++ L Sbjct: 488 KLLYEKIHLFEKVVGDL 504 >gi|126651081|ref|ZP_01723292.1| helicase (Snf2/Rad54 family) protein [Bacillus sp. B14905] gi|126592282|gb|EAZ86331.1| helicase (Snf2/Rad54 family) protein [Bacillus sp. B14905] Length = 504 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 8/139 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A I + F K + E + +L A + G Sbjct: 365 IIFTEYRATQIYLQWYLHSKGITSVLFNGKFNKSKRDYMKHLFKE-RAQVLIAT-EAGGE 422 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ + ++ + L W+ + +Q I R+ + G + V +Y L +NTI+E +L Sbjct: 423 GINLQF-CHHVINYDLPWNPMKLEQRIGRV-----HRLGQEHDVHIYNLAIENTIEEKIL 476 Query: 182 QRLRTKSTIQDLLLNALKK 200 + L TK + + ++ L Sbjct: 477 ELLHTKIDVFEKVVGDLDA 495 >gi|73998078|ref|XP_859390.1| PREDICTED: similar to helicase, lymphoid-specific isoform 7 [Canis familiaris] Length = 812 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 52/190 (27%), Gaps = 52/190 (27%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 563 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKARGHKVLLFSQ 622 Query: 77 FNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 L L + + + +N +F +P S Sbjct: 623 MTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPDVFIFLNPQS-------- 674 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + R + G + V VY L+ NTID+ +++R Sbjct: 675 ----------------------DLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAA 712 Query: 187 KSTIQDLLLN 196 K ++ L+++ Sbjct: 713 KRKLEKLIIH 722 >gi|71662347|ref|XP_818182.1| SNF2 DNA repair protein [Trypanosoma cruzi strain CL Brener] gi|70883417|gb|EAN96331.1| SNF2 DNA repair protein, putative [Trypanosoma cruzi] Length = 986 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 55/156 (35%), Gaps = 12/156 (7%) Query: 51 VHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 +H + K + II + + ++ S + + + + I Sbjct: 788 LHSIREKKEKAIIFSQYVGSQDFISRTLTSFDIVSSTIRGRDCHERRRRTIEKFREDENI 847 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 L +GL+ N ++ + WW+ + +E + R + RAV VY Sbjct: 848 TCLLLSTQIGAYGLDFTA-ANHVILWDSWWNPQ-----VESQAIARAYRRNQTRAVIVYR 901 Query: 170 LIA--QNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 L + ++TI VL+ K + ++N + Sbjct: 902 LASEFEDTI---VLKTQIRKLALFRCIMNEEASRAV 934 >gi|17538806|ref|NP_501545.1| RADiation sensitivity abnormal/yeast RAD-related family member (rad-26) [Caenorhabditis elegans] gi|3874525|emb|CAA90984.1| C. elegans protein C27B7.4, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 1274 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 7/119 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + R + I +N E + L + G+NL N + Sbjct: 829 EKNRNYLRLDGTTSGADREKLINRFNSEPGLSLFLISTRAGSLGINLVS-ANRCIIIDAC 887 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ + V R + G ++ FVY LI N+++ + R +K +Q +++ Sbjct: 888 WNP-----CHDAQAVCRVYRYGQQKKTFVYRLIMDNSMERSIFNRQISKHGLQQRVVDD 941 >gi|52786371|ref|YP_092200.1| YqhH [Bacillus licheniformis ATCC 14580] gi|52348873|gb|AAU41507.1| YqhH [Bacillus licheniformis ATCC 14580] Length = 561 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A I F F G K + GK+ +L A + G Sbjct: 378 IIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFR-GKVQVLIAT-EAGGE 435 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ N ++ + L W+ +Q I RI + G +R V++Y + ++T++E +L Sbjct: 436 GINLQF-CNKIINYDLPWNPMRLEQRIGRI-----HRLGQERDVYIYNMATKHTVEEHIL 489 Query: 182 QRLRTKSTIQDLLLNAL 198 + L K + + ++ L Sbjct: 490 KLLYEKIHLFEKVVGDL 506 >gi|322826005|gb|EFZ30802.1| helicase-like protein, putative [Trypanosoma cruzi] Length = 1090 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 56/150 (37%), Gaps = 13/150 (8%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ----GRTLDKDPCTIQEWNE-GKIPLLFAH 115 ++ + + D + + + + T++ +N +L Sbjct: 687 KMLSLFEGIIAEMNRRWQQDGSLPRPIRFCRLDGNSSGAERENTLRSFNSLRGADVLLLS 746 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+N+ ++ ++ + +R + R + G R VFVY L+ T Sbjct: 747 MKAGGVGINITS-ATRVILADSGFNPAD-----DRQAIGRAYRYGQTRPVFVYRLVCYQT 800 Query: 176 IDELVLQRLRTKSTIQDLLLN--ALKKETI 203 ++ + Q+ K + ++ +LK++ + Sbjct: 801 LEHRMFQQKVAKEWLFHTIVEEASLKRDAL 830 >gi|290989143|ref|XP_002677202.1| predicted protein [Naegleria gruberi] gi|284090808|gb|EFC44458.1| predicted protein [Naegleria gruberi] Length = 1068 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 55/155 (35%), Gaps = 20/155 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT-------- 93 E K + ++ ++EK + +++ + L + Sbjct: 753 EPIENILAKSTKAQMIKQLVEKSIDDGHKVLIFSQYTRMLDIIGVILKSMNIKYNRIDGS 812 Query: 94 ---LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + +N + I + G GLNL + ++ ++ I+ Sbjct: 813 VTKYQERLSLVDSFNQKKNIKCFLLSSQAGGVGLNLTA-ASRVIIVEPNFNPS-----ID 866 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 + R + G ++ V VY LI +TI+E + +RL Sbjct: 867 EQAIDRAYRIGQRQNVIVYRLICSSTIEEYIYKRL 901 >gi|312086053|ref|XP_003144925.1| hypothetical protein LOAG_09349 [Loa loa] gi|307759908|gb|EFO19142.1| hypothetical protein LOAG_09349 [Loa loa] Length = 223 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%) Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 A+ G GLNL G + ++ F W+ Q++ RI + G K +Y LI Sbjct: 1 MSSATGGLGLNL-VGASRMILFDSDWNPAVDMQVMARIW-----RQGQKSPCHIYRLITG 54 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 T+DE +LQR KS++ + ++ + E Sbjct: 55 GTVDEKILQRQIKKSSL-NTVVEMIPAE 81 >gi|116194784|ref|XP_001223204.1| hypothetical protein CHGG_03990 [Chaetomium globosum CBS 148.51] gi|88179903|gb|EAQ87371.1| hypothetical protein CHGG_03990 [Chaetomium globosum CBS 148.51] Length = 1140 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 10/160 (6%) Query: 47 HWKEVHDEKIKALEVIIEKANAAP--IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW 104 + + +K + II N A I+ + F K+ + Sbjct: 957 KNQILKWQKEAPDDKIIVFVNWAKLACIIGRMLQEEKIPFLYYFGDLTKDQKEAAILNFQ 1016 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + I +L A G LNL N ++ WW+ + +E R + G ++ Sbjct: 1017 EKPNIKVLIASARCGGQALNL-NFANRVISVDQWWN-----RAMEDQAFGRVHRIGQQKE 1070 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA--LKKET 202 + +I +++IDE++L K + ++E Sbjct: 1071 TYFTKIIVRDSIDEMLLNTQDAKEKRISDVFKEGVDRREM 1110 >gi|171679747|ref|XP_001904820.1| hypothetical protein [Podospora anserina S mat+] gi|170939499|emb|CAP64727.1| unnamed protein product [Podospora anserina S mat+] Length = 1563 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 57/161 (35%), Gaps = 35/161 (21%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKA 87 + LQ G K++AL+ ++ + + ++ L L++ Sbjct: 1425 KRLLQYDCG----------------KLQALDKLLRRLHAGGHRALIFTQMTKVLDILEQF 1468 Query: 88 FPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + +N + +I S G G+NL G + ++F+ Sbjct: 1469 LNIHGHKYLRLDGATKVEQRQILTDRFNHDTRITCFILSTRSGGLGINLT-GADTVIFYD 1527 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 W+ +++ R + G R V +Y L++++T + Sbjct: 1528 QDWNPA-----MDKQCQDRAHRIGQTRDVHIYRLVSEHTCE 1563 >gi|153006150|ref|YP_001380475.1| non-specific serine/threonine protein kinase [Anaeromyxobacter sp. Fw109-5] gi|152029723|gb|ABS27491.1| Non-specific serine/threonine protein kinase [Anaeromyxobacter sp. Fw109-5] Length = 1002 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 64/184 (34%), Gaps = 21/184 (11%) Query: 28 KTVKCLQ---LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 + ++ Q +A A ++K ++++ L I + ++V + A Sbjct: 581 RLMRAFQRMRMACDAAGLVDKKTRGAPKLDELERLLEEICLGDRRKVVVFSEWERMQAMA 640 Query: 85 QKAF----------PQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILV 133 + G I + + + + + G GLNLQ + +V Sbjct: 641 AELCERLGVGHVRLHGGVPSAARGALIDRFRDDPECRVFL-STDAGGVGLNLQA-ASHVV 698 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 L W+ Q I R+ + G + AV V L+++ + +E + L K + Sbjct: 699 NLDLPWNPAVLAQRIARV-----HRLGQREAVNVVLLVSEGSFEERLEATLDGKRALFAA 753 Query: 194 LLNA 197 + Sbjct: 754 AVGD 757 >gi|262405856|ref|ZP_06082406.1| helicase [Bacteroides sp. 2_1_22] gi|262356731|gb|EEZ05821.1| helicase [Bacteroides sp. 2_1_22] Length = 801 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 28 KTVKCLQLA--NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD----- 80 + Q+ + Y ++K + E+ + + ++ +++ + Sbjct: 461 LLLMLSQMRMLCDSTYILDQKTRYDTKVEETLNILRNVFESGDEKVVIFSQWERMTRLIA 520 Query: 81 -----LARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 L + G + + E + + + GLNLQ +IL+ Sbjct: 521 KELDVLGVRYEYLHGGIPSEARKNLTDNFTELPESRVFL-STDAGSTGLNLQ-VASILIN 578 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 L W+ +Q I RI + G K+ + V L+A TI+E +L L K+++ + + Sbjct: 579 LDLPWNPAVLEQRIARI-----YRIGQKKNIQVINLVASQTIEERMLSTLNFKTSLFEGI 633 Query: 195 LN 196 L+ Sbjct: 634 LD 635 >gi|25028310|ref|NP_738364.1| hypothetical protein CE1754 [Corynebacterium efficiens YS-314] gi|259507368|ref|ZP_05750268.1| SNF2 family superfamily II DNA/RNA helicase [Corynebacterium efficiens YS-314] gi|23493595|dbj|BAC18564.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165079|gb|EEW49633.1| SNF2 family superfamily II DNA/RNA helicase [Corynebacterium efficiens YS-314] Length = 886 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 17/151 (11%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLA--------RLQKAFPQGRTLDKDPCTIQ 102 K+K + ++++ + ++ F L R+ + + Sbjct: 704 SAKMKRIIELLDEAEEHGRKTLIFTFFLDILDELEHVLGARVIGRIDGSVPAARRQELVD 763 Query: 103 EWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + L + + G GLN+Q + ++ Q V R + G Sbjct: 764 ALADAPAGSALISQITAGGVGLNIQS-ASQVIICEPQVKPTIEQ-----QAVARVHRMGQ 817 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V V+ LI +T DE +L+ L K+ I D Sbjct: 818 TATVNVHRLIGDDTADERMLEILAGKTQIFD 848 >gi|307566197|ref|ZP_07628648.1| SNF2 family N-terminal domain protein [Prevotella amnii CRIS 21A-A] gi|307345090|gb|EFN90476.1| SNF2 family N-terminal domain protein [Prevotella amnii CRIS 21A-A] Length = 1090 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 37/225 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKI 56 + Y + Q Q+ + + ++ K+ Sbjct: 702 RLYRDELNAVVATRQSRKTPQGMMFKVITAFRQICDSPYLSVVDYSQIDIDKLINSSSKL 761 Query: 57 KALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP--------------------QGRTL 94 I++K N +I+ L+ Q + L Sbjct: 762 SVTINILDKIRKNNEKVIIFTDHKDTQRLLRNVVFRRYDLDISIINGETPATAKVQSQKL 821 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + N ++ P + G GLN+ G N ++ +S +W+ + Q Sbjct: 822 SRQQTVDNFQNAEGFNIIIMSPLAAGMGLNIT-GANNVIHYSRFWNPAKEQ-----QATD 875 Query: 155 RQRQAGFKRAVFVYYL--IAQN--TIDELVLQRLRTKSTIQDLLL 195 R + G K+ V VYY ++++ T D ++ L K+ + D L Sbjct: 876 RAYRIGQKKDVNVYYPMSVSKDFRTFDVIIDALLAKKAELADATL 920 >gi|299537022|ref|ZP_07050327.1| ATP-dependent helicase yqhH [Lysinibacillus fusiformis ZC1] gi|298727602|gb|EFI68172.1| ATP-dependent helicase yqhH [Lysinibacillus fusiformis ZC1] Length = 502 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 8/146 (5%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 K +VII A I + F K + E + +L A Sbjct: 356 KQANDKVIIFTEYRATQIYLQWYLHSNGISSVLFNGKFNKSKRDYMKHLFKE-RAQVLIA 414 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G+NLQ+ + ++ + L W+ + +Q I R+ + G + V +Y L ++ Sbjct: 415 T-EAGGEGINLQF-CHHVINYDLPWNPMKLEQRIGRV-----HRLGQEHDVHIYNLAIEH 467 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKK 200 TI+E +L+ L TK + + ++ L Sbjct: 468 TIEEKILELLHTKIDVFEKVVGDLDA 493 >gi|294806211|ref|ZP_06765058.1| SNF2 family N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] gi|294446467|gb|EFG15087.1| SNF2 family N-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 827 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 28 KTVKCLQLA--NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD----- 80 + Q+ + Y ++K + E+ + + ++ +++ + Sbjct: 487 LLLMLSQMRMLCDSTYILDQKTRYDTKVEETLNILRNVFESGDEKVVIFSQWERMTRLIA 546 Query: 81 -----LARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 L + G + + E + + + GLNLQ +IL+ Sbjct: 547 KELDVLGVRYEYLHGGIPSEARKNLTDNFTELPESRVFL-STDAGSTGLNLQ-VASILIN 604 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 L W+ +Q I RI + G K+ + V L+A TI+E +L L K+++ + + Sbjct: 605 LDLPWNPAVLEQRIARI-----YRIGQKKNIQVINLVASQTIEERMLSTLNFKTSLFEGI 659 Query: 195 LN 196 L+ Sbjct: 660 LD 661 >gi|325094197|gb|EGC47507.1| DNA repair helicase rad5,16 [Ajellomyces capsulatus H88] Length = 1113 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 7/107 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + +I+E+ + I +L + G GL+L N + LWW+ + IE+ Sbjct: 833 MPIRQREKSIEEFSKDPAIRILVCSLRTAGTGLDLTA-ANKCILVDLWWN-----EAIEQ 886 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + KR V ++ +N+ID+ + KS D +L + Sbjct: 887 QAFFRLFRINQKRKVEFVRVVVRNSIDDRLQLIQEDKSNNIDRVLGS 933 >gi|119181856|ref|XP_001242107.1| hypothetical protein CIMG_06003 [Coccidioides immitis RS] Length = 2054 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 63/167 (37%), Gaps = 22/167 (13%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYH------FNSDL----ARLQKAFPQGRTLDKDPC 99 H + L+ II++ +++ H + D+ + Sbjct: 1370 HSHRAAMLDQIIKQSVNAGDKVLIFSHSIPTLNYIEDVLKVNRWRYCRLDGTTPITSRQS 1429 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + + + G GLN+ G N +V F ++ E V R Sbjct: 1430 ATKSFNKIDSPMQVYLISTKAGGLGLNI-PGANRVVIFDFAFNPT-----WEEQAVGRAY 1483 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G ++ VFVY IA T ++++ + K+ + +++ KK I Sbjct: 1484 RFGQRKPVFVYRFIAGGTYEDIMYNKTVFKTQLSFRVVD--KKNPIR 1528 >gi|40882176|emb|CAF06002.1| related to protein RIS1 [Neurospora crassa] Length = 1226 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 21/160 (13%) Query: 52 HDEKIKALEVIIEK----ANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDK 96 K L+ II + A IIV H+ + F + Sbjct: 999 PSAKTTRLKDIILEWQKDAPDDKIIVFTHWILLGRILGRVLQQEKIDFLYLFGGMGPTVR 1058 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I +L + G LNL N +V WW+ +E+ R Sbjct: 1059 EDQIKAFQTNPRIKVLVSSLRVGGQSLNL-AAANRVVILDAWWNNG-----MEKQAFGRV 1112 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G K+ + ++A+NTID+ ++ K + Sbjct: 1113 FRFGQKKESWFTRILAKNTIDKRIIDLQEDKLKAISKAIQ 1152 >gi|281210112|gb|EFA84280.1| hypothetical protein PPL_03357 [Polysphondylium pallidum PN500] Length = 1494 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 20/180 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 G + E E K+ + I +V H L L+++ T Sbjct: 861 GNSHLPELHVLLESGRAKLPGAQDYIVGLVKENKKFLVFAHHTDILDGLERSIKSTGTGY 920 Query: 96 -----------KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + N K + + G GL L +++VF L+W Sbjct: 921 MRIDGSTPAEARQTYVTRFQNSDKCRVALLSITAAGTGLTLTA-SSLVVFVELYWTPGVL 979 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R R + G + V ++YLI +NT+D+ + + K + L+ ++E +H Sbjct: 980 -----RQAEDRVHRIGQREDVHIHYLIGKNTLDDKMWPTICNKLEVLGETLDG-QEEILH 1033 >gi|328863835|gb|EGG12934.1| hypothetical protein MELLADRAFT_87196 [Melampsora larici-populina 98AG31] Length = 347 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 25/259 (9%), Positives = 75/259 (28%), Gaps = 63/259 (24%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE------------ 50 Y F R+ + + + + + N + + + + + Sbjct: 76 LYQNFLRQFGVE-RKQKFQGGEFFKQLTNLRMTCNHPLLFRQNEQGVDAENQPINLIEQK 134 Query: 51 ---------VHDEK-----------------IKALEVIIEKANAAPIIVAYHFNSDLARL 84 +H+ K + + + ++ + S + + Sbjct: 135 LGIKLPDERIHNSKVRDAIPTDWKLSPKIAYLVHMLQKKKSHGGGKSVIYTQWKSFIDWI 194 Query: 85 QKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 AF + + + + G GLN+ + + Sbjct: 195 IMAFDNSGITYRQLHGDQSTFERTSQLNSFTKDPNVEAFVVSIEAGGVGLNMT-CADEVY 253 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 W+ + QQ ++R+ + G ++V V++++ +I++ + + K+ + Sbjct: 254 LMDAHWNPQVVQQAVDRL-----HRIGQAKSVRVFHVVTGQSIEQHLYNVQKRKAALAKR 308 Query: 194 LL-------NALKKETIHV 205 ++ K E + V Sbjct: 309 VITLTVPTEELEKAEALRV 327 >gi|323508354|emb|CBQ68225.1| related to RAD5-DNA helicase [Sporisorium reilianum] Length = 1377 Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 58/186 (31%), Gaps = 27/186 (14%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQ 90 +Y + L + ++ F S L R + Sbjct: 1190 IYVRNNVRSSTKVTALLDHLNALRAAEGPFKGVIFSQFTSFLDLIEPVLTRYRFRFLRLD 1249 Query: 91 GRTLDK-DPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G T K + E+ + L + G GLNL N + WW+ Sbjct: 1250 GSTPQKVREKLLVEFQSASSATETLLFLISLKAGGVGLNLTA-ANKIWLLDFWWN----- 1303 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL-------NAL 198 IE + R + G R V V+ + +++I+ +L + K + L + Sbjct: 1304 SSIENQAIDRIHRLGQTRPVSVFRYLVKDSIENRILLIQKRKDMLIRHALKQNGDEADRG 1363 Query: 199 KKETIH 204 K ET+ Sbjct: 1364 KSETLQ 1369 >gi|237717088|ref|ZP_04547569.1| helicase [Bacteroides sp. D1] gi|294647817|ref|ZP_06725369.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|229443071|gb|EEO48862.1| helicase [Bacteroides sp. D1] gi|292636725|gb|EFF55191.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CC 2a] Length = 829 Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 28 KTVKCLQLA--NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD----- 80 + Q+ + Y ++K + E+ + + ++ +++ + Sbjct: 489 LLLMLSQMRMLCDSTYILDQKTRYDTKVEETLNILRNVFESGDEKVVIFSQWERMTRLIA 548 Query: 81 -----LARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVF 134 L + G + + E + + + GLNLQ +IL+ Sbjct: 549 KELDVLGVRYEYLHGGIPSEARKNLTDNFTELPESRVFL-STDAGSTGLNLQ-VASILIN 606 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 L W+ +Q I RI + G K+ + V L+A TI+E +L L K+++ + + Sbjct: 607 LDLPWNPAVLEQRIARI-----YRIGQKKNIQVINLVASQTIEERMLSTLNFKTSLFEGI 661 Query: 195 LN 196 L+ Sbjct: 662 LD 663 >gi|281422316|ref|ZP_06253315.1| helicase, Snf2 family [Prevotella copri DSM 18205] gi|281403637|gb|EFB34317.1| helicase, Snf2 family [Prevotella copri DSM 18205] Length = 805 Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 71/182 (39%), Gaps = 19/182 (10%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---- 84 + + + + D++ + DE + + II + ++V + + Sbjct: 501 LSQMRMVCDSSYILDQKTRYDTKVDECVNIISDIISE-EGEKVVVFSQWERMTRLIAKEL 559 Query: 85 ------QKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + G +K + + NE + + GLNLQ I+ L Sbjct: 560 EKKEIGFEYLHGGVPSEKRKNLVDNFMNEPSSRVFL-STDAGSTGLNLQSAATIINI-DL 617 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ +Q I RI + G + + V L+ ++I++ +L +LR K+++ + +L+ Sbjct: 618 PWNPAVLEQRIGRI-----YRLGQQNNIQVINLVTPDSIEQEMLGKLRFKTSMFEGVLDD 672 Query: 198 LK 199 + Sbjct: 673 GE 674 >gi|224139702|ref|XP_002323235.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222867865|gb|EEF04996.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 398 Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 7/94 (7%) Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I++++ G +L A + G G+NL + + WW+ +E + Sbjct: 283 RQAEIIKKFSSAGADTVLLASLKTSGTGINLTA-ASKVYLLEPWWNSA-----VEEQAIN 336 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 R Q G + V + LIAQN+I+E +L+ K Sbjct: 337 RVHQYGQQENVRIVRLIAQNSIEERILEMQERKK 370 >gi|15230098|ref|NP_189077.1| chr40 (chromatin remodeling 40); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|11994696|dbj|BAB02934.1| unnamed protein product [Arabidopsis thaliana] Length = 1132 Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 8/116 (6%) Query: 88 FPQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I +N+ +L A +C G++L G + +V + W+ Sbjct: 978 MHGKVEQRDRQHMIDNFNKPDSGSKVLLASTKACSEGISL-VGASRVVILDVVWNPS--- 1033 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +E ++R + G KRAVF+Y+L+ ++T + + K I +L+ ++ ++ Sbjct: 1034 --VESQAISRAFRIGQKRAVFIYHLMVKDTSEWNKYCKQSEKHRISELVFSSTNEK 1087 >gi|46137913|ref|XP_390647.1| hypothetical protein FG10471.1 [Gibberella zeae PH-1] Length = 1033 Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 22/167 (13%) Query: 42 YDEEKHWKEVHDEKIKA-LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG--------- 91 E E H KI+A +E + + I+ + L + + + Sbjct: 865 DHEHYFNAEGHSTKIRALVEDVRKDLWTTKSIIFSCWTRTLHLIARHLEKAGIPYLQLDG 924 Query: 92 -RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 L + T+ ++ G + P+L + GLNL N + L W+ +E Sbjct: 925 NSPLPQRQQTLNKFENGTETPVLIMTTGTGAFGLNLTS-ANRIFIAELQWNPS-----VE 978 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDE----LVLQRLRTKSTIQD 192 ++R + G K+ V V I ++T++E + Q+ K I Sbjct: 979 SQAISRAIRLGQKKEVRVTRYITKDTVEEVNRQDIKQQQEYKKQIAA 1025 >gi|86355628|ref|YP_473296.1| Global transactivator [Hyphantria cunea nucleopolyhedrovirus] gi|86198233|dbj|BAE72397.1| Global transactivator [Hyphantria cunea nucleopolyhedrovirus] Length = 495 Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 26/226 (11%), Positives = 67/226 (29%), Gaps = 37/226 (16%) Query: 2 KQYHKFQRELYCDLQG------ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----- 50 + Y+ + E + + + Q+ + E Sbjct: 261 RVYNALKSESQRAYDDAVAGGDKLRSMQDVLWLLCRLRQMCCHPTLTKCAAMFTEQARIF 320 Query: 51 ---VHDEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTL---------- 94 K + +++ +++ + L + Sbjct: 321 EPSYESSKCRGALELVQRVLDTPNDKVVLVSQWVEFLQIVAGLLRHRGVPILLYTGQLRV 380 Query: 95 DKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ ++N + ++ G GLNL G + ++ W+ + IE Sbjct: 381 EERTAVENQFNAIDSPYRVMLMSIKCGGVGLNLVGGNH-IIMLEPHWNPQ-----IELQA 434 Query: 153 VTRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ +VY ++ +N+I+ + R K T + + + Sbjct: 435 QDRIHRMGQKKRTYVYKMLVDEENSIERYIKARQDKKLTFVNKVFD 480 >gi|295675065|ref|XP_002798078.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226280728|gb|EEH36294.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1074 Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 74/218 (33%), Gaps = 28/218 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y R+ + Q + + + + K Q Y K + + +E Sbjct: 858 YSAITRQGFEKFQAYQLSSRQNPKQAKKFGQ------YEGPHTKTKALISHLLDTIEESK 911 Query: 64 EKANA--APIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWNEG-KI 109 + IV + S L +Q +L + + + + + Sbjct: 912 KSPEKAPIKSIVFSSWTSHLDLIQIALEDNGITSFTRLDGTMSLKQRNAALDAFRDDDNV 971 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G GLNL G+ ++ Q ++R+ + G R V Sbjct: 972 TILLATLGAGGVGLNLTS-GSRAYIMEPQYNPAAIAQAVDRV-----HRLGQTREVTTIQ 1025 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN--ALKKETIHV 205 I +++I+E + + R K + D+ LN L + + + Sbjct: 1026 FIMKDSIEEKIAELARKKQQMADMSLNRGRLDRRELQL 1063 >gi|47216738|emb|CAG01012.1| unnamed protein product [Tetraodon nigroviridis] Length = 381 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 6/109 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ + N+ + + + G GL + +VF L+W+ + Sbjct: 41 PSSERIQLVHKFQNDPETRVAVLSIQAAGQGLTFTA-ASHVVFAELYWNPGHI-----KQ 94 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G ++ V+YLIA+ T D ++ L K T+ LN K+ Sbjct: 95 AEDRAHRIGQTSSINVHYLIAKGTFDTVMWSMLNRKETVTGTTLNGKKE 143 >gi|323356807|ref|YP_004223203.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] gi|323273178|dbj|BAJ73323.1| superfamily II DNA/RNA helicase, SNF2 family [Microbacterium testaceum StLB037] Length = 719 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 7/107 (6%) Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +T I +N + + + + G GLN+Q N+++ W E+ Sbjct: 592 QTSTARQAAIDAFNSDPDVGIAVCSLTAAGVGLNMQAASNVVLAELSWTAAEQT------ 645 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V + +IA +TID + + + +K + L+ Sbjct: 646 QAIDRVHRIGQEEPVTAWRIIAAHTIDTKIAELIDSKEGLAARALDG 692 >gi|125583090|gb|EAZ24021.1| hypothetical protein OsJ_07744 [Oryza sativa Japonica Group] Length = 1360 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 8/102 (7%) Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N+ K ++ A +C G+ L G + +V + W+ + R + Sbjct: 1224 REALMEAFNDMKSNAKVMLASTKACCEGITL-IGASRVVLLDVVWNPS-----VGRQAIG 1277 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G ++ V+ Y LI + T ++ R K + LL + Sbjct: 1278 RAYRIGQEKIVYTYNLITEGTKEKDKYDRQAKKDHMSKLLFS 1319 >gi|220931728|ref|YP_002508636.1| helicase domain protein [Halothermothrix orenii H 168] gi|219993038|gb|ACL69641.1| helicase domain protein [Halothermothrix orenii H 168] Length = 467 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 75/223 (33%), Gaps = 33/223 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD-------- 53 + Y+K + + ++ + + +L + + Sbjct: 204 ELYNKVTSYVKDEYNRRRVKKISILNLLTYQRELCSSSFALQRTLARSRDKSPYLRELYG 263 Query: 54 --------EKIKALEVIIEKANAAPIIVA---------YHFNSDLARLQKAFPQGRTLDK 96 KIK +E I++ + II H+ F + Sbjct: 264 LARNIRTNAKIKEVEKILKGIDGQAIIFTEYRATQEFIAHYLEKRGYKTILFNGALSSSG 323 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + + GLNLQ+ N+++ + L W+ + +Q I R+ Sbjct: 324 KEWIKYIFQQK--KDVLISTEAGSQGLNLQF-CNVIINYDLPWNPMKIEQRIGRV----- 375 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V +Y L ++TI+E +L L K + ++ ++ Sbjct: 376 HRLGQTKDVLIYNLATKDTIEEKILNLLYNKINLFKEIIGNME 418 >gi|240274844|gb|EER38359.1| DNA repair helicase RAD5,16 [Ajellomyces capsulatus H143] Length = 1112 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 7/107 (6%) Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + +I+E+ + I +L + G GL+L N V LWW+ + IE+ Sbjct: 832 MPIRQREKSIEEFSKDPAIRILVCSLRTAGTGLDLTA-ANKCVLVDLWWN-----EAIEQ 885 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + KR V ++ +N+ID+ + KS D +L + Sbjct: 886 QAFFRLFRINQKRKVEFVRVVVRNSIDDRLQLIQEDKSNNIDRVLGS 932 >gi|242777640|ref|XP_002479075.1| DNA excision repair protein (Rad5), putative [Talaromyces stipitatus ATCC 10500] gi|218722694|gb|EED22112.1| DNA excision repair protein (Rad5), putative [Talaromyces stipitatus ATCC 10500] Length = 1183 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 51/171 (29%), Gaps = 44/171 (25%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKI-- 109 +++ + +V F S L + + ++++N +I Sbjct: 993 LLKLPPNSKSVVFSQFTSFLDLIGPQLTKAGLTHLRLDGSMPQKARAEVLRQFNRTEIYE 1052 Query: 110 --------------------------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 +L + G GLNL N + WW Sbjct: 1053 ELESDEDAPKDGGASATHSKPPQPSPSILLISLRAGGVGLNLTA-ANNVFMMDPWWSFA- 1110 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +E + R + G R V V + +++I+ +L+ K I L Sbjct: 1111 ----VEAQAIDRVHRMGQLREVSVTRFVVKDSIEVRMLRVQERKMNIAGSL 1157 >gi|118576973|ref|YP_876716.1| superfamily II DNA/RNA helicase, SNF2 family [Cenarchaeum symbiosum A] gi|118195494|gb|ABK78412.1| superfamily II DNA/RNA helicase, SNF2 family [Cenarchaeum symbiosum A] Length = 574 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 6/107 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G++ I + EG+ L+ A + G+NL ++F L W I R Sbjct: 444 GQSDRSRQDQIDSFQEGRSKLMIAGLRAGNVGINL-SRARYVIFAELDWSPA-----IHR 497 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K VF YYLI T+DE V L KS D +++ Sbjct: 498 QAEDRLHRIGQKNTVFAYYLIGNGTLDEHVANILVDKSYEIDSIMDE 544 >gi|222637530|gb|EEE67662.1| hypothetical protein OsJ_25277 [Oryza sativa Japonica Group] Length = 716 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCT 100 KI A+ + ++ H S L + + Q + Sbjct: 521 AKIPAVLDYLGTIIEAECKFLIFAHHQSMLEAIHQHLLKKKVKCIRIDGQTPVPVRQTLV 580 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N+ I + G GL L + ++F L W + R + G Sbjct: 581 TDFQNKDDIKAAVLSIKAGGVGLTLTA-ASTVIFAELSWTPGDLI-----QAEDRAHRIG 634 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +V +YYL+A +T+D+++ ++ K +L+ +K Sbjct: 635 QVSSVNIYYLLANDTVDDIIWDVVQGKLENLGQMLDGQEK 674 >gi|24581780|ref|NP_608883.1| Marcal1 [Drosophila melanogaster] gi|75027220|sp|Q9VMX6|SMAL1_DROME RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 gi|22945611|gb|AAF52182.2| Marcal1 [Drosophila melanogaster] gi|39752623|gb|AAR30193.1| RE44811p [Drosophila melanogaster] gi|220948472|gb|ACL86779.1| Marcal1-PA [synthetic construct] Length = 755 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 8/187 (4%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 +E E A A++ + A + + + II + Sbjct: 487 KETLDAFNKELKTAKGRATEEILLRFYAR-TAEVKTRAVCAYLKTLVKEQKKFIIFAHHR 545 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQY 127 + F S L D ++ + + + +C G+ L Sbjct: 546 VMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCKVALLSLKACNSGITLTA 605 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 I+VF L W+ +R + G + V YLIA NT D+++ L+ K Sbjct: 606 -AEIIVFAELDWNPSTL-----AQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNK 659 Query: 188 STIQDLL 194 + + Sbjct: 660 QEVLSKV 666 >gi|70732012|ref|YP_261757.1| SNF2 family helicase [Pseudomonas fluorescens Pf-5] gi|68346311|gb|AAY93917.1| helicase, SNF2 family [Pseudomonas fluorescens Pf-5] Length = 650 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 18/154 (11%) Query: 55 KIKALEVIIEK-ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQE 103 KI+ ++ + +I+ F + + K I Sbjct: 484 KIRIAMDLLSELDPDDKVILFCEFKPTVAALKALCEEAGIGHVTLVGSDSPAKRQKAIDR 543 Query: 104 WN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + + ++ G G NL N + F L W + R + G Sbjct: 544 FQQDPDCRVFICTTSAAGTGNNLTA-ANYVFFLGLPWTPGQQD-----QAEDRAYRNGQL 597 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V V + + +ID+ + + L K + L+ Sbjct: 598 RMVIVKIPLIEASIDQQLWELLLAKRQVSLELIE 631 >gi|169830699|ref|YP_001716681.1| helicase domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637543|gb|ACA59049.1| helicase domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 1147 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 68/193 (35%), Gaps = 23/193 (11%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 A + + +LA A + ++ K + A +++ F Sbjct: 451 NAEQVREEIAELRRLAEQAKTVESSDSEAKLSKLKDLLHKEGFFDQPAKRLLLFTEFKDT 510 Query: 81 LA----------RLQKAFPQGRTLDKDPC------TIQEWNEGKIPLLFAHPASCGHGLN 124 L G Q++ EG+I +L A A+ G+N Sbjct: 511 LTYLVGNLKTWGLKVGYIHGGMKPGSRDEPGTRLYAEQQFREGEIQVLVATEAAG-EGIN 569 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ NIL + + W+ +Q + RI + G ++ ++ +A NTI+ VLQRL Sbjct: 570 LQ-VCNILFNYDIPWNPNRLEQRMGRI-----HRYGQRKDCLIFNFVATNTIEGRVLQRL 623 Query: 185 RTKSTIQDLLLNA 197 K L+ Sbjct: 624 LEKLQEIRDALDD 636 >gi|329764968|ref|ZP_08256555.1| SNF2-related protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138505|gb|EGG42754.1| SNF2-related protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 574 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 6/142 (4%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I +E + +I + G++ I ++ +G+ L+ A Sbjct: 414 IMEIEESVVVFCHHKVIHKLLHEKLGEFSPVSIIGGQSDKMRQEAIDKFQKGESKLMIAG 473 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL ++F L W I R R + G K VF YYLI T Sbjct: 474 LRAGNVGINLTR-AKYVIFAELDWSPA-----IHRQAEDRLHRIGQKNTVFAYYLIGNGT 527 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 +D+ V L KS D +++ Sbjct: 528 LDDHVANILVDKSYEIDSIMDE 549 >gi|90961729|ref|YP_535645.1| Phage helicase [Lactobacillus phage Sal1] gi|90820923|gb|ABD99562.1| Phage helicase [Lactobacillus phage Sal1] gi|300214512|gb|ADJ78928.1| Phage helicase [Lactobacillus salivarius CECT 5713] Length = 407 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 77/198 (38%), Gaps = 23/198 (11%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y KF ++ Y + + + + + + QL+ EK+ L +I Sbjct: 226 YRKFLKDKYLEFDNQELLGDTALTYLLGLRQLSG------------MYSKEKLDRLSDLI 273 Query: 64 EKANAAPIIVAYHFNSDLA----RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 + +I+ Y+F +L + ++ + + + + Sbjct: 274 DSTED-RLIIFYNFERELDEIVKIAKNKIRPISIVNGKTKNLTNYETKDNSITLIQYQAG 332 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GLNLQ N +V+F+ E ++Q +RI + G +R+ F Y LI + +++E Sbjct: 333 SMGLNLQK-ANKIVYFTPPQQSELYEQSKKRI-----HRIGQERSCFYYNLIVEKSVEER 386 Query: 180 VLQRLRTKSTIQDLLLNA 197 + + L+ + D L + Sbjct: 387 IYRALKERRDYTDELFKS 404 >gi|121582847|ref|YP_973289.1| SNF2-related protein [Polaromonas naphthalenivorans CJ2] gi|120596109|gb|ABM39547.1| SNF2-related protein [Polaromonas naphthalenivorans CJ2] Length = 1259 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 59/203 (29%), Gaps = 35/203 (17%) Query: 24 NSASKTVKCLQLANGA------VYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAY 75 N + ++ E K+ L + ++ I+ Sbjct: 886 NHLGLLHYLRLVCTDPRRHGLSIFKPEPISQYRASAPKLDWLLNQLGLIQSQGEKAIIFC 945 Query: 76 HFNSDLARLQKA----------------FPQGRTLDKDPCTIQEWNE-GKIPLLFAHPAS 118 F + LQ I+ + ++ P + Sbjct: 946 EFRNIQRLLQHYIEEVFALQADIINGDTSASASHSASRQKRIKAFQAKPGFGVIILSPVA 1005 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN---- 174 G G+N+Q N +V ++ W+ + E R + G R V+VY + Sbjct: 1006 VGFGVNIQA-ANHVVHYTRTWNPAK-----EDQASDRAWRIGQTRDVYVYCPVVAAQDFT 1059 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 T D + Q L K ++ +LN Sbjct: 1060 TFDVKLDQLLERKRSLAGDMLNG 1082 >gi|320034532|gb|EFW16476.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 2050 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 63/167 (37%), Gaps = 22/167 (13%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYH------FNSDL----ARLQKAFPQGRTLDKDPC 99 H + L+ II++ +++ H + D+ + Sbjct: 1366 HSHRAAMLDQIIKQSINAGDKVLIFSHSIPTLNYIEDVLKVNRWRYCRLDGTTPITNRQS 1425 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + + + G GLN+ G N +V F ++ E V R Sbjct: 1426 ATKSFNKIDSPMQVYLISTKAGGLGLNI-PGANRVVIFDFAFNPT-----WEEQAVGRAY 1479 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G ++ VFVY IA T ++++ + K+ + +++ KK I Sbjct: 1480 RFGQRKPVFVYRFIAGGTYEDIMYNKTVFKTQLSFRVVD--KKNPIR 1524 >gi|303318787|ref|XP_003069393.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240109079|gb|EER27248.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 2054 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 63/167 (37%), Gaps = 22/167 (13%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYH------FNSDL----ARLQKAFPQGRTLDKDPC 99 H + L+ II++ +++ H + D+ + Sbjct: 1370 HSHRAAMLDQIIKQSINAGDKVLIFSHSIPTLNYIEDVLKVNRWRYCRLDGTTPITNRQS 1429 Query: 100 TIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +N + + + + G GLN+ G N +V F ++ E V R Sbjct: 1430 ATKSFNKIDSPMQVYLISTKAGGLGLNI-PGANRVVIFDFAFNPT-----WEEQAVGRAY 1483 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G ++ VFVY IA T ++++ + K+ + +++ KK I Sbjct: 1484 RFGQRKPVFVYRFIAGGTYEDIMYNKTVFKTQLSFRVVD--KKNPIR 1528 >gi|256378168|ref|YP_003101828.1| SNF2-related protein [Actinosynnema mirum DSM 43827] gi|255922471|gb|ACU37982.1| SNF2-related protein [Actinosynnema mirum DSM 43827] Length = 885 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 58/155 (37%), Gaps = 17/155 (10%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPC 99 V K++ L+ I+ + N +IV ++ + L + + Sbjct: 697 GVKSVKLQRLKEIVAEAEENERKVIVFSNYRAVLDLVANALPGEVFGPLTGAVPPARRQQ 756 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ +L A + G GLN+Q +++V E + R + Sbjct: 757 VVDGFSSAEHGAVLVAQIVAGGVGLNIQA-ASVVVICEPQLKPTT-----EAQAIARAHR 810 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 G R V V+ L+++ +D + + L K+ + D Sbjct: 811 MGQVRTVQVHRLLSEEGVDRRITELLARKAKLFDE 845 >gi|218191274|gb|EEC73701.1| hypothetical protein OsI_08293 [Oryza sativa Indica Group] Length = 1363 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 8/102 (7%) Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N K ++ A +C G+ L G + +V + W+ + R + Sbjct: 1227 REALMEAFNNMKSNAKVMLASTKACCEGITL-IGASRVVLLDVVWNPS-----VGRQAIG 1280 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G ++ V+ Y LI + T ++ R K + LL + Sbjct: 1281 RAYRIGQEKIVYTYNLITEGTKEKDKYDRQAKKDHMSKLLFS 1322 >gi|240278273|gb|EER41780.1| transcription termination factor 2 [Ajellomyces capsulatus H143] Length = 536 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 71/216 (32%), Gaps = 26/216 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y R Y Q + + K Q Y K + + +E Sbjct: 320 YTAITRRGYEKFQESQLSRREGPKQAKKFGQ------YEGPHTKTKALISHLLDTIEESK 373 Query: 64 --EKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWN-EGKI 109 IV + S L ++ A TL + I + + + Sbjct: 374 EAPDEAPIKSIVFSSWTSHLDLIEIAMEDNGITTFTRLDGTMTLKQRNAAIDAFREDDNV 433 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G GLNL G+ + ++ Q ++R+ + G R V Sbjct: 434 TILLATLGAGGVGLNLTA-GSRVYIMEPQYNPAAIAQAVDRV-----HRLGQTREVTTIQ 487 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I +++I+E + + R K + D+ LN + + + Sbjct: 488 FIMKDSIEEKIAELARKKQQMADMSLNRGRLDRREL 523 >gi|296809167|ref|XP_002844922.1| chromatin-remodeling complex ATPase chain isw-1 [Arthroderma otae CBS 113480] gi|238844405|gb|EEQ34067.1| chromatin-remodeling complex ATPase chain isw-1 [Arthroderma otae CBS 113480] Length = 1771 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 54/157 (34%), Gaps = 18/157 (11%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPC 99 H +I+ + I+++ +++ + L + + Sbjct: 1308 HSRRIQMVGQIVDESIKAGDKVLIFSGYLYTLTYIGTMLAAKGQKFCRLDGKTPIATRQA 1367 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ + + GLN+ G N ++ F ++ E + R + Sbjct: 1368 ATKSFSNSDSQVYLISTKAGALGLNI-IGANRVIIFESEYNPT-----WEEQAIGRAYRL 1421 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G + VFVY + T +EL+ ++ K + ++ Sbjct: 1422 GQTKDVFVYRFVMGGTFEELIHEKGVFKKNMALRAVD 1458 >gi|324526853|gb|ADY48722.1| Transcription activator BRG1 [Ascaris suum] Length = 245 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 6/94 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + + G GLNLQ + ++ F W+ + R + G R V Sbjct: 20 DSEYFIFILSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDM-----QAQDRAHRIGQSREV 73 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V L+ N+I+E +L R K + + ++ A K Sbjct: 74 RVLRLVTVNSIEEKILAAARYKLNVDEKVIQAGK 107 >gi|120536993|ref|YP_957051.1| helicase domain-containing protein [Marinobacter aquaeolei VT8] gi|120326827|gb|ABM21136.1| helicase domain protein [Marinobacter aquaeolei VT8] Length = 906 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 6/111 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + ++ + + + G GL L ++F L W Sbjct: 735 PNEQRQAQADRFQSDEQCKVFVGTIQAAGVGLTLTA-AQTVLFAELDWVPGNM-----NQ 788 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G V VY+ + +ID +++RL K D L A E Sbjct: 789 AEDRAHRIGQLDHVLVYHTAVEGSIDTQMIRRLIEKQQTIDEALEAGDIEM 839 >gi|93005784|ref|YP_580221.1| SNF2-related [Psychrobacter cryohalolentis K5] gi|92393462|gb|ABE74737.1| SNF2-related [Psychrobacter cryohalolentis K5] Length = 1075 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 32/226 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + + + + + + + E+ + + + Sbjct: 855 LYKQVSNDYRSLSEQGHKGVM--LKALHDMRMICAHPLNFQEQATINDSPKAEWLINTLE 912 Query: 63 IEKANAAPIIVAYHFNSDLARLQK----------------AFPQGRTLDKDPCTIQEWNE 106 K +I+ F + L++ + R I ++ E Sbjct: 913 TIKQKNEKVIIFTEFRAIQVFLKRLLLERFGLNVTTVNGDSNTNSRVGLTRQGIIDKFQE 972 Query: 107 GK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 ++ + G G+N+Q N ++ ++ W+ + E R + G + V Sbjct: 973 TNGFNVIILSTVAVGFGVNIQK-ANHVIHYTRSWNPAK-----EDQATDRAYRIGQDKEV 1026 Query: 166 FVYYL-IAQN---TIDELVLQRLRTKSTIQDLLLN---ALKKETIH 204 +VYY IA + T + + + L +K ++ D +L L +E I Sbjct: 1027 YVYYPSIAADDFETFEIKLDKLLSSKRSLADDMLKPNVELTQELIQ 1072 >gi|212533265|ref|XP_002146789.1| DNA excision repair protein (Rad5), putative [Penicillium marneffei ATCC 18224] gi|210072153|gb|EEA26242.1| DNA excision repair protein (Rad5), putative [Penicillium marneffei ATCC 18224] Length = 1175 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 6/89 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +L + G GLNL N + WW +E + R + G R V Sbjct: 1067 QPSPNVLLISLRAGGVGLNLTA-ANNVFMMDPWWSFA-----VEAQAIDRVHRMGQLREV 1120 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V + +++I+ +L+ K I L Sbjct: 1121 SVTRFVVKDSIEVRMLRVQEKKMNIAGSL 1149 >gi|115463703|ref|NP_001055451.1| Os05g0392400 [Oryza sativa Japonica Group] gi|113579002|dbj|BAF17365.1| Os05g0392400 [Oryza sativa Japonica Group] Length = 450 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 23/175 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------- 87 + + E + V + +A +++ F L +++ Sbjct: 215 PMLERLRSNPYEGVKTRFVMEVVRLCEALKEKVLIFSQFIQPLELIKEHLRKIFKWREGK 274 Query: 88 ---FPQGRTLDK-DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+ L + +I+ +N +L A +C G++L G + +V + W+ Sbjct: 275 EILQMDGKILPRYRQNSIEVFNNPDSDARVLLASTRACCEGISLT-GASRVVLLDVVWNP 333 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R ++R + G K+ V+ Y LI T + R K + L+ + Sbjct: 334 A-----VGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 383 >gi|149184885|ref|ZP_01863202.1| hypothetical protein ED21_17567 [Erythrobacter sp. SD-21] gi|148830996|gb|EDL49430.1| hypothetical protein ED21_17567 [Erythrobacter sp. SD-21] Length = 1270 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 60/221 (27%), Gaps = 35/221 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--VHDEKIKAL 59 + Y + A + + E +++ Sbjct: 747 QAYDLVLARARALRESGEQGAM--LKVLHMLRGTSLHPSPPRGISNIDEYIGQSARLQKT 804 Query: 60 EVIIEKAN--AAPIIVAY------HFNSD-------LARLQKAFPQGRTLDKDPCTIQEW 104 I+E+ ++ F + L R K + + Sbjct: 805 FEILEEVKQRGEKALLFCEDLEMQTFLAMAIQERFALERRPMCISGKVAGHKRQEMVTAF 864 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +L P + G GL + N ++ S WW+ +E R + G Sbjct: 865 QSSPASFDVLILSPKAGGVGLTITA-ANNVIHLSRWWNPA-----VEDQATDRAYRIGQT 918 Query: 163 RAVFVYYLIA--------QNTIDELVLQRLRTKSTIQDLLL 195 R V ++ +A ++ D+ + + K ++ LL Sbjct: 919 RPVTIHIPMAVHPDEAIGPSSFDQRLDALMERKRSLSRGLL 959 >gi|297835518|ref|XP_002885641.1| hypothetical protein ARALYDRAFT_342596 [Arabidopsis lyrata subsp. lyrata] gi|297331481|gb|EFH61900.1| hypothetical protein ARALYDRAFT_342596 [Arabidopsis lyrata subsp. lyrata] Length = 1122 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 8/117 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I +N+ +L A +C G++L G + +V + W+ Sbjct: 967 FMHGKVEQRDRQHLIDNFNKPDSGSKVLLASTKACSEGISL-VGASRVVILDVVWNPS-- 1023 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +E ++R + G KRAVF+Y+L+ ++T + + K I +L+ ++ ++ Sbjct: 1024 ---VESQAISRAFRLGQKRAVFIYHLMVKDTSEWNKYCKQSEKHRISELVFSSTNEK 1077 >gi|242060152|ref|XP_002451365.1| hypothetical protein SORBIDRAFT_04g000808 [Sorghum bicolor] gi|241931196|gb|EES04341.1| hypothetical protein SORBIDRAFT_04g000808 [Sorghum bicolor] Length = 160 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 6/96 (6%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + PL G G+NL + ++ + + + V R + G Sbjct: 31 NFQRKDGPPLFLLTTKVGGVGINLTA-ASRVIIIDPSDNPCD-----DNQAVDRTYRIGQ 84 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R V VY L+ TI+E ++ K + +L Sbjct: 85 VRDVIVYRLVTCGTIEEHTYRQQTLKVETSNDVLEG 120 >gi|54287520|gb|AAV31264.1| unknown protein [Oryza sativa Japonica Group] gi|260401074|gb|ACX37088.1| helicase superfamily C-terminal domain containing protein [Oryza sativa Japonica Group] Length = 446 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 23/175 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------- 87 + + E + V + +A +++ F L +++ Sbjct: 211 PMLERLRSNPYEGVKTRFVMEVVRLCEALKEKVLIFSQFIQPLELIKEHLRKIFKWREGK 270 Query: 88 ---FPQGRTLDK-DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G+ L + +I+ +N +L A +C G++L G + +V + W+ Sbjct: 271 EILQMDGKILPRYRQNSIEVFNNPDSDARVLLASTRACCEGISLT-GASRVVLLDVVWNP 329 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R ++R + G K+ V+ Y LI T + R K + L+ + Sbjct: 330 A-----VGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFS 379 >gi|325972430|ref|YP_004248621.1| SNF2-related protein [Spirochaeta sp. Buddy] gi|324027668|gb|ADY14427.1| SNF2-related protein [Spirochaeta sp. Buddy] Length = 663 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 16/157 (10%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDKDPCT 100 K++ + +I +IV F + L+ G+T + Sbjct: 487 STKLRTVLNLISDLVKQGNKVIVWTIFVQTMQDLRNLIQKELGLSVELLNGQTKNFRAEI 546 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+E+ +P++ A+P++ ++L + ++ + ++ + Q +RI Sbjct: 547 IEEFKHSDALPVVIANPSAVSESISLHTCCHHAIYLDMSYNAVHYIQSKDRIHRLG---L 603 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + F YY+ A NTIDE V R+ K + + Sbjct: 604 SPEIKTFYYYIQANNTIDERVYSRVIMKEVRMNQAIE 640 >gi|260174557|ref|ZP_05760969.1| helicase domain protein [Bacteroides sp. D2] Length = 1046 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 25/213 (11%) Query: 8 QRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKH--------WKEVHDEKIKA 58 + Y D GE + + + Q+A+ Y ++ ++ D K++ Sbjct: 439 EDNSYTDYDGEEVLTQGGALGLVQRKRQVASSVWGYLNKETDLDRGIDAFESCPDAKVEE 498 Query: 59 LEVII---EKANAAPIIVAYHFNSDLARL--------QKAFPQGRTLDKDPCTIQEWNEG 107 L+ II K+ ++V F L L A ++ + ++ + Sbjct: 499 LQRIIEAVFKSGTKKLVVFALFRRTLKYLHIRLKKAGYNALIIHGQVENRAEILTQFKKD 558 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 K + GL++Q+ N +V + L W+ +Q I RI Q+ + V + Sbjct: 559 KNTHILLSSEVGSEGLDMQF-CNSMVNYDLPWNPMVVEQRIGRIDRFGQK----AKVVNI 613 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Y L+ +I E + RL + I + ++ Sbjct: 614 YNLVVAGSIQEEIYMRLLERIGIFRGTIGDMEA 646 >gi|124359580|gb|ABN05984.1| HMG-I and HMG-Y, DNA-binding; Bromodomain; Helicase, C-terminal [Medicago truncatula] Length = 1069 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 71/229 (31%), Gaps = 60/229 (26%) Query: 30 VKCLQLANGAVYYDEE-----KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 ++ + N + K + K+ L+ I+ K +++ L Sbjct: 137 MELRKTCNHPLLNYPFFSDLSKDFMVKCCGKLWMLDRILIKLQRTGHRVLLFSTMTKLLD 196 Query: 83 RLQKAFPQGRTLDKD----------PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGN 130 L++ R + + I ++N + + G GLNLQ + Sbjct: 197 ILEEYLQWRRLVYRRIDGTTALEDRESAIVDFNSPNSDCFIFLLSIRAAGRGLNLQS-AD 255 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ----------------- 173 +V + + + E V R + G KR V V Y+ A Sbjct: 256 TVVIYDPDPNPKN-----EEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDEMRIGG 310 Query: 174 ---------------NTIDELVL-QRLRTKSTIQDLLLNALK--KETIH 204 +I+ L+ + K + D ++NA + + T H Sbjct: 311 TIDMEDELAGKDRYIGSIESLIRSNIQQYKIDMADEVINAGRFDQRTTH 359 >gi|147676741|ref|YP_001210956.1| hypothetical protein PTH_0406 [Pelotomaculum thermopropionicum SI] gi|146272838|dbj|BAF58587.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 140 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 6/93 (6%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G P + + G GLNL ++ + LWW+ +E R + G R V Sbjct: 35 GAAPFMVVSLKAGGTGLNLTA-ATHVIHYDLWWNPA-----VEDQATDRTYRIGQTRTVM 88 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V+ LI+ T +E + + +K + L + A + Sbjct: 89 VHRLISLGTFEEKINTMMASKRELAGLTVAAGE 121 >gi|330900255|gb|EGH31674.1| SNF2-related:helicase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 244 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 66/207 (31%), Gaps = 33/207 (15%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 + + + ++ QL + K++ L ++ + Sbjct: 49 LSQTERDEYNQIMRSDQHRFARLGALRQL---------------LERVKVRILADLMAEL 93 Query: 67 N-AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ-EWNEGKIPLLFA 114 + +I+ + +A L++ + + K I + + Sbjct: 94 DVDDKVILFCEYQESVATLREHCLKLGVGCVTLVGSDSPKKRQKAIDAFQQDPDCRVFIG 153 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 ++ G G NL N + F L W R + G R V V +A++ Sbjct: 154 TRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAED 207 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKE 201 TID+ + Q L K + L++ +E Sbjct: 208 TIDQQLWQMLMDKRALASDLIDPEAEE 234 >gi|329954230|ref|ZP_08295324.1| helicase protein [Bacteroides clarus YIT 12056] gi|328527936|gb|EGF54922.1| helicase protein [Bacteroides clarus YIT 12056] Length = 562 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 78/215 (36%), Gaps = 24/215 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 +Y K + +L L+ +K+++ G V KIKA Sbjct: 351 EYEKAESDLIQYLRVFKNADDEKIAKSMR------GEVMVRMGILKAISARGKIKAAAEF 404 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ-------EWNEGKIPLLF 113 I +IV + + L+K FPQ T+ + I+ N L+ Sbjct: 405 IHDVIDGGEKLIVFAYLKEVVMELKKMFPQAVTVTGEDNAIRKQMSVDAFQNNPDCTLII 464 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + S G GL L + + F W + + R + G K V YY + + Sbjct: 465 LNYKSGGTGLTLTA-SSRVAFIEFPWTFSDCE-----QAEDRAHRNGQKNNVNCYYFLGK 518 Query: 174 NTIDELVLQRLRTKSTIQDLLL---NALKKETIHV 205 NTIDE + ++ K I + + + +K+ I + Sbjct: 519 NTIDEYMYDVIQRKKGIANGVTGTDDVVKENVIDM 553 >gi|302819025|ref|XP_002991184.1| hypothetical protein SELMODRAFT_429540 [Selaginella moellendorffii] gi|300141012|gb|EFJ07728.1| hypothetical protein SELMODRAFT_429540 [Selaginella moellendorffii] Length = 1524 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 29/156 (18%) Query: 52 HDEKIKALEVIIEKAN------------AAPIIVAYHFNSDLARLQKAFPQGRTLDKD-- 97 KI A+ + +V + S L ++ + + Sbjct: 960 SSSKINAVMERLMNLPVTSPAAAGKKAVTEKALVFSQWTSLLDLVEPRLEKAGLEFRRLD 1019 Query: 98 --------PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + E+NE ++ ++ GLN+ + ++ +WW+ + Sbjct: 1020 GTMSVMERDAAVCEFNEKPEVSVMLMGLKVGSLGLNMVAACH-VLLLDVWWNPT-----V 1073 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 E + R + G R V V + TI++ +L Sbjct: 1074 EDQAIDRAHRIGQTRDVHVTRFTVKKTIEDRILALQ 1109 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 11/103 (10%), Positives = 21/103 (20%), Gaps = 6/103 (5%) Query: 4 YHKFQRELYCDLQGENI------EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y ++ Q N ++ Q E+K K +E Sbjct: 826 YDSLEQRSRDKFQSYQRRGTVQKNYANIMVLLLRLRQACCHRSLVPEDKESKIEDEESNI 885 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT 100 + + F S + + L Sbjct: 886 DAKENVSICTICEDAPEQPFLSCCGHVFCSQCISEKLLTSEEL 928 >gi|224009730|ref|XP_002293823.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970495|gb|EED88832.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 487 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 65/222 (29%), Gaps = 50/222 (22%) Query: 4 YHKFQRELYC--DLQGENIEAFNSASKTVKC---LQLANGAVYYDEEKHWKEVH------ 52 Y + + L + IE + S+T K + N + E Sbjct: 272 YAQMIEQGVLRDMLLNQGIEQARTLSQTNKQMNHRKNCNHPFMFGEPIDPASGAHMGSAH 331 Query: 53 -------DEKIKALEVIIEKANAAPI--IVAYHFNSDL----------ARLQKAFPQGRT 93 K L+ ++E+ ++ S L Sbjct: 332 PQLLIRASGKFALLDRMLERLFKDKHQVLIFSQMTSLLNVIEDYLLFRQWKYCRIDGSTK 391 Query: 94 LDKDPCTIQEWN--------------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 +D+ + +N + + + + G G+NL + + F W Sbjct: 392 IDERQRQMDVFNSEKTAGKGGTRNDGDDRHFVFLLSTRAGGLGINL-ATADTCIIFDSDW 450 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 + + + + R + G R V VY L+ N++D ++ Sbjct: 451 NPHQ-----DSQAMDRCHRIGQNRPVAVYRLLTVNSVDVEMM 487 >gi|315922824|ref|ZP_07919064.1| helicase [Bacteroides sp. D2] gi|313696699|gb|EFS33534.1| helicase [Bacteroides sp. D2] Length = 1022 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 25/213 (11%) Query: 8 QRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKH--------WKEVHDEKIKA 58 + Y D GE + + + Q+A+ Y ++ ++ D K++ Sbjct: 415 EDNSYTDYDGEEVLTQGGALGLVQRKRQVASSVWGYLNKETDLDRGIDAFESCPDAKVEE 474 Query: 59 LEVII---EKANAAPIIVAYHFNSDLARL--------QKAFPQGRTLDKDPCTIQEWNEG 107 L+ II K+ ++V F L L A ++ + ++ + Sbjct: 475 LQRIIEAVFKSGTKKLVVFALFRRTLKYLHIRLKKAGYNALIIHGQVENRAEILTQFKKD 534 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 K + GL++Q+ N +V + L W+ +Q I RI Q+ + V + Sbjct: 535 KNTHILLSSEVGSEGLDMQF-CNSMVNYDLPWNPMVVEQRIGRIDRFGQK----AKVVNI 589 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Y L+ +I E + RL + I + ++ Sbjct: 590 YNLVVAGSIQEEIYMRLLERIGIFRGTIGDMEA 622 >gi|258572168|ref|XP_002544846.1| predicted protein [Uncinocarpus reesii 1704] gi|237905116|gb|EEP79517.1| predicted protein [Uncinocarpus reesii 1704] Length = 1932 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 10/124 (8%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + +N + + + + G GLN+ G N ++ F ++ Sbjct: 1423 WTYCRLDGTTPISSRQVATKYFNRTDSPMQVYLISTKAGGLGLNI-PGANRVIIFDFAFN 1481 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 E V R + G + VFVY ++ T ++ + R K+ + +++ KK Sbjct: 1482 PT-----WEEQAVGRAYRFGQTKPVFVYRFVSGGTYEDAMYNRTVFKTQLSFRVID--KK 1534 Query: 201 ETIH 204 I Sbjct: 1535 NPIR 1538 >gi|115473589|ref|NP_001060393.1| Os07g0636200 [Oryza sativa Japonica Group] gi|50508331|dbj|BAD30182.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like [Oryza sativa Japonica Group] gi|113611929|dbj|BAF22307.1| Os07g0636200 [Oryza sativa Japonica Group] gi|215697224|dbj|BAG91218.1| unnamed protein product [Oryza sativa Japonica Group] Length = 747 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCT 100 KI A+ + ++ H S L + + Q + Sbjct: 552 AKIPAVLDYLGTIIEAECKFLIFAHHQSMLEAIHQHLLKKKVKCIRIDGQTPVPVRQTLV 611 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N+ I + G GL L + ++F L W + R + G Sbjct: 612 TDFQNKDDIKAAVLSIKAGGVGLTLTA-ASTVIFAELSWTPGDLI-----QAEDRAHRIG 665 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +V +YYL+A +T+D+++ ++ K +L+ +K Sbjct: 666 QVSSVNIYYLLANDTVDDIIWDVVQGKLENLGQMLDGQEK 705 >gi|315505011|ref|YP_004083898.1| snf2-related protein [Micromonospora sp. L5] gi|315411630|gb|ADU09747.1| SNF2-related protein [Micromonospora sp. L5] Length = 621 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 17/151 (11%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQE 103 K++ L ++++ N ++V +F L R++ + T + E Sbjct: 425 AKVERLREVVQEAADNQWKVVVFSYFLEVLDRVRASLHDSPTFLLTGAIAPAARQQVVDE 484 Query: 104 WNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ +L + G GLNL +++V E + R + G Sbjct: 485 FSALDGHAVLISQITVGGVGLNLPA-ASVVVLTEPQLTPAA-----EEQAIRRCYRMGQT 538 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R V V+ L+A+NT+D+ +L+ L K+ + Sbjct: 539 RGVRVHRLLARNTVDQRLLEMLGRKTALIRA 569 >gi|84498682|ref|ZP_00997435.1| ATP-dependent RNA helicase [Janibacter sp. HTCC2649] gi|84381019|gb|EAP96906.1| ATP-dependent RNA helicase [Janibacter sp. HTCC2649] Length = 721 Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 6/110 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + +I ++ + G GLNLQ N+++ W E+ Sbjct: 584 PKVRKANIEAFLTDPEISVVVCSLTAAGVGLNLQVASNVVLAELSWTSAEQT------QA 637 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + R + G V + +IA TID + + + K+ + L+ +E Sbjct: 638 IDRVHRIGQTEPVTAWRIIAAQTIDSRLAELIDDKAGLAARALDGSDEEV 687 >gi|226286603|gb|EEH42116.1| DNA repair protein RAD16 [Paracoccidioides brasiliensis Pb18] Length = 1092 Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 26/216 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y R+ + Q + + + + K Q Y K + + +E Sbjct: 876 YSAITRQGFEKFQAYQLSSRQNPKQAKKFGQ------YEGPHTKTKALISHLLDTIEESK 929 Query: 64 EKANA--APIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWNEG-KI 109 + IV + S L +Q +L + + + + + Sbjct: 930 KSPEKAPIKSIVFSSWTSHLDLIQIALEDNGITSFTRLDGTMSLKQRNAALDAFRDDDNV 989 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G GLNL G+ ++ Q ++R+ + G R V Sbjct: 990 TILLATLGAGGVGLNLTS-GSRAYIMEPQYNPAAIAQAVDRV-----HRLGQTREVTTIQ 1043 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I +++I+E + + R K + D+ LN + + + Sbjct: 1044 FIMKDSIEEKIAELARKKQQMADMSLNRGRLDRREL 1079 >gi|170780922|ref|YP_001709254.1| hypothetical protein CMS_0479 [Clavibacter michiganensis subsp. sepedonicus] gi|169155490|emb|CAQ00599.1| hypothetical protein CMS0479 [Clavibacter michiganensis subsp. sepedonicus] Length = 197 Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 12/154 (7%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHFNS-------DLARLQKAFPQGRTLDKDPCTIQE 103 K + + I+ + +V F L R A G T D+D + Sbjct: 11 SPKYQEVLAIVSENAARGRKTLVWSTFIRSINTLERVLGRFGPAVVHGGTPDRDEQIRRF 70 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 ++ +L ++PA+ G G++L + + V+ + Q ++RI R Sbjct: 71 KHDDDCMVLLSNPATLGEGISLHHECHDAVYVDRDFAAGRFLQSLDRIHRLGLPPGTSTR 130 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V L ++ T+DE+V RL K +L+ Sbjct: 131 -VTV--LASERTVDEVVAARLGAKLAFMGGILDD 161 >gi|47212607|emb|CAF93283.1| unnamed protein product [Tetraodon nigroviridis] Length = 905 Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 67/205 (32%), Gaps = 20/205 (9%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 MK K + + + S + K L L + K K Sbjct: 40 MKVLEKLLKYYL-----QRKDKVLLFSLSTKLLDLLESFCMAQGLDFSRLDGTTKAKDRV 94 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT---------IQEWNEGKIPL 111 I+++ N++ I ++ L ++ I + + Sbjct: 95 QIVKEFNSSTHINLCLVSTLLVEEKQFLTHFSVFHLLKILFALFKILCPIAFFCALYSNI 154 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 F + G GLN G N++V F W+ + + R + G R V V LI Sbjct: 155 FFYIIRAGGLGLNF-VGANVVVLFDPTWNPAS-----DLQAIDRAYRIGQIRNVTVLRLI 208 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLN 196 + T++E++ R K +Q +L Sbjct: 209 SLGTVEEVIYLRQVYKQQLQCSVLG 233 >gi|298705202|emb|CBJ28633.1| SNF2 helicase [Ectocarpus siliculosus] Length = 2420 Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 14/139 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------PCTIQEWNE-GKIPLL 112 I+ + +V ++ L ++ AF + ++ + G L Sbjct: 2114 DILALGPSDKCLVFSQWDDMLDIVELAFKENGVSYARMKGKNRSELALEAFRAEGGPRAL 2173 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + HGLNL N + + +E V R + G R ++ I Sbjct: 2174 MLPIKTGSHGLNL-VEANHVFLLEPLLNAA-----VEAQAVNRVHRGGQTRPTTIHRFIV 2227 Query: 173 QNTIDELVLQRLRTKSTIQ 191 + TI+E + + + K+++ Sbjct: 2228 RGTIEEDIERLRKKKTSLA 2246 >gi|302896484|ref|XP_003047122.1| hypothetical protein NECHADRAFT_122747 [Nectria haematococca mpVI 77-13-4] gi|256728050|gb|EEU41409.1| hypothetical protein NECHADRAFT_122747 [Nectria haematococca mpVI 77-13-4] Length = 834 Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 56/176 (31%), Gaps = 19/176 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----------RLQKAFPQG 91 ++ + + + +E + I+ + L Sbjct: 658 HEHYFNNTGISTKMRAIIEDVRVDLGTTKSIIFSCWTRTLHLLSKHLEEAKIPFHQIDGD 717 Query: 92 RTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + K + + + +L + GLNL N + L W+ +E Sbjct: 718 CPIPKRQAKLDAFDKNDDVQVLIMTTGTGAFGLNLT-CANRIFIAELQWNPS-----VEN 771 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTID--ELVLQRLRTKSTIQDLLLNALKKETIH 204 + R + G + V V I ++T++ + ++ + R K + L + ++ + Sbjct: 772 QAIARAIRLGQENEVRVTRYIIKDTVEVMQEMMAQQRHKKNLAALGFDDYDEDWMD 827 >gi|6735309|emb|CAB68136.1| helicase-like protein [Arabidopsis thaliana] Length = 1496 Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 65/198 (32%), Gaps = 30/198 (15%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANA 68 L ++ E + T + + K++ L++++++ A Sbjct: 1165 LIQEIDSELPVVQPALQLTHRIFGSC--PPMQSFDPAKLLTDSGKLQTLDILLKRLRAGN 1222 Query: 69 APIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +++ L L+ +D+ + I + Sbjct: 1223 HRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTR 1282 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+NL + ++F+ W+ + + R + G + T++ Sbjct: 1283 AGGLGINLTA-ADTVIFYESDWNPTL-----DLQAMDRAHRLGQTKD---------ETVE 1327 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L R K+T+Q L++ Sbjct: 1328 EKILHRASQKNTVQQLVM 1345 >gi|15615380|ref|NP_243683.1| Snf2/Rad54 family helicase [Bacillus halodurans C-125] gi|10175438|dbj|BAB06536.1| helicase (Snf2/Rad54 family) [Bacillus halodurans C-125] Length = 566 Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 64/155 (41%), Gaps = 17/155 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF---------PQGRTLDKDPCTIQE 103 K + +I++ N +I+ + + LQ +G +++ Sbjct: 356 HAKAEKALELIQQIND-KVIIFTEYRATQLYLQWYLKQHGISSVPFRGGFKRGKKDWMRQ 414 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 E + +L A + G G+NLQ+ + ++ + L W+ +Q I RI + G Sbjct: 415 LFENRAQVLIAT-EAGGEGINLQF-CHHIINYDLPWNPMRIEQRIGRI-----HRLGQTE 467 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 V +Y ++TI+E +L L K + + ++ L Sbjct: 468 DVRIYNFAVKDTIEEQILTLLYEKIQLFERVVGEL 502 >gi|326333794|ref|ZP_08200027.1| SNF2 domain protein [Nocardioidaceae bacterium Broad-1] gi|325948376|gb|EGD40483.1| SNF2 domain protein [Nocardioidaceae bacterium Broad-1] Length = 905 Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 17/166 (10%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA--------RLQKAF 88 + + + K++ L I+ + N +IV HF L + Sbjct: 696 FMAMRQAAMLQGTSSAKVERLIEIVGEAEENGRRVIVFSHFRKVLDDLVTLLPGEVFGPL 755 Query: 89 PQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ + E++ G +L + G GLN+Q +++V Sbjct: 756 TGSVPAEERQQMVDEFSAAGHGAVLVTQIVAGGVGLNIQA-ASVVVICEPQLKPT----- 809 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 IE + R R+ G ++V V+ L+++ +D+ V L K+ + D Sbjct: 810 IEWQAIARARRMGQLQSVQVHRLLSEVGVDQRVHDILAAKAELFDD 855 >gi|295695376|ref|YP_003588614.1| helicase domain protein [Bacillus tusciae DSM 2912] gi|295410978|gb|ADG05470.1| helicase domain protein [Bacillus tusciae DSM 2912] Length = 572 Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 38/226 (16%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAV-------YYDEEKHWKEVHDEKI 56 Y + + + + N ++ + +++ ++ Sbjct: 290 YEAVTAFIREEYRRRIDTSQNVLHLITLQREMCSSPYAALNTLERMAKDEAHPPGFRARL 349 Query: 57 KALEVI---------------IEKANAAPIIVAYHFN-------SDLARLQKAFPQGRTL 94 L + + +IV + + R R Sbjct: 350 LELCELGARIPTYTKVETTIDLVNQIHDKVIVFTEYRASQDFLLYMMKRRGIPAVPFRGG 409 Query: 95 DKD--PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +++ + ++ A + G GLNLQ+ N ++ F L W+ +Q I RI Sbjct: 410 FQRGKKDWMKDIFSKRAQVMVAT-EAGGEGLNLQF-CNQIINFDLPWNPMRVEQRIGRI- 466 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G R VF++ L +TI++ +++ L+ K + +L++ L Sbjct: 467 ----HRLGQTRDVFIHNLATADTIEQYIVELLQEKIRLFELVIGEL 508 >gi|294659540|ref|XP_002770598.1| DEHA2G08800p [Debaryomyces hansenii CBS767] gi|199434043|emb|CAR65933.1| DEHA2G08800p [Debaryomyces hansenii] Length = 1225 Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 62/172 (36%), Gaps = 23/172 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ-------------K 86 +Y + I L+++ E++ ++V F+S L ++ Sbjct: 1038 LYLYDPTKTSSKIQCLINHLKILKEQSPNEQVVVFSQFSSYLDIIENELKIQISNDFVVY 1097 Query: 87 AFPQGRTLDKDPCTIQEW----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F +++ ++ + +E K+ +L + G GLNL + WW Sbjct: 1098 KFDGRLNMNERQKILENFSSQKHENKVMILLLSLKAGGVGLNLTT-ASRAFMMDPWWSPS 1156 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +E + R + G V V I ++I+ +L+ K I + + Sbjct: 1157 -----VEDQAIDRLHRIGQNSNVKVTRFIMADSIETKMLKIQERKKQIGEAV 1203 >gi|118104167|ref|XP_425043.2| PREDICTED: similar to RP11-346B7.2 [Gallus gallus] Length = 1132 Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 26/185 (14%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + ++ + I + K QL N + K K+ + Sbjct: 493 QLSKDAAFE----TISDPKYSGKMRVLQQLLNHFRKNKD-KVLLFSFSTKLLDVLEQYCI 547 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLN 124 A+ + + ++E+N +I + + G GLN Sbjct: 548 ASG--------------LDFRRLDGSTKSEDRIRIVREFNRVPEINICLVSTMAGGLGLN 593 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 G N+++ F W+ + + R + G + V V+ LI+ T++E++ R Sbjct: 594 F-VGANVVILFDPTWNPAN-----DLQAIDRAYRIGQCKDVKVFRLISLGTVEEMMYLRQ 647 Query: 185 RTKST 189 K Sbjct: 648 VYKQR 652 >gi|308161598|gb|EFO64037.1| Transcription regulatory protein SNF2 [Giardia lamblia P15] Length = 2076 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 56/159 (35%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKANA--APIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCT 100 K++ L+ I+ K + +++ F F Sbjct: 1090 SGKLELLDNILAKLHKTSHRVLIFSQFKKVLDVLSSYLHYRRYNFVRFDGSVKDVDRNSM 1149 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N+ + + HGLNLQ + ++ F ++ ++ R + Sbjct: 1150 IRGYNKEDSKDFVFLLSTRAASHGLNLQT-ADTVIIFDCDYN-----GTYDQQAQDRCYR 1203 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G V V+ L + I+ +L +K ++ ++++A Sbjct: 1204 LGQVNPVKVFKLYSNTAIESKMLSVATSKLSLATIVMDA 1242 >gi|221058551|ref|XP_002259921.1| DNA helicase [Plasmodium knowlesi strain H] gi|193809994|emb|CAQ41188.1| DNA helicase, putative [Plasmodium knowlesi strain H] Length = 1445 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 17/177 (9%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHD---EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 K QL + + + V +K ++ ++ N I + + Sbjct: 1241 TKLKQLFDHIQDDMKNELHIVVFSQWIGFLKIIQKLLTLHNIPNKIYDGSLTYEERKTTL 1300 Query: 87 AFPQGRTLDKDPCTIQEWN--------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + I +L + G GLNL + + LW Sbjct: 1301 LWFNIQKGKVYQPGIGFTKPSSPIPVENVSGKVLLCSLKAGGVGLNLT-VSSKVYLMDLW 1359 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W+ IE R + G + V +Y + + T++E +LQ ++K + +L Sbjct: 1360 WNPA-----IEDQAFERVHRIGQLKDVSIYKFVLEKTVEERILQIHQSKQYTANQIL 1411 >gi|8489199|gb|AAF75617.1|AF216814_8 unknown [Lactococcus lactis subsp. lactis bv. diacetylactis] Length = 850 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 19/133 (14%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + TI + G+ +L +P + ++L + ++ ++L Q Sbjct: 716 YGGIGARQREETIVAFQNGEFDVLITNPHTLAESVSLHKIAHDAIYLEYSFNLTHMLQSR 775 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQ------NTIDELVLQRLRTKSTIQDLLLNA----- 197 +RI + YY + + TID + RL K I + + Sbjct: 776 DRIHRLG---LPENQETNYYYFMTEGQEGKRGTIDRKIYSRLLAKKDIMYEAIESELIKP 832 Query: 198 -----LKKETIHV 205 K E + + Sbjct: 833 EFTIDDKAEILQM 845 >gi|328778817|ref|XP_624010.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Apis mellifera] Length = 673 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 63/190 (33%), Gaps = 7/190 (3%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 K +E+ + + N+ K LQ N + ++ V I + II Sbjct: 407 KIGKEMLEISKKLEKKVLNNLEKHNTLLQYYNESSIAKQKAICDYVSKLFINKQKCIIFA 466 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLN 124 + + + ++ I ++ + + G+ Sbjct: 467 HHHNILNAICEVVESMNIKFIRIDGKTNPERRKYEIDKFQNNDSYIAAVLSITAANAGIT 526 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L +++F L+W+ R + G + V + YL+A++T D+ + + Sbjct: 527 LTA-AQLVIFAELFWNPGILC-----QAEDRVHRIGQYKNVIIQYLVAKHTADDYLWPLI 580 Query: 185 RTKSTIQDLL 194 + K + + + Sbjct: 581 QKKMNVLNEV 590 >gi|302775146|ref|XP_002970990.1| hypothetical protein SELMODRAFT_171818 [Selaginella moellendorffii] gi|300160972|gb|EFJ27588.1| hypothetical protein SELMODRAFT_171818 [Selaginella moellendorffii] Length = 692 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 7/113 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + N K+ + G GL L + ++F + W + Sbjct: 522 PVIRQSMVDKFQNNEKVRAAVLSIRAAGLGLTLTS-ASTVIFAEMTWTPGDLI-----QA 575 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R + G + +V +YYL A +TID+ + + + K +LN ++ET+ V Sbjct: 576 EDRAHRIGQRSSVNIYYLHAPDTIDDFIWETIHRKLGNLGQVLNG-REETMRV 627 >gi|168009588|ref|XP_001757487.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691181|gb|EDQ77544.1| predicted protein [Physcomitrella patens subsp. patens] Length = 952 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 25/161 (15%) Query: 55 KIKALEVI--IEKANAAPIIVAYHFNSDLARLQKAFPQ---------------GRTLDKD 97 K+K + + + A +++ + LA ++ Q + Sbjct: 755 KLKWVLDLVQLCDAAKEKVLIFSEYLYSLALIENMTMQRMNWSRGSQILRLDGSLPPQER 814 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++N + + +L A +CG G++L G + +V + W+ + R ++R Sbjct: 815 EMVQHKFNTDPEAKMLCASIKACGEGISL-VGASRVVLLEVHWNPS-----VPRQAISRA 868 Query: 157 RQAGFKRAVFVYYLIAQNTIDE-LVLQRLRTKSTIQDLLLN 196 + G +R V VY LIA +T + + K + LL + Sbjct: 869 FRIGQQRKVVVYRLIAADTYEATNMHAVATRKEWLSRLLFD 909 >gi|195342588|ref|XP_002037882.1| GM18506 [Drosophila sechellia] gi|194132732|gb|EDW54300.1| GM18506 [Drosophila sechellia] Length = 592 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 8/187 (4%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 +E E A AS+ + A + + + II + Sbjct: 324 KETLDAFNKELKTAKGRASEEILLRFYAR-TAEVKTRAVCAYLKTIVKEQKKFIIFAHHR 382 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQY 127 + F S L D ++ + + + +C G+ L Sbjct: 383 VMMDAISDFLSGLKVHYIRIDGQTRSDLRSDSVDTFQKKSSCKVALLSLKACNSGITLTA 442 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 I+VF L W+ +R + G + V YL+A NT D+++ L+ K Sbjct: 443 -AEIIVFAELDWNPSTL-----AQAESRAHRIGQTKPVICRYLMAHNTADDIIWNMLKNK 496 Query: 188 STIQDLL 194 + + Sbjct: 497 QEVLSKV 503 >gi|157113183|ref|XP_001651931.1| helicase [Aedes aegypti] gi|108877866|gb|EAT42091.1| helicase [Aedes aegypti] Length = 740 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 21/165 (12%) Query: 53 DEKIKALEVIIEK---ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPC 99 KI L ++++ ++ ++S L + R Sbjct: 568 SSKIARLLELLDEKILCGDDKAVIVSQWSSVLDIVAHHLSSKRVKYVSLTGKVAVKFRND 627 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + E+N+ ++ + G GLNL G N L+ L W+ + E R Sbjct: 628 IVTEFNKQGSGPKVMLLSLTAGGVGLNL-VGANHLLLLDLHWNPQL-----EAQAQDRVY 681 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G K+ VFV+ + T+++ + K I + +L K++ Sbjct: 682 RVGQKKTVFVWKFMCVETVEQAIRGLQEKKIGIANEVLTGTKQKG 726 Score = 38.2 bits (87), Expect = 0.75, Method: Composition-based stats. Identities = 4/45 (8%), Positives = 13/45 (28%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 E ++ F ++ Q+ + + + + E Sbjct: 456 NEEVKQFQILVLLLRLRQICCHPGLIHQMLEDDDGNFDMSTVEEE 500 >gi|3702343|gb|AAC62900.1| putative SNF2 subfamily transcriptional activator [Arabidopsis thaliana] Length = 1245 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 71/229 (31%), Gaps = 60/229 (26%) Query: 30 VKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 ++ + N + + K+ L+ I+ K +++ L Sbjct: 331 MELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLD 390 Query: 83 RLQKAFPQGRTLDKD----------PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGN 130 L++ R + + I ++N+ + + G GLNLQ + Sbjct: 391 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQT-AD 449 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQ--------------- 173 +V + + + E V R + G R V V Y+ + + Sbjct: 450 TVVIYDPDPNPKN-----EEQAVARAHRIGQTREVKVIYMEAVVEKLSSHQKEDELRSGG 504 Query: 174 ---------------NTIDELVL-QRLRTKSTIQDLLLNALK--KETIH 204 +I+ L+ + K + D ++NA + + T H Sbjct: 505 SVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTH 553 >gi|256389644|ref|YP_003111208.1| SNF2-related protein [Catenulispora acidiphila DSM 44928] gi|256355870|gb|ACU69367.1| SNF2-related protein [Catenulispora acidiphila DSM 44928] Length = 727 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 59/152 (38%), Gaps = 17/152 (11%) Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLA--------RLQKAFPQGRTLDKDPCTIQ 102 K++ L I+++A N+ ++V +F L R + Sbjct: 541 SAKLRRLVEIVDEAEANSRKVVVFSYFRDVLDTVCRALGDRASGPLTGSMQPQHRQELVD 600 Query: 103 EWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + K +L + + G GLN+Q ++++ E + R + G Sbjct: 601 AFTAAKKHAVLVSQIQAGGVGLNMQA-ASVVILCEPQVKPTL-----ETQAIARAHRMGQ 654 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R V V+ L+ +++D+ +L+ L KS + D Sbjct: 655 IRRVQVHRLLVADSVDQRMLEILDAKSGLFDA 686 >gi|189199576|ref|XP_001936125.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983224|gb|EDU48712.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 553 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 52/152 (34%), Gaps = 16/152 (10%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCT 100 + + + +++ + + + I+ + + L + K Sbjct: 371 LDNVRNQSIRDKWQVSFSTNCIIFSFWKTTLDITASLFDKYSISCFRIHGTLSASKRSRI 430 Query: 101 IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ E +L + G N NI+ W+ +E + R + Sbjct: 431 LTDFEESSTTRVLLITLGTGAVGSNKLKAANIIHIVEPQWNPS-----VENQAIGRVIRL 485 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 G +RAV + I ++TI+E V R K + Sbjct: 486 GQERAVTIIRYIMKDTIEEAVQSRQLRKLQLA 517 >gi|224126629|ref|XP_002329602.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222870311|gb|EEF07442.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 148 Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 7/113 (6%) Query: 94 LDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + T++E+NE + +L + G GLNL + + WW+ +Q I RI Sbjct: 35 QKQRERTLKEFNETREKMVLLMSLKAGGVGLNLTA-ASNVFLMDPWWNPAVEEQAIMRI- 92 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G KR VFV I ++T++E + Q K + L + + + Sbjct: 93 ----HRIGQKRTVFVRRFIVESTVEERLQQVQAKKQRMIAGALTDEEVRSARI 141 >gi|14334972|gb|AAK59663.1| putative chromatin remodelling complex ATPase chain ISWI [Arabidopsis thaliana] Length = 538 Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 47/123 (38%), Gaps = 8/123 (6%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFS 136 D+ +I+ +N+ + + G G+NL ++++ + Sbjct: 1 MYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINL-ATADVVILYD 59 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W+ + ++ R + G K+ V V+ +N I+ V++R K + L++ Sbjct: 60 SDWNPQ-----VDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQ 114 Query: 197 ALK 199 + Sbjct: 115 QGR 117 >gi|218511830|sp|Q6BIP2|RAD5_DEBHA RecName: Full=DNA repair protein RAD5 Length = 1190 Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 62/172 (36%), Gaps = 23/172 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ-------------K 86 +Y + I L+++ E++ ++V F+S L ++ Sbjct: 1003 LYLYDPTKTSSKIQCLINHLKILKEQSPNEQVVVFSQFSSYLDIIENELKIQISNDFVVY 1062 Query: 87 AFPQGRTLDKDPCTIQEW----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 F +++ ++ + +E K+ +L + G GLNL + WW Sbjct: 1063 KFDGRLNMNERQKILENFSSQKHENKVMILLLSLKAGGVGLNLTT-ASRAFMMDPWWSPS 1121 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +E + R + G V V I ++I+ +L+ K I + + Sbjct: 1122 -----VEDQAIDRLHRIGQNSNVKVTRFIMADSIETKMLKIQERKKQIGEAV 1168 >gi|183222781|ref|YP_001840777.1| ATP-dependent RNA helicase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912812|ref|YP_001964367.1| DNA/RNA helicase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777488|gb|ABZ95789.1| DNA/RNA helicase Superfamily II [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781203|gb|ABZ99501.1| ATP-dependent RNA helicase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 948 Score = 67.5 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 79/203 (38%), Gaps = 29/203 (14%) Query: 8 QRELYCDLQGENIEAFN----SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + +L+ E + +F + + ++ ++ +K++ + Sbjct: 425 VEDFITELEDEEMSSFQRIKRELFTLNRL--------IHLGKQIKEDKKTQKLRETLYRL 476 Query: 64 EKANAAPIIVAYHFNSDLARLQK---------AFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 +K I+ F + LQ F ++D+ IQ++ E + Sbjct: 477 KKEGHKKFIIFTQFRTTQDHLQSVLEPDFKVSPFHGSLSMDEKEVAIQKFKEDY--EILI 534 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G NLQ+ NIL + L W + +Q I RI + G K V+++ +++ Sbjct: 535 CTEAGGEGRNLQF-ANILFNYDLPWSPLKIEQRIGRI-----HRFGQKDNVYIFNFASKD 588 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 T+ E +L+ L K + + + A Sbjct: 589 TVAERILEVLTNKIRLFEESIGA 611 >gi|255656168|ref|ZP_05401577.1| putative helicase [Clostridium difficile QCD-23m63] Length = 1013 Score = 67.5 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 59/184 (32%), Gaps = 24/184 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + +++ ++ +N++ S K QL ++ + KI+ Sbjct: 837 KIYSVYSKDIQDKIKDKNLKKDKIVIFSYLTKLRQLCLDPSIVVKDYN---KKSSKIETC 893 Query: 60 EVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 I+ I++ F S L + + E+N Sbjct: 894 LEILRDSINENHKILLFSQFTSVLKNISKELDKYKIKYHYIDGKTNAKERLELVDEFNNS 953 Query: 108 -KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G GLNL ++++ F WW+ +E R + G K+ Sbjct: 954 IDKKVFLISLKAGGTGLNLTS-ADMVIHFDPWWNPS-----VENQASDRAHRFGTKKFST 1007 Query: 167 VYYL 170 Y + Sbjct: 1008 SYKI 1011 >gi|302883508|ref|XP_003040654.1| hypothetical protein NECHADRAFT_79818 [Nectria haematococca mpVI 77-13-4] gi|256721542|gb|EEU34941.1| hypothetical protein NECHADRAFT_79818 [Nectria haematococca mpVI 77-13-4] Length = 895 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 48/159 (30%), Gaps = 38/159 (23%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGKIPLLFAHPAS 118 +V ++ L +Q AF Q + + N +L A S Sbjct: 716 KSVVFSYWTKMLDLVQIAFRQSGYSYERIDGQSSLRQRHRAMSKFNNNPACTVLLATIGS 775 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G++L N + W+ M E + R + G +R V I +I+E Sbjct: 776 AGEGIDLTA-ANHVHLMEPHWNP-----MAEEQAIARVHRIGQRRPVIATKYITPRSIEE 829 Query: 179 ---------------------LVLQRLRTKSTIQDLLLN 196 VL+ + K + L+ Sbjct: 830 VGYLSTLNNRDFDPANGSINQYVLEMQKEKLALSRKALD 868 >gi|294899102|ref|XP_002776495.1| DNA repair protein RAD5, putative [Perkinsus marinus ATCC 50983] gi|239883507|gb|EER08311.1| DNA repair protein RAD5, putative [Perkinsus marinus ATCC 50983] Length = 666 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 6/95 (6%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + G GLNL G L LWW+ +E + R + G + V +Y Sbjct: 545 KVLLVSLRAGGVGLNLTA-GRTLYLLDLWWNPA-----VEEQAMMRVHRLGQQHTVRIYR 598 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + +++ID+ ++ KS + ++ +A + Sbjct: 599 FVVRDSIDQRIMSLQAGKSRLTNMAFDASDAAALQ 633 >gi|301384370|ref|ZP_07232788.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tomato Max13] Length = 222 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 63/200 (31%), Gaps = 33/200 (16%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPII 72 + + ++ QL + K++ + ++ + + +I Sbjct: 34 EYNQIMRSDTHRFARLGALRQL---------------LERVKVRIVADLMAELDVDDKVI 78 Query: 73 VAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + + +A L++ + + + + ++ G Sbjct: 79 LFCEYQESVATLREHCLKMGIGCVTLVGSDSPKKRQKAIDAFQQDPDCRVFIGTRSAAGT 138 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G NL N + F L W R + G R V V +A++TID+ + Sbjct: 139 GYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAEDTIDQQLW 192 Query: 182 QRLRTKSTIQDLLLNALKKE 201 Q L K + L++ +E Sbjct: 193 QMLMDKRALASDLIDPEAEE 212 >gi|154303593|ref|XP_001552203.1| hypothetical protein BC1G_08681 [Botryotinia fuckeliana B05.10] gi|150854475|gb|EDN29667.1| hypothetical protein BC1G_08681 [Botryotinia fuckeliana B05.10] Length = 274 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 59/159 (37%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDP 98 K +AL I++ + +++ + S L +QK Q +D Sbjct: 100 SSKTEALMQIVKVTHNDPLSKVVIFSQWTSFLNIVQKQLEQAGIKFARIDGSMTAPQRDK 159 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + +L A A C GLNL + ++ WW IE V R + Sbjct: 160 GMNSLESDPECRILLASLAVCSVGLNLVA-ADTVILADSWWAPA-----IEDQAVDRVHR 213 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G KR V+ L+ + +I+E VL+ K + Sbjct: 214 LGQKRECKVWRLVMEGSIEERVLEIQGEKRKLVGRAFQE 252 >gi|218200089|gb|EEC82516.1| hypothetical protein OsI_27014 [Oryza sativa Indica Group] Length = 700 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 19/160 (11%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCT 100 KI A+ + ++ H S L + + Q + Sbjct: 505 AKIPAVLDYLGTIIEAECKFLIFAHHQSMLEAIHQHLLKKKVKCIRIDGQTPVPVRQTLV 564 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 N+ I + G GL L + ++F L W + R + G Sbjct: 565 TDFQNKDDIKAAVLSIKAGGVGLTLTA-ASTVIFAELSWTPGDLI-----QAEDRAHRIG 618 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +V +YYL+A +T+D+++ ++ K +L+ +K Sbjct: 619 QVSSVNIYYLLANDTVDDIIWDVVQGKLENLGQMLDGQEK 658 >gi|167539902|ref|XP_001741408.1| hypothetical protein [Entamoeba dispar SAW760] gi|165894110|gb|EDR22194.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 956 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 67/193 (34%), Gaps = 10/193 (5%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + EL G+ +E F + V+ + A + + I+ ++++ Sbjct: 369 RLAAELQKKKLGDKVEKFTKQIQFVELYNMTCTAKL---KGVCSFLDKMIIEGKKLLVFG 425 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLN 124 + + ++ + + + E +I + + G G+ Sbjct: 426 HHQEMLDGIENYIKESNIEYIRIDGSTNASLRAKYVDRFQKEKRIRIAILSVTAAGTGIT 485 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + +VF L+W R R + G K V ++YLI + T+D+L+ L Sbjct: 486 LHS-ADTVVFAELYWTPGVL-----RQAEDRVHRIGQKNDVRIFYLIGKQTVDDLIWPLL 539 Query: 185 RTKSTIQDLLLNA 197 K I L+ Sbjct: 540 EKKLKISGETLDG 552 >gi|2281697|gb|AAB64175.1| transcription factor [Mus musculus] Length = 1002 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 51/160 (31%), Gaps = 16/160 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ 102 + + AL + K +V F + L+ ++ K +IQ Sbjct: 830 NALMHALIELRTKDPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQ 889 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGG-NILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + G+ L + + W+ Q +R + G Sbjct: 890 RFQNTEAGSPTISTVLKAGGVGLNLCARSRVFLMDPAWNPAAEDQCFDRC-----HRLGQ 944 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K+ V + I +++++E +L+ TK + K + Sbjct: 945 KQEVIITKFIVKDSVEENMLKIQNTKRDLAAGAFATKKTD 984 Score = 36.3 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 18/80 (22%), Gaps = 7/80 (8%) Query: 2 KQYHKFQRELYCDLQ----GENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + E + + A + ++ Q+ Sbjct: 670 KIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHLLT-NGMSSSGPSRS 728 Query: 56 IKALEVIIEKANAAPIIVAY 75 E+ II++ Sbjct: 729 DTPEELRKMLIEKMKIILSS 748 >gi|145207323|gb|AAH78216.2| Zranb3 protein [Danio rerio] Length = 541 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 17/156 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEW- 104 +K ++ ++ +V H S L + + + Sbjct: 323 VKDYIKMMLESEQLKFLVFAHHLSMLQACTEAVIEAKAGYIRIDGSVPSAERIQLVHRFQ 382 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + + G GL + +VF L+W+ + R + G Sbjct: 383 NDPDTRVAVLSIQAAGQGLTFTA-ASHVVFAELYWNPGHI-----KQAEDRAHRIGQTAT 436 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V ++YLIA+ T D ++ L K T+ LN K+ Sbjct: 437 VHIHYLIAKGTFDTVMWAMLNRKETVTGSALNGKKE 472 >gi|326426540|gb|EGD72110.1| hypothetical protein PTSG_11548 [Salpingoeca sp. ATCC 50818] Length = 930 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 26/224 (11%), Positives = 66/224 (29%), Gaps = 31/224 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLA-----------NGA--VYYDEEKHWKEV 51 + ++++ L + + K +L + ++ + + + Sbjct: 214 RRLKKDVLSQLPPKRRQRVTVEVTNKKLCKLLEAGFNELKRLDSDPNTQQFESHRLLQSL 273 Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTI 101 + A +V + + L + + + Sbjct: 274 FHDTSTAKMDSGMCDAGGKFLVFAYHLNMLKALEEAVASQGVEYIMIVGETPVHERHDMV 333 Query: 102 QEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +++ + + G+ L + +VF L W I R + G Sbjct: 334 KKFQASNRCRVAILSLLAASQGITLTA-ASTVVFAELHWTPG-----IIEQAEDRAHRIG 387 Query: 161 FKRA-VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V ++YL+A NT+D+++ L K + LN + + Sbjct: 388 QTDTSVNIHYLVAPNTLDDILWSTLSRKVGVVSTTLNGERSRLV 431 >gi|295836817|ref|ZP_06823750.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|295826220|gb|EDY44436.2| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 546 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 10/137 (7%) Query: 68 AAPIIVAYHFNS-------DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 ++ F LA+ A G T D++ + + +L ++PA+ G Sbjct: 373 GKKTLIWTTFVRSLTTLERLLAKFGPASVYGGTPDREEQLRRFREDPSCMVLISNPATLG 432 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G++L + V+ + Q ++RI G + +V V L A+ T+DE+V Sbjct: 433 EGISLHQSVHDAVYVDRDFMAGRFLQSLDRIHRLGLA-PGTETSVTV--LAARGTVDEVV 489 Query: 181 LQRLRTKSTIQDLLLNA 197 RL K +L+ Sbjct: 490 AARLDRKLEFMGAILDD 506 >gi|224000229|ref|XP_002289787.1| hypothetical protein THAPSDRAFT_268687 [Thalassiosira pseudonana CCMP1335] gi|220974995|gb|EED93324.1| hypothetical protein THAPSDRAFT_268687 [Thalassiosira pseudonana CCMP1335] Length = 446 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 49/176 (27%), Gaps = 10/176 (5%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 + K Q+++ + K + VI V D Sbjct: 254 ILAPFNKLRQVSS--FAKMDATVALADSILKEEESIVIFSSFVDVAKGVQRC-LQDRGWN 310 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + K I ++ G P+ + G GL L ++ W + Sbjct: 311 GELLTGEVPSSKRQAMIDDFQSGVSPVFVCTYGAGGVGLTLTAACT-VILIDRPWTPGDV 369 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R R+ G R V ++ A IDE + L K ++ +K Sbjct: 370 -----NQAEDRVRRIGQTRPVRSIWIQA-FPIDEQIDALLDHKEVNSVTAVDGIKG 419 >gi|83771803|dbj|BAE61933.1| unnamed protein product [Aspergillus oryzae] Length = 939 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 8/151 (5%) Query: 48 WKEVHDEKIKALEVIIEKANAAPIIVAYHFN-SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 + DE I+A + I+ +++ P + R + + +N Sbjct: 689 MNSIIDESIRAGDKILVFSHSIPTLDYIEHVLRSSNRKYSRLDGRTPVVTRQDATKRFNL 748 Query: 107 G-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G + + + G GLN+ N ++ F + + E V R + G ++ V Sbjct: 749 GSEKQVYLISTRAGGLGLNI-PVANRVIIFDFKFSP-----VWEEQAVGRAYRLGQQKPV 802 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 FVY IA T +E++ + K+ + +++ Sbjct: 803 FVYRFIAGGTFEEVMYNKAVFKTQLAFRVVD 833 >gi|290466810|gb|ADD25740.1| putative helicase [Lactococcus phage 1358] Length = 577 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 85/212 (40%), Gaps = 41/212 (19%) Query: 19 NIEAFNSASKTVKCLQLANGAVY-------------------YDEEKHWKEVHDEKIKAL 59 I + S QLA+GA+Y + + + EVHD K+ AL Sbjct: 331 KITTEHIFSVINALRQLASGAIYEQLDTTGLDEEEIAERYNEHMKNRKHIEVHDAKLDAL 390 Query: 60 EVIIEKANAAPI-IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 IIE+ V+Y ++ R + + + WN GKIP+L A+PAS Sbjct: 391 ADIIEREQDNVFVFVSYKHEAERIRQRFEGVRFLNTANAAEVLPLWNAGKIPVLVANPAS 450 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA------ 172 GLN+Q GG+ +V++S+ + E Q R+ + G K V VY L + Sbjct: 451 TKFGLNMQDGGHTIVWYSMGYSFEAFTQSNARLA-----RQGQKHEVKVYMLQSWLAPIQ 505 Query: 173 ----------QNTIDELVLQRLRTKSTIQDLL 194 TID ++ + K + D + Sbjct: 506 DDTQLEDIMRAQTIDSAIMDAIDEKRELNDGV 537 >gi|295674753|ref|XP_002797922.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226280572|gb|EEH36138.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1797 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 47/118 (39%), Gaps = 7/118 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + + + +N G + + G GLN+ G N ++ F ++ Sbjct: 1381 RTYSRLDGKTPIATRQISTKNFNSGSYTQVYLISTRAGGLGLNI-PGANRVIIFDFQFNP 1439 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E V R + G ++ VFVY +A T ++++ + K+ + +++ + Sbjct: 1440 T-----WEEQAVGRAYRLGQRKPVFVYRFLAGGTFEDIMHNKAVFKTQLSYRVIDKMN 1492 >gi|170070634|ref|XP_001869654.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167866544|gb|EDS29927.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 104 Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ + G GLNL G N L+ L W+ + E R + G K+ V+++ Sbjct: 4 KIMLLSLTAGGVGLNL-VGANHLMLLDLHWNPQL-----EAQAQDRVYRVGQKKPVYIWK 57 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +T+++ ++ + K + L K Sbjct: 58 FMCTDTVEQKIMGLQQKKLDLATQALTGTK 87 >gi|296815474|ref|XP_002848074.1| conserved hypothetical protein [Arthroderma otae CBS 113480] gi|238841099|gb|EEQ30761.1| conserved hypothetical protein [Arthroderma otae CBS 113480] Length = 1049 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 53/147 (36%), Gaps = 17/147 (11%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIP 110 ++ + I + F ++ L + + E KI Sbjct: 862 WLQDSPGTKITIFTQFIGMMSILCSLCETEGWGYTTLSGKLSHATRHANIKRFREEEKIN 921 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + + G GL+L + LWW+ + IE+ R + G K+ V + + Sbjct: 922 ILISSLKAGGVGLDLT-MATKCILLDLWWN-----EAIEQQAFCRLFRIGQKKDVEIIRI 975 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 NT+D+ + TKS + ++ + Sbjct: 976 CVDNTVDDRIQLLQSTKSAHIEEVMGS 1002 >gi|302680130|ref|XP_003029747.1| hypothetical protein SCHCODRAFT_58967 [Schizophyllum commune H4-8] gi|300103437|gb|EFI94844.1| hypothetical protein SCHCODRAFT_58967 [Schizophyllum commune H4-8] Length = 939 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 36/156 (23%) Query: 52 HDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCT 100 KI L +++ A +V F S L ++ + Sbjct: 792 SSAKIDQLVKLLQLNPPADKSLVFSQFTSFLDKVSCQRWMRCIPYVRFDGQMSGKRREEA 851 Query: 101 IQEWNEG----------------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 I+ ++ ++ + GLNL N+ ++ Sbjct: 852 IRRFSVPIKPTDTAASNWLPGGVNPKVMLISLKAGALGLNLTVANNVYLW---------W 902 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 Q+ IE + R + G + V VY +IA++T++ V Sbjct: 903 QEGIESQAIDRVNRIGQTKPVHVYQMIAEDTVESKV 938 >gi|225684822|gb|EEH23106.1| DNA repair protein RAD5 [Paracoccidioides brasiliensis Pb03] Length = 936 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 74/216 (34%), Gaps = 26/216 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y R+ + Q + + + + K Q Y K + + +E Sbjct: 720 YSAITRQGFEKFQAYQLSSRQNPKQAKKFGQ------YEGPHTKTKALISHLLDTIEESK 773 Query: 64 EKANA--APIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEG-KI 109 + IV + S L +Q A +L + + + + + Sbjct: 774 KSPEKAPIKSIVFSSWTSHLDLIQIAMEDNGITSFTRLDGTMSLKQRNAALDAFRDDDNV 833 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G GLNL G+ ++ Q ++R+ + G R V Sbjct: 834 TILLATLGAGGVGLNLTS-GSRAYIMEPQYNPAAIAQAVDRV-----HRLGQTREVTTIQ 887 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I +++I+E + + R K + D+ LN + + + Sbjct: 888 FIMKDSIEEKIAELARKKQQMADMSLNRGRLDRREL 923 >gi|229821239|ref|YP_002882765.1| helicase [Beutenbergia cavernae DSM 12333] gi|229567152|gb|ACQ81003.1| helicase domain protein [Beutenbergia cavernae DSM 12333] Length = 672 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 F R + T ++ + ++ ++ + G G+NLQ ++++ Sbjct: 522 FARRGLRYASIRGEQTTAVRERNVTAFLEDPEVAVVVCSLTAAGVGINLQVASDLVLAEL 581 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W D E+ + R + G + V + +IA TID + + + K+ + L+ Sbjct: 582 SWTDAEQT------QAIDRVHRIGQSQPVTAWRIIAAQTIDARIAELIDAKAGLAARALD 635 Query: 197 A 197 Sbjct: 636 G 636 >gi|294876194|ref|XP_002767598.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] gi|239869258|gb|EER00316.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] Length = 511 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 6/95 (6%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + G GLNL G L LWW+ +E + R + G + V +Y Sbjct: 390 KVLLVSLRAGGVGLNLTA-GRTLYLLDLWWNPA-----VEEQAMMRVHRLGQQHTVRIYR 443 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + +++ID+ ++ KS + ++ +A + Sbjct: 444 FVVRDSIDQRIMSLQAGKSRLTNMAFDASDAAALQ 478 >gi|34533780|dbj|BAC86802.1| unnamed protein product [Homo sapiens] Length = 1225 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 18/190 (9%), Positives = 47/190 (24%), Gaps = 34/190 (17%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYD-------------EEKH 47 K Y + L + + + + N + + Sbjct: 958 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGS 1017 Query: 48 WKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-------- 97 K+ L+ +++K +++ L L+ + Sbjct: 1018 SLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1077 Query: 98 --PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I +N + G G+NL + ++ + W+ + Sbjct: 1078 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINL-ATADTVIIYDSDWNP-----HNDIQAF 1131 Query: 154 TRQRQAGFKR 163 +R + G + Sbjct: 1132 SRAHRIGQTK 1141 >gi|238594429|ref|XP_002393482.1| hypothetical protein MPER_06777 [Moniliophthora perniciosa FA553] gi|215461019|gb|EEB94412.1| hypothetical protein MPER_06777 [Moniliophthora perniciosa FA553] Length = 207 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 49/162 (30%), Gaps = 25/162 (15%) Query: 46 KHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQK----------AFPQGRT 93 K+ L I + I + S L ++K F Sbjct: 39 GDDDLEPSTKMLKLIDYISKWETIGDKTICYSQWTSMLDLIEKLFSRYGIRSVRFDGKMD 98 Query: 94 LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + ++ G GLNL N ++ + W+ E Sbjct: 99 RTSREQALSTFKSPTGPKVILISTKCGGVGLNLVA-ANRVINMDVSWNFAA-----ESQA 152 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVL------QRLRTKS 188 R + G ++ V++ L+ NTI+E +L + + K Sbjct: 153 YDRAHRIGQEKNVYIKRLVVANTIEERMLSTSGSPKLVSRKL 194 >gi|312599275|gb|ADQ91298.1| hypothetical protein BpV2_131 [Bathycoccus sp. RCC1105 virus BpV2] Length = 478 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 79/221 (35%), Gaps = 29/221 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYD--------EEKHWKEVHDEKI 56 + ++++ N+ ++ Q Y E + E +K+ Sbjct: 243 QEMIKDIFRTAVNVNMHNMEIFECLLRARQSMIYPQMYINGIAKKRGEIPEFWEGRSKKM 302 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-------GRTLDKDPCTIQEWN-EGK 108 + L +I + +V F ++ + + + + ++ +N + Sbjct: 303 ETLFKLISEHPDEKTLVFCQFKQEMDYIHENLSCPVFRIDGSVSKEDREKQLKLFNEAPQ 362 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L + G GLN+Q + + F + W+ + R ++G KR V+V Sbjct: 363 NSVLLIQVKAGGQGLNIQ-CASRIYFTAPCWNPATEL-----QAIGRAHRSGQKRTVYVK 416 Query: 169 YLIAQNT-----IDELVLQRLRTKSTIQDLLL--NALKKET 202 L+ +T +++ ++ KS + +L + LK + Sbjct: 417 KLVYGDTPGYPSVEQAMIALQGHKSLLSAEVLRDDRLKTQI 457 >gi|242023012|ref|XP_002431930.1| helicase, putative [Pediculus humanus corporis] gi|212517281|gb|EEB19192.1| helicase, putative [Pediculus humanus corporis] Length = 882 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 8/101 (7%) Query: 97 DPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 P I ++N K I ++ G GGN LV W+ + Q +RI Sbjct: 763 RPKIIDDFNNPKTGIKVMLLSLT-AGGVGLNLVGGNRLVIIEPHWNPQLESQACDRI--- 818 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G K+ V+VY +I Q TI+E + + K + + +L Sbjct: 819 --YRVGQKKPVYVYKIICQETIEERIELLQKKKLEVAETVL 857 >gi|149637050|ref|XP_001510449.1| PREDICTED: similar to zinc finger, RAN-binding domain containing 3 [Ornithorhynchus anatinus] Length = 1115 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 62/209 (29%), Gaps = 29/209 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K R + + + + K +K ++ Sbjct: 315 EKLMRASASGTTENSGDFSRAMGLITRL------------FKETTLAKAGAVKDYIKLML 362 Query: 65 KANAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + + +V H S L R + + ++ Q + + Sbjct: 363 QNESLKFLVFAHHLSMLQACTEAAVENKVRYIRIDGSVPSSERMHLVQQFQKDPDTRMAV 422 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GL +VF L+WD + R + G +V ++YLIA Sbjct: 423 LSIQAAGQGLTFTA-ATHVVFAELYWDPGHI-----KQAEDRAHRIGQCSSVNIHYLIAN 476 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 T+D ++ L K+ I LN K+ Sbjct: 477 GTLDSVMWGMLNRKAGITGSTLNGRKERL 505 >gi|288553361|ref|YP_003425296.1| Snf2/Rad54 family helicase [Bacillus pseudofirmus OF4] gi|288544521|gb|ADC48404.1| Snf2/Rad54 family helicase [Bacillus pseudofirmus OF4] Length = 560 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 71/196 (36%), Gaps = 14/196 (7%) Query: 9 RELYCDLQGENIEAFNS----ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 RE IE + K L + G K K + K +VII Sbjct: 315 REAAFMTLKNMIEKAQKDGRTLPQAEKLLHMIGG--IDGHAKAEKALELVKKINDKVIIF 372 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 A + + F G K Q + +L A + G G+N Sbjct: 373 TEYRATQLYLQWYLKQNGISSVPFRGGFKRGKKDWMRQLFES-HAQVLIAT-EAGGEGIN 430 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ+ + ++ F L W+ +Q I RI + G K V +Y ++T+++ +L+ L Sbjct: 431 LQF-CSHIINFDLPWNPMRIEQRIGRI-----HRLGQKNDVHIYNFAVEDTVEQHILKLL 484 Query: 185 RTKSTIQDLLLNALKK 200 K + + ++ L + Sbjct: 485 YEKIHLFESVIGELDE 500 >gi|224110292|ref|XP_002315473.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222864513|gb|EEF01644.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 670 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 54/160 (33%), Gaps = 19/160 (11%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCT 100 KI + + ++ H S + + + + + Sbjct: 475 AKISGVLDYLGTVIEAGCKFLIFAHHQSMIDSIHEFLLKKKVGCIRIDGKTAAASRQALV 534 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + I + G GL L + ++F L W + R + G Sbjct: 535 TDFQEKDAIKAAVLSIRAGGVGLTLTA-ASTVIFAELSWTPGDLI-----QAEDRAHRIG 588 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +V +YYL+A +T+D+++ +++K +L+ +K Sbjct: 589 QVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQMLDGQEK 628 >gi|193084404|gb|ACF10057.1| SNF2-related protein [uncultured marine crenarchaeote SAT1000-21-C11] Length = 569 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 52/151 (34%), Gaps = 6/151 (3%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE 106 H + I +E + I S A G+T I + Sbjct: 400 HHVIDFVKNIMEIEESVVVFCHHKSIHKLLHESLQEFNPAAIIGGQTDKVRQENIDNFQN 459 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G L+ + G+NL ++F L W I R R + G K VF Sbjct: 460 GGTKLIVVGLRAGNLGINLTR-AKYVIFAELDWSPA-----IHRQAEDRLHRIGQKNTVF 513 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 YYLI + T+DE V L KS D +++ Sbjct: 514 AYYLIGKRTLDEHVANILVDKSYEIDAIMDE 544 >gi|156089377|ref|XP_001612095.1| helicase [Babesia bovis T2Bo] gi|154799349|gb|EDO08527.1| helicase conserved C-terminal domain containing protein [Babesia bovis] Length = 879 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 14/150 (9%) Query: 57 KALEVIIEKANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKDPCTIQEWNEG 107 + +I+ + I + F D + ++ + N Sbjct: 705 DYVLHLIKSSVKFIIFAHHMFMMDAIEQVLKAQHCCYMRIDGSTNAQQRESRVTEFQNNS 764 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 K + +CG GLNL + +VF L W + Q +R R + + Sbjct: 765 KCRVALLSLTACGVGLNLTS-SSTVVFAELHWVPGQMIQAEDRAHR----MGTKHRIINI 819 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +YLIA+ +I+E + + + K LN Sbjct: 820 HYLIAEGSIEETMWRVVSRKWETVTATLNG 849 >gi|66821527|ref|XP_644229.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60472422|gb|EAL70375.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1400 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 7/110 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + N + + G GL L N++VF L+W R Sbjct: 1056 QRQAFVTKFQNNASCKVALLSITAAGTGLTLTA-SNLVVFVELYWTPGVL-----RQAED 1109 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G + +++YLI +NT+D+ + + K + L+ ++E +H Sbjct: 1110 RIHRIGQTKTCYIHYLIGKNTLDDRIWPTICNKLEVLGETLDG-QEEVLH 1158 >gi|297243714|ref|ZP_06927645.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis AMD] gi|296888465|gb|EFH27206.1| superfamily II DNA/RNA helicase, SNF2 family [Gardnerella vaginalis AMD] Length = 735 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 16/169 (9%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR--------TLDKDP 98 + K+ V + +++ + L ++ AF + +K Sbjct: 530 DMRNSSKAKLLKEIVEEAELEERKVLIFSFYLDTLHKVVDAFSNKCIGLINGSVSPEKRI 589 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+E+ N +L + S G GLN+Q +++V E ++R Sbjct: 590 KIIEEFDNAPAGSVLVSQIMSGGTGLNIQS-ASVVVICEPQLKPST-----ENQAISRAY 643 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKETIHV 205 + G R V VY+L+A+ TIDE + + L K I + + ++ + + + Sbjct: 644 RMGQSRDVIVYHLLAEKTIDEGITKVLENKQEIFNRFADESVAAQKVEI 692 >gi|255541636|ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis] gi|223549062|gb|EEF50551.1| Chromo domain protein, putative [Ricinus communis] Length = 2248 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 67/222 (30%), Gaps = 58/222 (26%) Query: 30 VKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 ++ + N + + K+ L+ I+ K +++ L Sbjct: 1305 MELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLD 1364 Query: 83 RLQKAFPQGRTLDKD----------PCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGN 130 L++ R + + I ++N + + G GLNLQ + Sbjct: 1365 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQS-AD 1423 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ----------------- 173 ++ + + + E V R + G KR V V Y+ A Sbjct: 1424 TVIIYDPDPNPKN-----EEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGG 1478 Query: 174 ---------------NTIDELVL-QRLRTKSTIQDLLLNALK 199 +I+ L+ + K + D ++NA + Sbjct: 1479 TIDLEDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGR 1520 >gi|317128397|ref|YP_004094679.1| helicase [Bacillus cellulosilyticus DSM 2522] gi|315473345|gb|ADU29948.1| helicase domain protein [Bacillus cellulosilyticus DSM 2522] Length = 542 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A + F + F G K Q + + + +L A + G Sbjct: 372 IIFTEYRATQLYLQWFLAQNGIKSVPFRGGFKRSKKDWMKQLFKD-QAQVLIAT-EAGGE 429 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ + ++ + L W+ +Q I RI + G ++ V +Y ++T+++ +L Sbjct: 430 GINLQF-CHRMINYDLPWNPMRIEQRIGRI-----HRLGQEKDVEIYNFAVKDTVEDHIL 483 Query: 182 QRLRTKSTIQDLLLNAL 198 + L K + + ++ L Sbjct: 484 KLLYKKIGLFEGVIGKL 500 >gi|307105038|gb|EFN53289.1| hypothetical protein CHLNCDRAFT_136932 [Chlorella variabilis] Length = 1383 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 56/151 (37%), Gaps = 19/151 (12%) Query: 45 EKHWKEVHDEKIKALEVIIE-KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------ 97 K+ D K++ + ++ K + ++V + + L +++ P+ +D Sbjct: 1011 YKNVTYTFDSKVEKVLDVLRGKGASEKVVVFSEYKALLQAVKRRLPELGLDSRDLLTNAK 1070 Query: 98 ------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + F + G G+ L G + +V + E Sbjct: 1071 SVEKRGQAIADFQQAPPTQVFFLTHRTGGAGVTLTAGTH-VVLCEPVLNPA-----FEEQ 1124 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + R + G +RAV V LI + TI+E +++ Sbjct: 1125 AIGRCNRLGQQRAVTVTRLIMKGTIEEKIVE 1155 >gi|56964261|ref|YP_175992.1| DNA/RNA helicase [Bacillus clausii KSM-K16] gi|56910504|dbj|BAD65031.1| SNF2 family DNA/RNA helicase [Bacillus clausii KSM-K16] Length = 559 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 76/195 (38%), Gaps = 25/195 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + ++E G +E N A+ +G ++ + D+K+ II Sbjct: 329 YEQEEKET-----GAIVELLNEATAV-------DGHAKAEKALELIQKIDDKV-----II 371 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 A + F F G K + + + +L A + G G+ Sbjct: 372 FTEYRATQLYLQWFLKQHGITSVPFRGGFKRGKKDWMRELFQK-HAQVLIAT-EAGGEGI 429 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ+ + ++ + L W+ +Q I R+ + G + V +Y Q+T+++ +L+ Sbjct: 430 NLQF-CHHIINYDLPWNPMRVEQRIGRL-----HRLGQEHDVRIYNFAVQHTVEQHILEL 483 Query: 184 LRTKSTIQDLLLNAL 198 L K + + ++ L Sbjct: 484 LYEKIHLFESVIGEL 498 >gi|242066540|ref|XP_002454559.1| hypothetical protein SORBIDRAFT_04g033300 [Sorghum bicolor] gi|241934390|gb|EES07535.1| hypothetical protein SORBIDRAFT_04g033300 [Sorghum bicolor] Length = 1484 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 8/102 (7%) Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N+ K ++ A +C G+ L G + +V + W+ + R + Sbjct: 1250 RQTMMEVFNDMKSKAKVMLASTKACCEGITL-IGASRVVLLDVVWNPS-----VGRQAIG 1303 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G ++ V+ Y LIAQ T ++ K + LL + Sbjct: 1304 RAYRIGQEKIVYTYNLIAQGTREKSKYDTQAKKEHMSKLLFS 1345 >gi|300727020|ref|ZP_07060439.1| SNF2 N-terminal domain protein [Prevotella bryantii B14] gi|299775564|gb|EFI72155.1| SNF2 N-terminal domain protein [Prevotella bryantii B14] Length = 654 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 30/252 (11%), Positives = 72/252 (28%), Gaps = 59/252 (23%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYD---------------- 43 + Y + +++ + + +K ++ Q+A + Sbjct: 373 RIYEFIEERFVEEVENRESDIHSVLVRAKAIRLQQVATNPILLRAPLSQFTEEAGVDFST 432 Query: 44 -EEKHWKEVHDEKIKALEVIIEKAN------------AAPIIVAYHFNSDLARLQKAFPQ 90 E++ + D + I K ++V F + Q Sbjct: 433 VEQEDSMIMSDVMRYYEDEIPAKYEVCAQLINDIIKDGGKVVVWAIFIKTIETFQSYLDS 492 Query: 91 GRTLDK-----------------------DPCTIQEWNEGKI--PLLFAHPASCGHGLNL 125 + I+E++ ++ A+P + ++L Sbjct: 493 IGIKSRALYGATPVATDGMTEDDVNYELTREAIIKEFHNPDSEFKVIIANPFAVAESISL 552 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ ++ Q +RI G YYLI+Q+T+D + RL Sbjct: 553 HKACHNAIYLERSFNCAHFVQSKDRIHRYG---LGPDVVTNYYYLISQDTVDCTINDRLH 609 Query: 186 TKSTIQDLLLNA 197 K ++ + Sbjct: 610 EKEARMIAIIES 621 >gi|253744877|gb|EET01014.1| Transcription regulatory protein SNF2 [Giardia intestinalis ATCC 50581] Length = 2074 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 56/159 (35%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKANA--APIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCT 100 K++ L+ I+ K + +++ F F Sbjct: 1101 SGKLELLDNILAKLHKTSHRVLIFSQFKKVLDVLSSYLHYRQYKFVRFDGSVKDVDRNTM 1160 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ +N+ + + HGLNLQ + ++ F ++ ++ R + Sbjct: 1161 IRGYNKEDSKDFIFLLSTRAASHGLNLQT-ADTVIIFDCDYN-----GTYDQQAQDRCYR 1214 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G V V+ L + I+ +L +K ++ ++++A Sbjct: 1215 LGQVNPVKVFKLYSNTAIESKMLSVATSKLSLATIVMDA 1253 >gi|255556614|ref|XP_002519341.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus communis] gi|223541656|gb|EEF43205.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus communis] Length = 674 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 75/218 (34%), Gaps = 36/218 (16%) Query: 8 QRELYCDLQGENIEAFNSASKTV-----KCLQLANGAVYYDEEKHWKEVH---------- 52 +++++ DL ++++ N+ + + K A + E + E + Sbjct: 419 RQQVFLDLAEKDMKKINALFRELEVVKGKIK--ACSSAEEVESLKFSEKNIINKIYTDSA 476 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPC 99 + KI + + ++ H + + + + + + Sbjct: 477 EAKIPGVLDYLATVIEAGCKFLIFAHHQPMIDSIHEFLVKKKVGCIRIDGRTPPVSRQSL 536 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + I + G GL L + ++F L W + R + Sbjct: 537 VTDFQEKDAIKAAVLSIKAGGVGLTLTA-ASTVIFAELSWTPGDLI-----QAEDRAHRI 590 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G +V +YYL+A +T+D+++ +++K +L+ Sbjct: 591 GQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQMLDG 628 >gi|302839932|ref|XP_002951522.1| hypothetical protein VOLCADRAFT_92108 [Volvox carteri f. nagariensis] gi|300263131|gb|EFJ47333.1| hypothetical protein VOLCADRAFT_92108 [Volvox carteri f. nagariensis] Length = 2115 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 6/101 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIE 149 G + ++ +L + G L + + E Sbjct: 1988 GNPAARQAALQSFLHDPTCRVLLLLKSHSGGAAGLSLTVAHTAFMLEPAVNPGL-----E 2042 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G R V +IA++T+++ VL + K + Sbjct: 2043 AQAAARICRLGQDRPTRVIRIIAKHTVEDRVLAMQQYKQQL 2083 >gi|300708724|ref|XP_002996536.1| hypothetical protein NCER_100376 [Nosema ceranae BRL01] gi|239605845|gb|EEQ82865.1| hypothetical protein NCER_100376 [Nosema ceranae BRL01] Length = 594 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 6/102 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T + + N G + + +C GL L ++VF L+W+ Q +RI Sbjct: 471 TSHRQRLVNEFQNNGNVRVALLSVTACNTGLTLTA-AKLVVFAELYWNPGTLLQAEDRI- 528 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G +V ++YL+ + T+DE V L K + L Sbjct: 529 ----HRIGQSSSVDIHYLVCKGTVDEYVWPILLKKLNVLQSL 566 >gi|317121963|ref|YP_004101966.1| helicase [Thermaerobacter marianensis DSM 12885] gi|315591943|gb|ADU51239.1| helicase domain protein [Thermaerobacter marianensis DSM 12885] Length = 524 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 73/226 (32%), Gaps = 36/226 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLAN--GAVY-----------------Y 42 + Y R + + + ++ + A+ Sbjct: 247 ELYQAVLRAVREEYAERRPYNSTVLPLLMLQREVCSSSHALRATLDRLAGSEGWQSLAWM 306 Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGR 92 + ++V + + + + P++V F + L + + Sbjct: 307 RVRELARQVEENHKALMLERLVQRLGEPVVVFTEFRATQDYLARRLRRAGVETVVYHGAM 366 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + +G +L G GLNLQ+ +V + L W+ +Q I RI Sbjct: 367 GTGERDAAKARFRQGA-RVLI-STECGGQGLNLQF-CRNVVNYDLPWNPMRVEQRIGRIH 423 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q A V V+ L A+ TI+E +L+ L K + ++ + Sbjct: 424 RLGQEAAS----VRVFNLYARRTIEEYILRLLDEKINLFRQVIGEI 465 >gi|242209777|ref|XP_002470734.1| predicted protein [Postia placenta Mad-698-R] gi|220730204|gb|EED84065.1| predicted protein [Postia placenta Mad-698-R] Length = 998 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 10/99 (10%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D+ P + + + + + G GLNL G N +V F + + Sbjct: 670 QDRMPLIDKFHEDPDVFVFLISTMAGGTGLNLT-GANKVVIFD---------PAHDLQAI 719 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 R + G R V V+ L+ +I+EL+ R K Sbjct: 720 DRAYRFGQTRDVSVFRLLGAGSIEELIYARQVYKQQQMQ 758 >gi|217968742|ref|YP_002353976.1| helicase [Thauera sp. MZ1T] gi|217506069|gb|ACK53080.1| helicase domain protein [Thauera sp. MZ1T] Length = 1037 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 69/205 (33%), Gaps = 14/205 (6%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + E++ + N + + +A + + +D ++ L+ Sbjct: 468 EELESEVFELYGDAEDNEKRPNLGALLRTLVGIARRVGDHTALESVDSKYDMLVRNLKQY 527 Query: 63 IEKANAAPIIVAYHFNSDLAR-------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I++ + + L ++ + + P + Sbjct: 528 WAAYPGKKIVLFSFYRNTLHYLARRLAAEGIQSAVLHGGMDKHGVLRHFESTEGPDILIS 587 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G++LQ+ ++L+ + L W+ +Q I RI Q + ++ I +T Sbjct: 588 SEVASEGVDLQF-SSLLINYDLPWNPARIEQRIGRIDRIGQ----EAEKILIWNFIYTHT 642 Query: 176 IDELVLQRLRTKSTIQDLLLNALKK 200 IDE + RL + I L +++ Sbjct: 643 IDERIYDRLLERLDIFRQALGSMEA 667 >gi|120603977|ref|YP_968377.1| SNF2-related protein [Desulfovibrio vulgaris DP4] gi|120564206|gb|ABM29950.1| SNF2-related protein [Desulfovibrio vulgaris DP4] Length = 1131 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 58/218 (26%), Gaps = 34/218 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKA 58 + Y + + D +A + ++ Sbjct: 749 QAYRQALNKAVEDAGRPGAT----LEALQHIRTIALHPFTPAWGTMTPDAFVNASARLMG 804 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL------------DKDPCTIQEW 104 ++ + +V L + Q K + + Sbjct: 805 TFELLTDIRSKGEKALVFVEVKHMQMILAELLQQRFDCEQVLIINGEVSGPKRQERVHAF 864 Query: 105 NEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 K + P + G GL L ++ + WW+ Q +R + G + Sbjct: 865 QTRKGFDAILLSPKAAGVGLTLTA-ATHVIHLNRWWNPAVEDQCTDR-----AYRIGQQH 918 Query: 164 AVFVYYLIAQN------TIDELVLQRLRTKSTIQDLLL 195 V V+Y +A + + D + + L K ++ LL Sbjct: 919 DVTVHYPMAIHPQLGDASFDVKLHELLERKRSLSRDLL 956 >gi|56475577|ref|YP_157166.1| helicase/SNF2 domain-containing protein [Aromatoleum aromaticum EbN1] gi|56311620|emb|CAI06265.1| helicase/SNF2 family domain protein [Aromatoleum aromaticum EbN1] Length = 883 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 48/112 (42%), Gaps = 9/112 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +N G+I + G G++LQ + L+ L W+ Q + R+ Sbjct: 515 REDVCDAFNAGEIR-FLISTEAGGEGIDLQEHCSALIHVDLPWNPMRLHQRVGRL----- 568 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS-TIQDLLLNALK--KETIHV 205 + G ++V V L +T++ ++ ++L K I L +A+ ++ + + Sbjct: 569 NRYGQTQSVEVVSLRNPHTVESMIWEKLEEKLGNIMLALGSAMDEPEDLLQL 620 >gi|239827701|ref|YP_002950325.1| SNF2-related protein [Geobacillus sp. WCH70] gi|239807994|gb|ACS25059.1| SNF2-related protein [Geobacillus sp. WCH70] Length = 555 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A + F F G K + + + A + G Sbjct: 371 IIFTEYRATQLYLQWFLKQHGISSVPFRGGFKRGKKDWMKELFKN-HAQVFIAT-EAGGE 428 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ ++ + L W+ +Q I R+ + G V++Y +NT++E +L Sbjct: 429 GINLQF-CRHVINYDLPWNPMRLEQRIGRV-----HRLGQTNDVYIYNFAVKNTVEEHIL 482 Query: 182 QRLRTKSTIQDLLLNAL 198 L K + + ++ L Sbjct: 483 TLLYEKIRLFERVVGQL 499 >gi|297745316|emb|CBI40396.3| unnamed protein product [Vitis vinifera] Length = 1981 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 57/172 (33%), Gaps = 15/172 (8%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 ++ + N + + ++ + K + + + Sbjct: 1201 MELRKACNHPLLNYPYFNDFSKDFLVRSCGKITMTKLLDILE----EYLQWRRLVYRRID 1256 Query: 90 QGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +L+ I ++N + + G GLNLQ + +V + + + Sbjct: 1257 GTTSLEDRESAIVDFNSAGSDCFIFLLSIRAAGRGLNLQS-ADTVVIYDPDPNPKN---- 1311 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E V R + G R V V Y+ A + I + + K + D ++NA + Sbjct: 1312 -EEQAVARAHRIGQTREVKVIYMEAVSLIRNNI---QQYKIDMADEVINAGR 1359 >gi|302559406|ref|ZP_07311748.1| SNF2 family helicase [Streptomyces griseoflavus Tu4000] gi|302477024|gb|EFL40117.1| SNF2 family helicase [Streptomyces griseoflavus Tu4000] Length = 608 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 10/137 (7%) Query: 68 AAPIIVAYHFNS-------DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +V F LA Q A G T D++ + + +L ++PA+ G Sbjct: 439 GRKTLVWASFVRSITSLQRLLAPFQPAAVHGGTQDREAELRRFREDPACSVLISNPATLG 498 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 G++L + V+ + Q ++RI + L A T+DE+V Sbjct: 499 EGISLHQDCHDAVYIDRDFQAGRFLQSLDRIHRLG---LSPDVETRITVLAAAGTVDEIV 555 Query: 181 LQRLRTKSTIQDLLLNA 197 RL K +L+ Sbjct: 556 AMRLAKKLEFMGRILDD 572 >gi|212638757|ref|YP_002315277.1| Superfamily II DNA/RNA helicase, SNF2 family [Anoxybacillus flavithermus WK1] gi|212560237|gb|ACJ33292.1| Superfamily II DNA/RNA helicase, SNF2 family [Anoxybacillus flavithermus WK1] Length = 547 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 65/175 (37%), Gaps = 14/175 (8%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 + K + + + + ++D+ I+ A + F Sbjct: 336 TIGALLQKMNDITDHTKAKKALELIQTINDKV------IVFTEYRATQLYLQWFFKQHGI 389 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G K + + + +L A + G G+NLQ+ + ++ + L W+ Sbjct: 390 SSVPFRGGFKRSKKDWMKELFQ-HRAQVLIAT-EAGGEGINLQF-CHHVINYDLPWNPMR 446 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +Q I R+ + G + V +Y + +NT++E + L K + + ++ L Sbjct: 447 LEQRIGRV-----HRLGQMKDVHIYNFVVRNTVEEHMFTLLYEKIRLFERVVGEL 496 >gi|308806345|ref|XP_003080484.1| transcription regulatory protein SNF2, putative (ISS) [Ostreococcus tauri] gi|116058944|emb|CAL54651.1| transcription regulatory protein SNF2, putative (ISS) [Ostreococcus tauri] Length = 1192 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 58/198 (29%), Gaps = 34/198 (17%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 ++ +L N + + + + + + Sbjct: 770 MELRKLCNHPALNYPPEKGGDFRGPDLVRACGKLWXXXXXXXLWRWTTPDGADLKYCRID 829 Query: 90 QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +L++ I E+N + + G GLNLQ + +V + + + Sbjct: 830 GTTSLEQREVAINEFNAQHSDKFIFLLSIRAAGRGLNLQT-ADTVVVYDPDPNPKN---- 884 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQN-------------------------TIDELVLQ 182 E + R + G KR V V + A + +++ V Sbjct: 885 -EEQAIARAHRIGQKREVRVIHFEAVDDAPNETQSPKDAPAGWGGPNRSYCESLESSVRN 943 Query: 183 -RLRTKSTIQDLLLNALK 199 + K+ + +++A + Sbjct: 944 VIQKQKNEMAAEIVDAGR 961 >gi|212530198|ref|XP_002145256.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210074654|gb|EEA28741.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1117 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 18/155 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKDPCTIQEWNEGKIP 110 I++ +V + S L ++ + + + I Sbjct: 956 IKEGPPIKSVVFSAWTSHLDLIEIALKDNGLDGFTRIDGTMTLAARKTALNNFAEDDSIT 1015 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + G GLNL + + ++ Q ++R+ + G R V Sbjct: 1016 ILLATIGAGGVGLNLTS-ASRVYIMEPQYNPAAVAQAVDRV-----HRLGQTREVTTVQF 1069 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I + +I+E + + + K + + + K + V Sbjct: 1070 IMKASIEEKIFEMAKKKQQLAEDSMARGKLDKREV 1104 >gi|257052989|ref|YP_003130822.1| helicase domain protein [Halorhabdus utahensis DSM 12940] gi|256691752|gb|ACV12089.1| helicase domain protein [Halorhabdus utahensis DSM 12940] Length = 971 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 18/140 (12%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKA------------FPQGRTLDKDPCTIQEWNEGKI 109 ++E+ +++ + L L ++ E+N G+ Sbjct: 478 LLEEQPDEKLLLFTEYRDTLDYLLDFVQDEPWAEEILVIHGDVDKEERARIEDEFNHGQS 537 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 LLFA + G++LQ+ +I+ + L W+ +Q I RI + G R V V+ Sbjct: 538 RLLFAT-DAASEGIDLQHSCHIMANYELPWNPNRLEQRIGRI-----HRYGQDREVKVWN 591 Query: 170 LIAQNTIDELVLQRLRTKST 189 + +T + + + L+TK Sbjct: 592 FLFDDTRESEIFEMLQTKVE 611 >gi|189205653|ref|XP_001939161.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975254|gb|EDU41880.1| DNA repair protein rad5 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1192 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 17/151 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 + ++ IIV F + + + + +L K I + + Sbjct: 1018 QILNWQKEKADVKIIVYTQFLAMIRILKRVFATEGWTCEEYHGKMSLKKRDDAIAAFADT 1077 Query: 108 KIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P+ L A G GLNL + ++ WW+ Q R + G F Sbjct: 1078 AGPVILLASLRCGGLGLNLT-MASKVIMIDPWWNSASEQ-----QAFCRVFRIGQNEKTF 1131 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + L +NT+DE ++Q K D+++ Sbjct: 1132 MSRLCVKNTVDEHLVQMQERKQEEIDVVMEE 1162 >gi|183233301|ref|XP_654593.2| helicase [Entamoeba histolytica HM-1:IMSS] gi|169801642|gb|EAL49206.2| helicase, putative [Entamoeba histolytica HM-1:IMSS] Length = 956 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 69/198 (34%), Gaps = 14/198 (7%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ + Q++ G+ +E F + V+ + A + + I+ + Sbjct: 368 LRLAAEIQKKKL----GDKVEKFTKQIQFVELYNMTCTAKL---KGVCSFLDKMIIEGKK 420 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASC 119 +++ + + + + + + E +I + + Sbjct: 421 LLVFGHHQEMLDGIETYIKENNIEYIRIDGSTNASLRAKYVDRFQKEKRIRIAILSVTAA 480 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+ L + +VF L+W R R + G K V ++YLI + T+D+L Sbjct: 481 GTGITLHS-ADTVVFAELYWTPGVL-----RQAEDRVHRIGQKNDVRIFYLIGKQTVDDL 534 Query: 180 VLQRLRTKSTIQDLLLNA 197 + L K I L+ Sbjct: 535 IWPLLEKKLKISGETLDG 552 >gi|330870035|gb|EGH04744.1| SNF2-related:helicase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 193 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 62/195 (31%), Gaps = 33/195 (16%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPII 72 + + ++ QL + K++ + ++ + + +I Sbjct: 3 EYNQIMRSDTHRFARLGALRQL---------------LERVKVRIVADLMAELDVDDKVI 47 Query: 73 VAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGH 121 + + +A L++ + K I + + ++ G Sbjct: 48 LFCEYQESVASLREHCLAMGVGCVTLVGSDSPKKRQKAIDAFQQDQDCRVFIGTRSAAGT 107 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G NL N + F L W R + G R V V +A++TID+ + Sbjct: 108 GYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAEDTIDQQLW 161 Query: 182 QRLRTKSTIQDLLLN 196 Q L K + L++ Sbjct: 162 QMLMDKRALASDLID 176 >gi|316932603|ref|YP_004107585.1| helicase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315600317|gb|ADU42852.1| helicase domain protein [Rhodopseudomonas palustris DX-1] Length = 956 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 7/148 (4%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 K +I + A + Y S L G T D ++++ + +P+L Sbjct: 526 NKDGKKVLIFTEYRATQAFILYILRSVLNIESVLIHGGHTADDKRAAVEKFEDD-VPVLI 584 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLN+ +IL+ + L W+ Q I R+ + G K+ V V+ A+ Sbjct: 585 -STEAGGEGLNMHRNCHILINYDLPWNPSRISQRIGRL-----YRYGQKQRVIVFNFHAK 638 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKE 201 +TID +L L + ++ + E Sbjct: 639 DTIDNEILGVLIDRVMAIVATMSKVSAE 666 >gi|193084056|gb|ACF09729.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote KM3-86-C1] Length = 569 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 52/151 (34%), Gaps = 6/151 (3%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE 106 H + I +E + I S A G++ I + Sbjct: 400 HHVIDFVKNIMEIEESVVVFCHHKYIHKLLHESLQEFNPAAIIGGQSDKVRQENIDNFQN 459 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G L+ + G+NL ++F L W I R R + G K VF Sbjct: 460 GGTKLIIVGLRAGNLGINLTR-AKYVIFAELDWSPA-----IHRQAEDRLHRIGQKNTVF 513 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 YYLI + T+DE V L KS D +++ Sbjct: 514 AYYLIGKRTLDEHVANILVDKSYEIDAIMDE 544 >gi|66800837|ref|XP_629344.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60462710|gb|EAL60912.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 2205 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 8/117 (6%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 R I ++N+ I L + G NL GG ++ L W+ Sbjct: 1937 RDYFRLDGSTPTKTRQRLIDQFNDMANDIKLFLISTKAGSLGTNLT-GGTRVILMDLSWN 1995 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +R V R + G K V VY L+ T ++ ++ K T+ +++ Sbjct: 1996 P-----VHDRQAVYRCYRMGQKNQVHVYTLVMAGTGEQKTYTQMIYKQTLSKRAVDS 2047 >gi|171692537|ref|XP_001911193.1| hypothetical protein [Podospora anserina S mat+] gi|170946217|emb|CAP73018.1| unnamed protein product [Podospora anserina S mat+] Length = 1920 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 16/157 (10%), Positives = 43/157 (27%), Gaps = 47/157 (29%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDP 98 K+ L+ ++ + +++ + + +++ + Sbjct: 1663 DSGKLAKLDELLRQLKEGGHRVLLYFQMTRMIDLMEEYLTYCNYRYCRLDGSTKLEDRRD 1722 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +I + + R + Sbjct: 1723 TVSDFQTRPEIFIFLLSTR----------------------------------AMDRAHR 1748 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G + V VY LI + TI+E + +R K +Q +++ Sbjct: 1749 LGQTKQVTVYRLITRGTIEERIRKRAMQKEEVQRVVI 1785 >gi|114558332|ref|XP_001157980.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform 7 [Pan troglodytes] Length = 802 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 71/200 (35%), Gaps = 34/200 (17%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +++Y ++E SAS+ K LQ K K Sbjct: 234 IQRYQDIEKE------------PESASELHKLLQ----PFLLRRVKAEVATELPKKTE-- 275 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPA-- 117 + + + ++ + L ++ ++ N ++ HP Sbjct: 276 --VVIYHGMSALQKRYYKAIL-----MKDLDAFENETAKKVKLQNILSQLRKCVDHPYLF 328 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL + ++F ++ + + R + G ++V V LI ++T++ Sbjct: 329 DGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQNKSVKVIRLIGRDTVE 382 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E+V ++ +K + ++++ Sbjct: 383 EIVYRKAASKLQLTNMIIEG 402 >gi|134055899|emb|CAK37377.2| unnamed protein product [Aspergillus niger] Length = 987 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 49/164 (29%), Gaps = 16/164 (9%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 D + + + L I + IV + L L F Q Sbjct: 822 PYPIDSPQANDVYPSKLVTLLTDIRKHYLEDKSIVFSFWRQSLDVLGGMFDQNSISFCRV 881 Query: 91 ---GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + + + N + +L + GLN + + W+ Sbjct: 882 DGIMSPMKRQTMLEEFQNNSAVRVLLMTIGTGAVGLNNLSVASRVHILEPQWNPS----- 936 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +E + R + G + ++V + + T+++++ K + Sbjct: 937 VESQAIGRALRWGQGKKIYVIRYVMEGTVEKIIESGQLRKLQLS 980 >gi|147677193|ref|YP_001211408.1| hypothetical protein PTH_0858 [Pelotomaculum thermopropionicum SI] gi|146273290|dbj|BAF59039.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 1114 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 67/195 (34%), Gaps = 20/195 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + ++ L + +E +K + ++ + + K + Sbjct: 441 EEIEKLDALVLLAKEVEKQEIETKLNRLREVIEEERLRETGTKLLIFTESK--DTLEYLA 498 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + G +D E+ + ++ A A+ G+N Sbjct: 499 EKIGKK----------WGYSVTTVHGGMGMDARIRAEHEFKN-RAQVMVATEAAG-EGIN 546 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ+ ++V + + W+ +Q + RI + G K V +Y L+A +T + +L++L Sbjct: 547 LQF-CWLMVNYDIPWNPNRLEQRMGRI-----HRYGQKSEVHIYNLVAADTREGRILEKL 600 Query: 185 RTKSTIQDLLLNALK 199 K L + + Sbjct: 601 FEKLNRMREHLGSDR 615 >gi|224064045|ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222843090|gb|EEE80637.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2222 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 70/229 (30%), Gaps = 60/229 (26%) Query: 30 VKCLQLANGAVYYDEE-----KHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 ++ + N + K + K+ L+ I+ K +++ L Sbjct: 1284 MELRKTCNHPLLNYPYFNDLSKDFLVKSCGKLWVLDRILIKLQRTGHRVLLFSTMTKLLD 1343 Query: 83 RLQKAFPQGRTLDKD----------PCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGN 130 L++ R + + I ++N + + G GLNLQ + Sbjct: 1344 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPGSDCFIFLLSIRAAGRGLNLQS-AD 1402 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ----------------- 173 +V + + + E V R + G R V V Y+ A Sbjct: 1403 TVVIYDPDPNPKN-----EEQAVARAHRIGQTREVKVIYMEAVVNKISSCQKEDELRSGG 1457 Query: 174 ---------------NTIDELVL-QRLRTKSTIQDLLLNALK--KETIH 204 +I+ L+ + K + D ++NA + + T H Sbjct: 1458 TVDLEDDLVGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTH 1506 >gi|209875457|ref|XP_002139171.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] gi|209554777|gb|EEA04822.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 838 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 93 TLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + +I+ +NE I +L GLNL + ++ W+ + + Sbjct: 672 PKKQRISSIRSFNEQKDILVLLLSKQIGSVGLNLTT-ADRIIIVDPHWNPAQ-----DDQ 725 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R + G K V VY LI+ I++ + K+ I L+ K++ Sbjct: 726 AIGRAFRIGQKEDVVVYRLISSGAIEDWKFRLQIHKAGIAHFFLHGQKQKVT 777 >gi|115728810|ref|XP_792529.2| PREDICTED: similar to MGC108253 protein, partial [Strongylocentrotus purpuratus] gi|115946919|ref|XP_001183580.1| PREDICTED: similar to MGC108253 protein, partial [Strongylocentrotus purpuratus] Length = 338 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 70/185 (37%), Gaps = 21/185 (11%) Query: 32 CLQLANGAVYYDEEKHWKEV--HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA 87 +L + E + +++ K + L+ ++ + + +++ F L +Q+ Sbjct: 141 LHRLCHEYSGLREYRLDQDLVTQSGKFQLLDKMLAELKEQGSRVLLFSQFVMVLDIVQEY 200 Query: 88 ----------FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + I ++N + + + G G+NL N ++ Sbjct: 201 LKIRGHKFVRMDGQTPVAERAQLIDKFNKNDSVFIFMLSTRAGGVGINLTA-ANTVILHD 259 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++ ++ R + G R V V L+++ TI+E +L + K ++ + + Sbjct: 260 IDFNP-----YNDKQAEDRCHRVGQTREVSVIRLVSKQTIEEGMLSCAKYKLKLEKQMTS 314 Query: 197 ALKKE 201 + E Sbjct: 315 GISGE 319 >gi|42562605|ref|NP_175265.3| CHR18; ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|332194152|gb|AEE32273.1| chromatin remodeling factor18 [Arabidopsis thaliana] Length = 673 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTI 101 KI A+ +E +V H S L L + + Sbjct: 468 AKIPAVLDYLENVIEAGCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQALV 527 Query: 102 QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +I + G G+ L + ++F L W + R + G Sbjct: 528 SDFQDKDEIKAAVLSIRAAGVGITLTA-ASTVIFAELSWTPGDLI-----QAEDRAHRIG 581 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +V ++YL+A +T+D+++ +++K +L+ Sbjct: 582 QVSSVNIHYLLANDTVDDIIWDVVQSKLDNLGQMLDG 618 >gi|329121768|ref|ZP_08250385.1| SNF2 family helicase [Dialister micraerophilus DSM 19965] gi|327468238|gb|EGF13724.1| SNF2 family helicase [Dialister micraerophilus DSM 19965] Length = 888 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 58/180 (32%), Gaps = 24/180 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--------- 87 + + + K +++K ++V F L ++ Sbjct: 681 PEDMYLDLDLENMKSPKFDKGIELVQKLVNEGKKVLVWGIFVDTLYKITNTLREKGINVN 740 Query: 88 -FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G + I E+ G + +L ++P + G ++L + V+F ++L Q Sbjct: 741 LVYGGTNKLERTILIDEFRNGDVQVLVSNPQTLGESISLHQTVHDAVYFEYNFNLTFMLQ 800 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQ---------NTIDELVLQRLRTKSTIQDLLLNA 197 +RI + YYL IDE + RL+ K + ++ Sbjct: 801 SRDRIHRLG---LDQNQYTRYYYLQTASENFDSFRPGYIDENIYIRLKRKEKLMYEAIDD 857 >gi|307170865|gb|EFN62976.1| Transcription termination factor 2 [Camponotus floridanus] Length = 966 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 8/110 (7%) Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +N K +L G GGN L+ F + W+ + Q +RI Sbjct: 848 KDRQNVVNSFNSQKSGPRILLLSLT-AGGVGLNLVGGNHLLLFDIHWNPQLETQAQDRI- 905 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + G K+ V++Y I +TI+E V K I +L+ + +T Sbjct: 906 ----YRFGQKKNVYIYKFICVDTIEERVKALQEQKLEIARNVLSGDRNDT 951 Score = 35.9 bits (81), Expect = 3.4, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 11/43 (25%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 +++ ++ Q+ +V I E Sbjct: 702 DVKTHEILVLLLRLRQMCCHPALIHAMLDQDDVKHSGIMNAEN 744 >gi|168205333|ref|ZP_02631338.1| putative helicase with SNF2 domain [Clostridium perfringens E str. JGS1987] gi|170663173|gb|EDT15856.1| putative helicase with SNF2 domain [Clostridium perfringens E str. JGS1987] Length = 1015 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 12/162 (7%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAY-----HFNSDLARLQKAFPQGRTLDKDPCTIQE 103 KE I E ++ + I Y F + + + I++ Sbjct: 843 KEKVKSTISLAENLLLENEKVVIFTNYTEPAEKFKNHFKNKAVLINGDVPIKERQKIIED 902 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G+ + + + G+ L NI++F + H Q ERI + G + Sbjct: 903 FQNGESKVFIGNLKAASVGITLTK-ANIVIFNDFDYVPATHIQAEERI-----HRIGQDK 956 Query: 164 AVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLLNALKKETIH 204 ++Y A+N IDE + + L K + +++ E I Sbjct: 957 ECNIFYNYAENIEIDEWIAEMLEKKFNMISKIVDNRDSEFIE 998 >gi|167535991|ref|XP_001749668.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771816|gb|EDQ85477.1| predicted protein [Monosiga brevicollis MX1] Length = 1317 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 46/139 (33%), Gaps = 17/139 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEW 104 + L+ I + A ++V F++ L + + + + Sbjct: 1092 LMTLDAIWAREPLAKVLVFSQFSNTLTMVGERLKRRHLKFATLVGSMERTQRTNALAGFA 1151 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G+NL N +V + Q + R + G R Sbjct: 1152 KDPSTNVFLLSTRAGAVGINLTE-ANHVVLMDPCVNPATEQ-----QAIGRVHRLGQTRP 1205 Query: 165 VFVYYLIAQNTIDELVLQR 183 V V+ L+ +++ID + + Sbjct: 1206 VHVHRLLMRHSIDTRIARL 1224 >gi|312198809|ref|YP_004018870.1| SNF2-related protein [Frankia sp. EuI1c] gi|311230145|gb|ADP83000.1| SNF2-related protein [Frankia sp. EuI1c] Length = 769 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 48/157 (30%), Gaps = 20/157 (12%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL-------------DK 96 H K+ L I + N ++V F L + + ++ Sbjct: 577 HSAKLDRLVDIAREAGQNGQRVVVFSFFLEVLDIVGRRLRADPECGAVFGPITGAVAAEE 636 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ P + G ++++ E + R Sbjct: 637 RQQLVDDFGRRPAPAVLLSQIVAGGTGLNMQAASVVILCEPQVKPTL-----EEQAIARL 691 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G R V V+ L+ +++D+ +++ L K D Sbjct: 692 HRMGQIRTVQVHRLLTTDSVDQRLVEILAAKRVEFDA 728 >gi|161528234|ref|YP_001582060.1| SNF2-related protein [Nitrosopumilus maritimus SCM1] gi|160339535|gb|ABX12622.1| SNF2-related protein [Nitrosopumilus maritimus SCM1] Length = 574 Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 6/142 (4%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I +E + +I S + G++ I ++ +G+ L+ A Sbjct: 414 IMEIEESVVVFCHHKVIHKLLHESLQEFSPVSIIGGQSDTLRQDQIDKFQKGESKLMIAG 473 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G+NL ++F L W I R R + G + VF YYLI T Sbjct: 474 IRAGNVGINLTR-AKYVIFAELDWSPA-----IHRQAEDRLHRIGQQNTVFAYYLIGNGT 527 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 +D+ V L KS D +++ Sbjct: 528 LDDHVANVLVDKSYEIDEIMDE 549 >gi|312110246|ref|YP_003988562.1| SNF2-related protein [Geobacillus sp. Y4.1MC1] gi|311215347|gb|ADP73951.1| SNF2-related protein [Geobacillus sp. Y4.1MC1] Length = 555 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A + F F G K + + + A + G Sbjct: 371 IIFTEYRATQLYLQWFLKQHGISSVPFRGGFKHGKKDWMKELFKN-HAQVFIAT-EAGGE 428 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ ++ + L W+ +Q I R+ + G V++Y +NT++E +L Sbjct: 429 GINLQF-CRHVINYDLPWNPMRLEQRIGRV-----HRLGQTSDVYIYNFAVKNTVEEHIL 482 Query: 182 QRLRTKSTIQDLLLNAL 198 L K + + ++ L Sbjct: 483 TLLYEKIRLFERVVGQL 499 >gi|328858862|gb|EGG07973.1| hypothetical protein MELLADRAFT_85301 [Melampsora larici-populina 98AG31] Length = 150 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 14/115 (12%), Positives = 48/115 (41%), Gaps = 7/115 (6%) Query: 82 ARLQKAFPQGRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + G T + + + ++ + G GL++ + + W+ Sbjct: 8 HIQTCSLHGGMTNTQRTFQLKKFNQDPEVDAFVVSIEAGGVGLDMT-CADEVYIMDAHWN 66 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + QQ ++R+ ++ G V V++++ Q+++++ + + K+++ ++ Sbjct: 67 PQIVQQAVDRV-----QRMGQTHPVNVFHVVVQDSVEQHLFNVQKKKASLASKVI 116 >gi|229828149|ref|ZP_04454218.1| hypothetical protein GCWU000342_00206 [Shuttleworthia satelles DSM 14600] gi|229792743|gb|EEP28857.1| hypothetical protein GCWU000342_00206 [Shuttleworthia satelles DSM 14600] Length = 758 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 22/168 (13%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQ 102 K L I ++V F L+++QK + I Sbjct: 556 SAKGIRLLEICRAAAEEGRKVLVFSFFLDTLSKVQKLLGDQCLPLITGSVNAETRQNIID 615 Query: 103 EWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + +L + G GLN+Q ++++F + + R + G Sbjct: 616 RFRDARPGSVLACQIQAGGTGLNIQA-ASVIIFCEPQIKPSLQE-----QAIGRAYRMGQ 669 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQD-----LLLNALKKETIH 204 R V V +L+ + T+DE + L K I + ++ + H Sbjct: 670 VRNVLVRHLLCEGTVDERIRDLLERKRDIFENYADSSVMGEENRRGDH 717 >gi|300791026|ref|YP_003771317.1| DNA/RNA helicase [Amycolatopsis mediterranei U32] gi|299800540|gb|ADJ50915.1| DNA/RNA helicase [Amycolatopsis mediterranei U32] Length = 608 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 12/152 (7%) Query: 55 KIKALEVIIEKA--NAAPIIVAYHFNS-------DLARLQKAFPQGRTLDKDPCTIQEWN 105 K + + I+++ +V F L + A G T D++ + Sbjct: 423 KYQEVLAIVKENSAQGRKTLVWASFVRSISTLETLLGDFRPAVVHGGTADREEQIDFFRS 482 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +L ++PA+ G G++L + V+ + Q ++RI Sbjct: 483 DPDCLVLISNPATLGEGISLHQVCHDAVYVDRDFQAGRFLQSLDRIHRLG---LAPDTET 539 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V L ++T+DE+V RL K LL+ Sbjct: 540 RVTVLATRHTVDEVVAMRLNEKLEFMGKLLDD 571 >gi|56759244|gb|AAW27762.1| SJCHGC05261 protein [Schistosoma japonicum] Length = 141 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + A G GLNL G + ++F W+ + + + R + G R V VY LI Sbjct: 1 MLLTTAVGGLGLNLT-GADTVIFVEHDWNPSK-----DLQAMDRAHRIGQLRTVNVYRLI 54 Query: 172 AQNTIDELVLQRLRTKSTIQDLLL 195 +N+++E ++ K + +L Sbjct: 55 TENSVEEQIMNLQAFKLYLATTVL 78 >gi|167757932|ref|ZP_02430059.1| hypothetical protein CLOSCI_00267 [Clostridium scindens ATCC 35704] gi|167664364|gb|EDS08494.1| hypothetical protein CLOSCI_00267 [Clostridium scindens ATCC 35704] Length = 470 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 16/171 (9%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--- 86 + + +G+ + E + + +IK L I+ + I+ + S++ ++ + Sbjct: 269 KRLIFNKSGSHFDAVEMFHDPMDNPRIKMLMNILAEE---KTIIFCRYESEIEQICRIIP 325 Query: 87 ---AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F K ++ + G L A+ G LNLQ+ + +++ S WDL + Sbjct: 326 GAVRFDGKVPQRKRDIALRRF-AGDSDYLIANRNCAGFSLNLQF-CHNIIYMSNDWDLGK 383 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q +R+ + G V++ + A+NTIDE +L+ L K I + + Sbjct: 384 RMQSEDRV-----HRLGQGHDVYITDICAENTIDEQILKCLSRKENILECI 429 >gi|229143655|ref|ZP_04272078.1| hypothetical protein bcere0012_8220 [Bacillus cereus BDRD-ST24] gi|228639834|gb|EEK96241.1| hypothetical protein bcere0012_8220 [Bacillus cereus BDRD-ST24] Length = 642 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 33/244 (13%), Positives = 76/244 (31%), Gaps = 53/244 (21%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY--DEEKHWKEVHDEKIKA 58 Y +++ DL ++ + +K ++ +Q A+ ++ + Sbjct: 371 IYETLEQKTIKDLVDNDVGLVDEFKKAKIIRLMQAASNPYLLLKPIQEGISGIDYSPKTF 430 Query: 59 LEVIIEK-------------------------ANAAPIIVAYHFNSDLARL--------- 84 E +I +IV + + R Sbjct: 431 DEELINTLINYERTNSVPPKFDAALKLIQDLIRRDEKVIVWAIYIDTVERFSDYLLENGI 490 Query: 85 QKAFPQGRTLDK----------DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNIL 132 + G+T + I+E++ + ++ A+P + ++L + Sbjct: 491 ECKILYGKTKVESEGLDEAVETREKIIREFHSDESEFKVIIANPFAVAESISLHKACHNA 550 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 ++ +D + Q +RI YYLI +N+IDE++ RL K + Sbjct: 551 IYLERNFDGARYVQSKDRIHRYGLGMNTITN---YYYLITENSIDEVIDDRLIEKENLMI 607 Query: 193 LLLN 196 + Sbjct: 608 RVTE 611 >gi|222476088|ref|YP_002564609.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222454459|gb|ACM58723.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 969 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 60/145 (41%), Gaps = 18/145 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK------------AFPQGRTLDKDPCTIQEW 104 + ++ ++E+ I++ + L + G + E+ Sbjct: 471 RYIQQLLEEQPNEKILLFTEYRDTLDYILDLVKDEPWADEILVIHGGVDKEDRTRIEDEF 530 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G+ LLFA + G++LQ+ +I+V + L W+ +Q I R+ + G ++ Sbjct: 531 NHGQSRLLFAT-DAASEGIDLQHSCHIMVNYELPWNPNRLEQRIGRL-----HRYGQEKE 584 Query: 165 VFVYYLIAQNTIDELVLQRLRTKST 189 V V+ ++T + V + L+ K Sbjct: 585 VTVWNFSFEDTRESKVFEMLQDKVE 609 >gi|225678359|gb|EEH16643.1| XNP-1 [Paracoccidioides brasiliensis Pb03] Length = 1657 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 47/118 (39%), Gaps = 7/118 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + + + +N G + + G GLN+ G N ++ F ++ Sbjct: 1281 RTYSRLDGKTPIATRQISTKNFNSGSYTQVYLISTRAGGLGLNI-PGANRVIIFDFQFNP 1339 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E V R + G ++ VFVY +A T ++++ + K+ + +++ + Sbjct: 1340 T-----WEEQAVGRAYRLGQRKPVFVYRFLAGGTFEDIMHNKAVFKTQLSYRVVDKMN 1392 >gi|226290585|gb|EEH46069.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1761 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 47/118 (39%), Gaps = 7/118 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + + + +N G + + G GLN+ G N ++ F ++ Sbjct: 1381 RTYSRLDGKTPIATRQISTKNFNSGSYTQVYLISTRAGGLGLNI-PGANRVIIFDFQFNP 1439 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 E V R + G ++ VFVY +A T ++++ + K+ + +++ + Sbjct: 1440 T-----WEEQAVGRAYRLGQRKPVFVYRFLAGGTFEDIMHNKAVFKTQLSYRVVDKMN 1492 >gi|323455652|gb|EGB11520.1| hypothetical protein AURANDRAFT_17567 [Aureococcus anophagefferens] Length = 100 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 6/94 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L G GLNL N + WW+ +E + R + G R V L Sbjct: 1 VLLVSLKCGGTGLNLTR-ANHVFLLDTWWNAA-----VEEQAMDRVHRLGQTRPVTAVRL 54 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +A T++ +L + K+ + L L + + Sbjct: 55 VADKTVESRILDIQQAKTLVSAGALARLSADEVR 88 >gi|242762396|ref|XP_002340369.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Talaromyces stipitatus ATCC 10500] gi|218723565|gb|EED22982.1| nucleosome remodeling complex ATPase subunit (Snf2h), putative [Talaromyces stipitatus ATCC 10500] Length = 534 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/179 (11%), Positives = 59/179 (32%), Gaps = 30/179 (16%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKA---NAAP 70 + + + ++ +++ + + + + K L+ ++E+ + Sbjct: 362 SVTNILMDLRKICIHSLFVEGFEEIDDDTDIDVANLMLGSSKFILLKRLLEQEVTKDRKK 421 Query: 71 IIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 I++ F+ L + + + + NE + + + Sbjct: 422 ILIFSGFDYALNCCEALLAAMGISCLRLDGNTCYSLRRYNIHRFRNESECKVFIMATRAG 481 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G+ L ++VF + W+ + R + G + V +Y L T++E Sbjct: 482 GEGITLTA-AEVVVFLDMDWNPQVT-----AQAEARAYRLGQTKPVTIYKLCTSGTVEE 534 >gi|317158963|ref|XP_001827440.2| DNA repair helicase rad5,16 [Aspergillus oryzae RIB40] Length = 1113 Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 60/163 (36%), Gaps = 21/163 (12%) Query: 50 EVHDEKIKALEVI----IEKANAAPIIVAYHFNSDLARLQKAFPQGR-----------TL 94 E+ K+ ++ I I++ I++ F L + + + Sbjct: 923 EMTSAKLVKIQEIVKGWIDENPDVKIVIFTQFLDFLRLVGLMCNKEKWVATSLHGKLSLQ 982 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + +E ++ +L A + G GL++ N + LWW+ Q Sbjct: 983 AREQSMDKFRDEKEVRILIASLKAGGIGLDM-SMANKCILVDLWWNEAIQQ-----QAFC 1036 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V +I +++IDE +L+ K+ + Sbjct: 1037 RLYRIGQSKDVEFVKIIIKDSIDEYLLKMQTRKTANISGTMGD 1079 >gi|157692957|ref|YP_001487419.1| SNF2 family helicase [Bacillus pumilus SAFR-032] gi|157681715|gb|ABV62859.1| possible SNF2 family helicase protein [Bacillus pumilus SAFR-032] Length = 556 Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A I F F G K + E + +L A + G Sbjct: 373 IIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFRE-RAQVLIAT-EAGGE 430 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ N ++ + L W+ +Q I RI + G +R V +Y + T++E +L Sbjct: 431 GINLQF-CNQIINYDLPWNPMRLEQRIGRI-----HRLGQERDVHIYNMATNGTVEEHIL 484 Query: 182 QRLRTKSTIQDLLLNAL 198 + L K + + ++ L Sbjct: 485 KLLYEKIQLFENVIGDL 501 >gi|323487866|ref|ZP_08093124.1| SNF2 family DNA/RNA helicase [Planococcus donghaensis MPA1U2] gi|323398600|gb|EGA91388.1| SNF2 family DNA/RNA helicase [Planococcus donghaensis MPA1U2] Length = 851 Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 12/129 (9%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L ++ I + +I +L +P + ++L + ++ ++ Sbjct: 712 LGIKAAVIYGSTPQEERDAIIGMFKNNEIEVLITNPHTLAESVSLHKTCHDAIYLEYSFN 771 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN------TIDELVLQRLRTKSTIQDLL 194 L Q +RI + YY + + TIDE + RL+ K + + Sbjct: 772 LTHMLQSRDRIHRLG---LPSNQYTQYYYFMLEGQEEKRNTIDEKIYIRLKEKE---ERM 825 Query: 195 LNALKKETI 203 L A++ + + Sbjct: 826 LEAIEGDVL 834 >gi|326478247|gb|EGE02257.1| SNF2 family helicase [Trichophyton equinum CBS 127.97] Length = 979 Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 54/147 (36%), Gaps = 16/147 (10%) Query: 61 VIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDK-DPCTIQEWNEGKIP 110 ++++ I + F + + G+ + I+ + E + Sbjct: 760 KWLKESPNIKITIFTQFLGMIGAISSICEAEGWRYITLCGKLHHRTRHANIKRFREENVS 819 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + + G GLNL + + LWW+ + IE+ R + G K V + + Sbjct: 820 ILISSLKAGGVGLNLT-MASKCILVDLWWN-----EAIEQQAFCRLFRIGQKNDVEIVRI 873 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 +NT+D+ + KS + + Sbjct: 874 CVENTVDDRLQLIQSRKSEHIRKAMGS 900 >gi|116492331|ref|YP_804066.1| SNF2 family DNA/RNA helicase [Pediococcus pentosaceus ATCC 25745] gi|116102481|gb|ABJ67624.1| Superfamily II DNA/RNA helicase, SNF2 family [Pediococcus pentosaceus ATCC 25745] Length = 860 Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 9/122 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L G + + I+++ G +L +P + ++L + ++ ++ Sbjct: 718 LGHKVAVIYGGTPVGEREKIIKDFQCGLYDVLVTNPHTLAESVSLHMIAHDALYLEYSFN 777 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN------TIDELVLQRLRTKSTIQDLL 194 L Q RI ++ + YY + + TID + RL K I Sbjct: 778 LTHMLQSRNRIHRLGLKKGDYTS---YYYFMLEGQQNRRNTIDWKIYNRLNEKRDIMVDT 834 Query: 195 LN 196 + Sbjct: 835 IE 836 >gi|119386548|ref|YP_917603.1| helicase domain-containing protein [Paracoccus denitrificans PD1222] gi|119377143|gb|ABL71907.1| helicase domain protein [Paracoccus denitrificans PD1222] Length = 636 Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 71/229 (31%), Gaps = 37/229 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYDEEKHWKEV----------- 51 ++F R + +A ++ ++ LQL+ +V Sbjct: 364 NEFLRNYSKQISRGMGDAQFLKARRSVMRLLQLSVNPTLALSAMANDDVKVDSAIVDQLL 423 Query: 52 ---HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQ---------------KAFPQG 91 H K++A+ + ++ F + + Sbjct: 424 DEGHSAKMRAVMDHAYALARDGKKCVIWTIFTDTIHSFVSALADLNPVYIHGGVPSGLPS 483 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ + + +L A+PA+ G G++L + ++ + + Q I+RI Sbjct: 484 DPETREGRIRRFHEDPGCFVLVANPAAAGEGISLHTVCHNAIYADRSYVSTHYLQSIDRI 543 Query: 152 GVTRQRQAGFKRAVFVYYLIAQ---NTIDELVLQRLRTKSTIQDLLLNA 197 + + +Y A +ID V +RL K LL+ Sbjct: 544 HRLGLA-PDEETHIHIYRSKAPPVIGSIDMSVSRRLVEKIRNMQQLLDD 591 >gi|94263334|ref|ZP_01287149.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] gi|93456289|gb|EAT06419.1| SNF2-related:Helicase-like [delta proteobacterium MLMS-1] Length = 952 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 58/174 (33%), Gaps = 24/174 (13%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + + N +EK+ ++ + + + L + Sbjct: 774 RLRAMIN-------VMDELFAKNEKLLVFVEFLDLQESLIPYLQQRY--LLPKPPLRISG 824 Query: 91 GRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + K + + + + ++ P + G GL L N ++ + WW+ Q Sbjct: 825 KVSGAKRKSLVDSFQQSRSNLFDVMLLSPKAGGVGLTLTA-ANNVIHLTRWWNPAVEDQC 883 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLLL 195 +R+ + G + V VY +A +++ D+ + L K + +L Sbjct: 884 TDRV-----YRIGQNKPVNVYLPLAIHPRFNEHSFDQNLHLLLERKRKLSRSVL 932 >gi|195576640|ref|XP_002078183.1| GD23310 [Drosophila simulans] gi|194190192|gb|EDX03768.1| GD23310 [Drosophila simulans] Length = 755 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 8/187 (4%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 +E E A AS+ + A + + + II + Sbjct: 487 KETLDAFNKELKTAKGRASEEILLRFYAR-TAEVKTRAVCAYLKTIVKEQKKFIIFAHHR 545 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQY 127 + F S L D ++ + + + +C G+ L Sbjct: 546 VMMDAISDFLSGLKVHYIRIDGQTRSDLRSDSVDTFQKKSSCKVALLSLKACNSGITLTA 605 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 I+VF L W+ +R + G + V YL+A NT D+++ L+ K Sbjct: 606 -AEIIVFAELDWNPSTL-----AQAESRAHRIGQTKPVICRYLMAHNTADDIIWNMLKNK 659 Query: 188 STIQDLL 194 + + Sbjct: 660 QEVLSKV 666 >gi|4056415|gb|AAC97989.1| Similar to the end of DNA repair protein gb|X74615 (rad8) gene [Arabidopsis thaliana] Length = 95 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 6/79 (7%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G LNL + + WW+ +ER R + G + + V I +NT++E Sbjct: 4 GGVALNLT-VASHVFMMDPWWNPA-----VERQAQDRIHRIGQYKPIRVVRFIIENTVEE 57 Query: 179 LVLQRLRTKSTIQDLLLNA 197 +L+ + K + + + Sbjct: 58 RILRLQKKKELVFEGTVGG 76 >gi|302206285|gb|ADL10627.1| Putative SNF2 family DNA/RNA helicase [Corynebacterium pseudotuberculosis C231] Length = 920 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 16/150 (10%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQE 103 K++ + + ++ + I++ +F L RL F Q K + Sbjct: 723 AKVERIIELADEAASEGRNILIFSYFRDVLDRLHLEFDQRSVGIINGDVAPIKRQELVDT 782 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +L A + G GLN+Q ++++ E + R + G + Sbjct: 783 LGANGQDILLAQIGAGGVGLNIQK-ASVVILTEAQVKPAL-----EDQAIARAHRMGQTK 836 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 V VY ++ TIDE +L+ K + D Sbjct: 837 PVSVYRILGDETIDERLLEINAQKRKLFDE 866 >gi|300858572|ref|YP_003783555.1| hypothetical protein cpfrc_01155 [Corynebacterium pseudotuberculosis FRC41] gi|300686026|gb|ADK28948.1| hypothetical protein cpfrc_01155 [Corynebacterium pseudotuberculosis FRC41] gi|302330842|gb|ADL21036.1| Putative SNF2 family DNA/RNA helicase [Corynebacterium pseudotuberculosis 1002] gi|308276527|gb|ADO26426.1| Putative SNF2 family DNA/RNA helicase [Corynebacterium pseudotuberculosis I19] Length = 920 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 16/150 (10%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRT--------LDKDPCTIQE 103 K++ + + ++ + I++ +F L RL F Q K + Sbjct: 723 AKVERIIELADEAASEGRNILIFSYFRDVLDRLHLEFDQRSVGIINGDVAPIKRQELVDT 782 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +L A + G GLN+Q ++++ E + R + G + Sbjct: 783 LGANGQDILLAQIGAGGVGLNIQK-ASVVILTEAQVKPAL-----EDQAIARAHRMGQTK 836 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 V VY ++ TIDE +L+ K + D Sbjct: 837 PVSVYRILGDETIDERLLEINAQKRKLFDE 866 >gi|46255694|gb|AAH05038.1| CHD1L protein [Homo sapiens] Length = 789 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 72/200 (36%), Gaps = 34/200 (17%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +++Y ++E SAS+ K LQ K K + Sbjct: 220 IQRYQDIEKE------------SESASELHKLLQ----PFLLRRVKAEVATELPKKTEVV 263 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPA-- 117 + + + ++ + L ++ ++ N ++ HP Sbjct: 264 I----YHGMSALQKKYYKAIL-----MKDLDAFENETAKKVKLQNILSQLRKCVDHPYLF 314 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G G+NL + ++F ++ + + R + G ++V V LI ++T++ Sbjct: 315 DGGVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQNKSVKVIRLIGRDTVE 368 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 E+V ++ +K + ++++ Sbjct: 369 EIVYRKAASKLQLTNMIIEG 388 >gi|297849318|ref|XP_002892540.1| hypothetical protein ARALYDRAFT_888252 [Arabidopsis lyrata subsp. lyrata] gi|297338382|gb|EFH68799.1| hypothetical protein ARALYDRAFT_888252 [Arabidopsis lyrata subsp. lyrata] Length = 598 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 49/142 (34%), Gaps = 14/142 (9%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIPLL 112 ++ +A ++ + S L +++ + D + +G+ +L Sbjct: 442 WMLGTDESAKAVIFSRYKSFLELIERQLTKSGLRCVKLSESADGKAALQRFKEDGQCKIL 501 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G L+L + + W+ + +R + R + + + I+ Sbjct: 502 LTTFEIVGDLLDL-SVASHVFLMDPGWNP-----ITDRQALARVQTVRQSKPTRMVKFIS 555 Query: 173 QNTIDELVLQRLRTKSTIQDLL 194 + TI+E ++ L+ K + Sbjct: 556 KGTIEEKIIDVLQEKQNTLAGV 577 >gi|222624248|gb|EEE58380.1| hypothetical protein OsJ_09537 [Oryza sativa Japonica Group] Length = 1474 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 22/156 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLAR---------------LQKAFPQGRTLDKD 97 K + + +A ++V + L G T D+ Sbjct: 1269 KAKFVHNLLSLSEATGGKVLVFSQYVRSLIFLEKLVSRMKGWKSEVHIFRVTGGSTQDQR 1328 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + F +CG G++L G + +V + + + R + R Sbjct: 1329 EQAVHRFNNSPDARVFFGSIKACGEGISL-VGASRIVILDVHENPS-----VMRQAIGRA 1382 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + V+ Y L+A ++ +E K + Sbjct: 1383 YRPGQSKMVYCYRLVAADSPEEDDHHTAFKKERVSK 1418 >gi|302834136|ref|XP_002948631.1| hypothetical protein VOLCADRAFT_58399 [Volvox carteri f. nagariensis] gi|300266318|gb|EFJ50506.1| hypothetical protein VOLCADRAFT_58399 [Volvox carteri f. nagariensis] Length = 584 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 6/82 (7%) Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G+NL N +V LWW+ +Q I+R + G R V V + Sbjct: 482 VSLKAAALGVNLT-VANHVVLMDLWWNPTTEEQAIDR-----AHRIGQTRTVHVTRITIA 535 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 ++++ +L+ + K + L Sbjct: 536 GSVEDRILELQQVKRELVAAAL 557 >gi|308811198|ref|XP_003082907.1| SNF2 domain-containing protein / helicase domain-containing protein (ISS) [Ostreococcus tauri] gi|116054785|emb|CAL56862.1| SNF2 domain-containing protein / helicase domain-containing protein (ISS) [Ostreococcus tauri] Length = 596 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 7/144 (4%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 I + + F + ++ + + + G Sbjct: 382 IFFAHHGVMLDAVSAFLEKKKCKHIRIDGSTPSAARGDLVNKFQRDDSTRIAVLSIKAAG 441 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GL L + ++F + W + R + G +V V YL A++TIDE++ Sbjct: 442 MGLTLTA-ASTVIFGEMVWTPGDLI-----QAEDRAHRIGQASSVLVQYLHARDTIDEII 495 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 Q +R K +LN + + Sbjct: 496 WQTIRRKLDTLGTVLNGQSGDHLE 519 >gi|315048351|ref|XP_003173550.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum CBS 118893] gi|311341517|gb|EFR00720.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum CBS 118893] Length = 1808 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 46/139 (33%), Gaps = 16/139 (11%) Query: 68 AAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +++ + L + + + +++ + Sbjct: 1332 GDKVLIFSGYLHTLTYLGSMLEARGQKFCRLDGKTPIATRQTATKNFSDSDAHVYLISTK 1391 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLN+ G N ++ F ++ E + R + G + VFVY + T + Sbjct: 1392 AGALGLNI-IGANRVIIFESEYNPT-----WEEQAIGRAYRLGQAKDVFVYRFVMGGTFE 1445 Query: 178 ELVLQRLRTKSTIQDLLLN 196 EL+ ++ K + ++ Sbjct: 1446 ELIHEKGVFKKNMALRAVD 1464 >gi|242819355|ref|XP_002487301.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218713766|gb|EED13190.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1114 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 51/155 (32%), Gaps = 18/155 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTL------------DKDPCTIQEWNEGKIP 110 ++ ++ + S L ++ A + + I Sbjct: 953 LKDEPPIKSVIFSGWTSHLDLIEIALKDHGLNGFTRIDGTMSLAARKAALNSFAEDKDIT 1012 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + G GLNL + + ++ Q ++R+ + G R V Sbjct: 1013 ILLATIGAGGVGLNLTS-ASRVYIMEPQYNPAAVAQAVDRV-----HRLGQTREVTTVQF 1066 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I + +I+E + + + K + + + K + V Sbjct: 1067 IMKASIEEKIFEMAKKKQQLAEDSMARGKLDKREV 1101 >gi|91089449|ref|XP_967843.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] gi|270011408|gb|EFA07856.1| hypothetical protein TcasGA2_TC005426 [Tribolium castaneum] Length = 661 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 50/141 (35%), Gaps = 8/141 (5%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC--TIQEWNEGKIPLLF 113 +K+ + + A+ ++ A D ++ G T + + + Sbjct: 460 LKSGQKFLVFAHHQIMLNAVCNVLDKKNVKYIRIDGSTTSEQRKFFVDKFQLNDDCLVAV 519 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G+ L +++F L W+ +R + G + V + YL+A Sbjct: 520 LSITAANAGITLTA-AQLVLFAELHWNPSILS-----QAESRAHRIGQQNPVIIKYLLAP 573 Query: 174 NTIDELVLQRLRTKSTIQDLL 194 T D+ + L+ K I + + Sbjct: 574 GTADDSIWPMLQNKQKILEEV 594 >gi|224139690|ref|XP_002323229.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222867859|gb|EEF04990.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 743 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 7/98 (7%) Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+E+ + +L A + G+NL + + WW+ + ++ + Sbjct: 631 QAEIIKEFGSARPGTVLLASLKTSVFGINLTA-ASKVYLLEPWWNSADEER-----AINC 684 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G K V + LIAQN+I+E +L+ K + Sbjct: 685 VHRYGQKENVRIVRLIAQNSIEERILEMQERKKLASEA 722 >gi|302758372|ref|XP_002962609.1| hypothetical protein SELMODRAFT_404507 [Selaginella moellendorffii] gi|300169470|gb|EFJ36072.1| hypothetical protein SELMODRAFT_404507 [Selaginella moellendorffii] Length = 760 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 6/121 (4%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 I V + L L+ A + + +I E+ + I ++ +GLNL Sbjct: 319 KIFVFSTWQEVLDLLEHALKSTSSAGQMGSSILEFKKENIQVMLLPIQHGANGLNL-IEA 377 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 ++ + +E + R + G + V+ I NT++E + + + K+ Sbjct: 378 QHVILVEPLLNPA-----VEAQAINRVHRIGQRLKTLVHRFIICNTVEENIYKMSQQKTN 432 Query: 190 I 190 + Sbjct: 433 L 433 >gi|239977351|sp|A4HVU6|JBP2_LEIIN RecName: Full=Bifunctional helicase and thymine dioxygenase JBP2; AltName: Full=J-binding protein 2; Includes: RecName: Full=Probable DNA helicase JBP2; Includes: RecName: Full=Thymine dioxygenase JBP2 Length = 1098 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +I + ++ + + + + + +L Sbjct: 912 LIIFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRAMQEFSENKDLIVLVLSTKIA 971 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GL+ N +V F WW+ + ++ + R + ++ V VY LI+ T ++ Sbjct: 972 AYGLDFTA-ANHVVLFDSWWNPQ-----VDAQAIARAYRRNQRKPVTVYRLISA-TENKF 1024 Query: 180 VLQRLRTKSTIQDLLLNA 197 VL+ K + +L+ Sbjct: 1025 VLRSQTRKIALFKCILHE 1042 >gi|295399151|ref|ZP_06809133.1| SNF2-related protein [Geobacillus thermoglucosidasius C56-YS93] gi|294978617|gb|EFG54213.1| SNF2-related protein [Geobacillus thermoglucosidasius C56-YS93] Length = 555 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A + F F G K + + + A + G Sbjct: 371 IIFTEYRATQLYLQWFLKQHGISSVPFRGGFKRGKKDWMKELFKN-HAQVFIAT-EAGGE 428 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ ++ + L W+ +Q I R+ + G V++Y +NT++E +L Sbjct: 429 GINLQF-CRHVINYDLPWNPMRLEQRIGRV-----HRLGQTSDVYIYNFAVKNTVEEHIL 482 Query: 182 QRLRTKSTIQDLLLNAL 198 L K + + ++ L Sbjct: 483 TLLYEKIRLFERVVGQL 499 >gi|311110806|ref|ZP_07712203.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri MV-22] gi|311065960|gb|EFQ46300.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri MV-22] Length = 761 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 18/157 (11%) Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDK 96 + + +KI+ + I N+ +IV F + + +L K + ++ Sbjct: 562 FIDEDSQKIEQIINICVDSHENSEKVIVFSFFKNYVLKLLKKKLPFLADDIISGDLSSNQ 621 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++ +L + G GLN+Q N ++ W E ++R Sbjct: 622 RQEVIDKFSENPNQNVLLVQIDAGGFGLNIQA-ANRVILCEPQWKPST-----ENQAISR 675 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G R V VY L+ + ++DE +++ + K I + Sbjct: 676 AYRMGQNRNVMVYRLLTKESVDETMMEIIHEKEDIFN 712 >gi|313901547|ref|ZP_07834991.1| SNF2-related protein [Thermaerobacter subterraneus DSM 13965] gi|313468186|gb|EFR63656.1| SNF2-related protein [Thermaerobacter subterraneus DSM 13965] Length = 524 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 36/226 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW------------- 48 + Y R + + + + ++ + + Sbjct: 247 ELYQAVLRAVREEYAERRLYNGTVLPLLMLQREVCSSSHALRATLDRLAGSEGWQSLAWA 306 Query: 49 ------KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD------- 95 ++V + + + + P++V F + L + + Sbjct: 307 RVRELARQVEENHKALMLERLVEKLDEPVVVFTEFRATQDYLARRLRRAGVETVIYHGAM 366 Query: 96 ---KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + +G +L G GLNLQ+ +V + L W+ +Q I R+ Sbjct: 367 GACERDAAKARFRKGA-RVLI-STECGGQGLNLQF-CRNVVNYDLPWNPMRVEQRIGRVH 423 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q V V+ L A+ TI+E +L+ L K + ++ + Sbjct: 424 RLGQ----EAETVRVFNLYARRTIEEYILRLLDEKINLFRQVIGEI 465 >gi|311899397|dbj|BAJ31805.1| hypothetical protein KSE_60370 [Kitasatospora setae KM-6054] Length = 776 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 62/162 (38%), Gaps = 27/162 (16%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ------------------GR 92 K++ L + + + ++V +F LA ++ A Sbjct: 582 SAKLRRLRELTAEAAESGHKVVVFSYFREVLAAVRDALGAAGGGDSGSGSTVVGTIAGSL 641 Query: 93 TLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ + E+ + +L + G GLNLQ N+++ E Sbjct: 642 PAEQRQELVDEFTAVQGHAVLLCQIQAGGLGLNLQA-ANVVILCEPQLKPTL-----EDQ 695 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 V R ++ G R V V+ L+A +++D +++ L+ K+ + D Sbjct: 696 AVARAQRMGQIRRVRVHRLLASDSLDHRLVELLKGKAELFDR 737 >gi|119192670|ref|XP_001246941.1| hypothetical protein CIMG_00712 [Coccidioides immitis RS] Length = 980 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 6/105 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ + + I +L + + G GL+L + LWW+ Q Sbjct: 845 PPSERHREIEEFRTDPSIRVLISSLKAGGTGLSLT-MAEKCILIDLWWNEAMEQ-----Q 898 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V + + +N+ID+ + KS+ + + Sbjct: 899 AFCRLFRYGQKKEVEIVRITVKNSIDDRIQLIQNAKSSNIEKTMG 943 >gi|297484680|ref|XP_002694499.1| PREDICTED: E1A binding protein p400 [Bos taurus] gi|296478660|gb|DAA20775.1| E1A binding protein p400 [Bos taurus] Length = 3095 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 62/165 (37%), Gaps = 19/165 (11%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 + ++ E + K++AL ++++K + +++ L L+ Sbjct: 1834 QLQRMTALHSLRFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFL 1893 Query: 89 PQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + ++ +N + +I S G++L + +VF+ Sbjct: 1894 NFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGVSL-VEADAVVFYDH 1952 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + +++ + G ++ V +Y L++ N+I+E +L+ Sbjct: 1953 DLNP-----VMDAKAQEWCDRIGRRKDVHIYRLVSGNSIEEKLLK 1992 >gi|194674605|ref|XP_878269.3| PREDICTED: E1A binding protein p400 isoform 5 [Bos taurus] Length = 2680 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 62/165 (37%), Gaps = 19/165 (11%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 + ++ E + K++AL ++++K + +++ L L+ Sbjct: 1419 QLQRMTALHSLRFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFL 1478 Query: 89 PQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + ++ +N + +I S G++L + +VF+ Sbjct: 1479 NFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGVSL-VEADAVVFYDH 1537 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + +++ + G ++ V +Y L++ N+I+E +L+ Sbjct: 1538 DLNP-----VMDAKAQEWCDRIGRRKDVHIYRLVSGNSIEEKLLK 1577 >gi|145356928|ref|XP_001422675.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582918|gb|ABP00992.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 638 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 66/222 (29%), Gaps = 35/222 (15%) Query: 5 HKFQRELYCDL-------------QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV 51 + ++++ DL + + S + Q + + + Sbjct: 366 RRLKKDVLKDLPPKQRTQVWLALEKSSMGDVRRIKSLLDELRQRGGNELEEKRLLNELFL 425 Query: 52 HDEK-----IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP----------QGRTLDK 96 K + + + + + H L + + Sbjct: 426 ASAKAKTKSVCEYLETLIDGSTSKFLFFAHHGVLLDAVAQCMDAKKVKTIRIDGSTPAAV 485 Query: 97 DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + + + G GL L + ++F + W + R Sbjct: 486 RGDLVNAFQRRDDVRVAILSIKAAGMGLTLTA-ASTVIFGEMVWTPGDLI-----QAEDR 539 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + +V V YL A++TIDE++ Q ++ K +LN Sbjct: 540 AHRIGQQSSVLVQYLHAKDTIDEIIWQSIKKKLDNLGAVLNG 581 >gi|282852065|ref|ZP_06261423.1| SNF2 family N-terminal domain protein [Lactobacillus gasseri 224-1] gi|282556825|gb|EFB62429.1| SNF2 family N-terminal domain protein [Lactobacillus gasseri 224-1] Length = 424 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 18/157 (11%) Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDK 96 + + +KI+ + I N+ +IV F + + +L K + ++ Sbjct: 225 FIDEDSQKIEQIINICVDSHENSEKVIVFSFFKNYVLKLLKKKLPFLADDIISGDLSSNQ 284 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++ +L + G GLN+Q N ++ W E ++R Sbjct: 285 RQEVIDKFSENPNQNVLLVQIDAGGFGLNIQA-ANRVILCEPQWKPST-----ENQAISR 338 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G R V VY L+ + ++DE +++ + K I + Sbjct: 339 AYRMGQNRNVMVYRLLTKESVDETMMEIIHEKEDIFN 375 >gi|194214436|ref|XP_001915685.1| PREDICTED: E1A binding protein p400 [Equus caballus] Length = 3092 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 64/193 (33%), Gaps = 25/193 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y R L+ + E + K++AL ++ Sbjct: 1812 LYSHRMRIFRHCLKEHTAPYAQQLQQMTALR------SLQFPELRLVQFDSGKLEALAIL 1865 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKI 109 ++K + +++ L L+ + ++ +N + +I Sbjct: 1866 LQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRI 1925 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G++L + +VF+ + +++ + G ++ V +Y Sbjct: 1926 FCAILSTHSRATGVSL-VEADAVVFYDNDLNP-----VMDAKAQEWCDRIGRRKDVHIYR 1979 Query: 170 LIAQNTIDELVLQ 182 L++ N+I+E +L+ Sbjct: 1980 LVSGNSIEEKLLK 1992 >gi|317419683|emb|CBN81720.1| Helicase SRCAP [Dicentrarchus labrax] Length = 429 Score = 65.9 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 61/199 (30%), Gaps = 38/199 (19%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK------------- 49 Y F + + + + ++ ++ N +D Sbjct: 237 LYDDFMAQASTRETLASGHFMSVINILMQLRKVCNHPNLFDPRPIQSPFITQPIVFHTAS 296 Query: 50 ------EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD------ 95 EV K++ L ++ K +++ L L++ + Sbjct: 297 LVQDALEVSPLKLQTLHTLLRKLKTGGHRVLIFTQMTRMLDVLEQFLNYHGHIYLRLDGS 356 Query: 96 ----KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ +N + +I S G G+NL G + +VF+ W+ ++ Sbjct: 357 TRVEQRQALMERFNADRRIFCFILSTRSGGVGVNLT-GADTVVFYDSDWNPT-----MDA 410 Query: 151 IGVTRQRQAGFKRAVFVYY 169 R + G R V +Y Sbjct: 411 QAQDRCHRIGQTRDVHIYR 429 >gi|261415452|ref|YP_003249135.1| helicase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371908|gb|ACX74653.1| helicase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 876 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 71/221 (32%), Gaps = 36/221 (16%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +RE E + + ++ +K ++ + EK K + +I + II Sbjct: 397 YGEDEREG---FDDEATISVQTLAEPLKLMENEIDHINLLLEKATKVTSETRINRIVEII 453 Query: 64 EK-ANAAPIIVAYHFNSDLARL--------------------------QKAFPQGRTLDK 96 ++ +++ + + + Sbjct: 454 KEKYPNDQVLLFTEYKRTQSLMMTELMKVWGDNSVTIINGDESLKDVVYPDGCSRDISIS 513 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +++N G++ + G G++LQ ++L+ L W+ Q + R+ Sbjct: 514 RNDACEKFNNGEVR-FLISTEAAGEGIDLQKNCHVLIHIDLPWNPMRLHQRVGRV----- 567 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G V V + + I+ + L K +L+ Sbjct: 568 HRLGQTHDVEVVSVRNPDNIESKIWGYLEEKIDQIQKMLSE 608 >gi|242212599|ref|XP_002472132.1| predicted protein [Postia placenta Mad-698-R] gi|220728776|gb|EED82663.1| predicted protein [Postia placenta Mad-698-R] Length = 468 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G G+NL +I+V + + + R + G + V Sbjct: 10 DSDKFIFLLTTRAGGLGINLTT-ADIVVLYDSD-----LISQADLQAMDRAHRIGQTKQV 63 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +V+ I + +++E +L+R K + L++ Sbjct: 64 YVFRFITEGSVEERMLERTAQKLRLDQLVMQ 94 >gi|326437103|gb|EGD82673.1| hypothetical protein PTSG_03334 [Salpingoeca sp. ATCC 50818] Length = 884 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 6/113 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R + + ++ + + + + G GL L ++VF L+W+ Sbjct: 572 RHVRIDGSTPSSLRNELATRFQTDETCRVALLSITAAGTGLTLHA-ATLVVFAELFWNPG 630 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G + AV V YLI +NT+DE + +++ K + + Sbjct: 631 QLL-----QAEDRAHRVGQQCAVDVKYLICRNTLDESMWEKVERKMAVVGRAV 678 >gi|330870418|gb|EGH05127.1| SNF2-related:helicase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 101 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 6/97 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + ++ G G NL N + F L W R + G R Sbjct: 1 QDPDCRVFIGTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRV 54 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V V +A++TID+ + Q L K + L++ +E Sbjct: 55 VVVKIPLAEDTIDQQLWQMLMDKRALASDLIDPDAEE 91 >gi|221091560|ref|XP_002158128.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 590 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 38/118 (32%), Gaps = 14/118 (11%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWW 139 ++ K + +N+ +S G L G N LV F W Sbjct: 390 RGYQYVRLDGSMSIKKRMKVVDRFNDPNSNDFLFMLSSKAGGCGLNLIGANRLVMFDPDW 449 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + + R + G K+ TI+E +LQR K + +++ Sbjct: 450 NPAN-----DDQAMARVWRDGQKKET--------GTIEEKILQRQTHKKALSSCVVDE 494 >gi|238853530|ref|ZP_04643903.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] gi|238833851|gb|EEQ26115.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] Length = 504 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 18/157 (11%) Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDK 96 + + +KI+ + I N+ +IV F + + + ++ Sbjct: 305 FIDEDSQKIEQIINICVDSHENSEKVIVFSFFKNYVLKLLNKKLPFLADDIISGDLSSNQ 364 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++ +L + G GLN+Q N ++ W E ++R Sbjct: 365 RQEVIDKFSENPNQNVLLVQIDAGGFGLNIQA-ANRVILCEPQWKPST-----ENQAISR 418 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G R V VY L+ + ++DE +++ + K I + Sbjct: 419 AYRMGQNRNVMVYRLLTKESVDETMMEIIHEKEDIFN 455 >gi|167629278|ref|YP_001679777.1| snf2 family helicase, putative [Heliobacterium modesticaldum Ice1] gi|167592018|gb|ABZ83766.1| snf2 family helicase, putative [Heliobacterium modesticaldum Ice1] Length = 581 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 19/157 (12%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTI 101 H K AL ++ N +IV F+ L + G + + Sbjct: 368 HRAKADALVQLLRGLND-KVIVFTGFSETHRYLVRRLTEAGFAVAQLHGGMKRLEKEEQV 426 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + +L + G NLQ+ LV + L W+ + +Q I RI + G Sbjct: 427 RYF-ADVAQVLL-STETGSEGRNLQF-CRCLVNYDLPWNPMQIEQRIGRI-----HRIGQ 478 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +R V++Y L AQ+T++ +L+ L K + L++ L Sbjct: 479 ERDVYIYNLSAQDTLEAHMLELLDAKINMFQLVVGEL 515 >gi|311269513|ref|XP_003132519.1| PREDICTED: helicase-like transcription factor-like [Sus scrofa] Length = 125 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 9/111 (8%) Query: 92 RTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K +IQ + G ++ + G GLNL + + W+ Q Sbjct: 1 MAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNL-SAASRVFLMDPAWNPAAEDQCF 59 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +R + G K+ V + I +++++E +L+ TK + K Sbjct: 60 DRC-----HRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKK 105 >gi|297812227|ref|XP_002873997.1| hypothetical protein ARALYDRAFT_351139 [Arabidopsis lyrata subsp. lyrata] gi|297319834|gb|EFH50256.1| hypothetical protein ARALYDRAFT_351139 [Arabidopsis lyrata subsp. lyrata] Length = 1260 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 8/160 (5%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 V + ++ V EKI I + F R L + Sbjct: 1064 VMFVLNLVYRVVKREKILIFCHNIAPIRMFTELFENVFRWQRGREILTLTGDLELFERGR 1123 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++ E +L A +C G++L + ++ W+ + + + R Sbjct: 1124 VIDKFEEPGNPSRVLLASITACAEGISLTA-ASRVIMLDSEWNPSKT-----KQAIARAF 1177 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V+VY L+++ T++E +R K + ++ + Sbjct: 1178 RPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFSE 1217 >gi|115387833|ref|XP_001211422.1| predicted protein [Aspergillus terreus NIH2624] gi|114195506|gb|EAU37206.1| predicted protein [Aspergillus terreus NIH2624] Length = 914 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 50/153 (32%), Gaps = 18/153 (11%) Query: 53 DEKIKALE-VIIEKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCT 100 KI L + + + I+ + L ++K + Sbjct: 763 SSKINMLVSDVQDSLDTTKSIIFSCWTRTLDLVEKHLRMADILFLRIDGKTPPQVRQERL 822 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + +L + G GLNLQ N + W+ +E + R + G Sbjct: 823 DKFNTTSTVAVLIMTTGTGGVGLNLQSV-NRVFIVEPQWNPS-----VETQAIARAIRLG 876 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 ++ V V Q +I+E + + K ++ + Sbjct: 877 QEQTVSVIRYYVQGSIEEDMCSQQTRKLSLSKM 909 >gi|212529810|ref|XP_002145062.1| helicase, putative [Penicillium marneffei ATCC 18224] gi|210074460|gb|EEA28547.1| helicase, putative [Penicillium marneffei ATCC 18224] Length = 987 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 51/165 (30%), Gaps = 20/165 (12%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTI 101 + + + + N I+ + L + K + + Sbjct: 806 SSKMTMLVSDVQKALNTTKSIIFSCWTRTLDLIGKHLSSANIEYARIDGKTPLSQRQKIL 865 Query: 102 QEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + IP+L + GLNL N + W+ +E + R + G Sbjct: 866 DSFDRTRNIPILIMTTGTGALGLNL-KSVNRVFIIEPQWNPA-----VESQAIARAIRLG 919 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V V + +I+E + ++ K I + +K+ + + Sbjct: 920 QTEQVLVIRYHVKGSIEENMCEQQTQKLKISKM---DFRKDFLTI 961 >gi|169608872|ref|XP_001797855.1| hypothetical protein SNOG_07521 [Phaeosphaeria nodorum SN15] gi|111063867|gb|EAT84987.1| hypothetical protein SNOG_07521 [Phaeosphaeria nodorum SN15] Length = 220 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 6/150 (4%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPL 111 +K I+ + +A H + K + + + + Sbjct: 31 KKKDALDVHIVFSFWKTTLDIAAHMFDTASLRYSRIHGQIPASKRSKILSSFESSNDVRI 90 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + GLN N + W+ Q I RI + G +++V + I Sbjct: 91 LLITLGTGAVGLNKLKVANHIHILEPQWNPSVESQAIGRI-----LRMGQEKSVRITRYI 145 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + T+++ V R K + +K E Sbjct: 146 MKGTVEKAVQSRQLRKLQLASGGFGFVKDE 175 >gi|66357602|ref|XP_625979.1| HARP like SWI/SNF ATpase [Cryptosporidium parvum Iowa II] gi|46227244|gb|EAK88194.1| HARP like SWI/SNF ATpase [Cryptosporidium parvum Iowa II] Length = 908 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 10/165 (6%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT 100 Y DE+ H + A+E ++ K F + + ++ Sbjct: 746 YNDEKYVIFGHHHVMLDAIESVLLKKRKTACNSGGPF-----LFIRIDGKTPGNKREEYV 800 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N + +CG GLNL G ++F L+W Q +R Sbjct: 801 KEFQNNENCKVALLSITACGQGLNLTSAGT-VIFAELYWVPGTMLQAEDRCHRI----GT 855 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + ++YLIA+ T+D+ + L K I L+ + + + Sbjct: 856 QYSCINIHYLIAEETLDDKMWGTLCRKQKIMASTLDGIDQRKNDI 900 >gi|146081173|ref|XP_001464187.1| j-binding protein [Leishmania infantum JPCM5] gi|134068278|emb|CAM66564.1| putative j-binding protein [Leishmania infantum JPCM5] Length = 1022 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +I + ++ + + + + + +L Sbjct: 836 LIIFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRAMQEFSENKDLIVLVLSTKIA 895 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GL+ N +V F WW+ + ++ + R + ++ V VY LI+ T ++ Sbjct: 896 AYGLDFTA-ANHVVLFDSWWNPQ-----VDAQAIARAYRRNQRKPVTVYRLISA-TENKF 948 Query: 180 VLQRLRTKSTIQDLLLNA 197 VL+ K + +L+ Sbjct: 949 VLRSQTRKIALFKCILHE 966 >gi|255954695|ref|XP_002568100.1| Pc21g10680 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589811|emb|CAP95965.1| Pc21g10680 [Penicillium chrysogenum Wisconsin 54-1255] Length = 943 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 63/177 (35%), Gaps = 22/177 (12%) Query: 27 SKTVKCLQLANGAVY-YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 +K L + V +E K V K L ++ + V S Sbjct: 738 AKITAVRGLVSDWVKEDEEVKIVIFVQFLKTVQLLQLMCEKEGWKYAVITGKVS------ 791 Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +D Q E I ++ + + G GLNL N + WW+ Sbjct: 792 -------PISRDKQIEQFSKEKDIKVMISSLRTGGVGLNLT-MANKCILMDPWWN----- 838 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL--NALKK 200 + I+ R + G R V ++A+ +ID +++ + K+ D L ALK+ Sbjct: 839 EAIQNQAYCRLYRIGQPRPVEYVQVVAKVSIDSWMMRLQKEKTRNIDRLFSKEALKE 895 >gi|322497591|emb|CBZ32664.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1022 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +I + ++ + + + + + +L Sbjct: 836 LIIFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRAMQEFSENKDLIVLVLSTKIA 895 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GL+ N +V F WW+ + ++ + R + ++ V VY LI+ T ++ Sbjct: 896 AYGLDFTA-ANHVVLFDSWWNPQ-----VDAQAIARAYRRNQRKPVTVYRLISA-TENKF 948 Query: 180 VLQRLRTKSTIQDLLLNA 197 VL+ K + +L+ Sbjct: 949 VLRSQTRKIALFKCILHE 966 >gi|124513598|ref|XP_001350155.1| DNA helicase, putative [Plasmodium falciparum 3D7] gi|23615572|emb|CAD52564.1| DNA helicase, putative [Plasmodium falciparum 3D7] Length = 1446 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 6/86 (6%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L + G GLNL + + LWW+ IE R + G + V +Y Sbjct: 1333 KVLLCSLKAGGVGLNLT-VSSKVYLMDLWWNPA-----IEDQAFERVHRIGQLKEVNIYK 1386 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 + + T++E +LQ ++K + +L Sbjct: 1387 FVLEKTVEERILQIHQSKQYTANQIL 1412 >gi|169611232|ref|XP_001799034.1| hypothetical protein SNOG_08724 [Phaeosphaeria nodorum SN15] gi|111062772|gb|EAT83892.1| hypothetical protein SNOG_08724 [Phaeosphaeria nodorum SN15] Length = 1369 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 50/151 (33%), Gaps = 17/151 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNE 106 + +++ II+ F + + L K +D + Sbjct: 1171 QILNWMKEDPKVKIIIYTQFLAMVKILGKICSHEGWEAEQYVGTMSFGARDKAINTFASN 1230 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 K +L A G GLNL + ++ WW+ Q R + G K F Sbjct: 1231 DKCNILLASLRCGGLGLNLT-MASRVIMVDPWWNEASEQ-----QAFCRVFRIGQKEETF 1284 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + L +NT+D +++ K+ ++ Sbjct: 1285 MSRLCVKNTVDSKLIEMQERKTKEIGEIMED 1315 >gi|239977350|sp|Q4QFY1|JBP2_LEIMA RecName: Full=Bifunctional helicase and thymine dioxygenase JBP2; AltName: Full=J-binding protein 2; Includes: RecName: Full=Probable DNA helicase JBP2; Includes: RecName: Full=Thymine dioxygenase JBP2 Length = 1098 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 46/130 (35%), Gaps = 7/130 (5%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 + ++ + + + + + +L +GL+ Sbjct: 920 GSQDLIHRTLTALRVCTFTVRGRDSQDRRRRAMQEFSENKDLIVLVLSTKIAAYGLDFTA 979 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 N +V F WW+ + ++ + R + ++ V VY LI+ T ++ VL+ K Sbjct: 980 -ANHVVLFDSWWNPQ-----VDAQAIARAYRRNQRKPVTVYRLISA-TENKFVLRSQTRK 1032 Query: 188 STIQDLLLNA 197 + +L+ Sbjct: 1033 IALFKCILHE 1042 >gi|226225594|ref|YP_002759700.1| helicase [Gemmatimonas aurantiaca T-27] gi|226088785|dbj|BAH37230.1| helicase [Gemmatimonas aurantiaca T-27] Length = 1150 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 62/229 (27%), Gaps = 39/229 (17%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----HDEKIKALE 60 + + DL G + + V ++ L Sbjct: 776 EEIMGRIRADL-GSTAGRRQPLAALQRLHLCTQHPVLAGAATGHDVDALIATSARLAQLL 834 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD--------------------KDP 98 ++ + + +++ L + Q + Sbjct: 835 KLLREIQVQSEKVLIFARSVDSQRLLARVIAQSLGTQVDIVNGQTGVTGGRATSGTVRRE 894 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + P G GL L N +V + WW+ IE R + Sbjct: 895 ILSRFRATPGFAAIVLSPFVAGVGLTLTE-ANHVVHYGRWWNPA-----IENQATDRAHR 948 Query: 159 AGFKRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V VYYL+ Q + DE + LR + + L+ + ++ Sbjct: 949 IGQTKPVHVYYLLGTYRAPEQRSFDEALDDLLRERRDLAHDFLSPVTED 997 >gi|116195246|ref|XP_001223435.1| hypothetical protein CHGG_04221 [Chaetomium globosum CBS 148.51] gi|88180134|gb|EAQ87602.1| hypothetical protein CHGG_04221 [Chaetomium globosum CBS 148.51] Length = 450 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 17/170 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR---LQKAFPQGRTLDKDP 98 D+ H K+ AL ++K + + L R G + + Sbjct: 285 DDDHYFSAGGHSTKMLALVEDVKKDLMTTKRTLHLLSKHLDRANIPYLRIDGGCPVPQRQ 344 Query: 99 CTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ + +L + G GLNL N + L W+ +E + R Sbjct: 345 AKLDQFSESDEKRVLVMTTGTGGFGLNLT-CANRVFIIELQWNPG-----VESQAIARAV 398 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD-------LLLNALKK 200 + G + V+V + ++T++E + + R K + +++ ++ Sbjct: 399 RLGQENEVYVTRYVIRDTVEEEMRSQQRWKMQVAALGFEEAPDVIDDEER 448 >gi|325115083|emb|CBZ50639.1| aar147wp, related [Neospora caninum Liverpool] Length = 1866 Score = 65.5 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 6/98 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D +Q G+ +L + GLNL + WW+ + +E + R Sbjct: 1617 DGRALQRQPGGEGRILLCSLKAGNVGLNLTR-ASRCYLMDGWWNPQ-----VENQAMKRI 1670 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V V + T++E + + K + + Sbjct: 1671 WRFGQDKPVKVVRFVCVRTVEERLEEIKEFKGWMARGV 1708 >gi|120554237|ref|YP_958588.1| helicase domain-containing protein [Marinobacter aquaeolei VT8] gi|120324086|gb|ABM18401.1| helicase domain protein [Marinobacter aquaeolei VT8] Length = 1046 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 79/203 (38%), Gaps = 18/203 (8%) Query: 9 RELYCDLQGENI---EAFNSASKTVKCLQLANGAVYYDEE-KHWKEVHDEKIKALEVIIE 64 EL +L GE E S + VK L L ++ E K +++ I L+ Sbjct: 479 DELLYELDGETEGDNEPPASMGELVKTLALVGKSIGSYESLKASDTKYNQLISVLKDYWA 538 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQG-------RTLDKDPCTIQEWNEGKIPLLFAHPA 117 + II+ + L L + + I+++ + Sbjct: 539 QYPDKKIILFAFYKGTLRYLHERLSEEGIGSLVLHGGMDKNEVIRQFRGDAQYNILLSSE 598 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA-VFVYYLIAQNTI 176 G++LQ+ ++L+ + L W+ +Q I RI + G + + ++ +I ++TI Sbjct: 599 VAAEGVDLQF-SSVLINYDLPWNPMRIEQRIGRID-----RIGQEEDRIHIWNMIYEDTI 652 Query: 177 DELVLQRLRTKSTIQDLLLNALK 199 D+ V RL + I + +++ Sbjct: 653 DQRVYDRLLDRLDIFRNAMGSME 675 >gi|90078875|dbj|BAE89117.1| unnamed protein product [Macaca fascicularis] Length = 500 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G+NL ++++ + W+ + ++ + R + G K+ V V+ LI Sbjct: 1 MLSTRAGGLGINL-ASADVVILYDSDWNPQ-----VDLQAMDRAHRIGQKKPVRVFRLIT 54 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALK 199 NT++E +++R K + +++ + Sbjct: 55 DNTVEERIVERAEIKLRLDSIVIQQGR 81 >gi|49387874|dbj|BAD26561.1| SNF2 domain-containing protein-like [Oryza sativa Japonica Group] Length = 602 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 8/102 (7%) Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +N+ K ++ A +C G+ L G + +V + W+ + R + Sbjct: 466 REALMEAFNDMKSNAKVMLASTKACCEGITL-IGASRVVLLDVVWNPS-----VGRQAIG 519 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G ++ V+ Y LI + T ++ R K + LL + Sbjct: 520 RAYRIGQEKIVYTYNLITEGTKEKDKYDRQAKKDHMSKLLFS 561 >gi|138896002|ref|YP_001126455.1| Snf2/Rad54 family helicase [Geobacillus thermodenitrificans NG80-2] gi|134267515|gb|ABO67710.1| Helicase, Snf2/Rad54 family [Geobacillus thermodenitrificans NG80-2] Length = 554 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A + F F G K + + + A + G Sbjct: 369 IIFTEYRATQLYLQWFLKQHGISSVPFRGGFRRGKKDWMQELFKN-HAQVFIAT-EAGGE 426 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ ++ + L W+ +Q I R+ + G V +Y + T++E +L Sbjct: 427 GINLQF-CRYVINYDLPWNPMRLEQRIGRV-----HRLGQTDDVHIYNFAVKQTVEEHIL 480 Query: 182 QRLRTKSTIQDLLLNAL 198 L K + + ++ L Sbjct: 481 TLLYEKIRLFERVVGEL 497 >gi|240274020|gb|EER37538.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H143] Length = 1762 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 9/123 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + + +N G + + G GLN+ G N ++ F ++ Sbjct: 1353 RSYSRLDGKTPIATRQIATKNFNSGFDSQVYLISTRAGGLGLNI-PGANRVIIFDFQFNP 1411 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 E V R + G + V+VY +A T ++++ R K+ + +++ KK Sbjct: 1412 T-----WEEQAVGRAYRLGQLKPVYVYRFLAGGTYEDVMHNRAVFKTQLAFRVVD--KKN 1464 Query: 202 TIH 204 I Sbjct: 1465 PIR 1467 >gi|147789690|emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera] Length = 2238 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 66/222 (29%), Gaps = 58/222 (26%) Query: 30 VKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 ++ + N + + K+ L+ I+ K +++ L Sbjct: 1286 MELRKACNHPLLNYPYFNDFSKDFLVRSCGKMWILDRILIKLQRTGHRVLLFSTMTKLLD 1345 Query: 83 RLQKAFPQGRTLDKD----------PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGN 130 L++ R + + I ++N + + G GLNLQ + Sbjct: 1346 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSAGSDCFIFLLSIRAAGRGLNLQS-AD 1404 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ----------------- 173 +V + + + E V R + G R V V Y+ A Sbjct: 1405 TVVIYDPDPNPKN-----EEQAVARAHRIGQTREVKVIYMEAVVDKISSHQKEDEFRSGG 1459 Query: 174 ---------------NTIDELVL-QRLRTKSTIQDLLLNALK 199 +I+ L+ + K + D ++NA + Sbjct: 1460 TVDSEDDLAGKDRYIGSIESLIRNNIQQYKIDMADEVINAGR 1501 >gi|322489605|emb|CBZ24862.1| putative j-binding protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1022 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +I + ++ + + + + + +L Sbjct: 836 LIIFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRAMQEFSENKDLIVLVLSTKIA 895 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GL+ N +V F WW+ + ++ + R + ++ V VY LI+ T ++ Sbjct: 896 AYGLDFTA-ANHVVLFDSWWNPQ-----VDAQAIARAYRRNQRKPVTVYRLISA-TENKF 948 Query: 180 VLQRLRTKSTIQDLLLNA 197 VL+ K + +L+ Sbjct: 949 VLRSQTRKIALFKCILHE 966 >gi|116629551|ref|YP_814723.1| SNF2 family DNA/RNA helicase [Lactobacillus gasseri ATCC 33323] gi|116095133|gb|ABJ60285.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri ATCC 33323] Length = 917 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 18/157 (11%) Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDK 96 + + +KI+ + I N+ +IV F + + +L K + ++ Sbjct: 718 FIDEDSQKIEQIINICVDSHENSEKVIVFSFFKNYVLKLLKKKLPFLADDIISGDLSSNQ 777 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I ++ +L + G GLN+Q N ++ W E ++R Sbjct: 778 RQEVIDKFSENPNQNVLLVQIDAGGFGLNIQA-ANRVILCEPQWKPST-----ENQAISR 831 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G R V VY L+ + ++DE +++ + K I + Sbjct: 832 AYRMGQNRNVMVYRLLTKESVDETMMEIIHEKEDIFN 868 >gi|311270523|ref|XP_001927177.2| PREDICTED: e1A-binding protein p400 [Sus scrofa] Length = 2866 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 62/165 (37%), Gaps = 19/165 (11%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 + Q+ E + K++AL V+++K + +++ L L+ Sbjct: 1827 QLQQMTALRSLQFPELRLVQFDSGKLEALAVLLQKLRSEGRRVLILSQMVLMLDILEMFL 1886 Query: 89 PQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + ++ +N + +I S G++L + +VF+ Sbjct: 1887 NFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRTTGVSL-VEADAVVFYDN 1945 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + +++ + G +R V +Y L++ N+I+E +L+ Sbjct: 1946 DLNP-----VMDAKAQEWCDRIGRRRDVHIYRLVSGNSIEEKLLK 1985 >gi|296213297|ref|XP_002807207.1| PREDICTED: LOW QUALITY PROTEIN: E1A-binding protein p400-like [Callithrix jacchus] Length = 3069 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 67/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q A + E + K++AL ++++K + +++ L Sbjct: 1789 HAAPYFQQLRQTATPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLML 1848 Query: 82 ARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G+NL + Sbjct: 1849 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRATGINL-VEAD 1907 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + +++ + G + + +Y L++ N+++E +L+ Sbjct: 1908 TVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSVEEKLLK 1954 >gi|311270518|ref|XP_003132906.1| PREDICTED: e1A-binding protein p400-like [Sus scrofa] Length = 2832 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 62/165 (37%), Gaps = 19/165 (11%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 + Q+ E + K++AL V+++K + +++ L L+ Sbjct: 1827 QLQQMTALRSLQFPELRLVQFDSGKLEALAVLLQKLRSEGRRVLILSQMVLMLDILEMFL 1886 Query: 89 PQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + ++ +N + +I S G++L + +VF+ Sbjct: 1887 NFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRTTGVSL-VEADAVVFYDN 1945 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + +++ + G +R V +Y L++ N+I+E +L+ Sbjct: 1946 DLNP-----VMDAKAQEWCDRIGRRRDVHIYRLVSGNSIEEKLLK 1985 >gi|189201379|ref|XP_001937026.1| hypothetical protein PTRG_06693 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187984125|gb|EDU49613.1| hypothetical protein PTRG_06693 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 909 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 41/142 (28%), Gaps = 16/142 (11%) Query: 48 WKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKD 97 + + E I N + IV + L +K Sbjct: 760 HTVFPSKIMTLYEDIQAHCNDSKSIVFSFWKRSLDMVAALLTVNNVSFVRVDGSVPFNKR 819 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ I +L + GLN N + + W+ +E + R Sbjct: 820 KAILNDFKCRNDISVLLMTFGTGAVGLNSLSIANRVHILAPQWNPS-----VEHQAIGRV 874 Query: 157 RQAGFKRAVFVYYLIAQNTIDE 178 + G + V + I T++E Sbjct: 875 VRLGQQNPVTIVRYIVDKTVEE 896 >gi|196248895|ref|ZP_03147595.1| helicase domain protein [Geobacillus sp. G11MC16] gi|196211771|gb|EDY06530.1| helicase domain protein [Geobacillus sp. G11MC16] Length = 556 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A + F F G K + + + A + G Sbjct: 371 IIFTEYRATQLYLQWFLKQHGISSVPFRGGFRRGKKDWMQELFKN-HAQVFIAT-EAGGE 428 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ ++ + L W+ +Q I R+ + G V +Y + T++E +L Sbjct: 429 GINLQF-CRYVINYDLPWNPMRLEQRIGRV-----HRLGQTDDVHIYNFAVKQTVEEHIL 482 Query: 182 QRLRTKSTIQDLLLNAL 198 L K + + ++ L Sbjct: 483 TLLYEKIRLFERVVGEL 499 >gi|225557866|gb|EEH06151.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 1790 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 9/123 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + + +N G + + G GLN+ G N ++ F ++ Sbjct: 1380 RSYSRLDGKTPIATRQIATKNFNSGFDSQVYLISTRAGGLGLNI-PGANRVIIFDFQFNP 1438 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 E V R + G + V+VY +A T ++++ R K+ + +++ KK Sbjct: 1439 T-----WEEQAVGRAYRLGQLKPVYVYRFLAGGTYEDVMHNRAVFKTQLAFRVVD--KKN 1491 Query: 202 TIH 204 I Sbjct: 1492 PIR 1494 >gi|19074332|ref|NP_585838.1| BELONGS TO THE SNF2/RAD54 HELICASE FAMILY [Encephalitozoon cuniculi GB-M1] gi|19068974|emb|CAD25442.1| BELONGS TO THE SNF2/RAD54 HELICASE FAMILY [Encephalitozoon cuniculi GB-M1] Length = 556 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 17/142 (11%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-----------TIQEWNEGKIPLL 112 +V H + L+ F + + ++ + Sbjct: 390 MVEKGMKFVVFCHHTEMMESLEGFFAERNVPMIRIDGSVPSTSRHLLVKKFQENEEVMVA 449 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 +C GL L G +VF L+W+ Q +RI + G K +V + YL+A Sbjct: 450 LLSITACSTGLTLTA-GRAVVFAELYWNPGVLLQAEDRI-----HRIGQKSSVDIIYLVA 503 Query: 173 QNTIDELVLQRLRTKSTIQDLL 194 + TIDE V +L +K + + L Sbjct: 504 KGTIDEYVWPKLLSKLNVLESL 525 >gi|123467717|ref|XP_001317270.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] gi|121900000|gb|EAY05047.1| Type III restriction enzyme, res subunit family protein [Trichomonas vaginalis G3] Length = 904 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 59/168 (35%), Gaps = 18/168 (10%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ---------G 91 EEK +H + I+ N I+ H L + + G Sbjct: 737 LTSEEKVEPVLHWMTSQKFRDILFCQN-RKILFFAHHTVMLKGISEWLTFRNIDHILING 795 Query: 92 RTLDKDPCTI--QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T K+ + + +E + + + G+ L +++VF L + H Sbjct: 796 ETSMKNRKILLDKFKSEPECKIAVLGIETISAGVTL-VEASVVVFAELMYVPATHL---- 850 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V +YYL A ++D+ V + L K + ++ + Sbjct: 851 -QAEDRVHRIGQTQPVDIYYLHAPGSVDDRVWEILERKLEVLGSVITS 897 >gi|290988684|ref|XP_002677026.1| predicted protein [Naegleria gruberi] gi|284090631|gb|EFC44282.1| predicted protein [Naegleria gruberi] Length = 822 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 67/195 (34%), Gaps = 12/195 (6%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--DEKIKALEVIIEKA 66 E + E++ + + K +Q + + + + + + Sbjct: 569 EEFSQEYNDEDVTPESFQTTLKKYIQ-ESHPKLTGSTRVKILKNLVSRIVGGKKEKVVVF 627 Query: 67 NAAPIIVAYHFNS---DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 + + D F + K I ++N G I L + G G+ Sbjct: 628 SGLVCYNSVIVKELSKDNTIKIGVFTGDTSSPKRAEIINQFNRGIINTLLISKNAGGVGI 687 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 +L +V F+L ++ + + + R + K V ++ L+ + ++D V + Sbjct: 688 DLTT-ATNVVLFNLDFNFAK-----DDQAICRLVRKNQKEQVKIFRLVCRESVDVAVKEL 741 Query: 184 LRTKSTIQDLLLNAL 198 K+ I D LL+ + Sbjct: 742 QAHKTVIFDKLLDDI 756 >gi|68075977|ref|XP_679908.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56500750|emb|CAH98546.1| conserved hypothetical protein [Plasmodium berghei] Length = 528 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 7/130 (5%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLL 112 K + I + + + I+E+ + + Sbjct: 405 NKPDDDDAYIRSPSVMSTSSQLSEKKFQNNIYVRLDGSTNTIERQQIIKEFSENDNVFIF 464 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL N ++ W+ +R R + G K+ V++Y L Sbjct: 465 LLSTKAGGVGLNL-IAANHVILMDQDWNP-----HNDRQAEDRVHRLGQKKEVYIYRLCC 518 Query: 173 QNTIDELVLQ 182 +NTI+E VL+ Sbjct: 519 KNTIEETVLK 528 >gi|237840979|ref|XP_002369787.1| DNA repair protein, putative [Toxoplasma gondii ME49] gi|211967451|gb|EEB02647.1| DNA repair protein, putative [Toxoplasma gondii ME49] gi|221483703|gb|EEE22015.1| DNA repair protein, putative [Toxoplasma gondii GT1] Length = 1733 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 41/135 (30%), Gaps = 11/135 (8%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-----TIQEWNEGKIPLLFAHPASC 119 DL + G K ++ ++ + +L + Sbjct: 1475 NHENCGGGPFAGIFQDLRDSKGDRDTGLVATKREIGNGCTLRRQRDDEEGRILLCSLKAG 1534 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GLNL + WW+ + +E + R + G + V V + T++E Sbjct: 1535 NVGLNLTR-ASRCYLMDGWWNPQ-----VENQAMKRIWRFGQDKPVKVVRFVCVRTVEER 1588 Query: 180 VLQRLRTKSTIQDLL 194 + + K + + Sbjct: 1589 LEEIKEFKGWMARGV 1603 >gi|154270291|ref|XP_001536001.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150410015|gb|EDN05403.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1687 Score = 65.2 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 9/123 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + + +N G + + G GLN+ G N ++ F ++ Sbjct: 1289 RSYSRLDGKTPIATRQIATKNFNSGFDSQVYLISTRAGGLGLNI-PGANRVIIFDFQFNP 1347 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 E V R + G + V+VY +A T ++++ R K+ + +++ KK Sbjct: 1348 T-----WEEQAVGRAYRLGQLKPVYVYRFLAGGTYEDVMHNRAVFKTQLAFRVVD--KKN 1400 Query: 202 TIH 204 I Sbjct: 1401 PIR 1403 >gi|302764876|ref|XP_002965859.1| hypothetical protein SELMODRAFT_84719 [Selaginella moellendorffii] gi|300166673|gb|EFJ33279.1| hypothetical protein SELMODRAFT_84719 [Selaginella moellendorffii] Length = 429 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 32/197 (16%) Query: 26 ASKTVKCLQLANGA-----VYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFN 78 ++ + + V E + K + ++ + +I+ + Sbjct: 180 LAEDSRLARACVHPCFAVDVESPELEQQDPKAGAKTAFVMELLRFLRNKPEKLIIFGQYR 239 Query: 79 SDLARLQKAFPQ---------------GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGH 121 L L+ + ++ +N ++ +CG Sbjct: 240 QPLELLKNMIMERLGWRELHEVLYMSGETATNERVRISSTFNSKSSTARVILVSIKACGE 299 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV- 180 G++L GG+ +V W+ R V+R + G K+ V+VY L+ NT++ V Sbjct: 300 GISL-VGGSRVVVLDTAWNPSTV-----RQAVSRAFRIGQKKKVYVYRLLVGNTLEHEVE 353 Query: 181 -LQRLRTKSTIQDLLLN 196 L+R K + L + Sbjct: 354 KLRRSMRKDFLAMALFH 370 >gi|42780097|ref|NP_977344.1| SNF2 family helicase [Bacillus cereus ATCC 10987] gi|4584117|emb|CAB40614.1| SNF2-like helicase [Bacillus cereus ATCC 10987] gi|42736015|gb|AAS39952.1| helicase, SNF2 family [Bacillus cereus ATCC 10987] Length = 631 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 70/171 (40%), Gaps = 24/171 (14%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDP 98 + K + +I +IV F + ++++ Q G D+ Sbjct: 449 IPSAKFEKGIQLIMDLVGKGKKVIVWGMFVKTMQKIKQVLQQKGVSVNLVYGGTPKDERV 508 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ +G++ ++ ++P + G ++L + ++F ++L Q +RI + Sbjct: 509 KLINDFRDGEVEVMISNPNTLGESISLHQTVHDAIYFEYNFNLTFMLQSRDRIHRLGLKD 568 Query: 159 AGFKRAVFVYYLIAQ------NTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R YYL+ + ID+ + +RL+ K + L+A+ E + Sbjct: 569 DQYTR---YYYLMTEGDRAHGGFIDQAIYKRLKEKEQVM---LDAIDGELL 613 >gi|325095597|gb|EGC48907.1| SNF2 family helicase/ATPase [Ajellomyces capsulatus H88] Length = 1787 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 9/123 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + + +N G + + G GLN+ G N ++ F ++ Sbjct: 1380 RSYSRLDGKTPIATRQIATKNFNSGFDSQVYLISTRAGGLGLNI-PGANRVIIFDFQFNP 1438 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 E V R + G + V+VY +A T ++++ R K+ + +++ KK Sbjct: 1439 T-----WEEQAVGRAYRLGQLKPVYVYRFLAGGTYEDVMHNRAVFKTQLAFRVVD--KKN 1491 Query: 202 TIH 204 I Sbjct: 1492 PIR 1494 >gi|198411801|ref|XP_002126705.1| PREDICTED: similar to RAD54-like [Ciona intestinalis] Length = 158 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F W+ + + R + G K+ F+Y L+ TI+E + QR K + Sbjct: 1 MFDPDWNPAN-----DEQAMARVWRDGQKKPCFIYRLLGTGTIEEKIFQRQAHKKALSSC 55 Query: 194 LLN 196 +++ Sbjct: 56 VVD 58 >gi|90420968|ref|ZP_01228872.1| putative helicase [Aurantimonas manganoxydans SI85-9A1] gi|90334746|gb|EAS48522.1| putative helicase [Aurantimonas manganoxydans SI85-9A1] Length = 543 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 71/239 (29%), Gaps = 39/239 (16%) Query: 2 KQYHKFQ----RELYCDLQGENIEAFNSASK-TVKCLQLAN------------GAVYYDE 44 + Y + RE L + + F + + + LQ + Sbjct: 277 ELYELMRLEVAREASALLDIQGRQTFRALGRSVSRLLQFVSNPSLLAAQIGFAHHDLLAA 336 Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL---------------QKAFP 89 E + +++ F ++ + A Sbjct: 337 VLAEGEGPKLQYVLKRARQLSREGHKVLIWSSFVRNVEYMASRLADLGAVYIHGGVDAGD 396 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + ++ ++ + ++ A+PA+ G++L + ++ ++ + Q + Sbjct: 397 EDDADTREGKIKAFHDDENVRVMVANPAAASEGISLHRVCHHAIYLDRTFNAAHYLQSED 456 Query: 150 RIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLLN--ALKKETIHV 205 RI + + ++ T+DE V RL K LN +L + I + Sbjct: 457 RIHRFGLPRDQK----TIIEIVECTRTVDETVRSRLGFKIGEMARALNDSSLAPDPIQI 511 >gi|327351004|gb|EGE79861.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ATCC 18188] Length = 1775 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 9/123 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + + +N + + + G GLN+ G N ++ F ++ Sbjct: 1384 RTYSRLDGKTPVATRQVATKNFNSDSNTQVYLISTRAGGLGLNI-PGANRVIIFDFQFNP 1442 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 E V R + G + V+VY +A T ++++ R K+ + +++ KK Sbjct: 1443 T-----WEEQAVGRAYRLGQLKPVYVYRFLAGGTYEDIMHNRAVFKTQLAFRVVD--KKN 1495 Query: 202 TIH 204 I Sbjct: 1496 PIR 1498 >gi|261198491|ref|XP_002625647.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] gi|239594799|gb|EEQ77380.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] gi|239610080|gb|EEQ87067.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3] Length = 1776 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 9/123 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + + +N + + + G GLN+ G N ++ F ++ Sbjct: 1385 RTYSRLDGKTPVATRQVATKNFNSDSNTQVYLISTRAGGLGLNI-PGANRVIIFDFQFNP 1443 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 E V R + G + V+VY +A T ++++ R K+ + +++ KK Sbjct: 1444 T-----WEEQAVGRAYRLGQLKPVYVYRFLAGGTYEDIMHNRAVFKTQLAFRVVD--KKN 1496 Query: 202 TIH 204 I Sbjct: 1497 PIR 1499 >gi|167525194|ref|XP_001746932.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774712|gb|EDQ88339.1| predicted protein [Monosiga brevicollis MX1] Length = 712 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 47/146 (32%), Gaps = 7/146 (4%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-I 109 + D +++I + + F + + Sbjct: 411 LEDLMNHDGKLLIFAHHKTLLDELATFLCQRQLRHIRIDGSTPTHLRQQLCNSFQDDVLC 470 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G GL L N +VF L+W+ R + G + V V Y Sbjct: 471 RVAVLSITTAGTGLTLHA-ANTVVFAELYWNPGHLY-----QAEDRAHRVGQRHNVNVRY 524 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 L+ T+D+++ +L+ K+ I + Sbjct: 525 LLCPGTLDDVMWSQLQRKAKIVQRAM 550 >gi|56420961|ref|YP_148279.1| DNA/RNA helicase [Geobacillus kaustophilus HTA426] gi|56380803|dbj|BAD76711.1| DNA/RNA helicase (SNF2 family) [Geobacillus kaustophilus HTA426] Length = 554 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A + F F G K + + + + A + G Sbjct: 369 IIFTEYRATQLYLQWFLKQHGISSVPFRGGFRRGKKDWMQELF-KHHAQVFIAT-EAGGE 426 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ ++ + L W+ +Q I R+ + G V++Y + T++E +L Sbjct: 427 GINLQF-CRYVINYDLPWNPMRLEQRIGRV-----HRLGQTDDVYIYNFAVKQTVEEHIL 480 Query: 182 QRLRTKSTIQDLLLNAL 198 L K + + ++ L Sbjct: 481 TLLYEKIRLFERVVGEL 497 >gi|269793095|ref|YP_003317999.1| helicase domain-containing protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100730|gb|ACZ19717.1| helicase domain protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 969 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 46/119 (38%), Gaps = 8/119 (6%) Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + F ++ L++ + + +L + G GLNLQ+ +++ Sbjct: 512 MLMRFLTERGITVVCLNGSMDLEERKRVQDAF-AKDVRILI-STDAGGEGLNLQF-CHVV 568 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + + + W+ +Q I R+ + G V + +++++ V + L K + Sbjct: 569 INYDIPWNPMRLEQRIGRVD-----RIGQTHTVRAINFVFEDSVEHRVREVLEEKLAVI 622 >gi|242769688|ref|XP_002341821.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] gi|218725017|gb|EED24434.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] Length = 1975 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 72/197 (36%), Gaps = 16/197 (8%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 ++++ + + + + S+ K + A +E+H E ++II N Sbjct: 1635 KKIFLKVLSKKLSPDSPLSQ-TKLI-ATTSAKLTYLLDRVQELHKE----EKIIIFYENN 1688 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQY 127 L + + + + + E + +L HGL++ Sbjct: 1689 NTAFWIAEGLEMLGIDFRIYANTLKTSQKAAYLSLFEESSSVRVLLMDLRQASHGLHI-A 1747 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + + W + +E + R + G R VFV L+ ++T++E +L R + Sbjct: 1748 SASRVFIVNPIWRPQ-----VESQAIKRAHRIGQTRPVFVETLVLKDTLEEKMLHR---R 1799 Query: 188 STIQDLLLNALKKETIH 204 + + + +K+ + Sbjct: 1800 QEMSNSEMQHAEKDMLD 1816 >gi|114596227|ref|XP_001144339.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 isoform 2 [Pan troglodytes] Length = 955 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 ++++ + W+ + ++ + R + G + V V+ I NT++E +++R Sbjct: 471 LATADVVILYDSDWNPQ-----VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAE 525 Query: 186 TKSTIQDLLLNALK 199 K + +++ + Sbjct: 526 MKLRLDSIVIQQGR 539 >gi|297852448|ref|XP_002894105.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297339947|gb|EFH70364.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 673 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 55/157 (35%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTI 101 KI A+ + +V H S L + + + Sbjct: 468 AKIPAVLDYLGTVLEAGCKFLVFAHHQSMLDAIHQFLKKKKVGCIRIDGSTPASSRQALV 527 Query: 102 QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 ++ + +I + G G+ L + ++F L W + R + G Sbjct: 528 SDFQDKDEIKAAVLSIRAAGVGITLTA-ASTVIFAELAWTPGDLI-----QAEDRAHRIG 581 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +V ++YL+A +T+D+++ +++K +L+ Sbjct: 582 QVSSVNIHYLLANDTVDDIIWDVVQSKLDNLGQMLDG 618 >gi|225454280|ref|XP_002276245.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 2268 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 66/222 (29%), Gaps = 58/222 (26%) Query: 30 VKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 ++ + N + + K+ L+ I+ K +++ L Sbjct: 1316 MELRKACNHPLLNYPYFNDFSKDFLVRSCGKMWILDRILIKLQRTGHRVLLFSTMTKLLD 1375 Query: 83 RLQKAFPQGRTLDKD----------PCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGN 130 L++ R + + I ++N + + G GLNLQ + Sbjct: 1376 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSAGSDCFIFLLSIRAAGRGLNLQS-AD 1434 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ----------------- 173 +V + + + E V R + G R V V Y+ A Sbjct: 1435 TVVIYDPDPNPKN-----EEQAVARAHRIGQTREVKVIYMEAVVDKISSHQKEDEFRSGG 1489 Query: 174 ---------------NTIDELVL-QRLRTKSTIQDLLLNALK 199 +I+ L+ + K + D ++NA + Sbjct: 1490 TVDSEDDLAGKDRYIGSIESLIRNNIQQYKIDMADEVINAGR 1531 >gi|193084170|gb|ACF09835.1| helicase SNF2/RAD54 family [uncultured marine crenarchaeote AD1000-207-H3] Length = 569 Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 6/107 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G++ I + G LL A + G+NL ++F L W + R Sbjct: 444 GQSDKVRQKNIDYFQNGDTKLLIAGLRAGNLGINLTR-AKYVIFAELDWVPA-----VHR 497 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K VF YYLI + T+DE V L KS D +++ Sbjct: 498 QAEDRLHRIGQKNTVFAYYLIGKRTLDEHVANILVDKSYEIDAIMDE 544 >gi|239610143|gb|EEQ87130.1| SNF2-family ATP dependent chromatin remodeling factor snf21 [Ajellomyces dermatitidis ER-3] Length = 1385 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + W+ + + R + G K V + LI N+++E +L+ + K + Sbjct: 898 VIIYDSDWNPHQ-----DLQAQDRAHRIGQKNEVRILRLITSNSVEERILEAAQFKLDMD 952 Query: 192 DLLLNALK 199 ++ A K Sbjct: 953 GKVIQAGK 960 >gi|157866423|ref|XP_001687603.1| j-binding protein [Leishmania major strain Friedlin] gi|68125217|emb|CAJ02566.1| putative j-binding protein [Leishmania major strain Friedlin] Length = 1022 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 46/130 (35%), Gaps = 7/130 (5%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 + ++ + + + + + +L +GL+ Sbjct: 844 GSQDLIHRTLTALRVCTFTVRGRDSQDRRRRAMQEFSENKDLIVLVLSTKIAAYGLDFTA 903 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 N +V F WW+ + ++ + R + ++ V VY LI+ T ++ VL+ K Sbjct: 904 -ANHVVLFDSWWNPQ-----VDAQAIARAYRRNQRKPVTVYRLISA-TENKFVLRSQTRK 956 Query: 188 STIQDLLLNA 197 + +L+ Sbjct: 957 IALFKCILHE 966 >gi|156101331|ref|XP_001616359.1| helicase [Plasmodium vivax SaI-1] gi|148805233|gb|EDL46632.1| helicase, putative [Plasmodium vivax] Length = 877 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 9/146 (6%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCG 120 ++ + + F + + ++K I+ N+ + + +CG Sbjct: 636 LLFCHHKLVMDEIDDFLREKKTMFIRVDGLTPIEKREVYIKSFQNDDHVKIALLSLTACG 695 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV-FVYYLIAQNTIDEL 179 GLNL N +VF L+W + R + G V ++YLIAQNTIDE+ Sbjct: 696 IGLNLTA-ANTVVFGELYWVPGQII-----QAEDRAHRIGTTHEVVNIHYLIAQNTIDEI 749 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 V + + K LN ++ ++++V Sbjct: 750 VWKIINRKWNTLTTALNGME-DSLNV 774 >gi|297529405|ref|YP_003670680.1| helicase [Geobacillus sp. C56-T3] gi|297252657|gb|ADI26103.1| helicase domain protein [Geobacillus sp. C56-T3] Length = 554 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A + F F G K + + + + A + G Sbjct: 369 IIFTEYRATQLYLQWFLKQHGISSVPFRGGFRRGKKDWMQELF-KHHAQVFIAT-EAGGE 426 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ ++ + L W+ +Q I R+ + G V++Y + T++E +L Sbjct: 427 GINLQF-CRYVINYDLPWNPMRLEQRIGRV-----HRLGQTDDVYIYNFAVKQTVEEHIL 480 Query: 182 QRLRTKSTIQDLLLNAL 198 L K + + ++ L Sbjct: 481 TLLYEKIRLFERVVGEL 497 >gi|302325491|gb|ADL24692.1| SNF2/helicase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 749 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 71/221 (32%), Gaps = 36/221 (16%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + +RE E + + ++ +K ++ + EK K + +I + II Sbjct: 397 YGEDEREG---FDDEATISVQTLAEPLKLMENEIDHINLLLEKATKVTSETRINRIVEII 453 Query: 64 EK-ANAAPIIVAYHFNSDLARL--------------------------QKAFPQGRTLDK 96 ++ +++ + + + Sbjct: 454 KEKYPNDQVLLFTEYKRTQSLMMTELMKVWGDNSVTIINGDESLKDVVYPDGCSRDISIS 513 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +++N G++ + G G++LQ ++L+ L W+ Q + R+ Sbjct: 514 RNDACEKFNNGEVR-FLISTEAAGEGIDLQKNCHVLIHIDLPWNPMRLHQRVGRV----- 567 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G V V + + I+ + L K +L+ Sbjct: 568 HRLGQTHDVEVVSVRNPDNIESKIWGYLEEKIDQIQKMLSE 608 >gi|224071798|ref|XP_002195016.1| PREDICTED: similar to E1A binding protein p400 [Taeniopygia guttata] Length = 2991 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 63/167 (37%), Gaps = 19/167 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 + QL + + + K++AL V+++K + +++ L L+ Sbjct: 1750 LHQLQQLTTPHLLQFPDLRLVQYDSGKLEALAVLLQKLKSEGRRVLILSQMILMLDILEL 1809 Query: 87 AFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ ++ +N + +I S G+NL + +VF+ Sbjct: 1810 FLNFHFLTFVRIDEYANQEQRQELMKIFNRDKRIFCAILSSHSRSTGVNL-VEADTVVFY 1868 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + +++ + G + + +Y L++ N+++E +L+ Sbjct: 1869 DNDLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSVEEKLLK 1910 >gi|209881905|ref|XP_002142390.1| helicase [Cryptosporidium muris RN66] gi|209557996|gb|EEA08041.1| helicase conserved C-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 836 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 8/147 (5%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 H E + A+E I+ K + + + G ++ + N + Sbjct: 685 HHEMLDAIETILVKRKRNKSLSEIN-KHFVYIRIDGKTPGNK--REEYVKEFQNNINCKV 741 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 +CG GLNL G ++F L+W Q +R + ++YL+ Sbjct: 742 AVLSITACGQGLNLTSAGT-VIFAELYWVPGFMLQAEDRCHR----MGTQYSCINIHYLV 796 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNAL 198 A+NT+D+ + L K I L+ + Sbjct: 797 AENTLDDKMWGILYKKQKIMASTLDGI 823 >gi|159470465|ref|XP_001693380.1| predicted protein [Chlamydomonas reinhardtii] gi|158277638|gb|EDP03406.1| predicted protein [Chlamydomonas reinhardtii] Length = 594 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 58/158 (36%), Gaps = 5/158 (3%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 + ++ K + E ++E + ++ + + D++ Sbjct: 418 IMQLWRQNAKLKGAAVAEYCEDLLEGEDPPKFLLFGEGRKLRFKYIRIDGDTPGEDRNRL 477 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 T + E + + + G GL +++VF L W + QQ +R Q Sbjct: 478 TQKFQEEEDVKVALLSIKAAGVGLTFTR-SSLVVFSELSWIPGDIQQAEDRCHRIGQAAT 536 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V ++YL+ + ++DE++ L++K L+ Sbjct: 537 S----VNIHYLLVRGSVDEIMWDCLQSKLGSVGKALDG 570 >gi|167524411|ref|XP_001746541.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774811|gb|EDQ88437.1| predicted protein [Monosiga brevicollis MX1] Length = 1057 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 53/168 (31%), Gaps = 19/168 (11%) Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLD 95 +KE KI A+ I +V + L + Sbjct: 361 YKETGAAKIPAVREYIRGLCQTGDKFLVFAYHLDVLDAVHVEVVAAKLDYIMIRGDTPVS 420 Query: 96 KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++++ + + G GL L + ++F L W I Sbjct: 421 ERQAGVRKFQGNDSCRVAILSMTAAGQGLTLTA-ASTVIFAELHWTPG-----IIEQAED 474 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G V V YL+A+ T+D+ + + K + L+ ++ Sbjct: 475 RVHRIGQGDPVNVQYLVARRTLDDTMWNIVDRKVGVVSSALDGQRERL 522 >gi|268324801|emb|CBH38389.1| conserved hypothetical protein, ATP-dependent helicase related [uncultured archaeon] Length = 1120 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 66/170 (38%), Gaps = 18/170 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD----------LARLQKAFP 89 + + E +E+ + +K + I+ +++ F Sbjct: 455 IGFAETVKAREIESKLVKLRDDILSNIGDMKLLIFTEFRDTVDYLVAKLTSWGYKVNTIH 514 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +D + + ++ A A+ G+NLQ+ +++V + + W+ +Q + Sbjct: 515 GSMGMDARIEAEHRFKN-ETQIMVATEAAG-EGINLQF-CSLMVNYDIPWNPNRLEQRMG 571 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 RI + G + VF+Y +++++T + +L RL K L + + Sbjct: 572 RI-----HRYGQDKEVFIYNMVSKDTREGQILDRLFDKLAAMREALGSDR 616 >gi|254304002|ref|ZP_04971360.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324194|gb|EDK89444.1| SWF/SNF family helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 401 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 9/127 (7%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI---PLLFAHPASCGHGLNLQYG 128 ++ Y+FN + ++K + I ++++ + G G+ LQY Sbjct: 270 LIFYNFNREAREIKKIIKVDFEVSGAVSNIPKFDDYDTLKGKTTLVQIQAGGAGIELQYN 329 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++FFS W +++ + R + G K V VY I + TI+E V RL K Sbjct: 330 -SEVIFFSPTWSFQDYS-----QALGRAYRIGQKNKVTVYKYIGKRTIEERVYARLDEKK 383 Query: 189 TIQDLLL 195 + LL Sbjct: 384 DFAEKLL 390 >gi|126011014|ref|YP_001039764.1| hypothetical protein BcepF1.080 [Burkholderia ambifaria phage BcepF1] gi|119712590|gb|ABL96811.1| unknown [Burkholderia ambifaria phage BcepF1] Length = 525 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 68/182 (37%), Gaps = 17/182 (9%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-----------NS 79 K Q+ +G + + E + + L + IV + S Sbjct: 349 KMKQVVSGFINVEGEPVLIDPENNPRMKLFSEYMEGVDGQTIVWCLYEVEILQVAEKLRS 408 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R+ + + + + I ++ G I + H A+ G GL L +++S Sbjct: 409 MGRRVATYYGKTKKGETREKIIDDFQNGLIDDIVGHAAALGIGLTLTA-ATTSLYYSCDR 467 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + E Q +R + G ++ IA++TIDE ++ K+ + +++++ Sbjct: 468 NNELRLQSEDR-----NHRIGTVKSPVYVDFIAEDTIDEDDMRGRAFKTELANIVIDRTA 522 Query: 200 KE 201 ++ Sbjct: 523 RK 524 >gi|304311832|ref|YP_003811430.1| hypothetical protein HDN1F_22020 [gamma proteobacterium HdN1] gi|301797565|emb|CBL45785.1| Hypothetical protein HDN1F_22020 [gamma proteobacterium HdN1] Length = 912 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 39/114 (34%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + G I +N P L + G G++L ++ L W+ Sbjct: 753 HPVRRAYGGTERHVRERLIALFNTPFAPELLVASSVMGEGIDLHQECRFVIHHDLDWNPS 812 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q R+ R + VY T DE + + ++ ++ D+++ Sbjct: 813 VLEQRTGRLDRIGALADRLGRNIEVYEPYLAGTHDEKMYKVVKDRAQWFDIVMG 866 >gi|293352708|ref|XP_002728046.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Rattus norvegicus] Length = 1069 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + ++ +V H S L + + ++ Sbjct: 326 VKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKARYIRIDGSVPSSERIHLVNQFQ 385 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL + +VF L+WD + R + G + Sbjct: 386 KDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELFWDPGHI-----KQAEDRAHRIGQCSS 439 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 440 VNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKL 477 >gi|261417712|ref|YP_003251394.1| SNF2-related protein [Geobacillus sp. Y412MC61] gi|319767479|ref|YP_004132980.1| helicase [Geobacillus sp. Y412MC52] gi|261374169|gb|ACX76912.1| SNF2-related protein [Geobacillus sp. Y412MC61] gi|317112345|gb|ADU94837.1| helicase domain protein [Geobacillus sp. Y412MC52] Length = 554 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 8/137 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II A + F F G K + + + + A + G Sbjct: 369 IIFTEYRATQLYLQWFLKQHGISSVPFRGGFRRGKKDWMQELF-KHHAQVFIAT-EAGGE 426 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NLQ+ ++ + L W+ +Q I R+ + G V++Y + T++E +L Sbjct: 427 GINLQF-CRYVINYDLPWNPMRLEQRIGRV-----HRLGQTDDVYIYNFAVKQTVEEHIL 480 Query: 182 QRLRTKSTIQDLLLNAL 198 L K + + ++ L Sbjct: 481 TLLYEKIRLFERVVGEL 497 >gi|293341309|ref|XP_002724934.1| PREDICTED: zinc finger, RAN-binding domain containing 3-like [Rattus norvegicus] Length = 1037 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + ++ +V H S L + + ++ Sbjct: 326 VKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKARYIRIDGSVPSSERIHLVNQFQ 385 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL + +VF L+WD + R + G + Sbjct: 386 KDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELFWDPGHI-----KQAEDRAHRIGQCSS 439 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 440 VNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKL 477 >gi|328700856|ref|XP_003241405.1| PREDICTED: transcriptional regulator ATRX homolog [Acyrthosiphon pisum] Length = 1155 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 40/102 (39%), Gaps = 8/102 (7%) Query: 97 DPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +N + + + G N+ G N ++ S W+ + + Sbjct: 796 RNQMCEAFNNPENTAKVFLLSMGTGVLGYNM-VGANRVLLLSTSWNPSN-----DLQAIY 849 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G ++ V+V L+A+ T++ R +K + +++ Sbjct: 850 RCLRFGQQKTVYVNRLLAKGTVEPKAYYRQISKLGMASSVVD 891 >gi|302687500|ref|XP_003033430.1| hypothetical protein SCHCODRAFT_15473 [Schizophyllum commune H4-8] gi|300107124|gb|EFI98527.1| hypothetical protein SCHCODRAFT_15473 [Schizophyllum commune H4-8] Length = 2254 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 40/122 (32%), Gaps = 1/122 (0%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D ++ +G + + N K +L + N +F S Sbjct: 2125 DYHKIPHLEIKGSASARSTALDKFQNGSKERVLLLNVRDESASGANLTCANHAIFLSPLH 2184 Query: 140 DLE-EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + Q E V R + G ++ V ++ I +TID + ++ Q + + Sbjct: 2185 APTKDLYQAWETQAVGRVVRYGQQKPVQIHRFITMDTIDSEIFEKQHADLAQQGKAIEDV 2244 Query: 199 KK 200 + Sbjct: 2245 TR 2246 >gi|320033549|gb|EFW15496.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 1107 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 6/105 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ + + I +L + + G GL+L + LWW+ Q Sbjct: 972 PPSERHRDIEEFRTDPSIRVLISSLKAGGTGLSLT-MAEKCILIDLWWNEAMEQ-----Q 1025 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V + + +N+ID+ + KS+ + + Sbjct: 1026 AFCRLFRYGQKKEVEIVRITVKNSIDDRIQLIQNAKSSNIEKTMG 1070 >gi|71274979|ref|ZP_00651267.1| hypothetical protein XfasaDRAFT_2287 [Xylella fastidiosa Dixon] gi|71898395|ref|ZP_00680568.1| hypothetical protein XfasoDRAFT_3433 [Xylella fastidiosa Ann-1] gi|71164711|gb|EAO14425.1| hypothetical protein XfasaDRAFT_2287 [Xylella fastidiosa Dixon] gi|71731918|gb|EAO33976.1| hypothetical protein XfasoDRAFT_3433 [Xylella fastidiosa Ann-1] Length = 104 Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 49/68 (72%) Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + DLE +QQ++ERIG TRQ QAG KR VF+++++A T+DELV+ R +K +QDL Sbjct: 23 LCPVHGDLEHYQQIVERIGPTRQAQAGHKRPVFIHHIVAAGTVDELVMARRESKREVQDL 82 Query: 194 LLNALKKE 201 LL A+K+ Sbjct: 83 LLEAVKRR 90 >gi|331284125|ref|NP_056224.3| E1A-binding protein p400 [Homo sapiens] Length = 3123 Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1832 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1891 Query: 82 ARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G+NL + Sbjct: 1892 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINL-VEAD 1950 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + +++ + G + + +Y L++ N+I+E +L+ Sbjct: 1951 TVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 1997 >gi|317373565|sp|Q96L91|EP400_HUMAN RecName: Full=E1A-binding protein p400; AltName: Full=CAG repeat protein 32; AltName: Full=Domino homolog; Short=hDomino; AltName: Full=Trinucleotide repeat-containing gene 12 protein; AltName: Full=p400 kDa SWI2/SNF2-related protein Length = 3159 Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1868 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1927 Query: 82 ARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G+NL + Sbjct: 1928 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINL-VEAD 1986 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + +++ + G + + +Y L++ N+I+E +L+ Sbjct: 1987 TVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 2033 >gi|297263902|ref|XP_001105690.2| PREDICTED: e1A-binding protein p400-like isoform 2 [Macaca mulatta] Length = 3268 Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1973 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 2032 Query: 82 ARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G+NL + Sbjct: 2033 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINL-VEAD 2091 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + +++ + G + + +Y L++ N+I+E +L+ Sbjct: 2092 TVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 2138 >gi|168270576|dbj|BAG10081.1| E1A binding protein p400 [synthetic construct] Length = 3043 Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1751 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1810 Query: 82 ARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G+NL + Sbjct: 1811 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINL-VEAD 1869 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + +++ + G + + +Y L++ N+I+E +L+ Sbjct: 1870 TVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 1916 >gi|119618942|gb|EAW98536.1| E1A binding protein p400, isoform CRA_c [Homo sapiens] Length = 2066 Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1832 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1891 Query: 82 ARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G+NL + Sbjct: 1892 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINL-VEAD 1950 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + +++ + G + + +Y L++ N+I+E +L+ Sbjct: 1951 TVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 1997 >gi|119618940|gb|EAW98534.1| E1A binding protein p400, isoform CRA_a [Homo sapiens] Length = 3081 Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1785 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1844 Query: 82 ARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G+NL + Sbjct: 1845 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINL-VEAD 1903 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + +++ + G + + +Y L++ N+I+E +L+ Sbjct: 1904 TVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 1950 >gi|15529034|gb|AAK97789.1| p400 SWI2/SNF2-related protein [Homo sapiens] Length = 3124 Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1832 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1891 Query: 82 ARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G+NL + Sbjct: 1892 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINL-VEAD 1950 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + +++ + G + + +Y L++ N+I+E +L+ Sbjct: 1951 TVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 1997 >gi|302802704|ref|XP_002983106.1| hypothetical protein SELMODRAFT_117561 [Selaginella moellendorffii] gi|300149259|gb|EFJ15915.1| hypothetical protein SELMODRAFT_117561 [Selaginella moellendorffii] Length = 429 Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 67/197 (34%), Gaps = 32/197 (16%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWK-----EVHDEKIKALEVIIE--KANAAPIIVAYHFN 78 ++ + + + + + + K + ++ + +I+ + Sbjct: 180 LAEDSRLARACVHPCFAVDVESPQLEQQDPKAGAKTAFVMELLRFLRNKPEKLIIFGQYR 239 Query: 79 SDLARLQKAFPQ---------------GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGH 121 L L+ + ++ +N ++ +CG Sbjct: 240 QPLELLKNMIMERLGWRELHEVLYMSGETATNERVRISSTFNSKSSTARVILVSIKACGE 299 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV- 180 G++L GG+ +V W+ R V+R + G K+ V+VY L+ NT++ V Sbjct: 300 GISL-VGGSRVVVLDTAWNPSTV-----RQAVSRAFRIGQKKKVYVYRLLVGNTLEHEVE 353 Query: 181 -LQRLRTKSTIQDLLLN 196 L+R K + L + Sbjct: 354 KLRRSMRKDFLAMALFH 370 >gi|255723742|ref|XP_002546800.1| hypothetical protein CTRG_01105 [Candida tropicalis MYA-3404] gi|240134691|gb|EER34245.1| hypothetical protein CTRG_01105 [Candida tropicalis MYA-3404] Length = 475 Score = 64.8 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 22/167 (13%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ------------KA 87 +Y + I+ L+ + + + +V F+S L ++ Sbjct: 290 LYLYDPNRSSSKIQALIRHLKNLHSQVPNSKAVVFSQFSSYLDIIETELKLASDDFIVFK 349 Query: 88 FPQGRTLDKDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F ++ ++ +N GKI +L + G GLNL + WW Sbjct: 350 FDGRLNMNDRSKLLESFNKPLTNGKIAILLLSLRAGGVGLNLTT-ASRAFMMDPWWSPSV 408 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 Q I+RI + G V V I +N+I+ +L+ K I Sbjct: 409 EDQAIDRI-----HRIGQNETVKVVRFIMENSIETKMLKIQDLKKQI 450 >gi|242046444|ref|XP_002461093.1| hypothetical protein SORBIDRAFT_02g040560 [Sorghum bicolor] gi|241924470|gb|EER97614.1| hypothetical protein SORBIDRAFT_02g040560 [Sorghum bicolor] Length = 756 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 19/160 (11%) Query: 54 EKIKALEVII--EKANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCT 100 KI A+ + ++ H + +++ + + Sbjct: 512 AKIPAVLDFLGTMIEAGCKFLIFAHHQPMIDAIEQHLSKKKVKCIKIDGKTPLTTRQTLV 571 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I + G+G+ L + ++F L W + R + G Sbjct: 572 TSFQENDDIKAAVLSIKAGGYGITLTA-ASTVIFAELSWTPGDII-----QAEDRAHRIG 625 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +V VYYL+A T D+L+ ++ K +L+ +K Sbjct: 626 QVSSVNVYYLLANGTADDLMWDSVQGKLENLGQMLDGQEK 665 >gi|291235012|ref|XP_002737441.1| PREDICTED: chromodomain helicase DNA binding protein 1-like [Saccoglossus kowalevskii] Length = 834 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 42/113 (37%), Gaps = 19/113 (16%) Query: 98 PCTIQEWNEGKIPLLFAHPA-------------SCGHGLNLQYGGNILVFFSLWWDLEEH 144 + N +L G GLNL + ++F ++ + Sbjct: 259 DQLLSFLNSRAHKVLLFSQMTRMLDIIQDYLGYRGGQGLNL-ASADTVIFVDSDFNPQN- 316 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V + L+ ++T++E++L+R K ++ + ++ Sbjct: 317 ----DLQAAARAHRIGQTKPVKIIRLVGRDTVEEIILKRADEKLSLTNTVIEG 365 >gi|237830003|ref|XP_002364299.1| helicase, putative [Toxoplasma gondii ME49] gi|211961963|gb|EEA97158.1| helicase, putative [Toxoplasma gondii ME49] gi|221507167|gb|EEE32771.1| helicase, putative [Toxoplasma gondii VEG] Length = 1200 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 7/105 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G + N+ +L G GL L +VF + + E Sbjct: 963 GHSQADRTTLWYFRNDPHARVLLCSLLRAGRGLTLTE-ATHVVFLEVPLNHA-----EEE 1016 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT-KSTIQDLL 194 + R + KR V+ I +++++E ++Q + + + + L Sbjct: 1017 QAIGRVYRMAQKRQTHVWRFIVKDSVEERIVQMRQKPRDGLSERL 1061 >gi|146294462|ref|YP_001184886.1| helicase domain-containing protein [Shewanella putrefaciens CN-32] gi|145566152|gb|ABP77087.1| helicase domain protein [Shewanella putrefaciens CN-32] Length = 877 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 64/167 (38%), Gaps = 24/167 (14%) Query: 52 HDEKIKALEV-----IIEKANAAPIIVAYHFNSDLARLQKAF------------PQGRTL 94 HD+K+ +++ I++ + + +++A G + Sbjct: 446 HDDKLSRFMDTLLKQLLKDNPNEKILIFSEYRATQEYIKEAITGQFGEDKVVLLHGGMSH 505 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ I +++ + G G+NLQ + +V + L W+ Q I R+ Sbjct: 506 DERRDVIWQFDNEVQ--FLISTEAGGEGINLQQHCHTMVNYDLPWNPMRLVQRIGRL--- 560 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + G ++ V V + + T+DE ++ + + + A++ + Sbjct: 561 --YRYGQQKKVVVLNVNSPGTVDEQIIALMYQRIEQVVSDMAAVQGD 605 >gi|26351357|dbj|BAC39315.1| unnamed protein product [Mus musculus] Length = 616 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + ++ +V H S L + + ++ Sbjct: 326 VKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQ 385 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL + +VF L+WD + R + G + Sbjct: 386 KDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRIGQCSS 439 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 440 VNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKL 477 >gi|269860391|ref|XP_002649917.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348] gi|220066677|gb|EED44151.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348] Length = 568 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 49/142 (34%), Gaps = 17/142 (11%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLL 112 N +V H + + L+ K ++ + + + Sbjct: 408 MITNNDKFLVFAHHQTMINELENCCQNCNIYYIRIDGRTGKQKRYELVELFQTNTEYQVA 467 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + GL L +VF L+W+ Q +RI + G V +YYLI Sbjct: 468 ILSLTAASTGLTLTA-AKSVVFAELYWNPGTLMQAEDRI-----HRIGQTTPVDIYYLIC 521 Query: 173 QNTIDELVLQRLRTKSTIQDLL 194 + TIDE+V L K I + + Sbjct: 522 KKTIDEIVWPYLLKKLNILEKI 543 >gi|68076769|ref|XP_680304.1| DNA helicase [Plasmodium berghei strain ANKA] gi|56501218|emb|CAH93993.1| DNA helicase, putative [Plasmodium berghei] Length = 1396 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L + G GLNL + + LWW+ IE R + G + V Sbjct: 1283 NESGKVLLCSLKAGGVGLNLT-VSSKVYLMDLWWNPA-----IEDQAFERIHRIGQLKDV 1336 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y + + T++E +LQ ++K + L Sbjct: 1337 NIYKFVLEKTVEERILQIHQSKQYTANQCL 1366 >gi|154338293|ref|XP_001565371.1| helicase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062420|emb|CAM42281.1| putative helicase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1398 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 45/129 (34%), Gaps = 9/129 (6%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFS 136 S + + + ++ P L + G G+ + ++ Sbjct: 981 KSPRPIRYCRLDGSHSAAQRAAMLDNFDRPDGPDLFLLSMKAGGVGITVTA-ATRVILVD 1039 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ + Q + R + G R V+VY L+ T++ + + K + ++ Sbjct: 1040 TSFNPADDQ-----QAIGRAYRYGQTRPVYVYRLMCYPTLEYSIFAQKLAKEWLFKTVVE 1094 Query: 197 --ALKKETI 203 ++K++ + Sbjct: 1095 ESSVKRDGL 1103 >gi|238602372|ref|XP_002395662.1| hypothetical protein MPER_04252 [Moniliophthora perniciosa FA553] gi|215466782|gb|EEB96592.1| hypothetical protein MPER_04252 [Moniliophthora perniciosa FA553] Length = 167 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 20/149 (13%) Query: 70 PIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 +V + + L R + + D+ T ++ +L + Sbjct: 15 KTVVFSQWTTMLDKVEDALEVAGIRYARLDGTMKRDDRTRATEALKHDPGREVLVVTLRA 74 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + +W+ +E V R + G R V LI Q I++ Sbjct: 75 GGVGLNL-NVDQRVYVMDPYWNPA-----VENQAVARILRLGQTRPVTTVKLITQGAIED 128 Query: 179 LVLQRLRTKSTIQDLLLNAL---KKETIH 204 +L+ + K+ + +L L K E I Sbjct: 129 RILEVQKMKTELANLTLGGQNFSKAELIQ 157 >gi|190352249|gb|ACE76520.1| SNF2H-like protein [Sus scrofa] Length = 239 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 63/190 (33%), Gaps = 35/190 (18%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------ 42 +K Y K QRE Y + ++I+ NS + ++ + N + Sbjct: 50 VKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPG 109 Query: 43 --DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR------ 92 + K+ L+ ++ K + +++ L L+ Sbjct: 110 PPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRL 169 Query: 93 ----TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 D+ +I +NE + + G G+NL ++++ + W+ + Q Sbjct: 170 DGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINL-ATADVVILYDSDWNPQVDLQ 228 Query: 147 MIERIGVTRQ 156 ++R Q Sbjct: 229 AMDRAHRIGQ 238 >gi|170079584|ref|YP_001736217.1| DEAD/H helicase [Synechococcus sp. PCC 7002] gi|169887253|gb|ACB00962.1| DEAD/H helicase [Synechococcus sp. PCC 7002] Length = 1111 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +E+ +G+I +L S GLNLQ G +L+ + + W+ +Q I RI Sbjct: 859 KERIKREFRQGEIKILLCT-ESASEGLNLQTCG-VLINYDMPWNPMRVEQRIGRID---- 912 Query: 157 RQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G V ++ T++ V QRLR + ++ +L+ Sbjct: 913 -RIGQTFPRVIIHNFYYDGTVEARVYQRLRDRIHAFSSVVGSLQ 955 >gi|149058725|gb|EDM09882.1| rCG46237 [Rattus norvegicus] Length = 716 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + ++ +V H S L + + ++ Sbjct: 326 VKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKARYIRIDGSVPSSERIHLVNQFQ 385 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL + +VF L+WD + R + G + Sbjct: 386 KDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELFWDPGHI-----KQAEDRAHRIGQCSS 439 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 440 VNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKL 477 >gi|148707811|gb|EDL39758.1| mCG13937, isoform CRA_b [Mus musculus] Length = 1097 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + ++ +V H S L + + ++ Sbjct: 354 VKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQ 413 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL + +VF L+WD + R + G + Sbjct: 414 KDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRIGQCSS 467 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 468 VNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKL 505 >gi|26350683|dbj|BAC38978.1| unnamed protein product [Mus musculus] Length = 1069 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + ++ +V H S L + + ++ Sbjct: 326 VKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQ 385 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL + +VF L+WD + R + + Sbjct: 386 KDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRIRQCSS 439 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 440 VNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKL 477 >gi|297739847|emb|CBI30029.3| unnamed protein product [Vitis vinifera] Length = 1695 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 40/172 (23%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 ++T++ +Q G + + + K + +I + V F + Sbjct: 798 TETLRLIQFDCGKLQ----ELAVLLRKLKSEGHRALIFTQMTKMLDVLEAFINLYGYTYM 853 Query: 87 AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++ +Q +N KI + S Sbjct: 854 RLDGSTQPEERQTLMQRFNTNPKIFIFILSTRS--------------------------- 886 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G R V +Y LI+++TI+E +L++ K + DL++ + Sbjct: 887 --------DRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQS 930 >gi|221487370|gb|EEE25602.1| hypothetical protein TGGT1_086760 [Toxoplasma gondii GT1] Length = 1213 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 7/105 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G + N+ +L G GL L +VF + + E Sbjct: 975 GHSQADRTTLWYFRNDPHARVLLCSLLRAGRGLTLTE-ATHVVFLEVPLNHA-----EEE 1028 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT-KSTIQDLL 194 + R + KR V+ I +++++E ++Q + + + + L Sbjct: 1029 QAIGRVYRMAQKRQTHVWRFIVKDSVEERIVQMRQKPRDGLSERL 1073 >gi|326923079|ref|XP_003207769.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger Ran-binding domain-containing protein 3-like [Meleagris gallopavo] Length = 1262 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + + +V H S L + + ++ Sbjct: 493 VKDYIRMMLENDKLKFLVFAHHLSMLQACAEAVIENKVRYIRIDGSVPSAERIHLVNQFQ 552 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL +VF L+WD + R + G + Sbjct: 553 KDPDTRVAILSIQAAGQGLTFTA-ATHVVFAELYWDPGHI-----KQAEDRAHRIGQCSS 606 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V +++LIA+ T+D L+ L K+ + LN K+ Sbjct: 607 VNIHFLIAKGTLDPLMWAMLNRKAKVTGSTLNGKKERM 644 >gi|239977150|sp|B6EU02|JBP2_LEITA RecName: Full=Bifunctional helicase and thymine dioxygenase JBP2; AltName: Full=J-binding protein 2; Short=LtJBP2; Includes: RecName: Full=Probable DNA helicase JBP2; Includes: RecName: Full=Thymine dioxygenase JBP2 gi|209407460|emb|CAR82639.1| J-binding protein 2 [Leishmania tarentolae] Length = 1098 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 20/138 (14%), Positives = 47/138 (34%), Gaps = 7/138 (5%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +I + ++ + + + + + +L Sbjct: 912 LIIFSLYVGSQDLIHRTLTALRVCTFTVRGRDSQDRRRRAMQEFSENKDLIVLVLSTKIA 971 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +GL+ N +V F WW+ + ++ + R + ++ V VY LI+ T ++ Sbjct: 972 AYGLDFTA-ANHVVLFDSWWNPQ-----VDAQAIARAYRRNQRKPVTVYRLISA-TENKF 1024 Query: 180 VLQRLRTKSTIQDLLLNA 197 VL K + +L+ Sbjct: 1025 VLSSQTRKIALFKCILHE 1042 >gi|257484420|ref|ZP_05638461.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 54 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 5/59 (8%) Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ E R + G + VFVY +IA+ T++E + + R KS + + Sbjct: 1 DPWWNPAA-----ENQATDRAYRIGQDKPVFVYKMIARGTVEEKIQRLQREKSALAAGV 54 >gi|109730809|gb|AAI17923.1| Zinc finger, RAN-binding domain containing 3 [Mus musculus] gi|109731403|gb|AAI17922.1| Zranb3 protein [Mus musculus] Length = 1069 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + ++ +V H S L + + ++ Sbjct: 326 VKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQ 385 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL + +VF L+WD + R + G + Sbjct: 386 KDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRIGQCSS 439 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 440 VNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKL 477 >gi|302906966|ref|XP_003049543.1| hypothetical protein NECHADRAFT_74036 [Nectria haematococca mpVI 77-13-4] gi|256730479|gb|EEU43830.1| hypothetical protein NECHADRAFT_74036 [Nectria haematococca mpVI 77-13-4] Length = 1043 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 18/156 (11%), Positives = 41/156 (26%), Gaps = 33/156 (21%) Query: 68 AAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHP 116 +V + L F + I+ + + + + Sbjct: 871 GVKSVVFTSWRMTLDLVAIGLDQARIRYVRFDGNVPQKQRSSVIETFKKDPSVTVFLLTL 930 Query: 117 ASCGHGLNL-----------------QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G + W+ E + R + Sbjct: 931 SCGAVGWAFVPCIKRHPTNVCPHRLTLTEASRAFLIEPHWNPTL-----EEQALARVHRL 985 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 G +R V ++T +E VL ++K ++++LL Sbjct: 986 GQQREVTTVRFFVKDTFEERVLDVQKSKKKLEEVLL 1021 >gi|118401967|ref|XP_001033303.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89287651|gb|EAR85640.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1040 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 13/181 (7%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS 79 I+ N K ++ Q++ K +K K+L + A ++ A Sbjct: 858 IDTLNLLEKHLQKKQIS------FMRFEGKLTKSQKQKSLYHFENQTTNADLLQASTLKE 911 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D ++ ++ Q D QE +L A S GLNL G N L+ WW Sbjct: 912 DSSQQEQTMGQEEQYDNSNQN-QENTSQTPTVLLASLMSGYVGLNLT-GANNLILCDSWW 969 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +E + R + G ++ ++Y +I ++TI+E + Q K I + N+ + Sbjct: 970 NPA-----VEDQAINRIHRLGQQKQTYIYKMICKDTIEEKIQQINDQKRDIFQTIFNSSE 1024 Query: 200 K 200 + Sbjct: 1025 Q 1025 >gi|297693490|ref|XP_002824051.1| PREDICTED: e1A-binding protein p400-like [Pongo abelii] Length = 3025 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 1740 HAAPYFQQLRQTTVPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 1799 Query: 82 ARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G+NL + Sbjct: 1800 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINL-VEAD 1858 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + +++ + G + + +Y L++ N+I+E +L+ Sbjct: 1859 TVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 1905 >gi|124430705|ref|NP_081954.1| zinc finger Ran-binding domain-containing protein 3 [Mus musculus] gi|81885066|sp|Q6NZP1|ZRAB3_MOUSE RecName: Full=Zinc finger Ran-binding domain-containing protein 3 gi|42406402|gb|AAH66035.1| Zinc finger, RAN-binding domain containing 3 [Mus musculus] Length = 1069 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + ++ +V H S L + + ++ Sbjct: 326 VKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQ 385 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL + +VF L+WD + R + G + Sbjct: 386 KDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRIGQCSS 439 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 440 VNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKL 477 >gi|291295620|ref|YP_003507018.1| helicase domain-containing protein [Meiothermus ruber DSM 1279] gi|290470579|gb|ADD27998.1| helicase domain protein [Meiothermus ruber DSM 1279] Length = 940 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 31/210 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 ++Y + + G + A A++ + +LA E + D K++ Sbjct: 428 EEYDQ----EFDLTPGGEVSAE--AAEQRRLRELA------REAEALAGAKDRKLQRAIE 475 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR-------------TLDKDPCTIQEWNE 106 +++ A IV F + Q + + ++ + Sbjct: 476 LVKDLLAEGHHPIVFCRFIQTAEYVAGHLRQALGAGVAVEAVTGLLSPPEREQAVERLGQ 535 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L A G+NLQ + ++ + L W+ H+Q R+ Q + K Sbjct: 536 QPVRVLVAT-DCLSEGINLQQYFSAVLHYDLSWNPTRHEQREGRVDRYGQPRRQVK---T 591 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + Y A N +D +VL+ L K L Sbjct: 592 LTYFGANNPVDGIVLEVLLRKHKAIRSALG 621 >gi|297818740|ref|XP_002877253.1| hypothetical protein ARALYDRAFT_484766 [Arabidopsis lyrata subsp. lyrata] gi|297323091|gb|EFH53512.1| hypothetical protein ARALYDRAFT_484766 [Arabidopsis lyrata subsp. lyrata] Length = 1254 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 8/160 (5%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 V + ++ V EKI I + F R L + Sbjct: 1057 VMFVLNLVFRVVKREKILIFCHNIAPIRLFLELFENVFRWQRGRELLTLTGDLELFERGR 1116 Query: 100 TIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++ E G+ +L A +C G++L + ++ W+ + + + R Sbjct: 1117 VIDKFEEPGGQSRVLLASITACAEGISLTA-ASRVIMLDSEWNPSKT-----KQAIARAF 1170 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V+VY L+++ T++E +R K + ++ + Sbjct: 1171 RPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFSE 1210 >gi|224056086|ref|XP_002194081.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Taeniopygia guttata] Length = 1026 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 22/182 (12%) Query: 37 NGAVYYDE--EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR----------- 83 + + +KE K A++ I+ + F L+ Sbjct: 303 SHFSQVMNLITRMYKETAIAKAGAVKDYIKMMLDNDKLKFLVFAHHLSMLQACTEAVIES 362 Query: 84 --LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + ++ + + + + G GL +VF L+WD Sbjct: 363 KARYIRIDGSVPSAERIHLVNQFQKDPETRVAILSIQAAGQGLTFTA-ATHVVFAELYWD 421 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G +V +++LIA+ T+D L+ L K+ + LN K+ Sbjct: 422 PGHI-----KQAEDRAHRIGQCSSVNIHFLIAKGTMDTLMWAMLNRKAKVTGSTLNGKKE 476 Query: 201 ET 202 + Sbjct: 477 KM 478 >gi|303389620|ref|XP_003073042.1| Snf2/Rad54-like helicase [Encephalitozoon intestinalis ATCC 50506] gi|303302186|gb|ADM11682.1| Snf2/Rad54-like helicase [Encephalitozoon intestinalis ATCC 50506] Length = 556 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 7/157 (4%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 AV ++ + + K ++ II + + F + Sbjct: 378 AVKLKIDQVKQYISTIVEKDMKFIIFCHHVEMMDGLEEFLREKGVSIIRIDGSTPSSNRH 437 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + +I +C GL L G +VF L+W+ Q +RI Sbjct: 438 MLVKSFQENEEIKTALLSITACSTGLTLTA-GRAVVFAELYWNPGVLLQAEDRI-----H 491 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G K +V + YL+A+ TIDE V +L +K + + L Sbjct: 492 RIGQKNSVDIIYLVARGTIDEYVWPKLLSKLNVLESL 528 >gi|307105253|gb|EFN53503.1| hypothetical protein CHLNCDRAFT_136836 [Chlorella variabilis] Length = 445 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 40/109 (36%), Gaps = 7/109 (6%) Query: 94 LDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + + + + G G+ L +VF L+W+ + Sbjct: 212 NERRKAAVDTFQRDRACRAALLSITAAGTGITLTE-AQAVVFVELYWNPGQLV-----QA 265 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G +R + V+YL+A T D+ + + + K + + E Sbjct: 266 EDRAHRLGQRRVLEVHYLVAPGTADDTIWRLCQHKLGVVGGAMGEEDAE 314 >gi|148707810|gb|EDL39757.1| mCG13937, isoform CRA_a [Mus musculus] Length = 1073 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + ++ +V H S L + + ++ Sbjct: 330 VKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQ 389 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL + +VF L+WD + R + G + Sbjct: 390 KDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRIGQCSS 443 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 444 VNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKL 481 >gi|290976679|ref|XP_002671067.1| DEXH-box helicase [Naegleria gruberi] gi|284084632|gb|EFC38323.1| DEXH-box helicase [Naegleria gruberi] Length = 1385 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 40/119 (33%), Gaps = 7/119 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 ++ + + G + + G G + + ++F L+ Sbjct: 702 MRGDYYIRIDGSTDSNRRQNLVNTFRTNGHCRVAILSIKAAGVGYTMT-PCSTVLFAELY 760 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W + R R + G AV + YL+ ++T DE + L+ K + ++ Sbjct: 761 WTPSDL-----RQAEDRVHRMGQTNAVSIKYLLGKDTFDEYLWPLLQKKLEVVGKSVDG 814 >gi|294874590|ref|XP_002767014.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] gi|239868417|gb|EEQ99731.1| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] Length = 417 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 27/192 (14%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK------EVHDEKIK----ALEVIIE 64 G++ + N + +L + + K KI+ +E + + Sbjct: 232 FDGDDEDDGNLVACMSGLRELQSDPRLPRKHSILKRAPIANFESSSKIEALVAEVEAMRK 291 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIPLLF 113 A +V F S L Q + + + PLL Sbjct: 292 ADGEAKGLVFSSFVSLLELCQYRLHKAGITTLILHGELPLPLRAKVMKTFSSADTCPLLL 351 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 S G GLNLQ N + WW+ Q R + G + V V ++ Sbjct: 352 ISLMSGGEGLNLQ-VANHVFLLDPWWNPAVEQ-----QATQRAHRLGQSKRVQVLKMLTH 405 Query: 174 NTIDELVLQRLR 185 +TI++ ++ R Sbjct: 406 DTIEDRIVALQR 417 >gi|221052999|ref|XP_002257874.1| DNA helicase [Plasmodium knowlesi strain H] gi|193807706|emb|CAQ38410.1| DNA helicase, putative [Plasmodium knowlesi strain H] Length = 1578 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + S GLNLQ + ++ F ++ + + + R + G K V Sbjct: 1126 NDEAMIFMLSTRSGSLGLNLQS-ADTVIIFDSDFNPHQ-----DIQAMCRCHRIGQKNIV 1179 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V+ I + ++EL+ QR + K TI D ++ A Sbjct: 1180 KVFRFITLSGVEELIFQRAQDKLTINDKVIQA 1211 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 11/121 (9%), Positives = 38/121 (31%), Gaps = 16/121 (13%) Query: 3 QYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---VHDEKIKA 58 Y + + + + + +I + + ++ ++ N + +E + + K + Sbjct: 896 LYRQIEMKGFMQINRNGSITNKSCQNVIMELRKVVNHPYLFLQEYNIDDFLVKCSGKFEV 955 Query: 59 LEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQEWNE 106 L+ ++ K I++ + L + I+++N Sbjct: 956 LDRMLPKLLRFRHKILIFSQMTKLMDILCDYLDYRGYRFHRLDGNIGLQERRKIIEQFNR 1015 Query: 107 G 107 Sbjct: 1016 D 1016 >gi|225432202|ref|XP_002269671.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297736823|emb|CBI26024.3| unnamed protein product [Vitis vinifera] Length = 677 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 52/157 (33%), Gaps = 19/157 (12%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCT 100 KI A+ + ++ H + + + + + Sbjct: 481 AKIPAVLDYLGTVVEAGCKFLIFAHHQPMIDSIFQFLVKKKVGCIRIDGSTPSSSRQAFV 540 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + I + G GL L + ++F L W + R + G Sbjct: 541 TDFQEKDTIKAAVLSIKAGGVGLTLTA-ASTVIFAELSWTPGDLI-----QAEDRVHRIG 594 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +V ++YL+A +T+D+++ +++K +L+ Sbjct: 595 QVSSVNIHYLLANDTVDDIIWDVVQSKLENLGQMLDG 631 >gi|190194425|ref|NP_775089.1| E1A-binding protein p400 isoform 2 [Mus musculus] Length = 2999 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 25/193 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y R L L+ + E + K++AL ++ Sbjct: 1696 LYSSRLRALRQCLREHTGPYHRQLQQLTALR------SLQFPELRLVQFDSGKLEALAIL 1749 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKI 109 ++K + +++ L L+ + ++ +N + +I Sbjct: 1750 LQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRI 1809 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G+NL + +VF+ + +++ + G + + +Y Sbjct: 1810 FCALLSTHSRATGINL-VEADTVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYR 1863 Query: 170 LIAQNTIDELVLQ 182 L++ N+I+E +L+ Sbjct: 1864 LVSGNSIEEKLLK 1876 >gi|153945880|ref|NP_083613.2| E1A-binding protein p400 isoform 1 [Mus musculus] Length = 3035 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 25/193 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y R L L+ + E + K++AL ++ Sbjct: 1732 LYSSRLRALRQCLREHTGPYHRQLQQLTALR------SLQFPELRLVQFDSGKLEALAIL 1785 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKI 109 ++K + +++ L L+ + ++ +N + +I Sbjct: 1786 LQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRI 1845 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G+NL + +VF+ + +++ + G + + +Y Sbjct: 1846 FCALLSTHSRATGINL-VEADTVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYR 1899 Query: 170 LIAQNTIDELVLQ 182 L++ N+I+E +L+ Sbjct: 1900 LVSGNSIEEKLLK 1912 >gi|157821357|ref|NP_001100619.1| E1A binding protein p400 [Rattus norvegicus] gi|149063710|gb|EDM14033.1| E1A binding protein p400, isoform CRA_a [Rattus norvegicus] Length = 3034 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 25/193 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y R L L+ + E + K++AL ++ Sbjct: 1734 LYSSRLRALRQCLREHTGPYHRQLQQLTALR------SLQFPELRLVQFDSGKLEALAIL 1787 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKI 109 ++K + +++ L L+ + ++ +N + +I Sbjct: 1788 LQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRI 1847 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G+NL + +VF+ + +++ + G + + +Y Sbjct: 1848 FCALLSTHSRATGINL-VEADTVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYR 1901 Query: 170 LIAQNTIDELVLQ 182 L++ N+I+E +L+ Sbjct: 1902 LVSGNSIEEKLLK 1914 >gi|148688062|gb|EDL20009.1| E1A binding protein p400, isoform CRA_c [Mus musculus] Length = 3004 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 25/193 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y R L L+ + E + K++AL ++ Sbjct: 1701 LYSSRLRALRQCLREHTGPYHRQLQQLTALR------SLQFPELRLVQFDSGKLEALAIL 1754 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKI 109 ++K + +++ L L+ + ++ +N + +I Sbjct: 1755 LQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRI 1814 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G+NL + +VF+ + +++ + G + + +Y Sbjct: 1815 FCALLSTHSRATGINL-VEADTVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYR 1868 Query: 170 LIAQNTIDELVLQ 182 L++ N+I+E +L+ Sbjct: 1869 LVSGNSIEEKLLK 1881 >gi|148688060|gb|EDL20007.1| E1A binding protein p400, isoform CRA_a [Mus musculus] Length = 3035 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 25/193 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y R L L+ + E + K++AL ++ Sbjct: 1732 LYSSRLRALRQCLREHTGPYHRQLQQLTALR------SLQFPELRLVQFDSGKLEALAIL 1785 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKI 109 ++K + +++ L L+ + ++ +N + +I Sbjct: 1786 LQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRI 1845 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G+NL + +VF+ + +++ + G + + +Y Sbjct: 1846 FCALLSTHSRATGINL-VEADTVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYR 1899 Query: 170 LIAQNTIDELVLQ 182 L++ N+I+E +L+ Sbjct: 1900 LVSGNSIEEKLLK 1912 >gi|154334093|ref|XP_001562198.1| j-binding protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|239977156|sp|A4H7G5|JBP2_LEIBR RecName: Full=Bifunctional helicase and thymine dioxygenase JBP2; AltName: Full=J-binding protein 2; Includes: RecName: Full=Probable DNA helicase JBP2; Includes: RecName: Full=Thymine dioxygenase JBP2 gi|134060314|emb|CAM37473.1| putative j-binding protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1098 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 59/180 (32%), Gaps = 22/180 (12%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHF---------- 77 ++ Q A + +E+ K++ L I+ + +I+ + Sbjct: 871 MRLEQYA--QMIENEQLDAFINVSGKMRVLVDIVLRVQARKEKLIIFSLYVGSQDLIHRT 928 Query: 78 -NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + + + + +L +GL N +V F Sbjct: 929 LTALRVCTFTVRGRDSQDRRRRAMHEFSENKDLTVLVLSTKIAAYGLEFTA-ANHVVLFD 987 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ + + + R + ++ V VY LI+ T ++ VL+ K + + + Sbjct: 988 SWWNPQA-----DAQAIARAYRRNQRKPVTVYRLISA-TENKFVLRSQTRKIALFKCIFH 1041 >gi|55976523|sp|Q8CHI8|EP400_MOUSE RecName: Full=E1A-binding protein p400; AltName: Full=Domino homolog; Short=mDomino; AltName: Full=p400 kDa SWI2/SNF2-related protein Length = 3072 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 25/193 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y R L L+ + E + K++AL ++ Sbjct: 1769 LYSSRLRALRQCLREHTGPYHRQLQQLTALR------SLQFPELRLVQFDSGKLEALAIL 1822 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKI 109 ++K + +++ L L+ + ++ +N + +I Sbjct: 1823 LQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRI 1882 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G+NL + +VF+ + +++ + G + + +Y Sbjct: 1883 FCALLSTHSRATGINL-VEADTVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYR 1936 Query: 170 LIAQNTIDELVLQ 182 L++ N+I+E +L+ Sbjct: 1937 LVSGNSIEEKLLK 1949 >gi|27348239|dbj|BAC45254.1| mDomino-S [Mus musculus] Length = 2999 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 25/193 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y R L L+ + E + K++AL ++ Sbjct: 1696 LYSSRLRALRQCLREHTGPYHRQLQQLTALR------SLQFPELRLVQFDSGKLEALAIL 1749 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKI 109 ++K + +++ L L+ + ++ +N + +I Sbjct: 1750 LQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRI 1809 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G+NL + +VF+ + +++ + G + + +Y Sbjct: 1810 FCALLSTHSRATGINL-VEADTVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYR 1863 Query: 170 LIAQNTIDELVLQ 182 L++ N+I+E +L+ Sbjct: 1864 LVSGNSIEEKLLK 1876 >gi|27348237|dbj|BAC45253.1| mDomino [Mus musculus] Length = 3035 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 25/193 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y R L L+ + E + K++AL ++ Sbjct: 1732 LYSSRLRALRQCLREHTGPYHRQLQQLTALR------SLQFPELRLVQFDSGKLEALAIL 1785 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKI 109 ++K + +++ L L+ + ++ +N + +I Sbjct: 1786 LQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRI 1845 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G+NL + +VF+ + +++ + G + + +Y Sbjct: 1846 FCALLSTHSRATGINL-VEADTVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYR 1899 Query: 170 LIAQNTIDELVLQ 182 L++ N+I+E +L+ Sbjct: 1900 LVSGNSIEEKLLK 1912 >gi|152986239|ref|YP_001351355.1| SNF2 family DNA/RNA helicase [Pseudomonas aeruginosa PA7] gi|150961397|gb|ABR83422.1| superfamily II DNA/RNA helicase, SNF2 family [Pseudomonas aeruginosa PA7] Length = 1010 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 27/240 (11%), Positives = 66/240 (27%), Gaps = 41/240 (17%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE---------V 51 ++ Y + + + + ++ +E + E + Sbjct: 772 LQAYDEVLDSYRARRASAEDMRGTALAALTQLRSISLHPRLENESALYCEDGKHARQLMM 831 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------------- 92 K+ L ++++ + +I+ L+ Q Sbjct: 832 ESGKLAVLLQLLDEIRSKGEKVILFMMTKRLQRVLKLWLDQIYDLNVAVINGDTQAVATR 891 Query: 93 -TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 I E+ + G N +V W+ + E Sbjct: 892 AEDMTRKKLIAEFEAKSGFNILIMSPVAAGVGLTVIGANHVVHLERHWNPAK-----EAQ 946 Query: 152 GVTRQRQAGFKRAVFVYYLIAQ----NTIDELVLQRLRTKSTIQDLLL--NAL-KKETIH 204 R + G + VF++ ++ D + + LR K ++D ++ A+ + E I Sbjct: 947 ASDRVYRIGQTKPVFIHLPAVTHPQFDSFDVHLDRLLRGKLMLKDAVVTPEAVSESEMIQ 1006 >gi|255715185|ref|XP_002553874.1| KLTH0E09174p [Lachancea thermotolerans] gi|238935256|emb|CAR23437.1| KLTH0E09174p [Lachancea thermotolerans] Length = 1148 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 7/83 (8%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL + WW Q I+RI + G V V I +++I+E Sbjct: 1059 GGVGLNLT-CASRAYMMDPWWSPSLEDQAIDRI-----HRIGQVNDVKVVRFIMEHSIEE 1112 Query: 179 LVLQRLRTKSTIQDLLLNALKKE 201 +L+ K T+ + + +A + E Sbjct: 1113 KMLRIQERKRTLGEAV-DADEDE 1134 >gi|327260656|ref|XP_003215150.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Anolis carolinensis] Length = 1095 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 60/202 (29%), Gaps = 30/202 (14%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 DL + + K +K ++ + + +V Sbjct: 294 DLDSTESDFVQVMGLITR------------MFKQTAIAKAGAVKDYIKMLLENDNLKFLV 341 Query: 74 AYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 H S L + + ++ + + + G G Sbjct: 342 FAHHLSMLQACTEAVIENKTRYIRIDGSVASSERINLVNQFQKDPDTRVAILSIQAAGQG 401 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 L +VF L+WD + R + G +V ++YLIA T+D L+ Sbjct: 402 LTFTA-ATHVVFAELYWDPGHI-----KQAEDRAHRIGQCSSVNIHYLIANGTMDPLMWA 455 Query: 183 RLRTKSTIQDLLLNALKKETIH 204 L K+ + LN KKE + Sbjct: 456 MLNRKARVTGTTLNG-KKEKLQ 476 >gi|330794038|ref|XP_003285088.1| hypothetical protein DICPUDRAFT_148935 [Dictyostelium purpureum] gi|325085011|gb|EGC38427.1| hypothetical protein DICPUDRAFT_148935 [Dictyostelium purpureum] Length = 232 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 54/164 (32%), Gaps = 34/164 (20%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 +Y D + L ++++ + ++ + S L + Sbjct: 90 PIYDSSNWKCSTKIDSLLDELNIVLKNEPDSKCLIFSQWTSMLDLI-------------- 135 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 IPL + + WW+ +Q I+R+ + Sbjct: 136 ---------DIPLNINSMPWWIG-----FKFSCCFTCDPWWNPATEEQAIDRV-----YR 176 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G + V V + +++I+E +L+ ++K + L +KK+ Sbjct: 177 IGQNKNVNVIRFLIKDSIEEKILELQKSKKDLAKEAL-TMKKQP 219 >gi|320170024|gb|EFW46923.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864] Length = 2080 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 43/151 (28%), Gaps = 11/151 (7%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR-----LQKAFPQGRT 93 ++ D I+ L + + +V + L+R + Sbjct: 1904 HASIPLARNSSTKIDALIRYLIELERQNPGTKSVVFSQWGHVLSRVGEALQLQGIGFTTI 1963 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + K+ + H GL L + + +E + Sbjct: 1964 QTGKDAASLFHSNPKVTVFLLHSRHKSSGLTLVA-ATHVFLMDPIINPA-----VELQAI 2017 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 R + G V+ I +NTI++ VL+ Sbjct: 2018 NRVHRIGQTAETHVHRFIVENTIEQQVLRLA 2048 >gi|302852236|ref|XP_002957639.1| hypothetical protein VOLCADRAFT_98711 [Volvox carteri f. nagariensis] gi|300257051|gb|EFJ41305.1| hypothetical protein VOLCADRAFT_98711 [Volvox carteri f. nagariensis] Length = 1172 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 10/141 (7%) Query: 60 EVIIEKANAAPIIVA-YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE---GKIPLLFAH 115 + I+ A+ ++ D+ ++E+ + Sbjct: 569 DKILVFAHHQTVLDTLEAHVKQRKVRYIRIDGSVPPDRREVAVREFQASDPHSPRVALLA 628 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GL L +++VF L R + G V VYYL+ T Sbjct: 629 LRAAGAGLTLTA-ASVVVFAELDQTPALL-----AQAEDRAHRVGQGSHVHVYYLLGSGT 682 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 +DE + + L TK + L+ Sbjct: 683 LDERIWRMLETKKFVMGAALD 703 >gi|83315696|ref|XP_730904.1| DNA repair protein [Plasmodium yoelii yoelii str. 17XNL] gi|23490775|gb|EAA22469.1| DNA repair protein-like-related [Plasmodium yoelii yoelii] Length = 1412 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L + G GLNL + + LWW+ IE R + G + V Sbjct: 1298 NKSGKVLLCSLKAGGVGLNLT-VSSKVYLMDLWWNPA-----IEDQAFERIHRIGQLKDV 1351 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y + + T++E +LQ ++K + L Sbjct: 1352 NIYKFVLEKTVEERILQIHQSKQYTANQCL 1381 >gi|315645021|ref|ZP_07898147.1| SNF2-related protein [Paenibacillus vortex V453] gi|315279442|gb|EFU42747.1| SNF2-related protein [Paenibacillus vortex V453] Length = 94 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N ++ + WW+ +E R + G R V V+ LI+Q T++E + + + Sbjct: 3 LTRANHVLHYDRWWNPA-----VENQATDRVFRIGQHRNVQVHKLISQGTLEERIDELIE 57 Query: 186 TKSTIQDLLLNALK 199 K + + ++ + + Sbjct: 58 QKKALSEQVVGSGE 71 >gi|291000680|ref|XP_002682907.1| predicted protein [Naegleria gruberi] gi|284096535|gb|EFC50163.1| predicted protein [Naegleria gruberi] Length = 651 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 64/167 (38%), Gaps = 20/167 (11%) Query: 52 HDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPC 99 K+ L+ ++EK +++ + + L + F T + Sbjct: 173 SSSKLIVLDYLLEKHYGEGNKVVIFSQYTTTLDFLEYYLMLKEYKYQRFDGSNTKSERTE 232 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + + + G GLNL N+++ + + W+ + R Sbjct: 233 AVESFQHENSQDFVFLLSTKAGGVGLNL-ISANVVIEYDITWNP-----HADEQATNRCH 286 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G + V+VY + Q +I++LVL+ + K + + + + + +I Sbjct: 287 RIGQTKTVYVYKFLIQKSIEDLVLKYTQEKLAMSTRVNSNVNQNSID 333 >gi|323704524|ref|ZP_08116102.1| helicase domain protein [Thermoanaerobacterium xylanolyticum LX-11] gi|323535986|gb|EGB25759.1| helicase domain protein [Thermoanaerobacterium xylanolyticum LX-11] Length = 893 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 17/135 (12%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 F + ++++ I E+ + + + G GLNLQ+ NI++ + Sbjct: 491 FLQEKGYSVAILNGTMSIEERNNAIDEFKKSAD--ILVSTDAGGEGLNLQF-CNIMINYD 547 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI------ 190 L W+ + +Q I RI + G KR V V + +TI+ V Q L K I Sbjct: 548 LPWNPMKIEQRIGRID-----RIGQKRDVVVINYVLSDTIEFRVRQVLEEKLKIIFEQFG 602 Query: 191 ---QDLLLNALKKET 202 +L++++ E Sbjct: 603 VDKMQDILDSVQSEM 617 >gi|302759176|ref|XP_002963011.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii] gi|300169872|gb|EFJ36474.1| hypothetical protein SELMODRAFT_438275 [Selaginella moellendorffii] Length = 2074 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 13/128 (10%) Query: 70 PIIVAYHFNSDLARLQK----AFPQGRTLDKDPCT---IQEWNEGKIPLLFAHPASCGHG 122 I+V + L L+ L + I E+ + I ++ +G Sbjct: 1111 KILVFSTWQEVLDLLEHALKSNKLSWVRLKQRRQMGSSILEFKKENIQVMLLPIQHGANG 1170 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 LNL ++ + +E + R + G + V+ I +NT++E + + Sbjct: 1171 LNL-IEAQHVILVEPLLNPA-----VEAQAINRVHRIGQRLKTLVHRFIIRNTVEENIYK 1224 Query: 183 RLRTKSTI 190 + K+ + Sbjct: 1225 MSQQKTNL 1232 >gi|255559547|ref|XP_002520793.1| ATP-dependent helicase, putative [Ricinus communis] gi|223539924|gb|EEF41502.1| ATP-dependent helicase, putative [Ricinus communis] Length = 1246 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 58/160 (36%), Gaps = 8/160 (5%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 V + ++ V EK+ I N + F R L + Sbjct: 1050 VMFVLNLVYRIVKKEKVLIFCHNIAPINIFVELFENVFRWQRGREIMVLTGDLELFERGR 1109 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ E +L A +C G++L + ++ W+ + + + R Sbjct: 1110 VMDKFEEPGSPSRVLLASITACAEGISLTA-ASRVILLDSEWNPSKT-----KQAIARAF 1163 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V+VY L+A T++E R K + ++ + Sbjct: 1164 RPGQQKVVYVYQLLATGTLEEDKYSRTTWKEWVSSMIFSE 1203 >gi|83310005|ref|YP_420269.1| superfamily II DNA/RNA helicase [Magnetospirillum magneticum AMB-1] gi|82944846|dbj|BAE49710.1| Superfamily II DNA/RNA helicase [Magnetospirillum magneticum AMB-1] Length = 760 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 50/147 (34%), Gaps = 13/147 (8%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-------KDPCTIQEWNEGK 108 + +E + + +I+ H +LQ AF +D + EG Sbjct: 551 VTWVEHFLVSKPSEKLIIFAHHIEVQQQLQVAFSDALVIDGKTSATARRKAVKAFQAEGG 610 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L+ + L L ++F L W + R + G V + Sbjct: 611 PRLIICSLRAAQTALTLTR-ARHVLFVELDWTPSGIE-----QAADRAHRIGQDGQVEIT 664 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLL 195 ++A ++D+ +L+ + K I ++ Sbjct: 665 LMVAPGSLDDRMLEVITRKRVIIRSVM 691 >gi|154339395|ref|XP_001562389.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062972|emb|CAM39420.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1878 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 23/145 (15%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ +E I ++V + + L +L + ++ Sbjct: 1683 LEVVEEIWRTQPDDGVLVFSKYPAFLQLAYDAVAARGYAPHMVCGASSLAQRQRAMRAMQ 1742 Query: 106 EGKI-------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +LF S GLNL + N +VF + IE V R + Sbjct: 1743 SSSGDSALSQRRILFVTSRSANAGLNLTF-ANHVVFLEPNLNPA-----IEHQAVGRVHR 1796 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQR 183 G + V V+++ A +TI+E++ +R Sbjct: 1797 FGQLKQVIVHHIFAPHTIEEVIYRR 1821 >gi|322499968|emb|CBZ35042.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1873 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 23/145 (15%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ +E I ++V + + L +L + ++ Sbjct: 1677 LEVVEEIWRTQPDDGVLVFSKYPAFLKLAHDAVAAQGYAPHMVCGASSLAQRQRAMRAMQ 1736 Query: 106 EGKI-------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +LF S GLNL + N +VF + Q V R + Sbjct: 1737 PPSGASVLSQRRILFVTSRSANAGLNLTF-ANHVVFLEPNLNPAIEQ-----QAVGRVHR 1790 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQR 183 G R V V++ A +TI+E++ +R Sbjct: 1791 FGQLRQVIVHHFFAPHTIEEVIYRR 1815 >gi|289580072|ref|YP_003478538.1| helicase [Natrialba magadii ATCC 43099] gi|289529625|gb|ADD03976.1| helicase domain protein [Natrialba magadii ATCC 43099] Length = 584 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 18/165 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRT 93 E+ + + +E + +IV F + + AF G + Sbjct: 358 EDIDTVTKQERLLDIVEEARDNVEMGRVIVFTQFRATQRQVLDRLASEGYTVHAFHGGHS 417 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++ + E + + G NLQ+ N+LV L W+ +Q I R+ Sbjct: 418 SSEKEKIVKNFEEEGG--ILVSTDAMSEGRNLQF-CNLLVNMDLPWNPMRVEQRIGRV-- 472 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G KR VF++ + ++T++E VL+RL K + + L Sbjct: 473 ---HRIGQKRDVFIFNMALKDTVEEYVLERLYHKIDLFQQSVGEL 514 >gi|223940612|ref|ZP_03632456.1| SNF2-related protein [bacterium Ellin514] gi|223890730|gb|EEF57247.1| SNF2-related protein [bacterium Ellin514] Length = 819 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 8/105 (7%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +E+ LL S G NLQ+ + LV F L W+ E +Q I R+ Sbjct: 658 PAPERHPITEEFRRRGGALLL--THSGTEGRNLQF-SHRLVNFDLPWNPMEIEQRIGRL- 713 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G +R V +Y L+ T+ E +L+ L+ K + ++++ Sbjct: 714 ----HRLGQQRPVHIYNLVYAGTLQEQLLEILQEKLNLFEVVVGE 754 >gi|146089885|ref|XP_001470501.1| hypothetical protein [Leishmania infantum JPCM5] gi|134070534|emb|CAM68877.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 1871 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 23/145 (15%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ +E I ++V + + L +L + ++ Sbjct: 1675 LEVVEEIWRTQPDDGVLVFSKYPAFLKLAHDAVAAQGYAPHMVCGASSLAQRQRAMRAMQ 1734 Query: 106 EGKI-------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +LF S GLNL + N +VF + Q V R + Sbjct: 1735 PPSGASVLSQRRILFVTSRSANAGLNLTF-ANHVVFLEPNLNPAIEQ-----QAVGRVHR 1788 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQR 183 G R V V++ A +TI+E++ +R Sbjct: 1789 FGQLRQVIVHHFFAPHTIEEVIYRR 1813 >gi|26340760|dbj|BAC34042.1| unnamed protein product [Mus musculus] Length = 904 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + ++ +V H S L + + ++ Sbjct: 161 VKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQ 220 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL + +VF L+WD + R + G + Sbjct: 221 KDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRIGQCSS 274 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 275 VNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKL 312 >gi|301299740|ref|ZP_07205990.1| SNF2 family N-terminal domain protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852671|gb|EFK80305.1| SNF2 family N-terminal domain protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 628 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 62/167 (37%), Gaps = 21/167 (12%) Query: 49 KEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDK 96 +++ K +I + ++V F + ++++ Sbjct: 443 EDIETPKFDRGIKLITDLVSEGKKVLVWGMFVGTMHKIKRYLDEKGLNTILVYGETPKQD 502 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+ +G +L ++P + G ++L + V+F ++L Q +RI Sbjct: 503 REELINEFRDGAAQVLISNPNTLGESISLHQTVHDAVYFEYNFNLTFMLQSRDRINRLGL 562 Query: 157 RQAGFKRAVFVYYLIAQN------TIDELVLQRLRTKSTIQDLLLNA 197 + R YYL+++ IDE+V +RL+ K + + Sbjct: 563 PDNQYTR---YYYLMSKGDVAHQSFIDEMVYRRLKEKEQVMMDAIEG 606 >gi|48696694|ref|YP_024988.1| superfamily II DNA/RNA helicase [Vibrio phage VP5] gi|40806157|gb|AAR92075.1| superfamily II DNA/RNA helicase [Vibrio phage VP5] Length = 489 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 76/218 (34%), Gaps = 26/218 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----HDEKIK-A 58 + + + G+ + + + Q+ G + ++ +V + K+ Sbjct: 271 KELKDFFETEQDGDVLTVSTVLDRMTRFQQILGGNFPFLDKDGAYDVKPISGPNPKMDAM 330 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARL------------QKAFPQGRTLDKDPCTIQEWNE 106 LE I + A +I+ F +++ ++ + G + +I + + Sbjct: 331 LEDIADLDRNAKVIIWARFRAEIEQISKRLREVYGDDSVIEYHGGISESDRKASIPRFQD 390 Query: 107 --GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 A+ + G G+ L ++S + LE+ Q +R + G + Sbjct: 391 SSDPSRFFVANQQTAGMGITLT-IATFAYYYSNSFSLEQRLQSEDR-----NHRKGQRNV 444 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + D +V + L++K + L+ L++ Sbjct: 445 CTYIDIWCKADADLMVGRALKSKKDLAVLVDEELQRRI 482 >gi|313768339|ref|YP_004062019.1| hypothetical protein MpV1_136 [Micromonas sp. RCC1109 virus MpV1] gi|312599035|gb|ADQ91059.1| hypothetical protein MpV1_136 [Micromonas sp. RCC1109 virus MpV1] Length = 485 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 69/205 (33%), Gaps = 29/205 (14%) Query: 20 IEAFN--SASKTVKCLQLANGAVYYDEEKHWKE--------VHDEKIKALEVIIEKANAA 69 I A N ++ Q Y + + +K++ L +IE Sbjct: 264 INAKNMIILECLLRARQAMIWPQMYLDGVAKQNETQAEKWVGRSKKMETLFDMIESHPNE 323 Query: 70 PIIVAYHFNSDLARLQKAFPQ-------GRTLDKDPCTIQEWNEGKI-PLLFAHPASCGH 121 ++ F ++ +Q ++ I+ + + + + S G Sbjct: 324 KSLIFCQFRGEMNHIQSQLKCPTFRIDGSVPKEERVKQIEGFKKAQSGAVFIIQIKSGGQ 383 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN-----TI 176 GLNLQ + + W+ + R + G +AV+V LI + ++ Sbjct: 384 GLNLQE-ATRVYITAPSWNPATEL-----QAIGRAHRTGQTKAVYVKKLIYKECPRFVSV 437 Query: 177 DELVLQRLRTKSTIQDLLLNALKKE 201 +E ++ KS + +LN + E Sbjct: 438 EEEMMALQGHKSIVCSKVLNDERIE 462 >gi|154283191|ref|XP_001542391.1| hypothetical protein HCAG_02562 [Ajellomyces capsulatus NAm1] gi|150410571|gb|EDN05959.1| hypothetical protein HCAG_02562 [Ajellomyces capsulatus NAm1] Length = 1128 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G GLNL N + WW Q I+R+ + G + V V I +++I+ Sbjct: 939 GGVGLNLTA-ANQVFMMDPWWSFATEAQAIDRV-----HRMGQLKDVTVTRFIVKDSIEG 992 Query: 179 LVLQRLRTKSTIQDLL 194 +L+ K I L Sbjct: 993 RILRIQERKMMIAGSL 1008 >gi|253699642|ref|YP_003020831.1| SNF2-related protein [Geobacter sp. M21] gi|251774492|gb|ACT17073.1| SNF2-related protein [Geobacter sp. M21] Length = 1248 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 58/227 (25%), Gaps = 38/227 (16%) Query: 2 KQYHKFQRELYC-DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DE 54 + Y + N Q+ + E Sbjct: 865 QLYGQAVANYKAGKSGDPGATKMNHLGLLQYIRQVCTDPRPLGQATSEHESFEVAASRSP 924 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ--------------------GRTL 94 K+ L ++++ A F + Sbjct: 925 KLAWLYGVLKEIQG-KGEKAIVFTELRGLQRMLKIYIAERLGVVPEIINGDTSTATANAQ 983 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + ++ P + G G+N+Q N ++ ++ W+ + E Sbjct: 984 SRQKKIKEYQERPGFGVIILSPLAVGFGVNIQA-ANHVIHYTRMWNPAK-----EDQATD 1037 Query: 155 RQRQAGFKRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLLNA 197 R + G + V+VY + + T D + L K I +LN Sbjct: 1038 RAYRIGQTKDVYVYTPVVVSPEFTTFDAKLDALLEWKRGISADMLNG 1084 >gi|162448815|ref|YP_001611182.1| helicase, putative [Sorangium cellulosum 'So ce 56'] gi|161159397|emb|CAN90702.1| helicase, putative [Sorangium cellulosum 'So ce 56'] Length = 420 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 17/146 (11%) Query: 63 IEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + +A+ ++V F L+ ++ AF G + + + +G+ +L Sbjct: 217 LVRAHDEQVLVFTRFRDTLSTIEAALREAGVEPVAFHGGLSAADKRAALSAFRDGRARVL 276 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G NL + ++LV F L ++ +Q I R+ + G + V VY L A Sbjct: 277 V-STDAGGEGHNLHH-CHVLVNFDLPYNPMLIEQRIGRL-----HRMGQREEVRVYNLCA 329 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 + T +E VL L + + +L++ + Sbjct: 330 RGTAEERVLDLLDRRLHLFELVVGEM 355 >gi|158296666|ref|XP_317019.4| AGAP008426-PA [Anopheles gambiae str. PEST] gi|157014820|gb|EAA12838.4| AGAP008426-PA [Anopheles gambiae str. PEST] Length = 722 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 7/99 (7%) Query: 97 DPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ + +C G+ L ++++F L W+ +R Sbjct: 542 RGALVERFQSKATCRAAVLSLKACNAGITLTA-AHLVLFAELDWNPSTL-----AQAESR 595 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G V V YL+A+ T D+++ L+ K + Sbjct: 596 AHRIGQADNVTVRYLLAKKTADDIIWTMLQRKQETLSRV 634 >gi|224009872|ref|XP_002293894.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970566|gb|EED88903.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 718 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 52/145 (35%), Gaps = 15/145 (10%) Query: 52 HDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQ 102 K++ ++++ ++V H + L +AF + + Sbjct: 354 SSFKLEPSVQLLKQYIMCEKVVVFAHHRQLIMDLVEAFGDSCVHIIGGMDAKSRAEAVQR 413 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 N+ L + G GL L + +VF L W I R + G + Sbjct: 414 FQNDASCRLFIGSIRAAGVGLTLTASSH-VVFLELDWSPS-----IMTQAEDRCHRVGQQ 467 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTK 187 +V V Y + + ++DE + ++L K Sbjct: 468 DSVLVEYFVFKGSLDEWMARQLAEK 492 >gi|261417323|ref|YP_003251006.1| SNF2-related protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373779|gb|ACX76524.1| SNF2-related protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 861 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 53/155 (34%), Gaps = 17/155 (10%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQ 102 K+K ++ I+ + ++V F + ++ I Sbjct: 526 SGKLKRIKEIVRQAKFENRKVLVFSFFLETIKKVCAYLNDSCMEPITGAVPVSHRQEIID 585 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +L + G GLN+Q N+++ ++R + G Sbjct: 586 AFEKSPAGTVLPLQINAGGLGLNIQA-ANVVILCEPQLKPSAEM-----QAISRAYRMGQ 639 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V VY L+ ++IDE + L+ K + + + Sbjct: 640 VRNVLVYRLLMLDSIDEKINTLLKFKKQVFNTFAD 674 >gi|222475692|ref|YP_002564213.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222454063|gb|ACM58327.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 584 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 65/165 (39%), Gaps = 18/165 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRT 93 E+ + + +E E +IV F + + AF G + Sbjct: 358 EDIDTVTKQERLLDIVEEARETVEMGRVIVFTQFRATQRQVLDRLASEGYTVHAFHGGHS 417 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++++ E + + G NLQ+ N+LV L W+ +Q I R+ Sbjct: 418 SSEKEQIVEDFEEEGG--ILVSTDAMSEGRNLQF-CNLLVNLGLSWNPMRMEQRIGRV-- 472 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + G KR VFV+ + + T++E VL+RL K + + L Sbjct: 473 ---HRIGQKRDVFVFNMALKGTVEEYVLERLYHKIDLFQQSVGEL 514 >gi|15241352|ref|NP_197542.1| CHR42 (chromatin remodeling 42); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|332005458|gb|AED92841.1| chromatin remodeling 42 [Arabidopsis thaliana] Length = 1261 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 8/160 (5%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 V + ++ V EKI I + F R L + Sbjct: 1065 VMFVLNLIFRVVKREKILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDLELFERGR 1124 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++ E +L A +C G++L + ++ W+ + + + R Sbjct: 1125 VIDKFEEPGNPSRVLLASITACAEGISLTA-ASRVIMLDSEWNPSKT-----KQAIARAF 1178 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V+VY L+++ T++E +R K + ++ + Sbjct: 1179 RPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSCMIFSE 1218 >gi|147858107|emb|CAN81392.1| hypothetical protein VITISV_043256 [Vitis vinifera] Length = 210 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%) Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + + + R + G V +Y LI + TI+E ++Q + K ++ L++ LK + Sbjct: 52 SDWNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQ 111 Query: 202 TIH 204 I+ Sbjct: 112 NIN 114 >gi|12855912|dbj|BAB30499.1| unnamed protein product [Mus musculus] Length = 530 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + ++ +V H S L + + ++ Sbjct: 330 VKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQ 389 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL + +VF L+WD + R + G + Sbjct: 390 KDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRIGQCSS 443 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 444 VNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKL 481 >gi|37522310|ref|NP_925687.1| hypothetical protein gll2741 [Gloeobacter violaceus PCC 7421] gi|35213310|dbj|BAC90682.1| gll2741 [Gloeobacter violaceus PCC 7421] Length = 1066 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 15/183 (8%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP 70 L L A + + K Q + + +E + E I + A Sbjct: 470 LVEALDNLVHLAGEALEQDPKLDQ----FIQVIQAIRAEEPRANVLVYTEYIDTQQAAVR 525 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 + F L + + T + + +L + GLNL + Sbjct: 526 ALKQAGFRDVLTMSGEDDEKM-----RTGTTERFRSEDGLILV-STDAAAEGLNLHQRCH 579 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+ L ++ +Q RI + G + V YL + T +E +L RL K Sbjct: 580 QLIHLELPFNPNRLEQRNGRID-----RYGQQHDPIVRYLFLRGTFEERILLRLIVKYEK 634 Query: 191 QDL 193 Q Sbjct: 635 QRA 637 >gi|167395605|ref|XP_001741658.1| DNA repair and recombination protein RAD54B [Entamoeba dispar SAW760] gi|165893723|gb|EDR21860.1| DNA repair and recombination protein RAD54B, putative [Entamoeba dispar SAW760] Length = 837 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 52/164 (31%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----------RL 84 + N + +E+ + + + + +++ + L L Sbjct: 436 IDNEIIKMVDEETINLWPKLTVLLKLLKMCEKTNEKVLLFSQYQRTLDSISDLLQSKDIL 495 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ +N +L GLN+ G + +V F W Sbjct: 496 FLRIDGDLDDGLRKERLRRFNHMSSWGVLLMTIRVGACGLNIT-GASRVVIFDEGWS--- 551 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 I V R + G K+ V Y +++ T++E + +R K Sbjct: 552 ---TIGNQAVDRAYRIGQKKDVVTYRIVSCGTVEEKMYRRQVHK 592 >gi|89097278|ref|ZP_01170168.1| helicase, SNF2 family protein [Bacillus sp. NRRL B-14911] gi|89088101|gb|EAR67212.1| helicase, SNF2 family protein [Bacillus sp. NRRL B-14911] Length = 847 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 11/117 (9%) Query: 89 PQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G ++ I ++ N +I +L ++P + G ++L + ++F ++L Q Sbjct: 709 YGGTPREEREDIINKFKENTNEIQVLVSNPNTLGESVSLHTIAHDAIYFEYNYNLTFMLQ 768 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQ------NTIDELVLQRLRTKSTIQDLLLNA 197 +RI ++ R YYL+ N ID+ + RL K ++ Sbjct: 769 SRDRIHRLGLPESQSTR---YYYLMTVSDREIYNFIDQKIYDRLAEKEMRMKEAIDG 822 >gi|302765060|ref|XP_002965951.1| hypothetical protein SELMODRAFT_60241 [Selaginella moellendorffii] gi|300166765|gb|EFJ33371.1| hypothetical protein SELMODRAFT_60241 [Selaginella moellendorffii] Length = 1108 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 32/247 (12%), Positives = 77/247 (31%), Gaps = 62/247 (25%) Query: 8 QRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL------ 59 + E G+ + +K ++ ++ N Y + H + ++ ++ Sbjct: 298 EEERVASGNGKRQARAYAPLQNKCMELRKVCNHP-YLNYPPHCRLFNENMVRMCGKLWIL 356 Query: 60 --EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEG 107 +I + + +++ L L+ + + I ++N Sbjct: 357 DRILIKLQRSGHRVLLFSTMTKLLDILEDYLQWRGLIYRRIDGTTPLDSRETAIVDFNAP 416 Query: 108 --KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNLQ + +V + + + E V R + G K V Sbjct: 417 GSQCFIFLLSIRAAGRGLNLQT-ADTVVIYDPDPNPKN-----EEQAVARAHRIGQKSEV 470 Query: 166 FVYYL--IAQ------------------------------NTIDELVL-QRLRTKSTIQD 192 V Y+ + + +++ LV + K + D Sbjct: 471 KVIYMEAVVESFTSYQMEDELRNGGSLDVDDDMAGKDRYMGSVESLVRNNIQQHKIDMAD 530 Query: 193 LLLNALK 199 ++NA + Sbjct: 531 EVINAGR 537 >gi|73994977|ref|XP_543352.2| PREDICTED: similar to E1A binding protein p400 (p400 kDa SWI2/SNF2-related protein) (Domino homolog) (hDomino) (CAG repeat protein 32) (Trinucleotide repeat-containing gene 12 protein) [Canis familiaris] Length = 3119 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 65/193 (33%), Gaps = 25/193 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y R L L+ + E + K++AL ++ Sbjct: 1844 LYSHRMRILRHCLKEHIAPYAQQLQRMTALR------SLRFPELRLVQFDSGKLEALAIL 1897 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKI 109 ++K + +++ L L+ + ++ +N + +I Sbjct: 1898 LQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRI 1957 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G++L + +VF+ + +++ + G ++ V +Y Sbjct: 1958 FCAILSTHSRATGVSL-VEADAVVFYDNDLNP-----VMDAKAQEWCERIGRRKDVHIYR 2011 Query: 170 LIAQNTIDELVLQ 182 L++ N+I+E +L+ Sbjct: 2012 LVSGNSIEEKLLK 2024 >gi|302325414|gb|ADL24615.1| SNF2/helicase domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 864 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 53/155 (34%), Gaps = 17/155 (10%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------KDPCTIQ 102 K+K ++ I+ + ++V F + ++ I Sbjct: 529 SGKLKRIKEIVRQAKFENRKVLVFSFFLETIKKVCAYLNDSCMEPITGAVPVSHRQEIID 588 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +L + G GLN+Q N+++ ++R + G Sbjct: 589 AFEKSPAGTVLPLQINAGGLGLNIQA-ANVVILCEPQLKPSAEM-----QAISRAYRMGQ 642 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R V VY L+ ++IDE + L+ K + + + Sbjct: 643 VRNVLVYRLLMLDSIDEKINTLLKFKKQVFNTFAD 677 >gi|157870139|ref|XP_001683620.1| helicase-like protein [Leishmania major strain Friedlin] gi|68126686|emb|CAJ04698.1| putative helicase-like protein [Leishmania major strain Friedlin] Length = 1274 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 48/127 (37%), Gaps = 11/127 (8%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + +++++ P L + G G+ + ++ + Sbjct: 859 RPIRYCRLDGSHSAAQRAAMLEDFDRPDGPALFLLSTKAGGVGITVTA-ATRVILVDTSF 917 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL-QRLRTKSTIQDLLLN-- 196 + + Q + R + G R V+VY L+ T++ + Q+L K + ++ Sbjct: 918 NPADDQ-----QAIGRAYRYGQTRPVYVYRLMCYPTLEYSIFVQKLA-KEWLFKTVIEES 971 Query: 197 ALKKETI 203 ++K++ + Sbjct: 972 SVKRDGL 978 >gi|15229135|ref|NP_189853.1| CHR38 (CHROMATIN REMODELING 38); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|7523392|emb|CAB86450.1| putative protein [Arabidopsis thaliana] Length = 1256 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 8/160 (5%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 V + ++ V EKI I + F R L + Sbjct: 1059 VMFVLNLVFRVVKREKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDLELFERGR 1118 Query: 100 TIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++ E G+ +L A +C G++L + ++ W+ + + + R Sbjct: 1119 VIDKFEEPGGQSRVLLASITACAEGISLTA-ASRVIMLDSEWNPSKT-----KQAIARAF 1172 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V+VY L+++ T++E +R K + ++ + Sbjct: 1173 RPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFSE 1212 >gi|48696652|ref|YP_024431.1| superfamily II DNA/RNA helicase [Vibrio phage VP2] gi|40950050|gb|AAR97641.1| superfamily II DNA/RNA helicase [Vibrio phage VP2] Length = 472 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 76/218 (34%), Gaps = 26/218 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----HDEKIK-A 58 + + + G+ + + + Q+ G + ++ +V + K+ Sbjct: 254 KELKDFFETEQDGDVLTVSTVLDRMTRFQQILGGNFPFLDKDGAYDVKPISGPNPKMDAM 313 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARL------------QKAFPQGRTLDKDPCTIQEWNE 106 LE I + A +I+ F +++ ++ + G + +I + + Sbjct: 314 LEDIADLDRNAKVIIWARFRAEIEQISKRLREVYGDDSVIEYHGGISESDRKASIPRFQD 373 Query: 107 --GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 A+ + G G+ L ++S + LE+ Q +R + G + Sbjct: 374 SSDPSRFFVANQQTAGMGITLT-IATFAYYYSNSFSLEQRLQSEDR-----NHRKGQRNV 427 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + D +V + L++K + L+ L++ Sbjct: 428 CTYIDIWCKADADLMVGRALKSKKDLAVLVDEELQRRI 465 >gi|117928024|ref|YP_872575.1| helicase domain-containing protein [Acidothermus cellulolyticus 11B] gi|117648487|gb|ABK52589.1| helicase domain protein [Acidothermus cellulolyticus 11B] Length = 933 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 46/119 (38%), Gaps = 8/119 (6%) Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + Y F ++ L++ + + + + G GLNLQ+ +++ Sbjct: 494 MLYEFLTERGFEVVCLNGSMDLEERKRVQDTFAKDAR--ILISTDAGGEGLNLQF-CHVV 550 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + + + W+ +Q I R+ + G V + +++++ V + L K + Sbjct: 551 INYDIPWNPMRLEQRIGRVD-----RIGQTHTVRAINFVFEDSVEHRVCEVLEEKLAVI 604 >gi|224127712|ref|XP_002320143.1| hypothetical protein POPTRDRAFT_244585 [Populus trichocarpa] gi|222860916|gb|EEE98458.1| hypothetical protein POPTRDRAFT_244585 [Populus trichocarpa] Length = 434 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 28/189 (14%) Query: 30 VKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIEKAN--AAPIIVAYHFNSDLA 82 ++ + N + + K+ L+ I+ K +++ L Sbjct: 200 MELRKTCNHPLLNYPYFNDLSKDFLVQSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLD 259 Query: 83 RLQKAFPQGRTLDKD----------PCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGN 130 L++ R + + I ++N + + + G GLNLQ + Sbjct: 260 ILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQS-AD 318 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++ + + + E V R + G R V V Y+ A + I + + + K + Sbjct: 319 TVIIYDPDPNPKN-----EEQAVARAHRIGQTREVKVIYMEAVSLIRKNI---QQYKIDM 370 Query: 191 QDLLLNALK 199 D ++NA + Sbjct: 371 ADEVINAGR 379 >gi|70943765|ref|XP_741890.1| DNA helicase [Plasmodium chabaudi chabaudi] gi|56520554|emb|CAH80365.1| DNA helicase, putative [Plasmodium chabaudi chabaudi] Length = 644 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L + G GLNL + + LWW+ IE R + G + V Sbjct: 530 NKSGKVLLCSLKAGGVGLNLT-VSSKVYLMDLWWNPA-----IEDQAFERIHRIGQLKDV 583 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y + + T++E +LQ ++K + L Sbjct: 584 NIYKFVLEKTVEERILQIHQSKQYTANQCL 613 >gi|322825950|gb|EFZ30762.1| DNA helicase, putative [Trypanosoma cruzi] Length = 914 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 47/149 (31%), Gaps = 21/149 (14%) Query: 64 EKANAAPIIVAYHFNSDL--------------ARLQKAFPQGRTLDKDPCTIQEWN-EGK 108 + +I+ H + + + Sbjct: 486 MVESGQKVIIFAHHQCMMEAIREAVESVQPKQPLDYIYITGETPAAQREALTTHFRTSTN 545 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + SCG G NL ++VF L W+ H Q +R+ + G A + Sbjct: 546 CHVAVLSMHSCGVGHNLT-CATMVVFAELDWNPSTHLQCEDRV-----HRMGQSSACVIK 599 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 YL+A+ T D ++ L+TK + +L Sbjct: 600 YLLAEGTSDSVIWPMLQTKLNVTHAVLED 628 >gi|330930186|ref|XP_003302929.1| hypothetical protein PTT_14926 [Pyrenophora teres f. teres 0-1] gi|311321396|gb|EFQ88965.1| hypothetical protein PTT_14926 [Pyrenophora teres f. teres 0-1] Length = 1159 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 17/151 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEG 107 + ++ IIV F + + + + +L K I + + Sbjct: 1001 QILNWRKEKGDVKIIVYTQFLAMIRILKRVFAKEGWRCEEYHGKMSLKKRDDAIAAFADT 1060 Query: 108 KIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 P +L A G GLNL + ++ WW+ Q R + G F Sbjct: 1061 AGPAILLASLRCGGLGLNLT-MASKVIMIDPWWNSASEQ-----QAFCRVFRIGQNEKTF 1114 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + L NT+DE +++ K D+++ Sbjct: 1115 MSRLCVTNTVDEQLVRMQERKQEEIDVVMEE 1145 >gi|71648872|ref|XP_813216.1| DNA helicase [Trypanosoma cruzi strain CL Brener] gi|70878080|gb|EAN91365.1| DNA helicase, putative [Trypanosoma cruzi] Length = 744 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 47/149 (31%), Gaps = 21/149 (14%) Query: 64 EKANAAPIIVAYHFNSDL--------------ARLQKAFPQGRTLDKDPCTIQEWN-EGK 108 + +I+ H + + + Sbjct: 316 MVESGQKVIIFAHHQCMMEAIREAVESVQPKQPLDYIYITGETPAAQREALTTHFRTSTN 375 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + SCG G NL ++VF L W+ H Q +R+ + G A + Sbjct: 376 CHVAVLSMHSCGVGHNLT-CATMVVFAELDWNPSTHLQCEDRV-----HRMGQSSACVIK 429 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 YL+A+ T D ++ L+TK + +L Sbjct: 430 YLLAEGTSDSVIWPMLQTKLNVTHAVLED 458 >gi|71653795|ref|XP_815529.1| DNA helicase [Trypanosoma cruzi strain CL Brener] gi|70880590|gb|EAN93678.1| DNA helicase, putative [Trypanosoma cruzi] Length = 938 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 47/149 (31%), Gaps = 21/149 (14%) Query: 64 EKANAAPIIVAYHFNSDL--------------ARLQKAFPQGRTLDKDPCTIQEWN-EGK 108 + +I+ H + + + Sbjct: 510 MVESGQKVIIFAHHQCMMEAIREAVESVQPKQPLDYIYITGETPAAQREALTTHFRTSTN 569 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + SCG G NL ++VF L W+ H Q +R+ + G A + Sbjct: 570 CHVAVLSMHSCGVGHNLT-CATMVVFAELDWNPSTHLQCEDRV-----HRMGQSSACVIK 623 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 YL+A+ T D ++ L+TK + +L Sbjct: 624 YLLAEGTSDSVIWPMLQTKLNVTHAVLED 652 >gi|322499423|emb|CBZ34496.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1273 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 48/127 (37%), Gaps = 11/127 (8%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + +++++ P L + G G+ + ++ + Sbjct: 858 RRIRYCRLDGSHSAAQRAAMLEDFDRPDGPELFLLSTKAGGVGITVTA-ATRVILVDTSF 916 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL-QRLRTKSTIQDLLLN-- 196 + + Q + R + G R V+VY L+ T++ + Q+L K + ++ Sbjct: 917 NPADDQ-----QAIGRAYRYGQTRPVYVYRLMCYPTLEYSIFVQKLA-KEWLFKTVIEES 970 Query: 197 ALKKETI 203 ++K++ + Sbjct: 971 SVKRDGL 977 >gi|126665998|ref|ZP_01736978.1| helicase/SNF2 family domain protein [Marinobacter sp. ELB17] gi|126629320|gb|EAZ99937.1| helicase/SNF2 family domain protein [Marinobacter sp. ELB17] Length = 942 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 60/150 (40%), Gaps = 22/150 (14%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKA------------FPQGRTLDKDPCTIQEWNEGK 108 I+ + +++ + + A +++ + I + EG Sbjct: 527 KILTPNSKEKVLIFTEYRATQAYIREILEKRFGEGSVELINGSMPHAQRRDAIARFEEGA 586 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + G G+NLQ +I+V + L W+ Q I R+ + G K+ V V+ Sbjct: 587 N--FLVSTEAGGEGINLQRKCHIMVNYDLPWNPMRLVQRIGRL-----YRYGQKKRVVVF 639 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 L + +T DE V++ + T+ + +++ L Sbjct: 640 NLHSPDTADEQVMELMYTRI---ERVVDDL 666 >gi|327396325|dbj|BAK13747.1| hypothetical protein PAJ_3668 [Pantoea ananatis AJ13355] Length = 1042 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 61/197 (30%), Gaps = 32/197 (16%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVIIE--KANAAPIIVAYHFNSDL 81 + ++ + + ++ A I+ KA ++V Sbjct: 796 ALKMLQHIRGVSVHPAMEMSGDNQSFIDASARLNACFDILHRIKAKGERVLVFIEHRKMQ 855 Query: 82 AR------------LQKAFPQGRTLDKDPCTIQEWN-----EGKIPLLFAHPASCGHGLN 124 R + K ++ + +G LL P + G GL Sbjct: 856 FRFMELARQEFGLEHIDHINGDTPIQKRQAIVRRFQHHLEQDGGFDLLVLGPKAAGTGLT 915 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA------QNTIDE 178 L ++ S WW+ +Q +R+ + G + V ++ +A +++ D Sbjct: 916 LTA-ATHVIHLSRWWNPAVEEQCNDRV-----HRIGQQHPVQIHMPMAIHAGYQEHSFDC 969 Query: 179 LVLQRLRTKSTIQDLLL 195 L+ + K ++ L Sbjct: 970 LLQGLMSRKRSLARAAL 986 >gi|118349265|ref|XP_001033509.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89287858|gb|EAR85846.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1285 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 21/168 (12%) Query: 44 EEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFN----------SDLARLQKAFPQG 91 E++ K + IIE+ I++ ++ DL Sbjct: 875 EQQQIDYKKLAKTDRVVDIIEQVQKKGEKILLFTQWHDSIQRLKKRFEDLDIGYCELHGK 934 Query: 92 RTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T+ + + ++ ++ + GLNL N ++ WW+ IE Sbjct: 935 MTIKQRAKQVHDFYRLPSKTVMVLSLMAGCVGLNLT-CANNVIIMDPWWNGA-----IED 988 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQ--NTIDELVLQRLRTKSTIQDLLLN 196 V R + G K+ V VY + + ++ID + + + K + + +L+ Sbjct: 989 QAVDRVYRIGQKKDVNVYRCLIKHDDSIDLRISELCKKKEALCNKILS 1036 >gi|322492699|emb|CBZ27976.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1872 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 23/145 (15%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWN 105 ++ +E I ++V + + L +L + ++ Sbjct: 1675 LEVVEEIWRTQPDDGVLVFSKYPTFLKLAHDAVAGQGYAPHMVCGASSLAQRQRAMRAMQ 1734 Query: 106 EGKI-------PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +LF S GLNL + N ++F + Q V R + Sbjct: 1735 PPSGDSVLSQRRILFVTSRSANAGLNLTF-ANHVIFLEPNLNPAIEQ-----QAVGRVHR 1788 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQR 183 G + V V++ A +TI+E++ +R Sbjct: 1789 FGQLKQVIVHHFFAPHTIEEVIYRR 1813 >gi|260549505|ref|ZP_05823723.1| conserved hypothetical protein [Acinetobacter sp. RUH2624] gi|260407298|gb|EEX00773.1| conserved hypothetical protein [Acinetobacter sp. RUH2624] Length = 72 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 39/69 (56%), Positives = 58/69 (84%) Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 +FFS WWDLE++QQ+IERIG TRQ QAG+ R V++Y++IA++T+DE+V++R +K +QD Sbjct: 1 MFFSHWWDLEQYQQIIERIGPTRQAQAGYDRPVYIYHIIAKDTMDEIVMERRESKREVQD 60 Query: 193 LLLNALKKE 201 LL+ A+KK Sbjct: 61 LLMEAMKKR 69 >gi|303312659|ref|XP_003066341.1| Helicase conserved C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240106003|gb|EER24196.1| Helicase conserved C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 458 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 6/105 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ + + I +L + + G GL+L + LWW+ Q Sbjct: 323 PPSERHRDIEEFRTDPSIRVLISSLKAGGTGLSLT-MAEKCILIDLWWNEAMEQ-----Q 376 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G K+ V + + +N+ID+ + KS+ + + Sbjct: 377 AFCRLFRYGQKKEVEIVRITVKNSIDDRIQLIQNAKSSNIEKTMG 421 >gi|299472392|emb|CBN77580.1| conserved unknown protein [Ectocarpus siliculosus] Length = 991 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 62 IIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDK-DPCTIQEWN-EGKI 109 + ++ I+V H + L R++ GRT K + + + Sbjct: 574 LADEMTGGKILVFAHHRNVLDALEQSVVRTGRVEYIRIDGRTKPKDRQDLVDTFQSNPSV 633 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G G+ L + +VF L+W + R + G V V Y Sbjct: 634 RVALLGLTAAGIGITLTA-ASRVVFAELYWTPAQLL-----QAEDRCHRIGQATVVKVQY 687 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L+A+ ++D+ + ++ K + ++ + E H+ Sbjct: 688 LVAKGSLDDALWPLIQEKIKLLGEMVEG-EGEANHM 722 >gi|75214627|gb|ABA18099.1| SNF2 domain-containing protein [Olimarabidopsis pumila] Length = 1256 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 8/160 (5%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 V + ++ V EKI I + F R L + Sbjct: 1059 VMFVLNLVFRVVKREKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDLELFERGR 1118 Query: 100 TIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++ E G+ +L A +C G++L + ++ W+ + + + R Sbjct: 1119 VIDKFEEPGGQSRVLLASITACAEGISLTA-ASRVIMLDSEWNPSKT-----KQAIARAF 1172 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V+VY L+++ T++E +R K + ++ + Sbjct: 1173 RPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFSE 1212 >gi|74217178|dbj|BAC34934.2| unnamed protein product [Mus musculus] Length = 445 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 ++++ + W+ + ++ + R + G + V V+ I NT++E +++R Sbjct: 5 LATADVVILYDSDWNPQ-----VDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAE 59 Query: 186 TKSTIQDLLLNALK 199 K + +++ + Sbjct: 60 MKLRLDSIVIQQGR 73 >gi|320528040|ref|ZP_08029206.1| protein, SNF2 family [Solobacterium moorei F0204] gi|320131666|gb|EFW24230.1| protein, SNF2 family [Solobacterium moorei F0204] Length = 706 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 16/168 (9%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARL--------QKAFP 89 W ++ K + + + + + +I+ +F L+ + Sbjct: 517 FMAMRRVSWNSLNSTKAERMTELCLQALSEGRKVIIFSYFLDTLSFVSDLLLGKALPVIS 576 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 +L+K + +++E +L + G GLN+Q I++ + Sbjct: 577 GKLSLEKRQDILHQFDEPIARVLPIQIHAGGIGLNIQT-AEIVILCEPQLKPSDEM---- 631 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++R + G VFVY L++ +TIDE +++RL K I D + Sbjct: 632 -QAISRVYRMGQVNHVFVYRLLSADTIDETLVKRLHEKQNIFDQFADE 678 >gi|297711711|ref|XP_002832469.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like, partial [Pongo abelii] Length = 90 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 39/78 (50%), Gaps = 6/78 (7%) Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+NL + ++F ++ + + R + G ++V V LI ++T++E+ Sbjct: 1 GVGMNLTA-ADTVIFVDSDFNPQN-----DLQAAARAHRIGQNKSVKVIRLIGRDTVEEI 54 Query: 180 VLQRLRTKSTIQDLLLNA 197 V ++ +K + ++++ Sbjct: 55 VYRKAASKLQLTNMIIEG 72 >gi|224101971|ref|XP_002312496.1| hypothetical protein POPTRDRAFT_657056 [Populus trichocarpa] gi|222852316|gb|EEE89863.1| hypothetical protein POPTRDRAFT_657056 [Populus trichocarpa] Length = 87 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +F L ++ + I+R + G + V +Y ++ + T+DE V + + K + Sbjct: 1 YCIFPDLDFNPQ-----IDRQVEDHCHRIGHTKPVTIYRMVTRGTVDETVDEMAKWKLVL 55 Query: 191 QDLLLNA 197 +L++ Sbjct: 56 DAAVLDS 62 >gi|47211680|emb|CAF92844.1| unnamed protein product [Tetraodon nigroviridis] Length = 295 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 61/203 (30%), Gaps = 67/203 (33%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN 105 + + I + +++ ++ L +K ++ K ++ +N Sbjct: 4 LDYILAITKTTTDDKVVLVSNYTQTLDLFEKLCRSRRYSYVRLDGTMSIKKRARMVERFN 63 Query: 106 EGKIP---------------------------LLFAHPASCGHGLNLQYGGNILVFFSLW 138 E + + + G GLNL G N LV F Sbjct: 64 EASVSGGAGSTRPPGSGCSWASPLRLWQSPEFIFMLSSKAGGCGLNL-IGANRLVMFDPD 122 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA------------------------QN 174 W+ + + R + G ++ ++Y L+A Sbjct: 123 WNPAN-----DEQAMARVWRDGQRKTCYIYRLLAVRAAQTRCRRRRCAAVTGVCVCPQTG 177 Query: 175 TIDELVLQRLRTKSTIQDLLLNA 197 TI+E +LQR K + +++ Sbjct: 178 TIEEKILQRQAHKKALSSCVVDE 200 >gi|312213815|emb|CBX93817.1| similar to DNA repair protein rad5 [Leptosphaeria maculans] Length = 1207 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 7/152 (4%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLF 113 K +++II A I + + + + G TL I + + I ++ Sbjct: 1016 KNPQVKIIIYTQFLAMISILARICHNEKWKIEQYHGGMTLHARDKAIASFAEDPDIRIML 1075 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 A G GLNL + ++ WW+ Q R + G + L Sbjct: 1076 ASLRCGGLGLNLT-MASKVIMMDPWWNSASEQ-----QAFCRVFRIGQLEETSMSRLCVN 1129 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 NT+D+ ++ K ++ K+ + Sbjct: 1130 NTVDKQLIAMQERKDAEIKSVMENDGKKVSRM 1161 >gi|261202002|ref|XP_002628215.1| DNA repair helicase [Ajellomyces dermatitidis SLH14081] gi|239590312|gb|EEQ72893.1| DNA repair helicase [Ajellomyces dermatitidis SLH14081] Length = 275 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 4/114 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 Q +D + +L + G G++L N + LWW+ QQ Sbjct: 8 HTGQMPLRARDKHIRTFSKDPAARILICSLRTAGIGVDLTAT-NKCILVDLWWNEAMEQQ 66 Query: 147 MIE---RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +R + +R V ++ QN+ID+ + K+ + ++ + Sbjct: 67 ACTCTLITAFSRIFRIRQQRNVEFVRIVVQNSIDDRIQLIQNEKTDGIEQVIGS 120 >gi|119490437|ref|ZP_01622898.1| hypothetical protein L8106_27294 [Lyngbya sp. PCC 8106] gi|119453908|gb|EAW35063.1| hypothetical protein L8106_27294 [Lyngbya sp. PCC 8106] Length = 1140 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 73/204 (35%), Gaps = 20/204 (9%) Query: 5 HKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + + E IE + + ++L + E+ E+ + ++ + Sbjct: 428 DELENVAVESTIAEKIEQLREELQELKRLVKLTQETIELGTERKLNELQNLLKRSEFDEL 487 Query: 64 EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + +++ L L+ G + + + + Sbjct: 488 SEGEG-RLLIFTEHRDTLQYLKQNLQQWGYSTCEIHGGMNVIDRKTAQKNFQ--FNKQIC 544 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G G+NLQ+ ++V + + W+ +Q + RI + G KR V+++ +A Sbjct: 545 IATEAAGEGINLQF-CRLMVNYDIPWNPNRLEQRMGRI-----HRIGQKRDVYIFNFVAV 598 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 NT++ VL++L K +N Sbjct: 599 NTVEGRVLEKLLKKLDEIRAAMND 622 >gi|149730550|ref|XP_001489638.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Equus caballus] Length = 1072 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 321 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVPSSERIHL 380 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + + G GL +VF L+WD + R + Sbjct: 381 VNQFQKDPETRVAILSIQAAGQGLTFTA-ATHVVFAELYWDPGHI-----KQAEDRAHRI 434 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA+ T+D L+ L K+ + LN K++ Sbjct: 435 GQCSSVNIHYLIAKGTLDTLMWGMLNRKAQVTGSTLNGRKEQL 477 >gi|301061086|ref|ZP_07201883.1| helicase C-terminal domain protein [delta proteobacterium NaphS2] gi|300444880|gb|EFK08848.1| helicase C-terminal domain protein [delta proteobacterium NaphS2] Length = 932 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 46/115 (40%), Gaps = 8/115 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 F S+ +D+ + + + +L + G GLNLQ+ ++++ + Sbjct: 497 FLSERGFPVVCLNGSMDMDERQKVQESF-AQEARVLV-STDAGGEGLNLQF-CHVVINYD 553 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + W+ +Q I R+ + G V + +++++ V + L K + Sbjct: 554 IPWNPMRLEQRIGRVD-----RIGQTHVVRAVNFVFEDSVEHRVREVLEEKLAVI 603 >gi|67587278|ref|XP_665245.1| DNA helicase [Cryptosporidium hominis TU502] gi|54655812|gb|EAL35016.1| DNA helicase [Cryptosporidium hominis] Length = 405 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 10/165 (6%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT 100 Y DE+ H + A+E ++ K F + + ++ Sbjct: 243 YNDEKYVIFGHHHVMLDAIESVLLKKRKTACNSGGPF-----LFIRIDGKTPGNKREEYV 297 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N + +CG GLNL G ++F L+W Q +R Sbjct: 298 KEFQNNENCKVALLSITACGQGLNLTSAGT-VIFAELYWVPGTMLQAEDRCHRI----GT 352 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + ++YLIA+ T+D+ + L K I L+ + + + Sbjct: 353 QYSCINIHYLIAEETLDDKMWGTLCRKQKIMASTLDGIDQRKNDI 397 >gi|149634326|ref|XP_001510803.1| PREDICTED: similar to mDomino [Ornithorhynchus anatinus] Length = 3040 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 62/165 (37%), Gaps = 19/165 (11%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 + Q++ + + + K++AL ++++K + +++ L L+ Sbjct: 1761 QLQQISAPYLLQFPDLRLVQYDSGKLEALAILLQKLKSEGRRVLILSQMILMLDILELFL 1820 Query: 89 PQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + ++ +N +I S G+NL + +VF+ Sbjct: 1821 NFHFITFIRIDEYANSEQRQELMKSFNRNKRIFCAILSTHSRSTGINL-VEADTVVFYDN 1879 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + +++ + G + + +Y L++ N+++E +L+ Sbjct: 1880 DLNP-----VMDAKAQEWCERIGRCKDIHIYRLVSGNSVEEKLLK 1919 >gi|190352247|gb|ACE76519.1| Smarca4-like protein [Sus scrofa] Length = 244 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++ +NE + + G GLNLQ + ++ F W+ + + Sbjct: 5 EDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ-----DLQA 58 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V L N+++E L + K + ++ A Sbjct: 59 QDRAHRIGQQNEVRVLRLCTVNSVEEKFLAAAKYKLNVDQKVIQA 103 >gi|157114821|ref|XP_001652438.1| hypothetical protein AaeL_AAEL006963 [Aedes aegypti] gi|108877144|gb|EAT41369.1| conserved hypothetical protein [Aedes aegypti] Length = 726 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 51/140 (36%), Gaps = 8/140 (5%) Query: 56 IKALEVIIEKANAAPIIVA-YHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLF 113 +K + I A+ ++ A + S D ++++ + Sbjct: 518 LKEKQKFIIFAHHIKMLDAISKYLSKQKVDFIRIDGTTRSDLRSSLVEKFQTKDSCRAAV 577 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 +C G+ L +++F L W+ +R + G + V V YL+A+ Sbjct: 578 LSLKACNAGITLTA-AQLVMFAELDWNPSTL-----AQAESRAHRIGQEGTVIVRYLLAK 631 Query: 174 NTIDELVLQRLRTKSTIQDL 193 T D+++ L+ K I + Sbjct: 632 GTADDIIWTMLQKKQNILNK 651 >gi|260712905|ref|YP_003226960.1| SNF2-related protein [Zymomonas mobilis subsp. mobilis NCIB 11163] gi|258553431|gb|ACV76376.1| SNF2-related protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 1034 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 73/221 (33%), Gaps = 39/221 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALE 60 K Y +++L + + N+ + K + ++ A Sbjct: 769 KAYDDIRKKL------KEGQRGNALKLLHHIRTASVHPAVSSVSTDQKFIAQSGRLAATF 822 Query: 61 VIIEKAN--AAPIIVA-------YHF----NSDLARLQKAFPQGRTL-DKDPCTIQEWNE 106 I+++ +V Y F S+ + G+T + + + + Sbjct: 823 EILKRIKTRGERALVFIENLKMQYRFAALVRSEFGLERVEIINGQTSISERQKIVDRFQK 882 Query: 107 G------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 K LL P + G GL L ++ S WW+ +Q +R+ + G Sbjct: 883 HLKDSKNKFDLLILGPRAAGTGLTLTA-ATHVIHLSRWWNPAVEEQCNDRV-----HRLG 936 Query: 161 FKRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLLL 195 + V+VY +A + D L+ ++ K + +L Sbjct: 937 QTQPVYVYVPMAIHPYYKSKSFDCLLHNLMQKKRRLAQNIL 977 >gi|114581132|ref|XP_515805.2| PREDICTED: zinc finger, RAN-binding domain containing 3 [Pan troglodytes] Length = 977 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 513 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHL 572 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G GL + +VF L+WD + R + Sbjct: 573 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRI 626 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 627 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 669 >gi|164658682|ref|XP_001730466.1| hypothetical protein MGL_2262 [Malassezia globosa CBS 7966] gi|159104362|gb|EDP43252.1| hypothetical protein MGL_2262 [Malassezia globosa CBS 7966] Length = 1014 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 33/177 (18%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQ 102 + ++ L + + ++ F L +Q Q + + ++ Sbjct: 819 NALMQQLAELTKSDPTCKGVIFSQFTGFLNLIQAHLVQRQYAFVRLDGRTPQKEREHVLR 878 Query: 103 EW-NEGKIPLLFAHPASC----------------------GHGLNLQYGGNILVFFSLWW 139 + NE L + L + Sbjct: 879 TFANEPGPFFLLMSLRAGGVGLNCTFLCACTNTSSDSGESRVAHGLLVESKHVCCKKHET 938 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + E + R + G RAV V+ L+ +TI++ +L+ R K + D L+ Sbjct: 939 KKTRLTPVREDQAIDRVHRLGQSRAVTVHRLLVNDTIEDRILEIQRHKKQLVDHALS 995 >gi|326389940|ref|ZP_08211503.1| helicase domain protein [Thermoanaerobacter ethanolicus JW 200] gi|325994000|gb|EGD52429.1| helicase domain protein [Thermoanaerobacter ethanolicus JW 200] Length = 894 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 66/172 (38%), Gaps = 22/172 (12%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 + + ++ + + +K + F ++++ Sbjct: 459 IDFIDQLSMEYKNSQKFIVFTEFLATQQYLK-----DFLESKGYKVAILNGSMSMEERDA 513 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++E+ + + G GLNLQ+ NI++ + L W+ + +Q I R+ + Sbjct: 514 SLKEFKN--YKDVLISTDAGGEGLNLQF-CNIVINYDLPWNPMKIEQRIGRVD-----RI 565 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTI---------QDLLLNALKKET 202 G +R V V + ++TI+ V + L K + +L++++ E Sbjct: 566 GQERDVLVLNFMLEDTIEFRVREVLEEKLRMIYEQFGVDKMGDILDSVQSEM 617 >gi|294933433|ref|XP_002780713.1| DNA helicase, putative [Perkinsus marinus ATCC 50983] gi|239890749|gb|EER12508.1| DNA helicase, putative [Perkinsus marinus ATCC 50983] Length = 318 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 8/107 (7%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K P ++++ + I + +C GL L +++VF L+W + Sbjct: 158 PQTKRPELVKKFQEDDDIRVAVLSITACSEGLTLTA-ASVVVFAELYWVPGTIE-----Q 211 Query: 152 GVTRQRQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G ++ V ++YLIA+ + DE V L+ K +LN Sbjct: 212 AEARVHRIGQTKSCVDIHYLIARGSPDEAVYACLKRKKEDTSAILNG 258 >gi|154251630|ref|YP_001412454.1| helicase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154253990|ref|YP_001414814.1| helicase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154155580|gb|ABS62797.1| helicase domain protein [Parvibaculum lavamentivorans DS-1] gi|154157940|gb|ABS65157.1| helicase domain protein [Parvibaculum lavamentivorans DS-1] Length = 941 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 35/200 (17%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 + G + +A + K Q + K+ + Sbjct: 454 TEAAGTDAKAESLLELIYKLQQ-------------EEGDPALKVLVFTEFVPTQA----- 495 Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + + G ++ T+Q + G +L + G GLNLQ+ +++ Sbjct: 496 MLADYLESRGFTVATLNGGMDMEARTRTLQTF-AGDARVLI-STDAGGEGLNLQF-CHVI 552 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI-- 190 V F + W+ +Q I R+ + G K V + ++T++ V Q L K + Sbjct: 553 VNFDMPWNPMRIEQRIGRVD-----RIGQKHVVRALNFVLEDTVEHRVRQVLEEKLAVIA 607 Query: 191 -------QDLLLNALKKETI 203 ++++ + E + Sbjct: 608 EEFGVDKAADVMDSAEVEPV 627 >gi|20219037|gb|AAM15781.1|AC104428_2 Hypothetical protein [Oryza sativa Japonica Group] gi|108706352|gb|ABF94147.1| SNF2 domain-containing protein, putative, expressed [Oryza sativa Japonica Group] Length = 1197 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 22/156 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLAR---------------LQKAFPQGRTLDKD 97 K + + +A ++V + L G T D+ Sbjct: 1004 KAKFVHNLLSLSEATGGKVLVFSQYVRSLIFLEKLVSRMKGWKSEVHIFRVTGGSTQDQR 1063 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + F +CG G++L G + +V + + + R + R Sbjct: 1064 EQAVHRFNNSPDARVFFGSIKACGEGISL-VGASRIVILDVHENPS-----VMRQAIGRA 1117 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + V+ Y L+A ++ +E K + Sbjct: 1118 YRPGQSKMVYCYRLVAADSPEEDDHHTAFKKERVSK 1153 >gi|86136229|ref|ZP_01054808.1| hypothetical protein MED193_18939 [Roseobacter sp. MED193] gi|85827103|gb|EAQ47299.1| hypothetical protein MED193_18939 [Roseobacter sp. MED193] Length = 1032 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 55/201 (27%), Gaps = 32/201 (15%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVIIE--KANAAPIIVAYHF 77 + ++ + + ++ A I+ + +V Sbjct: 782 TRGGALKMLHHIRSVSVHPDASSPTEDETYISMSARLLATMDILRGVQDRGERALVFIEH 841 Query: 78 NSDLARL------------QKAFPQGRTLDKDPCTIQEWN-----EGKIPLLFAHPASCG 120 R + + + + + LL P + G Sbjct: 842 VKMQHRFIELTKREFGLPRVDLINGSTPIPRRQEIVNRFQRHLARDEGFDLLVLGPKAAG 901 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA------QN 174 GL L ++ S WW+ +Q +R+ + G + V V+ +A N Sbjct: 902 TGLTLTA-ATHVIHLSRWWNPAVEEQCNDRV-----HRIGQSKPVTVHVPMAIHPGYQHN 955 Query: 175 TIDELVLQRLRTKSTIQDLLL 195 + D L+ + K + L Sbjct: 956 SFDCLLHSLMARKRRLATSAL 976 >gi|302769926|ref|XP_002968382.1| hypothetical protein SELMODRAFT_60240 [Selaginella moellendorffii] gi|300164026|gb|EFJ30636.1| hypothetical protein SELMODRAFT_60240 [Selaginella moellendorffii] Length = 1107 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 32/247 (12%), Positives = 77/247 (31%), Gaps = 62/247 (25%) Query: 8 QRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL------ 59 + E G+ + +K ++ ++ N Y + H + ++ ++ Sbjct: 298 EEERVASGNGKRQARAYAPLQNKCMELRKVCNHP-YLNYPPHCRLFNENMVRMCGKLWIL 356 Query: 60 --EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWNEG 107 +I + + +++ L L+ + + I ++N Sbjct: 357 DRILIKLQRSGHRVLLFSTMTKLLDILEDYLQWRGLIYRRIDGTTPLDSRETAIVDFNAP 416 Query: 108 --KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G GLNLQ + +V + + + E V R + G K V Sbjct: 417 GSQCFIFLLSIRAAGRGLNLQT-ADTVVIYDPDPNPKN-----EEQAVARAHRIGQKSEV 470 Query: 166 FVYYL--IAQ------------------------------NTIDELVL-QRLRTKSTIQD 192 V Y+ + + +++ LV + K + D Sbjct: 471 KVIYMEAVVESFTSYQMEDELRNGGSLDVDDDMAGKDRYMGSVESLVRNNIQQHKIDMAD 530 Query: 193 LLLNALK 199 ++NA + Sbjct: 531 EVINAGR 537 >gi|299531998|ref|ZP_07045397.1| helicase, putative [Comamonas testosteroni S44] gi|298720034|gb|EFI60992.1| helicase, putative [Comamonas testosteroni S44] Length = 188 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 11/106 (10%) Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I+ + +L P + G G+N+Q N +V ++ W+ + E R Sbjct: 29 RQKRIKAFQEAPGFGVLVLSPVAVGFGVNIQA-ANHVVHYTRTWNPAK-----EDQATDR 82 Query: 156 QRQAGFKRAVFVYYLI--AQN--TIDELVLQRLRTKSTIQDLLLNA 197 ++G K+ V+VYY + A++ T D + + L K + + +LN Sbjct: 83 AYRSGQKKDVYVYYPVVWAEDFTTFDVKLDRLLTYKRGLAEDMLNG 128 >gi|295695496|ref|YP_003588734.1| SNF2-related protein [Bacillus tusciae DSM 2912] gi|295411098|gb|ADG05590.1| SNF2-related protein [Bacillus tusciae DSM 2912] Length = 688 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 19/156 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK----------AFPQGRTLDKDPCTIQ 102 K+ L I+ +IV + + L + F G T + + Sbjct: 482 SAKVAELIRILSAF-GDKMIVFTKYRATQEILVRALRRRDFRVAEFHGGLTRKEKDREVA 540 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + E + G G NLQ+ N +V F L W+ +Q I RI + G Sbjct: 541 YFREEAD--VLVSTEVGGEGRNLQF-CNGMVNFDLPWNPMAIEQRIGRI-----HRIGQT 592 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R VFVY L A +T++ +L L K + +L++ + Sbjct: 593 RDVFVYNLAALHTLEHHMLDVLDRKINLFELVVGEV 628 >gi|83765202|dbj|BAE55345.1| unnamed protein product [Aspergillus oryzae] Length = 1003 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 17/135 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 I+ + L + K R + + ++ +P+L + Sbjct: 851 KSIIFSCWTRTLDLIAKHLKASRIEFERIDGKTSTSQRQKILDRFDGTRTVPVLIMTTGT 910 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLNLQ N + W+ +E + R + G ++ V V +N+I+E Sbjct: 911 GAFGLNLQSV-NRVFIVEPQWNPS-----VESQAIARAIRLGQEQQVLVTRYRVENSIEE 964 Query: 179 LVLQRLRTKSTIQDL 193 + + K I + Sbjct: 965 AMCSQQTHKLKISQM 979 >gi|322492158|emb|CBZ27432.1| putative helicase-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1261 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 48/127 (37%), Gaps = 11/127 (8%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + +++++ P L + G G+ + ++ + Sbjct: 859 RPIRYCRLDGSHSAAQRAAMLEDFDRSHGPDLFLLSTKAGGVGITVTA-ATRVILVDTSF 917 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL-QRLRTKSTIQDLLLN-- 196 + + Q + R + G R V+VY L+ T++ + Q+L K + ++ Sbjct: 918 NPADDQ-----QAIGRAYRYGQTRPVYVYRLMCYPTLEYSIFVQKLA-KEWLFKTVIEES 971 Query: 197 ALKKETI 203 ++K++ + Sbjct: 972 SVKRDGL 978 >gi|307564893|ref|ZP_07627418.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] gi|307346429|gb|EFN91741.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] Length = 3762 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 45/110 (40%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T+ K + N G++ ++ + G G+N+Q + L+ ++ Q Sbjct: 1913 MKSGMTVKKKLEIFDKVNRGEVRVIMGSTFTLGTGVNIQERLHTLIHLDAPNRPMDYTQR 1972 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + V V ++++D QRL+TK I D ++N Sbjct: 1973 NGRILRQGNIHKEMNKPVRVLRFGVEDSLDVTAYQRLKTKGAIADSIMNG 2022 >gi|258652903|ref|YP_003202059.1| helicase domain-containing protein [Nakamurella multipartita DSM 44233] gi|258556128|gb|ACV79070.1| helicase domain protein [Nakamurella multipartita DSM 44233] Length = 648 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 36/115 (31%), Gaps = 6/115 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 R + E+ G++PLL + G G+ L G W Sbjct: 499 RPRQVGVITGATPGAERVRLCDEYQAGRLPLLVCSIPTVGVGVTLTRGC------DAWMA 552 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RQ + G R V V I T+DE V L K+ D +L Sbjct: 553 ETSWTPAEISQAEDRQWRRGQSRNVVVTTFIGLGTLDERVQDSLGRKADDLDQVL 607 >gi|75674449|ref|YP_316870.1| helicase [Nitrobacter winogradskyi Nb-255] gi|74419319|gb|ABA03518.1| Superfamily II DNA/RNA helicase, SNF2 family [Nitrobacter winogradskyi Nb-255] Length = 541 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 8/112 (7%) Query: 90 QGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + ++ TI + N +I + G+NLQ N+L+ F L W+ +Q Sbjct: 347 NGSSGQRNQDTIARFRGNPPEIR-AIVSTEAGSEGVNLQ-IANVLINFDLPWNPMIVEQR 404 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I R+ + V +Y ++ T +E ++ RL TK + + ++ Sbjct: 405 IGRVQRL----GSQHKNVVIYNVMLAGTFEEYIVGRLMTKLQMATDAIGDIE 452 >gi|321156899|emb|CBW38888.1| putative conjugative transposon DNA recombination protein [Streptococcus pneumoniae] Length = 2081 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 6/122 (4%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + +K ++ N G++ +L A G GLN+Q + + W Sbjct: 1705 MEIAFVHDANSDEKKNSLSRKVNAGEVRVLLASTEKGGTGLNVQSKMKAVHHLDVPWRPS 1764 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + QQ RI Q + V +Y+ I + + D + K ++ + KE Sbjct: 1765 DIQQRNGRIIR----QGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQIMTS--KEP 1818 Query: 203 IH 204 I Sbjct: 1819 IR 1820 >gi|189218338|ref|YP_001938980.1| Superfamily II DNA/RNA helicase, SNF2 family [Methylacidiphilum infernorum V4] gi|189185196|gb|ACD82381.1| Superfamily II DNA/RNA helicase, SNF2 family [Methylacidiphilum infernorum V4] Length = 940 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 46/119 (38%), Gaps = 8/119 (6%) Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + Y F ++ +++ + + + + G GLNLQ+ +++ Sbjct: 501 MLYEFLTERGFKVVCLNGSMDMEERKRVQNAFAKDAR--ILISTDAGGEGLNLQF-CHVV 557 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + + + W+ +Q I R+ + G V + +++++ V + L K + Sbjct: 558 INYDIPWNPMRLEQRIGRVD-----RIGQTHTVHAINFVFEDSVEHRVREVLEEKLAVI 611 >gi|171679323|ref|XP_001904608.1| hypothetical protein [Podospora anserina S mat+] gi|170939287|emb|CAP64515.1| unnamed protein product [Podospora anserina S mat+] Length = 997 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 18/151 (11%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQE 103 K+ AL I + I+ + L +L + +++ Sbjct: 825 SKLLALLKDISMHLSQKSIIFSSWKKTLNLISELLTSYRIPFYCIHGSLSLGERIRILKD 884 Query: 104 WNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + +L + GLNL + + W+ +E + R + G Sbjct: 885 FRSSSGANVLLMTLGTGAVGLNL-AVASRIYLMEPQWNPS-----VELQAIGRALRLGQT 938 Query: 163 RAVFVYYLIAQNTIDE-LVLQRLRTKSTIQD 192 V + I ++TI++ VL R K + Sbjct: 939 EQVAIVRYIVKHTIEDSNVLSRQEAKLQLAS 969 >gi|226227641|ref|YP_002761747.1| hypothetical protein GAU_2235 [Gemmatimonas aurantiaca T-27] gi|226090832|dbj|BAH39277.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 588 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 9/131 (6%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQG-RTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGL 123 V + L + G + + + + + +L S Sbjct: 414 GWHHAVYGIWREALREYRPVMYTGAESPTQRDAALARFKDPSDEGSRVLIMSLRSGAGVD 473 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 LQ+ +VF L W H+Q R+ + V YY+ A + D ++++ Sbjct: 474 GLQHACRTVVFGELDWSPGVHEQCAGRV-----HRDAQGEPVTAYYMCADDGADPIMIEV 528 Query: 184 LRTKSTIQDLL 194 L K + + + Sbjct: 529 LGVKRSQLEPV 539 >gi|302422820|ref|XP_003009240.1| transcription termination factor 2 [Verticillium albo-atrum VaMs.102] gi|261352386|gb|EEY14814.1| transcription termination factor 2 [Verticillium albo-atrum VaMs.102] Length = 924 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 19/152 (12%) Query: 50 EVHDEKIKALEVII---EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--PCTIQEW 104 + K +AL I+ K + +++ + S L +Q + + Sbjct: 763 DFKSSKTEALLKIVQATCKDPQSKVVIFSQWTSFLNIIQTQIEEAGLKWTRIDGSMKPDK 822 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + I L + ++ WW IE V R + G KR Sbjct: 823 RDAAIAALVGLNLVA---------ADTVILADSWWAPA-----IEDQAVDRVHRLGQKRP 868 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 V+ L+ +NTI+E VL+ K + Sbjct: 869 TTVWRLVMENTIEEQVLEIQAAKRQLISKAFQ 900 >gi|325119483|emb|CBZ55036.1| hypothetical protein NCLIV_054610 [Neospora caninum Liverpool] Length = 1180 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 39/111 (35%), Gaps = 13/111 (11%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G + + ++ +L G GL L N ++F + + + E Sbjct: 897 GHSKAELAKLRCFRHDPDARVLLCSLLRAGRGLTLTE-ANHVIFLEVPLN-----RAEEE 950 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR-------LRTKSTIQDLL 194 V R + KR V+ I +++++E ++Q L + + Sbjct: 951 QAVGRVYRMAQKRQTHVWRFIVKDSVEERIVQMRQNPRDSLSERLATAAAV 1001 >gi|197308128|gb|ACH60415.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308130|gb|ACH60416.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308132|gb|ACH60417.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308134|gb|ACH60418.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308136|gb|ACH60419.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308138|gb|ACH60420.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308140|gb|ACH60421.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308142|gb|ACH60422.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308144|gb|ACH60423.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308146|gb|ACH60424.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308148|gb|ACH60425.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308150|gb|ACH60426.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308152|gb|ACH60427.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308154|gb|ACH60428.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308156|gb|ACH60429.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] gi|197308158|gb|ACH60430.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga menziesii] Length = 73 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 35/79 (44%), Gaps = 8/79 (10%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+++N+ + + G G+NL + + + W+ + ++ + R + Sbjct: 1 IKDFNDPDSKFCIFLLSTRAGGLGINLTA-ADTCIIYDSDWNPQ-----MDMQAMDRCHR 54 Query: 159 AGFKRAVFVYYLIAQNTID 177 G + V VY LI ++++ Sbjct: 55 IGQTKPVHVYRLITAHSVE 73 >gi|145348662|ref|XP_001418764.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578994|gb|ABO97057.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1156 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 66/228 (28%), Gaps = 67/228 (29%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHD-------EKIKALEVIIEKAN--AAPIIVAYHFNSD 80 ++ +L N + + K L+ ++ K +++ Sbjct: 755 MELRKLCNHPSLSYPPEKGGDFRGPNLVRAGGKFWILDRLLVKLQRSGHRVLLFCTMTKL 814 Query: 81 LARLQKAFPQ-----------------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGH 121 L L+ +L++ I ++N + + G Sbjct: 815 LDLLENYLQWRWTTPDGQDLKYCRIDGNTSLEQREIAINDFNAPHSDKFIFLLSIRAAGR 874 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ + +V + + + E + R + G R V V + A +D+ ++ Sbjct: 875 GLNLQT-ADTVVVYDPDPNPKN-----EEQAIARAHRIGQTREVRVIHFEA---VDDDIV 925 Query: 182 QR------------------------------LRTKSTIQDLLLNALK 199 Q+ + K + +++A + Sbjct: 926 QKKKGSKKEEVGWGGPNRSYCESLESSVRNVIQKQKIEMAAEIVDAGR 973 >gi|260823378|ref|XP_002604160.1| hypothetical protein BRAFLDRAFT_119758 [Branchiostoma floridae] gi|229289485|gb|EEN60171.1| hypothetical protein BRAFLDRAFT_119758 [Branchiostoma floridae] Length = 761 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++F ++ + + R + G R V + LI ++T++E++L+R Sbjct: 299 LASADTVIFMDSDFNPQN-----DLQAAARAHRIGQTRPVKIIRLIGRSTVEEIILKRAE 353 Query: 186 TKSTIQDLLLNA 197 K + + ++ Sbjct: 354 AKLKLTNSVIEG 365 >gi|242080501|ref|XP_002445019.1| hypothetical protein SORBIDRAFT_07g002945 [Sorghum bicolor] gi|241941369|gb|EES14514.1| hypothetical protein SORBIDRAFT_07g002945 [Sorghum bicolor] Length = 749 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 8/116 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCT-IQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVF 134 + G T +D + +N +LF +CG G++L G + +V Sbjct: 594 MKGWHVGKEIFMISGDTSQEDREVAVDHFNNSADAKVLFGSIKACGEGISL-VGASRVVI 652 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + + R + R + G ++ VFVY L+A ++ +E V + K I Sbjct: 653 LDVHLNPSVT-----RQAIGRAFRPGQQKKVFVYRLVAADSDEEKVHETAFKKEVI 703 >gi|194396911|ref|YP_002037980.1| Tn5253 SNF2-related: helicase [Streptococcus pneumoniae G54] gi|194356578|gb|ACF55026.1| Tn5253 SNF2-related: helicase [Streptococcus pneumoniae G54] Length = 2074 Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 6/122 (4%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + +K ++ N G++ +L A G GLN+Q + + W Sbjct: 1698 MEIAFVHDANSDEKKNSLSRKVNAGEVRVLLASTEKGGTGLNVQSKMKAVHHLDVPWRPS 1757 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + QQ RI Q + V +Y+ I + + D + K ++ + KE Sbjct: 1758 DIQQRNGRIIR----QGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQIMTS--KEP 1811 Query: 203 IH 204 I Sbjct: 1812 IR 1813 >gi|302906263|ref|XP_003049441.1| hypothetical protein NECHADRAFT_106263 [Nectria haematococca mpVI 77-13-4] gi|256730376|gb|EEU43728.1| hypothetical protein NECHADRAFT_106263 [Nectria haematococca mpVI 77-13-4] Length = 750 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I +L + GL L N++ W+ IE +TR + G R V V Sbjct: 645 NIRVLLISINTGAVGLTLTK-ANVVHIVEPQWNPA-----IEEQAITRVVRMGQTRPVTV 698 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + I ++++ V++ + K+ I L + Sbjct: 699 FKYIMNESVEQGVVKLQQRKTRIVKLSMQD 728 >gi|254478047|ref|ZP_05091431.1| Type III restriction enzyme, res subunit family [Carboxydibrachium pacificum DSM 12653] gi|214036051|gb|EEB76741.1| Type III restriction enzyme, res subunit family [Carboxydibrachium pacificum DSM 12653] Length = 881 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 69/174 (39%), Gaps = 31/174 (17%) Query: 50 EVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLD 95 + D K+ L ++ K + ++ F + L++ + + Sbjct: 447 QFFDVKLDTLFDLLFKVRLGESDVKFLIFTEFRATQDYLREMLQKRGYKVVVLNGSMDIG 506 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++E+ E + + G GLNLQ+ +I++ + + W+ + +Q I R+ Sbjct: 507 ERKAALKEFEEAAD--IMVSTDAGGEGLNLQF-CHIVINYDMPWNPMKIEQRIGRVD--- 560 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI---------QDLLLNALKK 200 + G + VFV+ I + TI+ V + L K + +L++ + Sbjct: 561 --RIGQTKDVFVFNFILEETIENRVRKVLEEKLEVIFRELGIDKMSDVLDSFEA 612 >gi|74217234|dbj|BAC32913.2| unnamed protein product [Mus musculus] Length = 1323 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 61/165 (36%), Gaps = 19/165 (11%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 + QL E + K++AL ++++K + +++ L L+ Sbjct: 755 QLQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFL 814 Query: 89 PQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + ++ +N + +I S G+NL + +VF+ Sbjct: 815 NFHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINL-VEADTVVFYDN 873 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + +++ + G + + +Y L++ N+I+E +L+ Sbjct: 874 DLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 913 >gi|258652709|ref|YP_003201865.1| helicase domain-containing protein [Nakamurella multipartita DSM 44233] gi|258555934|gb|ACV78876.1| helicase domain protein [Nakamurella multipartita DSM 44233] Length = 217 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 32/103 (31%), Gaps = 6/103 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + G++ LL + G G+ L G W Sbjct: 80 PGADRTRLCDAYQAGRLSLLVCSIPTIGVGVTLTRGC------DAWMAETSWTPSEISQA 133 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RQ + G R V V I T+DE V L K+ D +L Sbjct: 134 EDRQWRRGQSRDVVVTTFIGVGTLDERVQDSLARKADDLDQVL 176 >gi|45659042|ref|YP_003128.1| ATP-dependent RNA helicase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602288|gb|AAS71765.1| ATP-dependent RNA helicase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 948 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 65/161 (40%), Gaps = 18/161 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDK 96 K ++ K+K + ++K + I+ F + ++ K Sbjct: 458 KIKEDKKSIKLKETILKLQKEGHSKFIIFTQFRTTQDFLASVLSDFQVTLFHGSLSADAK 517 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ + +I + G G NLQ+ N+L + L W + +Q I RI Sbjct: 518 EKAIVEFKTKTEI---LICTEAGGEGRNLQF-ANVLFNYDLPWSPLKIEQRIGRI----- 568 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K VF++ +++T+ E +L+ L K + + + + Sbjct: 569 HRFGQKDNVFIFNFASKDTVAERILEVLTNKIRLFEESIGS 609 >gi|323136172|ref|ZP_08071254.1| SNF2-related protein [Methylocystis sp. ATCC 49242] gi|322398246|gb|EFY00766.1| SNF2-related protein [Methylocystis sp. ATCC 49242] Length = 1027 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 61/213 (28%), Gaps = 34/213 (15%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVIIEKA- 66 + L + A + ++ + + ++ A I+ + Sbjct: 767 DDARLKLARGGLGA--ALKTLHHIRSVSVHPSLDAKACDADYIGASARLSATFEILRRIA 824 Query: 67 -NAAPIIVAYHFNSDLARLQ------------KAFPQGRTLDKDPCTIQEWN-----EGK 108 +V R + K + + + Sbjct: 825 AKGERALVFIEHRQMQHRFIELARAEFGLSRIDLINGDTPIPKRQAIVNRFQQHLEEDRG 884 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L P + G GL L ++ S WW+ +Q +R+ + G R V ++ Sbjct: 885 FDILVLGPKAAGVGLTLTA-ATHVIHLSRWWNPAVEEQCNDRV-----HRLGQTRPVSIH 938 Query: 169 YLIA------QNTIDELVLQRLRTKSTIQDLLL 195 +A +N+ D L+ ++ K + L Sbjct: 939 LPMAIHPGYRENSFDCLLQSLMQRKRKLASSAL 971 >gi|149634328|ref|XP_001510861.1| PREDICTED: similar to E1A binding protein p400 [Ornithorhynchus anatinus] Length = 3116 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 62/167 (37%), Gaps = 19/167 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 + Q+ + + + K++AL V+++K + +++ L L+ Sbjct: 1838 LQQLRQITALRLLQFPDLRLVQYDSGKLEALAVLLQKLKSEGRRVLILSQMMLMLDILEM 1897 Query: 87 AFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + ++ +N + +I S G+NL + +VF+ Sbjct: 1898 FLNFHYLTYIRVDENANSEQRLELMKSFNRDKRIFCAIISTHSRSTGVNL-VEADTVVFY 1956 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + +++ + G + + +Y L++ N+I+E +L+ Sbjct: 1957 DNDLNP-----VMDAKAQEWCERIGRCKDIHIYRLVSGNSIEEKLLK 1998 >gi|24216735|ref|NP_714216.1| ATP-dependent RNA helicase [Leptospira interrogans serovar Lai str. 56601] gi|24198088|gb|AAN51234.1|AE011558_10 ATP-dependent RNA helicase [Leptospira interrogans serovar Lai str. 56601] Length = 948 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 65/161 (40%), Gaps = 18/161 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDK 96 K ++ K+K + ++K + I+ F + ++ K Sbjct: 458 KIKEDKKSIKLKETILKLQKEGHSKFIIFTQFRTTQDFLASVLSDFQVTLFHGSLSADAK 517 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ + +I + G G NLQ+ N+L + L W + +Q I RI Sbjct: 518 EKAIVEFKTKTEI---LICTEAGGEGRNLQF-ANVLFNYDLPWSPLKIEQRIGRI----- 568 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K VF++ +++T+ E +L+ L K + + + + Sbjct: 569 HRFGQKDNVFIFNFASKDTVAERILEVLTNKIRLFEESIGS 609 >gi|68011272|ref|XP_671073.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56486917|emb|CAI01503.1| hypothetical protein PB300236.00.0 [Plasmodium berghei] Length = 220 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L + G GLNL + + LWW+ IE R + G + V Sbjct: 106 NESGKVLLCSLKAGGVGLNLT-VSSKVYLMDLWWNPA-----IEDQAFERIHRIGQLKDV 159 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +Y + + T++E +LQ ++K + L Sbjct: 160 NIYKFVLEKTVEERILQIHQSKQYTANQCL 189 >gi|71659675|ref|XP_821558.1| DNA repair protein [Trypanosoma cruzi strain CL Brener] gi|70886941|gb|EAN99707.1| DNA repair protein, putative [Trypanosoma cruzi] Length = 983 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 52/156 (33%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL----------DKDPCTIQ 102 + E I+ II+ F L +Q + + +Q Sbjct: 815 SKLDAIAEYILSVPKDEKIIIFSQFGDMLELIQIWLQRASVKAVKLTGSLMLSQRQAVLQ 874 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + ++ + + + G GLNLQ N ++ WW+ R + G Sbjct: 875 AFLHDPGVRAILISLKAGGEGLNLQ-VANHVILVDPWWNPAVEM-----QAAQRAHRIGQ 928 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V V + + +++E ++ K + + ++ Sbjct: 929 TKPVRVVRFVVERSVEERMMDLQDKKMLVIEGTIDG 964 >gi|325120317|emb|CBZ55871.1| putative helicase conserved C-terminal domain-containing protein [Neospora caninum Liverpool] Length = 2877 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 10/130 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---PCTIQEWNEGKIPLLF 113 + ++I+ + + + F + R++ + DK + + +L Sbjct: 2549 RCPKIIVASSLWENLFLLGCF-LEKHRVKCCHFYEKMQDKRNRVDALKSFQQDTETMVLL 2607 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 HGL+L + ++ D QQ+I R + G R V V I + Sbjct: 2608 LSTQLGAHGLDL-SCASHVLLPDPPTDPNVEQQVISR-----AHRMGALRDVHVEIFILK 2661 Query: 174 NTIDELVLQR 183 +T++E +LQ Sbjct: 2662 DTVEETILQL 2671 >gi|160944382|ref|ZP_02091610.1| hypothetical protein FAEPRAM212_01892 [Faecalibacterium prausnitzii M21/2] gi|158444164|gb|EDP21168.1| hypothetical protein FAEPRAM212_01892 [Faecalibacterium prausnitzii M21/2] Length = 2409 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 4/115 (3%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + T +K + G++ +L A G G N+Q + + W Sbjct: 2018 QEIEFIHNADTENKKAELFSKVRSGQVRVLLGSTAKMGAGTNVQTLLVAVHHLDVGWRPS 2077 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q RI Q + V+VY + ++T D + Q L K ++ + Sbjct: 2078 DMTQRNGRIIR----QGNQNKQVYVYNYVTESTFDAYLYQTLENKQKFISQIMTS 2128 >gi|12859719|dbj|BAB31751.1| unnamed protein product [Mus musculus] Length = 350 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 28/45 (62%) Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1 MDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 45 >gi|7023894|dbj|BAA92122.1| unnamed protein product [Homo sapiens] Length = 350 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 28/45 (62%) Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1 MDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 45 >gi|295697398|ref|YP_003590636.1| helicase domain protein [Bacillus tusciae DSM 2912] gi|295413000|gb|ADG07492.1| helicase domain protein [Bacillus tusciae DSM 2912] Length = 1314 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 66/172 (38%), Gaps = 8/172 (4%) Query: 27 SKTVKCLQLANGAV-YYDEEKHWKEVHDEKIKALEVII-EKANAAPIIVAYHFNSDLARL 84 SK + L + NG + L I+ AAP + ++ A Sbjct: 772 SKMKRLLGILNGRKDPVSGRFRQTVIFTRFYDTLRDILSHLRQAAPRMRIGTYSGKGAEW 831 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 GR + + +G+I +L + GLNLQ ++L+ F L W+ + Sbjct: 832 FAPDAGGRGEADREEIKERFLQGEIDILLCT-DAAAEGLNLQT-ADMLINFDLGWNPMKI 889 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q I RI QR +FV L + +E+V RL + +L++ Sbjct: 890 EQRIGRIDRIGQRHP----EIFVVNLCYAGSEEEVVYGRLLQRLEQANLVVG 937 >gi|121707834|ref|XP_001271954.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1] gi|119400102|gb|EAW10528.1| SNF2 family helicase, putative [Aspergillus clavatus NRRL 1] Length = 1190 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 55/146 (37%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 ++II + + L + + T + + +I + Sbjct: 903 KIIIFYDSTNSAVWIAEGLDLLGIEYRMYTSTLTPQQRSSYFNLFRYNEEIRVFLMDLNQ 962 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + F + Q IE + R + G R V+V L+ ++T+++ Sbjct: 963 ASHGLHI-ANASRVFFVNP-----VWQPNIESQAIKRAHRIGQTRPVYVETLVLKDTLED 1016 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L+R + + D + +K+ + Sbjct: 1017 RMLKR---RKAMSDQEMQEAEKDPLD 1039 >gi|55376574|ref|YP_134426.1| putative DEAD/H helicase [Haloarcula marismortui ATCC 43049] gi|55229299|gb|AAV44720.1| putative DEAD/H helicase [Haloarcula marismortui ATCC 43049] Length = 1212 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 8/145 (5%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 I + ++ +++ +G +L Sbjct: 800 YHDTLEHIRETLTDTHPNVGTYSGGGGMQYDETTGEWVNVGKEAIKRDFTDGDTNILICT 859 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF-VYYLIAQN 174 S GLNLQ + L+ F L W+ +Q I RI + G K V + ++ Sbjct: 860 -DSASEGLNLQT-ADALINFDLPWNPMRVEQRIGRID-----RIGQKNEVVKIINYAYKD 912 Query: 175 TIDELVLQRLRTKSTIQDLLLNALK 199 +ID + + L + + + ++ ++ Sbjct: 913 SIDGDIYEELEGRLQLFENVVGPMR 937 >gi|320588854|gb|EFX01322.1| DNA repair and recombination protein rad5c [Grosmannia clavigera kw1407] Length = 852 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 6/122 (4%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 ++A H R + + + + + +L + G GLNL N Sbjct: 726 LLASHLKDAGIRYLRVDGSLTNRVRQDSLREFAQDADVRVLIMTTGTGGIGLNLT-CANR 784 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + W+ +E + R + G + V V + ++T +E +L + K + Sbjct: 785 IFLVEPQWNPG-----VESQAIARAIRLGQESEVLVTRYLVEDTEEEAILAQQIGKKRLA 839 Query: 192 DL 193 + Sbjct: 840 AM 841 >gi|327474192|gb|EGF19600.1| SNF2 family protein [Streptococcus sanguinis SK408] Length = 2077 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 6/122 (4%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + +K ++ N G++ +L A G GLN+Q + + W Sbjct: 1701 MEIAFVHDANSDEKKNSLSRKVNAGEVRVLLASTEKGGTGLNVQSKMKAVHHLDVPWRPS 1760 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + QQ RI Q + V +Y+ I + + D + K ++ + KE Sbjct: 1761 DIQQRNGRIIR----QGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQIMTS--KEP 1814 Query: 203 IH 204 I Sbjct: 1815 IR 1816 >gi|156741590|ref|YP_001431719.1| helicase domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156232918|gb|ABU57701.1| helicase domain protein [Roseiflexus castenholzii DSM 13941] Length = 1129 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 8/122 (6%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D G LD + + + ++ A A+ G+NLQ+ ++++ + + Sbjct: 512 MRDWGYRVCTIHGGMPLDARIEAEKTFKN-EAQVMVATEAAG-EGINLQF-CHLMINYDI 568 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ +Q + RI + G R V ++ L+A +T + VL RL K L + Sbjct: 569 PWNPNRLEQRMGRI-----HRYGQTREVTIFNLVAADTREGRVLHRLFEKLDEIRSALGS 623 Query: 198 LK 199 + Sbjct: 624 DR 625 >gi|291391484|ref|XP_002712469.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Oryctolagus cuniculus] Length = 1062 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCT 100 K A++ I+ + F L+ + Sbjct: 287 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVPSSERIRL 346 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ + + + G GL + +VF L+WD + R + Sbjct: 347 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRI 400 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K+ Sbjct: 401 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKERL 443 >gi|294676841|ref|YP_003577456.1| SNF2 family helicase [Rhodobacter capsulatus SB 1003] gi|294475661|gb|ADE85049.1| helicase, SNF2 family [Rhodobacter capsulatus SB 1003] Length = 1030 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 61/220 (27%), Gaps = 38/220 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALE 60 + Y L A + ++ + + ++ A Sbjct: 766 QVYDA----ARLQLASGTPGA--ALKLLHHIRTVSVHPALGSYGADAEFIAASARLSATF 819 Query: 61 VIIEKAN--AAPIIVAYHFNSDLARLQKA------------FPQGRTLDKDPCTIQEWNE 106 I+ + +V R + + + + + Sbjct: 820 DILRQIRARGERALVFIENRQMQYRFIEIARAEFGLARIDLINGDTPIAQRQQIVNRFQA 879 Query: 107 -----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 G LL P + G GL L ++ S WW+ +Q +R+ + G Sbjct: 880 HLEDGGGFDLLVLGPKAAGTGLTLTA-ATHVIHLSRWWNPAVEEQCNDRV-----HRLGQ 933 Query: 162 KRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLLL 195 R V ++ +A ++ D L+ ++ K + L Sbjct: 934 TRPVQIHVPMAIHPGYRAHSFDCLLHTLMQRKRRMASAAL 973 >gi|225419973|ref|ZP_03762276.1| hypothetical protein CLOSTASPAR_06314 [Clostridium asparagiforme DSM 15981] gi|225041395|gb|EEG51641.1| hypothetical protein CLOSTASPAR_06314 [Clostridium asparagiforme DSM 15981] Length = 421 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 23/198 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y KF R+ + G SK + + + ++ ++ A + Sbjct: 234 KEYRKFMRDAIITIDGREYIGDTILSKRIYARMMCS------------YLNKGRVAAFKD 281 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKA----FPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 +++ +IV Y+FN +L +Q+A ++ + + E + F Sbjct: 282 LVQSTE-ERLIVFYNFNEELNTMQEAIAELERPISIVNGSFKDLTAYEEASDSITFVQYQ 340 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLNLQ N +++FS+ E +Q +RI + G K+ F Y +I T++ Sbjct: 341 AGAMGLNLQK-ANRIIYFSMTDRSELFEQSKKRI-----HRIGQKKPCFYYQMICPGTVE 394 Query: 178 ELVLQRLRTKSTIQDLLL 195 E +L L + D L Sbjct: 395 EDILHTLELRKDYTDELF 412 >gi|302839751|ref|XP_002951432.1| hypothetical protein VOLCADRAFT_91908 [Volvox carteri f. nagariensis] gi|300263407|gb|EFJ47608.1| hypothetical protein VOLCADRAFT_91908 [Volvox carteri f. nagariensis] Length = 1592 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 19/167 (11%), Positives = 51/167 (30%), Gaps = 32/167 (19%) Query: 30 VKCLQLANGAVYYDEE------KHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 + ++ N + K+ L+ ++ K + +++ L Sbjct: 987 TELRKVCNHPLISYRMDEAWGGGPEVLTQCGKMMVLDRLLVKFFYSGHRVLLFSTMTKFL 1046 Query: 82 ARLQKAFPQGRTLDKD----------------PCTIQEWN--EGKIPLLFAHPASCGHGL 123 ++ + + I+++N + I + + G GL Sbjct: 1047 DLMEVYLMWRQLPNGRRMLFRRIDGSTPLEIREDAIRDFNRPDSDIFIFLLSIRAAGRGL 1106 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 NLQ + ++ + + + E + R + G + V V + Sbjct: 1107 NLQT-SDTVIIYDPDPNPKN-----EEQAIARSHRIGQTKEVRVVHF 1147 >gi|221127791|ref|XP_002156270.1| PREDICTED: similar to Zinc finger, RAN-binding domain containing 3 [Hydra magnipapillata] Length = 576 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 8/166 (4%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR- 92 QL K + D + ++ A +++ G Sbjct: 314 QLFCDTALAKAGAVQKYICDLIDGMPNKFLVFCFHMTMVQAIQETLVQKKVKYICITGSV 373 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ + + + + GL L + +VF L Sbjct: 374 PPVQRGHLVETFQSNKEYRVAILSIQAASTGLTLTA-ADHVVFAELHHTPGVLL-----Q 427 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G K AV ++YL+AQ TID+++ L+ K + LN Sbjct: 428 AEDRCHRIGQKNAVQIHYLLAQGTIDDILWTMLQRKVMVTTAALNG 473 >gi|188536006|ref|NP_001120938.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Danio rerio] gi|221222756|sp|B2ZFP3|SMAL1_DANRE RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|187373311|gb|ACD03327.1| Smarcal1 [Danio rerio] Length = 807 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 68/219 (31%), Gaps = 35/219 (15%) Query: 5 HKFQRELYCDLQGEN----------IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-- 52 + + E+ L + I + A+ +LA G +EK V Sbjct: 548 RRLKSEVLSQLPAKQRKVVTVTTDGINSRTKAALNAAARELAKGYHNKSQEKEALLVFFN 607 Query: 53 ---DEKIKALEVIIE---KANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDK 96 + KI+A+ I + +V H L + Sbjct: 608 HTAEAKIRAIMEYISDMLECGREKFLVFAHHKLVLDSITKELGEKSISFIRIDGSTPSAE 667 Query: 97 DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + + + GL L ++VF L+W+ R Sbjct: 668 RQLLCERFQASQQSCVAVLSITAANMGLTLHSAA-LVVFAELFWNPGVLI-----QAEDR 721 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G V ++YL+A+ T D+ + ++ K + + + Sbjct: 722 VHRIGQTSNVDIHYLVAKGTADDYLWPMIQAKMNVLEQV 760 >gi|297159169|gb|ADI08881.1| putative DNA-binding protein [Streptomyces bingchenggensis BCW-1] Length = 605 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 75/240 (31%), Gaps = 43/240 (17%) Query: 2 KQYHKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVY-YDEEKHWKEVH------ 52 + Y + ++ N EA A+ + L A + +H Sbjct: 341 EIYDALKGRFSPRAEVDKTNFEALGKAAL--RLLMAATSPALLVAGSTRHEPLHFRVPPL 398 Query: 53 --------------------DEKIKALEVIIEKAN--AAPIIVAYHFNS-------DLAR 83 K + I+ +V F LA Sbjct: 399 EIPEGHPLSALLRQLPDYELSPKYQEALSIVSANAARGRKTLVWTSFVRSITSLQALLAP 458 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 Q A G T D+ + ++ +L ++PA+ G G++L + V+ + Sbjct: 459 FQPAAVHGGTPDRAAELHRFRDDRDCAVLISNPATLGEGISLHQVCHDAVYVDRDFQAGR 518 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + Q ++RI + L AQ ++D++V RL K +L+ + + + Sbjct: 519 YLQSLDRIHRLG---LAPDTKTRITVLAAQGSVDDIVAMRLAKKLDFMGRILDDPEVQQL 575 >gi|15228256|ref|NP_188282.1| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidopsis thaliana] Length = 638 Score = 62.5 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 42/164 (25%), Gaps = 12/164 (7%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 + + + I + +VA + Sbjct: 435 CHSQLKHDVVFTESAVRSCINDYDD----PEDKNALVASRRVYFIENPSCDRDSSVACRA 490 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNL---QYGGNILVFFSLWWDLEEHQQMIERIGV 153 + I L NL + ++ LWW+ E + Sbjct: 491 RQSRHSTNKDNSISGLVCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTT-----EDQAI 545 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G RAV V + +NT++E +L K I L Sbjct: 546 DRAHRIGQTRAVTVTRIAIKNTVEERILTLHERKRNIVASALGE 589 >gi|294083751|ref|YP_003550508.1| hypothetical protein SAR116_0181 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663323|gb|ADE38424.1| hypothetical protein SAR116_0181 [Candidatus Puniceispirillum marinum IMCC1322] Length = 1130 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 68/202 (33%), Gaps = 33/202 (16%) Query: 18 ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVIIEKANAAP-----I 71 IEA ++ + V +++ + + ++ I+E+ + Sbjct: 784 SMIEALHAFKSIS-LHPI--SPVQFEQFSIDEYIKASARLSKTFEILERIHKQNEKVLIF 840 Query: 72 IVAYHFN---SDLARLQKAFPQGR-------TLDKDPCTIQEWNEGKI--PLLFAHPASC 119 + + F + L R + + + + + I ++ P + Sbjct: 841 LESRKFQVVLASLVREKFKMDHSPLIINGLISGEARQERVNTFQSNPIGFDVMIISPKAG 900 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN----- 174 G GL L N ++ WW+ Q +R + G + V VY IA+N Sbjct: 901 GVGLTLTA-ANNVIHLERWWNPAVEDQCTDR-----AYRIGQTKTVNVYTPIAKNGSFGE 954 Query: 175 -TIDELVLQRLRTKSTIQDLLL 195 + D ++ + L K +I L Sbjct: 955 KSFDCILDRLLNEKRSIAKGLF 976 >gi|257438349|ref|ZP_05614104.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] gi|257199180|gb|EEU97464.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] Length = 2422 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 4/115 (3%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + T +K + G++ +L A G G N+Q + + W Sbjct: 2025 QEIEFIHNADTENKKAELFSKVRSGQVRVLLGSTAKMGAGTNVQTLLVAVHHLDVGWRPS 2084 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q RI Q + V+VY + ++T D + Q L K ++ + Sbjct: 2085 DMTQRNGRIIR----QGNQNKQVYVYNYVTESTFDAYLYQTLENKQKFISQIMTS 2135 >gi|146087881|ref|XP_001465933.1| helicase [Leishmania infantum JPCM5] gi|134070034|emb|CAM68366.1| putative helicase-like protein [Leishmania infantum JPCM5] Length = 1273 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 47/127 (37%), Gaps = 11/127 (8%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + + +++++ P L + G G+ + ++ + Sbjct: 858 RRIRYCRLDGSHSAAQRAAMLEDFDRPDGPELFLLSTKAGGVGITVTA-ATRVILVDTSF 916 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL-QRLRTKSTIQDLLLN-- 196 + + Q + R + G R V+VY L T++ + Q+L K + ++ Sbjct: 917 NPADDQ-----QAIGRAYRYGQTRPVYVYRLTCYPTLEYSIFVQKLA-KEWLFKTVIEES 970 Query: 197 ALKKETI 203 ++K++ + Sbjct: 971 SVKRDGL 977 >gi|146281859|ref|YP_001172012.1| helicase, putative [Pseudomonas stutzeri A1501] gi|145570064|gb|ABP79170.1| helicase, putative [Pseudomonas stutzeri A1501] gi|327480090|gb|AEA83400.1| helicase, putative [Pseudomonas stutzeri DSM 4166] Length = 1012 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 71/241 (29%), Gaps = 43/241 (17%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--------- 51 ++ Y + ++ + + ++ DE + Sbjct: 774 LQVYDDVLDGYRARRASADDMRGSALAALTQLRSVSLHPRLDDEPSLYSRDGHHARQLMS 833 Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------------- 92 K+ + ++++ +I+ L+ Q Sbjct: 834 ESGKLAVMLKLLDEIRDKGEKVILFMMTKRLQRVLKLWLDQIYGLDIAVINGDTKAVATK 893 Query: 93 -TLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 I + +L P + G GL G N +V W+ + E Sbjct: 894 AEEMTRKKLISAFEAKSGFNVLVMSPVAAGVGLT-VVGANHVVHLERHWNPAK-----EA 947 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQ----NTIDELVLQRLRTKSTIQDLLL--NAL-KKETI 203 R + G ++ VF++ ++ D + + LR K ++D ++ A+ + E I Sbjct: 948 QASDRVYRIGQQKEVFIHLPAVTHPQFDSFDVHLDRLLRGKLMLKDAVVTPEAVSESEMI 1007 Query: 204 H 204 H Sbjct: 1008 H 1008 >gi|11994614|dbj|BAB02751.1| unnamed protein product [Arabidopsis thaliana] Length = 653 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 6/93 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N+ + + + GLN+ + ++ LWW+ E + R + G RA Sbjct: 518 NDYETGAMLMSLKAGNLGLNMVA-ASHVILLDLWWNPTT-----EDQAIDRAHRIGQTRA 571 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V V + +NT++E +L K I L Sbjct: 572 VTVTRIAIKNTVEERILTLHERKRNIVASALGE 604 >gi|221057618|ref|XP_002261317.1| DNA helicase [Plasmodium knowlesi strain H] gi|194247322|emb|CAQ40722.1| DNA helicase, putative [Plasmodium knowlesi strain H] Length = 875 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 9/146 (6%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCG 120 ++ + + F ++ + +DK I+ N+ KI + +CG Sbjct: 634 LLFCHHKLVMDEIDKFLTEKKCMFIRIDGLTPIDKRELYIKSFQNDDKIKIALLSLTACG 693 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF-VYYLIAQNTIDEL 179 GLNL N +VF L+W + R + G V ++YLIAQ TIDE Sbjct: 694 LGLNLTA-ANTVVFGELYWVPGQII-----QAEDRAHRIGTTHEVINIHYLIAQKTIDET 747 Query: 180 VLQRLRTKSTIQDLLLNALKKETIHV 205 V + + K LN ++ ++++V Sbjct: 748 VWRIINRKWNTLTTALNGME-DSLNV 772 >gi|168046653|ref|XP_001775787.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162672794|gb|EDQ59326.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 657 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 19/156 (12%) Query: 55 KIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQ 102 K+ A++ + +V H S L +++ + G + Sbjct: 498 KLPAVQEYLTTMIDAECKFLVFAHHQSMLDGIEQLLMKKKVGLIRIDGGTPQSARQALVT 557 Query: 103 EWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + I + G GL L + ++F + W + R + G Sbjct: 558 RFQENDNIIAAVLGIRAAGVGLTLTA-ASTVIFAEMSWTPGDLV-----QAEDRAHRIGQ 611 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +V VYYL A +TID+++ ++ K +L+ Sbjct: 612 ASSVNVYYLHAHDTIDDIIWDTVQNKLENLSQVLDG 647 >gi|219848036|ref|YP_002462469.1| helicase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219542295|gb|ACL24033.1| helicase domain protein [Chloroflexus aggregans DSM 9485] Length = 966 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 42/119 (35%), Gaps = 8/119 (6%) Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + Y F + + + + + G GLNLQ+ +++ Sbjct: 516 MLYEFLTQRGFTVVCLNGAMDMAARKQVQDAFANNAR--ILISTDAGGEGLNLQF-CHVV 572 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + + + W+ +Q I R+ + G V + Q++++ + + L K + Sbjct: 573 INYDIPWNPMRLEQRIGRVD-----RIGQTHTVRAVNFVFQDSVEHRIREVLEQKLAVI 626 >gi|85859510|ref|YP_461712.1| snf2-related protein with C-terminal helicase [Syntrophus aciditrophicus SB] gi|85722601|gb|ABC77544.1| snf2-related protein with C-terminal Helicase [Syntrophus aciditrophicus SB] Length = 1178 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 68/207 (32%), Gaps = 23/207 (11%) Query: 5 HKFQRELYCDLQ----GENIEAFNSAS-KTVKCLQLANG---AVYYDEEKHWKEVHDEKI 56 + E L+ I A + + + AN A + + K Sbjct: 457 DQLADEYTAALELEQLRAEISALRELVEQARRVREDANDSKLAALKKCLGEAQFLE-LKD 515 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 +++I + + G + + + G + A Sbjct: 516 GRGKLLIFTEHRDTLGYVRDHLERWGFSTCEIHGGMNPHERKRAQEVFRTGA-QVCIATE 574 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT- 175 A+ G+NLQ+ ++++ + + W+ +Q + RI + G R V+ + +A ++ Sbjct: 575 AAG-EGINLQF-CHLMINYDMPWNPTRLEQRLGRI-----HRIGQDRDVYAFNFVATDSE 627 Query: 176 -----IDELVLQRLRTKSTIQDLLLNA 197 ++ +L RL K + L Sbjct: 628 DGQPIVEGRILHRLLEKLDQMNEALEG 654 >gi|304314696|ref|YP_003849843.1| helicase domain related protein [Methanothermobacter marburgensis str. Marburg] gi|302588155|gb|ADL58530.1| helicase domain related protein [Methanothermobacter marburgensis str. Marburg] Length = 774 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 18/155 (11%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSD----------LARLQKAFPQGRTLDKDPCTIQEW 104 K+ L+ I+E+ I++ G ++D+ ++ Sbjct: 164 KLMELQKILEEIGHEKILIFSESKDTVDYLLEKIESWGYSVCTIHGGMSMDERIAAEDDF 223 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 K ++ A A+ G+NLQ+ +I+V + + W+ +Q + RI + +R Sbjct: 224 RRNK-QVMVATEAAG-EGINLQF-CHIMVNYDIPWNPNRLEQRMGRI-----HRYKQRRD 275 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V +Y L+A NT + LV++RL K + + K Sbjct: 276 VHIYNLVAGNTREGLVMRRLLEKLDSIRQDIGSDK 310 >gi|297624923|ref|YP_003706357.1| helicase domain-containing protein [Truepera radiovictrix DSM 17093] gi|297166103|gb|ADI15814.1| helicase domain protein [Truepera radiovictrix DSM 17093] Length = 1091 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 65/158 (41%), Gaps = 19/158 (12%) Query: 53 DEKIKALEVIIEK-ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTI 101 D K+ L+ I++ N +++ L + L++ Sbjct: 467 DRKLTELQKILQSLPNGEKLLIFTEHKDTLTFIMRVLGKRGYTATSIDGSMRLEERIAAE 526 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + ++ A A+ G+NLQ+ +++V + + W+ +Q + R+ + G Sbjct: 527 RAFRDS-CRVMVATEAAG-EGINLQF-CSVMVNYDIPWNPTRLEQRMGRV-----HRYGQ 578 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + V +Y L+AQ T + VL RL TK L + + Sbjct: 579 RYDVRIYNLVAQGTREGDVLGRLLTKLEAMREQLGSDR 616 >gi|154274738|ref|XP_001538220.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150414660|gb|EDN10022.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 996 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 21/56 (37%) Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E + R + V +Y L +NT++E ++ K + + + Sbjct: 854 SHIGYFVEEQAIDRVHRLNQTVDVKIYKLTIKNTVEERIVGLQERKRELANATIEG 909 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 15/43 (34%), Gaps = 4/43 (9%) Query: 4 YHKFQ----RELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 Y + + + L + +NI ++ ++ Q N Sbjct: 549 YKRLEQRTDKTLERMIGDDNINYASALVLLLRLRQACNHPDLV 591 >gi|25011394|ref|NP_735789.1| hypothetical protein gbs1352 [Streptococcus agalactiae NEM316] gi|24412932|emb|CAD47011.1| Unknown [Streptococcus agalactiae NEM316] Length = 2066 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + QQ Sbjct: 1693 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQARMKAVHHLDVPWRPSDIQQ 1752 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + K ++ + Sbjct: 1753 RNGRLIR----QGNQHQNVEIYHYITKGSFDNYLWATQENKLRYIKQIMTS 1799 >gi|323455831|gb|EGB11699.1| hypothetical protein AURANDRAFT_1193 [Aureococcus anophagefferens] Length = 453 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 9/112 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ N+ K+ + G GL L + ++F L W Sbjct: 348 PPAERQRLVESFQNDPKVRCALLSVTAAGVGLTLTA-ASAVLFAELHWTPGVLV-----Q 401 Query: 152 GVTRQRQAGFKRAVFVYYLIA---QNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G + +V V+YL+ ++++D + + + K ++ L+ KK Sbjct: 402 AEDRAHRIGQRSSVNVHYLVLKDEKDSVDMALWRSIARKVSVVGAALDGAKK 453 >gi|332019805|gb|EGI60266.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Acromyrmex echinatior] Length = 693 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 9/194 (4%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 + ++ + ++ + +Q + + + + V + + I+ + Sbjct: 439 DKQMREMSQQLQTNISALERHNALIQYYSQSSHARVKAVRNYVTNLFKNKKKCILYGHHQ 498 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQY 127 + + + + ++ I ++ E + + G+ L Sbjct: 499 IILDAICEAAESVDIVYIRIDGKTSSEQRQLLIDKFQECDECLAAVLSITAVNTGVTLTA 558 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 N++VF L+W+ R + G V + YLIAQNT D+ + L K Sbjct: 559 -ANLVVFTELFWNPGILS-----QAEDRVHRIGQNNIVTIQYLIAQNTADDYIWPLLNKK 612 Query: 188 STIQDLLLNALKKE 201 I + + LK++ Sbjct: 613 KDILNAV--GLKQD 624 >gi|307110121|gb|EFN58358.1| hypothetical protein CHLNCDRAFT_142431 [Chlorella variabilis] Length = 713 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + ++ + + GL L + + + Q V R + G +R V Sbjct: 596 DDEVRVFLLSHKAGAQGLTL-VRASHVFLLEPALEPAIEQ-----QAVARVHRIGQQRPV 649 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQD 192 V L+ + +I+ VL K + Sbjct: 650 VVTRLLVKESIEHRVLAVQEAKHALFA 676 >gi|307127309|ref|YP_003879340.1| SNF2 family protein [Streptococcus pneumoniae 670-6B] gi|306484371|gb|ADM91240.1| SNF2 family protein [Streptococcus pneumoniae 670-6B] Length = 2074 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 6/118 (5%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +K ++ N G++ +L A G GLN+Q + + W + QQ Sbjct: 1702 FVHDANSDEKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQ 1761 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 RI Q + V +Y+ I + + D + K ++ + KE I Sbjct: 1762 RNGRIIR----QGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQIMTS--KEPIR 1813 >gi|227543556|ref|ZP_03973605.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] gi|227186396|gb|EEI66467.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] Length = 73 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 5/69 (7%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L L+ K Q Sbjct: 2 LIWYGLTWSLELYQQTNARLW-----RQGQRQPVVIHHIITEGTIDENILAALKRKDKTQ 56 Query: 192 DLLLNALKK 200 L+NA+K Sbjct: 57 LALINAVKA 65 >gi|218531254|ref|YP_002422070.1| non-specific serine/threonine protein kinase [Methylobacterium chloromethanicum CM4] gi|218523557|gb|ACK84142.1| Non-specific serine/threonine protein kinase [Methylobacterium chloromethanicum CM4] Length = 1033 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 56/200 (28%), Gaps = 32/200 (16%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALEVII--EKANAAPIIVAYHFN 78 A + ++ E + ++ A+ I+ +V Sbjct: 784 AGAAFKMLHHIRTVSVHPNLDGAETDSAFLEASARLSAVFEILGVIAERRERALVFVEHR 843 Query: 79 SDLAR------------LQKAFPQGRTLDKDPCTIQEWN-----EGKIPLLFAHPASCGH 121 R + + + + E +L P + G Sbjct: 844 RMQHRLVELARARFNLPRVDLINGDTPISRRQAIVNRFQRHLEGEPAFDVLVLGPKAAGT 903 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA------QNT 175 GL L ++ S WW+ +Q +R+ + G R V ++ +A + + Sbjct: 904 GLTLTA-ATHVIHLSRWWNPAVEEQCNDRV-----HRLGQTRPVTIHVPMAIHAGYREGS 957 Query: 176 IDELVLQRLRTKSTIQDLLL 195 D L+ + K + L Sbjct: 958 FDCLLHGLMHRKRRLAASAL 977 >gi|30044094|ref|NP_835691.1| similar to DNA helicase [Rhodothermus phage RM378] Length = 670 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 23/200 (11%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAV-------YYDEEKHWKEVHDEKIKALEVI 62 E + + F ++ + + EE+ V + I Sbjct: 380 EAMAEFDEKMKVMFERVAEMRRFYAIHKAPFAADYIVSLVKEEEVDGLVVFAHHHDVFEI 439 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I+K A I + + + ++++ GK+ ++ + G G Sbjct: 440 IQKVLEAKGITYARITGE-----------ENVVQRQKAVEDFQSGKVDVVLCSILAAGVG 488 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + L VF L W Q +R+ Q V ++Y++A++T+DE Sbjct: 489 ITLTR-AKTAVFVELDWVPGNILQAEDRLHRIGQ----EAECVDIHYIVARHTLDENFAD 543 Query: 183 RLRTKSTIQDLLLNALKKET 202 L K I + LN + +T Sbjct: 544 YLTRKIEIIEKALNHERMKT 563 >gi|323454846|gb|EGB10715.1| hypothetical protein AURANDRAFT_62160 [Aureococcus anophagefferens] Length = 734 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 6/97 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQ-YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 N+ + A G+ L G + L+ F W+ + + R + G R Sbjct: 568 NDPDGGVFLLLLALKAGGVGLTLTGASRLILFEPSWNPAD-----DDQAAARVWRDGQTR 622 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 F+Y L ++++E VL+R K + + +A ++ Sbjct: 623 PTFIYTLATAHSLEEHVLKRQAAKRNLAGRVRHAQRE 659 >gi|238482351|ref|XP_002372414.1| helicase, putative [Aspergillus flavus NRRL3357] gi|220700464|gb|EED56802.1| helicase, putative [Aspergillus flavus NRRL3357] Length = 941 Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 17/135 (12%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQEWN-EGKIPLLFAHPAS 118 I+ + L + K R + + ++ +P+L + Sbjct: 789 KSIIFSCWTRTLDLIAKHLKASRIEFERIDGKTSTSQRQKILDRFDGTRTVPVLIMTTGT 848 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLNLQ N + W+ +E + R + G ++ V V +N+I+E Sbjct: 849 GAFGLNLQSV-NRVFIVEPQWNPS-----VESQAIARAIRLGQEQQVLVTRYRVENSIEE 902 Query: 179 LVLQRLRTKSTIQDL 193 + + K I + Sbjct: 903 AMCSQQTHKLKISQM 917 >gi|224101205|ref|XP_002312184.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222852004|gb|EEE89551.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1234 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 60/160 (37%), Gaps = 8/160 (5%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 V + ++ V +EK+ I + F + L + Sbjct: 1038 VMFVLNLVYRVVKNEKVLIFCHNIAPIKLFLELFENIFRWQQGKEILVLTGELELFERGR 1097 Query: 100 TIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ E G +L A +C G++L + ++ W+ + + + R Sbjct: 1098 VMDKFEELGGPSRVLLASITACAEGISLTA-ASRVILLDSEWNPSKT-----KQAIARAF 1151 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G ++ V+VY L+A T++E +R K + ++ + Sbjct: 1152 RPGQQKMVYVYQLLATGTVEEDKYRRTAWKEWVSRMIFSE 1191 >gi|147678776|ref|YP_001212991.1| DNA/RNA helicase [Pelotomaculum thermopropionicum SI] gi|146274873|dbj|BAF60622.1| hypothetical DNA/RNA helicases [Pelotomaculum thermopropionicum SI] Length = 1109 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 65/187 (34%), Gaps = 20/187 (10%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 L + +E +K + ++ + E + E + + + Sbjct: 449 LVLLAKEVEKQEIETKLNRLREVIDD-EKLRETGTKLLIFTE-SRDTLEYLAEKIGRK-- 504 Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 G +D E+ + ++ A A+ G+NLQ+ ++ Sbjct: 505 --------WGYTVTIVHGGMGMDARIRAEYEFKN-RAQVMVATEAAG-EGINLQF-CWLM 553 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V + + W+ +Q + RI + G + V +Y L+A +T + +L+ L K Sbjct: 554 VNYDIPWNPNRLEQRMGRI-----HRYGQRNEVHIYNLVAADTREGRILETLFEKLNRMK 608 Query: 193 LLLNALK 199 L + + Sbjct: 609 EHLGSDR 615 >gi|72391588|ref|XP_846088.1| SNF2 DNA repair protein [Trypanosoma brucei TREU927] gi|74997988|sp|Q57X81|JBP2_TRYBB RecName: Full=Bifunctional helicase and thymine dioxygenase JBP2; AltName: Full=J-binding protein 2; Short=TbJBP2; Includes: RecName: Full=Probable DNA helicase JBP2; Includes: RecName: Full=Thymine dioxygenase JBP2 gi|62175656|gb|AAX69788.1| SNF2 DNA repair protein, putative [Trypanosoma brucei] gi|70802624|gb|AAZ12529.1| SNF2 DNA repair protein, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 1077 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 8/113 (7%) Query: 92 RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ + + + L +GL+L N ++ + WW+ + +E Sbjct: 920 DCQQRRRRVVEMFRDDKNVLCLVVSTQIGAYGLDLTA-ANHVILWDTWWNPQ-----VES 973 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R + +AV Y L A D VL+ K + L+N + + Sbjct: 974 QAIARCYRQNQSKAVIAYKL-ASGFEDATVLKAQARKRALFKCLINEETSQVV 1025 >gi|308498668|ref|XP_003111520.1| hypothetical protein CRE_02961 [Caenorhabditis remanei] gi|308239429|gb|EFO83381.1| hypothetical protein CRE_02961 [Caenorhabditis remanei] Length = 679 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 6/103 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + N+ I + + G G+ L +++VF + ++ Sbjct: 520 PSHQRTALCDSFQNDDSIRVAVLSITAAGVGITLTA-ASVVVFAEIHFNPGYLV-----Q 573 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G K +VFV YLIA+ T D+++ ++ K + + Sbjct: 574 AEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDVLGQV 616 >gi|157961099|ref|YP_001501133.1| helicase domain-containing protein [Shewanella pealeana ATCC 700345] gi|157846099|gb|ABV86598.1| helicase domain protein [Shewanella pealeana ATCC 700345] Length = 1177 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 9/126 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNIL 132 D R F G DK Q +N + +L A + G+NLQ L Sbjct: 661 HTEDGHRRVMTFHGGLGDDKRAEIQQAFNSPPNEHPVRILIAT-DAAREGVNLQGHCADL 719 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + W+ +Q RI T Q + V +Y + + +++VL +L K Sbjct: 720 FHYDIPWNPARMEQRNGRIDRTLQS----ETEVRCHYFVYADRDEDIVLDKLVQKVNTIQ 775 Query: 193 LLLNAL 198 L +L Sbjct: 776 RELGSL 781 >gi|118400670|ref|XP_001032657.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila] gi|89287000|gb|EAR84994.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1326 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 7/125 (5%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 D R ++ + ++ N K + + HG+ L + ++F Sbjct: 329 KCDFRRQYIRIDGNVKQEERVDLVNQFQNNTKTTVAILSLQAASHGITLTASSH-VIFAE 387 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L+ R + V +YLI ++T+DE + L K + +L+ Sbjct: 388 LYPTPAVML-----QAEDRSHRINQNNNVLCHYLIGKDTVDEDIFNLLMQKYKVTSSILD 442 Query: 197 ALKKE 201 +K+ Sbjct: 443 GQRKD 447 >gi|261334482|emb|CBH17476.1| SNF2 DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 967 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 7/117 (5%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + + L CG GLNL ++VF L W+ Sbjct: 528 PLDYILICGNTAAAQREELLNHFRTSPTCHLAVLSMLVCGVGLNLT-CATMVVFTELDWN 586 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 H Q +R+ + G + F+ YL+A+ T D ++ L+ K ++ LL Sbjct: 587 PCTHLQCEDRV-----HRIGQSSSCFIKYLLAEGTSDTIIWPLLQNKLSVTKALLED 638 >gi|71755373|ref|XP_828601.1| SNF2 DNA repair protein [Trypanosoma brucei TREU927] gi|70833987|gb|EAN79489.1| SNF2 DNA repair protein, putative [Trypanosoma brucei] Length = 968 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 7/117 (5%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + + L CG GLNL ++VF L W+ Sbjct: 528 PLDYILICGNTAAAQREELLNHFRTSPTCHLAVLSMLVCGVGLNLT-CATMVVFTELDWN 586 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 H Q +R+ + G + F+ YL+A+ T D ++ L+ K ++ LL Sbjct: 587 PCTHLQCEDRV-----HRIGQSSSCFIKYLLAEGTSDTIIWPLLQNKLSVTKALLED 638 >gi|319412029|emb|CBY91962.1| SNF2 family protein [Streptococcus pneumoniae] Length = 2074 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 6/118 (5%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +K ++ N G++ +L A G GLN+Q + + W + QQ Sbjct: 1702 FVHDANSDEKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQ 1761 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 RI Q + V +Y+ I + + D + K ++ + KE I Sbjct: 1762 RNGRIIR----QGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQIMTS--KEPIR 1813 >gi|261329633|emb|CBH12615.1| SNF2 DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 1077 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 8/113 (7%) Query: 92 RTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ + + + L +GL+L N ++ + WW+ + +E Sbjct: 920 DCQQRRRRVVEMFRDDKNVLCLVVSTQIGAYGLDLTA-ANHVILWDTWWNPQ-----VES 973 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + R + +AV Y L A D VL+ K + L+N + + Sbjct: 974 QAIARCYRQNQSKAVIAYKL-ASGFEDATVLKAQARKRALFKCLINEETSQVV 1025 >gi|167037341|ref|YP_001664919.1| helicase domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115757|ref|YP_004185916.1| helicase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856175|gb|ABY94583.1| helicase domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928848|gb|ADV79533.1| helicase domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 894 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 66/172 (38%), Gaps = 22/172 (12%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 + + ++ + + +K + F ++++ Sbjct: 459 IDFIDQLSMEYKNSQKFIVFTEFLATQQYLK-----DFLESKGYKVAILNGSMSMEERDA 513 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +++E+ + + G GLNLQ+ NI++ + L W+ + +Q I R+ + Sbjct: 514 SLKEFKN--YKDVLISTDAGGEGLNLQF-CNIVINYDLPWNPMKIEQRIGRVD-----RI 565 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTI---------QDLLLNALKKET 202 G +R V V + ++T++ V + L K + +L++++ E Sbjct: 566 GQERDVLVLNFMLKDTVEFRVREVLEEKLRVIYEQFGVDKMGDILDSVQSEM 617 >gi|67465792|ref|XP_649054.1| helicase [Entamoeba histolytica HM-1:IMSS] gi|56465406|gb|EAL43665.1| helicase, putative [Entamoeba histolytica HM-1:IMSS] Length = 837 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 50/164 (30%), Gaps = 18/164 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----------RL 84 + N + +E+ + + + + +++ + L L Sbjct: 436 IDNEIIKMVDEETINLWPKLTVLLKLLKMCEKTNEKVLLFSQYQRTLDSIADLLQSKDIL 495 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ +N +L GLN+ +++F W Sbjct: 496 FLRIDGDLDDGLRKERLRRFNHMSSWGVLLMTIRVGACGLNITGASRVVIFDEGW----- 550 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 I V R + G K+ V Y ++ T++E + +R K Sbjct: 551 --STIGNQAVDRAYRIGQKKDVVSYRIVTCGTLEEKMYRRQVHK 592 >gi|322376606|ref|ZP_08051099.1| SNF2 family protein [Streptococcus sp. M334] gi|321282413|gb|EFX59420.1| SNF2 family protein [Streptococcus sp. M334] Length = 2077 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 6/118 (5%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +K ++ N G++ +L A G GLN+Q + + W + QQ Sbjct: 1705 FVHDANSDEKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQ 1764 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 RI Q + V +Y+ I + + D + K ++ + KE I Sbjct: 1765 RNGRIIR----QGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQIMTS--KEPIR 1816 >gi|182684275|ref|YP_001836022.1| SNF2 family protein [Streptococcus pneumoniae CGSP14] gi|182629609|gb|ACB90557.1| SNF2 family protein [Streptococcus pneumoniae CGSP14] Length = 2077 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 6/118 (5%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +K ++ N G++ +L A G GLN+Q + + W + QQ Sbjct: 1705 FVHDANSDEKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQ 1764 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 RI Q + V +Y+ I + + D + K ++ + KE I Sbjct: 1765 RNGRIIR----QGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQIMTS--KEPIR 1816 >gi|301775627|ref|XP_002923234.1| PREDICTED: LOW QUALITY PROTEIN: e1A-binding protein p400-like [Ailuropoda melanoleuca] Length = 2910 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 22/170 (12%), Positives = 60/170 (35%), Gaps = 25/170 (14%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + E + K++AL ++++K + +++ L Sbjct: 1706 LQRMTALR------SLRFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDI 1759 Query: 84 LQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNIL 132 L+ + ++ +N + +I S G++L + + Sbjct: 1760 LEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCAILSTHSRATGVSL-VEADAV 1818 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 VF+ + +++ + G ++ V +Y L++ N+I+E +L+ Sbjct: 1819 VFYDNDLNP-----VMDAKAQEWCERIGRRKDVHIYRLVSGNSIEEKLLK 1863 >gi|298385364|ref|ZP_06994922.1| SNF2 family protein [Bacteroides sp. 1_1_14] gi|298261505|gb|EFI04371.1| SNF2 family protein [Bacteroides sp. 1_1_14] Length = 2373 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 46/110 (41%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T+ K ++ N G++ ++ + G G+N+Q + L+ ++ Q Sbjct: 726 MRSGMTVKKKLEIFEKVNRGEVRVILGSTFTLGTGVNIQERLHTLIHLDAPNRPMDYTQR 785 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + V + ++++D QRL+TK I D ++N Sbjct: 786 NGRILRQGNLHKDMNKPVRILRFGVEDSLDVTAYQRLKTKGAIADSIMNG 835 >gi|225856813|ref|YP_002738324.1| SNF2 family protein [Streptococcus pneumoniae P1031] gi|225725125|gb|ACO20977.1| SNF2 family protein [Streptococcus pneumoniae P1031] Length = 2076 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 6/118 (5%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +K ++ N G++ +L A G GLN+Q + + W + QQ Sbjct: 1704 FVHDANSDEKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQ 1763 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 RI Q + V +Y+ I + + D + K ++ + KE I Sbjct: 1764 RNGRIIR----QGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQIMTS--KEPIR 1815 >gi|157870051|ref|XP_001683576.1| DNA helicase [Leishmania major strain Friedlin] gi|68126642|emb|CAJ04339.1| putative DNA helicase [Leishmania major strain Friedlin] Length = 1029 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 6/108 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++P E + S G G N + +VF L W+ H Q +R+ Sbjct: 521 PPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFT-CASTVVFTELDWNPSTHLQCEDRV 579 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + + YL+A+ T D ++ L+TK ++ + K Sbjct: 580 -----HRIGQAQPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFETSK 622 >gi|75758379|ref|ZP_00738502.1| Superfamily II DNA/RNA helicases, SNF2 family [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228904786|ref|ZP_04068840.1| Superfamily II DNA/RNA helicase, SNF2 [Bacillus thuringiensis IBL 4222] gi|74494105|gb|EAO57198.1| Superfamily II DNA/RNA helicases, SNF2 family [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228854800|gb|EEM99404.1| Superfamily II DNA/RNA helicase, SNF2 [Bacillus thuringiensis IBL 4222] Length = 595 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 20/184 (10%) Query: 32 CLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 LQ+ +G + E + V K+ L I ++ A I F + Sbjct: 398 LLQMGQSGMSKHYLEHIPENVKSPKLTELVDICKERIEAGINKIVIFTQFAKMQTLIDEE 457 Query: 91 -------------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + + + + +GLN+Q+ N L+ + Sbjct: 458 LSTLGKVALLNGSMSSAQRQEQLETFKADPEYKFFVLT-DAGNYGLNIQF-ANTLINYDS 515 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ +Q R+ V + L+ TIDE + + L K + ++ Sbjct: 516 PWNPATFEQRAGRVHRIGSTH----NVVDIISLVTMGTIDEKIQETLEEKRKLGVAVIER 571 Query: 198 LKKE 201 + E Sbjct: 572 NQSE 575 >gi|297471769|ref|XP_002685457.1| PREDICTED: zinc finger, RAN-binding domain containing 3 [Bos taurus] gi|296490526|gb|DAA32639.1| zinc finger, RAN-binding domain containing 3 [Bos taurus] Length = 1074 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 321 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVPSSERIHL 380 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + + G GL +VF L+WD + R + Sbjct: 381 VNQFQKDPETRVAILSIQAAGQGLTFTA-ATHVVFAELYWDPGHI-----KQAEDRAHRI 434 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 435 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKL 477 >gi|109104419|ref|XP_001101449.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like, partial [Macaca mulatta] Length = 958 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCT 100 K A++ I+ + F L+ G + + Sbjct: 201 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGGVSSSERIHL 260 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ + + + G GL + +VF L+WD + R + Sbjct: 261 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRI 314 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 315 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 357 >gi|307136203|gb|ADN34041.1| chromatin remodelling complex ATPase chain isw-1 [Cucumis melo subsp. melo] Length = 385 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 6/108 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + I + G GL L + ++F L W + Sbjct: 237 PPAMRQALVSDFQQKDSIMAAVLSIKAGGVGLTLTA-ASTVIFTELSWTPGDLI-----Q 290 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G +V ++YL+A +T+D+++ +++K +L+ + Sbjct: 291 AEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLENLGQMLDGEE 338 >gi|126462608|ref|YP_001043722.1| helicase domain-containing protein [Rhodobacter sphaeroides ATCC 17029] gi|126104272|gb|ABN76950.1| helicase domain protein [Rhodobacter sphaeroides ATCC 17029] Length = 1170 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T ++ ++ + + + L+ + G G+NLQ G+++V + L W+ + +Q Sbjct: 540 HGGVTREERRKVVERFMQDRDMLVLIANDAAGEGVNLQR-GHLMVNYDLPWNPNKIEQRF 598 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A +T + V RL K L Sbjct: 599 GRI-----HRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREALGG 642 >gi|311272141|ref|XP_003133319.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger Ran-binding domain-containing protein 3-like [Sus scrofa] Length = 1044 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCT 100 K A+ I+ + F L+ LQ + Sbjct: 311 AKAGAVRDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIESKTRYVRIDGSVPSSERIHL 370 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ + + + + G GL +VF L+WD + R + Sbjct: 371 VNQFQKDPETRVAILSIQAAGQGLTFTA-ATHVVFAELYWDPGHI-----KQAEDRAHRI 424 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 425 GQCSSVNIHYLIANGTLDTLMWAMLNRKAQVTGSTLNGRKEKL 467 >gi|293190852|ref|ZP_06609014.1| helicase/SNF2 domain protein [Actinomyces odontolyticus F0309] gi|292820751|gb|EFF79713.1| helicase/SNF2 domain protein [Actinomyces odontolyticus F0309] Length = 955 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + E+ + L + G+NLQ+ ++LV + L W+ + +Q I R+ Sbjct: 489 DRRKALVDEFRKRGR--LMIATEAAAEGINLQF-CSMLVNYDLPWNPQRVEQRIGRV--- 542 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + + +E +LQ L K + + A Sbjct: 543 --HRFGQKHNVIVVNFSNKGNVAEERILQLLTEKFKLFTSVFGA 584 >gi|242015993|ref|XP_002428623.1| snf2 histone linker PHD ring helicase, putative [Pediculus humanus corporis] gi|212513286|gb|EEB15885.1| snf2 histone linker PHD ring helicase, putative [Pediculus humanus corporis] Length = 1709 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 48/143 (33%), Gaps = 14/143 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------PC 99 D +++L + + +++ + L L+ A Q + Sbjct: 1254 GDHSTKVDGIVRSLLSLKREDENVKVLIFSTWGVVLKILEVALTQNNISFRRMPGHNYQI 1313 Query: 100 TIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ + + + L + GLNL N + + E V R Sbjct: 1314 HLKQFKDPNLKVTALLLPISWGSKGLNLTE-ANHVFLVEPIMNPA-----EELQAVGRVH 1367 Query: 158 QAGFKRAVFVYYLIAQNTIDELV 180 + G + V+ + + TI+E + Sbjct: 1368 RIGQTKKTTVHKFLIKGTIEEKI 1390 >gi|296134095|ref|YP_003641342.1| helicase domain protein [Thermincola sp. JR] gi|296032673|gb|ADG83441.1| helicase domain protein [Thermincola potens JR] Length = 469 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 54/142 (38%), Gaps = 6/142 (4%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 ++++ + ++L F ++ T + ++ Sbjct: 311 HPGKILVFTEYMQTQFFIGRWLNELGINFIHFNGKLKRNQKEYTKWLFQNKDYRVMICT- 369 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 S GLN Q+ N++V F L W+ + +Q I RI Q V+VY + Q+T+ Sbjct: 370 DSGSQGLNFQF-CNVIVNFDLPWNPMKVEQRIGRIDRLGQTAD----EVYVYNFVLQDTV 424 Query: 177 DELVLQRLRTKSTIQDLLLNAL 198 +E + L +K + + L Sbjct: 425 EEKIFHILSSKIALFKECIGEL 446 >gi|169869799|ref|XP_001841456.1| hypothetical protein CC1G_12776 [Coprinopsis cinerea okayama7#130] gi|116497465|gb|EAU80360.1| hypothetical protein CC1G_12776 [Coprinopsis cinerea okayama7#130] Length = 1321 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +D+ + +N + + +L GLNL N+++F W ++ ER Sbjct: 870 PIDQRSSIVATFNTDPEYRVLIFS-KVGATGLNLTR-ANVVLFLDQPWSAQD-----ERQ 922 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + R V V +++A++T D + R K + D LN Sbjct: 923 IIGRAYRQRQTREVTVIHILAEDTADITLSLLARGKKDMLDAFLN 967 >gi|322385340|ref|ZP_08058985.1| SNF2 family protein [Streptococcus cristatus ATCC 51100] gi|321270599|gb|EFX53514.1| SNF2 family protein [Streptococcus cristatus ATCC 51100] Length = 2077 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 6/118 (5%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +K ++ N G++ +L A G GLN+Q + + W + QQ Sbjct: 1705 FVHDANSDEKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQ 1764 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 RI Q + V +Y+ I + + D + K ++ + KE I Sbjct: 1765 RNGRIIR----QGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQIMTS--KEPIR 1816 >gi|85085403|ref|XP_957501.1| hypothetical protein NCU04424 [Neurospora crassa OR74A] gi|28918593|gb|EAA28265.1| predicted protein [Neurospora crassa OR74A] Length = 405 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 55/165 (33%), Gaps = 15/165 (9%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR 92 LQ + V E + + I I + + + ++ +A + Sbjct: 234 LQPGSHFVNAGESPDPTGLLGDAIADTIDINSSLQTD--LFSTKLKAVRKQVLEAGTGTK 291 Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + I+ + + + +L + GLNL + + W+ +E Sbjct: 292 HISERTRLIRTFQGDPQAFILIMSVGTGAVGLNLTA-ASHVHVVEPHWNPS-----VEAQ 345 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + V V I + T+++ K T+ L + Sbjct: 346 AIARAVRMGQTKNVLVTRYIMKRTVED------TKKQTLAKLTFD 384 >gi|322492113|emb|CBZ27387.1| putative DNA helicase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1087 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 6/105 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++P E + S G G N + +VF L W+ H Q +R+ Sbjct: 513 PPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFT-CASTVVFTELDWNPSTHLQCEDRV 571 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + YL+A+ T D ++ L+TK ++ + Sbjct: 572 -----HRIGQAHPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFE 611 >gi|168697933|ref|ZP_02730210.1| Helicase, C-terminal [Gemmata obscuriglobus UQM 2246] Length = 1390 Score = 61.7 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 4/104 (3%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + K ++ G + +L + G G N+Q + W E +Q RI Sbjct: 1107 DSDAKKQALFEKVRNGAVRVLIGSTSKMGTGTNVQKRLVAMHHLDAPWKPAEVEQRDGRI 1166 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q V +Y + + + D + Q L TK+ ++ Sbjct: 1167 LR----QGNQNEEVAIYRYVTEGSFDAYMWQALETKAKFIGQIM 1206 >gi|219666703|ref|YP_002457138.1| helicase [Desulfitobacterium hafniense DCB-2] gi|219536963|gb|ACL18702.1| helicase domain protein [Desulfitobacterium hafniense DCB-2] Length = 1168 Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 34/218 (15%) Query: 12 YCDLQGENIEAFNSA----------SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 D + + ++ +A + K ++AN E++ W E+ + Sbjct: 432 LEDTEEKVVDQATAAQTIQELEAEIATLKKLERMANDVRQSGEDRKWDELSRLLQDNDTM 491 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCTIQEW-NEG 107 +I+ L L G D+ + + + Sbjct: 492 FGTDGLREKLIIFTEHRDTLRYLTDKIRSLLGNEEAVVTIHGGLLRDERRKVEELFKQDK 551 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ +L A A+ G+NLQ +++V + L W+ +Q RI + G + Sbjct: 552 EVRILIATDAAG-EGINLQR-AHLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHL 604 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + L+++ T + +V QRL K + ALK + V Sbjct: 605 WNLVSKETREGMVFQRLFEKLEQER---EALKGKVFDV 639 >gi|73536510|ref|XP_847679.1| hypothetical protein [Leishmania major strain Friedlin] gi|321438592|emb|CBZ12351.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 1576 Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 8/109 (7%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 C + N +L + G G+ L + + + W+ + R Sbjct: 547 RCISELQNNDACRVLLCSVRAGGVGIKLTA-ASHCILLDVSWNPTDDM-----QATYRLY 600 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--LNALKKETIH 204 + G R V +Y L T + +V +S +Q + ++ +++ H Sbjct: 601 RYGQLRPVNIYRLATWGTSEHIVFAYALQRSWLQKKIADISDPRRQQRH 649 >gi|242222574|ref|XP_002477001.1| predicted protein [Postia placenta Mad-698-R] gi|220723673|gb|EED77797.1| predicted protein [Postia placenta Mad-698-R] Length = 430 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E+N+ + + G G+N+ +I+V + + + + R Sbjct: 1 MAIDEYNKPDSDKFIFLLTTRAGGLGINVTT-ADIVVLYDSDLN-----SRADLQAMDRA 54 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G + V+V+ I + +++E +L+R + L++ + Sbjct: 55 HRIGQTKQVYVFRFITEGSVEERMLERTAQALRLDQLVMQQGR 97 >gi|238580466|ref|XP_002389294.1| hypothetical protein MPER_11594 [Moniliophthora perniciosa FA553] gi|215451409|gb|EEB90224.1| hypothetical protein MPER_11594 [Moniliophthora perniciosa FA553] Length = 97 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N + WW Q+ IE + R + G + V VY LI++NT++ VL K Sbjct: 1 ANNVYLMDPWW-----QEGIESQAIDRVNRIGQTKPVHVYQLISENTVESRVLDIQERKK 55 Query: 189 TIQDLLLNALKK 200 + + +K+ Sbjct: 56 NLIKQAFSGMKR 67 >gi|60544832|gb|AAX22754.1| SWI2/SNF2-like protein [Arabidopsis thaliana] Length = 705 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 43/117 (36%), Gaps = 10/117 (8%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGN 130 I+ Y+F+ + + + ++ + + + G G+NL + Sbjct: 530 IMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTA-AD 588 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + W+ + ++ + R + G + V VY L +I+ + L TK Sbjct: 589 TCILYDSDWNPQ-----MDLQAMDRCHRIGQTKPVHVYRLSTAQSIE---IHLLSTK 637 >gi|297668526|ref|XP_002812483.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Pongo abelii] Length = 1024 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 266 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHL 325 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G GL + +VF L+WD + R + Sbjct: 326 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRI 379 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 380 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 422 >gi|195472837|ref|XP_002088705.1| GE11268 [Drosophila yakuba] gi|194174806|gb|EDW88417.1| GE11268 [Drosophila yakuba] Length = 755 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 6/99 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + +C G+ L I+VF L W+ +R Sbjct: 574 RSDSVDTFQKKSSCKVALLSLKACNSGITLTA-AEIIVFAELDWNPSTL-----AQAESR 627 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V YL+A NT D+ + L+ K + + Sbjct: 628 AHRIGQTKPVICRYLMAHNTADDTIWNMLKNKQEVLSKV 666 >gi|55980989|ref|YP_144286.1| hypothetical protein TTHA1020 [Thermus thermophilus HB8] gi|55772402|dbj|BAD70843.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 1110 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 73/197 (37%), Gaps = 21/197 (10%) Query: 5 HKFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + +RE L A + K +L E++ ++ ++ + E Sbjct: 445 EELERE-IAQLDELIALARRAERLEIETKLRKL----REVMEDERLQQTGEKLLIFTESR 499 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + + + + G LD E+ E + ++ + G G Sbjct: 500 ETLEYLVEKLRGWGY------SVVSLHGGMDLDARIRAEHEFRE-RAQVMV-STEAGGEG 551 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +NLQ+ +++V + + W+ +Q + R+ + G + V +Y L+A +T + VL+ Sbjct: 552 INLQF-CSLMVNYDIPWNPNRLEQRMGRV-----HRYGQTKEVHIYNLVALDTREGKVLE 605 Query: 183 RLRTKSTIQDLLLNALK 199 L K L + + Sbjct: 606 ALFRKLREIQEALGSDR 622 >gi|119632037|gb|EAX11632.1| zinc finger, RAN-binding domain containing 3, isoform CRA_d [Homo sapiens] Length = 458 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 266 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHL 325 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G GL + +VF L+WD + R + Sbjct: 326 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRI 379 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 380 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 422 >gi|190890732|ref|YP_001977274.1| putative helicase/DNA methylase hybrid protein [Rhizobium etli CIAT 652] gi|190696011|gb|ACE90096.1| putative helicase/DNA methylase hybrid protein [Rhizobium etli CIAT 652] Length = 1324 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + ++ A + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 488 RSALVDYFRDEG-QIMIAT-EAGAEGINLQF-CSLVVNYDLPWNPQRVEQRIGRC----- 539 Query: 157 RQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V I +N D+ V Q L K + + + A Sbjct: 540 HRYGQKHDVVVVNFINRKNEADQRVYQLLSEKFRLFEGVFGA 581 >gi|160942833|ref|ZP_02090073.1| hypothetical protein FAEPRAM212_00310 [Faecalibacterium prausnitzii M21/2] gi|158445885|gb|EDP22888.1| hypothetical protein FAEPRAM212_00310 [Faecalibacterium prausnitzii M21/2] Length = 1925 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 4/115 (3%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + T +K + G++ +L A G G N+Q + + W Sbjct: 1528 QEIEFIHNADTENKKAELFSKVRSGQVRVLLGSTAKMGAGTNVQTLLVAVHHLDVGWRPS 1587 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q RI Q + V+VY + ++T D + Q L K ++ + Sbjct: 1588 DMTQRNGRIIR----QGNQNKQVYVYNYVTESTFDAYLYQTLENKQKFISQIMTS 1638 >gi|313115905|ref|ZP_07801333.1| protein, SNF2 family [Faecalibacterium cf. prausnitzii KLE1255] gi|310621773|gb|EFQ05300.1| protein, SNF2 family [Faecalibacterium cf. prausnitzii KLE1255] Length = 1922 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 4/115 (3%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + T +K + G++ +L A G G N+Q + + W Sbjct: 1527 QEIEFIHNADTENKKAELFSKVRSGQVRVLLGSTAKMGAGTNVQTLLVAVHHLDVGWRPS 1586 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q RI Q + V+VY + ++T D + Q L K ++ + Sbjct: 1587 DMTQRNGRIIR----QGNQNKQVYVYNYVTESTFDAYLYQTLENKQKFISQIMTS 1637 >gi|284046270|ref|YP_003396610.1| helicase [Conexibacter woesei DSM 14684] gi|283950491|gb|ADB53235.1| helicase domain protein [Conexibacter woesei DSM 14684] Length = 726 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 5/101 (4%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 T++ + + P L + + F L W + R Sbjct: 596 REATVRAFQQPDGPQLIVAATQVAAQGITLTRASNVAFLELEWTPA-----MHDQAEDRC 650 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G AV +YL+A TIDE + ++ K I + + Sbjct: 651 HRIGQHDAVTAWYLLAARTIDETMAHLIQRKRGIVAAVTDG 691 >gi|308273413|emb|CBX30015.1| hypothetical protein N47_D28240 [uncultured Desulfobacterium sp.] Length = 928 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 60/156 (38%), Gaps = 18/156 (11%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----------DPC 99 D I+A+E I + +I+ + L L++ + +K Sbjct: 508 KFDTLIRAIEQIRRENKNDKMIIFTQYLETLYYLKEELGKYYPPEKIAILKGGPLEDKIA 567 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + + ++ G G+NLQ +L + L W+ +Q I RI + Sbjct: 568 SCESFWDESGAQFLISTSAGGEGINLQ-VCRLLFNYDLPWNPMAVEQRIGRI-----HRY 621 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLL 194 G VY L+A+ TI+E V + L K I + Sbjct: 622 GQTETAQVYNLVAEETIEEQVYKILEEKLLEIASAI 657 >gi|75812890|ref|YP_320507.1| Type III restriction enzyme, res subunit [Anabaena variabilis ATCC 29413] gi|75705646|gb|ABA25318.1| Type III restriction enzyme, res subunit [Anabaena variabilis ATCC 29413] Length = 900 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 9/107 (8%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +K +++N+G++ + G G++LQ L+ L W+ Q + R+ Sbjct: 524 REKRENAAEKFNKGEVR-FLISTEAGGEGIDLQENCYSLIHVDLPWNPMRLHQRVGRL-- 580 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G KRAV V L T++ L+ +L K D ++ +L++ Sbjct: 581 ---NRYGQKRAVEVITLRNPQTVETLIWDKLNRKI---DNIMQSLQQ 621 >gi|307110467|gb|EFN58703.1| hypothetical protein CHLNCDRAFT_34017 [Chlorella variabilis] Length = 701 Score = 61.3 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%) Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G +R V VY L+ + T++E ++ R K + L+NA Sbjct: 570 QAMDRAHRLGQQRTVNVYRLLVRGTVEEQIMSLQRFKLDVAATLVNADNA 619 >gi|25395804|pir||F88481 protein C16A3.1 [imported] - Caenorhabditis elegans Length = 866 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + I + + G G+ L +++VF + ++ Sbjct: 704 PSHRRTALCDSFQTDDNIRVAVLSITAAGVGITLTA-ASVVVFAEIHFNPGYLV-----Q 757 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G K +VFV YLIA+ T D+++ ++ K + + Sbjct: 758 AEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDVLGQV 800 >gi|119632036|gb|EAX11631.1| zinc finger, RAN-binding domain containing 3, isoform CRA_c [Homo sapiens] gi|119632038|gb|EAX11633.1| zinc finger, RAN-binding domain containing 3, isoform CRA_c [Homo sapiens] Length = 1019 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 261 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHL 320 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G GL + +VF L+WD + R + Sbjct: 321 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRI 374 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 375 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 417 >gi|171681303|ref|XP_001905595.1| hypothetical protein [Podospora anserina S mat+] gi|170940610|emb|CAP65838.1| unnamed protein product [Podospora anserina S mat+] Length = 213 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 5/88 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 R+ + ++ ++ +P+L + GLN + W+ +E Sbjct: 47 SRSKNDRRASLHDFRTKDVPVLLMTFGTGSMGLNDLNVARRVHILEPQWNPS-----VEN 101 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 + R + G R V V + + +I+E Sbjct: 102 QAIGRVSRFGQTREVTVIRYVMKKSIEE 129 >gi|114762663|ref|ZP_01442097.1| possible ATP-dependent RNA helicase [Pelagibaca bermudensis HTCC2601] gi|114544573|gb|EAU47579.1| possible ATP-dependent RNA helicase [Roseovarius sp. HTCC2601] Length = 978 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 6/109 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G T ++ ++ + + + L+ + G G+NLQ G+++V + L W+ + +Q Sbjct: 524 YGGVTREERRKVVERFMQDRDMLVLIANDAAGEGVNLQR-GHLMVNYDLPWNPNKIEQRF 582 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A++T + V RL K L Sbjct: 583 GRI-----HRIGQTEVCHLWNLVAKDTREGDVYARLLEKLEAAREALGG 626 >gi|218200306|gb|EEC82733.1| hypothetical protein OsI_27432 [Oryza sativa Indica Group] Length = 1770 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N GK +L A +C G++L G + LV W+ + R + Sbjct: 1635 RSDVMDKFNGDSAGKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKT-----RQAI 1688 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G +R V+VY L+A T +E R K+ + ++ Sbjct: 1689 ARAFRRGQERTVYVYLLVASGTWEEEKYNSNRRKAWMSKMVF 1730 >gi|171684657|ref|XP_001907270.1| hypothetical protein [Podospora anserina S mat+] gi|170942289|emb|CAP67941.1| unnamed protein product [Podospora anserina S mat+] Length = 1139 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 66/190 (34%), Gaps = 12/190 (6%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q + L ++ A+ K ++ + + E ++II Sbjct: 834 RKVQMQQAPSLPTAEVKGTEIAAPLAKTRLISTASAKLSYLIDQVIKYQE---HEQIIIF 890 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGL 123 N L + +G + + + +N K +L GL Sbjct: 891 YENDNVAYYLAGVLEILQVQHLIYARGLSPQRRADYVATFNQSSKFRVLLMDITQAAFGL 950 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 ++ + + F + + + +E + R R+ ++ V V L+ +++++E++++R Sbjct: 951 DM-KSASRIYFINPVLNPQ-----VEAQAIGRARRISQQKPVTVETLVLKDSVEEVIVRR 1004 Query: 184 LRTKSTIQDL 193 K Q Sbjct: 1005 --RKEMTQAE 1012 >gi|116329390|ref|YP_799110.1| DNA/RNA helicase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330009|ref|YP_799727.1| DNA/RNA helicase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122134|gb|ABJ80177.1| DNA/RNA helicase Superfamily II [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123698|gb|ABJ74969.1| DNA/RNA helicase Superfamily II [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 951 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 64/161 (39%), Gaps = 18/161 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---------ARLQKAFPQGRTLDK 96 K ++ K+K + + K + I+ F + ++ K Sbjct: 458 KIKEDKKSIKLKETILKLRKEGHSKFIIFTQFRTTQDFLASVLSDFQVTLFHGSLGADAK 517 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++ + +I + G G NLQ+ N+L + L W + +Q I RI Sbjct: 518 ENAIVEFKTKTEI---LICTEAGGEGRNLQF-ANVLFNYDLPWSPLKIEQRIGRI----- 568 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K VF++ +++T+ E +L+ L K + + + + Sbjct: 569 HRFGQKDNVFIFNFASKDTVAERILEVLTNKIRLFEESIGS 609 >gi|325848756|ref|ZP_08170266.1| SNF2 family N-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480400|gb|EGC83462.1| SNF2 family N-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 478 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 62/160 (38%), Gaps = 20/160 (12%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHF------------NSDLARLQKAFPQGRTLDKDPCT 100 + ++KA IIE+ +IV + + F + Sbjct: 293 NYRLKAFMDIIEEFQG-KVIVYCQYQIEAKTIVDLLNKNYGENSAVLFDGTINTKQRNLN 351 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+ + G L A+ + G LNLQ+ N +++++ WD +Q +RI + G Sbjct: 352 IERFRNG-SRFLVANKSCAGFSLNLQF-CNQIIYYNNDWDYGTREQSEDRI-----NRIG 404 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + + +I T++E ++ L K + + L LK Sbjct: 405 QEYKCYYLDIICAGTVEEYIMDCLSKKEALGNRFLKELKG 444 >gi|288556434|ref|YP_003428369.1| SNF2 family DNA/RNA helicase [Bacillus pseudofirmus OF4] gi|288547594|gb|ADC51477.1| SNF2 family DNA/RNA helicase [Bacillus pseudofirmus OF4] Length = 855 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 47/109 (43%), Gaps = 9/109 (8%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ I+++ +I +L +P + G ++L + + ++ ++L Q +RI Sbjct: 729 QEERDAIIEQFLNREIDILITNPHTLGESVSLHHTCHDAIYLEYSFNLTHLLQSRDRIHR 788 Query: 154 TRQRQAGFKRAVFVYYLIAQN------TIDELVLQRLRTKSTIQDLLLN 196 ++ + + Y+L+ Q TIDE + QRL K + Sbjct: 789 LGLKEDDYTQ---YYFLMLQGQAGERSTIDERIYQRLMVKEERMLSAIE 834 >gi|28493085|ref|NP_787246.1| DNA helicase [Tropheryma whipplei str. Twist] gi|28476125|gb|AAO44215.1| DNA helicase [Tropheryma whipplei str. Twist] Length = 698 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 64/196 (32%), Gaps = 17/196 (8%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 ++ ++ A N S V+ + + + KI IE N + Sbjct: 496 VESKDSSALNIFS-IVRKIGITKAP-LAIDFTIQMLDSVGKIVFFAKHIEVMN----MAE 549 Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F R D+ + + + G G+NLQ N+++ Sbjct: 550 EMFCQQGIRSVSIRGSQTPNDRKNALRTFDEDPDTRVAICSLTAAGLGINLQVASNVVLS 609 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-----ST 189 W E+ + R + G V + ++ T+D + + +K + Sbjct: 610 ELSWTAAEQG------QAIDRLHRIGQTEPVTAWRILGAGTVDIRMAALVDSKSNDAILS 663 Query: 190 IQDLLLNALKKETIHV 205 + + +++E++H+ Sbjct: 664 LDGGDMREVQQESLHI 679 >gi|52545910|emb|CAE45796.2| hypothetical protein [Homo sapiens] Length = 192 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 28/45 (62%) Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G + V VY LI + TI+E +LQR + KS IQ ++++ Sbjct: 1 MDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISG 45 >gi|119356468|ref|YP_911112.1| helicase domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119353817|gb|ABL64688.1| helicase domain protein [Chlorobium phaeobacteroides DSM 266] Length = 1169 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 10/114 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D+ ++ +I +L A A+ G+NLQ N++V + L W+ +Q RI Sbjct: 537 HRDDRRKAQELFRSDPEIRVLVATDAAG-EGINLQN-ANLMVNYDLPWNPNRLEQRFGRI 594 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G + ++ L+A+ T + V RL K + +ALK E +V Sbjct: 595 -----HRIGQQEVCHLWNLVAKETREGDVYFRLLEKLQVVS---DALKGEVFNV 640 >gi|62860046|ref|NP_115519.2| zinc finger Ran-binding domain-containing protein 3 [Homo sapiens] gi|74741477|sp|Q5FWF4|ZRAB3_HUMAN RecName: Full=Zinc finger Ran-binding domain-containing protein 3 gi|66840172|gb|AAH89429.2| Zinc finger, RAN-binding domain containing 3 [Homo sapiens] Length = 1079 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 321 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHL 380 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G GL + +VF L+WD + R + Sbjct: 381 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRI 434 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 435 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 477 >gi|28572293|ref|NP_789073.1| helicase regulator [Tropheryma whipplei TW08/27] gi|28410424|emb|CAD66810.1| putative helicase regulator [Tropheryma whipplei TW08/27] Length = 690 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 64/196 (32%), Gaps = 17/196 (8%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 ++ ++ A N S V+ + + + KI IE N + Sbjct: 488 VESKDSSALNIFS-IVRKIGITKAP-LAIDFTIQMLDSVGKIVFFAKHIEVMN----MAE 541 Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F R D+ + + + G G+NLQ N+++ Sbjct: 542 EMFCQQGIRSVSIRGSQTPNDRKNALRTFDEDPDTRVAICSLTAAGLGINLQVASNVVLS 601 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-----ST 189 W E+ + R + G V + ++ T+D + + +K + Sbjct: 602 ELSWTAAEQG------QAIDRLHRIGQTEPVTAWRILGAGTVDIRMAALVDSKSNDAILS 655 Query: 190 IQDLLLNALKKETIHV 205 + + +++E++H+ Sbjct: 656 LDGGDMREVQQESLHI 671 >gi|159466410|ref|XP_001691402.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158279374|gb|EDP05135.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 1610 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 20/177 (11%), Positives = 43/177 (24%), Gaps = 25/177 (14%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 + ++ + + + + L N V + + + Sbjct: 1161 KTSILQVEAADELMTKIGALLRRLVWLRNH-----RPAEKSLVFS---QWADALQIVERG 1212 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 + R P ++ + GL L Sbjct: 1213 LRANDIGCVTLESGRRM-----------RPAMNAFLHDPACRVFLLSLRQGAAGLTL-VR 1260 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N + D Q V R + G R V V L+ ++++ V+ L+ Sbjct: 1261 ANHVFLLEPALDPAIEQ-----QAVARVHRIGQTRDVSVTRLLVDDSVERHVMAMLK 1312 >gi|39935287|ref|NP_947563.1| ATP-dependent RNA helicase [Rhodopseudomonas palustris CGA009] gi|39649139|emb|CAE27659.1| possible ATP-dependent RNA helicase [Rhodopseudomonas palustris CGA009] Length = 1172 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + ++ I+ + + + L+ + G G+NLQ G+++V + L W+ + +Q Sbjct: 540 HGGVSREERRKVIERFMQDRDMLVLIANDAAGEGVNLQR-GHLMVNYDLPWNPNKIEQRF 598 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A +T + V RL K L Sbjct: 599 GRI-----HRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREALGG 642 >gi|194336225|ref|YP_002018019.1| helicase domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194308702|gb|ACF43402.1| helicase domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 1169 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 73/210 (34%), Gaps = 31/210 (14%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 + +L GE Q A G V +++ W E+ ++ Sbjct: 448 QTIAELDGE-------IFILQALEQQAKGLVASGKDRKWDELSRILQNEPQMRDAGGRMR 500 Query: 70 PIIVAYHFNSDLARLQK--------------AFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 II+ L L + D+ ++ +I +L A Sbjct: 501 KIIIFSEHRDTLNYLHEKIAGVLGSHDAIVVIHGAVHRDDRRKSQELFRSDPEIRVLVAT 560 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G G+NLQ N++V + L W+ +Q RI + G + ++ L+A+ T Sbjct: 561 -DAAGEGINLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIGQQEVCHLWNLVAKET 613 Query: 176 IDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V RL K + ALK E +V Sbjct: 614 REGDVYFRLLEKLQVVS---EALKGEVFNV 640 >gi|119632040|gb|EAX11635.1| zinc finger, RAN-binding domain containing 3, isoform CRA_f [Homo sapiens] Length = 1017 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 261 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHL 320 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G GL + +VF L+WD + R + Sbjct: 321 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRI 374 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 375 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 417 >gi|289621598|emb|CBI52381.1| unnamed protein product [Sordaria macrospora] Length = 501 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 28/104 (26%), Gaps = 23/104 (22%) Query: 93 TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + + +L + +E Sbjct: 380 PQRERQNVVNRFRQDPSCRVLLLTLSCG----------------------AVGNPTLEEQ 417 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G R V +++ +E V++ K + +LL Sbjct: 418 ALARIHRMGQTREVTTVRFYVRDSFEERVMEVQEKKRKLVTVLL 461 >gi|147776792|emb|CAN74674.1| hypothetical protein VITISV_020205 [Vitis vinifera] Length = 278 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 17/149 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT----- 93 E ++W E LE+ + + I+ + + L LQ + Sbjct: 121 PHARLENRNWVESSKVAALLLELENLCSVGSKSILFSQWTAFLDLLQIPLSRSNISFVRL 180 Query: 94 -----LDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + I+++ E I +L + G G+NL + WW+ Sbjct: 181 DGTLNQQQREKVIKQFSEESHILVLLMSLKAGGVGINLMA-ASHAFVLDPWWNPA----- 234 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 +E V R + G + V + IA+ TI Sbjct: 235 VEEQAVMRIHRIGQTKRVMIKRFIAKGTI 263 >gi|154244631|ref|YP_001415589.1| helicase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154158716|gb|ABS65932.1| helicase domain protein [Xanthobacter autotrophicus Py2] Length = 1167 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 8/149 (5%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ--KAFPQGRTLDKDPCTIQEWNEGK 108 + K + +I + + + L + G + ++ ++ + + K Sbjct: 501 IDSAKNRRKLIIFTEPKDTLNYLLEKVRARLGNPEAVDVIHGGVSREERRKVVERFMQDK 560 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L+ + G G+NLQ G+++V + L W+ + +Q RI + G ++ Sbjct: 561 DLLVLIANDAAGEGVNLQR-GHLMVNYDLPWNPNKIEQRFGRI-----HRIGQTEVCHLW 614 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 L+A +T + V RL K L Sbjct: 615 NLVAADTREGEVYARLLEKLEAAREALGG 643 >gi|258511218|ref|YP_003184652.1| helicase domain-containing protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477944|gb|ACV58263.1| helicase domain protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 1170 Score = 61.3 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 79/225 (35%), Gaps = 38/225 (16%) Query: 3 QYHKFQRE---------LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD 53 +Y + + E +L+ E + LA+ V +++ W ++ Sbjct: 436 EYEELEDEIASQATAAQTIAELEQEIRT-------LERLEALAHQLVLSNQDSKWTQLST 488 Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCT 100 E+ + N +I+ L LQ+ G D+ Sbjct: 489 LLHDEPEMRDKSGNRRKLIIFTEHRDTLNYLQRKMEGFLGRPDAIVAIHGGTKRDERRKI 548 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +++ L+ + G G+NLQ N+L+ + L W+ +Q RI + G Sbjct: 549 QEKFWHDPDTLILLATDAAGEGVNLQN-ANLLINYDLPWNPNRLEQRFGRI-----HRIG 602 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 +++ L+A T + V QRL K ++ ALK + Sbjct: 603 QTEVCYMWNLVAAKTREGEVFQRLFEKLKVER---EALKGRVFDI 644 >gi|170061901|ref|XP_001866436.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167880007|gb|EDS43390.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 706 Score = 61.3 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 54/140 (38%), Gaps = 8/140 (5%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-DPCTIQEWN-EGKIPLLF 113 +K + + A+ ++ A D ++ G T + ++ + Sbjct: 502 LKEGQKFLIFAHHIKMLDAVSRELDKLKVDHIRIDGTTRSDVRSELVNKFQTKDACRAAI 561 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 +C G+ L +++F L W+ +R + G + AV V YL+A+ Sbjct: 562 LSLKACNAGITLTA-AQLVIFAELDWNPSTL-----AQAESRAHRIGQEGAVLVRYLLAK 615 Query: 174 NTIDELVLQRLRTKSTIQDL 193 T D+++ L+ K T+ + Sbjct: 616 GTADDIIWTMLQKKQTVLNK 635 >gi|117646914|emb|CAL37572.1| hypothetical protein [synthetic construct] Length = 1077 Score = 61.3 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 321 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHL 380 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G GL + +VF L+WD + R + Sbjct: 381 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRI 434 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 435 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 477 >gi|119632034|gb|EAX11629.1| zinc finger, RAN-binding domain containing 3, isoform CRA_a [Homo sapiens] Length = 1030 Score = 61.3 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 266 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHL 325 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G GL + +VF L+WD + R + Sbjct: 326 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRI 379 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 380 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 422 >gi|156407998|ref|XP_001641644.1| predicted protein [Nematostella vectensis] gi|156228783|gb|EDO49581.1| predicted protein [Nematostella vectensis] Length = 532 Score = 61.3 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 51/167 (30%), Gaps = 19/167 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----- 92 GA+ + + ++ +V H L + + Sbjct: 355 GALLNYFCETSASKIAAVRNYVLDLL--EGGHKFLVFGHHQDMLDAISDCLMHKKYSYIR 412 Query: 93 -----TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 K ++ + + + GL L G +VF L+W+ Sbjct: 413 IDGKTPSSKRQMLCDQFQKDKNTVVAVLSITAANTGLTLTE-GTAVVFAELFWNPGALV- 470 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G K +V ++YL+A+ T D+ + ++ K + Sbjct: 471 ----QAEDRVYRIGQKNSVNIHYLVAKGTADDYLWPLIQHKLDVLSK 513 >gi|117646930|emb|CAL37580.1| hypothetical protein [synthetic construct] Length = 1077 Score = 61.3 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 321 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHL 380 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G GL + +VF L+WD + R + Sbjct: 381 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRI 434 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 435 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 477 >gi|309811323|ref|ZP_07705110.1| SNF2 family N-terminal domain protein [Dermacoccus sp. Ellin185] gi|308434630|gb|EFP58475.1| SNF2 family N-terminal domain protein [Dermacoccus sp. Ellin185] Length = 842 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + + + + G+NLQ+ ++L+ + L W+ + +Q I R+ Sbjct: 497 DRRKALVDYFRTEGT--IMIATEAAAEGINLQF-CSMLINYDLPWNPQRVEQRIGRV--- 550 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + I ++ +L+ L K + + A Sbjct: 551 --HRFGQKHNVVVVNFSNKGNIAEQRILELLTNKFQLFSSVFGA 592 >gi|301770701|ref|XP_002920769.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like [Ailuropoda melanoleuca] Length = 1087 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCT 100 K A++ I+ + F L+ + Sbjct: 336 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKARYIRIDGSVPSSERIHL 395 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ + + + G GL +VF L+WD + R + Sbjct: 396 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ATHVVFAELYWDPGHI-----KQAEDRAHRI 449 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YL+A T+D L+ L K+ + LN K++ Sbjct: 450 GQCTSVNIHYLVANGTLDTLMWGMLNRKTQVTGSTLNGRKEQL 492 >gi|297279766|ref|XP_001087747.2| PREDICTED: DNA repair and recombination protein RAD54-like, partial [Macaca mulatta] Length = 185 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 58/177 (32%), Gaps = 42/177 (23%) Query: 32 CLQLANGAVYYDEEKHWKEVH---------------------DEKIKALEVII---EKAN 67 +L N ++ +E K+ L+ I+ + Sbjct: 12 LKKLCNHPALIHDKCVEEEDGFVGALDLFPPGYSSKALEPQLSGKMLVLDYILAVTRSCS 71 Query: 68 AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--LLFAH 115 + +++ ++ L +K ++ K ++ +N P + Sbjct: 72 SDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLS 131 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G GLNL G N LV F W+ + + R + G K+ ++Y L++ Sbjct: 132 SKAGGCGLNL-IGANRLVMFDPDWNPAN-----DEQAMARVWRDGQKKTCYIYRLLS 182 >gi|269860253|ref|XP_002649849.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348] gi|220066790|gb|EED44262.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348] Length = 878 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 67/205 (32%), Gaps = 32/205 (15%) Query: 15 LQGENI---EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA-- 69 L+ + I A + + L+ A+ +++ + + K AL II Sbjct: 663 LEDKEINYSTAKHHLAILKDILKAASHPMHF---SKTESIISTKTMALFDIINMCGGFEN 719 Query: 70 ---PIIVAYHFNSDLARLQKAFPQGRTLDK---DPCTIQEWNEGKIPLLFAHPASCGHGL 123 +I+ + L + + K + E N K + Sbjct: 720 MRNKMIIFFQNKKTLDIVYNELKKNNVNLKVLSNDIKYNEINNNKTDINIIANEFNNSDA 779 Query: 124 NLQY-------------GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + NI+VF+ W+ + + R + G K+ V V L Sbjct: 780 TILLSTTLLGGLGLNLTMVNIVVFYEHDWNP-----FNDLQAMDRAHRLGQKQIVNVIRL 834 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I ++TI+E V+ K I + ++ Sbjct: 835 IVKDTIEEKVMNYQNFKKYISEHII 859 >gi|281337653|gb|EFB13237.1| hypothetical protein PANDA_009544 [Ailuropoda melanoleuca] Length = 1008 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCT 100 K A++ I+ + F L+ + Sbjct: 261 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKARYIRIDGSVPSSERIHL 320 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ + + + G GL +VF L+WD + R + Sbjct: 321 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ATHVVFAELYWDPGHI-----KQAEDRAHRI 374 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YL+A T+D L+ L K+ + LN K++ Sbjct: 375 GQCTSVNIHYLVANGTLDTLMWGMLNRKTQVTGSTLNGRKEQL 417 >gi|47221566|emb|CAF97831.1| unnamed protein product [Tetraodon nigroviridis] Length = 1989 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 71/223 (31%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR----------LQKAFPQ 90 E + K+ L+ ++ K ++V L + Sbjct: 997 MYEGNSLVKSSGKLMLLQKMMRKLKEGGHRVLVFSQMTKMLDLLEDFLENEGYKYERIDG 1056 Query: 91 GRTLDKDPCTIQEWNEGKIPL----------------------------------LFAHP 116 G T + I +N + Sbjct: 1057 GVTGNMRQEAIDRFNGEFKAVVCLDFKTQLQRSNNVLTFCLLSSSFTAPGAPQFAFLLST 1116 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEE-----------HQQMIER-------------IG 152 + G G+NL + ++ + W+ + +R Sbjct: 1117 RAGGLGINL-ASADTVIIYDSDWNPHNDIQVCSATARICVFVSDRIKEDNAVCFVGALQA 1175 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +R + G R V +Y + + +++E + Q + K + L++ Sbjct: 1176 FSRAHRIGQNRKVMIYRFVTKASVEERITQVAKKKMMLTHLVV 1218 >gi|312219860|emb|CBX99802.1| hypothetical protein [Leptosphaeria maculans] Length = 994 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 48/173 (27%), Gaps = 32/173 (18%) Query: 52 HDEKIKALEVI-IEKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDPCT 100 D K + IV + L ++ A Q + + Sbjct: 800 KDAKWCVNLDCCVWFEADVISIVFSTWRMTLDIIEAALEQAQIRSVRFDGKVAQTQRQPV 859 Query: 101 IQEWN-EGKIPLLFAHPASCGHG--------------LNLQ-YGGNILVFFSLWWDLEEH 144 + E+ + ++ G + L + W+ Sbjct: 860 LNEFKSNPNVRIILLTLECGAVGSVGPPASIKNANCIIRLTLTAASRAYLMEPHWNPT-- 917 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E + R + G KR V +++ +E V++ K + +LL+ Sbjct: 918 ---VEEQALARIHRIGQKREVTTIRFYIRDSFEERVIETQEAKKNLASVLLSG 967 >gi|242042115|ref|XP_002468452.1| hypothetical protein SORBIDRAFT_01g046180 [Sorghum bicolor] gi|241922306|gb|EER95450.1| hypothetical protein SORBIDRAFT_01g046180 [Sorghum bicolor] Length = 976 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 53/156 (33%), Gaps = 22/156 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ---------------KAFPQGRTLDKD 97 K + + +A ++V + L L+ T ++ Sbjct: 766 KAKFIHNLLSLSEAAGEKVLVFSQYVRSLHFLETLFTKMKGWKPGVNTFLMDGSSTQEQR 825 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N K + F +CG G++L G + +V + + + R + R Sbjct: 826 EQAIERFNNSPKAKVFFGSIKACGEGISL-VGASRIVILDVHENPA-----VMRQAIGRA 879 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + V+ Y L+A + +E K + Sbjct: 880 FRPGQSKVVYCYRLVASGSSEEEDHYIAFKKERVSK 915 >gi|148553123|ref|YP_001260705.1| helicase domain-containing protein [Sphingomonas wittichii RW1] gi|148498313|gb|ABQ66567.1| helicase domain protein [Sphingomonas wittichii RW1] Length = 1167 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + ++ I+ + + K L+ + G G+NLQ G+++V + L W+ + +Q Sbjct: 541 HGGVSREERRKVIERFMQDKDLLVLIANDAAGEGVNLQR-GHLMVNYDLPWNPNKLEQRF 599 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A +T + V RL K L Sbjct: 600 GRI-----HRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREALGG 643 >gi|322792699|gb|EFZ16567.1| hypothetical protein SINV_11659 [Solenopsis invicta] Length = 81 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++F+ W+ +++ + R + G + V VY LI + TI+E +LQR R KS + Sbjct: 19 QVIFYDSDWNPT-----VDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEV 73 >gi|322505021|emb|CAM42238.2| putative DNA helicase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1096 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++P E + S G G N + +VF L W+ H Q +R+ Sbjct: 521 PPAQREPAAEHFRTEATCTVAILSMQSSGTGHNFT-CASTVVFTELDWNPSTHLQCEDRV 579 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + YL+A+ T D ++ L+ K ++ +L Sbjct: 580 -----HRIGQAQPCRIKYLLAEGTSDSVIWPLLQAKLSVTTAMLE 619 >gi|303288149|ref|XP_003063363.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226455195|gb|EEH52499.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 2005 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 6/93 (6%) Query: 95 DKDPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + E+ + K+ L+ G NL + + L + + Sbjct: 1899 HQQCAALDEFQKEKLRPGDARVLMLLSRDESASGANLTTANHAIFVHPLETNTQYEYDAS 1958 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 E + R R+ G + V V+ LIA++TI+E + Sbjct: 1959 ETQAIGRIRRYGQTKLVHVHRLIAKDTIEEKIY 1991 >gi|154338209|ref|XP_001565329.1| DNA helicase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1096 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++P E + S G G N + +VF L W+ H Q +R+ Sbjct: 521 PPAQREPAAEHFRTEATCTVAILSMQSSGTGHNFT-CASTVVFTELDWNPSTHLQCEDRV 579 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + YL+A+ T D ++ L+ K ++ +L Sbjct: 580 -----HRIGQAQPCRIKYLLAEGTSDSVIWPLLQAKLSVTTAMLE 619 >gi|154246918|ref|YP_001417876.1| helicase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154161003|gb|ABS68219.1| helicase domain protein [Xanthobacter autotrophicus Py2] Length = 1167 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + ++ ++ + + K L+ + G G+NLQ G+++V + L W+ + +Q Sbjct: 541 HGGVSREERRKVVERFMQDKDMLVLIANDAAGEGVNLQR-GHLMVNYDLPWNPNKIEQRF 599 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A +T + V RL K L Sbjct: 600 GRI-----HRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREALGG 643 >gi|67523009|ref|XP_659565.1| hypothetical protein AN1961.2 [Aspergillus nidulans FGSC A4] gi|40745970|gb|EAA65126.1| hypothetical protein AN1961.2 [Aspergillus nidulans FGSC A4] gi|259487320|tpe|CBF85901.1| TPA: SNF2 family helicase, putative (AFU_orthologue; AFUA_4G10830) [Aspergillus nidulans FGSC A4] Length = 1502 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 19/196 (9%) Query: 8 QRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 ++ L G + + ++ ++ K +A + + H + +I Sbjct: 833 RKAKQTFLNGIYKELPPYSPLTQ-TKL--IATASAKLTYLLDQVQEHSK--AEKIIIFYD 887 Query: 66 ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 N + +A + + ++ I ++ +L HGL++ Sbjct: 888 NNNSAYWIAEGLELLGVDFRIYANTLKPTLREEYLILFREFEQVRVLLMDLRQASHGLHI 947 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + + + Q IE + R + G R VFV L+ ++T+++ +LQR Sbjct: 948 -AQASRVYIVNP-----IWQPNIESQAIKRAHRIGQTRPVFVETLVLRDTLEDKILQR-- 999 Query: 186 TKS----TIQDLLLNA 197 K+ IQ+ LL+ Sbjct: 1000 RKAMADVEIQNDLLDD 1015 >gi|307106882|gb|EFN55126.1| hypothetical protein CHLNCDRAFT_57917 [Chlorella variabilis] Length = 914 Score = 60.9 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 6/99 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + ++ + + + G GL+ +++VF L ++ R Sbjct: 799 DRRQAVRRFHSDSAVRVALLSVTAAGVGLDF-SAASVVVFAELPDEVAHV-----RQAED 852 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G + V VY+L A+ T D+ Q L Sbjct: 853 RAHRQGQRHPVNVYFLCAKGTADDRRWQALNRSLARASA 891 >gi|297721831|ref|NP_001173279.1| Os03g0165266 [Oryza sativa Japonica Group] gi|255674231|dbj|BAH92007.1| Os03g0165266 [Oryza sativa Japonica Group] Length = 1078 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 22/156 (14%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLAR---------------LQKAFPQGRTLDKD 97 K + + +A ++V + L G T D+ Sbjct: 881 KAKFVHNLLSLSEATGGKVLVFSQYVRSLIFLEKLVSRMKGWKSEVHIFRVTGGSTQDQR 940 Query: 98 PCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + F +CG G++L G + +V + + + R + R Sbjct: 941 EQAVHRFNNSPDARVFFGSIKACGEGISL-VGASRIVILDVHENPS-----VMRQAIGRA 994 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G + V+ Y L+A ++ +E K + Sbjct: 995 YRPGQSKMVYCYRLVAADSPEEDDHHTAFKKERVSK 1030 >gi|193785976|dbj|BAG54763.1| unnamed protein product [Homo sapiens] Length = 827 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 69 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHL 128 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + G GL + +VF L+WD + R + Sbjct: 129 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRI 182 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 183 GQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 225 >gi|255293151|dbj|BAH90243.1| DEAD/DEAH box helicase-like protein [uncultured bacterium] Length = 1170 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + ++ ++ + + K L+ + G G+NLQ G+++V + L W+ + +Q Sbjct: 541 HGGVSREERRKVVERFMQDKDMLVLIANDAAGEGVNLQR-GHLMVNYDLPWNPNKIEQRF 599 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A +T + V RL K L Sbjct: 600 GRI-----HRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREALGG 643 >gi|312131273|ref|YP_003998613.1| snf2-related protein [Leadbetterella byssophila DSM 17132] gi|311907819|gb|ADQ18260.1| SNF2-related protein [Leadbetterella byssophila DSM 17132] Length = 773 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 81/212 (38%), Gaps = 29/212 (13%) Query: 7 FQRELYCDLQGENIEAFNS----------ASK-TVKCLQLANGAVYYDEEKHWKEVHDEK 55 QRE++ L + + ++ K L +G D+E+ ++ Sbjct: 489 VQREMHAQLAQKVSMIVSKKLKTPYDWQMLTQYLQKMRMLCDGVFLLDQEQDISPKL-KE 547 Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN 105 ++ + + +++ + + L ++ + + + ++N Sbjct: 548 LEEILLEKLDLKVQKVLIFSEWLAVLDKIAIILQRNEIDFAVLTGNVPVKSRQKLVDQFN 607 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + + GLNLQ + ++ F L W+ + Q I RI Q+ + Sbjct: 608 TDQRCRVFLCTETAG-SGLNLQS-ADTVINFELPWNPAKKNQRIGRIDRIGQKNSK---- 661 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + LI +++I+ ++Q L+ K + D +L Sbjct: 662 LTIINLIMRDSIETKLIQGLKLKQDLFDSILE 693 >gi|296329092|ref|ZP_06871597.1| SNF2 family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153811|gb|EFG94624.1| SNF2 family helicase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 628 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 54/121 (44%), Gaps = 8/121 (6%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++ + ++ E +I +L +P + ++L + +++ ++L Q Sbjct: 493 YGSTSEEERRDILNKFKEKEIDVLITNPHTLAESVSLHSVCHDAIYYEYSYNLVHLLQSK 552 Query: 149 ERIGVTRQRQAGFKRAVFVY-YLIAQN----TIDELVLQRLRTKSTIQDLLLNALKKETI 203 +RI ++ + + F++ + ++ ++D+ + QRL K I L A+ K+ + Sbjct: 553 DRIHRLGLKEGQYTQYYFLHSIFLTRDGFEYSLDQKIYQRLLEKERIM---LEAIDKDIL 609 Query: 204 H 204 Sbjct: 610 E 610 >gi|302885904|ref|XP_003041843.1| hypothetical protein NECHADRAFT_53012 [Nectria haematococca mpVI 77-13-4] gi|256722749|gb|EEU36130.1| hypothetical protein NECHADRAFT_53012 [Nectria haematococca mpVI 77-13-4] Length = 687 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 19/120 (15%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKD-----------PCTIQEWNEGK--IPLLFAHPAS 118 IV + S L L++ + + + + IP+L + Sbjct: 571 IVFTAWRSTLDLLERMLTENGIQCRRIDGRVSISDRTERLKDFQFDPENSIPVLLLSIET 630 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GL L + + W+ Q + R + G KR V + I QNT++E Sbjct: 631 GAVGLTLTA-ADRVHIVEPQWNPSVEQ-----QAIGRALRIGQKRKVTIVKYIVQNTVEE 684 >gi|148654421|ref|YP_001274626.1| helicase domain-containing protein [Roseiflexus sp. RS-1] gi|148566531|gb|ABQ88676.1| helicase domain protein [Roseiflexus sp. RS-1] Length = 1116 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 18/150 (12%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKI 109 E + + I++ L L+ G L + + + Sbjct: 482 EQLNQNHPGEKILIFTESRDTLEHLEKNVRLWGYSVCTIHGGMDLASRIQAEKTFKN-EA 540 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ A A+ G+NLQ+ ++++ + + W+ +Q + RI + G R VFV+ Sbjct: 541 QIMVATEAAG-EGINLQF-CHLMINYDIPWNPNRLEQRMGRI-----HRYGQTREVFVFN 593 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 L+A +T + V Q + K L + K Sbjct: 594 LVATDTREGRVWQAVFRKLEEIRQALGSDK 623 >gi|331091942|ref|ZP_08340774.1| hypothetical protein HMPREF9477_01417 [Lachnospiraceae bacterium 2_1_46FAA] gi|330402841|gb|EGG82408.1| hypothetical protein HMPREF9477_01417 [Lachnospiraceae bacterium 2_1_46FAA] Length = 2591 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T K + G++ +L G G N+Q L W + +Q Sbjct: 2181 FIHEAGTETKKAELFAKVRSGQVRVLLGSTPKLGAGTNIQDRLIALHHLDCPWKPADLEQ 2240 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V ++ + +NT D + Q L K ++ + Sbjct: 2241 QEGRILR----QGNQNKKVKIFRYVTENTFDAYMWQILENKQKFISQIMTS 2287 >gi|322499377|emb|CBZ34450.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1102 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++P E + S G G N + +VF L W+ H Q +R+ Sbjct: 521 PPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFT-CASTVVFTELDWNPSTHLQCEDRV 579 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + YL+A+ T D ++ L+TK ++ + Sbjct: 580 -----HRIGQAQPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFE 619 >gi|321399531|emb|CAM68321.2| putative DNA helicase [Leishmania infantum JPCM5] Length = 1102 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++P E + S G G N + +VF L W+ H Q +R+ Sbjct: 521 PPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFT-CASTVVFTELDWNPSTHLQCEDRV 579 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + YL+A+ T D ++ L+TK ++ + Sbjct: 580 -----HRIGQAQPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFE 619 >gi|146087740|ref|XP_001465890.1| DNA helicase [Leishmania infantum JPCM5] Length = 935 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++P E + S G G N + +VF L W+ H Q +R+ Sbjct: 521 PPAQREPAAEHFRTEATCTVAILSMQSSGIGHNFT-CASTVVFTELDWNPSTHLQCEDRV 579 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + + YL+A+ T D ++ L+TK ++ + Sbjct: 580 -----HRIGQAQPCHIKYLLAEGTSDSVIWPLLQTKLSVTAAMFE 619 >gi|33146888|dbj|BAC79886.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group] Length = 637 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N GK +L A +C G++L G + LV W+ + R + Sbjct: 502 RSDVMDKFNGDSAGKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKT-----RQAI 555 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G +R V+VY L+A T +E R K+ + ++ Sbjct: 556 ARAFRRGQERTVYVYLLVASGTWEEEKYNSNRRKAWMSKMVF 597 >gi|322501559|emb|CBZ36638.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 908 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 7/92 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + L + G GLNL G + ++ ++ + V R + G + V Sbjct: 739 QPGVFLFLISTRAGGTGLNLT-GADTVILLDGDFNP-----HNDLQAVDRCHRIGQRNPV 792 Query: 166 FVYYLIAQNTID-ELVLQRLRTKSTIQDLLLN 196 VY L++ +T++ E + K ++ L+L Sbjct: 793 AVYRLVSPHTVEDERHSGIVDRKLKLEHLVLG 824 >gi|291615513|ref|YP_003522621.1| helicase domain protein [Nitrosococcus halophilus Nc4] gi|291582575|gb|ADE17031.1| helicase domain protein [Nitrosococcus halophilus Nc4] Length = 938 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 53/137 (38%), Gaps = 19/137 (13%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQK------------AFPQGRTLDKDPCTIQEWNEG 107 E ++ K +++ + + L++ G++ D+ I + + Sbjct: 523 EQVLTKNPDEKVLIFTEYRATQDYLRETLVARFGADKVEIICGGQSQDERRAAIARFEDK 582 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + G G+NLQ +++ F L W+ Q I R+ + G + V V Sbjct: 583 GQ--FLVSTEAGGEGINLQRYCHVVFNFDLPWNPMRLVQRIGRL-----YRYGQDKRVIV 635 Query: 168 YYLIAQNTIDELVLQRL 184 + + A +T+D ++ L Sbjct: 636 FNVHAPDTLDAQIMDTL 652 >gi|163816654|ref|ZP_02208017.1| hypothetical protein COPEUT_02844 [Coprococcus eutactus ATCC 27759] gi|158447911|gb|EDP24906.1| hypothetical protein COPEUT_02844 [Coprococcus eutactus ATCC 27759] Length = 1101 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + +N+GK+ +L G G N+Q + W + Q Sbjct: 764 YIHDAATDAQRKKIEKSFNDGKVRILIGSTMKLGIGANVQERLIAVHHLDQPWRPADMVQ 823 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q VF+Y + +++ D Q L K L+ Sbjct: 824 RQGRILR----QGNLNSEVFIYRYVTESSFDSYTWQILENKQKFIAQFLSG 870 >gi|254450245|ref|ZP_05063682.1| helicase domain protein [Octadecabacter antarcticus 238] gi|198264651|gb|EDY88921.1| helicase domain protein [Octadecabacter antarcticus 238] Length = 937 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 49/116 (42%), Gaps = 17/116 (14%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + G + +L + G GLNLQ+ +I+V F + W+ +Q I R+ Sbjct: 520 RGRAQRAF-SGNVRILV-STDAGGEGLNLQF-CHIIVNFDMPWNPMRVEQRIGRVD---- 572 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL---------LLNALKKETI 203 + G V + ++T++ V + L K + ++++++ E + Sbjct: 573 -RIGQPHIVRAINFVLEDTVEHRVREVLEAKLAVIAEEFGVDKVADVMDSVESEPL 627 >gi|227544624|ref|ZP_03974673.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] gi|227185390|gb|EEI65461.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] Length = 73 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 5/69 (7%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L+++ L W LE +QQ R+ + G ++ V ++++I + TIDE +L L+ K Q Sbjct: 2 LIWYGLTWSLELYQQTNARLW-----RQGQRQPVVIHHIITEGTIDENILAALKRKDKTQ 56 Query: 192 DLLLNALKK 200 L+NA+K Sbjct: 57 LALINAVKA 65 >gi|227515541|ref|ZP_03945590.1| SNF2 family DNA/RNA helicase [Lactobacillus fermentum ATCC 14931] gi|227086154|gb|EEI21466.1| SNF2 family DNA/RNA helicase [Lactobacillus fermentum ATCC 14931] Length = 630 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 57/165 (34%), Gaps = 21/165 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDP 98 V K + +I+K + ++V F +D+ Sbjct: 445 VESPKFEMGIDLIDKLVSQGKKVLVWGMFVGTMQKITDTLNDMGIKTTLVYGATPKQDRE 504 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + G +L ++P + G ++L + V+F ++L Q +RI Sbjct: 505 GMINNFRTGDAQVLVSNPNTLGESISLHQTVHDAVYFEYNFNLTFMLQSRDRINRLGLPA 564 Query: 159 AGFKRAVFVYYLIAQ------NTIDELVLQRLRTKSTIQDLLLNA 197 + R YYL+ + ID V ++L+ K + ++ Sbjct: 565 NQYTR---YYYLMTKGDVAHMGFIDSTVYKKLKDKEKVMIDAIDG 606 >gi|297800006|ref|XP_002867887.1| hypothetical protein ARALYDRAFT_914628 [Arabidopsis lyrata subsp. lyrata] gi|297313723|gb|EFH44146.1| hypothetical protein ARALYDRAFT_914628 [Arabidopsis lyrata subsp. lyrata] Length = 94 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G GLNL + + WW+ +Q I RI + G KR VFV I + Sbjct: 1 MSLKAGGVGLNLTATSS-VFLMDPWWNPAVEEQAIMRI-----HRIGQKRTVFVRRFIVK 54 Query: 174 NTIDELVLQRLRTKSTIQDLLL--NALKKETIH 204 +T++E + Q K + D L ++ E + Sbjct: 55 DTVEERMQQVQARKQRMIDGALTDEEVRSERLE 87 >gi|124513860|ref|XP_001350286.1| DNA helicase, putative [Plasmodium falciparum 3D7] gi|23615703|emb|CAD52695.1| DNA helicase, putative [Plasmodium falciparum 3D7] Length = 906 Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 6/139 (4%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCG 120 ++ + + F + ++K I+ N+ + + +CG Sbjct: 664 LLFCHHKLVMDEVETFLKEQKCSYIRVDGLTPMEKREIYIKNFQNDDNVKIALLSITACG 723 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL N +VF L+W + Q +R V ++YLIAQNTIDE+V Sbjct: 724 MGLNLTA-ANTVVFGELFWVPGQIIQAEDRAHRIGTAHDV----VNIHYLIAQNTIDEIV 778 Query: 181 LQRLRTKSTIQDLLLNALK 199 + + K LN ++ Sbjct: 779 WKIINRKWNTLTTALNGIE 797 >gi|25148958|ref|NP_498401.2| hypothetical protein C16A3.1 [Caenorhabditis elegans] gi|20451185|gb|AAM22028.1|U41534_4 Hypothetical protein C16A3.1b [Caenorhabditis elegans] Length = 686 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + I + + G G+ L +++VF + ++ Sbjct: 524 PSHRRTALCDSFQTDDNIRVAVLSITAAGVGITLTA-ASVVVFAEIHFNPGYLV-----Q 577 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G K +VFV YLIA+ T D+++ ++ K + + Sbjct: 578 AEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDVLGQV 620 >gi|321258025|ref|XP_003193785.1| hypothetical protein CGB_D7250W [Cryptococcus gattii WM276] gi|317460255|gb|ADV21998.1| Hypothetical protein CGB_D7250W [Cryptococcus gattii WM276] Length = 1059 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 25/196 (12%), Positives = 66/196 (33%), Gaps = 24/196 (12%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEK--ANA 68 A + + ++ ++ E ++ K++ L+++I K A Sbjct: 7 AKSVRNILMELRKVCQHPYLSAPELEAFDLPPEEQHRQLLNASGKLQFLKLLIPKLIARG 66 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYG 128 I++ + + ++ ++ LQ+ Sbjct: 67 HRILLFSQISCMAIISSICVLTEIPNKHRGKSPWTYSMRLTQIII--------YFFLQHE 118 Query: 129 --GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 L++ I I + R + G K+ V V+ L+ + +++E ++ + + Sbjct: 119 LEAWGLIWPPQTRSFCTTLISI-LIRINRAYRYGQKKTVLVFKLMVKGSVEETIMNKGKR 177 Query: 187 KSTIQDLLLNALKKET 202 K + L++ + KET Sbjct: 178 KMVLDHLVVQQMGKET 193 >gi|325495636|gb|EGC93500.1| DarB [Escherichia fergusonii ECD227] Length = 2221 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 16/198 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----------KEVHDEKIKALEVIIE 64 +G+ I + ++ K ++ A+ + K K K + Sbjct: 1334 EGKQIIFTDEKTQHQKLKRIICNALNLEPSKVGILNAQTVAEAGKTGKKLKAVKPPKELP 1393 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 I Y+ L A +L ++ EG+ P++ + G+N Sbjct: 1394 DEPTDAQIAKYNEQMALYDAYIAQQNEMSLGGLEKIAADFQEGRTPIIICN-KKAEVGIN 1452 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + +L W Q R +A V V+Y + + DE L+ L Sbjct: 1453 LHRGTTDIHHLTLPWTPASIAQRNGRGARVGSNRAS----VRVHYYCGKGSFDEYRLKTL 1508 Query: 185 RTKSTIQDLLLNALKKET 202 + K+ +L + K E Sbjct: 1509 KRKAGWISDILRSDKSEM 1526 >gi|25013144|gb|AAN71685.1| SD19050p [Drosophila melanogaster] Length = 1285 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ + I + IIV + + L + +A ++ CT ++++ Sbjct: 1116 GDFSTKISSVVELVLKIKGENEQEKIIVFSQWQAILIEIARALSLNGIQFRNKCTNKDFD 1175 Query: 106 E-----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + L + GLNL + + + ER + R + G Sbjct: 1176 DFKNPLSNVTCLLMPLSKGSKGLNL-IEATHVFLVEPILNPGD-----ERQAIGRIHRFG 1229 Query: 161 FKRAVFVYYLIAQNTIDELVLQR---------LRTKSTIQDLLLNALKK 200 KR V+ I T++E +L L T ++++ L++LKK Sbjct: 1230 QKRPTKVHRFIVNGTVEENILSLITSADDTTTLSTHWDLENMTLDSLKK 1278 >gi|331649967|ref|ZP_08351043.1| conserved hypothetical protein [Escherichia coli M605] gi|331041224|gb|EGI13378.1| conserved hypothetical protein [Escherichia coli M605] Length = 2255 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 16/198 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----------KEVHDEKIKALEVIIE 64 +G+ I + ++ K ++ A+ + K K K + Sbjct: 1368 EGKQIIFTDEKTQHQKLKRIICNALNLEPSKVGILNAQTVAEAGKTGKKLKAVKPPKELP 1427 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + Y+ L A +L ++ EG+ P++ + G+N Sbjct: 1428 DEPTDAQLAKYNEQMALYDAYIAQQNEMSLGGLEKIAADFQEGRTPIIICN-KKAEVGIN 1486 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + +L W Q R +A V V+Y + + DE L+ L Sbjct: 1487 LHRGTTDIHHLTLPWTPASIAQRNGRGARVGSNRAS----VRVHYYCGKGSFDEYRLKTL 1542 Query: 185 RTKSTIQDLLLNALKKET 202 + K+ +L + K E Sbjct: 1543 KRKAGWISDILRSDKSEM 1560 >gi|306833660|ref|ZP_07466787.1| SNF2 family protein [Streptococcus bovis ATCC 700338] gi|304424430|gb|EFM27569.1| SNF2 family protein [Streptococcus bovis ATCC 700338] Length = 2274 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1902 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1961 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q R V +Y+ I + + D + Q K ++ + Sbjct: 1962 RNGRLIR----QGNMHREVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 2008 >gi|302421852|ref|XP_003008756.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261351902|gb|EEY14330.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 2359 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 52/156 (33%), Gaps = 7/156 (4%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 G +Y + + + ++ +N + A F++ D Sbjct: 743 GRSFYAPVDSCSAMARSALDDEKALLFVSN--KKLKAQLFDALAEDDNVDVYMTTGTHHD 800 Query: 98 PCTIQEW----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I+ + GK +L S N ++F + + M R Sbjct: 801 TDAIRYFKEPNENGKTKVLVQSLMSEESAGTNLTEANHVMFAAPLHTDRRNHYMYMRQAR 860 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQ-RLRTKS 188 R + G R V VY+ + +T++ VL+ RLR K Sbjct: 861 GRAIRFGQTRPVKVYHFVTAHTMEVDVLEHRLRHKL 896 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 5/125 (4%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW----NEGKIPLLFAHPASCGHGLN 124 + A F++ D I+ + GK +L S Sbjct: 2156 NKKLKAQLFDALAEDDNVDVYMTTGTHHDTDAIRYFKEPNENGKTKVLVQSLMSEESAGT 2215 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ-R 183 N ++F + + M R R + G R V VY+ + +T++ VL+ R Sbjct: 2216 NLTEANHVMFAAPLHTDRRNHYMYMRQARGRAIRFGQTRPVKVYHFVTAHTMEVDVLEHR 2275 Query: 184 LRTKS 188 LR K Sbjct: 2276 LRHKL 2280 >gi|194856372|ref|XP_001968736.1| GG25032 [Drosophila erecta] gi|190660603|gb|EDV57795.1| GG25032 [Drosophila erecta] Length = 754 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 6/99 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + N+ + +C G+ L I+VF L W+ +R Sbjct: 573 RSDFVDTFQNKSSCKVALLSLKACNSGITLTA-AEIIVFAELDWNPSTL-----AQAESR 626 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V YL+A T D+ + L+ K + + Sbjct: 627 AHRIGQTKPVICRYLMAHKTADDTIWNMLKNKQEVLSKV 665 >gi|189241979|ref|XP_967778.2| PREDICTED: similar to TBC1D12: TBC1 domain family, member 12 [Tribolium castaneum] Length = 572 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++F W+ M++ R + G + V VY L+ + TIDE++L R K Sbjct: 449 ADTVIFMDRDWNP-----MVDLQAQDRCHRIGQTKPVMVYSLVTKGTIDEIILNRADVKK 503 Query: 189 TIQDLLL 195 + +++ Sbjct: 504 RLGKVVI 510 >gi|169830470|ref|YP_001716452.1| helicase domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637314|gb|ACA58820.1| helicase domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 578 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 6/88 (6%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G NLQ+ IL+ + L W+ +Q I R+ + G R V +Y L Sbjct: 432 FLVSTDTGSEGRNLQF-CRILINYDLPWNPMRIEQRIGRL-----HRLGQTREVLIYNLS 485 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALK 199 A T++ +L+ L K + L++ L+ Sbjct: 486 AAETVEAHLLELLDAKINMFQLVIGELE 513 >gi|17552194|ref|NP_498400.1| hypothetical protein C16A3.1 [Caenorhabditis elegans] gi|14573807|gb|AAK68177.1|U41534_2 Hypothetical protein C16A3.1a [Caenorhabditis elegans] Length = 687 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + I + + G G+ L +++VF + ++ Sbjct: 525 PSHRRTALCDSFQTDDNIRVAVLSITAAGVGITLTA-ASVVVFAEIHFNPGYLV-----Q 578 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G K +VFV YLIA+ T D+++ ++ K + + Sbjct: 579 AEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDVLGQV 621 >gi|25148960|ref|NP_741192.1| hypothetical protein C16A3.1 [Caenorhabditis elegans] gi|60390949|sp|Q8MNV7|SMAL1_CAEEL RecName: Full=Putative SMARCAL1-like protein gi|20451186|gb|AAM22029.1|U41534_5 Hypothetical protein C16A3.1c [Caenorhabditis elegans] Length = 690 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + I + + G G+ L +++VF + ++ Sbjct: 528 PSHRRTALCDSFQTDDNIRVAVLSITAAGVGITLTA-ASVVVFAEIHFNPGYLV-----Q 581 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G K +VFV YLIA+ T D+++ ++ K + + Sbjct: 582 AEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDVLGQV 624 >gi|323969194|gb|EGB64496.1| hypothetical protein ERHG_04662 [Escherichia coli TA007] Length = 2255 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 16/198 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----------KEVHDEKIKALEVIIE 64 +G+ I + ++ K ++ A+ + K K K + Sbjct: 1368 EGKQIIFTDEKTQHQKLKRIICNALNLEPSKVGILNAQTVAEAGKTGKKLKAVKPPKELP 1427 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 I Y+ L A +L ++ EG+ P++ + G+N Sbjct: 1428 DEPTDAQIAKYNEQMALYDAYIAQQNEMSLGGLEKIAADFQEGRTPIIICN-KKAEVGIN 1486 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + +L W Q R +A V V+Y + + DE L+ L Sbjct: 1487 LHRGTTDIHHLTLPWTPASIAQRNGRGARVGSNRAS----VRVHYYCGKGSFDEYRLKTL 1542 Query: 185 RTKSTIQDLLLNALKKET 202 + K+ +L + K E Sbjct: 1543 KRKAGWISDILRSDKSEM 1560 >gi|260871137|ref|YP_003237917.1| defense against restriction protein [Escherichia coli O111:H- str. 11128] gi|257767716|dbj|BAI39209.1| defense against restriction protein [Escherichia coli O111:H- str. 11128] Length = 2255 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 16/198 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----------KEVHDEKIKALEVIIE 64 +G+ I + ++ K ++ A+ + K K K + Sbjct: 1368 EGKQIIFTDEKTQHQKLKRIICNALNLEPSKVGILNAQTVAEAGKTGKKLKAVKPPKELP 1427 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 I Y+ L A +L ++ EG+ P++ + G+N Sbjct: 1428 DEPTDAQIAKYNEQMALYDAYIAQQNEMSLGGLEKIAADFQEGRTPIIICN-KKAEVGIN 1486 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + +L W Q R +A V V+Y + + DE L+ L Sbjct: 1487 LHRGTTDIHHLTLPWTPASIAQRNGRGARVGSNRAS----VRVHYYCGKGSFDEYRLKTL 1542 Query: 185 RTKSTIQDLLLNALKKET 202 + K+ +L + K E Sbjct: 1543 KRKAGWISDILRSDKSEM 1560 >gi|296204912|ref|XP_002749531.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3 [Callithrix jacchus] Length = 1080 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 57/158 (36%), Gaps = 17/158 (10%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN 105 +K ++ + ++ +V H S L + + + ++ Sbjct: 326 VKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIENKIRYIRIDGSVSSSERIHLVNQFQ 385 Query: 106 -EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL + +VF L+WD + R + G + Sbjct: 386 KDPDTRVAILSIQAAGQGLTFTA-ASHVVFAELYWDPGHI-----KQAEDRAHRIGQCSS 439 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 V ++YLIA T+D L+ L K+ + LN K++ Sbjct: 440 VNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRKEKI 477 >gi|33323519|gb|AAQ07489.1|AF503408_13 DarB [Enterobacteria phage P7] Length = 2255 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 16/198 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----------KEVHDEKIKALEVIIE 64 +G+ I + ++ K ++ A+ + K K K + Sbjct: 1368 EGKQIIFTDEKTQHQKLKRIICNALNLEPSKVGILNAQTVAEAGKTGKKLKAVKPPKELP 1427 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 I Y+ L A +L ++ EG+ P++ + G+N Sbjct: 1428 DEPTDAQIAKYNEQMALYDAYIAQQNEMSLGGLEKIAADFQEGRTPIIICN-KKAEVGIN 1486 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + +L W Q R +A V V+Y + + DE L+ L Sbjct: 1487 LHRGTTDIHHLTLPWTPASIAQRNGRGARVGSNRAS----VRVHYYCGKGSFDEYRLKTL 1542 Query: 185 RTKSTIQDLLLNALKKET 202 + K+ +L + K E Sbjct: 1543 KRKAGWISDILRSDKSEM 1560 >gi|46401635|ref|YP_006479.1| DarB [Enterobacteria phage P1] gi|33338662|gb|AAQ13985.1| DarB [Enterobacteria phage P1] gi|33338771|gb|AAQ14093.1| DarB [Enterobacteria phage P1] Length = 2255 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 16/198 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----------KEVHDEKIKALEVIIE 64 +G+ I + ++ K ++ A+ + K K K + Sbjct: 1368 EGKQIIFTDEKTQHQKLKRIICNALNLEPSKVGILNAQTVAEAGKTGKKLKAVKPPKELP 1427 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 I Y+ L A +L ++ EG+ P++ + G+N Sbjct: 1428 DEPTDAQIAKYNEQMALYDAYIAQQNEMSLGGLEKIAADFQEGRTPIIICN-KKAEVGIN 1486 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + +L W Q R +A V V+Y + + DE L+ L Sbjct: 1487 LHRGTTDIHHLTLPWTPASIAQRNGRGARVGSNRAS----VRVHYYCGKGSFDEYRLKTL 1542 Query: 185 RTKSTIQDLLLNALKKET 202 + K+ +L + K E Sbjct: 1543 KRKAGWISDILRSDKSEM 1560 >gi|331229057|ref|XP_003327195.1| DNA repair protein rad16 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306185|gb|EFP82776.1| DNA repair protein rad16 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 968 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 44/151 (29%), Gaps = 31/151 (20%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFP-----------QGRTLDKDPCTIQEWNEGKI 109 + + + IV F L +++ ++ N + Sbjct: 826 KLNQSDHTIKSIVFSQFTVFLDLIERRLQLAGFKLARLQGNMTPEARNRTIQYFMNNNDV 885 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + G LNL + + WW+ Q ++R Sbjct: 886 QVFLVSLKAGGVALNLTE-ASRVFIMDPWWNPAVELQAMDR------------------- 925 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 LI +N+I+ +++ + K + L + Sbjct: 926 LIIENSIESRIVELQKKKEAMTGAALGDDDQ 956 >gi|302388025|ref|YP_003823847.1| SNF2-related protein [Clostridium saccharolyticum WM1] gi|302198653|gb|ADL06224.1| SNF2-related protein [Clostridium saccharolyticum WM1] Length = 2455 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G++ +L G G N+Q + + W + Q Sbjct: 2073 FIHDADTEAKKKDLFAKVRTGQVRVLLGSTQKMGAGTNVQDRLVAVHHLDVGWRPADMTQ 2132 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V VY + + T D + Q L K ++ + Sbjct: 2133 RNGRIIR----QGNRNKEVQVYQYVTEGTFDAYLYQTLENKQKFISQIMTS 2179 >gi|313885386|ref|ZP_07819136.1| helicase C-terminal domain protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619116|gb|EFR30555.1| helicase C-terminal domain protein [Eremococcus coleocola ACS-139-V-Col8] Length = 393 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 73/198 (36%), Gaps = 30/198 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y +++ D + N +S + AN ++K+K Sbjct: 208 KEYKVIEKDRVLD----DKAYDNPSSLLHGLREHAN--------------RNDKLKY-LE 248 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKA---FPQGRTLDKDPCT--IQEWNEGKIPLLFAHP 116 ++ + I++ Y + S+L +++ +W++ L Sbjct: 249 MLFEGTDNNIVIFYQYTSELEAIKEIAKGKIIFEVNGSKQAIPSKDKWDKVSNSLTLVQY 308 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G+ LQY NI+V+++ + +++ + R + G KR V V+ + TI Sbjct: 309 QAGAAGIELQY-ANIVVYYTPTYSYQDY-----AQSLGRTHRNGQKRKVTVFRFNTEKTI 362 Query: 177 DELVLQRLRTKSTIQDLL 194 ++ V L K L Sbjct: 363 EQAVWSALEKKKDFDKTL 380 >gi|291530902|emb|CBK96487.1| DNA methylase [Eubacterium siraeum 70/3] Length = 2598 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + +G + +L A CG G N+Q L W + +Q Sbjct: 2242 YIHDYNTDVKKQTLFAKVRKGDVRVLLGSTAKCGAGTNVQDKLIALHHLDCPWRPADLEQ 2301 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V++Y + ++T D + Q + K ++ + Sbjct: 2302 REGRIIR----QGNQNDKVYIYRYVTKDTFDAYLYQIIENKQKGISQIMTS 2348 >gi|322493998|emb|CBZ29290.1| helicase-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 991 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 7/93 (7%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + L + G GLNL G + ++ ++ + V R + G + V VY Sbjct: 825 VFLFLISTRAGGTGLNLT-GADTVILLDGDFNP-----HNDLQAVDRCHRIGQQNPVAVY 878 Query: 169 YLIAQNTID-ELVLQRLRTKSTIQDLLLNALKK 200 L++ +T++ E + + K ++ L+L Sbjct: 879 RLVSPHTVEDERHSRIVDGKLKLEHLVLGGDAA 911 >gi|53802914|ref|YP_115393.1| DEAD-box ATP dependent DNA helicase [Methylococcus capsulatus str. Bath] gi|53756675|gb|AAU90966.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Methylococcus capsulatus str. Bath] Length = 1212 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 8/112 (7%) Query: 87 AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G ++ + + N+ + +L A A+ G+NLQ N++V + L W+ + Sbjct: 566 MIHGGVKREERRKVQELFRNDPAVRVLVATDAAG-EGVNLQN-ANLMVNYDLPWNPNRLE 623 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q RI + G ++ ++A T + V QRL K I+ L Sbjct: 624 QRFGRI-----HRIGQTEVCHLWNMVASETREGDVFQRLFEKLEIERQALGG 670 >gi|281207937|gb|EFA82116.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1139 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 55/154 (35%), Gaps = 20/154 (12%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA-------------RLQKAFPQGR 92 +E+ K+ ++ IE+ + II+ FN L R + Sbjct: 871 HKNQEIQSSKLNYIKKRIEEIDGQ-IIIFSQFNEMLYDIIFMIKSDMPQLRFLQYHTGIS 929 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 ++ + ++ + +G+N+ ++ +L + ER Sbjct: 930 KKERADAILTFQTNQDYKVIVMNTDLAAYGINITK-ATHILIVDPIMNLAK-----ERQA 983 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + R + G + V+V L+ +++DE++ + Sbjct: 984 IKRAHRIGQTKPVYVEKLVTTDSVDEVITSMVDR 1017 >gi|167998999|ref|XP_001752205.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162696600|gb|EDQ82938.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1520 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 7/108 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D R + + + + E G + +L +GLNL ++ Sbjct: 1349 DRFRGVEETVGKKRSSRKRANVDEVQ-GPVQVLLMPIRHGANGLNL-VEAQHVMLLEPLL 1406 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + +E + R + G RA FV+ I +T++E + R K Sbjct: 1407 NPA-----MEAQAINRVHRIGQTRATFVHRFIVHDTVEESIYGLRRQK 1449 >gi|87307450|ref|ZP_01089594.1| Helicase, C-terminal [Blastopirellula marina DSM 3645] gi|87289620|gb|EAQ81510.1| Helicase, C-terminal [Blastopirellula marina DSM 3645] Length = 1214 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 4/103 (3%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + K ++ +G + +L A G G N+Q L W E +Q RI Sbjct: 789 SDAKKQALFEKVRQGTVRVLLGSTAKMGTGTNVQKRLIALHHLDAPWKPAEVEQRDGRIL 848 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q + V +Y + + + D + Q L TK+ ++ Sbjct: 849 R----QGNQNKEVAIYRYVTEGSFDAYMWQALETKARFISQVI 887 >gi|283796708|ref|ZP_06345861.1| protein, SNF2 family [Clostridium sp. M62/1] gi|291075592|gb|EFE12956.1| protein, SNF2 family [Clostridium sp. M62/1] Length = 2454 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G++ +L G G N+Q + + W + Q Sbjct: 2072 FIHDADTEAKKKDLFAKVRTGQVRVLLGSTQKMGAGTNVQDRLVAVHHLDVGWRPADMTQ 2131 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V VY + + T D + Q L K ++ + Sbjct: 2132 RNGRIIR----QGNRNKEVQVYQYVTEGTFDAYLYQTLENKQKFISQIMTS 2178 >gi|147865787|emb|CAN81153.1| hypothetical protein VITISV_020819 [Vitis vinifera] Length = 845 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 10/122 (8%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 +F L A + I L + G GL L + ++F Sbjct: 688 YFLMFLKLTYMAGCKFLIFAHHQPMID----SIFQFLVLSIKAGGVGLTLTA-ASTVIFA 742 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 L W + R + G +V ++YL+A +T+D+++ +++K +L Sbjct: 743 ELSWTPGDLI-----QAEDRVHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLENLGQML 797 Query: 196 NA 197 + Sbjct: 798 DG 799 >gi|326670855|ref|XP_003199305.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Danio rerio] Length = 668 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 16/145 (11%), Positives = 46/145 (31%), Gaps = 9/145 (6%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNS--DLARLQKAFPQGRTLDKDPCTIQEWNEGK-I 109 + ++ +++ + + + + + + Sbjct: 483 SDMLECGREKFLVFAHHKLVLDSITKELGEKSISFIRIDGSTPSAERQLLCERFQASQQS 542 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + + GL L ++VF L+W+ R + G V ++Y Sbjct: 543 CVAVLSITAANMGLTLHSAA-LVVFAELFWNPGVLI-----QAEDRVHRIGQTSNVDIHY 596 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLL 194 L+A+ T D+ + ++ K + + + Sbjct: 597 LVAKGTADDYLWPMIQAKMNVLEQV 621 >gi|328848317|gb|EGF97545.1| hypothetical protein MELLADRAFT_85092 [Melampsora larici-populina 98AG31] Length = 206 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 47/145 (32%), Gaps = 7/145 (4%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP- 98 Y + K+V K + +I + + T + Sbjct: 34 AYLVSQLKNKQVPLHKGLCKKTVIYTQWRCFMEWIKIGLDCHGIESGSLHGEMTPQERTL 93 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + N I + G GLN+ + + W+ + QQ I+R+ + Sbjct: 94 QLNRFQNNNNIEAFIVSIEAGGVGLNMT-CADEVYLMDADWNPQIVQQAIDRL-----HR 147 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQR 183 G V VY+++A ++++ + Sbjct: 148 IGQTHPVKVYHVVAGGSVEQHLFNV 172 >gi|225374536|ref|ZP_03751757.1| hypothetical protein ROSEINA2194_00151 [Roseburia inulinivorans DSM 16841] gi|257438036|ref|ZP_05613791.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] gi|225213596|gb|EEG95950.1| hypothetical protein ROSEINA2194_00151 [Roseburia inulinivorans DSM 16841] gi|257199696|gb|EEU97980.1| N-domain protein, SNF2 family [Faecalibacterium prausnitzii A2-165] Length = 2454 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G++ +L G G N+Q + + W + Q Sbjct: 2072 FIHDADTEAKKKDLFAKVRTGQVRVLLGSTQKMGAGTNVQDRLVAVHHLDVGWRPADMTQ 2131 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V VY + + T D + Q L K ++ + Sbjct: 2132 RNGRIIR----QGNRNKEVQVYQYVTEGTFDAYLYQTLENKQKFISQIMTS 2178 >gi|56475568|ref|YP_157157.1| ATP-dependent helicase [Aromatoleum aromaticum EbN1] gi|56311611|emb|CAI06256.1| ATP-dependent helicase [Aromatoleum aromaticum EbN1] Length = 980 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 41/112 (36%), Gaps = 13/112 (11%) Query: 89 PQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T + ++ + E I LL GLNL Y + LV F L W L QQ Sbjct: 484 HGGMTDTEQQSIVERFGRKEDPIRLLLCS-DVASEGLNLHYFCHRLVHFDLPWSLMVFQQ 542 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTI-----DELVLQRLRTKSTIQDL 193 R+ + G + YL + I D +L+ L+ K + Sbjct: 543 RNGRVD-----RYGQTHQPQIIYLFTETRIQRVKGDLRILEILQEKDEQANR 589 >gi|261868298|ref|YP_003256220.1| putative DEAD/DEAH box helicase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413630|gb|ACX83001.1| putative DEAD/DEAH box helicase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 655 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 11/124 (8%) Query: 77 FNSDLARLQ--KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + L R + +T D ++ + + + + G+NLQ+ ++++ Sbjct: 472 YKDWLKRHEGSDKITGSKTADTRAALVEHFKDRGC--IMIATEAGAEGINLQF-CSLIIN 528 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDL 193 + L W+ + +Q I R + G K V V + + N D+ V + L K + + Sbjct: 529 YDLPWNPQRVEQRIGRC-----HRYGQKHDVVVVNFVDETNEADQRVYELLEQKFQLFNG 583 Query: 194 LLNA 197 +L A Sbjct: 584 VLGA 587 >gi|328697302|ref|XP_001945056.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Acyrthosiphon pisum] Length = 656 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 54/173 (31%), Gaps = 7/173 (4%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 + N L+ N + + + I+ + I + Sbjct: 430 SLNKMEVRGALLKYFNHTGEAKLPAICDYILNLLKDGKKFIVFAHHQKVINGICDVLENN 489 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + ++ C ++ E + + G+ L +++F L+W+ Sbjct: 490 ETYYIRIDGKTSSEERKCVCDQFQSEDMYRVAVLSICAANSGITLTA-AKLVIFAELYWN 548 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G V + YL+A+ T D+ + +++K ++ + Sbjct: 549 PGILT-----QAEDRAHRIGQAETVTIQYLLAKGTADDHIWPLIQSKLSVLNK 596 >gi|312964340|ref|ZP_07778639.1| putative helicase [Escherichia coli 2362-75] gi|312290970|gb|EFR18845.1| putative helicase [Escherichia coli 2362-75] Length = 1868 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 16/198 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----------KEVHDEKIKALEVIIE 64 +G+ I + ++ K ++ A+ + K K K + Sbjct: 1334 EGKQIIFTDEKTQHQKLKRIICNALNLEPSKVGILNAQTVAEAGKTGKKLKAVKPPKELP 1393 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 I Y+ L A +L ++ EG+ P++ + G+N Sbjct: 1394 DEPTDAQIAKYNEQMALYDAYIAQQNEMSLGGLEKIAADFQEGRTPIIICN-KKAEVGIN 1452 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + +L W Q R +A V V+Y + + DE L+ L Sbjct: 1453 LHRGTTDIHHLTLPWTPASIAQRNGRGARVGSNRAI----VRVHYYCGKGSFDEYRLKTL 1508 Query: 185 RTKSTIQDLLLNALKKET 202 + K+ +L + K E Sbjct: 1509 KRKAGWISDILRSDKSEM 1526 >gi|170086666|ref|XP_001874556.1| predicted protein [Laccaria bicolor S238N-H82] gi|164649756|gb|EDR13997.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1926 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 3/107 (2%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + +G K N + +L + N +F S + Sbjct: 1819 KYLEIKGTAHQKSKNLELFQNGSEERVLLLNVMDESASGANLTSANHAIFLSPLLAPSQE 1878 Query: 145 QQM-IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 E + R + G +R V+V+ + NTIDE + + + K+ + Sbjct: 1879 IYNACETQAIGRLVRYGQERHVYVWRFLTTNTIDEEIYE--QRKAAV 1923 >gi|255291967|dbj|BAH90453.1| helicase-like protein [uncultured bacterium] gi|255292161|dbj|BAH89287.1| helicase-like protein [uncultured bacterium] gi|255293197|dbj|BAH90288.1| ATP-dependent RNA helicase [uncultured bacterium] Length = 767 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 6/109 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + ++ ++ + + K L+ + G G+NLQ G+++V + L W+ + +Q Sbjct: 541 HGGVSREERRKVVERFMQDKDMLVLIANDAAGEGVNLQR-GHLMVNYDLPWNPNKIEQRF 599 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A +T + V RL K L Sbjct: 600 GRI-----HRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREALGG 643 >gi|54294007|ref|YP_126422.1| hypothetical protein lpl1068 [Legionella pneumophila str. Lens] gi|53753839|emb|CAH15305.1| hypothetical protein lpl1068 [Legionella pneumophila str. Lens] Length = 1128 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 75/215 (34%), Gaps = 35/215 (16%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----VHDEKIKALEVIIEK 65 ++ ++ + + + Y ++++ + ++KA I++K Sbjct: 757 QILNQVKNMESKNGVMLKAIHQLRACSLHPDYKRQDEYINDNEYIGGSARLKACFEILDK 816 Query: 66 A--NAAPIIVAYHFNSD---------------LARLQKAFPQGRTLDKDPCTIQEWNE-- 106 +++ +N L RL A + ++ E Sbjct: 817 IYAKREKVLIFIEYNEWHRHDFLCQIIKTKYKLDRLPMAINGQINSKTRQHIVDKFQEER 876 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK ++ P + G G+ L N ++ + WW+ Q +RI + G + V Sbjct: 877 GKFDVMLLSPRAGGVGITLTA-ANHIIHLTRWWNPAVEDQANDRI-----YRIGQESDVH 930 Query: 167 VYYLIA-----QNT-IDELVLQRLRTKSTIQDLLL 195 +YY +A +N+ D + Q L K + ++ Sbjct: 931 IYYPLAIHAEYENSCFDYNLHQLLEKKREVSQQVI 965 >gi|320039594|gb|EFW21528.1| SNF2 family helicase [Coccidioides posadasii str. Silveira] Length = 1271 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 17/153 (11%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPAS 118 ++II N L + + + +N + +L Sbjct: 941 KIIIFYENNNNAFWVAEGLEMLGVEFRIYASTLKPKLKAEYLALFNNSECVRVLLMDLRQ 1000 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL+L + + + WD IE + R + + V+V L+ ++T+++ Sbjct: 1001 ASHGLHL-ASASRIFIINPIWDP-----NIESQAIKRAHRISQMKPVYVETLVLKDTLED 1054 Query: 179 LVLQRLRT----------KSTIQDLLLNALKKE 201 +L+R + K + D ++++ KE Sbjct: 1055 KMLRRRKQMTNIEMQHAEKDLLDDRTMSSIIKE 1087 >gi|303311435|ref|XP_003065729.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240105391|gb|EER23584.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1271 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 17/153 (11%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPAS 118 ++II N L + + + +N + +L Sbjct: 941 KIIIFYENNNNAFWVAEGLEMLGVEFRIYASTLKPKLKAEYLALFNNSECVRVLLMDLRQ 1000 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL+L + + + WD IE + R + + V+V L+ ++T+++ Sbjct: 1001 ASHGLHL-ASASRIFIINPIWDP-----NIESQAIKRAHRISQMKPVYVETLVLKDTLED 1054 Query: 179 LVLQRLRT----------KSTIQDLLLNALKKE 201 +L+R + K + D ++++ KE Sbjct: 1055 KMLRRRKQMTNIEMQHAEKDLLDDRTMSSIIKE 1087 >gi|13365849|dbj|BAB39310.1| hypothetical protein [Macaca fascicularis] Length = 675 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 66/172 (38%), Gaps = 19/172 (11%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL 81 ++A + Q + E + K++AL ++++K + +++ L Sbjct: 11 HAAPYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILML 70 Query: 82 ARLQKAFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 L+ + ++ ++ +N + +I S G+NL + Sbjct: 71 DILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINL-VEAD 129 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +VF+ + +++ + G + + +Y L++ N+I+E +L+ Sbjct: 130 TVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLK 176 >gi|326929550|ref|XP_003210925.1| PREDICTED: e1A-binding protein p400-like [Meleagris gallopavo] Length = 2997 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 63/167 (37%), Gaps = 19/167 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK 86 + ++ + + + K++AL V+++K + +++ L L+ Sbjct: 1757 LHQLQRITTPQLLQFPDLRLVQYDSGKLEALAVLLQKLKSEGRRVLILSQMILMLDILEL 1816 Query: 87 AFPQGR----------TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 ++ ++ +N + +I S G+NL + +VF+ Sbjct: 1817 FLNFHFLTFVRIDEYANHEQRQELMKSFNRDKRIFCAILSSHSRSTGVNL-VEADTVVFY 1875 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + +++ + G + + +Y L++ N+++E +L+ Sbjct: 1876 DNDLNP-----VMDAKAQEWCDRIGRCKDIHIYRLVSGNSVEEKLLK 1917 >gi|269928744|ref|YP_003321065.1| helicase domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269788101|gb|ACZ40243.1| helicase domain protein [Sphaerobacter thermophilus DSM 20745] Length = 1266 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 65/193 (33%), Gaps = 12/193 (6%) Query: 9 RELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 RE ++ +I +S SK + + + E + + + L + + Sbjct: 714 REEIRYVEDFLHDIRRLSSDSKRERLMTMLGEIFRERETVVIFTQYTDTMDDLREALREV 773 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 + + + K+ +I +L + GLNLQ Sbjct: 774 YGNQVACYSG----RGGEEWRDGEWVPTTKEEIKNAFREGERIKILLCT-EAASEGLNLQ 828 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G +L+ + + W+ +Q I R+ Q V+V +TI+ V +RL Sbjct: 829 TCG-VLINYDMPWNPMRVEQRIGRVDRIGQ----QYPVVWVRNFFYADTIEARVYERLSD 883 Query: 187 KSTIQDLLLNALK 199 + ++ L+ Sbjct: 884 RIDWFTEVVGDLQ 896 >gi|119194229|ref|XP_001247718.1| hypothetical protein CIMG_01489 [Coccidioides immitis RS] Length = 1271 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 9/141 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPAS 118 ++II N L + + + +N + +L Sbjct: 941 KIIIFYENNNNAFWVAEGLEMLGVEFRIYASTLKPKLKAEYLALFNNSECVRVLLMDVRQ 1000 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL+L + + + WD IE + R + + V+V L+ + T+++ Sbjct: 1001 ASHGLHL-ASASRIFIINPIWDP-----NIESQAIKRAHRISQMKPVYVETLVLKGTLED 1054 Query: 179 LVLQRLRTKSTIQDLLLNALK 199 +L+R K +L+A K Sbjct: 1055 KMLRR--RKQMTNIEMLHAEK 1073 >gi|257484419|ref|ZP_05638460.1| helicase/SNF2 domain-containing protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 600 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 54/143 (37%), Gaps = 14/143 (9%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 458 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 517 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 518 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 577 Query: 112 LFAHPASCGHGLNLQYGGNILVF 134 + G GLNL ++ + Sbjct: 578 FLISLKAGGTGLNLTAADTVIHY 600 >gi|296811676|ref|XP_002846176.1| helicase swr1 [Arthroderma otae CBS 113480] gi|238843564|gb|EEQ33226.1| helicase swr1 [Arthroderma otae CBS 113480] Length = 1652 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 52/162 (32%), Gaps = 35/162 (21%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ ++ Sbjct: 1339 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRTLQAGGHRALIFTQMTK 1382 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N + +I S G G+NL G Sbjct: 1383 MLDILEQFLNIHGHRYLRLDGSTKIEQRQLLTERFNSDTRILAFILSSRSGGLGINLT-G 1441 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + ++F+ L W+ +++ R + G R V +Y L Sbjct: 1442 ADTVIFYDLDWNPA-----MDKQCQDRCHRIGQTRDVHIYRL 1478 >gi|58616182|ref|YP_195311.1| DNA helicase [Azoarcus sp. EbN1] gi|56315643|emb|CAI10287.1| DNA helicase [Aromatoleum aromaticum EbN1] Length = 671 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 58/193 (30%), Gaps = 11/193 (5%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 + Y + F T + LQ A E + + K + + V + A Sbjct: 468 QAYQEALNSGTSTFGVLHSTRRFLQEAC----IKEAGKYLKKEVAKDEKMVVFVNYTEDA 523 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYG 128 Y R + K + + + + G++L Sbjct: 524 YAHAEYLTGLGKGRFVVLTGDILSDAKRQELLDCVQRDDSVKGIVGSYGVLAEGVDLWR- 582 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N + S W + R + G R V V I TIDE + + + K+ Sbjct: 583 ANHVYIASQPWTPATLE-----QAEDRCNRLGQTRLVRVEIPIFAGTIDEAIRELISGKA 637 Query: 189 TIQDLLLNALKKE 201 I + +L+ + E Sbjct: 638 EIVEDVLDPEEAE 650 >gi|297571358|ref|YP_003697132.1| SNF2-related protein [Arcanobacterium haemolyticum DSM 20595] gi|296931705|gb|ADH92513.1| SNF2-related protein [Arcanobacterium haemolyticum DSM 20595] Length = 948 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + E+ + L + G+NLQ+ ++LV + L W+ + +Q I R+ Sbjct: 484 DRRKALVDEFRDRGR--LMIATEAAAEGINLQF-CSMLVNYDLPWNPQRIEQRIGRV--- 537 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + + +E +L+ L K + + A Sbjct: 538 --HRFGQKHNVIVVNFSNKGNLAEERILELLTEKFQLFTSVFGA 579 >gi|73984292|ref|XP_533335.2| PREDICTED: similar to zinc finger, RAN-binding domain containing 3 [Canis familiaris] Length = 1075 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCT 100 K A++ I+ + F L+ + Sbjct: 322 AKAGAVKDYIKMMLQNDSLKFLVFAHHLSMLQACTEAVIESKTRYIRIDGSVPSSERIHL 381 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ + + + G GL +VF L+WD + R + Sbjct: 382 VNQFQKDPDTRVAILSIQAAGQGLTFTA-ATYVVFAELYWDPGHI-----KQAEDRAHRI 435 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G +V ++YL+A T+D L+ L K+ + LN K++ Sbjct: 436 GQCSSVNIHYLVANGTLDTLMWGMLNRKTQVTGSTLNGRKEQL 478 >gi|324111110|gb|EGC05096.1| hypothetical protein ERIG_04245 [Escherichia fergusonii B253] Length = 2255 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 16/198 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----------KEVHDEKIKALEVIIE 64 +G+ I + ++ K ++ A+ + K K K + Sbjct: 1368 EGKQIIFTDEKTQHQKLKRIICNALNLEPSKVGILNAQTVAEAGKTGKKLKAVKPPKELS 1427 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 I Y+ L A +L ++ EG+ P++ + G+N Sbjct: 1428 DEPTDAQIAKYNEQMALYDAYIAQQNEMSLGGLEKIAADFQEGRTPIIICN-KKAEVGIN 1486 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + +L W Q R +A V V+Y + + DE L+ L Sbjct: 1487 LHRGTTDIHHLTLPWTPASIAQRNGRGARVGSNRAS----VRVHYYCGKGSFDEYRLKTL 1542 Query: 185 RTKSTIQDLLLNALKKET 202 + K+ +L + K E Sbjct: 1543 KRKAGWISDILRSDKSEM 1560 >gi|300361150|ref|ZP_07057327.1| SNF2 family helicase [Lactobacillus gasseri JV-V03] gi|300353769|gb|EFJ69640.1| SNF2 family helicase [Lactobacillus gasseri JV-V03] Length = 630 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 59/173 (34%), Gaps = 21/173 (12%) Query: 43 DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA----------FPQ 90 ++ + + K +IEK A ++V F + ++ Sbjct: 437 YKKYDLQHMESPKFILGINLIEKLVAQGKKVLVWGMFVGTMQKIADTLNEKGINTTLIYG 496 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 D I + G +L ++P + G ++L + V+F ++L Q +R Sbjct: 497 ATPKDDREKMIDNFRTGDAQVLVSNPNTLGESISLHQTVHDAVYFEYNFNLTFMLQSRDR 556 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQ------NTIDELVLQRLRTKSTIQDLLLNA 197 I + YYL+ + ID V ++L+ K + ++ Sbjct: 557 INRLG---LPQNQYTRYYYLMTKGDIAHMGFIDSTVYRKLKDKEKVMLDAIDG 606 >gi|238485918|ref|XP_002374197.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] gi|220699076|gb|EED55415.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] Length = 806 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 53/146 (36%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPAS 118 ++II N L + + ++ + E + +L Sbjct: 548 KIIIFYDNNNSAFWIAEGLELLGVDFRIYASTLKPKVRAAYLELFREQEDVRVLLMDLHQ 607 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + Q +E + R + G R VFV L+ + T+++ Sbjct: 608 ASHGLHI-ANASRVFIVNP-----IWQPNVESQAIKRAHRIGQTRPVFVETLVLKGTLED 661 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L+R + + + + +++ + Sbjct: 662 KMLER---RKAMSEKEMQQAERDLLD 684 >gi|188582343|ref|YP_001925788.1| helicase domain protein [Methylobacterium populi BJ001] gi|179345841|gb|ACB81253.1| helicase domain protein [Methylobacterium populi BJ001] Length = 922 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G K + + +L A+ G+NLQ+ IL F L W+ + +Q I R Sbjct: 551 GDHGAKVAAERRFRQKDGPRVLVCT-AAGREGINLQF-ARILFNFDLPWNPMDMEQRIGR 608 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 I + G VY L+ +TI+ + L K T + + ++ Sbjct: 609 I-----HRYGQSHTAQVYNLVLSDTIEGRIFLLLDEKLTEIARTVGKVDEQG 655 >gi|317153368|ref|YP_004121416.1| helicase domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943619|gb|ADU62670.1| helicase domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 966 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 73/207 (35%), Gaps = 33/207 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y +EL +L ++ A + + A E+ + I Sbjct: 437 ELYDMDGQELLDELLKSHVSALQSEGSHVETLL--------DAAVRCEQAGPDAKAEALI 488 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 + + + + N +++ F L++ +++ + Sbjct: 489 EWIYKLQAEENEPDMKVLIFTEFVPTQQMLKEFLEARGISVVTLNGSMAMEERGAAQDAF 548 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +L + G GLNLQ+ ++++ + + W+ +Q I R+ + G + Sbjct: 549 RKSH-RVLV-STDAGGEGLNLQF-AHVIINYDIPWNPMRLEQRIGRVD-----RIGQPKT 600 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQ 191 V + +++++ V + L K ++ Sbjct: 601 VQAINFVFEDSVEFRVREVLEQKLSVI 627 >gi|118396328|ref|XP_001030505.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila] gi|89284810|gb|EAR82842.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 908 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 78/201 (38%), Gaps = 12/201 (5%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + + + Q++ + E +S + +G E K++ + D +++ Sbjct: 171 QLFEQAQKQN--ESSNEEQNGSSSMFSALSLCYQLSGQAKLHELKNY--IKDLLENDIKI 226 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGR--TLDKDPCTIQEWNEGKIPLLFAHPASC 119 I+ + + +F + +L+ G+ ++ Q + ++ + + Sbjct: 227 IVFAHHNEMLNQLENFVQNELQLKFIRIDGKVAPKERHERVQQFQTDPQVKVAILSLLAA 286 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GL L NI+ F + W Q R + G + +V +Y++ + T+D+L Sbjct: 287 STGLTLTASSNIV-FAEMNWTPAIMQ-----QAEDRAHRIGQENSVLCHYILGEKTLDDL 340 Query: 180 VLQRLRTKSTIQDLLLNALKK 200 + +++ K I +L+ K Sbjct: 341 LYKKIEQKIAIVSNILDGESK 361 >gi|317144593|ref|XP_001820221.2| SNF2 family helicase [Aspergillus oryzae RIB40] Length = 1183 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 53/146 (36%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPAS 118 ++II N L + + ++ + E + +L Sbjct: 925 KIIIFYDNNNSAFWIAEGLELLGVDFRIYASTLKPKVRAAYLELFREQEDVRVLLMDLHQ 984 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + Q +E + R + G R VFV L+ + T+++ Sbjct: 985 ASHGLHI-ANASRVFIVNP-----IWQPNVESQAIKRAHRIGQTRPVFVETLVLKGTLED 1038 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L+R + + + + +++ + Sbjct: 1039 KMLER---RKAMSEKEMQQAERDLLD 1061 >gi|290984663|ref|XP_002675046.1| helicase [Naegleria gruberi] gi|284088640|gb|EFC42302.1| helicase [Naegleria gruberi] Length = 960 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Query: 98 PCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N PLL G++L I+++ W + V R Sbjct: 743 QSVVDSFNSSNDAPLLLISTKVGSLGIDLSTSQKIVLYDVCWDS------SWDNQAVFRS 796 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G + V +Y + NTI+ + ++L TK++ L+ KK+ ++ Sbjct: 797 FRYGQTKPVSIYRFVMYNTIESKIFEKLCTKTSPFKN-LSEDKKDFLN 843 >gi|328875547|gb|EGG23911.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1107 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 10/152 (6%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 K EV D K ++ + ++ S + + Sbjct: 663 KDKLEVFDGKFIIFAHHLDVLDGISNVL----KSRNCEYIRIDGNTNVQTRADYVNLFQT 718 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + I + GL L N+++F L+W R + G +V Sbjct: 719 DDTIRAAVLSLTAASTGLTLTA-ANLVIFAELYWTPGTLF-----QAEDRAHRYGQTSSV 772 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + YL+ ++DE + + K + +L+ Sbjct: 773 LIQYLVGIGSVDESIWNMIEEKKDVLGRVLDG 804 >gi|47213496|emb|CAF91072.1| unnamed protein product [Tetraodon nigroviridis] Length = 2422 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 61/162 (37%), Gaps = 18/162 (11%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 L+ ++ + + + + K++AL +++ K ++ +++ L L+ Sbjct: 1338 HLLSRHFFHFPDLQQMQ-MDSGKLEALAILLRKLKSDGRRVLIFTQMVKMLDILEAFLDH 1396 Query: 91 ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 T ++ ++Q++N + C + + ++F+ + Sbjct: 1397 RKLSYVRVDESFTPEERQESMQKFNRDRKVFCSMLTNRCCSTFGTVFDADTIIFYDTDLN 1456 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + E + G + + +Y L + N+I+E +L+ Sbjct: 1457 PSMDVRTQE-----WCDKIGRSKDIHIYRLESGNSIEEKLLK 1493 >gi|221506326|gb|EEE31961.1| helicase, putative [Toxoplasma gondii VEG] Length = 2744 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 12/138 (8%) Query: 57 KALEVIIEKANAAPIIVAYHF--NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 + ++I+ + + + F + ++ + + +L Sbjct: 2531 RCPKIIVASSLWENLFLLGCFLEKHSVKCCHFYEKMQDKTNRVEALKSFQQDTETMVLLL 2590 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM---IER------IGVTRQRQAGFKRAV 165 HGL+L + ++ D QQ+ + R ++R + G R V Sbjct: 2591 STQLGAHGLDL-SCASHVLLPDPPTDPNVEQQVSRDVYRLLFLHLQVISRAHRMGALRDV 2649 Query: 166 FVYYLIAQNTIDELVLQR 183 V I ++T++E +LQR Sbjct: 2650 HVEIFILKDTVEETILQR 2667 >gi|221485471|gb|EEE23752.1| helicase, putative [Toxoplasma gondii GT1] Length = 2763 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 12/138 (8%) Query: 57 KALEVIIEKANAAPIIVAYHF--NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 + ++I+ + + + F + ++ + + +L Sbjct: 2550 RCPKIIVASSLWENLFLLGCFLEKHSVKCCHFYEKMQDKTNRVEALKSFQQDTETMVLLL 2609 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM---IER------IGVTRQRQAGFKRAV 165 HGL+L + ++ D QQ+ + R ++R + G R V Sbjct: 2610 STQLGAHGLDL-SCASHVLLPDPPTDPNVEQQVSRDVYRLLFLHLQVISRAHRMGALRDV 2668 Query: 166 FVYYLIAQNTIDELVLQR 183 V I ++T++E +LQR Sbjct: 2669 HVEIFILKDTVEETILQR 2686 >gi|237835405|ref|XP_002367000.1| helicase conserved C-terminal domain-containing protein [Toxoplasma gondii ME49] gi|211964664|gb|EEA99859.1| helicase conserved C-terminal domain-containing protein [Toxoplasma gondii ME49] Length = 2744 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 12/138 (8%) Query: 57 KALEVIIEKANAAPIIVAYHF--NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 + ++I+ + + + F + ++ + + +L Sbjct: 2531 RCPKIIVASSLWENLFLLGCFLEKHSVKCCHFYEKMQDKTNRVEALKSFQQDTETMVLLL 2590 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM---IER------IGVTRQRQAGFKRAV 165 HGL+L + ++ D QQ+ + R ++R + G R V Sbjct: 2591 STQLGAHGLDL-SCASHVLLPDPPTDPNVEQQVSRDVYRLLFLHLQVISRAHRMGALRDV 2649 Query: 166 FVYYLIAQNTIDELVLQR 183 V I ++T++E +LQR Sbjct: 2650 HVEIFILKDTVEETILQR 2667 >gi|115374698|ref|ZP_01461975.1| helicase [Stigmatella aurantiaca DW4/3-1] gi|115368269|gb|EAU67227.1| helicase [Stigmatella aurantiaca DW4/3-1] Length = 937 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 9/106 (8%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ ++++ + + GLNLQ+ N++V + L W+ + +Q I R Sbjct: 506 TPEERRALVEDFRHRMQ--ILICTEAGAEGLNLQF-CNLVVNYDLPWNPQRVEQRIGRC- 561 Query: 153 VTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G +R V V + + N D + + L K + D + A Sbjct: 562 ----HRYGQQRDVLVINFLNRQNAADARLFELLEKKLNLFDGVFGA 603 >gi|293379341|ref|ZP_06625486.1| SNF2 family N-terminal domain protein [Enterococcus faecium PC4.1] gi|292642033|gb|EFF60198.1| SNF2 family N-terminal domain protein [Enterococcus faecium PC4.1] Length = 483 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 65/171 (38%), Gaps = 25/171 (14%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCT 100 K KA +I+K + IV F +L + ++D+ Sbjct: 303 SSKTKATIELIKKLVSENKKTIVWCIFISSIELLENKCEELGLSAISIYGETSMDERLKL 362 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+E+ +G+ +L +P + ++L + +++ ++L Q +RI Sbjct: 363 IKEFQKGQYDILITNPHTLAESVSLHQVCHDAIYYEYSFNLVHLLQSKDRIHRLG---LA 419 Query: 161 FKRAVFVYYLIAQN-------TIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + YY+ ++ ++D+ + RL K I L+A+ + + Sbjct: 420 DNQYTQYYYMQSKYIYNEQVYSLDDRIYHRLMEKEKIM---LDAIDHDILE 467 >gi|118390229|ref|XP_001028105.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89309875|gb|EAS07863.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 1895 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 71/235 (30%), Gaps = 61/235 (25%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------------DEEKHWKEVHD 53 + + + D + + +Q+ N Y +++ + Sbjct: 1610 KTKGFEDADQGSKIQESVLRMLSHMIQIVNHPCQYKKQERLKGNAGGLEMQKELSQYSAS 1669 Query: 54 EKIKALEVIIEK------------------ANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 K AL+ ++ N +++ F L + Sbjct: 1670 GKFVALKQLLVDLGFEEKESIEAEEQKVLTTNKNKVLIFSRFKETLQLICDQLLNTEFSH 1729 Query: 96 -------------KDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 K I ++N + + ++ + G GLNL N+++ F ++ Sbjct: 1730 IKYLKLDGNVQVSKRYAIINKFNEDSECKIMLLTTSVGGLGLNLTS-ANVVIMFDHNYNP 1788 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q I+R +I ++T++E ++ R K I + ++N Sbjct: 1789 MNDLQAIDRAHRIG--------------MITKDTLEERIMGIQRFKINIANAIIN 1829 >gi|82596817|ref|XP_726418.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23481821|gb|EAA17983.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 875 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 6/139 (4%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 ++ + + F + +DK I+ + + KI + +CG Sbjct: 596 LLFCHHKLVMDEIDEFLKEKKLGFIRVDGLTPIDKREIYIKNFQSDEKIRIALLSITACG 655 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL N +VF L+W + Q +R V ++YL+AQNTIDE+V Sbjct: 656 VGLNLTA-ANTVVFGELYWVPGQMIQAEDRAHRIGTTHD----TVNIHYLVAQNTIDEVV 710 Query: 181 LQRLRTKSTIQDLLLNALK 199 + + K LN + Sbjct: 711 WKIINRKWNTLTTALNGTE 729 >gi|257879433|ref|ZP_05659086.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|323142564|ref|ZP_08077380.1| helicase C-terminal domain protein [Phascolarctobacterium sp. YIT 12067] gi|257813661|gb|EEV42419.1| conserved hypothetical protein [Enterococcus faecium 1,230,933] gi|322412997|gb|EFY03900.1| helicase C-terminal domain protein [Phascolarctobacterium sp. YIT 12067] Length = 2776 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G++ +L G G N+Q + + W + Q Sbjct: 2395 FIHDADTEAKKKDLFAKVRTGQVRVLLGSTQKMGAGTNVQDKLVAVHHLDVGWRPSDMTQ 2454 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V VY + + T D + Q L K ++ + Sbjct: 2455 RNGRIIR----QGNRNKEVQVYQYVTEGTFDAYLYQTLENKQKFISQIMTS 2501 >gi|310822711|ref|YP_003955069.1| Helicase/SNF2 domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|309395783|gb|ADO73242.1| Helicase/SNF2 domain protein [Stigmatella aurantiaca DW4/3-1] Length = 926 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 9/106 (8%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ ++++ + + GLNLQ+ N++V + L W+ + +Q I R Sbjct: 495 TPEERRALVEDFRHRMQ--ILICTEAGAEGLNLQF-CNLVVNYDLPWNPQRVEQRIGRC- 550 Query: 153 VTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G +R V V + + N D + + L K + D + A Sbjct: 551 ----HRYGQQRDVLVINFLNRQNAADARLFELLEKKLNLFDGVFGA 592 >gi|256763533|ref|ZP_05504113.1| predicted protein [Enterococcus faecalis T3] gi|307274366|ref|ZP_07555554.1| protein, SNF2 family [Enterococcus faecalis TX0855] gi|307287486|ref|ZP_07567534.1| protein, SNF2 family [Enterococcus faecalis TX0109] gi|256684784|gb|EEU24479.1| predicted protein [Enterococcus faecalis T3] gi|306501494|gb|EFM70795.1| protein, SNF2 family [Enterococcus faecalis TX0109] gi|306508959|gb|EFM78041.1| protein, SNF2 family [Enterococcus faecalis TX0855] Length = 620 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 67/168 (39%), Gaps = 22/168 (13%) Query: 48 WKEVHDEKIKALEVIIEKANA--APIIVAYHFNSDLARLQKAFPQG----------RTLD 95 K K+ +I+K + +IV F S + L+K + LD Sbjct: 435 NKIDSTSKMNTTMQLIQKLSGEHKKVIVWCIFISSIQLLEKKCQESGLKVVTIYGETPLD 494 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 K I+E+ +G +L +P + ++L + + +++ ++L Q +RI Sbjct: 495 KRLQLIEEYQQGYYDVLITNPHTLAESVSLHHFCHDAIYYEYSYNLVHLLQSKDRIHRLG 554 Query: 156 QRQAGFKRAVFVYYL----IAQN---TIDELVLQRLRTKSTIQDLLLN 196 + + + YY+ I + ++D + +RL+ K + +N Sbjct: 555 LKDGQYTQ---YYYMESQYIYNDKIFSLDNRIYERLKEKEEVMLNAIN 599 >gi|99035905|ref|ZP_01314954.1| hypothetical protein Wendoof_01000200 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 845 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 41/152 (26%), Gaps = 17/152 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K ++ Q+ N + ++K K++ LE Sbjct: 695 LYQKVVDTTMEKIEKSEGIERKGLIFKLINALKQICNHPSQFGKKKRASIEQSGKMQMLE 754 Query: 61 VIIEKANA--APIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPCTIQEWNE- 106 I+ ++ + G + I ++ Sbjct: 755 EILISIGEVAEKSLIFTQYTEMGEIIARLLEERFESEVPFLHGGLSRKARDTMINDFQNL 814 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + +L + G GLNL N ++ + LW Sbjct: 815 FQSNILIVSLKAGGTGLNLTA-ANHVIHYDLW 845 >gi|294783586|ref|ZP_06748910.1| type III restriction enzyme, res subunit superfamily [Fusobacterium sp. 1_1_41FAA] gi|294480464|gb|EFG28241.1| type III restriction enzyme, res subunit superfamily [Fusobacterium sp. 1_1_41FAA] Length = 400 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 10/146 (6%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI--- 109 +K++ L+ A I++ Y+FN + ++K + I ++++ Sbjct: 250 KDKLEYLKEF-RANTDANILIFYNFNREAKEIKKIMKVDYEVSGAVSNIPKFDDYDTLKG 308 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+ LQY ++FFS W +++ + R + G K V VY Sbjct: 309 KTTLVQIQAGGAGIELQYN-TEVIFFSPTWSYQDYS-----QALGRAYRIGQKNKVTVYK 362 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL 195 I TI+E V RL K + LL Sbjct: 363 YIGNRTIEECVYARLDEKKDFAEKLL 388 >gi|66812496|ref|XP_640427.1| DEAD-box RNA helicase [Dictyostelium discoideum AX4] gi|60468391|gb|EAL66396.1| DEAD-box RNA helicase [Dictyostelium discoideum AX4] Length = 1540 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 47/155 (30%), Gaps = 26/155 (16%) Query: 67 NAAPIIVAYHFNSDLARLQ--------------KAFPQGRTLDKDPCTIQEWN------E 106 N IV H+ L ++ + K I + Sbjct: 1332 NQLKGIVFSHWTMFLDLIEESLIANDWIKDVDFCRIDGKLPISKREAIIDSFQAKSNNGN 1391 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G L+ G GLNL NI+ W IE + R + G R +F Sbjct: 1392 GGPRLMLMSITCGGIGLNL-ERANIVYLMEPSWTPS-----IEEQAIGRVDRIGQTRDIF 1445 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 V I + TI+ +L+ K + L + E Sbjct: 1446 VKRFIIKKTIEVGMLKLHDAKKNNSNAFLTDDEIE 1480 >gi|296446699|ref|ZP_06888639.1| helicase domain protein [Methylosinus trichosporium OB3b] gi|296255820|gb|EFH02907.1| helicase domain protein [Methylosinus trichosporium OB3b] Length = 1048 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 74/202 (36%), Gaps = 18/202 (8%) Query: 6 KFQRELYCDLQGENIEAF-NSASKT---VKCLQLANGAVYYDEEKHWKEV----HDEKIK 57 + +R + + + I+A + ++ K QL + + + + + + + + Sbjct: 720 EAERRVLAAEEVDTIDAIVGAIARLPTDTKARQLVDEIRDLEAAGYRQVIVFTQYTDTMD 779 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 L + A ++ +A G + +G +L Sbjct: 780 YLRDHLFDATGKVVMCFSG----RGGEIRAHDGGWKQISREEVKARFKKGAADVLVCT-D 834 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLN Q+ G ++ + + W+ +Q I RI Q + + L ++T++ Sbjct: 835 AAAEGLNFQFCGALIN-YDMPWNPMRVEQRIGRIDRLGQS----FADIRITNLHYRDTVE 889 Query: 178 ELVLQRLRTKSTIQDLLLNALK 199 V Q L+ + ++ ++ L+ Sbjct: 890 ADVYQALQQRISVFTNVVGGLQ 911 >gi|22537429|ref|NP_688280.1| SNF2 family protein [Streptococcus agalactiae 2603V/R] gi|22534305|gb|AAN00153.1|AE014250_16 SNF2 family protein [Streptococcus agalactiae 2603V/R] Length = 2274 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + + W + Q Sbjct: 1902 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHYLDVPWRPSDIVQ 1961 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 1962 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 2008 >gi|322699210|gb|EFY90974.1| SNF2 family helicase [Metarhizium acridum CQMa 102] Length = 1144 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 54/155 (34%), Gaps = 11/155 (7%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEV--IIEKANAAPIIVAYHFNSDLARLQKAFP 89 Q V K + + II N L + Sbjct: 859 LRQ--THLVSTVSSKLSYLIDSIVRHQDDDKIIIFYENENVAWYLASVLDMLQIQHLIYA 916 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + T ++ + ++ +L + GL++ + + F + + + + Sbjct: 917 KTLTTERKAQYVNTFHHNPVFRVLLMDLSQAAFGLDM-REASRVYFINPVLNPQ-----V 970 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 E + R R+ ++ VFV L+ +++IDE++L+R Sbjct: 971 EAQAIGRVRRISQQKPVFVETLVLKDSIDEVILER 1005 >gi|238597268|ref|XP_002394280.1| hypothetical protein MPER_05857 [Moniliophthora perniciosa FA553] gi|215463060|gb|EEB95210.1| hypothetical protein MPER_05857 [Moniliophthora perniciosa FA553] Length = 235 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 5/79 (6%) Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + ++ F W+ + + R + G K V VY ++++T++E VL+R + Sbjct: 24 KPADTVIIFDSDWNP-----HNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLERAKK 78 Query: 187 KSTIQDLLLNALKKETIHV 205 K ++ ++N + H+ Sbjct: 79 KMVLEYAIINQMDTSQAHL 97 >gi|329734512|gb|EGG70824.1| helicase C-terminal domain protein [Staphylococcus epidermidis VCU028] Length = 624 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 28/183 (15%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA--- 87 Q+ N K V K + +IE + ++V F + ++ K Sbjct: 431 QQIYNSF-------DLKNVTSPKFEKGIELIENLVSQGKKVLVWGLFVGTMNKINKRLLE 483 Query: 88 -------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + I + G +L ++P + G ++L + ++F ++ Sbjct: 484 SDINSILIYGETPKEDRVDMINNFRNGNAQVLISNPNTLGESISLHQTVHDAIYFEYNFN 543 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLL 194 L Q +RI + R YYL++ + ID+ V RL+ K + Sbjct: 544 LTFMLQSRDRIHRLGLNNNQYTR---YYYLMSEGDRAHKGFIDKAVYNRLKEKEDVMLNA 600 Query: 195 LNA 197 ++ Sbjct: 601 IDG 603 >gi|255087256|ref|XP_002505551.1| SNF2 super family [Micromonas sp. RCC299] gi|226520821|gb|ACO66809.1| SNF2 super family [Micromonas sp. RCC299] Length = 700 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 17/149 (11%) Query: 68 AAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHP 116 + H L + +Q++ I + Sbjct: 473 GDKFLFFAHHKELLDAASTVLRKRKTQFIRIDGTTPTTERGGLVQQFQTVDAIKVAVLSI 532 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GL L + +VF L W + R + G +V V +L A+N++ Sbjct: 533 KAAGMGLTLTA-ASTVVFGELSWTPGDIV-----QAEDRAHRIGQASSVLVQFLHAKNSV 586 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETIHV 205 D+++ ++ K +L+ + + + Sbjct: 587 DDVMWGSVQNKLENLGQVLDGHMGDHLEI 615 >gi|171742817|ref|ZP_02918624.1| hypothetical protein BIFDEN_01932 [Bifidobacterium dentium ATCC 27678] gi|283456138|ref|YP_003360702.1| ATP-dependent DNA helicase recQ [Bifidobacterium dentium Bd1] gi|171278431|gb|EDT46092.1| hypothetical protein BIFDEN_01932 [Bifidobacterium dentium ATCC 27678] gi|283102772|gb|ADB09878.1| ATP-dependent DNA helicase recQ [Bifidobacterium dentium Bd1] Length = 1185 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 8/106 (7%) Query: 89 PQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + + + N +L A A+ GLNLQ +++V + L W+ +Q Sbjct: 560 HGGMDRAERKRVQERFVNNPATRILVATDAAG-EGLNLQR-ADLMVNYDLPWNPNRIEQR 617 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI + G KR +++ L+A++T + V +L TK D Sbjct: 618 FGRI-----HRIGQKRVCWLWNLVAKDTREGEVYGKLLTKIETMDK 658 >gi|163731714|ref|ZP_02139161.1| hypothetical protein RLO149_20459 [Roseobacter litoralis Och 149] gi|161395168|gb|EDQ19490.1| hypothetical protein RLO149_20459 [Roseobacter litoralis Och 149] Length = 915 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 66/220 (30%), Gaps = 32/220 (14%) Query: 3 QY-HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALE 60 Y + + +++ + E V + A+ Sbjct: 584 MYPRQMPPAQAIRYDEARAKHGGILQVLQHIRRVSAHPGMIEGELINDFVGASARTSAVM 643 Query: 61 VIIE--KANAAPIIVA-------YHFNSDLARL----QKAFPQGRTLDKDPCTIQEWN-- 105 I+ K+ +V F L ++D +++ Sbjct: 644 DILRFVKSKGERALVFVENRDIQAWFIEILNLEFGLNVMLINGDTSIDDRQWITKQFQRE 703 Query: 106 ---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + +L P + G GL L N ++ + WW+ +Q +R + G Sbjct: 704 RGDDNEFDVLVLGPRAAGTGLTLTA-ANHVIHLTRWWNPAVEEQCNDR-----THRIGQT 757 Query: 163 RAVFVYYLIAQN------TIDELVLQRLRTKSTIQDLLLN 196 R V V+ +A + + D L+ + + K + +L Sbjct: 758 RPVTVHLPMAVHPELGPASFDCLLHRLISRKMGLASNVLQ 797 >gi|118103418|ref|XP_424694.2| PREDICTED: similar to chromodomain helicase DNA binding protein 1 [Gallus gallus] Length = 1260 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 25/222 (11%), Positives = 66/222 (29%), Gaps = 29/222 (13%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE----- 54 KQY+K R +G + ++ + N + + + Sbjct: 398 KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQH 457 Query: 55 --------KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 + +I + +++ L L + + + Sbjct: 458 LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL 517 Query: 98 -PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + N+ + + + +W+ I R Sbjct: 518 RKQALDHFNAEGSE--DXSFNIHXNRTNVCIXISSIDIIAFFWNPCSCIVYIF--VSLRX 573 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R+ AV +Y L+ + +++E +L+R + K + L++ + Sbjct: 574 RRIQTLCAVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 615 >gi|83768080|dbj|BAE58219.1| unnamed protein product [Aspergillus oryzae] Length = 1021 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 53/146 (36%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPAS 118 ++II N L + + ++ + E + +L Sbjct: 763 KIIIFYDNNNSAFWIAEGLELLGVDFRIYASTLKPKVRAAYLELFREQEDVRVLLMDLHQ 822 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + Q +E + R + G R VFV L+ + T+++ Sbjct: 823 ASHGLHI-ANASRVFIVNP-----IWQPNVESQAIKRAHRIGQTRPVFVETLVLKGTLED 876 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L+R + + + + +++ + Sbjct: 877 KMLER---RKAMSEKEMQQAERDLLD 899 >gi|222637735|gb|EEE67867.1| hypothetical protein OsJ_25679 [Oryza sativa Japonica Group] Length = 1390 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N GK +L A +C G++L G + LV W+ + R + Sbjct: 1255 RSDVMDKFNGDSAGKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKT-----RQAI 1308 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G +R V+VY L+A T +E R K+ + ++ Sbjct: 1309 ARAFRRGQERTVYVYLLVASGTWEEEKYNSNRRKAWMSKMVF 1350 >gi|195492235|ref|XP_002093904.1| GE21549 [Drosophila yakuba] gi|194180005|gb|EDW93616.1| GE21549 [Drosophila yakuba] Length = 1272 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 61/169 (36%), Gaps = 20/169 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ + I II+ + + L + +A ++ CT +++ Sbjct: 1102 GDFSTKISSVVELVLKIKGDNEQEKIIIFSQWQAILIEIARALSLNGIHFRNKCTNKDFE 1161 Query: 106 E-----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + L + GLNL + + + ER + R + G Sbjct: 1162 DFKNPFSNVTCLLMPLSKGSKGLNL-IEATHVFLVEPILNPGD-----ERQAIGRIHRFG 1215 Query: 161 FKRAVFVYYLIAQNTIDELVLQR---------LRTKSTIQDLLLNALKK 200 K+ V+ I T++E +L L T ++++ L++LKK Sbjct: 1216 QKKPTKVHRFIVNGTVEENILSLITSADDTTTLSTHWDLENMTLDSLKK 1264 >gi|163796533|ref|ZP_02190492.1| superfamily II DNA/RNA helicase, SNF2 family protein [alpha proteobacterium BAL199] gi|159178093|gb|EDP62638.1| superfamily II DNA/RNA helicase, SNF2 family protein [alpha proteobacterium BAL199] Length = 1198 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 8/112 (7%) Query: 87 AFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G ++ + + + ++ +L A A+ G+NLQ +++V + L W+ + Sbjct: 564 MIHGGMGREERMKAQEAFKHDPEVQVLLATDAAG-EGINLQR-AHLMVNYDLPWNPNRLE 621 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q RI + G ++ L+A+ T + V ++L K L Sbjct: 622 QRFGRI-----HRIGQTEVCHLWNLVAEETREGDVYRKLLEKLEQARKALGG 668 >gi|289615990|emb|CBI57341.1| unnamed protein product [Sordaria macrospora] Length = 1811 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 7/97 (7%) Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + K I+++N + + + + G GLN+ G N +V F + E Q Sbjct: 1380 STPVGKRQAAIKDFNTDNSLDVYLISTKAGGVGLNI-PGANRVVLFDFGFTPAEEQ---- 1434 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 V R + G K+ VFVY+L T + + + Sbjct: 1435 -QAVGRAYRIGQKKDVFVYHLKVGGTYETAIHNVAKK 1470 >gi|53803233|ref|YP_115086.1| prophage LambdaMc01, SNF2 family helicase [Methylococcus capsulatus str. Bath] gi|53756994|gb|AAU91285.1| prophage LambdaMc01, helicase, SNF2 family [Methylococcus capsulatus str. Bath] Length = 925 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G K + + +L A+ G+NLQ+ IL F L W+ + +Q I R Sbjct: 553 GDHGAKVAAERRFRQKDGPRVLVCT-AAGREGINLQF-ARILFNFDLPWNPMDVEQRIGR 610 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 I + G VY L+ +TI+ + L K T + + + Sbjct: 611 I-----HRYGQNHTAQVYNLVLSDTIEGRIFLLLDEKLTEIARTVGKVDDQG 657 >gi|253755095|ref|YP_003028235.1| hypothetical protein SSUBM407_0473 [Streptococcus suis BM407] gi|251817559|emb|CAZ55306.1| hypothetical protein SSUBM407_0473 [Streptococcus suis BM407] Length = 2281 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1909 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1968 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 1969 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 2015 >gi|117926000|ref|YP_866617.1| helicase domain-containing protein [Magnetococcus sp. MC-1] gi|117609756|gb|ABK45211.1| helicase domain protein [Magnetococcus sp. MC-1] Length = 1170 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 69/201 (34%), Gaps = 26/201 (12%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 + +L+ IE K V+ +++ W+E+ + E+ + Sbjct: 456 QTIQELE-AEIETLRLLEMQAKL------VVHSGKDRKWEELSSLLQEKPEMFSASGHRR 508 Query: 70 PIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 +I+ L L++ G D +E+ L+ Sbjct: 509 KMIIFTEHKDTLNYLRERIGSLLGAPGAVVVIHGGVNRDDRRKIQEEFRNNPDVLILLAT 568 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+NLQ N++V + L W+ +Q RI + G ++ ++A T Sbjct: 569 DAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWNIVAHGTR 622 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 + V +L K I+ L Sbjct: 623 EGEVFTKLLEKLEIERAALGG 643 >gi|296808231|ref|XP_002844454.1| conserved hypothetical protein [Arthroderma otae CBS 113480] gi|238843937|gb|EEQ33599.1| conserved hypothetical protein [Arthroderma otae CBS 113480] Length = 1172 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 55/146 (37%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPAS 118 ++II + L + + + + +NEG+ + +L Sbjct: 891 KIIIFYESENTAFWIAEGLELLGTDFRIYASTLKPSQKSEYLSVFNEGESVRVLLMDLRQ 950 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + WD IE + R + R V+V L+ + T++E Sbjct: 951 AAHGLHI-AAASRVYIVNPIWDP-----NIESQAIKRAHRISQSRPVYVETLVLKGTLEE 1004 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L+R + + + +K+ + Sbjct: 1005 KMLKR---RKQMSSTEMQHAEKDMLD 1027 >gi|254283195|ref|ZP_04958163.1| Type III restriction enzyme, res subunit family [gamma proteobacterium NOR51-B] gi|219679398|gb|EED35747.1| Type III restriction enzyme, res subunit family [gamma proteobacterium NOR51-B] Length = 1184 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 74/217 (34%), Gaps = 31/217 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSA-------SKTVKCLQL---ANGAVYYDEEKHWKEVHDE 54 + E Y + ++ +A ++ + L A G V +K W+E+ Sbjct: 442 EELSAEEYELYADQVVDQATAAETIPELEAEILILKDLEHQALGVVQSGNDKKWEELSHL 501 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG--------------RTLDKDPCT 100 E+ E + +I+ L L D+ Sbjct: 502 LQDRPEMYTESGSRRKLIIFTEHKDTLNYLVGRIRGMLGNPEAVITIHGGVNRDDRRKAQ 561 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N + +L A A+ G+NLQ N++V + L W+ +Q RI + G Sbjct: 562 EEFRNNRDVQVLVATDAAG-EGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIG 614 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ LIA T + V QRL K I+ L Sbjct: 615 QTEVCHLWNLIASETREGEVFQRLFDKIEIEKQALGG 651 >gi|313681099|ref|YP_004058838.1| helicase domain protein [Oceanithermus profundus DSM 14977] gi|313153814|gb|ADR37665.1| helicase domain protein [Oceanithermus profundus DSM 14977] Length = 1133 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 64/185 (34%), Gaps = 25/185 (13%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 + + +LA + +++ W+E+ ++ E I +++ L L+ Sbjct: 455 IASLERLEKLARRVLQAGQDRKWQEL--ARLMGTEEI----KGRKLVIFTEHRDTLDYLR 508 Query: 86 KAFPQ-------------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 G ++ E+ K L+ + G G+NLQ ++L Sbjct: 509 NRLHTFLGNEDALVTIHGGMRREERHHAQAEFTNNKDVLVLLATDAAGEGINLQQ-AHLL 567 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + + W+ +Q RI + G ++ L+A+ T + V L K Sbjct: 568 INYDIPWNPNRLEQRFGRI-----HRIGQTEVCHMWNLVARGTREGDVFALLLKKLEAAA 622 Query: 193 LLLNA 197 L Sbjct: 623 DALGG 627 >gi|209543188|ref|YP_002275417.1| helicase domain-containing protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530865|gb|ACI50802.1| helicase domain protein [Gluconacetobacter diazotrophicus PAl 5] Length = 1160 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 7/110 (6%) Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G T + + +N + + ++ A+ + G G+NLQ G +++V + L W+ +Q Sbjct: 533 HGGITREARRAAVAAFNSDPAVRVMIAN-DAAGEGVNLQRGAHLMVNYDLPWNPNRIEQR 591 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L A NT + V QRL K L Sbjct: 592 FGRI-----HRIGQTEICHLWNLCAVNTREGEVYQRLLDKLEEARAALGG 636 >gi|19552849|ref|NP_600851.1| helicase [Corynebacterium glutamicum ATCC 13032] gi|62390520|ref|YP_225922.1| SNF2 family DNA/RNA helicase [Corynebacterium glutamicum ATCC 13032] gi|21324406|dbj|BAB99030.1| Superfamily II DNA/RNA helicases, SNF2 family [Corynebacterium glutamicum ATCC 13032] gi|41325857|emb|CAF21646.1| Superfamily II DNA/RNA helicase, SNF2 family [Corynebacterium glutamicum ATCC 13032] Length = 892 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 17/166 (10%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHF--------NSDLARLQKA 87 G + K++ + + E+ + ++ +F R+ Sbjct: 683 GMRRSAMLSPTPRLTSAKMQRILELFEEAEEHGRKALIFTYFLDVLDELEKHLGERVIGR 742 Query: 88 FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 K + + L A + G GLN+Q ++ + Q Sbjct: 743 ISGDVPATKRQLLVDALSHSKPGSALIAQITAGGVGLNIQS-ASLCIICEPQVKPTIEQ- 800 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V R + G V V+ LI T DE +L+ L K+ + D Sbjct: 801 ----QAVARVHRMGQTATVQVHRLIGDETADERMLEILAGKTHVFD 842 >gi|145498258|ref|XP_001435117.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124402246|emb|CAK67720.1| unnamed protein product [Paramecium tetraurelia] Length = 1210 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 5/110 (4%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 +++K I+++ E + + N + WW+ IE Sbjct: 1092 MSVEKREKVIKQFKESQDAIALLLSLRATSTGLNLTMANNVFLVDPWWNPA-----IEDQ 1146 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G + V V + +NTI++ + + K + K+ Sbjct: 1147 AIGRADRIGQQNQVKVVRFLCRNTIEQSINLLHQKKKFQIKRTFSGEAKK 1196 >gi|76797967|ref|ZP_00780227.1| SNF2 family protein [Streptococcus agalactiae 18RS21] gi|76586691|gb|EAO63189.1| SNF2 family protein [Streptococcus agalactiae 18RS21] Length = 2271 Score = 59.8 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1902 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1961 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 1962 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 2008 >gi|323127133|gb|ADX24430.1| SNF2 family protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 2274 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1902 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1961 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 1962 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 2008 >gi|289618249|emb|CBI54973.1| unnamed protein product [Sordaria macrospora] Length = 273 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 45/146 (30%), Gaps = 20/146 (13%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + K +++ A + F + L + + + + Sbjct: 127 LSRAKWALDDIVSGNDKGALKLYNVLFTATLKMRMMKAAKIFSSAQTAAVL--------F 178 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + AHP + + + W+ +E + R + G + V V Sbjct: 179 VPIAHPLN-------LTAASHVHVVEPHWNPS-----VEAQAIARAIRMGQMKNVIVTRY 226 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 I + T++E ++ K T+ L + Sbjct: 227 IMKGTVEESIVALQTKKQTLAKLTFD 252 >gi|171692877|ref|XP_001911363.1| hypothetical protein [Podospora anserina S mat+] gi|170946387|emb|CAP73188.1| unnamed protein product [Podospora anserina S mat+] Length = 1523 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 23/168 (13%) Query: 31 KCLQL------ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR- 83 K Q+ ++G Y + D ++ L + A I+ + L Sbjct: 1251 KLSQIKSIDLPSSGPSYTTKV-------DTLLRHLLWLRSSDPGAKSIIFSQYKEFLEVL 1303 Query: 84 ---LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ + DK T ++ + + + GLNL + + + Sbjct: 1304 ALAFKRYHIGYTSFDKPNGTTSFKSDPSVEVFLLSARAHSSGLNLVN-ASHVFICEPMLN 1362 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 Q I R+ + G ++ V+ + + T++E + K Sbjct: 1363 TALELQAIARVD-----RIGQEQETTVWLYLVEGTVEEGIYDLSVRKR 1405 >gi|157419748|gb|ABV55437.1| SNF2-related helicase [Streptococcus dysgalactiae subsp. equisimilis] Length = 2278 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1906 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1965 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 1966 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 2012 >gi|77164180|ref|YP_342705.1| DEAD/DEAH family helicase [Nitrosococcus oceani ATCC 19707] gi|254436075|ref|ZP_05049582.1| Helicase conserved C-terminal domain protein [Nitrosococcus oceani AFC27] gi|76882494|gb|ABA57175.1| helicase, DEAD/DEAH box family [Nitrosococcus oceani ATCC 19707] gi|207089186|gb|EDZ66458.1| Helicase conserved C-terminal domain protein [Nitrosococcus oceani AFC27] Length = 760 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 74/217 (34%), Gaps = 31/217 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSA-------SKTVKCLQL---ANGAVYYDEEKHWKEVHDE 54 + E Y + ++ +A ++ + L A G V +K W+E+ Sbjct: 18 EELSAEEYELYADQVVDQATAAETIPELEAEILILKDLEHQALGVVQSGNDKKWEELSHL 77 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG--------------RTLDKDPCT 100 E+ E + +I+ L L D+ Sbjct: 78 LQDRPEMYTESGSRRKLIIFTEHKDTLNYLVGRIRGMLGNPEAVITIHGGVNRDDRRKAQ 137 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + N + +L A A+ G+NLQ N++V + L W+ +Q RI + G Sbjct: 138 EEFRNNRDVQVLVATDAAG-EGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIG 190 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ LIA T + V QRL K I+ L Sbjct: 191 QTEVCHLWNLIASETREGEVFQRLFDKIEIEKKALGG 227 >gi|223932202|ref|ZP_03624206.1| SNF2-related protein [Streptococcus suis 89/1591] gi|223899183|gb|EEF65540.1| SNF2-related protein [Streptococcus suis 89/1591] Length = 2274 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1902 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1961 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 1962 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 2008 >gi|295102472|emb|CBL00017.1| DNA methylase [Faecalibacterium prausnitzii L2-6] Length = 1989 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + GK+ +L A G G N+Q + + W + Q Sbjct: 1601 FIHNADTEGKKADLFSKVRSGKVRVLLGSTAKMGAGTNVQTLLVAVHHLDVGWRPSDMTQ 1660 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V+VY + + T D + Q L K ++ + Sbjct: 1661 RNGRIIR----QGNKNKQVYVYNYVTEGTFDAYLWQTLENKQKFISQIMTS 1707 >gi|46138107|ref|XP_390744.1| hypothetical protein FG10568.1 [Gibberella zeae PH-1] Length = 786 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 49/147 (33%), Gaps = 22/147 (14%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-----------P 98 K++++ I K+ +V ++ + L LQ + + Sbjct: 640 STKLQSVADNICLRSKSTDRVSLVFSYWTTTLNLLQTMLEDRGIVLRRIDGSLGNGERLR 699 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + N+ I +L + GL L + W+ +E + R + Sbjct: 700 VLNEFKNDPAISVLLITMQTGAVGLTLT-VATQVHIIEPQWNPS-----VEEQAIARALR 753 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLR 185 G V V+ I +NT++E ++ Sbjct: 754 MGQSNIVKVFRYIMKNTVEE--MEAQE 778 >gi|327283199|ref|XP_003226329.1| PREDICTED: e1A-binding protein p400-like [Anolis carolinensis] Length = 3122 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 72/193 (37%), Gaps = 25/193 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y+ ++L L+ + + + Q + + + K++AL V+ Sbjct: 1816 LYNHKMKQLRHHLKEK------AGPFLHQLQQFITPQLLQFPDLRLVQYDAGKLEALAVL 1869 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWN-EGKI 109 ++K + +++ L L+ ++ +++ +N + +I Sbjct: 1870 LQKLKSEGRRVLILSQMILMLDILEHFLNFHFLTYVRIDECANQEERQESMKTFNRDKRI 1929 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 S G+NL + +VF+ + +++ + G + + +Y Sbjct: 1930 FCAILSSHSRSTGVNL-VEADTVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHIYR 1983 Query: 170 LIAQNTIDELVLQ 182 L++ N+++E +L+ Sbjct: 1984 LVSGNSVEEKLLK 1996 >gi|312104297|ref|XP_003150368.1| hypothetical protein LOAG_14827 [Loa loa] gi|307754467|gb|EFO13701.1| hypothetical protein LOAG_14827 [Loa loa] Length = 156 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 6/108 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R + + +D + + + G G+NL +I+VF L W+ Sbjct: 12 RSIRIDGTTVSRSRDEQCRLFQENDDVMVAVLSITAAGIGVNLTA-ASIVVFAELHWNPG 70 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G K +VFV YLIA+ T D+++ ++ K + Sbjct: 71 TL-----KQAEDRAHRLGQKDSVFVQYLIAKGTADDVLWPLIQKKLDV 113 >gi|281207984|gb|EFA82162.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 498 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 50/150 (33%), Gaps = 7/150 (4%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EG 107 K + D+ + +I + + + + + Sbjct: 112 KFIEDKLEDNSKFLIFAHHKTVMDGIEQLVKKKKVEYIKIDGTTPAHARSNLVNIFQTDE 171 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 KI + + G GL L ++ +F L+W R + G R+V + Sbjct: 172 KIKVAILSITAAGTGLTLTA-ASVAIFAELYWTPGVLM-----QAEARVHRFGQNRSVLI 225 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 YL+ NTIDE + L +K + +L+ Sbjct: 226 QYLVGINTIDESIWSMLESKKDVLGRILDG 255 >gi|260793856|ref|XP_002591926.1| hypothetical protein BRAFLDRAFT_184347 [Branchiostoma floridae] gi|229277139|gb|EEN47937.1| hypothetical protein BRAFLDRAFT_184347 [Branchiostoma floridae] Length = 563 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 7/98 (7%) Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + + GL L +++VF L+W+ R Sbjct: 463 RQQLCDRYQTQDSCQVALLSITAASTGLTLTA-ASLVVFTELFWNPGVLV-----QAEDR 516 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G + V V+YL+A+ T D+ + ++ K + Sbjct: 517 AHRIGQQDCVNVHYLVARGTADDYIWPLVQGKLDVLSK 554 >gi|298712299|emb|CBJ26750.1| conserved unknown protein [Ectocarpus siliculosus] Length = 238 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 8/93 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 D N+ + + G+NL N + +L E+ + R Sbjct: 98 DIQANAFANDPPTTVFLLSVRAGAVGINLTQ-ANHVFLLEPMLNLAL-----EKQAIGRV 151 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G R V V L+ ++++ +L K Sbjct: 152 HRLGQTRPVTVTKLVLADSVETRILAM--RKMQ 182 >gi|153004208|ref|YP_001378533.1| helicase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152027781|gb|ABS25549.1| helicase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 921 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 DK ++E+ + +L + GLNLQ+ N++V + L W+ + +Q I R Sbjct: 475 DKRQALVEEFRN-RTQILIMT-EAGAEGLNLQF-CNLVVNYDLPWNPQRVEQRIGRC--- 528 Query: 155 RQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G +R V V + + N D + + L K + D + + Sbjct: 529 --HRYGQQRDVLVLNFLNRQNAADNRLYELLSQKLALFDGVFGS 570 >gi|113476663|ref|YP_722724.1| helicase-like [Trichodesmium erythraeum IMS101] gi|113477649|ref|YP_723710.1| helicase-like [Trichodesmium erythraeum IMS101] gi|110167711|gb|ABG52251.1| helicase-like [Trichodesmium erythraeum IMS101] gi|110168697|gb|ABG53237.1| helicase-like [Trichodesmium erythraeum IMS101] Length = 1065 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 6/103 (5%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 Q++ G I +L S GLNLQ G +++ + + W+ +Q I R+ Q Sbjct: 824 KEKIKQKFRAGSIKILLCT-ESASEGLNLQTCG-VIINYDMPWNPMRVEQRIGRLDRIGQ 881 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V +Y T++ V ++LR + ++ L+ Sbjct: 882 F----YPTVRIYNFYYDGTVEAKVYKKLRDRIDTFQNIVGNLQ 920 >gi|3068759|gb|AAC41305.1| Mi-2 [Xenopus laevis] Length = 410 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + +V + W+ + +R + G R V +Y + + +++E + Q + Sbjct: 1 ATADTVVIYDSDWNP-----HNDIQAFSRAHRIGQNRKVMIYRFVTRASVEERITQVAKK 55 Query: 187 KSTIQDLLL 195 K + L++ Sbjct: 56 KMMLTHLVV 64 >gi|146318616|ref|YP_001198328.1| SNF2 family protein [Streptococcus suis 05ZYH33] gi|145689422|gb|ABP89928.1| SNF2 family protein [Streptococcus suis 05ZYH33] Length = 2274 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1902 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1961 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 1962 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 2008 >gi|253751738|ref|YP_003024879.1| hypothetical protein SSUSC84_0870 [Streptococcus suis SC84] gi|251816027|emb|CAZ51647.1| hypothetical protein SSUSC84_0870 [Streptococcus suis SC84] Length = 2274 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1902 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1961 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 1962 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 2008 >gi|261334529|emb|CBH17523.1| SNF2 DNA repair protein, putative [Trypanosoma brucei gambiense DAL972] Length = 1068 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 15/126 (11%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + +T + ++ + + L + G GL + ++ + Sbjct: 689 RPIVFCRLDGRKTEWERSEALRSFASSTGADLFLLSTKAGGIGLTITS-ATRVIIADGSF 747 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--A 197 + + + + R + G + V+ Y L+ T + + Q+ K + ++ + Sbjct: 748 NPAD-----DTQAIGRAYRYGQTQPVYAYRLVCYQTFEHRMFQQKLAKEWLFRTVVEEAS 802 Query: 198 LKKETI 203 LK++++ Sbjct: 803 LKRDSL 808 >gi|239817547|ref|YP_002946457.1| SNF2-related protein [Variovorax paradoxus S110] gi|239804124|gb|ACS21191.1| SNF2-related protein [Variovorax paradoxus S110] Length = 1291 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 10/127 (7%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 Y+F + ++ G + + + + ++ + G GLN+ N + Sbjct: 988 YYFLKETFGIRPFIINGDSQGRQGYIDKFSAKSGFDVIILSTLAAGAGLNVTA-ANHVFH 1046 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY--YLIAQN--TIDELVLQRLRTKSTI 190 F+ W+ + E R + G +R VFVY ++A N T + + Q L+ K+ + Sbjct: 1047 FTRAWNPSK-----ESQATDRAFRIGQERDVFVYCPTVVADNFRTFELRLDQLLKRKAGL 1101 Query: 191 QDLLLNA 197 L+ Sbjct: 1102 AGSTLDD 1108 >gi|71755459|ref|XP_828644.1| SNF2 DNA repair protein [Trypanosoma brucei TREU927] gi|70834030|gb|EAN79532.1| SNF2 DNA repair protein, putative [Trypanosoma brucei] Length = 1068 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 15/126 (11%), Positives = 46/126 (36%), Gaps = 9/126 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + +T + ++ + + L + G GL + ++ + Sbjct: 689 RPIVFCRLDGRKTEWERSEALRSFASSTGADLFLLSTKAGGIGLTITS-ATRVIIADGSF 747 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--A 197 + + + + R + G + V+ Y L+ T + + Q+ K + ++ + Sbjct: 748 NPAD-----DTQAIGRAYRYGQTQPVYAYRLVCYQTFEHRMFQQKLAKEWLFRTVVEEAS 802 Query: 198 LKKETI 203 LK++++ Sbjct: 803 LKRDSL 808 >gi|189501403|ref|YP_001960873.1| helicase domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189496844|gb|ACE05392.1| helicase domain protein [Chlorobium phaeobacteroides BS1] Length = 774 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 52/139 (37%), Gaps = 10/139 (7%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI---QEWNEGKIPLLFAHPAS 118 I + + L R + ++ ++ ++ + +L A A+ Sbjct: 116 IFTEHRDTLNYLEDRITRFLGRNEAVVIIHGSVGREERLKVQESFRHDPDVQVLLATDAA 175 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G+NLQ +++V + L W+ +Q RI + G +++ L+A +T + Sbjct: 176 G-EGINLQR-AHLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCYLWNLVADDTREG 228 Query: 179 LVLQRLRTKSTIQDLLLNA 197 V +RL K L Sbjct: 229 DVYRRLLEKLEQAREALGG 247 >gi|197308160|gb|ACH60431.1| Swi2/Snf2-related chromatin remodeling ATPase [Pseudotsuga macrocarpa] Length = 73 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+++N+ + + G G+NL + + + W+ + ++ + R + Sbjct: 1 IKDFNDPDSKFCIFLLSTRAGGLGINLTA-ADTCIIYDSDWNPQ-----MDMQAMDRCHR 54 Query: 159 AGFKRAVFVYYLIAQNTID 177 G + V V LI ++++ Sbjct: 55 IGQTKPVHVSRLITAHSVE 73 >gi|322708739|gb|EFZ00316.1| SNF2 family helicase [Metarhizium anisopliae ARSEF 23] Length = 1144 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 54/155 (34%), Gaps = 11/155 (7%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEV--IIEKANAAPIIVAYHFNSDLARLQKAFP 89 Q V K + + II N L + Sbjct: 859 LRQ--THLVSTVSSKLSYLIDSIVRHQDDDKIIIFYENENVAWYLASVLDMLQVQHLIYA 916 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + T ++ + ++ +L + GL++ + + F + + + + Sbjct: 917 RTLTTERKAQYVNTFHHNPVFRVLLMDLSQAAFGLDM-REASRVYFINPVLNPQ-----V 970 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 E + R R+ ++ VFV L+ +++IDE++L+R Sbjct: 971 EAQAIGRVRRISQQKPVFVETLVLKDSIDEVILER 1005 >gi|126453422|ref|YP_001067908.1| helicase, C-terminal:dead/deah box helicase, n-terminal [Burkholderia pseudomallei 1106a] gi|242317373|ref|ZP_04816389.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Burkholderia pseudomallei 1106b] gi|126227064|gb|ABN90604.1| heliCase, c-terminal:dead/deah box helicase, n-terminal [Burkholderia pseudomallei 1106a] gi|242140612|gb|EES27014.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Burkholderia pseudomallei 1106b] Length = 1043 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 16/171 (9%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------P 89 + + E KA + + + IV F + L + Sbjct: 501 FGFADLSRNDSKFAEFSKAFKRFMAEDRDTKAIVFTTFRATARYLVERLSAENVEAGLLM 560 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G DKD + +L G++LQ+ ++V + L W+ +Q I Sbjct: 561 GGAEFDKDAVVSAFREDRNCRVLVCT-DVAAEGVDLQF-CRLVVNYDLPWNPMRIEQRIG 618 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 RI Q + + V+ + ++TID L++ RL + + + L ++ Sbjct: 619 RIDRIGQM----SKRILVWNFVHKDTIDALIIARLAKRIGVFESTLGETEE 665 >gi|119500356|ref|XP_001266935.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181] gi|119415100|gb|EAW25038.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181] Length = 1181 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 45/121 (37%), Gaps = 9/121 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + +I + HGL++ + + F + Sbjct: 932 YRMYASTLSPELRTSYLNLFRESEEIRVFLMDLHQASHGLHI-ANASRVFFVNP-----I 985 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 Q +E + R + G R V+V L+ ++T+++ +L+R + + + + +K+ + Sbjct: 986 WQPNVESQAIKRAHRIGQTRPVYVETLVLKDTLEDKMLKR---RKAMSEKEMQEAEKDLL 1042 Query: 204 H 204 Sbjct: 1043 D 1043 >gi|157873415|ref|XP_001685219.1| helicase [Leishmania major strain Friedlin] gi|68128290|emb|CAJ08421.1| helicase-like protein [Leishmania major strain Friedlin] Length = 949 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 7/93 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + L + G GLNL G + ++ ++ + V R + G + V Sbjct: 780 QPGVFLFLISTRAGGTGLNLT-GADTVILLDSDFNP-----HNDLQAVDRCHRIGQRNPV 833 Query: 166 FVYYLIAQNTID-ELVLQRLRTKSTIQDLLLNA 197 VY L++ +T++ E + K ++ L+L Sbjct: 834 AVYRLVSPHTVEDEWHSGIVDRKLKLEHLVLGG 866 >gi|254481757|ref|ZP_05095000.1| Type III restriction enzyme, res subunit family [marine gamma proteobacterium HTCC2148] gi|214037886|gb|EEB78550.1| Type III restriction enzyme, res subunit family [marine gamma proteobacterium HTCC2148] Length = 1180 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 62/185 (33%), Gaps = 24/185 (12%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKA--- 87 Q+ E D K L+ II++ ++V F L+ L + Sbjct: 639 QIVKKITAVKELAGALGDDDPKYDRLKKIIQEKQALPNRRLMVFSTFRHTLSYLSERLTQ 698 Query: 88 -------FPQGRTLDKDPCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 G + + + +L GL+ Q+ + +V + Sbjct: 699 DGYEIGLVHGGVPDSERVLLRNRFKLDSNDSDSLDVLLFS-EVGCEGLDYQF-CDAMVNY 756 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 L W+ + +Q I RI Q+ V +Y LI T+D + R + I + + Sbjct: 757 DLPWNPMKIEQRIGRIDRNGQK----SEKVVIYNLITPGTVDAEIYDRCLMRIGIFNRSV 812 Query: 196 NALKK 200 A ++ Sbjct: 813 GASEE 817 >gi|238588607|ref|XP_002391776.1| hypothetical protein MPER_08746 [Moniliophthora perniciosa FA553] gi|215456905|gb|EEB92706.1| hypothetical protein MPER_08746 [Moniliophthora perniciosa FA553] Length = 219 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 6/114 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLW 138 ++ + + + + E + + G+ L G N +V F Sbjct: 22 EIELVPQYCGIANSAQRVEKGPDEQGVDFYKIKTPTGHAGAGGVGLNLTGANRVVIFDPN 81 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 W+ + + R + G R V+VY L+ ++EL+ R K Sbjct: 82 WNPAH-----DLQAMDRAFRFGQWRDVYVYRLLGAGAMEELIYARQLLKQQQMA 130 >gi|307110846|gb|EFN59081.1| hypothetical protein CHLNCDRAFT_9310 [Chlorella variabilis] Length = 374 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 52/164 (31%), Gaps = 28/164 (17%) Query: 4 YHK-----FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-KIK 57 Y + QRE+ +G N + + N + + + E ++ Sbjct: 215 YQQALFRLMQREMQGTGRGGLKGVNNVLMEM---RNICNHPLISEAALPPHSLPAEVRLC 271 Query: 58 ALEVIIEKA------NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 ++++ +++ L + G K + Sbjct: 272 GKLELLDRMLVKLRAGGHKVLLFSTMTRALDVVSDYLGWRGFRHLRLDGGTAAGKRGELV 331 Query: 102 QEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + +N+ G + + + G GLNLQ G + ++ + W+ + Sbjct: 332 ERFNDPGGGVFVFLLSIRAGGVGLNLQ-GADTVIMYDTDWNPQM 374 >gi|295980982|emb|CBJ57230.1| hypothetical protein [Streptococcus pneumoniae] Length = 461 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 6/118 (5%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +K ++ N G++ +L A G GLN+Q + + W + QQ Sbjct: 89 FVHDANSDEKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQ 148 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 RI Q + V +Y+ I + + D + K ++ + KE I Sbjct: 149 RNGRIIR----QGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQIMTS--KEPIR 200 >gi|225869333|ref|YP_002745281.1| helicase [Streptococcus equi subsp. zooepidemicus] gi|225702609|emb|CAX00640.1| putative helicase [Streptococcus equi subsp. zooepidemicus] Length = 2281 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T DK ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1909 FVHDANTDDKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1968 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 1969 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 2015 >gi|323186569|gb|EFZ71913.1| helicase conserved C-terminal domain protein [Escherichia coli 1357] Length = 2221 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 16/198 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----------KEVHDEKIKALEVIIE 64 +G+ I + ++ K ++ A+ + K K K + Sbjct: 1334 EGKQIIFTDEKTQHQKLKRIICNALNLEPSKVGILNAQTVAEAGKTGQKLKAVKPPKELP 1393 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 I Y+ L A +L ++ EG+ P++ + G+N Sbjct: 1394 DEPTDAQIAKYNEQMALYDAYIAQQNEMSLGGLEKIAADFQEGRTPIIICN-KKAEVGIN 1452 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + +L W Q R +A V V+Y + + DE L+ L Sbjct: 1453 LHRGTTDIHHLTLPWTPASIAQRNGRGARVGSNRAS----VRVHYYCGKGSFDEYRLKTL 1508 Query: 185 RTKSTIQDLLLNALKKET 202 + K+ +L + K E Sbjct: 1509 KRKAGWISDILRSDKSEM 1526 >gi|313889303|ref|ZP_07822954.1| helicase C-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313122351|gb|EFR45439.1| helicase C-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 1555 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1183 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1242 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 1243 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 1289 >gi|194766057|ref|XP_001965141.1| GF23602 [Drosophila ananassae] gi|190617751|gb|EDV33275.1| GF23602 [Drosophila ananassae] Length = 752 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 44/140 (31%), Gaps = 6/140 (4%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 K K +I ++ + Q R+ + + Sbjct: 530 KEKMKFIIFAHHRVMMDAISDCLAELKVHYIRIDGQTRSDLRADFVDTFQKNSSCKVALL 589 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 +C G+ L +++F L W+ +R + G +AV YL+A Sbjct: 590 SLKACNSGITLTA-AEMILFAELDWNPSTL-----AQAESRAHRIGQTKAVICRYLMAHG 643 Query: 175 TIDELVLQRLRTKSTIQDLL 194 T D+ + L+ K + + Sbjct: 644 TADDTIWAMLKNKQEVLSKV 663 >gi|78190557|gb|ABB29600.1| SWI/SNF-related matrix-associated regulator of chromatin a5 [Platynereis dumerilii] Length = 375 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 35/176 (19%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------- 42 K Y K QRE Y + ++I+ N + ++ + AN + Sbjct: 201 KIYIGLSKMQREWYTKILMKDIDVVNGAGKSDKMRLLNILMQLRKCANHPYLFDGAEPGP 260 Query: 43 -DEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR------- 92 + K+ L+ ++ +A + +++ L L+ R Sbjct: 261 PYTTDQHLVDNAGKMVLLDKLLMRLEAQDSRVLIFSQMTRMLDILEDYCQWRRYEYCRLD 320 Query: 93 ---TLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ +I ++N + + G G+NL +++V + W+ + Sbjct: 321 GQTPHEERQKSIDDFNRPDSTKFVFMLSTRAGGLGINL-ATADVVVLYDSDWNPQV 375 >gi|301091941|ref|XP_002896145.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262094965|gb|EEY53017.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 1481 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 56/176 (31%), Gaps = 14/176 (7%) Query: 37 NGAV-YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL-------ARLQKAF 88 + + + D ++ +E++ ++ + ++ ++ L R+ Sbjct: 1162 SHPSPLHCDGGSLGSKLDALLERVEMLRQENPSVKCLLFSQWSQMLELVMQPLRRVGVYC 1221 Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T + P + ++ + A P G ++ I Sbjct: 1222 FMYGTKRQLPKLLAQFQACPAACVLALPFKVGANGLNIVEATEVLLIEPLLS-----SSI 1276 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 E V R + G R V+ I Q +++E + RL K + KE I+ Sbjct: 1277 EAQAVNRVHRLGQTRQTRVHRFIVQGSVEERIF-RLGHKLKDHGAEDDQESKEEIN 1331 >gi|83589502|ref|YP_429511.1| helicase-like [Moorella thermoacetica ATCC 39073] gi|83572416|gb|ABC18968.1| Helicase-like protein [Moorella thermoacetica ATCC 39073] Length = 972 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 24/158 (15%) Query: 52 HDEKIKALEVIIEK------ANAAPIIVAYHFNSD----------LARLQKAFPQGRTLD 95 +D K L II + I+ F L + Sbjct: 486 NDIKFTRLLEIINELRIQENNPRLKFIIFTEFRETQAYLEERLTSLGYRTALINGAMSTT 545 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ + + G G+NLQ+ +IL+ + L W+ +Q I RI Sbjct: 546 ERIAQVERFRREAD--FLISTDAGGEGINLQF-CHILINYDLPWNPMRLEQRIGRID--- 599 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G + V V L +T++ V + + K Sbjct: 600 --RIGQEHDVKVINLQLADTVENRVREVIENKLDTIRR 635 >gi|125984352|ref|XP_001355940.1| GA17662 [Drosophila pseudoobscura pseudoobscura] gi|54644258|gb|EAL32999.1| GA17662 [Drosophila pseudoobscura pseudoobscura] Length = 747 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 6/112 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + Q R+ + N+ + +C G+ L ++VF L W+ Sbjct: 553 HHIRIDGQTRSDLRADMVSAFQNKSSCRVAVLSLKACNAGITLTA-AELIVFAELDWNPS 611 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +R + G + V YL+A T D+ + + L K + + Sbjct: 612 TL-----AQAESRAHRIGQTKTVICRYLLANETADDTIWKMLINKQKVLSQV 658 >gi|328852113|gb|EGG01261.1| hypothetical protein MELLADRAFT_79036 [Melampsora larici-populina 98AG31] Length = 2231 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 5/132 (3%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + R T + + E+ + I +L H N Sbjct: 2094 YEALEHRDIGVARVKGTARQQMQVMTEFQEEADPDIRVLLLHATDSSASGANLTNANYAF 2153 Query: 134 FFSLWWDL-EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 F S + ++ + E + R R+ G + V V L+ +TID + K+ + Sbjct: 2154 FVSPLFLPTQDKFKACETQAIGRLRRYGQTKKVHVIRLLTTDTIDTQIYGHRHQKTQDEL 2213 Query: 193 LL-LNALKKETI 203 L + A +K+ I Sbjct: 2214 RLEIEAARKKQI 2225 >gi|212542133|ref|XP_002151221.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] gi|210066128|gb|EEA20221.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] Length = 1209 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPAS 118 ++II N L + + + + + E + +L Sbjct: 917 KIIIFYENNNTAFWIAEGLELLGIDFRIYANTLKTSQKAAYLSLFEESSSVRILLMDLRQ 976 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + W +E + R + G R VFV L+ ++T++E Sbjct: 977 ASHGLHI-ASASRVFIVNPIWRP-----YVESQAIKRAHRIGQTRPVFVETLVLKDTLEE 1030 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L R + + + + +K+ + Sbjct: 1031 KMLHR---RQEMSNSEMQHAEKDMLD 1053 >gi|254521535|ref|ZP_05133590.1| SNF2-related [Stenotrophomonas sp. SKA14] gi|219719126|gb|EED37651.1| SNF2-related [Stenotrophomonas sp. SKA14] Length = 582 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 49/140 (35%), Gaps = 13/140 (9%) Query: 63 IEKANAAPIIVAYHFNSDLARLQK--------AFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 + + +++ + Q+ + + ++ + + G ++ Sbjct: 403 LLLESGQKVLLFGWHREVYSIWQEKLAAYNPVMYTGSESPNQKQAAKEAFIAGDSQVMLI 462 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 S LQ+ + +VF L W H+Q I R+ + G V Y+L++ + Sbjct: 463 SLRSGAGIDGLQHVCSTVVFGELDWSPGVHEQCIGRV-----HRDGQAEPVMAYFLLSDS 517 Query: 175 TIDELVLQRLRTKSTIQDLL 194 D +V L K + + Sbjct: 518 GSDPIVSDVLGVKREQIEGV 537 >gi|70993794|ref|XP_751744.1| SNF2 family helicase [Aspergillus fumigatus Af293] gi|66849378|gb|EAL89706.1| SNF2 family helicase, putative [Aspergillus fumigatus Af293] gi|159125336|gb|EDP50453.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163] Length = 1180 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 45/121 (37%), Gaps = 9/121 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + +I + HGL++ + + F + Sbjct: 931 YRMYASTLSPELRTSYLNLFRESEEIRVFLMDLHQASHGLHI-ANASRVFFVNP-----I 984 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 Q +E + R + G R V+V L+ ++T+++ +L+R + + + + +K+ + Sbjct: 985 WQPNVESQAIKRAHRIGQTRPVYVETLVLKDTLEDKMLKR---RKAMSEKEMQEAEKDLL 1041 Query: 204 H 204 Sbjct: 1042 D 1042 >gi|325120874|emb|CBZ56429.1| putative SNF2 family N-terminal domain-containing protein [Neospora caninum Liverpool] Length = 791 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 6/142 (4%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCG 120 + + +IV H + L +++ Q + + + + +CG Sbjct: 502 LFKSGGDMKVIVFAHHRAVLDYIEEYLQQTEKKQSVRIDGRTPQDKRERLVALLSITACG 561 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGLNL G ++F L+W + Q +R ++ ++YLIA+ T+DE V Sbjct: 562 HGLNLTAAGT-VIFAELYWVPGQMIQAEDRSHRI----GTEFSSIQIHYLIAEGTLDETV 616 Query: 181 LQRLRTKSTIQDLLLNALKKET 202 + L+ K + L+ +++ Sbjct: 617 FRILQRKWRLMTCTLDGEQQQL 638 >gi|118580295|ref|YP_901545.1| helicase domain-containing protein [Pelobacter propionicus DSM 2379] gi|118503005|gb|ABK99487.1| helicase domain protein [Pelobacter propionicus DSM 2379] Length = 1172 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 78/217 (35%), Gaps = 31/217 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKC----------LQLANGAVYYDEEKHWKEVHDE 54 + + Y + ++ +A + + A+ V+ +++ W+E+ + Sbjct: 431 DEMGDDEYERFEEAVVDQATAAQTIQELEVEIHILEGLVNQASDVVHSGQDRKWEELSNL 490 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCTI 101 E+ + +I+ L L G D Sbjct: 491 LQNTPEMRDKDGRQRKLIIFTEHKDTLHYLVMKIRGLIGSEDSVVTIHGGVKRDDRRKIQ 550 Query: 102 QEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + N+ ++ +L A + G G+NLQ N++V + L W+ +Q RI + G Sbjct: 551 ELFRNDPEVRVLVAT-DAAGEGINLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIG 603 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + ++ ++A T + V QRL K I+ L Sbjct: 604 QDQVCHLWNMVANETREGDVFQRLLDKLEIERQALGG 640 >gi|315052578|ref|XP_003175663.1| DNA repair protein RAD5 [Arthroderma gypseum CBS 118893] gi|311340978|gb|EFR00181.1| DNA repair protein RAD5 [Arthroderma gypseum CBS 118893] Length = 1073 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 60/165 (36%), Gaps = 21/165 (12%) Query: 47 HWKEVHDEKIKALEV----IIEKANAAPIIVAYHFN---------SDLARLQKAFPQGRT 93 + K++A++ ++++ I + F D+ G+ Sbjct: 859 TNYNIPSAKLRAVKTFVSRWLKESPGTKITIFTQFIGMISALCTLCDVEGWGYTTLCGKI 918 Query: 94 LDK-DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + I+ + + +L + + G GLNL N + LWW+ + IE+ Sbjct: 919 HHRTRHSNIKRFREDKNTSILISSLKTGGVGLNLT-MANKCILVDLWWN-----EAIEQQ 972 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G ++ V + + +NT+D+ + K+ + Sbjct: 973 AFCRLFRIGQEKDVEIVRICVENTVDDRLQLIQSVKTKHIKQAMG 1017 >gi|329667808|gb|AEB93756.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus johnsonii DPC 6026] Length = 630 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 21/166 (12%) Query: 50 EVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKD 97 V K + +I+K + ++V F + Sbjct: 444 NVESPKFEMGIDLIDKLVSQGKKVLVWGMFVGTMQKITDTLNGMGIKTILVYGATPKQDR 503 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I + G +L ++P + G ++L + V+F ++L Q +RI Sbjct: 504 EGMINNFRTGDAQVLVSNPNTLGESISLHQKVHDAVYFEYNFNLTFMLQSRDRINRLGLP 563 Query: 158 QAGFKRAVFVYYLIAQ------NTIDELVLQRLRTKSTIQDLLLNA 197 + R YYL+ + ID V ++L+ K + ++ Sbjct: 564 ANQYTR---YYYLMTKGDVAHMGFIDNTVYKKLKDKEKVMIDAIDG 606 >gi|331655819|ref|ZP_08356808.1| conserved hypothetical protein [Escherichia coli M718] gi|331046593|gb|EGI18682.1| conserved hypothetical protein [Escherichia coli M718] Length = 1830 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 16/198 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----------KEVHDEKIKALEVIIE 64 +G+ + + ++ K ++ A+ + K K K + Sbjct: 943 EGKQVIFTDEKTQHQKLKRIICNALDLEPSKVGILNAQTVAEAGKTGKKLKAVKPPKELP 1002 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 I Y+ L A +L ++ EG+ P++ + G+N Sbjct: 1003 DEPTDAQIAKYNEQMALYDAYIAQQNEMSLGGLEKIAADFQEGRTPIIICN-KKAEVGIN 1061 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + +L W Q R +A V V+Y + + DE L+ L Sbjct: 1062 LHRGTTDIHHLTLPWTPASIAQRNGRGARVGSNRAS----VRVHYYCGKGSFDEYRLKTL 1117 Query: 185 RTKSTIQDLLLNALKKET 202 + K+ +L + K E Sbjct: 1118 KRKAGWISDILRSDKSEM 1135 >gi|301608898|ref|XP_002934016.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like, partial [Xenopus (Silurana) tropicalis] Length = 489 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 48/148 (32%), Gaps = 20/148 (13%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ----------- 102 K A++ I+ + F L+ LQ I Sbjct: 348 AKAGAVKDYIKMMLENDKLKFLVFAHHLSMLQACTEAAIESKARYIRIDGSVPSSERIHL 407 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 N+ + + + G GL +VF L+WD + R + Sbjct: 408 VHQFQNDPETRVAILSIQAAGQGLTFTA-ATHVVFAELYWDPGHI-----KQAEDRAHRI 461 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G +V ++YLIA+ T+D L+ L K Sbjct: 462 GQCSSVHIHYLIARGTMDTLMWGMLNRK 489 >gi|331234292|ref|XP_003329806.1| ATPase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309308796|gb|EFP85387.1| ATPase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 328 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 53/168 (31%), Gaps = 24/168 (14%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEV----IIEKANAAPIIV 73 ++ + + V QL N ++EK KI L + N A ++ Sbjct: 156 DSIHFVGELVNLRQLCNPPALIEKEKGTGGYFWNQSSKIVHLLKDLPLFLASGNQARAVI 215 Query: 74 AYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 F L + + + + W + +L A + G G Sbjct: 216 FSEFKRFLQIIEIALNEWGIQFTTHYGKMDNNTQRKNLEYFWRDVSCKVLLATIKTEGVG 275 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++L + + W+ +Q I+R+ Q G K V V L Sbjct: 276 IDL-RCAHKVYLMEPTWNPAVEEQAIDRL-----YQIGQKERVQVVRL 317 >gi|157869750|ref|XP_001683426.1| hypothetical protein [Leishmania major strain Friedlin] Length = 471 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + G GLNLQ + + + ++ + + ++R + G + V V+ L Sbjct: 123 CFLISKVAGGAGLNLQA-ADTVFLLDVDYNPQR-----DAQALSRVYRVGQSKEVRVFRL 176 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + I+ ++ K + ++ A Sbjct: 177 IIDHAIEHDIVAIHEAKDDLGRAVVQA 203 >gi|224100259|ref|XP_002311805.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222851625|gb|EEE89172.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 3427 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 65/268 (24%), Gaps = 87/268 (32%) Query: 3 QYHKFQRELYCDLQGENIE--AFNSASKTVKCLQLANGAVYYDEEKHW---------KEV 51 Y K + D G A + + ++ + N Sbjct: 1286 AYQKLLMKRVEDNLGSIGNPKARSVHNSVMELRNICNHPYLSQLHADEACSSLVDTLIPK 1345 Query: 52 H--------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------G 91 H K++ L+ ++ K ++ L +++ Sbjct: 1346 HFLPPIIRLCGKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEEYLTWKQYRYLRLDGH 1405 Query: 92 RTLDKDPCTIQEWNEGKIPLL--------------------------------------- 112 + I +N+ P Sbjct: 1406 TSGGDRGSLIDSFNQQDSPYFIFLLRSFILTNQIFPSLCFCPGDSLSCMLGVLDALFGVY 1465 Query: 113 ---FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 + G G+NLQ + ++ F W+ + ++ R + G KR V Sbjct: 1466 QGVVVSIRAGGVGVNLQA-ADTVIIFDTDWNPQ-----VDLQAQARAHRIGQKREVQ--- 1516 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 T++E V K + + + A Sbjct: 1517 -----TVEEQVRASAEHKLGVANQSITA 1539 >gi|154309155|ref|XP_001553912.1| hypothetical protein BC1G_07472 [Botryotinia fuckeliana B05.10] gi|150852515|gb|EDN27707.1| hypothetical protein BC1G_07472 [Botryotinia fuckeliana B05.10] Length = 1420 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 21/161 (13%) Query: 51 VHDEKIKALEVII----EKANAAPIIVAYHFN---SDLARLQKAFPQGRTL--------D 95 + K AL+ ++ E+A +++ F + R+ KA G Sbjct: 1201 IPSAKTTALKALLLKGFEEAPDDKVVIYVQFRTLARIIGRMCKAEGWGFLYLTGDASLEH 1260 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + T + N I +L A G GLN + N + LWW+ Q R Sbjct: 1261 RSKATKEFRNRDDIQILIAGLKCGGLGLNFPF-ANRCISLDLWWNHAVEQ-----QAFGR 1314 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + ++ L+ N++D +L K + ++ Sbjct: 1315 IFRIGQNKETWMTRLVVANSVDMRLLGMQNWKLKACEKAID 1355 >gi|163848249|ref|YP_001636293.1| helicase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222526160|ref|YP_002570631.1| helicase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163669538|gb|ABY35904.1| helicase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222450039|gb|ACM54305.1| helicase domain protein [Chloroflexus sp. Y-400-fl] Length = 1189 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 7/107 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ Q ++ + +L A + G G+NLQ +++V + L W+ +Q R Sbjct: 563 MGREERRKAQEQFLHDPAVRVLVAT-DAAGEGINLQR-AHLMVNYDLPWNPNRLEQRFGR 620 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + G F++ L+A T + V +RL K L Sbjct: 621 I-----HRIGQTEVCFLWNLVADETREGDVYRRLLDKLEEARRALGG 662 >gi|156396819|ref|XP_001637590.1| predicted protein [Nematostella vectensis] gi|156224703|gb|EDO45527.1| predicted protein [Nematostella vectensis] Length = 1438 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 14/134 (10%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------PCTIQEWNEGKIPLLF 113 I + N+A +V + L + KA + + + I +L Sbjct: 1268 IRAEDNSAKCLVFSTWQDVLDVIAKALAENDVYFRHITTSRKLPEDLHAFKVDPDISVLL 1327 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 S +GLN+ ++ + + R + G + VY I Q Sbjct: 1328 LPLQSGSNGLNI-IEATHVLLVEPALNPAHEL-----QALGRVHRIGQTKPTHVYRFIIQ 1381 Query: 174 NTIDELVLQRLRTK 187 T++ + L+ K Sbjct: 1382 GTVESRMYTLLKGK 1395 >gi|315652132|ref|ZP_07905130.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315485624|gb|EFU76008.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 1191 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 58/165 (35%), Gaps = 24/165 (14%) Query: 51 VHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQGRTLD------------ 95 + D K L I+ + IIV F L L+K + Sbjct: 679 IDDPKFMRLLEIVNQKQKEDNNRIIVFSSFRHTLGYLKKNLKKHGIRVGQVDGSVPDEER 738 Query: 96 ---KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + I +L GL+ Q+ + ++ + L W+ +Q I RI Sbjct: 739 FNLRKRFLLDRNEKDAIDVLLFS-EVGCEGLDYQF-CDSMINYDLPWNPMRIEQRIGRID 796 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V +Y +I ++TID ++ R +K + + + Sbjct: 797 R----RGQKSDTVKIYNMITEDTIDAVIYDRCLSKIGVFEESIGD 837 >gi|194867550|ref|XP_001972094.1| GG15331 [Drosophila erecta] gi|190653877|gb|EDV51120.1| GG15331 [Drosophila erecta] Length = 1272 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ + I II+ + + L + +A ++ CT +++ Sbjct: 1103 GDFSTKISSIVELVLKIKGDNEMEKIIIFSQWQAILIEIARALSLNGIRFRNKCTNKDFE 1162 Query: 106 EGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + K P+ L + GLNL + + + Q I RI + G Sbjct: 1163 DFKNPVSNVTCLLMPLSKGSKGLNL-IEATHVFLVEPILNPSDEHQAIGRI-----HRFG 1216 Query: 161 FKRAVFVYYLIAQNTIDELVLQR---------LRTKSTIQDLLLNALKK 200 K+ V+ I T++E +L L T ++++ L++LKK Sbjct: 1217 QKKPTKVHRFIVNGTVEENILSLITSADDTTTLSTHWDLENMTLDSLKK 1265 >gi|115474249|ref|NP_001060723.1| Os07g0692600 [Oryza sativa Japonica Group] gi|113612259|dbj|BAF22637.1| Os07g0692600 [Oryza sativa Japonica Group] Length = 475 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N GK +L A +C G++L G + LV W+ + R + Sbjct: 340 RSDVMDKFNGDSAGKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKT-----RQAI 393 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G +R V+VY L+A T +E R K+ + ++ Sbjct: 394 ARAFRRGQERTVYVYLLVASGTWEEEKYNSNRRKAWMSKMVF 435 >gi|118403613|ref|NP_001072923.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Xenopus (Silurana) tropicalis] gi|123908803|sp|Q0P4U8|SMAL1_XENTR RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|112418502|gb|AAI21898.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Xenopus (Silurana) tropicalis] Length = 942 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 53/163 (32%), Gaps = 18/163 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAF 88 A+ + + ++ + ++ ++ +V H L Sbjct: 700 ALLLFYNRTAEAKIRSVLEYIMDLL-ESGREKFLVFAHHKLVLDHICEELGKKDVPYIRI 758 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++ K + + GL L +++VF L+W+ Sbjct: 759 DGNTSSADRQSLCHKFQMSEKSCVAVLSITAANMGLTL-SSADLVVFAELFWNPGVLI-- 815 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 816 ---QAEDRVHRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKV 855 >gi|291460281|ref|ZP_06599671.1| putative helicase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417036|gb|EFE90755.1| putative helicase [Oribacterium sp. oral taxon 078 str. F0262] Length = 1194 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 60/166 (36%), Gaps = 24/166 (14%) Query: 50 EVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAF---------------PQG 91 D K + +I++ +I+ F L+ L++ + Sbjct: 681 PKDDPKFDRMLEVIQEKQTTDNNRVIIFSSFRHTLSYLREKLTAQGIRVGQVDGSVPDEE 740 Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 R + + N + +LF GL+ Q+ + ++ + L W+ +Q I RI Sbjct: 741 RYKLRQRFLLDRDNVNAVDVLFFS-EVGCEGLDYQF-CDTMINYDLPWNPMRIEQRIGRI 798 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + V +Y +I Q TID ++ R +K + + + Sbjct: 799 DR----RGQKSDTVKIYNMITQGTIDAVIYDRCLSKIGVFEASIGD 840 >gi|290986627|ref|XP_002676025.1| predicted protein [Naegleria gruberi] gi|284089625|gb|EFC43281.1| predicted protein [Naegleria gruberi] Length = 467 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 80/227 (35%), Gaps = 37/227 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + +R++ +L + + K Q+ NG + D +K + + K++ + +I Sbjct: 240 RRLKRDVLTELPPKRRSKYYLHVKEEDLKQI-NG-IGGDSKKKFYQKDWGKLQKDKDVIA 297 Query: 65 KA--------------------NAAPIIVAYHFNS----------DLARLQKAFPQGRTL 94 K ++ H D+ + G T Sbjct: 298 KYVKTAEAKIDGIRSYLRKIIPKKEKFLIFAHHRRVMDAIEETDDDVKTYEYIRIDGETK 357 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D++ + + G GLN + +VF L W+ Q +R Sbjct: 358 DREGLAHHFRSTENCLVAILSMNVAGCGLNF-VPCSTVVFAELCWNPALLNQCEDRCHRI 416 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q+ A V + YL+A+ T+D+ + L K+ I DL LN K+E Sbjct: 417 GQKGAF----VDITYLLAKKTLDDFMWDLLTKKADITDLALNGQKEE 459 >gi|218515260|ref|ZP_03512100.1| putative helicase/DNA methylase hybrid protein [Rhizobium etli 8C-3] Length = 522 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + ++ A + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 183 RSALVDYFRDEG-QIMIAT-EAGAEGINLQF-CSLVVNYDLPWNPQRVEQRIGRC----- 234 Query: 157 RQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V I +N D+ V Q L K + + + A Sbjct: 235 HRYGQKHDVVVVNFINRKNEADQRVYQLLSEKFRLFEGVFGA 276 >gi|150006233|ref|YP_001300977.1| putative ATP-dependent helicase [Bacteroides vulgatus ATCC 8482] gi|149934657|gb|ABR41355.1| putative ATP-dependent helicase [Bacteroides vulgatus ATCC 8482] Length = 921 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 12/109 (11%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ I+ N ++ A A+ NI+ + L W+ +Q I Sbjct: 507 NMDLQERQKALIKFKNN--AQVMIATDAAGESLN--MQFCNIVFNYDLPWNPMAIEQRIG 562 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 R+ + G K V Y ++ N++D V + + K D +LN L Sbjct: 563 RVD-----RIGQKHPVIAYNMLTNNSVDTRVYEIIVEKL---DAILNEL 603 >gi|116630085|ref|YP_815257.1| SNF2 family DNA/RNA helicase [Lactobacillus gasseri ATCC 33323] gi|238854119|ref|ZP_04644466.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] gi|116095667|gb|ABJ60819.1| Superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri ATCC 33323] gi|238833195|gb|EEQ25485.1| superfamily II DNA/RNA helicase, SNF2 family [Lactobacillus gasseri 202-4] Length = 630 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 21/165 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDP 98 + K + +I+K + ++V F + Sbjct: 445 IESPKFELGIDLIDKLVSQGKKVLVWGMFVGTMQKITDTLNGMGIKTTLVYGATPKQDRE 504 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + G +L ++P + G ++L + V+F ++L Q +RI Sbjct: 505 GMINNFRTGDAQVLVSNPNTLGESISLHQTVHDAVYFEYNFNLTFMLQSRDRINRLGLSA 564 Query: 159 AGFKRAVFVYYLIAQ------NTIDELVLQRLRTKSTIQDLLLNA 197 + R YYL+ + ID V ++L+ K + ++ Sbjct: 565 DQYTR---YYYLMTKGDVAHTGFIDSTVYKKLKDKEKVMLDAIDG 606 >gi|289549357|ref|YP_003474345.1| helicase [Thermocrinis albus DSM 14484] gi|289182974|gb|ADC90218.1| helicase domain protein [Thermocrinis albus DSM 14484] Length = 1107 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 74/182 (40%), Gaps = 18/182 (9%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR---- 83 K + +Q A V ++E E+ K E I + I++ L Sbjct: 443 KLGELIQKAEKIVKSEKEVKLSELKTAIEKGFEEIRKMGGNPKILIFTESRDTLEYLVKK 502 Query: 84 ------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 T+D+ + + + + ++ A A+ G+NLQ+ +I++ + + Sbjct: 503 ISGWGYTVNYIHGDMTIDERIKEEKRFRD-ETQIMVATEAAG-EGINLQF-CHIMINYDI 559 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W+ +Q + RI + G ++ V ++ L+A++TI+ VL +L K L + Sbjct: 560 PWNPNRLEQRMGRI-----HRYGQQKDVHIFNLVAEDTIEGQVLVKLFEKLEEIKEKLGS 614 Query: 198 LK 199 K Sbjct: 615 DK 616 >gi|282598823|ref|YP_003359142.1| putative helicase [Clavibacter phage CMP1] gi|262212611|gb|ACY35947.1| putative helicase [Clavibacter phage CMP1] Length = 533 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 72/221 (32%), Gaps = 27/221 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANG-----AVYYDEEKH---WKEVHD 53 + + + + L+ A + ++ Q+ DE++ + Sbjct: 309 RMIKQMETDYIAWLEDNPTVAKLPVTARMRIRQMTLAVPSVIPATEDEKEEVYFDVDCES 368 Query: 54 EKIKALEVIIEKANAAPIIV---AYHFNSDLAR-------LQKAFPQGRTLDKDPCTIQE 103 + +E ++ ++ + F ++ R + + ++ Sbjct: 369 PTLDDIEEWLKAHPDEKVLFLAQSQKFLAEATRRFKAKGYQAFEWSGMASEASRDVAKEQ 428 Query: 104 WNEGKIPLLFAHPASCGHGLN-LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G + L+F S G G++ LQ NIL D E R + G Sbjct: 429 FKNGSLQLVFGQVQSIGTGIDGLQSATNILWSLETGDDATT-----EIQAEGRLDRRGQV 483 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R V I +IDE V+ + K + +LK+E + Sbjct: 484 RGVVHIKSIRAGSIDENVMGKQLEKRLAMNA---SLKRECV 521 >gi|298712291|emb|CBJ26742.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1307 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 17/136 (12%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEW-NEGKIP 110 I K + +V FNS L L++ P+ + + + + Sbjct: 1111 IHAKDPTSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGNMSRTQRTAALTAFAKDPPTT 1170 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + S G+NL N+ +E+ + R + G R V V L Sbjct: 1171 VFLLSVRSGAVGINLTQANNVF------LLEPLLNLALEKQAIGRVYRLGQTRPVTVTKL 1224 Query: 171 IAQNTIDELVLQRLRT 186 + +++I+ +L + Sbjct: 1225 VLKDSIETRILALQKK 1240 >gi|46127691|ref|XP_388399.1| hypothetical protein FG08223.1 [Gibberella zeae PH-1] Length = 873 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 5/84 (5%) Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G N++ W+ IE + R + G R V VY I Sbjct: 760 INQYWRGWDSLTLTEANMVHIVEPQWNPT-----IEDQAIARVVRMGQTRPVTVYRYIMN 814 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 ++++ VL+ + K+ I L + Sbjct: 815 ESVEQSVLKLQQRKTQIIKLSMQD 838 >gi|300933400|ref|ZP_07148656.1| SNF2-related protein [Corynebacterium resistens DSM 45100] Length = 948 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + E+ E L + G+NLQ+ ++LV + L W+ + +Q I R Sbjct: 482 DRRKALVDEFRERGR--LMIATEAAAEGINLQF-CSMLVNYDLPWNPQRIEQRIGR---- 534 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + + +E +L+ L K + + A Sbjct: 535 -AHRFGQKHNVVVVNFSNKGNLAEERILELLTEKFELFTSVFGA 577 >gi|242047042|ref|XP_002461267.1| hypothetical protein SORBIDRAFT_02g043870 [Sorghum bicolor] gi|241924644|gb|EER97788.1| hypothetical protein SORBIDRAFT_02g043870 [Sorghum bicolor] Length = 1205 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N EGK +L A +C G++L G + LV W+ + R + Sbjct: 1070 RSDVMDKFNSDREGKRKVLIASTTACAEGISLT-GASRLVMLDSEWNHSKT-----RQAI 1123 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G +R VFVY L+A T +E R K+ I ++ Sbjct: 1124 ARAFRPGQERMVFVYLLVASGTWEEDKYNSNRRKAWIAKMVF 1165 >gi|24659216|ref|NP_648034.1| CG7376 [Drosophila melanogaster] gi|7295362|gb|AAF50680.1| CG7376 [Drosophila melanogaster] Length = 1270 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ + I + IIV + + L + +A ++ CT ++++ Sbjct: 1101 GDFSTKISSVVELVLKIKGENEQEKIIVFSQWQAILIEIARALSLNGIQFRNKCTNKDFD 1160 Query: 106 E-----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + L + GLNL + + + ER + R + G Sbjct: 1161 DFKNPLSNVTCLLMPLSKGSKGLNL-IEATHVFLVEPILNPGD-----ERQAIGRIHRFG 1214 Query: 161 FKRAVFVYYLIAQNTIDELVLQR---------LRTKSTIQDLLLNALKK 200 KR V+ I TI+E +L L T ++++ L++LKK Sbjct: 1215 QKRPTKVHRFIVNETIEENILSLITSADDTTTLSTHWDLENMTLDSLKK 1263 >gi|84616885|emb|CAJ13779.1| virulence associated protein [Desulfococcus multivorans] Length = 965 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 73/207 (35%), Gaps = 33/207 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y +EL +L ++ A + + A E+ + I Sbjct: 436 ELYDMDGQELLDELLKSHVSALQSEGSHVETLL--------DAAVRCEQAGPDAKAEALI 487 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 + + + + N +++ F L++ +++ + Sbjct: 488 EWIYKLQAEENEPDLKVLIFTEFVPTQQMLKEFLEARGISVVTLNGSMAMEERGAAQDAF 547 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +L + G GLNLQ+ ++++ + + W+ +Q I R+ + G + Sbjct: 548 RKSH-RVLV-STDAGGEGLNLQF-AHVIINYDIPWNPMRLEQRIGRVD-----RIGQPKT 599 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQ 191 V + +++++ V + L K ++ Sbjct: 600 VQAINFVFEDSVEFRVREVLEQKLSVI 626 >gi|168051804|ref|XP_001778343.1| predicted protein [Physcomitrella patens subsp. patens] gi|162670320|gb|EDQ56891.1| predicted protein [Physcomitrella patens subsp. patens] Length = 921 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 46/165 (27%), Gaps = 6/165 (3%) Query: 3 QYHKF-QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y F + + + + + +L N + + E + Sbjct: 475 LYRHFIRSKNVRQALEDQTKRAKVLASITALKKLCNHPKLIYD--TIRAGGSEAAGFGDC 532 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASC 119 + + + + ++ K + +N+ + Sbjct: 533 LKLFPPHLTLDLFAQICRERNYPFVRLDGTTSIGKRQKLVSRFNDPNQNEFAFLLSSKAG 592 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G GLNL GGN LV F W+ +Q+ +R Q + Sbjct: 593 GCGLNL-IGGNRLVLFDPDWNPATDKQVFQRQMSKEGLQKVVDKE 636 >gi|116191603|ref|XP_001221614.1| hypothetical protein CHGG_05519 [Chaetomium globosum CBS 148.51] gi|88181432|gb|EAQ88900.1| hypothetical protein CHGG_05519 [Chaetomium globosum CBS 148.51] Length = 219 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 30/91 (32%), Gaps = 6/91 (6%) Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + HGLNL N + F WW R + G + V L+A Sbjct: 38 TKSCGAHGLNLTA-ANRAIVFDHWWHEGLEC-----QAFARIHRIGQTKTVHTIKLVAAG 91 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++DE +L K L + HV Sbjct: 92 SMDETILGMQARKRETIGLAVGDGTARPTHV 122 >gi|296111469|ref|YP_003621851.1| helicase, SNF2 family [Leuconostoc kimchii IMSNU 11154] gi|295833001|gb|ADG40882.1| helicase, SNF2 family [Leuconostoc kimchii IMSNU 11154] Length = 616 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 65/175 (37%), Gaps = 24/175 (13%) Query: 47 HWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTL 94 + + K A +I K A +IV F + Sbjct: 431 DVETMRTPKFDAGMSLIRKLVAEGKKVIVWGMFVGTMRKVQRELLESGIEANLVYGDTPK 490 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I + +G +P+L ++PA+ G ++L + V+F ++L Q +RI Sbjct: 491 ESRVGLINNFRDGNVPVLISNPATLGESISLHQTVHDAVYFEYNFNLTFMLQSRDRIHRL 550 Query: 155 RQRQAGFKRAVFVYYLIAQNT------IDELVLQRLRTKSTIQDLLLNALKKETI 203 + R YYL+ + ID+ V +RL+ K I LNA+ + + Sbjct: 551 GLPDNQYTR---YYYLMTEGDHAHNGYIDQQVYERLKEKEIIM---LNAIDGDML 599 >gi|184155516|ref|YP_001843856.1| helicase [Lactobacillus fermentum IFO 3956] gi|183226860|dbj|BAG27376.1| helicase [Lactobacillus fermentum IFO 3956] gi|299783290|gb|ADJ41288.1| Helicase [Lactobacillus fermentum CECT 5716] Length = 630 Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 56/165 (33%), Gaps = 21/165 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDP 98 + K + +I+K + ++V F + Sbjct: 445 IEAPKFEMGIDLIDKLVSQGKKVLVWGMFVGTMQKITDTLNGMGIKTTLVYGATPKQDRE 504 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + G +L ++P + G ++L + V+F ++L Q +RI Sbjct: 505 GMINNFRTGDAQVLVSNPNTLGESISLHQTVHDAVYFEYNFNLTFMLQSRDRINRLGLPA 564 Query: 159 AGFKRAVFVYYLIAQ------NTIDELVLQRLRTKSTIQDLLLNA 197 + R YYL+ + ID +V ++L+ K + ++ Sbjct: 565 NQYTR---YYYLMTKGDVAHMGFIDRIVYKKLKDKEKVMLDAIDG 606 >gi|115402311|ref|XP_001217232.1| predicted protein [Aspergillus terreus NIH2624] gi|114189078|gb|EAU30778.1| predicted protein [Aspergillus terreus NIH2624] Length = 752 Score = 58.6 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 36/118 (30%), Gaps = 8/118 (6%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--KDPCTIQEWNEGKIPLLFAHPASCG 120 I + + + L G + IP+L + Sbjct: 640 IVFSAWTKTLDILCMKLEELGLNHVRIDGDVSRLDRTRRLHDFQTSPSIPILLMTYGTGA 699 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLNL N + W+ +E + R + G R V V +A+ T++E Sbjct: 700 VGLNLTA-ANRIHILEPQWNPS-----VEEQAIGRAVRLGQSREVTVVKYVAERTVEE 751 >gi|323140664|ref|ZP_08075586.1| putative phage head-tail adaptor [Phascolarctobacterium sp. YIT 12067] gi|322414849|gb|EFY05646.1| putative phage head-tail adaptor [Phascolarctobacterium sp. YIT 12067] Length = 1109 Score = 58.6 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 63/222 (28%), Gaps = 39/222 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE-------- 54 Y +++ + K ++ ++ D Sbjct: 732 AYESIVASAM----DKSVTTNTALEIIAKLRDISLFPDIGTIDERSISKEDAIKIFNSSA 787 Query: 55 --KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ------------GRTLDKDPCT 100 K+ E++ N I++ L+ + Sbjct: 788 RLKVTFSELVNTYYNNEKILIFIESKKMQRILRTVIQDFFKIKVPIPINGDMRGEIRQSI 847 Query: 101 IQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + +NE K +L P + G GLN+ N ++ S W+ + E R + Sbjct: 848 VDTFNESKGFGVLLLSPLAAGMGLNI-ASANHVIHLSRHWNPAK-----EDQATDRAYRI 901 Query: 160 GFKRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLLL 195 G + V V +A ++ D + + L K + + L Sbjct: 902 GQTKDVQVVIPMALHPVLRLDSFDNKLDELLEFKRQLSEEAL 943 >gi|330795379|ref|XP_003285751.1| hypothetical protein DICPUDRAFT_97160 [Dictyostelium purpureum] gi|325084299|gb|EGC37730.1| hypothetical protein DICPUDRAFT_97160 [Dictyostelium purpureum] Length = 1743 Score = 58.6 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 6/103 (5%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 Q I +L GLNL + + +E + R + Sbjct: 1632 AINQFRKNPNINVLLLPIQRGASGLNL-IEATHVFIVEPILNPS-----VEAQAINRVHR 1685 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + FV+ I +NTI+E V Q + K D L + K + Sbjct: 1686 FGQSKETFVHRFIIKNTIEEKVAQMNKKKEKELDWKLASNKND 1728 >gi|299741193|ref|XP_001834290.2| hypothetical protein CC1G_11203 [Coprinopsis cinerea okayama7#130] gi|298404599|gb|EAU87531.2| hypothetical protein CC1G_11203 [Coprinopsis cinerea okayama7#130] Length = 1028 Score = 58.6 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 20/174 (11%), Positives = 42/174 (24%), Gaps = 11/174 (6%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A N ++L+N ++ + + + Sbjct: 563 AANVFKYMSILIKLSNHLGLILPGSPRDSAEQQERNRELAQLAFPDGNVPMYGKVIIDPR 622 Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC---GHGLNLQYGGNILVFFSLW 138 + + +L + +LQ Sbjct: 623 YCGKWQALNILLKQWRA-------DPTNKVLIFTKSVRLLEMLEYHLQTQNYGFCKLDGS 675 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 EH + + R + G R V VY L+ +++EL+ R K + Sbjct: 676 TKQSEH-PAHDLQAMDRSYRFGQTRDVSVYRLLGAGSVEELIYARQIYKQQLMA 728 >gi|73748049|ref|YP_307288.1| helicase [Dehalococcoides sp. CBDB1] gi|73659765|emb|CAI82372.1| putative helicase (Snf2 family) [Dehalococcoides sp. CBDB1] Length = 1033 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 59/158 (37%), Gaps = 24/158 (15%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKA----------FPQ 90 E+ + E D K++AL+ +I I++ F LA + K Sbjct: 508 EKANSLETFDPKLEALKKVIRDKLTLPNNKIMLFSSFRHTLAYIYKNLIAEGYRVGLVHG 567 Query: 91 GRTLDKDPCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G ++ + E I +L GL+ Q+ + ++ + L W+ + Sbjct: 568 GTPDEERENIRDRFQLTGQDEKVIDVLLFS-EIGCEGLDYQF-CDCMINYDLPWNPMRIE 625 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 Q I RI Q+ V ++ ++ TID + +R Sbjct: 626 QRIGRIDRNGQK----SETVAIFNMVTPGTIDAEIYER 659 >gi|320449563|ref|YP_004201659.1| type III restriction enzyme subunit res [Thermus scotoductus SA-01] gi|320149732|gb|ADW21110.1| type III restriction enzyme, subunit res [Thermus scotoductus SA-01] Length = 1189 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 8/118 (6%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R G ++ + + ++ ++ +L A A+ G+NLQ +++V + L W Sbjct: 552 RPRAVVWIHGGMGREERSKAQEAFLHDPEVQVLVATDAAG-EGINLQR-AHLMVNYDLPW 609 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +Q RI + G ++ L+A T + V L K L Sbjct: 610 NPNRLEQRFGRI-----HRIGQTEPCHMWNLVAIETREGDVYHTLLRKLEEARKALGG 662 >gi|313895499|ref|ZP_07829055.1| conserved domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975625|gb|EFR41084.1| conserved domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 91 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 6/89 (6%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 A+ G G+ L ++ FFS+ + + + R + K Y++ Sbjct: 2 FVGQIAAAGLGITLIAAATMV-FFSMDYSMSNFE-----QAKARIHRVSQKENCHYIYIV 55 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKK 200 A T+D VL+ LR K+ + LL++ +K Sbjct: 56 AAGTVDRKVLKALRDKADLAKLLVDDYRK 84 >gi|241855293|ref|XP_002416013.1| conserved hypothetical protein [Ixodes scapularis] gi|215510227|gb|EEC19680.1| conserved hypothetical protein [Ixodes scapularis] Length = 675 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 62/196 (31%), Gaps = 14/196 (7%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS-ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 +K K + + ++Q E+I+ + + + + Sbjct: 445 IKTTDKVLQHMAKEMQNESIQGMQRRGVLLTYFRETGLHKCKAICKYLEDLLESD----- 499 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI--QEWNEGKIPLLFAHPA 117 + + A+ +I A D G+T + + + + Sbjct: 500 QKFLCFAHHQMVIDAVCELLDKKSCSHIRIDGKTSPELRKMLCDKFQYNDMCKVAVLSIT 559 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G+ L +++VF L+W+ R + G + V V YL+A+ T D Sbjct: 560 AANAGITL-SSASLVVFAELFWNPGILT-----QAEDRVHRIGQQNCVMVQYLVAKGTAD 613 Query: 178 ELVLQRLRTKSTIQDL 193 + + +R K Sbjct: 614 DYIWPLVRNKLDTLSK 629 >gi|76162997|gb|AAX30749.2| SJCHGC07413 protein [Schistosoma japonicum] Length = 70 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 6/69 (8%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I + G G+NL N ++ + W+ + R + G R V + Sbjct: 4 DIFVFLLTTRVGGLGVNLTS-ANRVLIYDPDWNPTT-----DLQARERAWRIGQSRDVVI 57 Query: 168 YYLIAQNTI 176 Y L+ T+ Sbjct: 58 YRLLTSGTV 66 >gi|325982657|ref|YP_004295059.1| helicase domain-containing protein [Nitrosomonas sp. AL212] gi|325532176|gb|ADZ26897.1| helicase domain protein [Nitrosomonas sp. AL212] Length = 934 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 9/108 (8%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++ +I ++ + G G+NLQ +I+V F L W+ Q + Sbjct: 559 HGSMSHEERAASIDQFETTGQ--FLVSTEAGGEGINLQRNCHIIVNFDLPWNPMRLVQRV 616 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R+ + G KR V V+ + A T+D ++Q L + I ++L+ Sbjct: 617 GRL-----YRYGQKRKVIVFNMHAPQTLDADIMQMLYFR--ISQVVLD 657 >gi|78190717|gb|ABB29680.1| SWI/SNF-related matrix-associated regulator of chromatin a5 [Leucosolenia sp. AR-2003] Length = 375 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 20/169 (11%), Positives = 53/169 (31%), Gaps = 32/169 (18%) Query: 6 KFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY--------DEEKHW 48 K QR Y + ++I+ N + ++ + N + Sbjct: 208 KMQRAWYTKILMKDIDVVNGAGKTDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDQH 267 Query: 49 KEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDK 96 + K+ L+ ++ K + +++ + ++ F + Sbjct: 268 IVDNSGKLCLLDKLLVRLKEQGSRVLIFSQMTRMMDIMEDYFMWRGHNYCRLDGSTPHED 327 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 +I E+N + + G G+NL ++++ F W+ + Sbjct: 328 RQVSINEFNMPNSEKFVFMLSTRAGGLGINL-ATADVVILFDSDWNPQV 375 >gi|317038672|ref|XP_001401946.2| SNF2 family helicase [Aspergillus niger CBS 513.88] Length = 1203 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 57/153 (37%), Gaps = 10/153 (6%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPL 111 E K ++II N L + + + + E + + + Sbjct: 899 SELHKTEKIIIFYDNNNAAFWIAEGLELLGVDFRIYASTLKPTMRAEYLALFRESEEVRV 958 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L HGL++ + + + Q +E + R + G R VFV L+ Sbjct: 959 LLMDLRQASHGLHI-ANASRVFIVNP-----IWQPNVESQAIKRAHRIGQTRPVFVETLV 1012 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 ++T+++ +L+R + + D ++ +++ + Sbjct: 1013 LKDTLEDKMLKR---RKAMTDSEIHHAERDLLD 1042 >gi|134074551|emb|CAK38844.1| unnamed protein product [Aspergillus niger] Length = 1237 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 57/153 (37%), Gaps = 10/153 (6%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPL 111 E K ++II N L + + + + E + + + Sbjct: 933 SELHKTEKIIIFYDNNNAAFWIAEGLELLGVDFRIYASTLKPTMRAEYLALFRESEEVRV 992 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L HGL++ + + + Q +E + R + G R VFV L+ Sbjct: 993 LLMDLRQASHGLHI-ANASRVFIVNP-----IWQPNVESQAIKRAHRIGQTRPVFVETLV 1046 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 ++T+++ +L+R + + D ++ +++ + Sbjct: 1047 LKDTLEDKMLKR---RKAMTDSEIHHAERDLLD 1076 >gi|328849920|gb|EGF99092.1| hypothetical protein MELLADRAFT_94926 [Melampsora larici-populina 98AG31] Length = 203 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 43/145 (29%), Gaps = 7/145 (4%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP- 98 Y + K+V K + +I + + T + Sbjct: 34 AYLVSQLQNKQVPLHKGLCKKTVIYTQWRCFMEWIKIGLDCHGIESGSLHGEMTPQERTL 93 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + N I + G GLN+ + + W+ + Q + Q Sbjct: 94 QLNRFQNNNNIEAFIVSIEAGGVGLNMT-CADEVYLMDAHWNPQIVQ-----QAIDHLHQ 147 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQR 183 G V VY+++A ++++ + Sbjct: 148 IGQTHPVKVYHVVAGGSVEQHLFNV 172 >gi|146329165|ref|YP_001209106.1| DEAD helicase domain-containing protein VrlO [Dichelobacter nodosus VCS1703A] gi|2317808|gb|AAC33384.1| putative DEAH ATP-dependent helicase [Dichelobacter nodosus] gi|146232635|gb|ABQ13613.1| DEAD helicase domain protein VrlO [Dichelobacter nodosus VCS1703A] Length = 965 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 73/207 (35%), Gaps = 33/207 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y +EL +L ++ A + + A E+ + I Sbjct: 436 ELYDMDGQELLDELLKSHVSALQSEGSHVETLL--------DAAVRCEQAGPDAKAEALI 487 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 + + + + N +++ F L++ +++ + Sbjct: 488 EWIYKLQAEENEPDLKVLIFTEFVPTQQMLKEFLEARGISVVTLNGSMAMEERGAAQDAF 547 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +L + G GLNLQ+ ++++ + + W+ +Q I R+ + G + Sbjct: 548 RKSH-RVLV-STDAGGEGLNLQF-AHVIINYDIPWNPMRLEQRIGRVD-----RIGQPKT 599 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQ 191 V + +++++ V + L K ++ Sbjct: 600 VQAINFVFEDSVEFRVREVLEQKLSVI 626 >gi|150389915|ref|YP_001319964.1| helicase domain-containing protein [Alkaliphilus metalliredigens QYMF] gi|149949777|gb|ABR48305.1| helicase domain protein [Alkaliphilus metalliredigens QYMF] Length = 856 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 53/148 (35%), Gaps = 5/148 (3%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 II I+ + + ++ + E K+ +L +P + Sbjct: 694 IIWCIFIDSILKLSSELQSKGLRVGSIYGSIEPKERELILKLFKEKKLDVLITNPHTLAE 753 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY-LIAQN----TI 176 ++L + +++ ++L Q +RI + + ++ + ++ ++ Sbjct: 754 SVSLHSACHNAIYYEYSYNLVHLLQSKDRIHRLGLPDNQYTQYYYLQNEFLTRDNEVFSL 813 Query: 177 DELVLQRLRTKSTIQDLLLNALKKETIH 204 D+ + +RL K I + K E ++ Sbjct: 814 DKKIYERLHEKERIMLQAIENNKLEQLN 841 >gi|108762887|ref|YP_632846.1| helicase/SNF2 domain-containing protein [Myxococcus xanthus DK 1622] gi|108466767|gb|ABF91952.1| helicase/SNF2 domain protein [Myxococcus xanthus DK 1622] Length = 907 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 9/106 (8%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T + ++E+ + +L + GLNLQ+ N++V + L W+ + +Q I R Sbjct: 477 TPEDRRALVEEFR-HRTQILICT-EAGAEGLNLQF-CNLVVNYDLPWNPQRVEQRIGRC- 532 Query: 153 VTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G +R V V + + N D + + L K + D + A Sbjct: 533 ----HRYGQQRDVLVINFLNRMNAADARLFELLEKKLNLFDGVFGA 574 >gi|257067735|ref|YP_003153990.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] gi|256558553|gb|ACU84400.1| DNA/RNA helicase, superfamily II, SNF2 family [Brachybacterium faecium DSM 4810] Length = 961 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + + E + + G+NLQ+ ++LV + L W+ + +Q I R+ Sbjct: 492 DRRKALVDYFREQGT--IMIATEAAAEGINLQF-CSMLVNYDLPWNPQRVEQRIGRV--- 545 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + I ++ +L+ L K + + A Sbjct: 546 --HRFGQKHNVVVVNFSNKGNIAEQRILELLTNKFQLFSSVFGA 587 >gi|210610634|ref|ZP_03288534.1| hypothetical protein CLONEX_00724 [Clostridium nexile DSM 1787] gi|210152356|gb|EEA83362.1| hypothetical protein CLONEX_00724 [Clostridium nexile DSM 1787] Length = 560 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T K + G++ +L G G N+Q L W + +Q Sbjct: 150 FIHEAGTETKKAELFAKVRSGQVRVLLGSTPKLGAGTNIQDRLIALHHLDCPWKPADLEQ 209 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V ++ + +NT D + Q L K ++ + Sbjct: 210 QEGRILR----QGNQNKKVKIFRYVTENTFDAYMWQILENKQKFISQIMTS 256 >gi|300112788|ref|YP_003759363.1| helicase domain-containing protein [Nitrosococcus watsonii C-113] gi|299538725|gb|ADJ27042.1| helicase domain protein [Nitrosococcus watsonii C-113] Length = 966 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 73/207 (35%), Gaps = 33/207 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y +EL +L ++ A + + A E+ + I Sbjct: 437 ELYDMDGQELLDELLKSHVSALQSEGSHVETLL--------DAAVRCEQAGPDAKAEALI 488 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 + + + + N +++ F L++ +++ + Sbjct: 489 EWIYELQAEENEPDLKVLIFTEFVPTQQMLKEFLEARGISVVTLNGSMDMEERKQAQDAF 548 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +L + G GLNLQ+ ++++ + + W+ +Q I R+ + G + Sbjct: 549 RKSH-RVLV-STDAGGEGLNLQF-AHVIINYDIPWNPMRLEQRIGRVD-----RIGQPKM 600 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQ 191 V + +++++ V + L K ++ Sbjct: 601 VRAISFVFEDSVEFRVREVLEQKLSVI 627 >gi|284053201|ref|ZP_06383411.1| helicase-like protein [Arthrospira platensis str. Paraca] Length = 1044 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 6/101 (5%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +G+I LL S GLNLQ G +L+ + L W+ +Q I R+ QR Sbjct: 800 KIKNLFRQGEIQLLLCT-ESASEGLNLQTCG-VLINYDLPWNPMRVEQRIGRVDRIGQR- 856 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V ++ L T++ V +RLR + + ++ L+ Sbjct: 857 ---YPTVKIHNLYYDGTVEAKVYRRLRERIGLFTNVVGNLQ 894 >gi|146095356|ref|XP_001467556.1| helicase [Leishmania infantum JPCM5] gi|134071921|emb|CAM70616.1| helicase-like protein [Leishmania infantum JPCM5] Length = 908 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 7/92 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + L + G GLNL G + ++ ++ + V R + G + V Sbjct: 739 QPGVFLFLISTRAGGTGLNLT-GADTVILLDGDFNP-----HNDLQAVDRCHRIGQRNPV 792 Query: 166 FVYYLIAQNTID-ELVLQRLRTKSTIQDLLLN 196 +Y L++ +T++ E + K ++ L+L Sbjct: 793 ALYRLVSPHTVEDERHSGIVDRKLKLEHLVLG 824 >gi|121607110|ref|YP_994917.1| helicase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121551750|gb|ABM55899.1| helicase domain protein [Verminephrobacter eiseniae EF01-2] Length = 443 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 7/112 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G K + + +L A+ G+NLQ+ IL F L W+ + +Q I R Sbjct: 23 GDHGAKVAAERRFRQKDGPRVLICT-AAGREGINLQF-ARILFNFDLPWNPMDVEQRIGR 80 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 I + G VY + +TI+ + L K + + Sbjct: 81 I-----HRYGQNHTAQVYNFVLSDTIEGRIFLMLDEKLVEIARTVGKVDDRG 127 >gi|291568725|dbj|BAI90997.1| putative helicase [Arthrospira platensis NIES-39] Length = 1044 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 6/101 (5%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +G+I LL S GLNLQ G +L+ + L W+ +Q I R+ QR Sbjct: 800 KIKNLFRQGEIQLLLCT-ESASEGLNLQTCG-VLINYDLPWNPMRVEQRIGRVDRIGQR- 856 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V ++ L T++ V +RLR + + ++ L+ Sbjct: 857 ---YPTVKIHNLYYDGTVEAKVYRRLRERIGLFTNVVGNLQ 894 >gi|261417435|ref|YP_003251118.1| SNF2-related protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373891|gb|ACX76636.1| SNF2-related protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326640|gb|ADL25841.1| SNF2/helicase/endonuclease domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 1045 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 24/213 (11%), Positives = 63/213 (29%), Gaps = 35/213 (16%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIE 64 + + + ++++ ++ V K+ A I+E Sbjct: 671 RYVAAINLGIKTHAHPFERIQSLRKISDHPYLDFKDVDHLSVDDLIRSSAKLSATMRILE 730 Query: 65 KA--NAAPIIVAYHFNSDLARLQKA------------------FPQGRTLDKDPCTIQEW 104 +I+ Q+ +G + + Sbjct: 731 DIRAKNEKVIIFTDRRDMQRMFQRILLQKFGIEASVINGDTSTSDRGNKVSRQKTVDIFQ 790 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ + G GLN G N ++ +S W+ + R + G + Sbjct: 791 EKSGFNVIIMSQLAAGVGLN-VVGANHVIHYSRHWNPAKEM-----QATDRVYRIGQTKD 844 Query: 165 VFVYYLIAQ----NTIDELVLQRLRTKSTIQDL 193 V+V++ +A ++ D ++ L+ K+ + Sbjct: 845 VYVHFPMAVCDNFDSFDVVLDALLQNKTHLASA 877 >gi|224054730|ref|XP_002191300.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Taeniopygia guttata] Length = 963 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 57/164 (34%), Gaps = 19/164 (11%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKA 87 G + Y ++H ++ + ++E N +V H L Sbjct: 720 GLLVYFSRTAEAKIHS-VVEYILELLESGNN-KFLVFAHHKIMLDAVAAELKKKHIEHIR 777 Query: 88 FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + Q++ K + + GL L +++VF L+W+ Sbjct: 778 IDGSTSSAERQSLCQKFQLAEKHAVAVLSLTAANMGLTLCA-ADLVVFAELFWNPGILI- 835 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V V+YL+A+ T D+ + ++ K + Sbjct: 836 ----QAEDRAHRIGQTSSVNVHYLVAKGTADDYLWPMIQEKIKV 875 >gi|195161250|ref|XP_002021481.1| GL26533 [Drosophila persimilis] gi|194103281|gb|EDW25324.1| GL26533 [Drosophila persimilis] Length = 747 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 6/112 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + Q R+ + N+ + +C G+ L ++VF L W+ Sbjct: 553 HHIRIDGQTRSDLRADMVSAFQNKSSCRVAVLSLKACNAGITLTA-AELIVFAELDWNPS 611 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +R + G + V YL+A T D+ + + L K + + Sbjct: 612 TL-----AQAESRAHRIGQTKTVICRYLLANETADDTIWKMLINKQKVLSKV 658 >gi|256378169|ref|YP_003101829.1| helicase domain protein [Actinosynnema mirum DSM 43827] gi|255922472|gb|ACU37983.1| helicase domain protein [Actinosynnema mirum DSM 43827] Length = 1131 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 8/106 (7%) Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + +E+ +L A A+ GLNLQ +++V + L W+ +Q Sbjct: 531 HGGVNRFRRREITEEFTANPACRVLLATDAAG-EGLNLQA-AHMVVNYDLPWNPNRIEQR 588 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ + G ++ L+A T + V L K Q Sbjct: 589 FGRV-----HRIGQTEVCRLWNLVAVGTREGEVFATLLRKVEEQRK 629 >gi|303241443|ref|ZP_07327946.1| N-6 DNA methylase [Acetivibrio cellulolyticus CD2] gi|302591052|gb|EFL60797.1| N-6 DNA methylase [Acetivibrio cellulolyticus CD2] Length = 2215 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 36/109 (33%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ + G++ +L + G G N+Q + W + +Q Sbjct: 1841 FVHDAKTDEQRETLFERVRAGEVRILLGSTSKLGTGTNVQNKLIAVHHLDCPWRPSDIEQ 1900 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI Q V ++ + + T D + Q K ++ Sbjct: 1901 RDGRILR----QGNENPVVNIFRYVTKGTFDAYLWQIQEQKLKYISQVM 1945 >gi|330797634|ref|XP_003286864.1| hypothetical protein DICPUDRAFT_31594 [Dictyostelium purpureum] gi|325083166|gb|EGC36626.1| hypothetical protein DICPUDRAFT_31594 [Dictyostelium purpureum] Length = 534 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 6/97 (6%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +++ + K + + G GL L ++F L W Sbjct: 441 QNRNELVNHFQSNPKCRIAVLSITAAGTGLTLTA-ATCVIFAELLWTPGVLF-----QAE 494 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V V YLI T+DE + + +K + Sbjct: 495 DRAHRYGQTSSVLVQYLIGMGTVDESIWNLVESKKNL 531 >gi|154340832|ref|XP_001566369.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063692|emb|CAM39877.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1591 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 6/99 (6%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 C + + +L + G G+ L + + + W+ + + R Sbjct: 550 RCIAELQSNDACRVLLCSVRAGGVGIKLTA-ASHCILLDVSWNPTD-----DVQATYRLY 603 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G R V VY L T + +V ++ +Q + + Sbjct: 604 RYGQLRPVNVYRLATWGTSEHVVFAYALQRAWLQKKIAD 642 >gi|115391319|ref|XP_001213164.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114194088|gb|EAU35788.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1339 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 21/201 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 F++ L+ L E+ A A ++H E ++II Sbjct: 896 KTFKKNLFKTLPQESPLAQTKLVA-------TASAKLTYLLDQVDQLHKE----EKIIIF 944 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGL 123 N L + + ++ + E + +L HGL Sbjct: 945 YDNNNSAYWIAEGLELLGIDFRIYANTLKPALRTAYLKLFRESEDVRVLLMDLRQASHGL 1004 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 ++ + + + Q +E + R + G +R VFV L+ ++T+++ + Sbjct: 1005 HI-ANASRVFIVNP-----IWQPNVESQAIKRAHRIGQRRPVFVETLVLKDTLEDKM--- 1055 Query: 184 LRTKSTIQDLLLNALKKETIH 204 L + + D+ + +K+ + Sbjct: 1056 LTRRKAMSDMEIQRAEKDLLD 1076 >gi|282600669|ref|ZP_05979374.2| SNF2 family protein [Subdoligranulum variabile DSM 15176] gi|282571763|gb|EFB77298.1| SNF2 family protein [Subdoligranulum variabile DSM 15176] Length = 2992 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L W + Q Sbjct: 2608 FIHEANTEVRKKELFSKVRTGQVRVLLGSTQKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 2667 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + K ++ + Sbjct: 2668 RKGRIER----QGNQNETVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 2714 >gi|241601346|ref|XP_002405286.1| smarca4, putative [Ixodes scapularis] gi|215502512|gb|EEC12006.1| smarca4, putative [Ixodes scapularis] Length = 483 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 48/156 (30%), Gaps = 17/156 (10%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 K + L+ I+ K +++ + + ++ T + G P Sbjct: 115 SGKFELLDRILPKLRCKGHRVLLFCQMTTLMTIMEDYLTY------RGATFPFADAGCRP 168 Query: 111 LLFAHPASCGHGLN---LQYGGNILVFFSLWWD------LEEHQQMIERIGVTRQRQAGF 161 L G L+ S+ + + R + G Sbjct: 169 RCLGGRLEDRRKHRYFVLTSRGLQLLLLSVPSSDSVLCLPASAKLCCDLQAQDRAHRIGQ 228 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K V V L+ N+++E +L + K + + ++ A Sbjct: 229 KNEVRVLRLVTVNSVEERILAAAKYKLNLDEKVIQA 264 >gi|328542136|ref|YP_004302245.1| Prophage LambdaMc01, helicase, SNF2 family [Polymorphum gilvum SL003B-26A1] gi|326411886|gb|ADZ68949.1| Prophage LambdaMc01, helicase, SNF2 family [Polymorphum gilvum SL003B-26A1] Length = 922 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G + + P + A+ G+NLQ+ IL F L W+ + +Q I R Sbjct: 553 GGDHGAKAAAERRFKLKDGPRVLVCTAAGREGINLQF-ARILFNFDLPWNPMDMEQRIGR 611 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 I + G VY L+ +TI+ + L K T L + + Sbjct: 612 I-----HRYGQAHTAQVYNLVLSDTIEGRIFLLLDDKLTEIARTLGKVDDQG 658 >gi|322500668|emb|CBZ35745.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1581 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 8/109 (7%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 C + + +L + G G+ L + + + W+ + + R Sbjct: 547 RCISELQSNDTCRVLLCSVRAGGVGIKLTA-ASHCILLDVSWNPTD-----DVQATYRLY 600 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--LNALKKETIH 204 + G R V +Y L T + +V +S +Q + ++ +++ H Sbjct: 601 RYGQLRPVNIYRLATWGTSEHIVFAYALQRSWLQKKIADISDPRRQQRH 649 >gi|294676842|ref|YP_003577457.1| SNF2 family helicase [Rhodobacter capsulatus SB 1003] gi|294475662|gb|ADE85050.1| helicase, SNF2 family [Rhodobacter capsulatus SB 1003] Length = 412 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 38/220 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-DEKIKALE 60 + Y L A + ++ + + ++ A Sbjct: 148 QVYDA----ARLQLASGTPGA--ALKLLHHIRTVSVRPALGSLSADAEFIAASARLAATF 201 Query: 61 VIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLDK------------DPCTIQEWNE 106 I+ + +V R + LD+ + + Sbjct: 202 DILRQIRAKGERALVFIEHRQMQYRFIEIARAEFGLDRIDLINGETPIAQRQQIVNRFQA 261 Query: 107 -----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 G LL P + G GL L ++ S WW+ +Q +R+ + G Sbjct: 262 HLEQGGGFDLLVLGPKAAGTGLTLTA-ATHVIHLSRWWNPAAEEQCNDRV-----HRLGQ 315 Query: 162 KRAVFVYYLIA------QNTIDELVLQRLRTKSTIQDLLL 195 R V ++ +A ++ D L+ ++ K + L Sbjct: 316 TRPVQIHVPMAIHPGYRAHSFDCLLHSLMQRKRRMASAAL 355 >gi|224001070|ref|XP_002290207.1| Hypothetical protein THAPSDRAFT_262487 [Thalassiosira pseudonana CCMP1335] gi|220973629|gb|EED91959.1| Hypothetical protein THAPSDRAFT_262487 [Thalassiosira pseudonana CCMP1335] Length = 466 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 39/113 (34%), Gaps = 6/113 (5%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 +F R + + + + + + + G + L + + F Sbjct: 354 SNFVGSNTRFIRIDGATNPKTRQEQILTFQTDPTVRIAMLGITAAGVAVTLTA-SSTVWF 412 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 L+W I R + G + V Y +A++T+DE++ + + K Sbjct: 413 AELFWTPA-----IMIQAEDRCHRIGQQARVRCLYFVAKSTLDEVLWKLIEKK 460 >gi|58265946|ref|XP_570129.1| hypothetical protein CND04260 [Cryptococcus neoformans var. neoformans JEC21] gi|57226362|gb|AAW42822.1| hypothetical protein CND04260 [Cryptococcus neoformans var. neoformans JEC21] Length = 1112 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 65/197 (32%), Gaps = 26/197 (13%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----------DEKIKALEVIIEK--ANA 68 A + + ++ ++ E ++ K++ L++++ K A Sbjct: 7 AKSVRNILMELRKVCQHPYLSAPELEIFDLPLEEQHRQLLNASGKLQFLKLLLPKLIARG 66 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL---LFAHPASCGHGLNL 125 I++ + L G +I + + F G Sbjct: 67 HRILLFSQISYMAKMLSTCALTGIPSKHKGKSIWTNSMRLTQIIIYFFLQQELGAWGSIW 126 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 F++ I +R + G ++ V V+ L+ + +++E ++ + + Sbjct: 127 --PPQTQSFYTTPIS--------ILIRTSRAYRYGQEKRVLVFKLMIKGSVEETIINKGK 176 Query: 186 TKSTIQDLLLNALKKET 202 K + L++ + KET Sbjct: 177 RKMVLDHLVVQQMGKET 193 >gi|238506885|ref|XP_002384644.1| helicase, putative [Aspergillus flavus NRRL3357] gi|220689357|gb|EED45708.1| helicase, putative [Aspergillus flavus NRRL3357] Length = 602 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 42/104 (40%), Gaps = 6/104 (5%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + +E ++ +L A + G GL++ N + LWW+ Q Sbjct: 471 QAREQSMDKFRDEKEVRILIASLKAGGIGLDM-SMANKCILVDLWWNEAIQQ-----QAF 524 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V +I +++IDE +L+ K+ + Sbjct: 525 CRLYRIGQSKDVEFVKIIIKDSIDEYLLKMQTRKTANISGTMGD 568 >gi|67678171|gb|AAH96935.1| Wu:fd12d03 protein [Danio rerio] Length = 479 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++ + W+ + +R + G + V +Y + + +++E + Q + K Sbjct: 2 ADTVIIYGSDWNP-----HNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKM 56 Query: 189 TIQDLLL 195 + L++ Sbjct: 57 MLTHLVV 63 >gi|88811243|ref|ZP_01126499.1| Type III restriction enzyme, res subunit [Nitrococcus mobilis Nb-231] gi|88791782|gb|EAR22893.1| Type III restriction enzyme, res subunit [Nitrococcus mobilis Nb-231] Length = 940 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 63/200 (31%), Gaps = 35/200 (17%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 + QG + +A K Q N +I Sbjct: 455 TEHQGTDAKAETLLELIYKLQQEENDPQLKV------------------LIFTEFVPTQA 496 Query: 73 VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + F G LD Q + +L + G GLNLQ+ +++ Sbjct: 497 MLAEFLESRGFSIALLNGGMDLDARTRAQQVF-SRDARVLI-STDAGGEGLNLQF-CHVI 553 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI-- 190 V F + W+ +Q I R+ + G V + ++T++ V + L K ++ Sbjct: 554 VNFDMPWNPMRLEQRIGRVD-----RIGQPHVVRAINFVLEDTVEHRVREVLGEKLSVIA 608 Query: 191 -------QDLLLNALKKETI 203 ++++ + E I Sbjct: 609 QEFGVDKAADVMDSAEVEPI 628 >gi|306836192|ref|ZP_07469176.1| helicase [Corynebacterium accolens ATCC 49726] gi|304567913|gb|EFM43494.1| helicase [Corynebacterium accolens ATCC 49726] Length = 997 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 9/107 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + D+ + + E + + G+NLQ+ ++L+ + L W+ + +Q I RI Sbjct: 525 PSADRRKALVDYFRESGS--IMIATEAASEGINLQF-CSMLINYDLPWNPQRVEQRIGRI 581 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V + + + +L+ L K + D + A Sbjct: 582 -----HRYGQKHDVVIVNFFNEGNAAEARILELLENKFHLFDSVFGA 623 >gi|326526795|dbj|BAK00786.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 949 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 7/99 (7%) Query: 93 TLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ ++N +LF +CG G++L G + +V + + R Sbjct: 810 SQEERELATDQFNNSADAKVLFGSIRACGEGISL-VGASRVVILDVHLNPSVT-----RQ 863 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G ++ VFVY L+A ++ +E Q K I Sbjct: 864 AIGRAFRPGQQKKVFVYRLVAADSQEESFHQTAFKKEVI 902 >gi|195337877|ref|XP_002035552.1| GM14768 [Drosophila sechellia] gi|194128645|gb|EDW50688.1| GM14768 [Drosophila sechellia] Length = 1208 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 24/174 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTLDKDPCT 100 K KI ++ ++ K IIV + + L + +A ++ CT Sbjct: 1034 HKSIIGDFSTKIASIVELVLKIKGENEQEKIIVFSQWQAILIEIARALSLNGIQFRNKCT 1093 Query: 101 IQEWNE-----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +++++ + L + GLNL + + + ER + R Sbjct: 1094 NKDFDDFKNPYSNVTCLLMPLSKGSKGLNL-IEATHVFLVEPILNPGD-----ERQAIGR 1147 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRT---------KSTIQDLLLNALKK 200 + G KR V+ I T++E +L + + ++++ L++LKK Sbjct: 1148 IHRFGQKRPTKVHRFIVNGTVEENILSLITSADDTTTLGTHWDLENMTLDSLKK 1201 >gi|312901374|ref|ZP_07760654.1| protein, SNF2 family [Enterococcus faecalis TX0470] gi|311291537|gb|EFQ70093.1| protein, SNF2 family [Enterococcus faecalis TX0470] Length = 404 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 58/138 (42%), Gaps = 11/138 (7%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT-----IQEWNEGKIPLLFAHP 116 ++ + + II+ Y++ ++ L++ + + Q W K + F Sbjct: 258 MLCEGTESNIIIFYYYQKEIEALKEKIKNKTFFEVNGKHSNLPPKQSWKSLKNSVTFVQY 317 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G+ LQY N ++F++ + +++ + R + G + V VY I Q TI Sbjct: 318 MAGSAGIELQY-ANTVIFYTPTYSYQDYS-----QALGRAYRNGQTKKVTVYRFITQQTI 371 Query: 177 DELVLQRLRTKSTIQDLL 194 ++ V Q L K + L Sbjct: 372 EQAVYQALENKEDFSEEL 389 >gi|307209215|gb|EFN86322.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Harpegnathos saltator] Length = 670 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 44/116 (37%), Gaps = 6/116 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 S + + + + + + + G+ L +++VF L+ Sbjct: 482 SMNIQYIRIDGKTTSEQRKYQIDKFQEHDDYLAAVLSITAANAGITLTA-AHLVVFTELF 540 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W+ Q +R+ + G V + YL+A++T D+ + ++ K I + + Sbjct: 541 WNPGILCQAEDRV-----HRIGQNDNVIIQYLVAKDTADDYMWPLIKKKMDILNAV 591 >gi|320592310|gb|EFX04749.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 1567 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 52/126 (41%), Gaps = 7/126 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 I+ + L + +G T ++ ++ +N + +L + Sbjct: 1358 IVFYDSENVAFYLAEHLEMLQVHHLIYARGITAERRAQYVETFNGNARFRVLLMDLSQAA 1417 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GL++ + + F + + +E + R R+ +R V V L+ +++++EL+ Sbjct: 1418 FGLDM-RSASRIYFIGPVLNPQ-----VEAQAIGRVRRISQQRQVSVETLVLRDSVEELI 1471 Query: 181 LQRLRT 186 ++R R+ Sbjct: 1472 VERRRS 1477 >gi|254425780|ref|ZP_05039497.1| Helicase conserved C-terminal domain protein [Synechococcus sp. PCC 7335] gi|196188203|gb|EDX83168.1| Helicase conserved C-terminal domain protein [Synechococcus sp. PCC 7335] Length = 1117 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 9/115 (7%) Query: 88 FPQGRTLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 F G ++ +N + +L A + G+NLQ L F + W+ Sbjct: 595 FHGGIGDERREQVKAAFNADPAAHPLRILIAT-DAAREGVNLQNYCANLFHFDVPWNPSR 653 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +Q RI Q+ V YY + ++ VL L K+ L +L Sbjct: 654 MEQRNGRIDRKLQKADL----VRCYYFVYSQRAEDRVLDVLVQKTKRIQEELGSL 704 >gi|257893695|ref|ZP_05673348.1| helicase [Enterococcus faecium 1,231,408] gi|257830074|gb|EEV56681.1| helicase [Enterococcus faecium 1,231,408] Length = 620 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 65/171 (38%), Gaps = 25/171 (14%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCT 100 K KA +I+K + IV F +L + ++D+ Sbjct: 440 SSKTKATIELIKKLVSENKKTIVWCIFISSIELLENKCEELGLSAISIYGETSMDERLKL 499 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 I+E+ +G+ +L +P + ++L + +++ ++L Q +RI Sbjct: 500 IKEFQKGQYDILITNPHTLAESVSLHQVCHDAIYYEYSFNLVHLLQSKDRIHRLG---LA 556 Query: 161 FKRAVFVYYLIAQN-------TIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + YY+ ++ ++D+ + RL K I L+A+ + + Sbjct: 557 DNQYTQYYYMQSKYIYNEQVYSLDDRIYHRLMEKEKIM---LDAIDHDILE 604 >gi|134058188|emb|CAK38380.1| unnamed protein product [Aspergillus niger] Length = 961 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 53/162 (32%), Gaps = 11/162 (6%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 + + DEK + +I ++A + ++ + + Sbjct: 718 ALLRNITKSRSISDEKGVQTKFVIFSYWTKMLDLIATALTENHLTFRRIDGRSSLSQRKE 777 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + ++ A + G G++L N + W+ M E + R + Sbjct: 778 ALGVFGSDPQCIIMLASIGAAGEGIDLTA-ANSIHIVEPQWNP-----MAEAQAIDRVHR 831 Query: 159 AGFKRAVFVYYLIAQNTID----ELVLQRLRTKSTIQDLLLN 196 G +R V V I +I+ + V K + + L+ Sbjct: 832 IGQERDVEVVRYITSESIESEAIQYVQWIQSDKLRLINKALS 873 >gi|146092861|ref|XP_001466542.1| hypothetical protein [Leishmania infantum] gi|134070905|emb|CAM69581.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 1581 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 8/109 (7%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 C + + +L + G G+ L + + + W+ + + R Sbjct: 547 RCISELQSNDACRVLLCSVRAGGVGIKLTA-ASHCILLDVSWNPTD-----DVQATYRLY 600 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--LNALKKETIH 204 + G R V +Y L T + +V +S +Q + ++ +++ H Sbjct: 601 RYGQLRPVNIYRLATWGTSEHIVFAYALQRSWLQKKIADISDPRRQQRH 649 >gi|328862456|gb|EGG11557.1| hypothetical protein MELLADRAFT_91139 [Melampsora larici-populina 98AG31] Length = 152 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 45/105 (42%), Gaps = 6/105 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +T + + N KI + G GLN+ + + W+ + QQ I+R Sbjct: 18 MKTQQRTWQLTRFQNNIKIEAFIVSIEAGGVGLNMT-CADEVYLMDAHWNPQIVQQAIDR 76 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + Q G V VY+++A ++++ + + ++++ ++ Sbjct: 77 L-----HQIGQTHPVKVYHVVAGESVEQHLFNVQKKEASLARKVI 116 >gi|258567350|ref|XP_002584419.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237905865|gb|EEP80266.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 1216 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 51/143 (35%), Gaps = 9/143 (6%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I + N VA + + K N ++ +L H Sbjct: 937 IFYENNNNAFWVAEGLEILGVEFRIYASTLKPNLKSEYLSMFNNSEEVRVLLMDLRQASH 996 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GL+ + + + WD IE + R + R V+V L+ +NT+++ +L Sbjct: 997 GLH-VASASRIFIINPIWDP-----NIESQAIKRAHRISQTRPVYVETLVLRNTLEDKML 1050 Query: 182 QRLRTKSTIQDLLLNALKKETIH 204 +R + + + + +++ + Sbjct: 1051 RR---RKQMSNAEMQHAERDLLD 1070 >gi|168206971|ref|ZP_02632976.1| superfamily II DNA and RNA helicase [Clostridium perfringens E str. JGS1987] gi|170661641|gb|EDT14324.1| superfamily II DNA and RNA helicase [Clostridium perfringens E str. JGS1987] Length = 1975 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 34/112 (30%), Gaps = 4/112 (3%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + + + G ++ G G N+Q L + + + Sbjct: 1619 CFIHDAKNEIQREKIFSDMRNGNKRIIIGSTQKMGTGTNIQDRLVSLHHLDCPYRPADLE 1678 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q RI Q + V +Y +NT D + Q + K ++ + Sbjct: 1679 QREGRIIR----QGNMNKEVNIYRYATKNTFDSYLWQIVEQKQKFISQVMTS 1726 >gi|313902234|ref|ZP_07835641.1| helicase domain protein [Thermaerobacter subterraneus DSM 13965] gi|313467514|gb|EFR63021.1| helicase domain protein [Thermaerobacter subterraneus DSM 13965] Length = 1205 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 64/202 (31%), Gaps = 28/202 (13%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 + +L+ E + ++ Q ++ W+E+ + + + Sbjct: 478 QTIAELRAEIETLKELEALALRVRQ-------SGTDRKWEELSKILQDREVMFDARGHRR 530 Query: 70 PIIVAYHFNSDLARLQKAFPQ--------------GRTLDKDPCTIQEWNEGKIPLLFAH 115 +++ L ++ + + +L A Sbjct: 531 KLVIFTEHRDTARYLAWRIQTLLGRPEAVVVIEGTMGREERRKAQELFTQDPNVHVLVAT 590 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 A+ G+NLQ +++V + L W+ +Q RI + G ++ L+AQNT Sbjct: 591 DAAG-EGINLQR-AHLMVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWNLVAQNT 643 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 + V L K + L Sbjct: 644 REGEVYLALLRKLEAEQRALGG 665 >gi|171060838|ref|YP_001793187.1| helicase domain-containing protein [Leptothrix cholodnii SP-6] gi|170778283|gb|ACB36422.1| helicase domain protein [Leptothrix cholodnii SP-6] Length = 947 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 9/108 (8%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 RT D ++ + + ++ A + G+NLQ+ ++++ + L W+ + +Q I R Sbjct: 478 SRTADTRAALVEHFRDSA-QIMIAT-EAGAEGINLQF-CSLVINYDLPWNPQRIEQRIGR 534 Query: 151 IGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V I N D+ V + L K + + + A Sbjct: 535 C-----HRYGQQHDVVVVNFIDLSNPADQRVYELLAQKFQLFEGVFGA 577 >gi|219883019|ref|YP_002478183.1| helicase domain protein [Arthrobacter chlorophenolicus A6] gi|219862025|gb|ACL42366.1| helicase domain protein [Arthrobacter chlorophenolicus A6] Length = 762 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 6/105 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G K + G+I ++F + G G+ L + + F W Sbjct: 605 GVAQHKRQAVADKLQNGEIGVIFCSIGAAGFGITLTASSDTI-FIETDWTPANIS----- 658 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R + G V L+A NT+D + LR K+ D+++ Sbjct: 659 QAEDRNNRIGQLNTCMVTTLLATNTLDAHMRAILRNKAKDLDVMM 703 >gi|317145894|ref|XP_003189752.1| hypothetical protein AOR_1_1066144 [Aspergillus oryzae RIB40] Length = 181 Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 64/171 (37%), Gaps = 12/171 (7%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 Q+ ++ + + II + + + F +D Sbjct: 8 QILKQFNQASKQLERVFFPNAGWPYVSDII---SHYIVGYLFGFKNDFLDFCVLCLCMFA 64 Query: 94 LDKDPCTIQE-WNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ ++E + G L G G+NLQ G++++ +WW++ ER Sbjct: 65 RHRNESAVREEFTNGTSSAPLLVTAGCGGTGINLQS-GSVIIQMEVWWNMNH-----ERQ 118 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLLNALKKE 201 R + G + V VY L A+N+ ID ++ + K + ++ L ++ Sbjct: 119 AYARCLRQGQDKMVKVYKLFAENSNIDIMISKCQVRKDKLNSQVMKPLVRK 169 >gi|195437364|ref|XP_002066610.1| GK24475 [Drosophila willistoni] gi|194162695|gb|EDW77596.1| GK24475 [Drosophila willistoni] Length = 734 Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 7/117 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 S L D ++ + + + +C G+ L +++F L Sbjct: 543 STLKVHYIRIDGSTRSDLRADFVETFQKKSSCQVAVLSLKACNSGITLTA-AEMIIFAEL 601 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W+ +R + G + V YL+A T D+ + L+ K + + Sbjct: 602 DWNPSTL-----AQAESRAHRIGQTKPVICRYLMAHQTADDTIWNMLKAKQDVLSKV 653 >gi|147773526|emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera] Length = 1187 Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ +++ +N + F +CG G++L G + ++ + + R Sbjct: 991 SSEQREWSMERFNTSPDARVFFGSIKACGEGISL-VGASRVLILDVHLNPSVT-----RQ 1044 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + R + G K+ V VY L+A ++ +E K I + Sbjct: 1045 AIGRAFRPGQKKKVHVYKLVAADSPEEEDHNSCFKKELISKM 1086 >gi|198465924|ref|XP_001353822.2| GA20306 [Drosophila pseudoobscura pseudoobscura] gi|198150371|gb|EAL29557.2| GA20306 [Drosophila pseudoobscura pseudoobscura] Length = 1259 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 23/180 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 +V K KI + +I N A I++ + + L ++ A R Sbjct: 1080 HSVRPGVAKTMVGSFSTKITCIVQLILKITADDNQAKILIFSQWQAILEQISIALRLNRI 1139 Query: 94 LDKD--PCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + + E+ ++ + L + GLNL + + + E Sbjct: 1140 VFRKCSNMDLDEFKSTEMNVTCLLMALSRGSKGLNL-IEATHVFLVEPILNPGD-----E 1193 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR----TK-----STIQDLLLNALKK 200 R + R + G +A V+ I TI+E +L + +K +++L L++LKK Sbjct: 1194 RQAIGRIHRFGQTKATTVHRFIVNGTIEENILSLISSADDSKTLGTHWDLENLTLDSLKK 1253 >gi|152982150|ref|YP_001354424.1| ATP-dependent RNA helicase [Janthinobacterium sp. Marseille] gi|151282227|gb|ABR90637.1| ATP-dependent RNA helicase [Janthinobacterium sp. Marseille] Length = 1173 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 8/112 (7%) Query: 87 AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G ++ + + N+ +L A A+ G+NLQ N++V + L W+ + Sbjct: 536 MIHGGIKREERRKVQELFRNDPATRVLLATDAAG-EGVNLQN-ANLMVNYDLPWNPNRLE 593 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q RI + G ++ ++A T + V QRL K ++ L Sbjct: 594 QRFGRI-----HRIGQTEVCHLWNMVAAETREGDVFQRLFEKLEVEREALGG 640 >gi|261199876|ref|XP_002626339.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] gi|239594547|gb|EEQ77128.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] Length = 1214 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 9/144 (6%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAH 115 + ++II L + + + +NE + +L Sbjct: 935 EQEKIIIFYEGNNTGFYIAEGLEILGVEFRIYANTLKTQTRSEYLSLFNETETVRVLLMD 994 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 HGL++ + + + WD IE + R + + V+V L+ + T Sbjct: 995 LRQASHGLHI-ACASRVFIVNPIWDP-----NIESQAIKRAHRISQTKPVYVETLVLKGT 1048 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 +++ +L+R K L +A K Sbjct: 1049 LEDRMLRR--RKQMSTAELRHAEK 1070 >gi|323933991|gb|EGB30458.1| hypothetical protein ERCG_04599 [Escherichia coli E1520] Length = 952 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 16/198 (8%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHW-----------KEVHDEKIKALEVIIE 64 +G+ I + ++ K ++ A+ + K K K + Sbjct: 425 EGKQIIFTDEKTQHQKLKRIICNALNLEPSKVRILNAQTVAEAGKTGKKLKAVKPPKELP 484 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 I Y+ L A +L ++ EG+ P++ + G+N Sbjct: 485 DEPTDAQIAKYNEQMALYDAYIAQQNEMSLGGLEKIAADFQEGRTPIIICN-KKAEVGIN 543 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G + +L W Q R +A V V+Y + + DE L+ L Sbjct: 544 LHRGTTDIHHLTLPWTPASVAQRNGRGARVGSNRAS----VRVHYYCGKGSFDEYRLKTL 599 Query: 185 RTKSTIQDLLLNALKKET 202 + K+ +L + K E Sbjct: 600 KRKAGWISDILRSDKSEM 617 >gi|323447772|gb|EGB03682.1| hypothetical protein AURANDRAFT_8383 [Aureococcus anophagefferens] Length = 88 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 8/77 (10%) Query: 96 KDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++ + + + + G+NL N +V F W+ I+R + Sbjct: 18 ERQKMVEAFEADGARARVFLLSTKAGNMGINLVA-ANRVVLFDACWNPA-----IDRQAL 71 Query: 154 TRQRQAGFKRAVFVYYL 170 R + G + V++Y L Sbjct: 72 FRCFRYGQTKHVYIYRL 88 >gi|327350451|gb|EGE79308.1| SNF2 family helicase [Ajellomyces dermatitidis ATCC 18188] Length = 1214 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 54/153 (35%), Gaps = 17/153 (11%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAH 115 + ++II L+ + + + +NE + +L Sbjct: 935 EQEKIIIFYEGNNTGFYIAEGLEILSVEFRIYANTLKTQTRSEYLSLFNETETVRVLLMD 994 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 HGL++ + + + WD IE + R + + V+V L+ + T Sbjct: 995 LRQASHGLHI-ACASRVFIVNPIWDP-----NIESQAIKRAHRISQTKPVYVETLVLKGT 1048 Query: 176 IDELVLQRLRT----------KSTIQDLLLNAL 198 +++ +L+R + K + D ++++ Sbjct: 1049 LEDRMLRRRKQMSTTELRHAEKDPLDDQTMSSI 1081 >gi|16197925|gb|AAL13727.1| LD03886p [Drosophila melanogaster] Length = 558 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 20/169 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ + I + IIV + + L + +A ++ CT ++++ Sbjct: 389 GDFSTKISSVVELVLKIKGENEQEKIIVFSQWQAILIEIARALSLNGIQFRNKCTNKDFD 448 Query: 106 E-----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + L + GLNL + + + ER + R + G Sbjct: 449 DFKNPLSNVTCLLMPLSKGSKGLNL-IEATHVFLVEPILNPGD-----ERQAIGRIHRFG 502 Query: 161 FKRAVFVYYLIAQNTIDELVLQR---------LRTKSTIQDLLLNALKK 200 KR V+ I TI+E +L L T ++++ L++LKK Sbjct: 503 QKRPTKVHRFIVNETIEENILSLITSADDTTTLSTHWDLENMTLDSLKK 551 >gi|260905079|ref|ZP_05913401.1| helicase, putative [Brevibacterium linens BL2] Length = 1009 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 27/220 (12%), Positives = 58/220 (26%), Gaps = 39/220 (17%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK-HWKEVHDEKIKALEV 61 Y + L+ + K ++ E W +I + Sbjct: 780 AYDQV-------LESHRPRKGGALETIQKLRSVSLHPATVPEFGASWSAAESARINGMIE 832 Query: 62 IIEK--ANAAPIIVA----------YHFNSDLARLQKAFPQGRT----------LDKDPC 99 ++++ I+ + + + G T Sbjct: 833 VLDEIREADEKAIIFVISKTVQTRLAVWLHERYGITPKIVNGETKAVASGSKKANLTRKG 892 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I ++ L G N + W+ + E R + Sbjct: 893 IITDFEAQSGFNLIIMSPLAVGVGLTVVGANHAIHLERHWNPAK-----EAQATDRIYRI 947 Query: 160 GFKRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 G R V VY +A + + D + LR+K+ ++D ++ Sbjct: 948 GQTRPVHVYLPLANHPTLSSFDVNLDALLRSKTDLKDAVV 987 >gi|170592285|ref|XP_001900899.1| Helicase conserved C-terminal domain containing protein [Brugia malayi] gi|158591594|gb|EDP30199.1| Helicase conserved C-terminal domain containing protein [Brugia malayi] Length = 741 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 54/158 (34%), Gaps = 17/158 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR 92 + + Y K + + + +I A + R + Sbjct: 558 RYIIDHYFYDGAPKKKVLIF-AHHQVVLDMISIDVAKKGL----------RSIRIDGTTA 606 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +D + + + G G+ L +++VF L W+ + Sbjct: 607 SRLRDEQCRLFQENDDVMVAVLSITAAGIGVTLTA-ASVVVFAELHWNPGTL-----KQA 660 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G K +VFV YLIA+ T D+++ ++ K + Sbjct: 661 EDRAHRLGQKDSVFVQYLIAKGTADDILWPLIQKKLDV 698 >gi|145477881|ref|XP_001424963.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124392030|emb|CAK57565.1| unnamed protein product [Paramecium tetraurelia] Length = 1215 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 57/172 (33%), Gaps = 17/172 (9%) Query: 42 YDEEKHWKEVHDEKIK--ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG-------- 91 ++E + + K++ E + K +++ + + L+ F Sbjct: 1035 FEELQSLQFGLSSKLEAVIKETKVIKQKKEKVLIFTQWIEMIGLLENQFKDSGIIAYRIT 1094 Query: 92 --RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 T+DK I+ + E + + + WW+ IE Sbjct: 1095 GSMTVDKREKIIKNFKEQQDVTALILSLRATSTGLNLTMASNVFLVDPWWNPA-----IE 1149 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 + R + G + V V + +NTI++ + + K L+ +++ Sbjct: 1150 DQAIGRADRIGQQNQVKVVRFLCRNTIEQQINLLHQKKKFYIKRALSNNQQK 1201 >gi|330824390|ref|YP_004387693.1| SNF2-like protein [Alicycliphilus denitrificans K601] gi|329309762|gb|AEB84177.1| SNF2-related protein [Alicycliphilus denitrificans K601] Length = 959 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 11/127 (8%) Query: 74 AYHFNSDLARLQKAFPQ--GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L R + +T D ++ + E ++ A + G+NLQ+ ++ Sbjct: 468 QAIYKDWLKRHEGTDRITGSKTADTRAALVEHFKERG-KVMIAT-EAGAEGINLQF-CSL 524 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTI 190 ++ + L W+ + +Q I R + G K V V + + N D V + L K + Sbjct: 525 VINYDLPWNPQRIEQRIGRC-----HRYGQKHDVVVVNFVDRSNEADARVYELLSQKFQL 579 Query: 191 QDLLLNA 197 + + A Sbjct: 580 FEGVFGA 586 >gi|10803646|ref|NP_046044.1| hypothetical protein VNG7099 [Halobacterium sp. NRC-1] gi|16120089|ref|NP_395677.1| ATP-dependent RNA helicase [Halobacterium sp. NRC-1] gi|169237287|ref|YP_001690493.1| ATP-dependent helicase [Halobacterium salinarum R1] gi|169237330|ref|YP_001690535.1| ATP-dependent helicase [Halobacterium salinarum R1] gi|2822377|gb|AAC82883.1| unknown [Halobacterium sp. NRC-1] gi|10584193|gb|AAG20812.1| ATP-dependent RNA helicase [Halobacterium sp. NRC-1] gi|167728353|emb|CAP15157.1| ATP-dependent helicase [Halobacterium salinarum R1] gi|167728846|emb|CAP15738.1| ATP-dependent helicase [Halobacterium salinarum R1] Length = 979 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 64/204 (31%), Gaps = 24/204 (11%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 E + + + + QL + + ++ I+ + Sbjct: 429 EAALETVTVTLNQSQIQEELDRVKQL----WRQAKSIETDSKAQMLKQFVDRILTEDPDE 484 Query: 70 PIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKIPLLFAHPASC 119 I++ + L L+ + NE I + Sbjct: 485 KILIFTEYTDTLEYLRDRVFAEYDIAQVYGDLDQDRRRQEMADFENEKNI---MIATDAA 541 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 GLNLQ+ +I+ F L W Q + R+ + G +R V + L ++T + Sbjct: 542 QEGLNLQF-AHIMANFDLPWSPTRIDQRMGRL-----HRYGQERTVEIRNLFFKDTRESE 595 Query: 180 VLQRLRTKSTIQDLLLNALKKETI 203 +L L K+ + L ++ + + Sbjct: 596 ILNLLVEKTDQIESDLG-MRSDVL 618 >gi|195588190|ref|XP_002083841.1| GD13945 [Drosophila simulans] gi|194195850|gb|EDX09426.1| GD13945 [Drosophila simulans] Length = 1270 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 24/174 (13%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTLDKDPCT 100 K KI ++ ++ K IIV + + L + +A ++ CT Sbjct: 1096 HKSIIGDFSTKIASIVELVLKIKGENEQEKIIVFSQWQAILIEIARALSLNGIQFRNKCT 1155 Query: 101 IQEWNE-----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +++++ + L + GLNL + + + ER + R Sbjct: 1156 NKDFDDFKNPYSNVTCLLMPLSKGSKGLNL-IEATHVFLVEPILNPGD-----ERQAIGR 1209 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRT---------KSTIQDLLLNALKK 200 + G KR V+ I T++E +L + + ++++ L++LKK Sbjct: 1210 IHRFGQKRPTKVHRFIVNGTVEENILSLITSADDTTTLGTHWDLENMTLDSLKK 1263 >gi|227544299|ref|ZP_03974348.1| possible helicase [Lactobacillus reuteri CF48-3A] gi|300909489|ref|ZP_07126950.1| SNF2 family helicase [Lactobacillus reuteri SD2112] gi|227185707|gb|EEI65778.1| possible helicase [Lactobacillus reuteri CF48-3A] gi|300893354|gb|EFK86713.1| SNF2 family helicase [Lactobacillus reuteri SD2112] Length = 373 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 21/165 (12%) Query: 51 VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDP 98 + K + +I+K + ++V F + Sbjct: 188 IEAPKFEMGIDLIDKLVSQGKKVLVWGMFVGTMQKITDTLNGMGIKTTLVYGATPKQDRE 247 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + G +L ++P + G ++L + V+F ++L Q +RI Sbjct: 248 GMINNFRIGDAQVLVSNPNTLGESISLHQTVHDAVYFEYNFNLTFMLQSRDRINRLGLPA 307 Query: 159 AGFKRAVFVYYLIAQ------NTIDELVLQRLRTKSTIQDLLLNA 197 + R YYL+ + ID V ++L+ K + ++ Sbjct: 308 NQYTR---YYYLMTKGDVAHMGFIDNTVYKKLKDKERVMLDAIDG 349 >gi|121609717|ref|YP_997524.1| helicase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121554357|gb|ABM58506.1| helicase domain protein [Verminephrobacter eiseniae EF01-2] Length = 906 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 6/111 (5%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G + + + + G G+NLQ N++V + L W+ +Q Sbjct: 265 MIHGGVKREDRRKVQELFRNDPSARFLVATDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQ 323 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ ++A T + V QRL K ++ L Sbjct: 324 RFGRI-----HRIGQTEVCHLWNMVAAETREGDVFQRLFEKLEVERQALGG 369 >gi|15613532|ref|NP_241835.1| SNF2 helicase [Bacillus halodurans C-125] gi|10173584|dbj|BAB04688.1| SNF2 helicase [Bacillus halodurans C-125] Length = 577 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 69/182 (37%), Gaps = 28/182 (15%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 GE I A + A + +K L+ + + + + + ++ + Sbjct: 357 GERITAPSKAIELLKLLK----------QSDEQAIVYSEYRVTIDLLSELLEEHDFTVTT 406 Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + + +I+ + + + + S G GLNLQ+ L+ F Sbjct: 407 Y-----------HGRLSSREKQQSIERFKNKEAQVFISS-ESGGQGLNLQF-CRRLINFD 453 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L W+ +Q I R+ + G V +Y + + IDE +L L +K + ++++ Sbjct: 454 LPWNPMRIEQRIGRV-----HRFGQVNDVEIYTMPTKGAIDEYLLYTLTSKVNLFEVVIG 508 Query: 197 AL 198 L Sbjct: 509 EL 510 >gi|256073537|ref|XP_002573086.1| harp (smarcal1)-related [Schistosoma mansoni] gi|238658258|emb|CAZ29318.1| harp (smarcal1)-related [Schistosoma mansoni] Length = 695 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 21/174 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR---------LQKAFPQGRT 93 +++ E K+ A+E + ++ H L ++ GRT Sbjct: 456 FEYFHETGSVKLPAIEQYVLDLIECGHKFLLFAHHTDVLDSLDKLLSEKSIRFIRIDGRT 515 Query: 94 LDKDPCTIQ--EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + E + + G GL+L N+++F L+W+ Sbjct: 516 NSEQRSVVCQIFQKEDDCRVALLSITAAGTGLHLTA-ANLVIFAELFWNPGALV-----Q 569 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R + G +V + YLIA+ T D+ + + K + L +ET + Sbjct: 570 AEDRAYRIGQMDSVLIRYLIAEQTADDFIWPLVERKLDVLSKA--GLNRETFRM 621 >gi|304320770|ref|YP_003854413.1| putative ATP-dependent RNA helicase [Parvularcula bermudensis HTCC2503] gi|303299672|gb|ADM09271.1| possible ATP-dependent RNA helicase [Parvularcula bermudensis HTCC2503] Length = 1173 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 9/117 (7%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + ++ I + + + ++ + G G+NLQ G+++V + L W+ + +Q Sbjct: 547 HGGVSREERRKVISRFMQDRELMVLVANDAAGEGVNLQR-GHLMVNYDLPWNPNKIEQRF 605 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RI + G ++ L+A NT + V RL K +ALK V Sbjct: 606 GRI-----HRIGQTEVCHLWNLVAANTREGQVYGRLLEKLETAR---SALKGRVYDV 654 >gi|297824995|ref|XP_002880380.1| hypothetical protein ARALYDRAFT_481010 [Arabidopsis lyrata subsp. lyrata] gi|297326219|gb|EFH56639.1| hypothetical protein ARALYDRAFT_481010 [Arabidopsis lyrata subsp. lyrata] Length = 800 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 8/121 (6%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPC--TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + G + ++ + N + + F +CG G++L G + + Sbjct: 643 SSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSPEAKVFFGSIKACGEGISL-VGASRV 701 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + + Q V R + G KR V+ Y L+A + +E + K + Sbjct: 702 LILDVHLNPSVTQ-----QAVARAYRPGQKRKVYAYKLVAAESPEEENYETCTRKEMMSK 756 Query: 193 L 193 + Sbjct: 757 M 757 >gi|148671572|gb|EDL03519.1| SNF2 histone linker PHD RING helicase, isoform CRA_a [Mus musculus] Length = 1646 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 47/148 (31%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA I+ + Sbjct: 1469 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFTQISRIKTFQ 1528 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + I +L + +GL + ++ + Q I R+ Sbjct: 1529 ENLSAFKYDPHINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1582 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1583 RIGQTKPTIVHRFLIKATIEERMQAMLK 1610 >gi|241202956|ref|YP_002974052.1| helicase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856846|gb|ACS54513.1| helicase domain protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 1170 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 8/110 (7%) Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G D+ + + + +L A A+ G+NLQ N++V + L W+ +Q Sbjct: 533 HGGTHRDERRRLQALFRSDPDVRVLVATDAAG-EGVNLQN-ANLMVNYDLPWNPNRLEQR 590 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A+ T + V RL K ++ L+ Sbjct: 591 FGRI-----HRIGQTEVCHLWNLVAKETREGDVYHRLLLKLEVESQALHG 635 >gi|225434275|ref|XP_002275596.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 944 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 59/191 (30%), Gaps = 23/191 (12%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y K E+ L + Q A V + + L + Sbjct: 733 YQKKMDEILEQLDVREGVKVKFFLNVLALCQSA---------GEKLLVFSQYLLPLRFL- 782 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHG 122 + + + + ++ +++ +N + F +CG G Sbjct: 783 -EKLTMKVNGWSSGKEIFVISGE-----SSSEQREWSMERFNTSPDARVFFGSIKACGEG 836 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 ++L G + ++ + + R + R + G K+ V VY L+A ++ +E Sbjct: 837 ISL-VGASRVLILDVHLNPSVT-----RQAIGRAFRPGQKKKVHVYKLVAADSPEEEDHN 890 Query: 183 RLRTKSTIQDL 193 K I + Sbjct: 891 TCFKKELISKM 901 >gi|329569081|gb|EGG50874.1| helicase protein [Enterococcus faecalis TX1467] Length = 2266 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + ++ +G+I +L G G N+Q + + W + Q Sbjct: 1893 FIHSAKNDRQREELFEKVRQGEIRILLGSTEKLGTGTNIQDKLLAVHHVDVPWRPSDLTQ 1952 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI Q + V +Y +A+N+ D + Q K + ++ Sbjct: 1953 RDGRIVR----QGNENKEVQIYRYVAKNSFDSFLWQTQENKLKFINQIM 1997 >gi|239607939|gb|EEQ84926.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3] Length = 1214 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 53/153 (34%), Gaps = 17/153 (11%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAH 115 + ++II L + + + +NE + +L Sbjct: 935 EQEKIIIFYEGNNTGFYIAEGLEILGVEFRIYANTLKTQTRSEYLSLFNETETVRVLLMD 994 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 HGL++ + + + WD IE + R + + V+V L+ + T Sbjct: 995 LRQASHGLHI-ACASRVFIVNPIWDP-----NIESQAIKRAHRISQTKPVYVETLVLKGT 1048 Query: 176 IDELVLQRLRT----------KSTIQDLLLNAL 198 +++ +L+R + K + D ++++ Sbjct: 1049 LEDRMLRRRKQMSTTELRHAEKDPLDDQTMSSI 1081 >gi|148671575|gb|EDL03522.1| SNF2 histone linker PHD RING helicase, isoform CRA_d [Mus musculus] Length = 1638 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 47/148 (31%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA I+ + Sbjct: 1461 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFTQISRIKTFQ 1520 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + I +L + +GL + ++ + Q I R+ Sbjct: 1521 ENLSAFKYDPHINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1574 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1575 RIGQTKPTIVHRFLIKATIEERMQAMLK 1602 >gi|147676740|ref|YP_001210955.1| hypothetical protein PTH_0405 [Pelotomaculum thermopropionicum SI] gi|146272837|dbj|BAF58586.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 82 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 5/68 (7%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + LWW+ +E R + G R V V+ LI+ T +E + + +K + Sbjct: 1 MIHYDLWWNPA-----VEDQATDRTYRIGQTRTVMVHRLISLGTFEEKINTMMASKRELA 55 Query: 192 DLLLNALK 199 L + A + Sbjct: 56 GLTVAAGE 63 >gi|118150662|ref|NP_001071175.1| E3 ubiquitin-protein ligase SHPRH isoform a [Mus musculus] gi|81894566|sp|Q7TPQ3|SHPRH_MOUSE RecName: Full=E3 ubiquitin-protein ligase SHPRH; AltName: Full=SNF2, histone-linker, PHD and RING finger domain-containing helicase gi|32822862|gb|AAH55003.1| SNF2 histone linker PHD RING helicase [Mus musculus] Length = 1674 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 47/148 (31%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA I+ + Sbjct: 1497 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFTQISRIKTFQ 1556 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + I +L + +GL + ++ + Q I R+ Sbjct: 1557 ENLSAFKYDPHINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1610 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1611 RIGQTKPTIVHRFLIKATIEERMQAMLK 1638 >gi|76153117|gb|AAX24778.2| SJCHGC03308 protein [Schistosoma japonicum] Length = 213 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 25/43 (58%) Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + G + V VY LI +NT++ +L+R K +Q +++ + + Sbjct: 1 RLGQTKPVTVYRLICKNTVEGRMLRRAEEKRAMQQMVIQSGQA 43 >gi|315446141|ref|YP_004079020.1| DNA/RNA helicase, superfamily II, SNF2 family [Mycobacterium sp. Spyr1] gi|315264444|gb|ADU01186.1| DNA/RNA helicase, superfamily II, SNF2 family [Mycobacterium sp. Spyr1] Length = 965 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ E +L A A+ G+NLQ +++V + + W+ +Q RI Sbjct: 532 DRRRAQANFITEPSSSVLIATDAAG-EGVNLQ-VAHLMVNYDVPWNPNRLEQRFGRI--- 586 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + ++ L+A +T + V + L K +Q L Sbjct: 587 --HRIGQRHTCHLWNLVAADTREGDVFRTLLEKVEVQREALGD 627 >gi|317028687|ref|XP_001390499.2| hypothetical protein ANI_1_1528034 [Aspergillus niger CBS 513.88] Length = 906 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 53/162 (32%), Gaps = 11/162 (6%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 + + DEK + +I ++A + ++ + + Sbjct: 729 ALLRNITKSRSISDEKGVQTKFVIFSYWTKMLDLIATALTENHLTFRRIDGRSSLSQRKE 788 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + ++ A + G G++L N + W+ M E + R + Sbjct: 789 ALGVFGSDPQCIIMLASIGAAGEGIDLTA-ANSIHIVEPQWNP-----MAEAQAIDRVHR 842 Query: 159 AGFKRAVFVYYLIAQNTID----ELVLQRLRTKSTIQDLLLN 196 G +R V V I +I+ + V K + + L+ Sbjct: 843 IGQERDVEVVRYITSESIESEAIQYVQWIQSDKLRLINKALS 884 >gi|310831392|ref|YP_003970035.1| putative superfamily II helicase [Cafeteria roenbergensis virus BV-PW1] gi|309386576|gb|ADO67436.1| putative superfamily II helicase [Cafeteria roenbergensis virus BV-PW1] Length = 816 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Query: 95 DKDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I+ + ++ + G +L N ++F ++ IE Sbjct: 722 FQRNKAIETFRGLRMNQSSKVIMLSLKNAASGTHL-VEANHIIFVDPVDSTKDSVIDIEN 780 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 + R + G K+ V+++ L+ ++TI+E + Sbjct: 781 QAIARAFRIGQKKKVYIHRLLIKDTIEENIY 811 >gi|312863051|ref|ZP_07723289.1| helicase C-terminal domain protein [Streptococcus vestibularis F0396] gi|311100587|gb|EFQ58792.1| helicase C-terminal domain protein [Streptococcus vestibularis F0396] Length = 931 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 559 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 618 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 619 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 665 >gi|256004417|ref|ZP_05429397.1| helicase domain protein [Clostridium thermocellum DSM 2360] gi|255991558|gb|EEU01660.1| helicase domain protein [Clostridium thermocellum DSM 2360] gi|316941350|gb|ADU75384.1| SNF2-related protein [Clostridium thermocellum DSM 1313] Length = 889 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 18/154 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ + + II+ F + D ++++ + E+ Sbjct: 461 FEIIDDLFAEDRQRKIIIFTEFVATQSYLVKLLKDRGYSTSILNGSMSIEERNAVLHEFK 520 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G GLNLQ+ N ++ + L W+ + +Q I R+ + G +R V Sbjct: 521 TQTD--ILISTDAGGEGLNLQF-SNCIINYDLPWNPMKIEQRIGRVD-----RIGQQRDV 572 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 VY I +T++ V L K ++ + K Sbjct: 573 VVYNFILADTVENRVKTVLEEKLSVILREIGIDK 606 >gi|194752217|ref|XP_001958419.1| GF23531 [Drosophila ananassae] gi|190625701|gb|EDV41225.1| GF23531 [Drosophila ananassae] Length = 1272 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 58/169 (34%), Gaps = 20/169 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ + I I++ + + L ++ KA + C Q++ Sbjct: 1102 GDFSTKISNIVEQVLKIRSANADEKILIFSQWQAILFQISKALALNNVKFRSKCIEQDFA 1161 Query: 106 EG-----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + I L + GLNL + + + +Q I RI + G Sbjct: 1162 DFKNPDLNITCLLMPLSKGSKGLNL-IEATHVFLVEPILNPGDEKQAIGRI-----HRFG 1215 Query: 161 FKRAVFVYYLIAQNTIDELVLQR---------LRTKSTIQDLLLNALKK 200 + V+ I TI+E +L L T ++++ L LK+ Sbjct: 1216 QTKPTKVHRFIVNGTIEENILSLITSADDTKTLSTHWDLENMTLEGLKQ 1264 >gi|327354368|gb|EGE83225.1| DNA repair helicase [Ajellomyces dermatitidis ATCC 18188] Length = 350 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 49/140 (35%), Gaps = 21/140 (15%) Query: 61 VIIEKANAAPIIVAYHFNSD---LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + + +++ F L+ + + G+++ +D + +L Sbjct: 74 DWFRRFSRTKVVIFTQFLGMASILSSMCQKNGWGQSVARDKHIRTFSKDPAARILICSLR 133 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G++L ++ FS R + +R V ++ QN+ID Sbjct: 134 TAGIGVDLTATNKCILAFS------------------RIFRIRQQRNVEFVRIVVQNSID 175 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 + + K+ + ++ + Sbjct: 176 DRIQLIQNEKTDGIEQVIGS 195 >gi|310796546|gb|EFQ32007.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1262 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 6/106 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T ++ + N ++ +L + G LNL GN ++ LWW+ Q Sbjct: 1092 NTEQRNKAVSEFQNGEEVKVLIVSLRAGGQCLNL-ERGNRVILMELWWNHAVEQ-----Q 1145 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + + + I+ +L+ K D L Sbjct: 1146 AFARVFRIGQSKETHFLRFVVKTPIENRMLEMQVGKILAIDNALQD 1191 >gi|83950945|ref|ZP_00959678.1| helicase [Roseovarius nubinhibens ISM] gi|83838844|gb|EAP78140.1| helicase [Roseovarius nubinhibens ISM] Length = 912 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 11/124 (8%) Query: 77 FNSDLARLQKAFPQGRTLDKD--PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + + R + + D ++ + + + + G G+NLQ+ ++LV Sbjct: 439 YKAWVERHKGTSVISGSKAADTKAAIVEAFRDDAD--ILIATEAGGEGVNLQF-CSLLVN 495 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDL 193 F L W+ + +Q I R+ + G K V V I + N DE V + L K + D Sbjct: 496 FDLPWNPQRVEQRIGRV-----HRYGQKCDVVVVNFINRSNRADERVFELLEEKFALFDG 550 Query: 194 LLNA 197 + A Sbjct: 551 VFGA 554 >gi|307277424|ref|ZP_07558517.1| N-6 DNA Methylase [Enterococcus faecalis TX2134] gi|306505913|gb|EFM75090.1| N-6 DNA Methylase [Enterococcus faecalis TX2134] Length = 2266 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + ++ +G+I +L G G N+Q + + W + Q Sbjct: 1893 FIHSAKNDRQREELFEKVRQGEIRILLGSTEKLGTGTNIQDKLLAVHHVDVPWRPSDLTQ 1952 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI Q + V +Y +A+N+ D + Q K + ++ Sbjct: 1953 RDGRIVR----QGNENKEVQIYRYVAKNSFDSFLWQTQENKLKFINQIM 1997 >gi|255973332|ref|ZP_05423918.1| SNF2 family protein [Enterococcus faecalis T1] gi|255964350|gb|EET96826.1| SNF2 family protein [Enterococcus faecalis T1] Length = 2266 Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + ++ +G+I +L G G N+Q + + W + Q Sbjct: 1893 FIHSAKNDRQREELFEKVRQGEIRILLGSTEKLGTGTNIQDKLLAVHHVDVPWRPSDLTQ 1952 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI Q + V +Y +A+N+ D + Q K + ++ Sbjct: 1953 RDGRIVR----QGNENKEVQIYRYVAKNSFDSFLWQTQENKLKFINQIM 1997 >gi|297744768|emb|CBI38030.3| unnamed protein product [Vitis vinifera] Length = 856 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ +++ +N + F +CG G++L G + ++ + + R Sbjct: 712 SSEQREWSMERFNTSPDARVFFGSIKACGEGISL-VGASRVLILDVHLNPSVT-----RQ 765 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + R + G K+ V VY L+A ++ +E K I + Sbjct: 766 AIGRAFRPGQKKKVHVYKLVAADSPEEEDHNSCFKKELISKM 807 >gi|157819469|ref|NP_001100940.1| E3 ubiquitin-protein ligase SHPRH [Rattus norvegicus] gi|149039552|gb|EDL93714.1| SNF2 histone linker PHD RING helicase (predicted) [Rattus norvegicus] Length = 1701 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 46/148 (31%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I K A +V + L + KA I+ + Sbjct: 1524 GSHSTKVEAVVRTLMKIQLKDPGAKALVFSTWQDVLDIISKALTDNNMGFTQISRIKTFQ 1583 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + + R Sbjct: 1584 ENLSAFKYDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHEL-----QAIGRVH 1637 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1638 RIGQTKPTIVHRFLIKATIEERMQAMLK 1665 >gi|119480763|ref|XP_001260410.1| C-5 cytosine-specific DNA methylase, putative [Neosartorya fischeri NRRL 181] gi|119408564|gb|EAW18513.1| C-5 cytosine-specific DNA methylase, putative [Neosartorya fischeri NRRL 181] Length = 2130 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 7/157 (4%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLA-----RLQKAFPQGR 92 A E + K+ L I++ N I+ F + Sbjct: 1939 ASLGFEGDRSTQYGGRKMDRLVEIVKGIPNQERAILFIQFRELIDVASKAFDLANITHTV 1998 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH-QQMIERI 151 +D I+E+ G ++ + S N ++F S ++ Sbjct: 1999 ITARDTKKIEEFKRGNGKVVILNLGSETAAGLNLQCTNHVIFLSPMLAETQYDYDSSMTQ 2058 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + R + G R V VY+L+ + TID + Q R K Sbjct: 2059 AIGRALRYGQTRRVHVYHLLMKRTIDINIFQERRRKI 2095 >gi|254516518|ref|ZP_05128577.1| putative helicase, Snf2 family [gamma proteobacterium NOR5-3] gi|219674941|gb|EED31308.1| putative helicase, Snf2 family [gamma proteobacterium NOR5-3] Length = 1167 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 29/176 (16%) Query: 51 VHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKA----------FPQGRTLDKD 97 V D K++AL II + +++ F L+ L G D+ Sbjct: 659 VDDPKLEALVGIIREKQLMDNNKLLIFSTFRHTLSYLLPRLESAGARVGLVHGGIADDER 718 Query: 98 PCTIQEW--NEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 T + N+ + GL+ Q+ ++ + + W+ +Q I RI Sbjct: 719 RQTRARFALNKAEPTAFDVLLSSEVGTEGLDNQFCDTLVN-YDIPWNPMRIEQRIGRIDR 777 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ-------DLLLNALKKET 202 + AV + +I +NT+D + R + + + +L L +E Sbjct: 778 ----RGQKSEAVSIKNMIVRNTVDARIYFRCLERIGVFRQSLGGSEEILGQLTREM 829 >gi|255954693|ref|XP_002568099.1| Pc21g10670 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589810|emb|CAP95964.1| Pc21g10670 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1167 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 41/119 (34%), Gaps = 7/119 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + + + ++ A + G GL+ N + L Sbjct: 1001 EENHWSYSEITGRMANRSREIHLDRFRTNDEYKIMIASIKTGGLGLDF-SVANKCILVDL 1059 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 WW+ + ++ R + G +R V L+ + +ID+ + + K+ +++ Sbjct: 1060 WWN-----EAVQDQAFFRLWRLGQQRDVECIMLMIKRSIDDWMDSTQKRKAKDISEVMS 1113 >gi|289621669|emb|CBI51580.1| unnamed protein product [Sordaria macrospora] Length = 1534 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 55/163 (33%), Gaps = 18/163 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQGRTLDKDPCT-- 100 H+ D ++ L + + A IV F LA+ + + G + Sbjct: 1260 PHYTTKVDTLLRHLLWLRQSDPGAKSIVFSQYPDFLHALAQAFERYRIGYSSFDRGAISS 1319 Query: 101 -IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + ++ I + H + GLNL + + + Q I R+ + Sbjct: 1320 VVCFRDDPSIEVFLLHARAHASGLNLVN-ASHVFLCEPLLNTALELQAIARVD-----RI 1373 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G K+ V+ I T+++ V + + L +++ Sbjct: 1374 GQKQETTVWLYIVDGTVEQNVYELSVKRR------LEHMERRV 1410 >gi|299744877|ref|XP_001831325.2| DNA repair protein rad8 [Coprinopsis cinerea okayama7#130] gi|298406330|gb|EAU90488.2| DNA repair protein rad8 [Coprinopsis cinerea okayama7#130] Length = 2184 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 31/102 (30%), Gaps = 1/102 (0%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + +G DK + +L + N ++F S Sbjct: 2065 YHGIGYLQIKGGVRDKTNSLENFKLGSEQRVLLLNVMDESASGANLTDANHVIFLSPLLT 2124 Query: 141 LEEHQQM-IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 E V R + G + V ++ I +NTIDE + Sbjct: 2125 PSNEVYEANETQAVGRVVRFGQTKHVHIWKFITKNTIDEEIY 2166 >gi|164661227|ref|XP_001731736.1| hypothetical protein MGL_1004 [Malassezia globosa CBS 7966] gi|159105637|gb|EDP44522.1| hypothetical protein MGL_1004 [Malassezia globosa CBS 7966] Length = 1610 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 46/139 (33%), Gaps = 17/139 (12%) Query: 63 IEKANAAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 I+ +V F + L A G + + + + + +L Sbjct: 1384 IQCTTGEKSLVFSSFARGLDLVASNLERHGLAYARVDGTGGKRSSAAVHAFQHKPDVRVL 1443 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + +E + R + G R +VY + Sbjct: 1444 LLHSEAQSAGLNLLA-ATHMFLLEPLLNHA-----MELQAIGRVHRIGQTRPTYVYGYMV 1497 Query: 173 QNTIDELVLQR-LRTKSTI 190 ++T++E ++ K ++ Sbjct: 1498 RDTVEERIVALAAERKQSL 1516 >gi|74316951|ref|YP_314691.1| DEAD/DEAH box helicase [Thiobacillus denitrificans ATCC 25259] gi|74056446|gb|AAZ96886.1| DEAD/DEAH box helicase [Thiobacillus denitrificans ATCC 25259] Length = 932 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 11/127 (8%) Query: 74 AYHFNSDLARLQKAFPQ--GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L R + +T D ++ + E ++ A + G+NLQ+ ++ Sbjct: 441 QAIYKDWLKRHEGTDRITGSKTADTRAALVEHFKERG-KVMIAT-EAGAEGINLQF-CSL 497 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTI 190 ++ + L W+ + +Q I R + G K V V + + N D V + L K + Sbjct: 498 VINYDLPWNPQRIEQRIGRC-----HRYGQKHDVVVVNFVDRSNEADARVYELLSQKFQL 552 Query: 191 QDLLLNA 197 + + A Sbjct: 553 FEGVFGA 559 >gi|116201631|ref|XP_001226627.1| hypothetical protein CHGG_08700 [Chaetomium globosum CBS 148.51] gi|88177218|gb|EAQ84686.1| hypothetical protein CHGG_08700 [Chaetomium globosum CBS 148.51] Length = 1996 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 2/87 (2%) Query: 99 CTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLW-WDLEEHQQMIERIGVTRQ 156 ++++ GK +L S + N +VF + + +EHQ R R Sbjct: 1884 AMLEKFKLGKAGRVLLLDMDSETSAGSNLTIANHVVFTNPYVHHDQEHQARTVRQARGRC 1943 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQR 183 + + V VY+ + TI+E +L++ Sbjct: 1944 IRTPQDKEVQVYHFMTSGTIEEEMLRK 1970 >gi|307110903|gb|EFN59138.1| hypothetical protein CHLNCDRAFT_137960 [Chlorella variabilis] Length = 1904 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 33/102 (32%), Gaps = 9/102 (8%) Query: 91 GRTLDKDPCTIQEW-NEGKIPLL--FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + + + + ++ +L A GL L + Sbjct: 1782 GASPGEREAALHAFLHDPACAVLTVVMSTAGGAAGLTLTA-ATTAFLLEPCLNPGL---- 1836 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 E R + G R V L+A+++++ VL+ R K Sbjct: 1837 -EAQAAARIWRLGQTRPTRVVRLLAEHSVESAVLEVQRRKLE 1877 >gi|297607123|ref|NP_001059497.2| Os07g0434500 [Oryza sativa Japonica Group] gi|255677716|dbj|BAF21411.2| Os07g0434500 [Oryza sativa Japonica Group] Length = 909 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + D++ Q N +LF +CG G++L G + ++ + Sbjct: 758 HVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVH 816 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + R + G ++ VFVY L+A ++ + + K I Sbjct: 817 LNPSVT-----RQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 863 >gi|169260103|gb|ACA51933.1| DNA methylase [Streptococcus equinus] Length = 908 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T DK ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 536 FVHDANTDDKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 595 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 596 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 642 >gi|145542730|ref|XP_001457052.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124424866|emb|CAK89655.1| unnamed protein product [Paramecium tetraurelia] Length = 767 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 69/226 (30%), Gaps = 39/226 (17%) Query: 8 QRELYCDLQGENIEAFNSASKTVKC-----LQLANGAVYYDEEKHWKE------------ 50 +R + + GE + + + QL N + E+K E Sbjct: 357 KRRVKVRIPGETSQVKQIGALLNQLGNIDIQQLINKDTIFQEQKDQSEQLLTINSILQKC 416 Query: 51 ---VHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC------ 99 KIKA++ I N + H L +Q+ Q Sbjct: 417 YMLTGQAKIKAIKDYICTLFENEIKFLFFAHHQDVLDAVQEYCVQNEIQYMRIDGNVGVE 476 Query: 100 -----TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 N +I + S +G+ L + +VF + W I Sbjct: 477 QRHLNVQMFQNNDEIRIAILSVTSANYGITLTA-ASTIVFGEMHWTPA-----IMLQAED 530 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G + V +YLI T+D+ + ++ K ++ K+ Sbjct: 531 RAHRIGQVQCVDCHYLIGDGTLDDHIFNKIENKMNTVSNFIDGQKQ 576 >gi|189465857|ref|ZP_03014642.1| hypothetical protein BACINT_02219 [Bacteroides intestinalis DSM 17393] gi|189434121|gb|EDV03106.1| hypothetical protein BACINT_02219 [Bacteroides intestinalis DSM 17393] Length = 408 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 16/185 (8%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + L ++ G I A K QL++G V + H + E + + Sbjct: 229 KSMRDNLMVEIDGNAILGDTPAKLLTKLHQLSSGTVIAENGLHLTFDKSK----AEFVRK 284 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + + + Y + S+ LQ F + + + + G+ Sbjct: 285 QFAGKKVALFYVYQSEAELLQSVFQNWTDSPE------VFQLSTDKVFISQVRRAREGVR 338 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + L+FF+L + + G R VY+L + I+ +L + Sbjct: 339 L-DTADALIFFNLEFS-----FLSYEQGRNRLVSKERTAPADVYFLCSDCGIESKILDAV 392 Query: 185 RTKST 189 K Sbjct: 393 HGKQD 397 >gi|147677051|ref|YP_001211266.1| DNA/RNA helicase [Pelotomaculum thermopropionicum SI] gi|146273148|dbj|BAF58897.1| hypothetical DNA/RNA helicase [Pelotomaculum thermopropionicum SI] Length = 937 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 59/193 (30%), Gaps = 24/193 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY--------YDEEKHWKEVHDEKI 56 + + E E S Q + + + + K Sbjct: 429 EQILKHRLVAFASEREEVKRLLSLA---RQCESLPDARAEALLEWMYRLQAEENDPELKF 485 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 I F + L++ QE+ G +L Sbjct: 486 LIFTEFIPTQEMLKE-----FLENRGFSVVCLNGSMGLEERRRVQQEF-AGHARVLV-ST 538 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G GLNLQ+ ++++ + L W+ +Q I R+ + G + V + Q+TI Sbjct: 539 DAGGEGLNLQF-CHVVINYDLPWNPMRLEQRIGRVD-----RIGQEHVVRALNFVLQDTI 592 Query: 177 DELVLQRLRTKST 189 + V + L+ K Sbjct: 593 EYRVQEVLQEKLA 605 >gi|295099195|emb|CBK88284.1| DNA methylase [Eubacterium cylindroides T2-87] Length = 3253 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + K + G++ +L A G G N+Q L W + QQ Sbjct: 2886 FIHTADSEAKKKELFSKVRAGQVRVLLGSTAKMGAGTNVQDKLIALHDLDCPWRPSDLQQ 2945 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + RI Q V +Y + + T D + Q + K ++ + Sbjct: 2946 RLGRIVR----QGNENEEVEIYRYVTEGTFDAYLYQLVENKQKFIAQIMTS 2992 >gi|302916821|ref|XP_003052221.1| hypothetical protein NECHADRAFT_106052 [Nectria haematococca mpVI 77-13-4] gi|256733160|gb|EEU46508.1| hypothetical protein NECHADRAFT_106052 [Nectria haematococca mpVI 77-13-4] Length = 759 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 9/106 (8%) Query: 93 TLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ I+E+N + +L + G GLNL G + ++ WW +Q+I R Sbjct: 629 KPERRTEVIREFNRQNSLMRVLLLSAVAGGTGLNLAGGCH-VILCEPWWTPGLVEQVIGR 687 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLL 195 + ++ V VY + A ++ID L+ ++L K D + Sbjct: 688 -----ANRMPQQKQVQVYKVTAAMSSIDTLIQEKLAKKQEFIDQTV 728 >gi|237743866|ref|ZP_04574347.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|229432897|gb|EEO43109.1| conserved hypothetical protein [Fusobacterium sp. 7_1] Length = 1163 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 65/217 (29%), Gaps = 40/217 (18%) Query: 3 QYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------ 54 Y K + + ++ + + + + D + + E Sbjct: 745 IYDKIRPSSQQEDIIENLKNTGKAALAIIQGMIMTCSHPQLVDRDVDEVPLGSEESLIEE 804 Query: 55 --KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDP 98 K++ + I+ + I+ + L + Sbjct: 805 AYKLEHIYTILTEVKKKNEKAIIFTKYKKMQKILWNVIKYWFDIEVGIVNGDADKTSRRR 864 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ P + G GLN+ N ++ ++ W+ + E R + Sbjct: 865 ILDDFRKKEGFNVIILSPEAAGVGLNI-VEANHVIHYTRHWNPAK-----EEQATDRAYR 918 Query: 159 AGFKRAVFVYYLIAQN----------TIDELVLQRLR 185 G K+ V+VYY I N T+DE + ++L Sbjct: 919 IGQKKDVYVYYPIISNVENIEREEYHTVDEWIRKQLE 955 >gi|291397118|ref|XP_002714908.1| PREDICTED: SNF2 histone linker PHD RING helicase [Oryctolagus cuniculus] Length = 1688 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 49/148 (33%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1511 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1570 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1571 ENLSAFKHDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1624 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + ++TI+E + L+ Sbjct: 1625 RIGQTKPTIVHRFLIKSTIEERMQAMLK 1652 >gi|221113471|ref|XP_002160604.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] gi|221136070|ref|XP_002171130.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 105 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 5/74 (6%) Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N +V + ++ ++ R + G R V VY I ++T++E +L Sbjct: 6 LTTANTVVLHDIDFNP-----YNDKQAEDRCHRLGQTRQVTVYKFIGKDTVEENILTCGE 60 Query: 186 TKSTIQDLLLNALK 199 K ++ L+ + Sbjct: 61 RKLQLEKELVGNTE 74 >gi|323450185|gb|EGB06068.1| hypothetical protein AURANDRAFT_7750 [Aureococcus anophagefferens] Length = 106 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 32/111 (28%), Gaps = 12/111 (10%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNIL 132 D + F G + + I+ + G + S G+ L + Sbjct: 2 RDDGFVVCEFTGGTSANDRDKHIRTFQSGLGKRGAPATVFVITTRSGNVGITLTA-ATRV 60 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 D R + G + V V +NT++E +++ Sbjct: 61 YLMEPMLDPGTEV-----QAAGRIHRLGQTKDVLVTRFCFKNTVEEDIVKL 106 >gi|255079200|ref|XP_002503180.1| SNF2 super family [Micromonas sp. RCC299] gi|226518446|gb|ACO64438.1| SNF2 super family [Micromonas sp. RCC299] Length = 1345 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 47/170 (27%), Gaps = 35/170 (20%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEK----------IKALEVIIEKANAAPIIVAYHFNS 79 ++ ++ N E + + +I +A +++ Sbjct: 794 MELRKVCNHPALNYPTDKGGEWRTGEDLVRTCGKLWMLDRMLIKLRAAGHRVLLFSTMTK 853 Query: 80 DLARLQKAFPQGRTLDK-----------------DPCTIQEWNEGKIP--LLFAHPASCG 120 L L+ T I +N + + G Sbjct: 854 LLDLLETYLKWRMTTPAGEGLEWCRIDGSTALDLREEAITAFNAPGSKKFIFLLSIRAAG 913 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 GLNLQ + +V + + + E V R + G +R V V ++ Sbjct: 914 RGLNLQT-ADTVVVYDPDPNPKN-----EEQAVARSHRIGQRREVRVLHM 957 >gi|302853578|ref|XP_002958303.1| hypothetical protein VOLCADRAFT_48099 [Volvox carteri f. nagariensis] gi|300256328|gb|EFJ40596.1| hypothetical protein VOLCADRAFT_48099 [Volvox carteri f. nagariensis] Length = 77 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 6/83 (7%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G NL ++ F L W+ + + R + G R FVY L+ Sbjct: 1 ILVSSKAGSLGTNLTSACRMV-IFDLPWNP-----VFNAQAIARIYRFGQTRPTFVYRLL 54 Query: 172 AQNTIDELVLQRLRTKSTIQDLL 194 T++ELV K + + + Sbjct: 55 YAATLEELVYDLNVDKEELFNKV 77 >gi|312213090|emb|CBX93172.1| similar to SNF2 family helicase [Leptosphaeria maculans] Length = 1210 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 55 KIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 K ++ E II + L + + + K ++ +N + + +L Sbjct: 953 KHQSEEKIIVFYDGDNAAYYIAQGLEVLHINHRIYARTLENTKRSEYVRLFNEDPTVRVL 1012 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A GLNL ++++ + +E + R + G R V V L+ Sbjct: 1013 LIDVACGALGLNL-NVASVVLIVNPINRP-----FLEAQAIKRAHRIGQTREVLVETLVL 1066 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +NTI+ + R + S + L+ + Sbjct: 1067 ENTIEHAIFDRAKKMSRTDHEVAKELEDD 1095 >gi|328545242|ref|YP_004305351.1| Helicase domain protein [Polymorphum gilvum SL003B-26A1] gi|326414984|gb|ADZ72047.1| Helicase domain protein [Polymorphum gilvum SL003B-26A1] Length = 1170 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 8/110 (7%) Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G D+ + + + +L A + G G+NLQ N++V + L W+ +Q Sbjct: 533 HGGTHRDERRRLQALFRSDPDVRVLVAT-DAAGEGVNLQN-ANLMVNYDLPWNPNRLEQR 590 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A+ T + V RL K ++ L+ Sbjct: 591 FGRI-----HRIGQTEVCHLWNLVAKETREGDVYHRLLLKLEVESQALHG 635 >gi|74202948|dbj|BAE26184.1| unnamed protein product [Mus musculus] Length = 469 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 47/148 (31%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA I+ + Sbjct: 314 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFTQISRIKTFQ 373 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + I +L + +GL + ++ + Q I R+ Sbjct: 374 ENLSAFKYDPHINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 427 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 428 RIGQTKPTIVHRFLIKATIEERMQAMLK 455 >gi|119357747|ref|YP_912391.1| helicase domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119355096|gb|ABL65967.1| helicase domain protein [Chlorobium phaeobacteroides DSM 266] Length = 967 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 9/108 (8%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + DK + + + + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 487 SHSADKRQAIVDWFRNEAT--IMIATEAAAEGINLQF-CSLVVNYDLPWNPQRIEQRIGR 543 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ V Q L K + + A Sbjct: 544 C-----HRYGQKFDVVVINFLNKANAADQRVYQLLDQKFKLFSGVFGA 586 >gi|322488767|emb|CBZ24014.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1577 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 8/109 (7%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 C + + +L + G G+ L + + + W+ + + R Sbjct: 547 RCISELQSNDACRVLLCSVRAGGVGIKLTA-ASHCILLDVSWNPTD-----DVQATYRLY 600 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--LNALKKETIH 204 + G R V +Y L T + +V +S +Q + ++ +++ H Sbjct: 601 RYGQLRPVSIYRLATWGTSEHIVFAYALQRSWLQKKIADISDPRRQQRH 649 >gi|160945895|ref|ZP_02093121.1| hypothetical protein FAEPRAM212_03428 [Faecalibacterium prausnitzii M21/2] gi|158443626|gb|EDP20631.1| hypothetical protein FAEPRAM212_03428 [Faecalibacterium prausnitzii M21/2] Length = 2701 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L W + QQ Sbjct: 2318 FIHEANTEVRKKELFSKVRSGQVRVLLGSTQKMGAGTNVQDRLVALHDLDCPWRPGDLQQ 2377 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + K ++ + Sbjct: 2378 RKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 2424 >gi|153006826|ref|YP_001381151.1| helicase domain-containing protein [Anaeromyxobacter sp. Fw109-5] gi|152030399|gb|ABS28167.1| helicase domain protein [Anaeromyxobacter sp. Fw109-5] Length = 1145 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 18/200 (9%) Query: 5 HKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + ++ EL L+ IE SK K Q+ N + +++ V E L+ + Sbjct: 454 QRLEKLVELARALEKREIE-----SKLNKLRQVLNEQQIFSDKRMKLLVFTEHKDTLDYL 508 Query: 63 IEKANAAPII---VAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 + + + T +E+ E +L A A+ Sbjct: 509 AGDGYDGRPLGKLREWGLSVTQIHGGMQIGDRDTPGTRIYAEREFRED-CQVLVATEAAG 567 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G+NLQ+ +++ + + W+ +Q + RI + G ++ ++ A NT + Sbjct: 568 -EGINLQF-CWLMINYDIPWNPVRLEQRMGRI-----HRYGQQKDCLIFNFAAVNTREGR 620 Query: 180 VLQRLRTKSTIQDLLLNALK 199 VL++L + L K Sbjct: 621 VLEKLLMRLAEIKDELGTDK 640 >gi|321460571|gb|EFX71612.1| hypothetical protein DAPPUDRAFT_10188 [Daphnia pulex] Length = 1009 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 47/148 (31%), Gaps = 13/148 (8%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK-------AFPQGRTLDKDP 98 ++ L +I + A +V + L + + + + Sbjct: 836 GSHSTKVQAVVQQLLLIKKDDPDAKCLVFSTWIDVLLIVGRALDENNISHCSFFSNKSQV 895 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + +L S +GLNL ++ + Q I R+ + Sbjct: 896 QLNKFKRDPSVSVLLIPIQSGANGLNLTE-ATHVLLMEPILNPGSELQAIGRV-----HR 949 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRT 186 G + V+ + ++TI+E + L Sbjct: 950 IGQTKPTVVHRFLVKHTIEEKMAVMLEK 977 >gi|170114873|ref|XP_001888632.1| predicted protein [Laccaria bicolor S238N-H82] gi|164636327|gb|EDR00623.1| predicted protein [Laccaria bicolor S238N-H82] Length = 129 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ + G GLN+ N ++ WW+ I R ++G R V Sbjct: 21 PCRVILVSIGAGGSGLNITA-CNHVILMEPWWNPYVEASSISR-----AYRSGQNRNVHT 74 Query: 168 YYLIAQNTIDELVL 181 Y+L+ Q++I+E ++ Sbjct: 75 YHLVVQDSIEENIV 88 >gi|326384403|ref|ZP_08206083.1| helicase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326196748|gb|EGD53942.1| helicase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 1164 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 6/105 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G +++ L+ + G GLNLQ +++V + L W+ +Q Sbjct: 538 HGGTRRADRVAIREQFTNEPDRLVLVATDAAGEGLNLQA-AHLMVNYDLPWNPNRLEQRF 596 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI + G K ++ ++A T + V RL K Q Sbjct: 597 GRI-----HRIGQKNVCRLWNIVAAETREGQVYTRLLAKMEQQRA 636 >gi|218847810|ref|YP_002454516.1| RecQ helicase, putative [Bacillus cereus G9842] gi|218546312|gb|ACK98704.1| RecQ helicase, putative [Bacillus cereus G9842] Length = 468 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 56/145 (38%), Gaps = 11/145 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG------RTLDKDPCTIQEWNEGKIP 110 + ++ + +++ + + ++ PQ + + I+ + E Sbjct: 294 TFTKQLLNDEPNSKVVIFTEYERMARIIYESLPQSVLYTGQISDREKNTVIERFREDPHT 353 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 F + GLNLQ N +V F L + E +Q RI T + +YY Sbjct: 354 RFFISTRAGSTGLNLQ-VANYMVHFDLPYTATELEQRNGRIDRT----GNNFSNITMYYY 408 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 I ++ DE +LQ L KS + +L Sbjct: 409 IMSDSYDEHMLQLLFKKSELAKEIL 433 >gi|255973573|ref|ZP_05424159.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|307285046|ref|ZP_07565196.1| N-6 DNA Methylase [Enterococcus faecalis TX0860] gi|255966445|gb|EET97067.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|306502947|gb|EFM72207.1| N-6 DNA Methylase [Enterococcus faecalis TX0860] Length = 1737 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + ++ +G+I +L G G N+Q + + W + Q Sbjct: 1364 FIHSAKNDRQREELFEKVRQGEIRILLGSTEKLGTGTNIQDKLLAVHHVDVPWRPSDLTQ 1423 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI Q + V +Y +A+N+ D + Q K + ++ Sbjct: 1424 RDGRIVR----QGNENKEVQIYRYVAKNSFDSFLWQTQENKLKFINQIM 1468 >gi|225427685|ref|XP_002273814.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 903 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 7/102 (6%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ +++ +N + F +CG G++L G + ++ + + R Sbjct: 765 SSEQREWSMERFNTSPDARVFFGSIKACGEGISL-VGASRVLILDVHLNPSVT-----RQ 818 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + R + G K+ V VY L+A ++ +E K I + Sbjct: 819 AIGRAFRPGQKKKVHVYKLVAADSPEEEDHNSCFKKELISKM 860 >gi|156031219|ref|XP_001584934.1| hypothetical protein SS1G_14031 [Sclerotinia sclerotiorum 1980] gi|154699433|gb|EDN99171.1| hypothetical protein SS1G_14031 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1393 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 21/161 (13%) Query: 51 VHDEKIKALEVII----EKANAAPIIVAYHFN---SDLARLQKAFPQGRTL--------D 95 + K AL+ ++ E+A +++ F + R+ A G Sbjct: 1172 LPSAKTTALKALLLKGFEEAPDDKVVIYVQFRTLARIIGRMCAAEGWGFLYLTGDASLEH 1231 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + I +L A G GLN + N + LWW+ Q R Sbjct: 1232 RTKAVKEFRIQDNIQILIAGLKCGGLGLNFPF-ANRCISLDLWWNYGVEQ-----QAFGR 1285 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + G + ++ L+ +N++D +L K + ++ Sbjct: 1286 IFRIGQNKETWMTRLVVRNSVDMRLLGMQDWKLRACEKAID 1326 >gi|68076919|ref|XP_680379.1| DNA helicase [Plasmodium berghei strain ANKA] gi|56501303|emb|CAH95084.1| DNA helicase, putative [Plasmodium berghei] Length = 835 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 6/139 (4%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 ++ + + F + +DK I+ + + KI + +CG Sbjct: 597 LLFCHHKLVMDEIDEFLKEKKLGFIRVDGLTPIDKREIYIKNFQSDEKIRIALLSITACG 656 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL N +VF L+W + Q +R + ++YL+AQNTIDE+V Sbjct: 657 VGLNLTA-ANTVVFGELYWVPGQMIQAEDRAHRIGTTHD----TINIHYLVAQNTIDEVV 711 Query: 181 LQRLRTKSTIQDLLLNALK 199 + + K LN + Sbjct: 712 WKIINRKWNTLTTALNGTE 730 >gi|326480935|gb|EGE04945.1| hypothetical protein TEQG_03790 [Trichophyton equinum CBS 127.97] Length = 1000 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 58/146 (39%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPAS 118 ++II + + + + + + +NEG+ + +L Sbjct: 722 KIIIFYESENTAFWIAEGLELVGTDFRIYAHTLKASQKSEYLSTFNEGESVRVLLMDLRQ 781 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + WD IE + R + R V+V L+ ++T+++ Sbjct: 782 ASHGLHI-ASASRVYIVNPIWDP-----NIESQAIKRAHRISQTRPVYVETLVLKDTLED 835 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L+R + + + + +K+ ++ Sbjct: 836 KMLRR---RKAMTSVEMQHAEKDMLN 858 >gi|326473936|gb|EGD97945.1| hypothetical protein TESG_05245 [Trichophyton tonsurans CBS 112818] Length = 1168 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 58/146 (39%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPAS 118 ++II + + + + + + +NEG+ + +L Sbjct: 890 KIIIFYESENTAFWIAEGLELVGTDFRIYAHTLKASQKSEYLSTFNEGESVRVLLMDLRQ 949 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + WD IE + R + R V+V L+ ++T+++ Sbjct: 950 ASHGLHI-ASASRVYIVNPIWDP-----NIESQAIKRAHRISQTRPVYVETLVLKDTLED 1003 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L+R + + + + +K+ ++ Sbjct: 1004 KMLRR---RKAMTSVEMQHAEKDMLN 1026 >gi|126661454|ref|ZP_01732511.1| putative DEAD/H helicase [Cyanothece sp. CCY0110] gi|126617267|gb|EAZ88079.1| putative DEAD/H helicase [Cyanothece sp. CCY0110] Length = 924 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 64/173 (36%), Gaps = 11/173 (6%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 +K +++ + E + + + + + + + +L + Sbjct: 746 TKLSAYIEILRHELTQRESAITFFQYTDTMDYVRDTLVQLYGNQVACYSGRGGELYEQGQ 805 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 K + + EG I +L S GLNLQ G +++ +S+ W+ + +Q Sbjct: 806 WRI-----VKKEQIKRLFKEGVIKVLLCT-KSASEGLNLQTCG-VILMYSMPWNPMQVEQ 858 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I R+ Q + ++ T++ V +RLR + + ++ L+ Sbjct: 859 QIGRLDRIGQV----YPTIRIHNFYYDGTVEAKVYRRLRDRIQAFETVVGNLQ 907 >gi|116071951|ref|ZP_01469219.1| DEAD/DEAH box helicase-like protein [Synechococcus sp. BL107] gi|116065574|gb|EAU71332.1| DEAD/DEAH box helicase-like protein [Synechococcus sp. BL107] Length = 1029 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 14/151 (9%), Positives = 32/151 (21%), Gaps = 20/151 (13%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y+K + + + + + Q+ N E + L Sbjct: 833 LYNKTVEDTLDAIATAPRGQRHGQVLALLTRLKQICNHPALAQREGAVDAEFLSRSAKLM 892 Query: 61 ----------------VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW 104 ++ + ++ G + + Sbjct: 893 RLEEILEEVIEAGDRALLFTQFAEWGHLLQAWMQQRWKSEVPFLHGGTRKSDRQAMVDRF 952 Query: 105 NEGK--IPLLFAHPASCGHGLNLQYGGNILV 133 E L + G GLNL ++ Sbjct: 953 QEDPRGPQLFLLSLKAGGVGLNLTRASHVFH 983 >gi|46805904|dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group] Length = 912 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 43/150 (28%), Gaps = 9/150 (6%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-----EKHWKEVHDEKIKALEVIIE 64 + L E + + +L N + D + Sbjct: 512 KNVKRLISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFS 571 Query: 65 KANAAPIIV-AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGH 121 + + + +++K + ++N+ + + G Sbjct: 572 GRSGFVTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGC 631 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 GLNL GGN L+ F W+ +Q+ +R Sbjct: 632 GLNL-VGGNRLILFDPDWNPANDKQVYQRQ 660 >gi|295112607|emb|CBL31244.1| Helicase conserved C-terminal domain./SNF2 family N-terminal domain. [Enterococcus sp. 7L76] Length = 2266 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + +G+I +L G G N+Q + + W + Q Sbjct: 1893 FIHSAKNDRQREELFENVRQGEIRILLGSTEKLGTGTNIQDKLLAVHHVDVPWRPSDLTQ 1952 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI Q + V +Y +A+N+ D + Q K + ++ Sbjct: 1953 RDGRIVR----QGNENKEVQIYRYVAKNSFDSFLWQTQENKLKFINQIM 1997 >gi|315171700|gb|EFU15717.1| protein, SNF2 family [Enterococcus faecalis TX1342] Length = 2159 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 33/109 (30%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + ++ G I +L G G N+Q W + Q Sbjct: 1801 FIHDAKTDLQKDTLFEKMRAGDIRVLLGSTQKVGTGTNVQNKLIAAHHIDCPWKPSDLTQ 1860 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI Q V +Y I + T D + Q K T ++ Sbjct: 1861 REGRILR----QGNENEEVAIYRYITKGTFDSYLWQIQEQKLTYISQVM 1905 >gi|281211182|gb|EFA85348.1| SNF2-related domain-containing protein [Polysphondylium pallidum PN500] Length = 1740 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 57/156 (36%), Gaps = 16/156 (10%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---- 97 ++ + W + I L I +K + I+ ++ L + +A + + + Sbjct: 1565 FNIKGSWGTKIESVISTLMTINKKKASDKTIIFSQWSDVLEIVSRALNENQIKHERGDKA 1624 Query: 98 ------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + E I +L +GLN+ + + +E Sbjct: 1625 SGIHFQDAIARFRKEPAINVLLLPIKKGANGLNI-IEATHIFIVEPLLNPA-----VEAQ 1678 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + R + G ++ F++ I +NTI+E V+Q + K Sbjct: 1679 AINRIHRFGQEKESFIHRFIIKNTIEEKVVQMSKAK 1714 >gi|195035831|ref|XP_001989375.1| GH11691 [Drosophila grimshawi] gi|193905375|gb|EDW04242.1| GH11691 [Drosophila grimshawi] Length = 735 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 45/140 (32%), Gaps = 6/140 (4%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 K + +I ++ + + + + + + Sbjct: 517 KEQPKFIIFAHHRVMMDAISDCLRELKVQFVRIDGRTVSDVRADYVDTFQKKSSCKAAVL 576 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 +C G+ L ++VF L W+ +R + G + V YL+A Sbjct: 577 SLKACNSGITLTA-AELIVFAELDWNPSTL-----AQAESRAHRIGQTKPVICRYLMAHQ 630 Query: 175 TIDELVLQRLRTKSTIQDLL 194 T D+++ L++K + + Sbjct: 631 TADDIIWNMLKSKQEVLSKV 650 >gi|307694074|ref|ZP_07636311.1| SNF2-related protein [Ruminococcaceae bacterium D16] Length = 2113 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G++ +L G G N+Q + + W + Q Sbjct: 1732 FIHDADTEAKKKDLFAKVRTGQVRVLLGSTQKMGAGTNVQDKLVAVHHLDVGWRPSDMTQ 1791 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V VY + + T D + Q L K ++ + Sbjct: 1792 RNGRIIR----QGNRNKEVQVYQYVTEETFDAYLYQTLENKQKFISQIMTS 1838 >gi|323449406|gb|EGB05294.1| hypothetical protein AURANDRAFT_17107 [Aureococcus anophagefferens] Length = 92 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 6/98 (6%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + +L A A+ G GLN+ N ++F WW+ H + R + Sbjct: 1 LERFKTAPSVNVLLATVATAGVGLNI-VEANNVLFLDRWWNPTVHD-----QAMDRTHRL 54 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G R V V +L +T+DE++ + KS ++L + Sbjct: 55 GQTRPVDVRFLDGVDTVDEVMRAINKFKSDNAQVILAS 92 >gi|310790973|gb|EFQ26506.1| hypothetical protein GLRG_01650 [Glomerella graminicola M1.001] Length = 1142 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 56/140 (40%), Gaps = 10/140 (7%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 E + ++II N + + + + ++ I +N + ++ ++ Sbjct: 884 EHQEREKLIIFYENENVAWYLAGILEVIHVRHFIYAKKLSYERKMSYINTFNNDPELRVI 943 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 GL++ + + F + + + I+ + R R+ ++ V V L+ Sbjct: 944 LMDLTQAAVGLDM-KAASRIYFINPVLNPQ-----IQTQAIGRARRISQQKPVTVETLVL 997 Query: 173 QNTIDELVLQRLRTKSTIQD 192 + +I+E++++R K ++ Sbjct: 998 RGSIEEVIVER---KKSMSQ 1014 >gi|328958690|ref|YP_004376076.1| hypothetical protein CAR_c24050 [Carnobacterium sp. 17-4] gi|328675014|gb|AEB31060.1| hypothetical protein CAR_c24050 [Carnobacterium sp. 17-4] Length = 814 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 11/117 (9%) Query: 89 PQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T + I + E +I +L ++P + G ++L + V+F ++L Q Sbjct: 676 YGGTTRQEREDIIHTFKEDTNEIQVLVSNPNTLGESVSLHTIVHDAVYFEYNYNLTFMLQ 735 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQ------NTIDELVLQRLRTKSTIQDLLLNA 197 +RI + R +YL+ N ID+ + +L K ++ Sbjct: 736 SRDRIHRLGLQHDQHTR---YHYLMTVTDMKLFNFIDQKIYNKLSEKEDRMKKAIDG 789 >gi|120402110|ref|YP_951939.1| helicase domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119954928|gb|ABM11933.1| helicase domain protein [Mycobacterium vanbaalenii PYR-1] Length = 964 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ E +L A A+ G+NLQ +++V + + W+ +Q RI Sbjct: 532 DRRRAQANFIAEPSSSVLIATDAAG-EGVNLQ-VAHLMVNYDVPWNPNRLEQRFGRI--- 586 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + ++ L+A +T + V + L K +Q L Sbjct: 587 --HRIGQRHTCHLWNLVAADTREGDVFRTLLEKVEVQREALGD 627 >gi|256618605|ref|ZP_05475451.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256598132|gb|EEU17308.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] Length = 2159 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 33/109 (30%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + ++ G I +L G G N+Q W + Q Sbjct: 1801 FIHDAKTDLQKDTLFEKMRAGDIRVLLGSTQKVGTGTNVQNKLIAAHHIDCPWKPSDLTQ 1860 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI Q V +Y I + T D + Q K T ++ Sbjct: 1861 REGRILR----QGNENEEVAIYRYITKGTFDSYLWQIQEQKLTYISQVM 1905 >gi|85857884|ref|YP_460086.1| SNF2 family DNA/RNA helicase [Syntrophus aciditrophicus SB] gi|85720975|gb|ABC75918.1| superfamily II DNA/RNA helicase, SNF2 family [Syntrophus aciditrophicus SB] Length = 1193 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 53/152 (34%), Gaps = 10/152 (6%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ---EWN 105 VI + +A + L R + + ++ + Sbjct: 522 IPKPTPSPHQKLVIFTEHRDTLNYLATRITTLLGRKEAVMTIHGGMGREDRMKAQEAFKH 581 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + ++ +L A A+ G+NLQ +++V + L W+ +Q RI + G Sbjct: 582 DPEVQVLLATDAAG-EGINLQR-AHLMVNYDLPWNPNRIEQRFGRI-----HRIGQTEVC 634 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ L+A T + V ++L K L Sbjct: 635 HLWNLVADETREGDVYRKLLDKLEQARQALGG 666 >gi|328848807|gb|EGF98004.1| hypothetical protein MELLADRAFT_84096 [Melampsora larici-populina 98AG31] Length = 206 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 43/132 (32%), Gaps = 17/132 (12%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIPL 111 + K ++ + + ++ ++ + N I Sbjct: 47 LHKGLGKKTVIYTQWRCFMEWIKIHLDCHGIESGSLHGELNPQERTLQLNRFKNNNNIEA 106 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G N+ + + W+ + QQ I+R+ Q G V VY+++ Sbjct: 107 FIVSIEAGGVGFNMT-CTDEVYLMDAHWNPQIVQQAIDRL-----HQIGQTHPVNVYHVV 160 Query: 172 AQNTIDELVLQR 183 A ++++ + Sbjct: 161 AGESVEQHLFNV 172 >gi|159027513|emb|CAO89477.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1171 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 21/186 (11%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 + K LAN +++ W+E E+ I+V L L+ Sbjct: 464 IALLKKLEDLANSVRRSGKDRKWEEFSHLLQDEAEMFDAGGYRRKIVVFTEHRDTLNYLK 523 Query: 86 KAF-------------PQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNI 131 + G + + + + + +L A + G G+NLQ ++ Sbjct: 524 ERISTLLGNPEAVVTIHGGMGREDRKKAEEGFKQDVGVQVLLAT-DAAGEGINLQR-AHL 581 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +V + L W+ +Q RI + G ++ L+A T + V + L K + Sbjct: 582 MVNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWNLVAHETREGDVYRTLLEKLEAE 636 Query: 192 DLLLNA 197 L Sbjct: 637 QKALGG 642 >gi|327295284|ref|XP_003232337.1| SNF2 family helicase [Trichophyton rubrum CBS 118892] gi|326465509|gb|EGD90962.1| SNF2 family helicase [Trichophyton rubrum CBS 118892] Length = 1167 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 58/146 (39%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPAS 118 ++II + + + + + + +NEG+ + +L Sbjct: 889 KIIIFYESENTAFWIAEGLELVGTDFRIYAHTLKASQKSEYLSTFNEGESVRVLLMDLRQ 948 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + WD IE + R + R V+V L+ ++T+++ Sbjct: 949 ASHGLHI-ASASRVFIVNPIWDP-----NIESQAIKRAHRISQTRPVYVETLVLKDTLED 1002 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L+R + + + + +K+ ++ Sbjct: 1003 KMLRR---RKAMTSVEMQHAEKDMLN 1025 >gi|317490714|ref|ZP_07949177.1| hypothetical protein HMPREF1023_02877 [Eggerthella sp. 1_3_56FAA] gi|316910184|gb|EFV31830.1| hypothetical protein HMPREF1023_02877 [Eggerthella sp. 1_3_56FAA] Length = 2244 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + G++ +L G G N+Q L W + +Q Sbjct: 1646 YVHDAKTEKAKARLFEAARSGEVRVLMGSTQKLGEGTNVQTRLVALHHLDCPWRPSDLEQ 1705 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + + T D + Q + K + Sbjct: 1706 REGRILR----QGNRNKEVGIYRYVTKGTFDSYMYQTVEHKQRFIGQVFGG 1752 >gi|264680182|ref|YP_003280091.1| hypothetical protein CtCNB1_4049 [Comamonas testosteroni CNB-2] gi|262210697|gb|ACY34795.1| hypothetical conserved protein [Comamonas testosteroni CNB-2] Length = 1177 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 71/216 (32%), Gaps = 35/216 (16%) Query: 4 YHKFQRELY---------CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 Y +F+ E+ +L+ E + + V +++ W+E+ + Sbjct: 439 YEQFEEEVVDQATAAQTIAELEAEVFTLEHLEKQARAL-------VVSGQDRKWEELREI 491 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCTI 101 E++ +I+ L + Sbjct: 492 LQNTPEMLGPDGLQRKLIIFTEHRDTLNYLADRIRGLLGKREAVTMIHGSTHREDRRKVQ 551 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + + + + + G G+NLQ N++V + L W+ +Q RI + G Sbjct: 552 EMFRTDRDTRVLLATDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIGQ 605 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +A ++ ++A T + V Q+L K I+ L Sbjct: 606 TQACHLWNMVAAETREGNVFQKLFEKLEIERKALGG 641 >gi|195427783|ref|XP_002061956.1| GK17274 [Drosophila willistoni] gi|194158041|gb|EDW72942.1| GK17274 [Drosophila willistoni] Length = 1274 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 64/175 (36%), Gaps = 24/175 (13%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAA----PIIVAYHFNSDLARLQKAFPQGRTLDKDP- 98 + + +KI + +I K +++ + + L ++ KA + + Sbjct: 1097 QRNSIIGDYSKKITHIVELILKIKNNDDQEKVLIFSQWQAILLQIAKALSDNGIVYRSKC 1156 Query: 99 --CTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I ++ + + + L + GLNL + + + ER + Sbjct: 1157 HNQDIVDFKDPNLKITCLLMPLSRGSKGLNL-IEATHVFLVEPILNPSD-----ERQAIG 1210 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQR---------LRTKSTIQDLLLNALKK 200 R + G + V+ I +TI+E +L L T ++++ L+ LKK Sbjct: 1211 RIHRFGQSKPTTVHRFIVNDTIEENILSLITSDDDSKTLSTHWDLENMTLHGLKK 1265 >gi|85099203|ref|XP_960732.1| hypothetical protein NCU03652 [Neurospora crassa OR74A] gi|16944466|emb|CAC18163.2| conserved hypothetical protein [Neurospora crassa] gi|28922252|gb|EAA31496.1| predicted protein [Neurospora crassa OR74A] Length = 1541 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 53/162 (32%), Gaps = 18/162 (11%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN---SDLARLQKAFPQGRTLDKDPCT-- 100 H+ D ++ L + + A IV + LA+ + + G + Sbjct: 1253 PHYTTKVDTLLRHLLWLRQSDPGAKSIVFSQYQDFLHVLAQAFERYHIGYSSFYRSAVSS 1312 Query: 101 -IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + I + H + GLNL + + + Q I R+ + Sbjct: 1313 VASFREDPSIEVFLLHARAHASGLNLVN-ASHVFLCEPLLNTALELQAIARVD-----RI 1366 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G K+ V+ I T+++ V + + L +++ Sbjct: 1367 GQKQETTVWLYIVDGTVEQNVYELSVKRR------LEHMERR 1402 >gi|295110781|emb|CBL24734.1| DNA methylase [Ruminococcus obeum A2-162] Length = 2686 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T K + G++ +L G G N+Q L W + +Q Sbjct: 2279 FIHEYNTEVKKAELFAKVRAGQVRILMGSTPKLGAGTNVQDRLLALHHLDCPWKPSDLEQ 2338 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q L K ++ + Sbjct: 2339 QEGRILR----QGNQNDKVKIFRYVTENTFDSYMWQILENKQKFISQIMTS 2385 >gi|291461005|ref|ZP_06026388.2| SNF2-related protein [Fusobacterium periodonticum ATCC 33693] gi|291379579|gb|EFE87097.1| SNF2-related protein [Fusobacterium periodonticum ATCC 33693] Length = 1166 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 65/217 (29%), Gaps = 40/217 (18%) Query: 3 QYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------ 54 Y K + + ++ + + + + D + + E Sbjct: 748 IYDKIKPSSQQEDIIEKLKNTGKAALAIIQGMIMTCSHPQLVDRDVDEVPLGSEESLIEE 807 Query: 55 --KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDP 98 K++ + I+ + I+ + L + Sbjct: 808 AYKLEHIYTILTEVKKKNEKAIIFTKYKKMQKILWNVIKYWFDIEVGIVNGDADKTSRRR 867 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ P + G GLN+ N ++ ++ W+ + E R + Sbjct: 868 ILDDFRKKEGFNVIILSPEAAGVGLNI-VEANHVIHYTRHWNPAK-----EEQATDRAYR 921 Query: 159 AGFKRAVFVYYLIAQN----------TIDELVLQRLR 185 G K+ V+VYY I N T+DE + ++L Sbjct: 922 IGQKKDVYVYYPIISNVEKIERDEYRTVDEWIRKQLE 958 >gi|13905182|gb|AAH06883.1| Shprh protein [Mus musculus] Length = 581 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 47/148 (31%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA I+ + Sbjct: 404 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFTQISRIKTFQ 463 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + I +L + +GL + ++ + Q I R+ Sbjct: 464 ENLSAFKYDPHINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 517 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 518 RIGQTKPTIVHRFLIKATIEERMQAMLK 545 >gi|302658392|ref|XP_003020900.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] gi|291184770|gb|EFE40282.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] Length = 1167 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 58/146 (39%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPAS 118 ++II + + + + + + +NEG+ + +L Sbjct: 889 KIIIFYESENTAFWIAEGLELVGTDFRIYAHTLKASQKSEYLSTFNEGESVRVLLMDLRQ 948 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + WD IE + R + R V+V L+ ++T+++ Sbjct: 949 ASHGLHI-AIASRVFIVNPIWDP-----NIESQAIKRAHRISQTRPVYVETLVLKDTLED 1002 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L+R + + + + +K+ ++ Sbjct: 1003 KMLRR---RKAMTSVEMQHAEKDMLN 1025 >gi|302498861|ref|XP_003011427.1| SNF2 family helicase, putative [Arthroderma benhamiae CBS 112371] gi|291174978|gb|EFE30787.1| SNF2 family helicase, putative [Arthroderma benhamiae CBS 112371] Length = 1167 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 58/146 (39%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPAS 118 ++II + + + + + + +NEG+ + +L Sbjct: 889 KIIIFYESENTAFWIAEGLELVGTDFRIYAHTLKASQKSEYLSTFNEGESVRVLLMDLRQ 948 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + WD IE + R + R V+V L+ ++T+++ Sbjct: 949 ASHGLHI-AIASRVFIVNPIWDP-----NIESQAIKRAHRISQTRPVYVETLVLKDTLED 1002 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L+R + + + + +K+ ++ Sbjct: 1003 KMLRR---RKAMTSVEMQHAEKDMLN 1025 >gi|15226547|ref|NP_179740.1| CHR34 (chromatin remodeling 34); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|4567276|gb|AAD23689.1| hypothetical protein [Arabidopsis thaliana] gi|330252085|gb|AEC07179.1| chromatin remodeling 34 [Arabidopsis thaliana] Length = 816 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 44/121 (36%), Gaps = 8/121 (6%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPC--TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + G + ++ + N + + F +CG G++L G + + Sbjct: 657 SSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSLEAKVFFGSIKACGEGISL-VGASRV 715 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + + + Q V R + G KR V+ Y L+A ++ +E + K + Sbjct: 716 LILDVHLNPSVTQ-----QAVARAYRPGQKRKVYAYKLVAADSPEEENYETCTRKEMMSK 770 Query: 193 L 193 + Sbjct: 771 M 771 >gi|119487812|ref|ZP_01621321.1| hypothetical protein L8106_30060 [Lyngbya sp. PCC 8106] gi|119455645|gb|EAW36782.1| hypothetical protein L8106_30060 [Lyngbya sp. PCC 8106] Length = 1084 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 59/184 (32%), Gaps = 15/184 (8%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 L L A + S+ K QL + + +E + E I + A Sbjct: 486 NLVESLDELVSLAEAALSQDPKLDQL----IREIQTIRTQEPDANILIYTEYIDSQKAAV 541 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 + + +A + + + +L + GLNLQ Sbjct: 542 KALEKAEIGTVIAMSGQNSNEI-----RSQMTSRFCREANLVLI-STDTAAEGLNLQQKC 595 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + L+ L ++ +Q RI + G K V YL Q T +E +L RL K Sbjct: 596 HHLIHLELPFNPNRLEQRNGRID-----RFGQKFNPEVRYLYLQGTFEERILLRLIAKYE 650 Query: 190 IQDL 193 Q Sbjct: 651 RQRS 654 >gi|91202363|emb|CAJ75423.1| similar to helicase subunit of dna repair complex [Candidatus Kuenenia stuttgartiensis] Length = 964 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 9/108 (8%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ DK + + + ++ + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 491 SKSADKRAAIVDYFRDEA--VIMIATEAAAEGINLQF-CSLVVNYDLPWNPQRIEQRIGR 547 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ V Q L+ K + D + A Sbjct: 548 C-----HRYGQKFDVVVVNFLNKSNAADQRVYQLLKEKFKLFDGIFGA 590 >gi|8778961|gb|AAD49766.2|AC007932_14 Contains similarity to HARP gene from Homo sapiens gb|AF210842. It contains SNF2 N-terminal PF|00176 and helicase C-terminal PF|00271 domains [Arabidopsis thaliana] Length = 592 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 40/92 (43%), Gaps = 6/92 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +I + G G+ L + ++F L W + R + G +V Sbjct: 452 KDEIKAAVLSIRAAGVGITLTA-ASTVIFAELSWTPGDLI-----QAEDRAHRIGQVSSV 505 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++YL+A +T+D+++ +++K +L+ Sbjct: 506 NIHYLLANDTVDDIIWDVVQSKLDNLGQMLDG 537 >gi|78190609|gb|ABB29626.1| SWI/SNF-related matrix-associated regulator of chromatin a5 [Priapulus caudatus] Length = 377 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 56/176 (31%), Gaps = 35/176 (19%) Query: 2 KQY---HKFQRELYCDLQGENIEAFNS---------ASKTVKCLQLANGAVYY------- 42 K Y K QR+ Y + ++I+ N + ++ + AN + Sbjct: 203 KIYIGLSKMQRDWYTKILMKDIDIVNGAGKTDKLRLLNILMQLRKCANHPYLFDGAEPGP 262 Query: 43 -DEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 + K+ L+ ++++ + +++ L L+ Sbjct: 263 PYTTDMHLVTNGGKMVILDKLLQRLKVRGSRVLIFSQMTRMLDILEDYCAWRGYDYCRLD 322 Query: 91 -GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + +I E+N + + G G+NL + ++ + W+ + Sbjct: 323 GSTAHEDRQNSIDEFNRPGSEKFVFMLSTRAGGLGINL-ATADSVIMYDSDWNPQV 377 >gi|313906357|ref|ZP_07839698.1| helicase domain protein [Eubacterium cellulosolvens 6] gi|313468821|gb|EFR64182.1| helicase domain protein [Eubacterium cellulosolvens 6] Length = 1190 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 31/178 (17%) Query: 53 DEKIKALEVIIEKANA---APIIVAYHFNSDLARLQKAFPQG----------RTLDKDPC 99 D K++ L +I + +I+ F L ++K ++ Sbjct: 678 DPKLEKLFDVIARKQGEENNRVILFSSFQHTLRYVKKHLQAKGYRVAQVDGFVPDEERFE 737 Query: 100 TIQEW-----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + NE + +L GL+ Q+ + ++ + L W+ +Q I RI Sbjct: 738 IRERFLMDRDNEQAVDVLLFS-EVGCEGLDYQF-CDTMINYDLPWNPMRIEQRIGRIDR- 794 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD-------LLLNALKKETIHV 205 + +V +Y +I TID ++ R +K + + +L + ++ I + Sbjct: 795 ---RGQKSESVRIYNMITDGTIDAVIHDRCLSKIGVFESSIGECSEILGEINEQIIKI 849 >gi|302889034|ref|XP_003043403.1| hypothetical protein NECHADRAFT_87480 [Nectria haematococca mpVI 77-13-4] gi|256724319|gb|EEU37690.1| hypothetical protein NECHADRAFT_87480 [Nectria haematococca mpVI 77-13-4] Length = 939 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 7/100 (7%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D ++ + I + N+ + ++ A + G G++L N + Sbjct: 817 EDKGMKFCRIDGQASMSQRKQAIATFGNDPECNIMLASIGAVGEGIDL-VCANSVHIIEP 875 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 W+ M E + R + G ++ V V I ++I+ Sbjct: 876 HWNP-----MAEAQAIDRVHRIGQQQEVDVVRYIVNDSIE 910 >gi|153811865|ref|ZP_01964533.1| hypothetical protein RUMOBE_02258 [Ruminococcus obeum ATCC 29174] gi|149831999|gb|EDM87084.1| hypothetical protein RUMOBE_02258 [Ruminococcus obeum ATCC 29174] Length = 2592 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T K + G++ +L G G N+Q L W + +Q Sbjct: 2185 FIHEYNTEVKKAELFAKVRAGQVRILMGSTPKLGAGTNVQDRLLALHHLDCPWKPSDLEQ 2244 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q L K ++ + Sbjct: 2245 QEGRILR----QGNQNDKVKIFRYVTENTFDSYMWQILENKQKFISQIMTS 2291 >gi|162451515|ref|YP_001613882.1| hypothetical protein sce3243 [Sorangium cellulosum 'So ce 56'] gi|161162097|emb|CAN93402.1| hypothetical protein sce3243 [Sorangium cellulosum 'So ce 56'] Length = 1214 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 9/126 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNIL 132 + + F G D + +N E + +L A + G+NLQ L Sbjct: 703 HTEEGEQRIMQFHGGMGDDARDEVQRAFNSAPDEHPVRILVAT-DAAREGVNLQAHCADL 761 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + W+ +Q RI T Q V +Y + ++ VL+ + K Sbjct: 762 FHIDIPWNPARMEQRNGRIDRTLQPAP----EVRCHYFVYPQRSEDQVLETVVRKIATVQ 817 Query: 193 LLLNAL 198 L +L Sbjct: 818 RELGSL 823 >gi|170727301|ref|YP_001761327.1| helicase domain-containing protein [Shewanella woodyi ATCC 51908] gi|169812648|gb|ACA87232.1| helicase domain protein [Shewanella woodyi ATCC 51908] Length = 937 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 14/168 (8%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 L+ I+A N K Q + + K + + + + + E + + Sbjct: 495 LKELIIDATNLLEHDNKSKQ-------FIDTIITKILKNNPKEKVLIFTEYRSTQQYLAK 547 Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 A G LD+ I ++ + G G+NLQ +I++ Sbjct: 548 TLQQKIGADSVNLIYGGMKLDERKQQIYDFENTGQ--FLISTEAGGEGINLQEHCHIMIN 605 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + L W+ Q + R+ + G + V V+ + + +++DE VL+ Sbjct: 606 YDLPWNPMRLVQRVGRL-----YRYGQLKRVVVFNINSSDSLDEKVLE 648 >gi|237722627|ref|ZP_04553108.1| helicase domain-containing protein [Bacteroides sp. 2_2_4] gi|229448437|gb|EEO54228.1| helicase domain-containing protein [Bacteroides sp. 2_2_4] Length = 1139 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 81/222 (36%), Gaps = 36/222 (16%) Query: 3 QYHKFQRELYCDLQG---------------ENIEAFNSASKTVKCLQLANGAVYYDEEKH 47 QY + + L G E A + + ++AN ++ Sbjct: 423 QYDDLEDDERDALDGILSDPRKFKLFTTSKSLAEIQTEAKEVKRLYEMANS----LYNQN 478 Query: 48 WKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKD 97 +E ++K L N +++ L L++ G ++D+ Sbjct: 479 QEEKKYIELKELLKSQGVINGEKLVIFTEHKDTLLYLRERLSNNGYKVAVIHGGLSVDER 538 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++ + +L A A+ G+NLQ+ +L+ + + W+ +Q + RI Sbjct: 539 RQAQWDFMSPETQILIATDAAG-EGINLQF-CRLLINWDIPWNPNRLEQRMGRI-----H 591 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + G K V V+ ++A NT + VL RL K I + + Sbjct: 592 RYGQKNDVLVFNVVADNTREGQVLSRLLIKLDIIRQSMGDDR 633 >gi|115524177|ref|YP_781088.1| helicase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115518124|gb|ABJ06108.1| helicase domain protein [Rhodopseudomonas palustris BisA53] Length = 953 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 2/88 (2%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++ G+ +L A + G NLQ+ + ++FF+L W + QQ I RI + Sbjct: 410 KEALDDFISGEAKVLVAS-DAAREGHNLQF-ADEIIFFALPWSPPDIQQWIGRIDRLGTK 467 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 R + + ++ + +I++ +L L Sbjct: 468 GRAANRRIAITPIVIEGSIEDQILAVLE 495 >gi|308274079|emb|CBX30678.1| hypothetical protein N47_E41900 [uncultured Desulfobacterium sp.] Length = 1194 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 10/159 (6%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI 101 K VI + + + L R + + ++ Sbjct: 515 MPYGKVRIPKPTPSQHQKLVIFTEHRDTLSYLETRITTLLGRKEAVVIIHGGMGREDRMK 574 Query: 102 Q---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ ++ +L A A+ G+NLQ +++V + L W+ +Q RI + Sbjct: 575 AQEAFRHDPEVKVLLATDAAG-EGINLQR-AHLMVNYDLPWNPNRIEQRFGRI-----HR 627 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G ++ L+A+ T + V +RL K L Sbjct: 628 IGQTEVCHLWNLVAEETREGDVYRRLLDKLEQARQSLGG 666 >gi|75907548|ref|YP_321844.1| SNF2-like helicase [Anabaena variabilis ATCC 29413] gi|75701273|gb|ABA20949.1| SNF2-related Helicase [Anabaena variabilis ATCC 29413] Length = 1082 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPL---LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 F G ++ +N + + + G+NLQ L F + W+ Sbjct: 562 FHGGIGEERREAIKNAFNADPLRHPLRILIATDAAREGVNLQNNCADLFHFDVPWNPSRM 621 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 +Q RI QR V YY + ++ VL+ L K+ Sbjct: 622 EQRNGRIDRKLQRSPI----VHCYYFVLAQRTEDKVLKVLVKKTETIQK 666 >gi|15823603|dbj|BAB69051.1| putative RNA polymerase associated protein [Sphaerotilus natans] Length = 247 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 55/146 (37%), Gaps = 12/146 (8%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL-------DKDPCTIQEWNEGKIPLLFA 114 + +++ + + L L K + ++ + + Sbjct: 4 YWRENVGKKVVLFAFYRNTLYYLAKRLAEAGVKSIVLHGGMDKSEVLRSFEGDDSVQILL 63 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 G++LQ+ ++ + L W+ +Q I RI Q +A + ++ L+ ++ Sbjct: 64 SSEVASEGVDLQFSSLLVN-YDLPWNPARIEQRIGRIDRIGQAEAK----ILIWNLVYED 118 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKK 200 T+DE V RL + + L ++++ Sbjct: 119 TLDERVHDRLLERLNVFRQALGSMEE 144 >gi|85119219|ref|XP_965595.1| hypothetical protein NCU02913 [Neurospora crassa OR74A] gi|28927406|gb|EAA36359.1| predicted protein [Neurospora crassa OR74A] Length = 846 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 27/89 (30%), Gaps = 7/89 (7%) Query: 109 IPLLFAHPAS-CGHGLNLQ-YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 I L + L + W+ E + R + G R V Sbjct: 730 IKSLILQLKNLACDTKRLTLTVASYAFLMEPHWNPTL-----EDQALARIHRMGQTREVT 784 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +++ +E V++ K + +LL Sbjct: 785 TARFFIRDSFEERVMEVQEKKRKLVTVLL 813 >gi|242214471|ref|XP_002473058.1| predicted protein [Postia placenta Mad-698-R] gi|220727888|gb|EED81795.1| predicted protein [Postia placenta Mad-698-R] Length = 67 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + ++ F W+ + + R + G + V VY LI Q ++++ +L R+R Sbjct: 7 LTRASTVIMFDSDWNPQNDM-----QAIARAHRIGQTKVVKVYRLICQGSVEDQMLDRIR 61 Query: 186 TKSTIQ 191 K + Sbjct: 62 RKLFLS 67 >gi|219118763|ref|XP_002180148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408405|gb|EEC48339.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 773 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 33/117 (28%), Gaps = 7/117 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D + + G + G GL L ++ W Sbjct: 631 DAGWQGSCLTGETVAKSRQALVDNFQNGLTAFFVCTFGAGGVGLTLTAACT-VILLDRPW 689 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R R+ G + V ++ A + +D+ + + KS +L+ Sbjct: 690 TPGD-----AHQAEDRVRRIGQTKPVKSLWMTAFD-LDKQIDSIIEQKSKTAATVLS 740 >gi|87200188|ref|YP_497445.1| helicase-like [Novosphingobium aromaticivorans DSM 12444] gi|87135869|gb|ABD26611.1| helicase-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 922 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + E K+ + + GLNLQ G ++ L W+ +Q I RI Sbjct: 753 DREDIKRGVKERKLRV-VCATDAACEGLNLQTLGTLIN-VDLPWNPSRLEQRIGRIKRYG 810 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q++ R V + L+ TIDE V QRL + + +L +L Sbjct: 811 QQR----REVDMANLVYSGTIDERVYQRLSERMQDRYDILGSL 849 >gi|283781192|ref|YP_003371947.1| helicase domain-containing protein [Pirellula staleyi DSM 6068] gi|283439645|gb|ADB18087.1| helicase domain protein [Pirellula staleyi DSM 6068] Length = 949 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 70/197 (35%), Gaps = 21/197 (10%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 DL ++A + + L +A A + + K V + + ++ ++ + I Sbjct: 434 ADLADLEENESDAAKERKRLLDMARAADKLEGDGDPKLV--QMVPIVKRLVSE--GHRPI 489 Query: 73 VAYHFNSDLARLQKAFPQG-------------RTLDKDPCTIQEWNEGKIPLLFAHPASC 119 + F + L + Q + IQE + +L Sbjct: 490 LFCRFIATAEYLAEQLRQRLPKGVTVIAVTGQIPPSEREARIQEMRNHEQYVLVCT-DCL 548 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G+NLQ+ + ++ + L W+ H+Q R+ Q + K V YY N ID + Sbjct: 549 SEGINLQHLFDSVIHYDLSWNPTRHEQREGRVDRFGQPKPEVK--VLTYYG-TDNQIDGV 605 Query: 180 VLQRLRTKSTIQDLLLN 196 VL+ L K L Sbjct: 606 VLEVLIRKHKAIRKALG 622 >gi|28867259|ref|NP_789878.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28850493|gb|AAO53573.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 801 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 13/149 (8%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL 111 DEK+ N +A H+ SD + I+ + E Sbjct: 389 PDEKVLIFTEYRTTQNYLRDALANHYGSD---QVDLINGSMQHAERREAIKRFEEQGR-- 443 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G G+NLQ +++V + L W+ Q I R+ + G K+ V V+ + Sbjct: 444 FLISTEAGGEGINLQSKCHVMVNYDLPWNPMRLVQRIGRL-----YRYGQKKKVVVFNIQ 498 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNALKK 200 +++D+ ++ + + D ++N L + Sbjct: 499 QADSLDQNIVDLMYERI---DSVVNDLAE 524 >gi|313232505|emb|CBY19175.1| unnamed protein product [Oikopleura dioica] Length = 398 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 7/62 (11%) Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA-------LKKETI 203 I R + G R V +Y IA++TI+E +L++ K + ++ + LK++ + Sbjct: 97 IHFCRAHRIGQTRDVHIYRFIAKDTIEENILKKANYKRKLGNVAIEEGRFNIEGLKEDQL 156 Query: 204 HV 205 V Sbjct: 157 RV 158 >gi|224499223|ref|ZP_03667572.1| hypothetical protein LmonF1_05832 [Listeria monocytogenes Finland 1988] Length = 966 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 42/142 (29%), Gaps = 15/142 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L E + + Q+ + E + K+ L I+ Sbjct: 828 EKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 884 Query: 65 --KANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + N I++ F L+ ++ + +NEG+ + Sbjct: 885 TARENGKRILIFSQFTGMLSIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIF 944 Query: 113 FAHPASCGHGLNLQYGGNILVF 134 + G GLNL ++ Sbjct: 945 LISLKAGGTGLNLVGADTVIFI 966 >gi|242762199|ref|XP_002340327.1| helicase, putative [Talaromyces stipitatus ATCC 10500] gi|218723523|gb|EED22940.1| helicase, putative [Talaromyces stipitatus ATCC 10500] Length = 935 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 48/148 (32%), Gaps = 17/148 (11%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD------ 95 YD + + + + N+ I+ + L + + + Sbjct: 719 YDGYFRPSGFSSKMTMLVSDLRKDMNSTKSIIFSCWTRTLDLVGEHLKSAKIKYARIDGK 778 Query: 96 ----KDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + T+ ++ + P+L + GLNL N + W+ +E Sbjct: 779 TPLSERQKTLDNFDSTREKPVLVMTFGTGAFGLNL-KSVNRVFIVEPQWNPA-----VEN 832 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 + R + G K V V + + +I+E Sbjct: 833 QAIARAIRLGQKEQVLVIKYLVKGSIEE 860 >gi|146320818|ref|YP_001200529.1| DNA methylase [Streptococcus suis 98HAH33] gi|145691624|gb|ABP92129.1| DNA methylase [Streptococcus suis 98HAH33] Length = 308 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 14 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 73 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R+ Q + V +Y+ I + + D + Q K ++ + Sbjct: 74 RNGRLIR----QGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYITQIMTS 120 >gi|297599954|ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group] gi|255671267|dbj|BAF10121.2| Os02g0762800 [Oryza sativa Japonica Group] Length = 879 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 43/150 (28%), Gaps = 9/150 (6%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-----EKHWKEVHDEKIKALEVIIE 64 + L E + + +L N + D + Sbjct: 512 KNVKRLISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFS 571 Query: 65 KANAAPIIV-AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGH 121 + + + +++K + ++N+ + + G Sbjct: 572 GRSGFVTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGC 631 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 GLNL GGN L+ F W+ +Q+ +R Sbjct: 632 GLNL-VGGNRLILFDPDWNPANDKQVYQRQ 660 >gi|260904350|ref|ZP_05912672.1| putative helicase [Brevibacterium linens BL2] Length = 1660 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 34/118 (28%), Gaps = 4/118 (3%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + ++ G + +L G G N+Q L Sbjct: 1236 RGMPGESIRFIHEAKSDIDKAQLFAAARAGHVAVLIGSTQKMGVGTNIQARAVALYHMDC 1295 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W + Q RI Q V V L+ + + D + Q + K+ ++ Sbjct: 1296 PWRPSDIAQREGRILR----QGNQNPEVGVVRLVTEKSFDAYMWQAVERKAKFISQIM 1349 >gi|118098421|ref|XP_001234820.1| PREDICTED: E1A binding protein p400 [Gallus gallus] Length = 3075 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 56/154 (36%), Gaps = 11/154 (7%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFP 89 ++ +Q +G + K + + + + + F + Sbjct: 1850 LRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQMILMLDILEL----FLNFHFLTFVRID 1905 Query: 90 QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++ ++ +N + +I S G+NL + +VF+ + ++ Sbjct: 1906 EYANHEQRQELMKSFNRDKRIFCAILSSHSRSTGVNL-VEADTVVFYDNDLNP-----VM 1959 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + G + + +Y L++ N+++E +L+ Sbjct: 1960 DAKAQEWCDRIGRCKDIHIYRLVSGNSVEEKLLK 1993 >gi|297679361|ref|XP_002817505.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 1 [Pongo abelii] Length = 1683 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1506 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1565 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1566 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1619 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1620 RIGQTKPTIVHRFLIKATIEERMQAMLK 1647 >gi|114609684|ref|XP_001172966.1| PREDICTED: SNF2 histone linker PHD RING helicase isoform 4 [Pan troglodytes] Length = 1687 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1510 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1569 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1570 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1623 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1624 RIGQTKPTIVHRFLIKATIEERMQAMLK 1651 >gi|296199407|ref|XP_002747128.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH, partial [Callithrix jacchus] Length = 1681 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1511 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1570 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1571 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1624 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1625 RIGQTKPTIVHRFLIKATIEERMQAMLK 1652 >gi|326204500|ref|ZP_08194357.1| SNF2-related protein [Clostridium papyrosolvens DSM 2782] gi|325985293|gb|EGD46132.1| SNF2-related protein [Clostridium papyrosolvens DSM 2782] Length = 890 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 71/177 (40%), Gaps = 27/177 (15%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQGRT 93 E ++ ++ ++ + I + +I+ F + L++ Sbjct: 447 EYQYVDTKAEKLLEFIYKIQMEYEDFKVIIFTEFVATQQFLKEYLESKGFKIATLNGSMD 506 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +++ T++E+ E + + G GLNLQ+ NI++ + L W+ + +Q I R+ Sbjct: 507 IEERNTTLKEFKERAD--ILISTDAGGEGLNLQF-SNIVINYDLPWNPMKIEQRIGRVD- 562 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI---------QDLLLNALKKE 201 + G +R V+V+ + T++ + + L K + +L+ E Sbjct: 563 ----RIGQQRDVYVFNFMLSETVEFRIREVLEEKLATIFEQFGVDKMEDVLDCTDAE 615 >gi|317485751|ref|ZP_07944620.1| hypothetical protein HMPREF0179_01974 [Bilophila wadsworthia 3_1_6] gi|316922984|gb|EFV44201.1| hypothetical protein HMPREF0179_01974 [Bilophila wadsworthia 3_1_6] Length = 476 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 65/217 (29%), Gaps = 26/217 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y + ++ + N ++ G V + + + +I L Sbjct: 257 LYQAVKTRFLDEINRYGLSDLNMAIFRLFSGLHAVSCG-VLPSGFLGVRRLRNRRIDTLF 315 Query: 61 VIIEKANAAPIIVAYHF------------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + + + +I+ ++ + + I W + Sbjct: 316 NELRQFRTSHVIIWANYLESVAALNEALPTAFPQIPVYTLHGRVPATERAAKIDLWKKRG 375 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L A + G+GL L + + F+S W R + G K +V Sbjct: 376 G-VLVATQGTGGYGLTLTE-SHQVFFYSENWRYALRL-----QAEDRCHRIGQKDSVCYV 428 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 L ++ DE + L K+ L LK+E + Sbjct: 429 TLQGESRFDERIRSALARKAD----ALEELKREVRRL 461 >gi|297679363|ref|XP_002817506.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 2 [Pongo abelii] Length = 1659 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1510 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1569 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1570 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1623 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1624 RIGQTKPTIVHRFLIKATIEERMQAMLK 1651 >gi|109072456|ref|XP_001086512.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 3 [Macaca mulatta] gi|109072458|ref|XP_001086641.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 4 [Macaca mulatta] Length = 1683 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1506 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1565 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1566 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1619 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1620 RIGQTKPTIVHRFLIKATIEERMQAMLK 1647 >gi|126433436|ref|YP_001069127.1| helicase domain-containing protein [Mycobacterium sp. JLS] gi|126233236|gb|ABN96636.1| helicase domain protein [Mycobacterium sp. JLS] Length = 1136 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 6/105 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + +E+ + + + + G GLNLQ +++V + L W+ +Q Sbjct: 527 HGGVRRRERRMITEEFTKNRDCQILLATDAAGEGLNLQA-AHLMVNYDLPWNPNRIEQRF 585 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI + G + ++ L+A NT + V +RL K Q Sbjct: 586 GRI-----HRIGQEEVCRLWNLVASNTREGAVFERLLQKIEEQRK 625 >gi|224165209|ref|XP_002338786.1| hypothetical protein POPTRDRAFT_795191 [Populus trichocarpa] gi|222873460|gb|EEF10591.1| hypothetical protein POPTRDRAFT_795191 [Populus trichocarpa] Length = 101 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 7/93 (7%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P L A+ G G+NL + + WW+ E +Q I+R+ Q G ++ V + Sbjct: 13 PTLLANVKVSGAGINLTA-ASEVYLMEPWWNSEFEEQAIDRV-----HQYGQEKNVIIVR 66 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLL-LNALKKE 201 LI Q++I+E +L K + + K+ Sbjct: 67 LIVQDSIEERILMMQERKKQAIEAFGMQGPKER 99 >gi|215427478|ref|ZP_03425397.1| helicase helZ [Mycobacterium tuberculosis T92] gi|289750696|ref|ZP_06510074.1| helicase helZ [Mycobacterium tuberculosis T92] gi|289691283|gb|EFD58712.1| helicase helZ [Mycobacterium tuberculosis T92] Length = 887 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 24/98 (24%), Gaps = 4/98 (4%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y ++ ++ N + K Q+ N ++ K+ LE Sbjct: 780 LYQAVVADMMEKIENTEGIERRGNVLAAMAKLKQVCNHPAQLLHDRSPVGRRSGKVIRLE 839 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 I+ + ++ F L Sbjct: 840 EILAE--GDRVLCFTQFTEFAELLVPHLAARFGRAARD 875 >gi|225021083|ref|ZP_03710275.1| hypothetical protein CORMATOL_01095 [Corynebacterium matruchotii ATCC 33806] gi|224946223|gb|EEG27432.1| hypothetical protein CORMATOL_01095 [Corynebacterium matruchotii ATCC 33806] Length = 1167 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G +++ L+ + G GLNLQ +++V + L W+ +Q Sbjct: 531 HGGTPRHLRQAIREQFTHDPRTLVLLATDAAGEGLNLQR-AHLMVNYDLPWNPNRIEQRF 589 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI + G + ++ L+A NT + V RL K + Sbjct: 590 GRI-----HRIGQREVCHLWNLVAHNTREGDVFNRLLEKIEVMSE 629 >gi|237739551|ref|ZP_04570032.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] gi|229423159|gb|EEO38206.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31] Length = 1166 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 65/217 (29%), Gaps = 40/217 (18%) Query: 3 QYHKFQ--RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE------ 54 Y K + + ++ + + + + D + + E Sbjct: 748 IYDKIKPSSQQEDIIEKLKNTGKAALAIIQGMIMTCSHPQLVDRDVDEVPLGSEESLIEE 807 Query: 55 --KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDP 98 K++ + I+ + I+ + L + Sbjct: 808 AYKLEHIYTILTEVKKKNEKAIIFTKYKKMQKILWNVIKYWFDIEVGIVNGDADKTSRRR 867 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ P + G GLN+ N ++ ++ W+ + E R + Sbjct: 868 ILDDFRKKEGFNVIILSPEAAGVGLNI-VEANHVIHYTRHWNPAK-----EEQATDRAYR 921 Query: 159 AGFKRAVFVYYLIAQN----------TIDELVLQRLR 185 G K+ V+VYY I N T+DE + ++L Sbjct: 922 IGQKKDVYVYYPIISNVERIERDEYRTVDEWIRKQLE 958 >gi|170763976|ref|ZP_02636612.2| superfamily II DNA and RNA helicase [Clostridium perfringens B str. ATCC 3626] gi|170710974|gb|EDT23156.1| superfamily II DNA and RNA helicase [Clostridium perfringens B str. ATCC 3626] Length = 477 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 34/112 (30%), Gaps = 4/112 (3%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + + + G ++ G G N+Q L + + + Sbjct: 123 CFIHDAKNEIQREKIFSDMRNGNKRIIIGSTQKMGTGTNIQDRLVSLHHLDCPYRPADLE 182 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q RI Q + V +Y +NT D + Q + K ++ + Sbjct: 183 QREGRIIR----QGNMNKEVNIYRYATKNTFDSYLWQIVEQKQKFISQIMTS 230 >gi|119026248|ref|YP_910093.1| helicase [Bifidobacterium adolescentis ATCC 15703] gi|118765832|dbj|BAF40011.1| helicase [Bifidobacterium adolescentis ATCC 15703] Length = 890 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 26/186 (13%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-- 96 E+ + K + +I +IV F + L ++ ++ Sbjct: 679 KCYEDFDLDNMKSPKFEEGLKLIRDLVNQGKKVIVWGLFVNTLQKISSRLDDSDIDNRLI 738 Query: 97 --------DPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I ++ P +L ++P + G ++LQ + V+F ++L Q Sbjct: 739 YGETPVDVRKDFIADFRNPNGPAVLVSNPQTLGESVSLQDVVHDAVYFEFNFNLTYMLQS 798 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQ-------NTIDELVLQRLRTKSTIQDLLLNA--L 198 +RI + R Y+++ ID V +RL+ K ++ L Sbjct: 799 RDRIHRLGLPDGQYTR----YHIMETINDPTEYGFIDSRVYKRLKYKERRMREAIDGDVL 854 Query: 199 KKETIH 204 K E Sbjct: 855 KPEVTD 860 >gi|308804708|ref|XP_003079666.1| SNF2 domain-containing protein / helicase domain-containing prote (ISS) [Ostreococcus tauri] gi|116058122|emb|CAL53311.1| SNF2 domain-containing protein / helicase domain-containing prote (ISS) [Ostreococcus tauri] Length = 1574 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 48/145 (33%), Gaps = 14/145 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHF--------NSDLARLQKAFPQGRTLDKD 97 W + ++ + I++ +I+ + + A +A Sbjct: 1372 GSWGTKIEAIVRRVRFILDTDERTKLIIFSEWDDVLKVVEKAIAANQVRAMRAESGPKFR 1431 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + ++G + +L GLNL ++ D +E + R Sbjct: 1432 AAVDRFKHDGTVSVLLLPMKRGAQGLNLTE-AQHVLLLEPVLDPG-----MEAQAIKRVD 1485 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQ 182 + G R V+ + ++T++E V + Sbjct: 1486 RIGQTRPTCVHRFVIRDTVEENVQK 1510 >gi|119568221|gb|EAW47836.1| SNF2 histone linker PHD RING helicase, isoform CRA_a [Homo sapiens] Length = 1687 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1510 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1569 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1570 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1623 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1624 RIGQTKPTIVHRFLIKATIEERMQAMLK 1651 >gi|301774839|ref|XP_002922838.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 2 [Ailuropoda melanoleuca] Length = 1689 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/148 (12%), Positives = 46/148 (31%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1512 GSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1571 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + + R Sbjct: 1572 ENLSAFKHDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHEL-----QAIGRVH 1625 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1626 RIGQTKPTIVHRFLIKATIEERMQAMLK 1653 >gi|281350981|gb|EFB26565.1| hypothetical protein PANDA_011861 [Ailuropoda melanoleuca] Length = 1688 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/148 (12%), Positives = 46/148 (31%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1511 GSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1570 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + + R Sbjct: 1571 ENLSAFKHDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHEL-----QAIGRVH 1624 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1625 RIGQTKPTIVHRFLIKATIEERMQAMLK 1652 >gi|109072462|ref|XP_001086276.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 1 [Macaca mulatta] Length = 1659 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1510 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1569 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1570 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1623 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1624 RIGQTKPTIVHRFLIKATIEERMQAMLK 1651 >gi|73945644|ref|XP_533438.2| PREDICTED: similar to SNF2 histone linker PHD RING helicase isoform 1 [Canis familiaris] Length = 1685 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 51/159 (32%), Gaps = 16/159 (10%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1508 GSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1567 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1568 ENLSAFKHDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1621 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR--TKSTIQDLL 194 + G + V+ + + TI+E + L+ KS + Sbjct: 1622 RIGQTKPTIVHRFLIKATIEERMQAMLKTAEKSHTSSSV 1660 >gi|154341643|ref|XP_001566773.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134064098|emb|CAM40292.1| hypothetical protein, unknown function [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1235 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 7/127 (5%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGN 130 +V Y + A G + + +++ + + + G G+NLQ + Sbjct: 776 LVDYLHSRGWADHTVVLTGGSSEAERLASVRHFREDPACLFFLISIKAGGCGINLQA-AH 834 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++V + E + R + G + V YL + +E V QR TK+ Sbjct: 835 MVVLVDRDYTATN-----EDQALARVYRIGQRHTVRAVYLATTDPSEERVAQRAATKNKP 889 Query: 191 QDLLLNA 197 ++ ++N Sbjct: 890 REAIIND 896 >gi|114609674|ref|XP_001172938.1| PREDICTED: SNF2 histone linker PHD RING helicase isoform 1 [Pan troglodytes] gi|114609676|ref|XP_001172949.1| PREDICTED: SNF2 histone linker PHD RING helicase isoform 2 [Pan troglodytes] Length = 1659 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1510 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1569 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1570 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1623 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1624 RIGQTKPTIVHRFLIKATIEERMQAMLK 1651 >gi|222636933|gb|EEE67065.1| hypothetical protein OsJ_24029 [Oryza sativa Japonica Group] Length = 969 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + D++ Q N +LF +CG G++L G + ++ + Sbjct: 815 HVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVH 873 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + R + G ++ VFVY L+A ++ + + K I Sbjct: 874 LNPSVT-----RQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 920 >gi|119568224|gb|EAW47839.1| SNF2 histone linker PHD RING helicase, isoform CRA_d [Homo sapiens] Length = 1716 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1515 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1574 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1575 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1628 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1629 RIGQTKPTIVHRFLIKATIEERMQAMLK 1656 >gi|114609678|ref|XP_001172976.1| PREDICTED: SNF2 histone linker PHD RING helicase isoform 5 [Pan troglodytes] gi|114609680|ref|XP_527525.2| PREDICTED: SNF2 histone linker PHD RING helicase isoform 6 [Pan troglodytes] Length = 1683 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1506 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1565 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1566 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1619 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1620 RIGQTKPTIVHRFLIKATIEERMQAMLK 1647 >gi|109734410|gb|AAI17687.1| SHPRH protein [Homo sapiens] Length = 1683 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1506 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1565 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1566 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1619 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1620 RIGQTKPTIVHRFLIKATIEERMQAMLK 1647 >gi|289547541|ref|NP_001036148.2| E3 ubiquitin-protein ligase SHPRH isoform a [Homo sapiens] gi|146325723|sp|Q149N8|SHPRH_HUMAN RecName: Full=E3 ubiquitin-protein ligase SHPRH; AltName: Full=SNF2, histone-linker, PHD and RING finger domain-containing helicase gi|55665328|emb|CAH70765.1| SNF2 histone linker PHD RING helicase [Homo sapiens] gi|57209105|emb|CAI41120.1| SNF2 histone linker PHD RING helicase [Homo sapiens] Length = 1683 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1506 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1565 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1566 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1619 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1620 RIGQTKPTIVHRFLIKATIEERMQAMLK 1647 >gi|32480766|gb|AAO26201.1| SNF2 histone linker PHD RING helicase [Homo sapiens] Length = 1683 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1506 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1565 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1566 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1619 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1620 RIGQTKPTIVHRFLIKATIEERMQAMLK 1647 >gi|242018235|ref|XP_002429584.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212514551|gb|EEB16846.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 657 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 71/215 (33%), Gaps = 31/215 (14%) Query: 5 HKFQRELYCDLQGE--NIEAFN---SASKTVKCLQLANGA-------VYYDEEKHWKEVH 52 + + E+ L + I N S + K Q+ + ++ Sbjct: 375 RRLKSEVLAQLPSKIRKIVILNPNMVKSVSKKMRQMESQFESQKGVEKQSTLISYYSITG 434 Query: 53 DEKIKALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPC 99 + K+ A+ I N+ +V H ++ L + + + Sbjct: 435 NAKLSAVCEYIGDKLENSNKFLVFAHHSNVLDGICDLLNNKKVDYIRIDGTVSSENRQIK 494 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + + GL L +++F L+W+ E R + Sbjct: 495 CQEFQSNPNCKVAVLSLKAANTGLTLTE-AQLVIFAELYWNPGELI-----QAEDRAHRI 548 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G + +V V YLIA+ T D+ + ++ K I + + Sbjct: 549 GQRDSVLVEYLIAKGTADDHLWSLVQLKLNILNKV 583 >gi|27436873|ref|NP_775105.1| E3 ubiquitin-protein ligase SHPRH isoform b [Homo sapiens] gi|27369406|gb|AAO06907.1| helicase-like protein [Homo sapiens] gi|119568222|gb|EAW47837.1| SNF2 histone linker PHD RING helicase, isoform CRA_b [Homo sapiens] Length = 1659 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1510 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1569 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1570 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1623 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1624 RIGQTKPTIVHRFLIKATIEERMQAMLK 1651 >gi|320104896|ref|YP_004180487.1| SNF2-like protein [Isosphaera pallida ATCC 43644] gi|319752178|gb|ADV63938.1| SNF2-related protein [Isosphaera pallida ATCC 43644] Length = 955 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ + + + + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 487 RTALIEHFRDHAT--ILLATEAAAEGINLQF-CSLVVNYDLPWNPQRIEQRIGRC----- 538 Query: 157 RQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ VL+ L K + + A Sbjct: 539 HRYGQKHDVVVINFLNERNAADQRVLELLSEKFNLFSGVFGA 580 >gi|296450799|ref|ZP_06892550.1| SNF2 family protein [Clostridium difficile NAP08] gi|296260360|gb|EFH07204.1| SNF2 family protein [Clostridium difficile NAP08] Length = 541 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G++ L A G G N+Q L + W + +Q Sbjct: 149 FIHDANTEVKKTDLFSKVKSGQVRFLLGSTAKMGAGTNVQDRLIALHHLDVGWKPSDLEQ 208 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + + T D + Q + +K ++ + Sbjct: 209 REGRIIR----QGNRNKKVHIYRYVTEGTFDSYMWQLIESKQKFISQIMTS 255 >gi|87124662|ref|ZP_01080510.1| SNF2-related Helicase [Synechococcus sp. RS9917] gi|86167541|gb|EAQ68800.1| SNF2-related Helicase [Synechococcus sp. RS9917] Length = 1113 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 47/123 (38%), Gaps = 7/123 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL---LFAHPASCGHGLNLQYGGNILVFF 135 + + +F G + + ++N + + G+NLQ L+ F Sbjct: 559 REAEQRVASFSGGMSEENRERLKAQFNADPDQEPLRILIATDAAREGVNLQNHCKHLIHF 618 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + W+ + +Q RI Q V+ +Y + ++ ++ V+ L K+ + L Sbjct: 619 DIPWNPSKLEQRNGRIDRKLQ----QAPQVWCHYFLLEDRPEDRVMDVLVKKTEVIRQEL 674 Query: 196 NAL 198 +L Sbjct: 675 GSL 677 >gi|194670154|ref|XP_594787.4| PREDICTED: helicase-like transcription factor-like [Bos taurus] gi|297478761|ref|XP_002690346.1| PREDICTED: helicase-like transcription factor-like [Bos taurus] gi|296483940|gb|DAA26055.1| helicase-like transcription factor-like [Bos taurus] Length = 1694 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 18/148 (12%), Positives = 46/148 (31%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1517 GSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1576 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + + R Sbjct: 1577 ENLSAFKYDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHEL-----QAIGRVH 1630 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1631 RIGQTKPTIVHRFLIKATIEERMQAMLK 1658 >gi|154315192|ref|XP_001556919.1| hypothetical protein BC1G_04635 [Botryotinia fuckeliana B05.10] gi|150847598|gb|EDN22791.1| hypothetical protein BC1G_04635 [Botryotinia fuckeliana B05.10] Length = 1357 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 25/226 (11%), Positives = 61/226 (26%), Gaps = 47/226 (20%) Query: 4 YHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----------- 51 Y Y L +G + + ++ + +N + + Sbjct: 710 YKNILTRNYAALNEGSKGPKQSLLNIMMELKKASNHPYMFPNAEEKILKGSERRDDQLKG 769 Query: 52 ---HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------- 97 K+ L+ ++ K + +++ L L + Sbjct: 770 LIASSGKMMLLDRLLAKLKKDNHRVLIFSQMVKMLDILGDYLQLRGYQFQRLDGTVAAGP 829 Query: 98 -PCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I +N + G G+NL + +V F W+ + + + Sbjct: 830 RRQAIDHFNADGSNDFCFLLSTRAGGLGINLMT-ADTVVIFDSDWNPQA-----DLQAMA 883 Query: 155 RQRQAGFKRA-VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 R + G K+ + + + + K +++ A K Sbjct: 884 RAHRIGQKKPFITIQRGVTD-----------KEKKELREKAAKAGK 918 >gi|154484906|ref|ZP_02027354.1| hypothetical protein EUBVEN_02624 [Eubacterium ventriosum ATCC 27560] gi|149733859|gb|EDM49978.1| hypothetical protein EUBVEN_02624 [Eubacterium ventriosum ATCC 27560] Length = 1090 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + +GKI ++ G G+N+Q L + W + Q Sbjct: 746 FAHSANTEKKRKQLFDDVRKGKIRVILGSTFKIGMGVNIQDRLIALHHIDVPWRPADMVQ 805 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI Q + V +Y I + + D Q L TK LL Sbjct: 806 REGRILR----QGNINQEVEIYRYITEGSFDAYSWQLLETKQRFISELL 850 >gi|302423432|ref|XP_003009546.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261352692|gb|EEY15120.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 539 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 17/144 (11%) Query: 65 KANAAPIIVAYHFNSDLARLQKA-----------FPQGRTLDKDPCTIQEWNEGKIPLLF 113 I+ F L + + + K E + +L Sbjct: 359 DFPKDKCIIFVQFVKTLLMTGIMLQLEGIDFVYTYGKMLSKQKSKAKNIFETEPTVKVLV 418 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 A +C GLNL N ++ WW+ QQ R+ + G + + L + Sbjct: 419 ATMGTCSEGLNLT-CANRVIVVDAWWNSAREQQSFGRV-----VRTGQCKETYCVRLKSP 472 Query: 174 NTIDELVLQRLRTKSTIQDLLLNA 197 N+ID+ + + +K+ + D + Sbjct: 473 NSIDDKIERIQTSKNEVVDCAVQD 496 >gi|154321115|ref|XP_001559873.1| hypothetical protein BC1G_01432 [Botryotinia fuckeliana B05.10] gi|150851970|gb|EDN27162.1| hypothetical protein BC1G_01432 [Botryotinia fuckeliana B05.10] Length = 855 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 11/157 (7%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR---LQKAFPQGRTLDK 96 + + K + D + + + E + IV F L AF G + Sbjct: 605 IELQDNKSFGTKIDTLARHILYLRESDPGSKSIVFSQFTEFLPVLASAFDAFRIGHSSID 664 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 P ++++ N+ I + H + GL L + + F + I G +R Sbjct: 665 RPNGVEKFKNDPGIEVFLLHSRAHSAGLTLVN-ASNIFFCEPLLNTA-----IALQGESR 718 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + G K ++ ++ NT+D+ + + L K + Sbjct: 719 VHRIGQKFETNIWVMVMGNTVDQSIYE-LSFKRRLDH 754 >gi|288561612|ref|YP_003429018.1| SNF2/RAD54 family helicase [Bacillus pseudofirmus OF4] gi|288548244|gb|ADC52126.1| SNF2/RAD54 family helicase [Bacillus pseudofirmus OF4] Length = 466 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 64/209 (30%), Gaps = 22/209 (10%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 + E I+ S ++A+ +DE + + Sbjct: 223 KEEAEKRGDKYRIQTIKICSWMDVLRKVASCPWSFDEFTSTELPAKVSYLKNKTDQYMNK 282 Query: 68 AAPIIVAYHFNSDL------------ARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLF 113 +++ + G ++ ++ + + P ++ Sbjct: 283 DQKVLIFTAHKKTAVVLAEFLSSKYPDKEAVCIHGGVKKEERFQYMERFQDPTDPLSIIV 342 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + L + F + ++ ++ QQ R + G V VY+LI Sbjct: 343 FTVRTGAESYTLTE-AKGVFIFDMDFNGKKLQQCFSR-----AVRLGQTDVVDVYWLITL 396 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 +TI+ + + +K + D+ ++ K+E Sbjct: 397 DTIEVNIHGVILSKDSGVDIAVD--KEEI 423 >gi|169608868|ref|XP_001797853.1| hypothetical protein SNOG_07519 [Phaeosphaeria nodorum SN15] gi|111063865|gb|EAT84985.1| hypothetical protein SNOG_07519 [Phaeosphaeria nodorum SN15] Length = 1274 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 8/136 (5%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPAS 118 ++II L + + + + +N + + +L A Sbjct: 1014 KIIIFYDGDNAAFYIAQCLEMLYINHRIYARTLNNVARSEYVALFNSDPDVRVLLIDVAC 1073 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLNL +I++ + IE + R + G + V V L+ +NTI+ Sbjct: 1074 GALGLNL-NAASIVLIVNPINRPS-----IEAQAIKRAHRIGQDKKVTVETLVLENTIEH 1127 Query: 179 LVLQRLRTKSTIQDLL 194 + + K + L Sbjct: 1128 AIFK-HAKKMSRAQHL 1142 >gi|331013606|gb|EGH93662.1| SNF2-related:helicase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 316 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 60/191 (31%), Gaps = 36/191 (18%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ L ++ + Sbjct: 148 QVERD---EYNQIMRSDQHRFARLGALRQL---------------LERVKVRILADLMAE 189 Query: 66 AN-AAPIIVAYHFNSDLARLQKAFPQG-----------RTLDKDPCTIQEWNEGKIPLLF 113 + +I+ + +A L++ + + + + Sbjct: 190 LDVDDKVILFCEYQESVATLREHCLKMGVGCVTLVGSDSPKKRQKAIDAFQQDPDCRVFI 249 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 250 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRVVVVKIPLAE 303 Query: 174 NTIDELVLQRL 184 +TID+ + Q L Sbjct: 304 DTIDQQLWQML 314 >gi|257091528|ref|YP_003165171.1| hypothetical protein CAP2UW1_4591 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048537|gb|ACV37724.1| hypothetical protein CAP2UW1_4591 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 1097 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 T + + +L + GLN Q+ G ++ F W+ +Q I R+ Q Sbjct: 826 REETKRRFKRQDAQVLVCT-DAAAEGLNFQFCGALVN-FDSPWNPMRIEQRIGRVDRLGQ 883 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + L+ ++T++ V + LR++ ++ ++ L+ Sbjct: 884 ----QFPRIAIVNLMYEDTVETDVYRALRSRISLFTSVVGPLQ 922 >gi|261377777|ref|ZP_05982350.1| helicase/SNF2 domain protein [Neisseria cinerea ATCC 14685] gi|269146067|gb|EEZ72485.1| helicase/SNF2 domain protein [Neisseria cinerea ATCC 14685] Length = 943 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 9/113 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +DK I + + ++ A S G+NLQ+ ++L+ + L W+ + + Sbjct: 471 PHHTGSPAVDKRTALIDAFKN-QAKIMIAT-ESAAEGVNLQF-CSLLINYDLPWNPQRIE 527 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLLNA 197 Q I R + G K V V + +N D VL+ L K + D + A Sbjct: 528 QRIGRC-----HRYGQKSDVVVINFLNTRNDADRRVLELLTDKFKLFDGVFGA 575 >gi|60544834|gb|AAX22755.1| SWI2/SNF2-like protein [Arabidopsis thaliana] Length = 698 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 37/89 (41%), Gaps = 11/89 (12%) Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+++++ + + G G+NL + + + W+ + ++ + R + Sbjct: 551 IKDFSDEKSSCSIFLLSTRAGGLGINLTA-ADTCILYDSDWNPQ-----MDLQAMDRCHR 604 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G + V VY L +I+ + L TK Sbjct: 605 IGQTKPVHVYRLSTAQSIE---IHLLSTK 630 >gi|73945646|ref|XP_861216.1| PREDICTED: similar to SNF2 histone linker PHD RING helicase isoform 3 [Canis familiaris] Length = 1575 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 51/159 (32%), Gaps = 16/159 (10%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1398 GSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1457 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1458 ENLSAFKHDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1511 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR--TKSTIQDLL 194 + G + V+ + + TI+E + L+ KS + Sbjct: 1512 RIGQTKPTIVHRFLIKATIEERMQAMLKTAEKSHTSSSV 1550 >gi|301774837|ref|XP_002922837.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like isoform 1 [Ailuropoda melanoleuca] Length = 1685 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/148 (12%), Positives = 46/148 (31%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1508 GSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1567 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + + R Sbjct: 1568 ENLSAFKHDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHEL-----QAIGRVH 1621 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1622 RIGQTKPTIVHRFLIKATIEERMQAMLK 1649 >gi|126310663|ref|XP_001370692.1| PREDICTED: similar to SNF2 histone linker PHD RING helicase [Monodelphis domestica] Length = 1686 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L+ I K A +V + L + KA + I + Sbjct: 1509 GSHSTKVEAVVRTLKRIQFKNPGAKSLVFSTWQDVLDIISKALYDNNMVFAQINGINRFQ 1568 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + KI +L + +GLN+ ++ + Q I R+ Sbjct: 1569 ENLSAFKYDPKINILLLPLHTGSNGLNI-IEATHVLLVEPILNPAHELQAIGRV-----H 1622 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1623 RIGQTKPTIVHRFLIKATIEERMQAMLK 1650 >gi|218199507|gb|EEC81934.1| hypothetical protein OsI_25800 [Oryza sativa Indica Group] Length = 969 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + D++ Q N +LF +CG G++L G + ++ + Sbjct: 815 HVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVH 873 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + R + G ++ VFVY L+A ++ + + K I Sbjct: 874 LNPSVT-----RQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 920 >gi|291540174|emb|CBL13285.1| DNA methylase [Roseburia intestinalis XB6B4] Length = 2510 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + +E GK +L CG G+N+Q + W +Q Sbjct: 2128 FIHDAKTDAQRDALFKEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHVDCPWKPSSIEQ 2187 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V +Y + + T D + K ++ + Sbjct: 2188 REGRGIR----QGNENEEVVIYRYVTKGTFDAYNWSLVENKQRFISQVMTS 2234 >gi|134114115|ref|XP_774305.1| hypothetical protein CNBG2860 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256940|gb|EAL19658.1| hypothetical protein CNBG2860 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1163 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 6/103 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L + + + + + GLNL N ++F W Sbjct: 943 LDIASTFVGHTLHVQNRRLALDYFETPGVRVCLMDLKLAARGLNLVS-ANRVIFLGPVWS 1001 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 L+ ++ + R + G R V L+ + T +E + +R Sbjct: 1002 LD-----VQAQAIKRVHRIGQTRPTLVQILVTEGTFEEDIARR 1039 >gi|148226355|ref|NP_001089668.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Xenopus laevis] gi|123903207|sp|Q498E7|SMAL1_XENLA RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|71681279|gb|AAI00246.1| Smarcal1 protein [Xenopus laevis] Length = 960 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 53/163 (32%), Gaps = 18/163 (11%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAF 88 A+ + + ++ + ++ ++ +V H L Sbjct: 718 ALLLFYNRTAEAKIRSVLEYIIDLL-ESGREKFLVFAHHKLVLDNICEELGKKEVPYIRI 776 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++ K + + GL L +++VF L+W+ Sbjct: 777 DGNTSSADRQSLCHKFQFSEKSCVAVLSITAANMGLTL-SSADLVVFAELFWNPGVLI-- 833 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 834 ---QAEDRVHRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKV 873 >gi|295675218|ref|YP_003603742.1| helicase domain protein [Burkholderia sp. CCGE1002] gi|295435061|gb|ADG14231.1| helicase domain protein [Burkholderia sp. CCGE1002] Length = 1173 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 68/202 (33%), Gaps = 28/202 (13%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 + +L+ E + + K +++ W+E+ + E+ Sbjct: 454 QTIAELEAEVVTLEHLEKKAKALR-------DGGQDRKWEELREILQNTPEMRGPDGLQR 506 Query: 70 PIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAH 115 +I+ L G D + + N+ +L A Sbjct: 507 KLIIFTEHRDTLNYLADRIRGLLGKHEAVTMIHGGTHRDDRRKVQELFRNDKDTRVLLAT 566 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 A+ G+NLQ N++V + L W+ +Q RI + G + ++ ++A T Sbjct: 567 DAAG-EGVNLQN-ANLMVNYDLPWNPNRLEQRFGRI-----HRIGQTQVCHLWNMVAAET 619 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 + V Q+L K ++ L Sbjct: 620 REGDVFQKLLEKLEVERKALGG 641 >gi|222481173|ref|YP_002567409.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222454549|gb|ACM58812.1| helicase domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 988 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 20/157 (12%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNE 106 + ++ I+ I++ + L L+ + + NE Sbjct: 481 QFIDRILSNDPDEKILIFTEYTDTLEYLRDRVFDDHDIAQVYGDLDQDRRREEMEKFENE 540 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 L + GLNLQ+ +I+V + L W+ Q + R+ + G +R V Sbjct: 541 AN---LMLATDAAQEGLNLQF-AHIMVNYDLPWNPIRIDQRMGRL-----HRYGQERTVE 591 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + L +NT + +L L K+ + L ++ + + Sbjct: 592 IRNLFFKNTRESEILNLLVEKTNQIESDLG-MRSDVL 627 >gi|86739797|ref|YP_480197.1| helicase-like protein [Frankia sp. CcI3] gi|86566659|gb|ABD10468.1| helicase-like [Frankia sp. CcI3] Length = 829 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 6/105 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + +E+ + + + + G GLNLQ +++V + L W+ +Q Sbjct: 527 HGGVRRGERRQITEEFTKNRDVQILLATNAAGEGLNLQA-AHLMVNYDLPWNPNRIEQRF 585 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI + G + ++ L+A NT + V RL K Sbjct: 586 GRI-----HRIGQDKVCRLWNLVASNTREGEVFTRLLAKLDQMRQ 625 >gi|194337162|ref|YP_002018956.1| helicase domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309639|gb|ACF44339.1| helicase domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 927 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G K + + +L A+ G+NLQ+ IL F L W+ + +Q I R Sbjct: 553 GDHGAKVAAERRFRQKDGPRVLVCT-AAGREGINLQF-SRILFNFDLPWNPMDVEQRIGR 610 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 I + G VY L+ +TI+ + L K T + + + Sbjct: 611 I-----HRYGQNYTAQVYNLVLSDTIEGRIFLMLDEKLTEIARTVGKVDDQG 657 >gi|196044225|ref|ZP_03111461.1| helicase domain protein [Bacillus cereus 03BB108] gi|196024864|gb|EDX63535.1| helicase domain protein [Bacillus cereus 03BB108] Length = 1066 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 7/157 (4%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT 100 Y E + + E I+ + + + A G + Sbjct: 469 KYQELEETLFGASGLLNHDEKILIFTESVDTLSYLEEKLLKRVPKIAKIIGSLSMEQRRK 528 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E + ++ A + G +NLQ+ N ++ + + W+ + +Q + RI + G Sbjct: 529 QVEMFRNECQIMIAT-DAGGESINLQF-CNQMINYDIPWNPNKLEQRMGRI-----HRIG 581 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K VFV+ L+AQNT + V+ +L K + L + Sbjct: 582 QKNEVFVFNLVAQNTREGSVMTKLLDKMELMKSDLGS 618 >gi|193785257|dbj|BAG54410.1| unnamed protein product [Homo sapiens] Length = 882 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 705 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 764 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 765 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 818 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 819 RIGQTKPTIVHRFLIKATIEERMQAMLK 846 >gi|254197450|ref|ZP_04903872.1| dead/deah box helicase [Burkholderia pseudomallei S13] gi|169654191|gb|EDS86884.1| dead/deah box helicase [Burkholderia pseudomallei S13] Length = 960 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 11/127 (8%) Query: 74 AYHFNSDLARLQ--KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L R + +T D ++ + E ++ A + G+NLQ+ ++ Sbjct: 469 QAIYKDWLKRHEGTDRVTGSKTADTRAALVEHFKERG-KVMIAT-EAGAEGINLQF-CSL 525 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTI 190 ++ + L W+ + +Q I R + G K V V + N D+ V + L K + Sbjct: 526 VINYDLPWNPQRIEQRIGRC-----HRYGQKHDVVVVNFVDLSNEADKRVYKLLAEKFQL 580 Query: 191 QDLLLNA 197 + + A Sbjct: 581 FEGVFGA 587 >gi|114609682|ref|XP_001172960.1| PREDICTED: SNF2 histone linker PHD RING helicase isoform 3 [Pan troglodytes] Length = 1572 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1395 GSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1454 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1455 ENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1508 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1509 RIGQTKPTIVHRFLIKATIEERMQAMLK 1536 >gi|115522588|ref|YP_779499.1| SNF2-related protein [Rhodopseudomonas palustris BisA53] gi|115516535|gb|ABJ04519.1| SNF2-related protein [Rhodopseudomonas palustris BisA53] Length = 963 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 8/100 (8%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + +L A S G+NLQ+ ++L+ F L W+ + +Q I R + Sbjct: 501 AIVNAFKSDEKTILIAT-ESGAEGINLQF-CSLLINFDLPWNPQRVEQRIGRC-----HR 553 Query: 159 AGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 G K V V ++ +N ++ + + L+ K + + L A Sbjct: 554 YGQKIDVTVVNMLNRKNQAEKRIYELLKNKFNLFEGLFGA 593 >gi|327287818|ref|XP_003228625.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Anolis carolinensis] Length = 960 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 20/151 (13%) Query: 54 EKIKALEVI---IEKANAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKDPCT 100 KI + + ++ +V H L + Sbjct: 746 AKIHCIIEYILDLLESGKEKFLVFAHHKLVLDAIAEALAKKHIGYIRIDGSTPSAERQSL 805 Query: 101 IQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 QE+ K+ + + GL L +++VF L+W+ R + Sbjct: 806 CQEFQLSEKLSVAVLSLTAANMGLTL-SSADLVVFAELFWNPGVLI-----QAEDRAHRI 859 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 G +V ++YL+A+ T D+ + ++ K + Sbjct: 860 GQTSSVNIHYLVAKGTADDYLWPMIQEKIRV 890 >gi|311243824|ref|XP_001924825.2| PREDICTED: e3 ubiquitin-protein ligase SHPRH [Sus scrofa] Length = 1685 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L I + A +V + L + KA ++ + Sbjct: 1508 GSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISRVKTFQ 1567 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + +I +L + +GL + ++ + Q I R+ Sbjct: 1568 ENLSAFKHDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV-----H 1621 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 1622 RIGQTKPTIVHRFLIKATIEERMQAMLK 1649 >gi|192292173|ref|YP_001992778.1| SNF2-related protein [Rhodopseudomonas palustris TIE-1] gi|192285922|gb|ACF02303.1| SNF2-related protein [Rhodopseudomonas palustris TIE-1] Length = 961 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 8/100 (8%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + + +L A S G+NLQ+ ++L+ F L W+ + +Q I R + Sbjct: 499 AIVNAFKSDQKTILIAT-ESGAEGINLQF-CSLLINFDLPWNPQRVEQRIGRC-----HR 551 Query: 159 AGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 G K V V ++ +N ++ + + L+ K + + L A Sbjct: 552 YGQKIDVTVVNMLNRKNQAEKRIYELLKNKFNLFEGLFGA 591 >gi|304310478|ref|YP_003810076.1| helicase/ type iii restriction enzyme [gamma proteobacterium HdN1] gi|301796211|emb|CBL44417.1| helicase/ type iii restriction enzyme [gamma proteobacterium HdN1] Length = 973 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 11/127 (8%) Query: 74 AYHFNSDLARLQ--KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L R +T D ++ + E ++ A + G+NLQ+ ++ Sbjct: 478 QVIYKDWLKRHAGTDYVTGSKTADTRAALVEHFKERGT-VMIAT-EAGAEGINLQF-CSL 534 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTI 190 ++ + L W+ + +Q I R + G K V V + + N D V + L K + Sbjct: 535 VINYDLPWNPQRIEQRIGRC-----HRYGQKYDVVVVNFVDRSNEADARVYELLEQKFQL 589 Query: 191 QDLLLNA 197 D + A Sbjct: 590 FDGVFGA 596 >gi|291299114|ref|YP_003510392.1| helicase domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290568334|gb|ADD41299.1| helicase domain protein [Stackebrandtia nassauensis DSM 44728] Length = 1137 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 8/106 (7%) Query: 89 PQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + +E+ +L A + G GLNLQ +++V + L W+ +Q Sbjct: 527 HGGVRRGERRQITEEFTQNSDCQILIAT-DAAGEGLNLQA-AHLMVNYDLPWNPNRIEQR 584 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI + G + ++ ++A NT + V RL K + Sbjct: 585 FGRI-----HRIGQEEVCRLWNIVASNTREGEVFTRLLEKISEMGR 625 >gi|196048388|ref|ZP_03115564.1| SNF2 family protein [Bacillus cereus 03BB108] gi|196020821|gb|EDX59552.1| SNF2 family protein [Bacillus cereus 03BB108] Length = 2366 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 49/176 (27%), Gaps = 22/176 (12%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK--- 86 +K N K K +I + P ++ ++ R Sbjct: 1695 MKLKACCN--------KVHSVWQASKENKSTQMIFSDSGTPKTGQFNVYDEIKRQLIEKG 1746 Query: 87 -------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 +T + + +G + +L + G G N+Q + W Sbjct: 1747 IPENEIAFIHDAKTDKQRDVLFDKVRKGDVRVLLGSTSKVGTGTNVQDKLLAVHHIDCPW 1806 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + Q RI Q V +Y + +N+ D + Q K ++ Sbjct: 1807 RPSDLTQRDGRIVR----QGNENSEVQIYRYVTKNSFDSYLWQIQEQKLKYITQVM 1858 >gi|115467422|ref|NP_001057310.1| Os06g0255700 [Oryza sativa Japonica Group] gi|52076415|dbj|BAD45245.1| putative DNA repair protein [Oryza sativa Japonica Group] gi|52077256|dbj|BAD46298.1| putative DNA repair protein [Oryza sativa Japonica Group] gi|113595350|dbj|BAF19224.1| Os06g0255700 [Oryza sativa Japonica Group] Length = 946 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + D++ Q N +LF +CG G++L G + ++ + Sbjct: 795 HVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVH 853 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + R + G ++ VFVY L+A ++ + + K I Sbjct: 854 LNPSVT-----RQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 900 >gi|309791574|ref|ZP_07686071.1| SNF2-related helicase [Oscillochloris trichoides DG6] gi|308226395|gb|EFO80126.1| SNF2-related helicase [Oscillochloris trichoides DG6] Length = 1093 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 9/106 (8%) Query: 97 DPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + +N + +L A + GLN Q L F L W+ +Q RI Sbjct: 589 RQEIQRRFNADPAEEPLRILLAT-DAAREGLNFQAHCADLFHFDLPWNPGRIEQRNGRID 647 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q V +Y + +++ VL+ L K+ L +L Sbjct: 648 RKLQPAP----EVRCHYFVLPQRVEDRVLEVLVKKTETIKRELGSL 689 >gi|295669226|ref|XP_002795161.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226285095|gb|EEH40661.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 1282 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 51/144 (35%), Gaps = 10/144 (6%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCG 120 I + L + + + +N + + +L Sbjct: 945 IFYEEGGNSGWYIAEALEILGVEFRIYSNTLKTSDRSAYLALFNTTELVRVLLMDLRQAS 1004 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGL++ + + + WD +E + R + + V+V L+ +NT+++ + Sbjct: 1005 HGLDI-PCASRVFIVNPIWDP-----NVESQAIKRAHRISQGKPVYVETLVLKNTLEDKM 1058 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 LQR + + D L +K+ + Sbjct: 1059 LQR---RKQMSDAELRHAEKDPLD 1079 >gi|293392002|ref|ZP_06636336.1| putative DEAD/DEAH box helicase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952536|gb|EFE02655.1| putative DEAD/DEAH box helicase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 958 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 11/124 (8%) Query: 77 FNSDLARLQ--KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + L R + +T D ++ + E + + G+NLQ+ ++++ Sbjct: 472 YKDWLKRHKGSDKITGSKTADTRAALVEHFKERGT--IMIATEAGAEGINLQF-CSLIIN 528 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDL 193 + L W+ + +Q I R + G K V V + + N D+ V + L K + + Sbjct: 529 YDLPWNPQRVEQRIGRC-----HRYGQKHDVVVVNFVDETNEADQRVYELLEQKFQLFNG 583 Query: 194 LLNA 197 + A Sbjct: 584 VFGA 587 >gi|218197913|gb|EEC80340.1| hypothetical protein OsI_22411 [Oryza sativa Indica Group] Length = 949 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + D++ Q N +LF +CG G++L G + ++ + Sbjct: 795 HVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVH 853 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + R + G ++ VFVY L+A ++ + + K I Sbjct: 854 LNPSVT-----RQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 900 >gi|313115790|ref|ZP_07801236.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310621890|gb|EFQ05399.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 605 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G + +L A G G N+Q + + W + Q Sbjct: 223 FIHNADTEAKKAALFSKVRSGDVRVLLGSTAKMGAGTNVQSRLVAVHHLDVGWKPSDMTQ 282 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V V+ + + T D + Q L K ++ + Sbjct: 283 RNGRIIR----QGNMNKEVKVFNYVTEGTFDSYLFQTLENKQRFISQIMTS 329 >gi|311261056|ref|XP_003128623.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Sus scrofa] Length = 1278 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 21/170 (12%), Positives = 49/170 (28%), Gaps = 26/170 (15%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHW---------KE 50 K Y + + L + N + ++ + N + E Sbjct: 323 KYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGEGPPGTHDFHLQAMV 382 Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DP 98 K+ ++ ++ K +++ L L+ Q R L + Sbjct: 383 RSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQ 442 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I +++ + + G G+NL + + F W+ + Q Sbjct: 443 AAIDRFSKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQNDLQ 491 >gi|328848688|gb|EGF97890.1| hypothetical protein MELLADRAFT_84184 [Melampsora larici-populina 98AG31] Length = 420 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 20/202 (9%), Positives = 62/202 (30%), Gaps = 27/202 (13%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL- 84 + N + + + + + ++ I +E + I + Sbjct: 204 FKQLTNLRMTCNHPLLFRQIEQGVDAENQPINLIEQKLGIKLPDERIHNSKVRDAIPTDW 263 Query: 85 ---------QKAFPQGRTLDKDPCTI----QEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + ++ I + + + + H + Q + Sbjct: 264 KLSPKIADLVHMLQKKKSHGGGKSVIYTQWKSFIDCICRINRGWWGRFEHDMCGQGLFDA 323 Query: 132 LVFF-SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +V+ W+ + QQ ++R+ + G + V V++++ +I++ + + K+ Sbjct: 324 VVYLQDAHWNPQVVQQAVDRL-----HRIGQAKPVRVFHVVTVQSIEQHLYNVQKRKAAR 378 Query: 191 QDLLL-------NALKKETIHV 205 ++ K E + V Sbjct: 379 AKRVITLTVPTEELEKAEALRV 400 >gi|325089926|gb|EGC43236.1| SNF2 family helicase [Ajellomyces capsulatus H88] Length = 1211 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 51/146 (34%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPAS 118 ++II L + + + +NE + +L Sbjct: 933 KIIIFYEGNNTGFYIAEGLELLGVEFRIYANTLKTKTRSEYLSLFNETETVRVLLMDLRQ 992 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + WD E + R + + V+V L+ + T+++ Sbjct: 993 AAHGLHI-ACASRVFIVNPIWDP-----NFESQAIKRAHRISQNKPVYVETLVLKGTLED 1046 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L+R + + + L +K+ + Sbjct: 1047 RMLRR---RKQMSNAELRHAEKDPLD 1069 >gi|305680870|ref|ZP_07403677.1| helicase C-terminal domain protein [Corynebacterium matruchotii ATCC 14266] gi|305659075|gb|EFM48575.1| helicase C-terminal domain protein [Corynebacterium matruchotii ATCC 14266] Length = 1168 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G +++ L+ + G GLNLQ +++V + L W+ +Q Sbjct: 532 HGGTPRHLRQAIREQFAHDPRTLVLLATDAAGEGLNLQR-AHLMVNYDLPWNPNRIEQRF 590 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI + G + ++ L+A NT + V RL K + Sbjct: 591 GRI-----HRIGQREVCHLWNLVAHNTREGDVFNRLLEKIEVMSE 630 >gi|222635335|gb|EEE65467.1| hypothetical protein OsJ_20857 [Oryza sativa Japonica Group] Length = 949 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + D++ Q N +LF +CG G++L G + ++ + Sbjct: 795 HVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVH 853 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + R + G ++ VFVY L+A ++ + + K I Sbjct: 854 LNPSVT-----RQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 900 >gi|134298387|ref|YP_001111883.1| helicase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134051087|gb|ABO49058.1| helicase domain protein [Desulfotomaculum reducens MI-1] Length = 942 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 11/124 (8%) Query: 77 FNSDLARLQKAFPQ--GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 F L R Q T D I+E+ E + S G+NLQ+ +++V Sbjct: 460 FKEWLQRHQGQDIITGSPTADMRAALIEEFRERGT--ILIATESAAEGVNLQF-CSLVVN 516 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDL 193 + L W+ + +Q I R + G K V V + + N D+ V Q L K + D Sbjct: 517 YDLPWNPQRIEQRIGRC-----HRYGQKYDVVVVNFLNKRNAADQRVYQLLAEKFRLFDG 571 Query: 194 LLNA 197 + A Sbjct: 572 VFGA 575 >gi|148262671|ref|YP_001229377.1| helicase domain-containing protein [Geobacter uraniireducens Rf4] gi|146396171|gb|ABQ24804.1| helicase domain protein [Geobacter uraniireducens Rf4] Length = 955 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 9/108 (8%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ D+ I+ + + + + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 487 SKSADRRNALIEHFRDHAS--IMIATEAAAEGVNLQF-CSLVVNYDLPWNPQRIEQRIGR 543 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V + + N D+ V + L K + + A Sbjct: 544 C-----HRYGQQHDVVVINFLNERNEADQRVYELLTAKFNLFSGVFGA 586 >gi|172039234|ref|YP_001805735.1| hypothetical protein cce_4321 [Cyanothece sp. ATCC 51142] gi|171700688|gb|ACB53669.1| hypothetical protein cce_4321 [Cyanothece sp. ATCC 51142] Length = 1072 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 65/168 (38%), Gaps = 17/168 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GR 92 + + + E I+ L+ + + ++ + + L L + + Sbjct: 537 DLRKHDTKYQELIQCLKQKLAENPKEKFVLFAFYRNTLTYLAERLQEDGIEICLILGGMD 596 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 DK + +I +L + G++LQ+ L+ + L W+ +Q I R+ Sbjct: 597 KEDKQDKLKSFQDNNQISVLLSS-EVGSEGIDLQF-CRFLINYDLPWNPMRVEQRIGRLD 654 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q+ + + ++TI+E +L+RL + I + + L++ Sbjct: 655 RLNQK----SETISIINFSLKDTIEEYILERLYERIHIFEESIGDLEE 698 >gi|145347826|ref|XP_001418362.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578591|gb|ABO96655.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1432 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 6/98 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +L HGLNL ++ D +E + R Sbjct: 1286 RDVIDTFKHDAACNVLLLPLKRGAHGLNLTE-AQHVLLLEPVLDPG-----MEAQAIKRV 1339 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G R V+ ++TI+E V R ++ + Sbjct: 1340 DRIGQTRPTCVHRFFIRDTIEENVHNFSRQRADAMSDI 1377 >gi|196035256|ref|ZP_03102662.1| helicase domain protein [Bacillus cereus W] gi|195992320|gb|EDX56282.1| helicase domain protein [Bacillus cereus W] Length = 1063 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 7/157 (4%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT 100 Y E + + E I+ + + + A G + Sbjct: 469 KYQELEETLFGASGLLNHDEKILIFTESVDTLSYLEEKLLKRVPKIAKIIGSLSMEQRRK 528 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E + ++ A + G +NLQ+ N ++ + + W+ + +Q + RI + G Sbjct: 529 QVEMFRNECQIMIAT-DAGGESINLQF-CNQMINYDIPWNPNKLEQRMGRI-----HRIG 581 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K VFV+ L+AQNT + V+ +L K + L + Sbjct: 582 QKNEVFVFNLVAQNTREGSVMTKLLDKMELMKSDLGS 618 >gi|50550555|ref|XP_502750.1| YALI0D12562p [Yarrowia lipolytica] gi|49648618|emb|CAG80938.1| YALI0D12562p [Yarrowia lipolytica] Length = 1098 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + ++ + + +L + + HGLN+ + + F S Sbjct: 897 HLIYTTDKVSKERRAQYLATFEATDNFQVLLMNINAAAHGLNITS-ASWVFFLSP----- 950 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 ++ IE + R + G K V V L+ Q+T++E + +R Sbjct: 951 VWRRDIEAQAIKRAHRIGQKSEVHVETLVLQDTLEEDIYRR 991 >gi|303283812|ref|XP_003061197.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226457548|gb|EEH54847.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 1429 Score = 56.3 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 53/170 (31%), Gaps = 35/170 (20%) Query: 30 VKCLQLANGAVYYDEEKHWKEVHDE--------KIKALEVIIEK--ANAAPIIVAYHFNS 79 ++ +L N E K+ L+ ++ K A+ +++ Sbjct: 844 MELRKLCNHPALNYPIAKGGEWRSGPDLVRAGGKLWVLDRVLVKLRASGHRVLLFSTMTK 903 Query: 80 DLARLQKAFPQ-----------------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCG 120 L L+ LD+ I ++NE L + G Sbjct: 904 LLDLLEDYLKWRASTPICEGLEWCRIDGTTPLDEREVAITQFNERDSKKFLFLLSIRAAG 963 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 GLNLQ + +V + + + E V R + G KR V V + Sbjct: 964 RGLNLQT-ADTVVVYDPDPNPKN-----EEQAVARSHRIGQKREVKVMHF 1007 >gi|115453047|ref|NP_001050124.1| Os03g0352500 [Oryza sativa Japonica Group] gi|113548595|dbj|BAF12038.1| Os03g0352500 [Oryza sativa Japonica Group] Length = 214 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 29/44 (65%) Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G + V VY LI ++TI+E +LQR + K+ +Q+L++ Sbjct: 1 AMDRTHRLGQTKEVTVYRLICKDTIEEKILQRAKQKNAVQELVM 44 >gi|34394721|dbj|BAC84084.1| putative SNF2 domain/helicase domain-containing protein [Oryza sativa Japonica Group] Length = 872 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + D++ Q N +LF +CG G++L G + ++ + Sbjct: 721 HVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVH 779 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + R + G ++ VFVY L+A ++ + + K I Sbjct: 780 LNPSVT-----RQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 826 >gi|146344261|ref|YP_001202117.1| putative helicase [Pseudomonas fluorescens SBW25] gi|146188073|emb|CAM96403.1| putative helicase [Pseudomonas fluorescens SBW25] Length = 554 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 6/123 (4%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD-PCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 V +N +LA+ G K + + + G+ +L S LQ Sbjct: 399 GWHRAVYDIWNEELAQWNPVMYTGSESPKQKEESKRRFLAGESNVLILSLRSGAGLDGLQ 458 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++++ L W + H+ R + G V +L++++ D +++ L Sbjct: 459 ARCSVVLHGELDWSPKVHE-----QVTGRLDREGQPNPVLSIFLVSEDGSDPPIIELLGV 513 Query: 187 KST 189 K+ Sbjct: 514 KAA 516 >gi|328875307|gb|EGG23672.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1175 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 46/140 (32%), Gaps = 7/140 (5%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE 106 K + K+ L +++ I + + + + + Sbjct: 957 QPKLIDSSKLDYLIKRLQELEK-KGIKLMAMKHAKLNFLQYHSNMKLKKRAMAILSFQTD 1015 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + + +G+NL N ++F + ER + R + G V Sbjct: 1016 SQQHFIVMNTDLAAYGINLTA-ANHIIFVDQLTS-----EGKERQAIKRAHRIGQLNPVS 1069 Query: 167 VYYLIAQNTIDELVLQRLRT 186 V LI NTI++++L L Sbjct: 1070 VEKLIIPNTIEQMILSTLNH 1089 >gi|145481069|ref|XP_001426557.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393632|emb|CAK59159.1| unnamed protein product [Paramecium tetraurelia] Length = 746 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 7/125 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + ++++ +Q N I + S +G+ L + +VF Sbjct: 440 YCVENNIQYMRIDGSVSIEQRHLNVQMFQNNEAIRIAILSVTSANYGITLTA-ASTIVFG 498 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + W R + G + V +YLI T+D+ + ++ K + Sbjct: 499 EMHWTPAIMM-----QAEDRAHRIGQVQCVDCHYLIGDGTLDDHIFNKIENKMNTVSNFI 553 Query: 196 NALKK 200 + K+ Sbjct: 554 DGQKQ 558 >gi|219118546|ref|XP_002180043.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408300|gb|EEC48234.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 140 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 5/78 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ + G GLNL + + WW+ + Q + RI Q V V Sbjct: 66 VMLMSMGAGGEGLNLVA-ASSVFIADPWWNAAKEDQCVNRIHRIGQLSPV----VRVRKF 120 Query: 171 IAQNTIDELVLQRLRTKS 188 + ++++E +++ K Sbjct: 121 VVTDSVEERIVELQSRKK 138 >gi|328876957|gb|EGG25320.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 1814 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 52/143 (36%), Gaps = 16/143 (11%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD---------PCTIQEWNEGKIP 110 I +K +I+ ++ L + +A + + + + I Sbjct: 1656 LCIFDKDPLQKVILFSQWSEVLEIVSRALAENGIVFERGDKGGQQFQASVALFRKDPTIQ 1715 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L +GLN+ + + +E + R + G ++ +++ Sbjct: 1716 VLLLPTKRGANGLNI-IEATHVFIVEPLLNPA-----VEAQAINRIHRFGQQKECYIHRF 1769 Query: 171 IAQNTIDELVLQRLRTKSTIQDL 193 I +NTI+E ++Q LR K+ Q Sbjct: 1770 IIKNTIEEKIVQ-LREKNNNQSD 1791 >gi|328953052|ref|YP_004370386.1| helicase domain protein [Desulfobacca acetoxidans DSM 11109] gi|328453376|gb|AEB09205.1| helicase domain protein [Desulfobacca acetoxidans DSM 11109] Length = 1309 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 6/115 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + + + +I +L + GLNLQ G ++L+ F L W+ Sbjct: 836 QYIDPKTFTLVGVEREEIKRRFLRSEIDILVCT-DAAAEGLNLQ-GADLLINFDLPWNPM 893 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +Q I RI Q+ V+V L + +E+V RL ++ + L++ Sbjct: 894 KVEQRIGRIDRIGQK----YETVYVLNLCYAGSAEEIVYGRLLSRLSQIGLIVGG 944 >gi|225559892|gb|EEH08174.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] gi|225559942|gb|EEH08224.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR] Length = 1209 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 52/146 (35%), Gaps = 10/146 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPAS 118 ++II L + + + +NE + +L Sbjct: 933 KIIIFYEGNNTGFYIAEGLELLGVEFRIYANTLKTKTRSEYLSLFNETETVRVLLMDLRQ 992 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + WD E + R + + V+V L+ ++T+++ Sbjct: 993 AAHGLHI-ACASRVFIVNPIWDP-----NFESQAIKRAHRISQNKPVYVETLVLKDTLED 1046 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIH 204 +L+R + + + L +K+ + Sbjct: 1047 RMLRR---RKQMSNAELRHAEKDPLD 1069 >gi|109100917|ref|XP_001086469.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 isoform 2 [Macaca mulatta] gi|109100919|ref|XP_001086594.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 isoform 3 [Macaca mulatta] Length = 949 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 61/180 (33%), Gaps = 18/180 (10%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF---- 77 A + K Q A+ + + I+ + ++ ++ +V H Sbjct: 675 AAKEMTTMDKTKQQQKDALILFFNRTAEAKIPSVIEYILDLL-ESGREKFLVFAHHKVVL 733 Query: 78 ---NSDLARLQKAFPQ---GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGN 130 +L R + + + Q++ + + + GL + Sbjct: 734 DAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF-SSAD 792 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++VF L+W+ R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 793 LVVFAELFWNPGVLI-----QAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 847 >gi|70944659|ref|XP_742238.1| DNA helicase [Plasmodium chabaudi chabaudi] gi|56521100|emb|CAH78659.1| DNA helicase, putative [Plasmodium chabaudi chabaudi] Length = 437 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 7/145 (4%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 ++ + + F + +DK I+ + + KI + +CG Sbjct: 191 LLFCHHKLVMDEIDEFLKEKKLGFIRVDGLTPIDKREVYIKNFQSDEKIRIAILSITACG 250 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNL N +VF L+W + Q +R + ++YL+AQNTIDE+V Sbjct: 251 VGLNLTA-ANTVVFGELYWVPGQMIQAEDRAHRIGTTHD----TINIHYLVAQNTIDEVV 305 Query: 181 LQRLRTKSTIQDLLLNALKKETIHV 205 + + K LN +++++V Sbjct: 306 WKIINRKWNTLTTALNG-AEDSLNV 329 >gi|255947902|ref|XP_002564718.1| Pc22g06920 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591735|emb|CAP97980.1| Pc22g06920 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1292 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 12/149 (8%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDL----ARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 K + + II + DL R + + K ++ Sbjct: 986 KFEKTDKIIIFYEHDNVAAWVEQGLDLIAVKFRTYASTASMGSNLKSENLSDFRQTHEVR 1045 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L HGL++ + + + ++ +E + R + G KR V+V L Sbjct: 1046 VLLMSVKEASHGLHIPEASRMYIV-----NP-IWERNVESQAIKRAHRIGQKRPVYVETL 1099 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +T++ +L R +K+ + +A K Sbjct: 1100 VLGDTLEHRMLNR--SKNMTDEETKHAGK 1126 >gi|302757351|ref|XP_002962099.1| hypothetical protein SELMODRAFT_76516 [Selaginella moellendorffii] gi|300170758|gb|EFJ37359.1| hypothetical protein SELMODRAFT_76516 [Selaginella moellendorffii] Length = 616 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + N K+ + G GL L + ++F + W + Sbjct: 523 PVIRQSMVDKFQNNEKVRAAVLSIRAAGLGLTLTS-ASTVIFAEMSWTPGDLI-----QA 576 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 R + G + +V +YYL A +TID+ + Sbjct: 577 EDRAHRIGQRSSVNIYYLHAPDTIDDFIW 605 >gi|229824154|ref|ZP_04450223.1| hypothetical protein GCWU000282_01458 [Catonella morbi ATCC 51271] gi|229786508|gb|EEP22622.1| hypothetical protein GCWU000282_01458 [Catonella morbi ATCC 51271] Length = 398 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 70/203 (34%), Gaps = 38/203 (18%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y ++ + N AN ++K+ +E+ Sbjct: 216 KEYKTLRKTRVL----NDEAFDNIPKLIHGLRYWAN--------------QEDKLSYIEM 257 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI----------QEWNEGKIPL 111 +++ N +I+ Y + + RL L K + W K + Sbjct: 258 LLQGTNRN-VIIFYQYKEEYERL---HEIALKLGKQIYVVNGKASHLPPRDIWQSLKSSV 313 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 S G+ LQY + +VF++ + ++++Q + R + G + V VY Sbjct: 314 TLVQYQSGSSGIELQY-ASEVVFYTPTYSYQDYEQSLGR-----AYRNGQTKKVTVYQFE 367 Query: 172 AQNTIDELVLQRLRTKSTIQDLL 194 Q+TI+ V + L K L Sbjct: 368 TQHTIESEVWEALANKKDFSTQL 390 >gi|221068880|ref|ZP_03544985.1| helicase domain protein [Comamonas testosteroni KF-1] gi|220713903|gb|EED69271.1| helicase domain protein [Comamonas testosteroni KF-1] Length = 929 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 6/104 (5%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +++ P + A+ GLNLQ+ IL F L W+ + +Q I RI QR Sbjct: 564 AAERKFRLKDGPRVLVCTAAGREGLNLQF-ARILFNFDLPWNPMDMEQRIGRIHRYGQRD 622 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 VY L+ +TI+ + L K T + + + Sbjct: 623 TAQ-----VYNLVLSDTIEGRIFLLLDEKLTEIARTVGKVDDQG 661 >gi|302387900|ref|YP_003823722.1| helicase domain protein [Clostridium saccharolyticum WM1] gi|302198528|gb|ADL06099.1| helicase domain protein [Clostridium saccharolyticum WM1] Length = 2632 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + ++ G+I +L G G+N+Q L + W + Q Sbjct: 2119 FIHDAKTDVQREQLFEKVRTGEIRILMGSTGKMGTGMNVQNKLVALHHLDVPWRPSDLIQ 2178 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI Q + ++ I +NT D + Q L K ++ Sbjct: 2179 RNGRILR----QGNDNEEISIFNYITENTFDAYLWQILEQKQRYISQIM 2223 >gi|328849288|gb|EGF98471.1| hypothetical protein MELLADRAFT_95638 [Melampsora larici-populina 98AG31] Length = 244 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 16/128 (12%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 + I+ A I + + D+ T ++ + N+ I Sbjct: 61 WRCCMEWIKIALDCHGIGSGTLHGDMT----------THERTCQLNRFKNDNNIEAFIVS 110 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + G GLN+ + + W+ + QQ I+R+ + G V VY+++A + Sbjct: 111 IEAGGVGLNMT-CADEVYLMDAHWNPQIVQQAIDRL-----HRIGQTHPVKVYHVVAGQS 164 Query: 176 IDELVLQR 183 +++ + Sbjct: 165 VEQHLFNV 172 >gi|291526662|emb|CBK92248.1| DNA methylase [Eubacterium rectale M104/1] Length = 2550 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + +E GK +L CG G+N+Q + W +Q Sbjct: 2168 FIHDAKTDAQRDALFKEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHVDCPWKPSSIEQ 2227 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V +Y + + T D + K ++ + Sbjct: 2228 REGRGIR----QGNENEEVAIYRYVTKGTFDAYNWSLIENKQRFISQVMTS 2274 >gi|328854834|gb|EGG03964.1| hypothetical protein MELLADRAFT_89789 [Melampsora larici-populina 98AG31] gi|328855578|gb|EGG04704.1| hypothetical protein MELLADRAFT_88629 [Melampsora larici-populina 98AG31] gi|328856061|gb|EGG05184.1| hypothetical protein MELLADRAFT_88297 [Melampsora larici-populina 98AG31] gi|328859055|gb|EGG08165.1| hypothetical protein MELLADRAFT_84940 [Melampsora larici-populina 98AG31] Length = 244 Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 41/118 (34%), Gaps = 14/118 (11%) Query: 74 AYHFNSDLARLQKAFPQG--------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 F + G T ++ + N+ I + G GLN+ Sbjct: 61 WRCFMEWIKIALDCHGIGSGTLHGDMTTHERTCQLNRFKNDNNIEAFIVSIEAGGVGLNM 120 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + + W+ + QQ I+R+ + G V VY+++A ++++ + Sbjct: 121 T-CADEVYLMDAHWNPQIVQQAIDRL-----HRIGQTHPVKVYHVVAGQSVEQHLFNV 172 >gi|301321575|gb|ADK68965.1| Superfamily II DNA/RNA helicase, SNF2 family [Gordonia sp. KTR9] Length = 1136 Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 6/105 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + +E+ + + + + G GLNLQ +++V + L W+ +Q Sbjct: 527 HGGVRRGERRVITEEFTKNRDVQILIATDAAGEGLNLQA-AHLMVNYDLPWNPNRIEQRF 585 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI + G + ++ L+A NT + V RL K Sbjct: 586 GRI-----HRIGQEEVCRLWNLVASNTREGEVFTRLLEKLDQMRQ 625 >gi|289618275|emb|CBI54999.1| unnamed protein product [Sordaria macrospora] Length = 1110 Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 6/102 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 FN + + + + + + ++ + G GLNL + + Sbjct: 971 FNDVGIIFTRLDGKMTRTARTAAMDKFREDPSVQVILVSIMAGGLGLNLTT-ASSVYVME 1029 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 ++ Q ++R+ + G KR V I N+ +E Sbjct: 1030 PQFNPAAEAQAVDRV-----HRLGQKRPVRTVRYIMANSFEE 1066 >gi|313115788|ref|ZP_07801235.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310621895|gb|EFQ05403.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 881 Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G + +L A G G N+Q + + W + Q Sbjct: 496 FIHNADTEAKKAALFSKVRSGDVRVLLGSTAKMGAGTNVQSQLVAVHHLDVGWKPSDMTQ 555 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V V+ + + T D + Q L K ++ + Sbjct: 556 RNGRIIR----QGNMNKEVKVFNYVTEGTFDSYLFQTLENKQRFISQIMTS 602 >gi|171691588|ref|XP_001910719.1| hypothetical protein [Podospora anserina S mat+] gi|170945742|emb|CAP71855.1| unnamed protein product [Podospora anserina S mat+] Length = 381 Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 7/99 (7%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + I + IP+L S GL + N++ Sbjct: 281 ECSLPFLRIDGMVNATDRTAIIDNFSTNPDIPVLLLTINSGAVGLTITA-ANVVHLVEPI 339 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 ++ IE V R + G R V + + + TI+ Sbjct: 340 YNPA-----IEAQAVARVLRMGQTRPVKILRYVTEETIE 373 >gi|260818236|ref|XP_002604289.1| hypothetical protein BRAFLDRAFT_125252 [Branchiostoma floridae] gi|229289615|gb|EEN60300.1| hypothetical protein BRAFLDRAFT_125252 [Branchiostoma floridae] Length = 1645 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 18/156 (11%) Query: 40 VYYDEEKHWKEVHDEKI----KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 E+ K H K+ + L++I +K A +V + L + A + Sbjct: 1425 AKQQEDVDVKGSHSTKVEAVVRTLKLIRQKDPTAKSLVFSTWQDVLDVVATALRENNMEY 1484 Query: 96 KDPCTIQEWN--------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + I + + I +L + HGLN+ ++ + + Sbjct: 1485 RAINGIHRFQENITDFKYDSGIGVLLLPLHTGSHGLNI-IEATHVLLVEPIINPAQ---- 1539 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 E + R + G +A V+ + QNTI+E + Sbjct: 1540 -EAQAIGRVHRIGQTKATVVHRFLVQNTIEERIHAM 1574 >gi|222624012|gb|EEE58144.1| hypothetical protein OsJ_09059 [Oryza sativa Japonica Group] Length = 822 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 27/230 (11%), Positives = 70/230 (30%), Gaps = 54/230 (23%) Query: 2 KQY-HKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------EKHWKEV 51 K Y ++EL G + + ++ + ++ + E Sbjct: 308 KLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEPEPYVEGEHLVQ 367 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------------ 97 K+ L++I++K + +++ L LQ + + Sbjct: 368 ASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFA 427 Query: 98 ----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +++ N+ + + G GLNL G + ++F+ W+ + Sbjct: 428 AIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNL-IGADTVIFYEQDWNPQA---- 482 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ + R + G V +++R K + ++ Sbjct: 483 -DKQALQRAHRIGQLNNV--------------IMRRAERKLKLSHSVIGE 517 >gi|222622622|gb|EEE56754.1| hypothetical protein OsJ_06290 [Oryza sativa Japonica Group] Length = 148 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 7/97 (7%) Query: 95 DKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D + ++N +LF +CG G++L G + ++ + + R + Sbjct: 9 DDREVAMDQFNNSADAKVLFGSIKACGEGISL-VGASRVIILDVHLNPSVT-----RQAI 62 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G ++ VFVY L+A ++ + + K I Sbjct: 63 GRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVI 99 >gi|75812876|ref|YP_320493.1| helicase-like [Anabaena variabilis ATCC 29413] gi|75705632|gb|ABA25304.1| Helicase-like protein [Anabaena variabilis ATCC 29413] Length = 840 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 7/114 (6%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPL---LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 F G + ++ +N + + G+NLQ L F + W+ Sbjct: 318 FHGGMSEERREAIKLAFNTDPSRHPLRILIATDAAREGVNLQNNCADLFHFDVPWNPSRM 377 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 +Q RI QR V YY ++ VL L K+ L +L Sbjct: 378 EQRNGRIDRKLQRSPI----VRCYYFALPQRAEDRVLDILIKKTATIQKELGSL 427 >gi|260666103|gb|ACX47901.1| Dbuz/Dlh [Drosophila buzzatii] Length = 517 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 66/236 (27%), Gaps = 57/236 (24%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY--------------------- 41 Y+K + + DL E + +T + QL + Sbjct: 268 LYNKVRSK--LDLCVETRTMIH-LVRTQRLQQLCSHPYLIRSLNIIDQNEYEGESTFDCS 324 Query: 42 ---------YDEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFP 89 + KI II + IIV + L L K Sbjct: 325 DTSDENVLSLRNPIFHRNTPSTKISRAIEIINEHVLLEKKKIIVVSQSVALLEILNKHLY 384 Query: 90 QGRT-------------LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + T K I ++NE P + G L+F Sbjct: 385 KDSTRQLKIMTLTGRTPQHKIGELISDFNESVKPCILLISLKLAETGLNLNGAKYLLFMD 444 Query: 137 LWWDLEEH-QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L W+ Q I R+ V V+ + ++T+D+ + Q +TK ++ Sbjct: 445 LHWNPHLEPQSAIHRL-------GQQNENVIVFQFVCKDTVDDHIQQVQQTKLSLA 493 >gi|226290023|gb|EEH45507.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 1252 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 51/144 (35%), Gaps = 10/144 (6%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCG 120 I + L + + + +N + + +L Sbjct: 922 IFYEEGGNSGWYIAEALEILGVEFRIYSNTLKTSDRSAYLALFNTTELVRVLLMDLRQAS 981 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGL++ + + + WD +E + R + + V+V L+ +NT+++ + Sbjct: 982 HGLDI-PCASRVFIVNPIWDP-----NVESQAIKRAHRISQGKPVYVETLVLKNTLEDKM 1035 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 L+R + + + L +K+ + Sbjct: 1036 LRR---RKQMSNAELRHAEKDPLD 1056 >gi|225682607|gb|EEH20891.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 1275 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 51/144 (35%), Gaps = 10/144 (6%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCG 120 I + L + + + +N + + +L Sbjct: 945 IFYEEGGNSGWYIAEALEILGVEFRIYSNTLKTSDRSAYLALFNTTELVRVLLMDLRQAS 1004 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 HGL++ + + + WD +E + R + + V+V L+ +NT+++ + Sbjct: 1005 HGLDI-PCASRVFIVNPIWDP-----NVESQAIKRAHRISQGKPVYVETLVLKNTLEDKM 1058 Query: 181 LQRLRTKSTIQDLLLNALKKETIH 204 L+R + + + L +K+ + Sbjct: 1059 LRR---RKQMSNAELRHAEKDPLD 1079 >gi|228482586|gb|ACQ43545.1| brahma-like protein [Anopheles quadriannulatus] gi|228482588|gb|ACQ43546.1| brahma-like protein [Anopheles arabiensis] gi|228482590|gb|ACQ43547.1| brahma-like protein [Anopheles arabiensis] gi|228482592|gb|ACQ43548.1| brahma-like protein [Anopheles quadriannulatus] gi|228482594|gb|ACQ43549.1| brahma-like protein [Anopheles gambiae S] gi|228482596|gb|ACQ43550.1| brahma-like protein [Anopheles gambiae S] gi|228482598|gb|ACQ43551.1| brahma-like protein [Anopheles gambiae S] gi|228482600|gb|ACQ43552.1| brahma-like protein [Anopheles gambiae S] gi|228482602|gb|ACQ43553.1| brahma-like protein [Anopheles gambiae S] gi|228482604|gb|ACQ43554.1| brahma-like protein [Anopheles gambiae S] gi|228482606|gb|ACQ43555.1| brahma-like protein [Anopheles gambiae S] gi|228482608|gb|ACQ43556.1| brahma-like protein [Anopheles gambiae M] gi|228482610|gb|ACQ43557.1| brahma-like protein [Anopheles gambiae S] gi|228482612|gb|ACQ43558.1| brahma-like protein [Anopheles gambiae S] gi|228482614|gb|ACQ43559.1| brahma-like protein [Anopheles gambiae M] gi|228482616|gb|ACQ43560.1| brahma-like protein [Anopheles gambiae S] gi|228482618|gb|ACQ43561.1| brahma-like protein [Anopheles gambiae M] gi|228482620|gb|ACQ43562.1| brahma-like protein [Anopheles gambiae M] gi|228482622|gb|ACQ43563.1| brahma-like protein [Anopheles gambiae S] gi|228482624|gb|ACQ43564.1| brahma-like protein [Anopheles gambiae S] gi|228482626|gb|ACQ43565.1| brahma-like protein [Anopheles gambiae M] gi|228482628|gb|ACQ43566.1| brahma-like protein [Anopheles gambiae S] gi|228482630|gb|ACQ43567.1| brahma-like protein [Anopheles gambiae M] gi|228482632|gb|ACQ43568.1| brahma-like protein [Anopheles gambiae M] gi|228482634|gb|ACQ43569.1| brahma-like protein [Anopheles gambiae M] gi|228482636|gb|ACQ43570.1| brahma-like protein [Anopheles gambiae M] gi|228482638|gb|ACQ43571.1| brahma-like protein [Anopheles gambiae M] gi|228482640|gb|ACQ43572.1| brahma-like protein [Anopheles gambiae M] gi|228482642|gb|ACQ43573.1| brahma-like protein [Anopheles quadriannulatus] gi|228482644|gb|ACQ43574.1| brahma-like protein [Anopheles arabiensis] gi|228482646|gb|ACQ43575.1| brahma-like protein [Anopheles arabiensis] gi|228482648|gb|ACQ43576.1| brahma-like protein [Anopheles quadriannulatus] gi|228482650|gb|ACQ43577.1| brahma-like protein [Anopheles gambiae S] gi|228482652|gb|ACQ43578.1| brahma-like protein [Anopheles gambiae S] gi|228482654|gb|ACQ43579.1| brahma-like protein [Anopheles gambiae S] gi|228482656|gb|ACQ43580.1| brahma-like protein [Anopheles gambiae S] gi|228482658|gb|ACQ43581.1| brahma-like protein [Anopheles gambiae S] gi|228482660|gb|ACQ43582.1| brahma-like protein [Anopheles gambiae S] gi|228482662|gb|ACQ43583.1| brahma-like protein [Anopheles gambiae S] gi|228482664|gb|ACQ43584.1| brahma-like protein [Anopheles gambiae M] gi|228482666|gb|ACQ43585.1| brahma-like protein [Anopheles gambiae S] gi|228482668|gb|ACQ43586.1| brahma-like protein [Anopheles gambiae S] gi|228482670|gb|ACQ43587.1| brahma-like protein [Anopheles gambiae M] gi|228482672|gb|ACQ43588.1| brahma-like protein [Anopheles gambiae S] gi|228482674|gb|ACQ43589.1| brahma-like protein [Anopheles gambiae M] gi|228482676|gb|ACQ43590.1| brahma-like protein [Anopheles gambiae M] gi|228482678|gb|ACQ43591.1| brahma-like protein [Anopheles gambiae S] gi|228482680|gb|ACQ43592.1| brahma-like protein [Anopheles gambiae S] gi|228482682|gb|ACQ43593.1| brahma-like protein [Anopheles gambiae M] gi|228482684|gb|ACQ43594.1| brahma-like protein [Anopheles gambiae S] gi|228482686|gb|ACQ43595.1| brahma-like protein [Anopheles gambiae M] gi|228482688|gb|ACQ43596.1| brahma-like protein [Anopheles gambiae M] gi|228482690|gb|ACQ43597.1| brahma-like protein [Anopheles gambiae M] gi|228482692|gb|ACQ43598.1| brahma-like protein [Anopheles gambiae M] gi|228482694|gb|ACQ43599.1| brahma-like protein [Anopheles gambiae M] gi|228482696|gb|ACQ43600.1| brahma-like protein [Anopheles gambiae M] Length = 270 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 52/190 (27%), Gaps = 36/190 (18%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + V+ +L N + + H Sbjct: 82 LYKHMQSKGVLLTDGSEKGNKGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHIGVQ 141 Query: 53 -----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ--------- 90 K + L+ I+ K +++ + ++ Sbjct: 142 GTVTGPDLYRASGKFELLDRILPKLKATGHRVLLFCQMTQCMTIIEDYLSWRGFGYLRLD 201 Query: 91 -GRTLDKDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++ ++++N + G GLNLQ + +V F W+ + Q Sbjct: 202 GTTKSEERGDLLKKFNSKNSDYFLFLLSTRAGGLGLNLQT-ADTVVIFDSDWNPHQDLQA 260 Query: 148 IERIGVTRQR 157 +R QR Sbjct: 261 QDRAHRIGQR 270 >gi|270015594|gb|EFA12042.1| hypothetical protein TcasGA2_TC001459 [Tribolium castaneum] Length = 552 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 31/82 (37%) Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 P + + L + M++ R + G + V VY L+ + Sbjct: 409 LTPVQKYLYRAILADDTDALNMLKSTKLTDENPMVDLQAQDRCHRIGQTKPVMVYSLVTK 468 Query: 174 NTIDELVLQRLRTKSTIQDLLL 195 TIDE++L R K + +++ Sbjct: 469 GTIDEIILNRADVKKRLGKVVI 490 >gi|30250238|ref|NP_842308.1| Snf2/Rad54 family helicase [Nitrosomonas europaea ATCC 19718] gi|30181033|emb|CAD86223.1| possible helicase (Snf2/Rad54 family) [Nitrosomonas europaea ATCC 19718] Length = 965 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 11/127 (8%) Query: 74 AYHFNSDLARLQ--KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L R + +T D ++ + E + + G+NLQ+ ++ Sbjct: 467 QAIYKDWLQRHEGSDRITGSKTADTRAALVEHFKERGT--IMIATEAGAEGINLQF-CSL 523 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTI 190 ++ + L W+ + +Q I R + G K V V + + N D V Q L K + Sbjct: 524 VINYDLPWNPQRIEQRIGRC-----HRYGQKHDVVVVNFVDRSNEADARVYQLLSQKFKL 578 Query: 191 QDLLLNA 197 + + A Sbjct: 579 FEGVFGA 585 >gi|291536748|emb|CBL09860.1| DNA methylase [Roseburia intestinalis M50/1] Length = 2550 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + +E GK +L CG G+N+Q + W +Q Sbjct: 2168 FIHDAKTDAQRDALFKEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHVDCPWKPSSIEQ 2227 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V +Y + + T D + K ++ + Sbjct: 2228 REGRGIR----QGNENEEVAIYRYVTKGTFDAYNWSLVENKQRFISQVMTS 2274 >gi|171677999|ref|XP_001903950.1| hypothetical protein [Podospora anserina S mat+] gi|170937068|emb|CAP61727.1| unnamed protein product [Podospora anserina S mat+] Length = 2308 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 59/165 (35%), Gaps = 18/165 (10%) Query: 36 ANGAVYYDEEKHWKEVHDE----KIKALEVIIEKA--NAAPIIVAYHFNS---------- 79 + + E++D K+ + +I+ ++V + S Sbjct: 2104 CSSFIKERPVIPCTELNDNVKMSKVDHMMELIKSIIAKDERVLVFGQYQSYLEKLWSRIK 2163 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLW 138 ++ + ++++ G ++ + + + N ++F + + Sbjct: 2164 EIDPKATNLALVTSSRDTSAMLEKFKSGTGGNVMLLNIDNDTSAGSNLTVANHIIFANPY 2223 Query: 139 WDLEEHQQMIE-RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + +H Q I R R + G + V+VY+ + +T ++ +L+ Sbjct: 2224 FHPNKHHQAITVRQAKGRCLRYGQMKTVYVYHFMMAHTDEDRLLR 2268 >gi|328848391|gb|EGF97611.1| hypothetical protein MELLADRAFT_84825 [Melampsora larici-populina 98AG31] Length = 244 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 74 AYHFNSDLARLQKAFPQG--------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 F + G T ++ + N I + G GLN+ Sbjct: 61 WRCFMEWIKIALDCHGIGSGTLHGDMTTHERTCQLNRFKNNNNIEAFIVSIEAGGVGLNM 120 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + + W+ + QQ I+R+ + G V VY+++A ++++ + Sbjct: 121 T-CADEVYLMDAHWNPQIVQQAIDRL-----HRIGQTHPVKVYHVVAGQSVEQHLFNV 172 >gi|15964256|ref|NP_384609.1| putative helicase protein [Sinorhizobium meliloti 1021] gi|15073432|emb|CAC41940.1| Helicase-DNA-binding protein [Sinorhizobium meliloti 1021] Length = 1170 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 8/110 (7%) Query: 89 PQGRTLDKDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G D+ + + +L A + G G+NLQ N++V + L W+ +Q Sbjct: 533 HGGTHRDERRRLQALFRSDLDVRVLVAT-DAAGEGVNLQN-ANLMVNYDLPWNPNRLEQR 590 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A+ T + V RL K ++ L+ Sbjct: 591 FGRI-----HRIGQTEVCHLWNLVAKETREGDVYHRLLLKLEVESQALHG 635 >gi|217969386|ref|YP_002354620.1| SNF2-related protein [Thauera sp. MZ1T] gi|217506713|gb|ACK53724.1| SNF2-related protein [Thauera sp. MZ1T] Length = 975 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 9/110 (8%) Query: 91 GRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +D+ I + +G + + G+NLQ+ +++ + L W+ + +Q I Sbjct: 502 SPQVDRRTALIDHFRKDDGTGAEIMIATEAAAEGVNLQFCA-LIINYDLPWNPQRVEQRI 560 Query: 149 ERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V + +N D+ VL+ L K + + A Sbjct: 561 GRC-----HRYGQRFDVVVINFLNTRNQADQRVLELLTEKFNLFSGVFGA 605 >gi|330987023|gb|EGH85126.1| helicase domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 1178 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 6/109 (5%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G D+ +E+ L+ + G G+NLQ N++V + L W+ +Q Sbjct: 545 HGGTNRDERRMIQEEFRNNPNVLVLIATDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQRF 603 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ ++A T + V Q+L K I+ L Sbjct: 604 GRI-----HRIGQTEVCHLWNIVANETREGEVFQKLFDKMEIEKQALGG 647 >gi|330959670|gb|EGH59930.1| putative helicase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 554 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 6/123 (4%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKD-PCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 V +N +LA+ G K + + + G+ +L S LQ Sbjct: 399 GWHRAVYDIWNEELAQWNPVMYTGSESPKQKEESKRRFLAGESNVLILSLRSGAGLDGLQ 458 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++++ L W + H+ R + G V +LI+ + D +++ L Sbjct: 459 ARCSVVLHGELDWSPKVHE-----QVTGRLDREGQPNPVLSIFLISADGSDPPIIELLGV 513 Query: 187 KST 189 K+ Sbjct: 514 KAA 516 >gi|118372610|ref|XP_001019500.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila] gi|89301267|gb|EAR99255.1| SNF2 family N-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 731 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 7/122 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F +D + ++ +Q + N I + + G+ L + ++F Sbjct: 456 FANDRKKKYIRIDGSVRDEEKSIRVQSFENNKNISIAILSFGAASLGITLTS-ASNILFA 514 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + W I R + G K V +YLI + T+D ++ +++ K I +L Sbjct: 515 EMHWTPA-----IMEQAEDRAHRIGQKNPVTCHYLIGEGTLDNMLYKKILEKQQIVGAIL 569 Query: 196 NA 197 + Sbjct: 570 DG 571 >gi|321261139|ref|XP_003195289.1| DNA supercoiling [Cryptococcus gattii WM276] gi|317461762|gb|ADV23502.1| DNA supercoiling, putative [Cryptococcus gattii WM276] Length = 586 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 26/179 (14%), Positives = 48/179 (26%), Gaps = 19/179 (10%) Query: 15 LQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 L I A + + K Q G K + L+ I+ ++ Sbjct: 387 LNEARINAVSIGKQVPKPIRQ---GPRPLPLTIVTKSRSAKVNFILQAILNAPKDDRFVI 443 Query: 74 A---------YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 L + + + + + GLN Sbjct: 444 FGNNYELGHLTEALDLLDIASTFVGHTLHVQNRRLALDYFETPGVRVCLMDLKLAARGLN 503 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 L N ++F W I+ + R + G R V L+ + T +E + +R Sbjct: 504 LVN-ANRVIFLGPVWS-----SDIQAQAIKRVHRIGQTRPTLVQILVTEGTFEEDIARR 556 >gi|325107709|ref|YP_004268777.1| helicase [Planctomyces brasiliensis DSM 5305] gi|324967977|gb|ADY58755.1| helicase domain protein [Planctomyces brasiliensis DSM 5305] Length = 939 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 L+ +E+++ + + G GLNLQ+ +++V + L W+ +Q Sbjct: 517 CLNGSMDLESRQRVQREFSQDAR--ILISTDAGGEGLNLQF-AHVIVNYDLPWNPMRIEQ 573 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 I R+ + G K V + +I N+++ V Q L K Sbjct: 574 RIGRVD-----RIGQKHRVKAFNMIFANSVELRVHQVLEEKLK 611 >gi|297623430|ref|YP_003704864.1| helicase domain-containing protein [Truepera radiovictrix DSM 17093] gi|297164610|gb|ADI14321.1| helicase domain protein [Truepera radiovictrix DSM 17093] Length = 1160 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 68/185 (36%), Gaps = 19/185 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ 85 + + LA ++ W+E+ ++ E++ + + +++ L LQ Sbjct: 460 IAILKRLEALAARVKQSGTDRKWEELSRLLQESSEMLSPEGSRRKLVIFTEHRDTLLYLQ 519 Query: 86 KA-------------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + G ++ + + K L+ + G G+NLQ +++ Sbjct: 520 ERVTRLLGRPEAVVAIHGGTGREERGKVQATFTQNKDVLVLLATDAAGEGINLQR-AHLM 578 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 V + L W+ +Q RI + G ++ L+AQ T + V +RL K + Sbjct: 579 VNYDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWNLVAQETREGDVFKRLFDKLERER 633 Query: 193 LLLNA 197 L Sbjct: 634 EALGG 638 >gi|254422766|ref|ZP_05036484.1| Helicase conserved C-terminal domain protein [Synechococcus sp. PCC 7335] gi|196190255|gb|EDX85219.1| Helicase conserved C-terminal domain protein [Synechococcus sp. PCC 7335] Length = 1051 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 64/161 (39%), Gaps = 15/161 (9%) Query: 49 KEVHDEKIKALEV-IIEKANAAPIIVAYHFNSDLARLQKAFP---------QGRTLDKDP 98 ++ K+K + K +A ++ +F L L + G D+ Sbjct: 526 QDSKYNKLKDFLDSELAKDSAQKFVIFAYFRGTLKYLARRLNAAGISTGLIMGDMGDRKW 585 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 +Q++ + + P + G++LQ+ LV + L W+ +Q I R+ Q+ Sbjct: 586 EVVQQFRQPEGPSVLLSSEVGSEGIDLQH-CRFLVNYDLPWNPMRVEQRIGRLDRLNQK- 643 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + + ++T++ +L+RL + I + + ++ Sbjct: 644 ---AERISIVNFSLKDTVEAEILERLYKRIRIFEESVGDIE 681 >gi|124801328|ref|XP_001349665.1| DEAD/DEAH box helicase, putative [Plasmodium falciparum 3D7] gi|3845262|gb|AAC71935.1| DEAD/DEAH box helicase, putative [Plasmodium falciparum 3D7] Length = 1997 Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 6/87 (6%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + S GLNLQ + ++ F ++ + + + R + G K V V+ Sbjct: 1405 IFILSTRSGSLGLNLQT-ADTVIIFDSDFNPHQ-----DIQAMCRCHRIGQKNVVKVFRF 1458 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + ++ELV ++ + K +I D ++ A Sbjct: 1459 ITLSGVEELVFKKAQHKLSINDKVIQA 1485 >gi|331013605|gb|EGH93661.1| SNF2-related:helicase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 316 Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 61/191 (31%), Gaps = 36/191 (18%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 + +R+ + + ++ QL + K++ + ++ + Sbjct: 148 QVERD---EYNQIMRSDTHRFARLGALRQL---------------LERVKVRIVADLMAE 189 Query: 66 AN-AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQ-EWNEGKIPLLF 113 + +I+ + +A L++ + K I + + Sbjct: 190 LDVDDKVILFCEYQESVASLREHCLAMGVGCVTLVGSDSPKKRQKAIDAFQQDQDCRVFI 249 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++ G G NL N + F L W R + G R V V +A+ Sbjct: 250 GTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAE 303 Query: 174 NTIDELVLQRL 184 +TID+ + Q L Sbjct: 304 DTIDQQLWQML 314 >gi|295090193|emb|CBK76300.1| DNA methylase [Clostridium cf. saccharolyticum K10] Length = 2605 Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 2221 FIHEANTEVRKKELFSKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 2280 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V V+ + + T D + Q + K ++ + Sbjct: 2281 RKGRIER----QGNQNETVHVFRYVTEGTFDAYLWQTVENKQKFISQIMTS 2327 >gi|28868866|ref|NP_791485.1| helicase/SNF2 family domain-containing protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28852105|gb|AAO55180.1| helicase/SNF2 family domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 805 Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 41/99 (41%), Gaps = 7/99 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I+ + + + G G+NLQ +++V + L W+ Q I R Sbjct: 427 SMRHAERREAIKRFEQQAR--FLISTEAGGEGINLQNQCHVMVNYDLPWNPMRLVQRIGR 484 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + + G K+ V V+ + +++D+ ++ + + Sbjct: 485 L-----YRYGQKKKVVVFNIQQTDSLDQNIVDLMYERID 518 >gi|291525613|emb|CBK91200.1| DNA methylase [Eubacterium rectale DSM 17629] Length = 2510 Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + +E GK +L CG G+N+Q + W +Q Sbjct: 2128 FIHDAKTDAQRDALFKEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHVDCPWKPSSIEQ 2187 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V +Y + + T D + K ++ + Sbjct: 2188 REGRGIR----QGNENEEVAIYRYVTKGTFDAYNWSLVENKQRFISQVMTS 2234 >gi|255019266|ref|ZP_05291392.1| Superfamily II DNA and RNA helicase [Listeria monocytogenes FSL F2-515] Length = 171 Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 31/109 (28%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ G++ +L G G N+Q W + Q Sbjct: 60 FIHDCNNDQQRETLFEKVRRGEVRVLLGSTGKLGTGTNVQNKLIAGHHIDCPWRPSDLTQ 119 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R+ Q V +Y + + T D + Q K ++ Sbjct: 120 RDGRVVR----QGNENDEVQLYRYVTKGTFDSYLWQIQEQKLKYISQVM 164 >gi|291086945|ref|ZP_06571733.1| conserved hypothetical protein [Clostridium sp. M62/1] gi|291076446|gb|EFE13810.1| conserved hypothetical protein [Clostridium sp. M62/1] Length = 2527 Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + +E GK +L CG G+N+Q + W +Q Sbjct: 2145 FIHDAKTDAQRDALFKEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHVDCPWKPSSIEQ 2204 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V +Y + + T D + K ++ + Sbjct: 2205 REGRGIR----QGNENEEVAIYRYVTKGTFDAYNWSLVENKQRFISQVMTS 2251 >gi|210610421|ref|ZP_03288401.1| hypothetical protein CLONEX_00591 [Clostridium nexile DSM 1787] gi|210152498|gb|EEA83504.1| hypothetical protein CLONEX_00591 [Clostridium nexile DSM 1787] Length = 2510 Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + +E GK +L CG G+N+Q + W +Q Sbjct: 2128 FIHDAKTDAQRDALFKEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHVDCPWKPSSIEQ 2187 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V +Y + + T D + K ++ + Sbjct: 2188 REGRGIR----QGNENEEVAIYRYVTKGTFDAYNWSLVENKQRFISQVMTS 2234 >gi|240103680|ref|YP_002959989.1| Type III restriction endonuclease, res subunit [Thermococcus gammatolerans EJ3] gi|239911234|gb|ACS34125.1| Type III restriction endonuclease, res subunit [Thermococcus gammatolerans EJ3] Length = 1100 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 65/170 (38%), Gaps = 26/170 (15%) Query: 49 KEVHDEKIKALEVIIEKANAAP--IIVAYHFNSDLAR-------------LQKAFPQGRT 93 +E +K++ I + + I++ F L T Sbjct: 464 EETKLKKLRETLDFIAREHGEKEKILIFTEFKDTLEYLVNKLQEWGYTVTFIHGEMDMET 523 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +EW ++ A A+ G+NLQ+ ++L+ + + W+ +Q I R+ Sbjct: 524 RLQREKDFREW----AQVMVATEAAG-EGINLQF-CHLLINYDIPWNPNRLEQRIGRV-- 575 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + G + V ++ +A+NT + +VL+RL K L + I Sbjct: 576 ---HRYGQRYPVHIFNFVARNTREGMVLERLLHKIEEIRKALGDKVFDVI 622 >gi|195108187|ref|XP_001998674.1| GI23502 [Drosophila mojavensis] gi|193915268|gb|EDW14135.1| GI23502 [Drosophila mojavensis] Length = 120 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 10/110 (9%) Query: 90 QGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH-QQM 147 T TI+ +NE P +L GLNL YG N L+ W+ Q Sbjct: 1 MTLTSSNTQDTIKNFNESDEPCVLLLTLGLAKSGLNL-YGANSLLVMDSHWNPHLKPQSA 59 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I R+ R V VY L+ ++T+D + Q + K + +L A Sbjct: 60 IYRMDQR-------NRNVSVYQLVCKDTVDGTIQQVQQNKLNLAFQVLRA 102 >gi|145295759|ref|YP_001138580.1| hypothetical protein cgR_1685 [Corynebacterium glutamicum R] gi|140845679|dbj|BAF54678.1| hypothetical protein [Corynebacterium glutamicum R] Length = 892 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 43/135 (31%), Gaps = 15/135 (11%) Query: 67 NAAPIIVAYHF--------NSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 + ++ +F R+ K + + L A Sbjct: 714 HGRKALIFTYFLDVLDELEKHLGERVIGRISGDVPATKRQLLVDALSHSKPGSALIAQIT 773 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GLN+Q ++ + Q V R + G V V+ LI T D Sbjct: 774 AGGVGLNIQS-ASLCIICEPQVKPTIEQ-----QAVARVHRMGQTATVQVHRLIGDETAD 827 Query: 178 ELVLQRLRTKSTIQD 192 E +L+ L K+ + D Sbjct: 828 ERMLEILAGKTHVFD 842 >gi|293373681|ref|ZP_06620028.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|292631336|gb|EFF49967.1| SNF2 family N-terminal domain protein [Bacteroides ovatus SD CMC 3f] Length = 695 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 38/205 (18%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIE--KANAAPIIVAY 75 N + +++ YD +++ +++A ++ K +I+ Sbjct: 477 PNMLVTIMNLREVSEHPYLYDSALTTHDINELVSTSARLQATIKFLDSIKEKEEKVIIFV 536 Query: 76 HFNSDLARLQKAFP--------------------QGRTLDKDPCTIQEWNE-GKIPLLFA 114 LQK +I E+ ++ Sbjct: 537 ERKETQKMLQKLCNERYGIICKIINGDTPSIIKRHSFDRQTRQASINEFQAVDGFNVIIM 596 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ- 173 P + G GLN+ N ++ +S W+ + E R + G + V+VYY +A Sbjct: 597 SPVAAGMGLNVTA-ANHVIHYSRHWNPAK-----ESQATDRAYRIGQTKDVYVYYPMAVT 650 Query: 174 ---NTIDELVLQRLRTKSTIQDLLL 195 T DE++ L K+++ + Sbjct: 651 SDIKTFDEILDDLLSRKTSLATSTI 675 >gi|156034667|ref|XP_001585752.1| hypothetical protein SS1G_13268 [Sclerotinia sclerotiorum 1980] gi|154698672|gb|EDN98410.1| hypothetical protein SS1G_13268 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1092 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 48/136 (35%), Gaps = 6/136 (4%) Query: 48 WKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 ++ I ++ +A +A + T ++ C ++ + Sbjct: 877 MDQIFLHHILEKIIVFYEAENVGYYIAQALKCMNVEHLLYSKRDSTSERSKCVVKFNSLP 936 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ GL++ + + F + + + IE + R + G V V Sbjct: 937 NFRVMLMDVNQAAFGLDM-SAASRVYFVNPVFSPQ-----IEEQAIKRAHRIGQLHPVHV 990 Query: 168 YYLIAQNTIDELVLQR 183 L+ + +I+E++L R Sbjct: 991 ETLVLKGSIEEVILTR 1006 >gi|254805307|ref|YP_003083528.1| putative DEAD/DEAH box helicase [Neisseria meningitidis alpha14] gi|254668849|emb|CBA06913.1| putative DEAD/DEAH box helicase [Neisseria meningitidis alpha14] Length = 932 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 11/124 (8%) Query: 77 FNSDLARLQ--KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + L R + +T D ++ + E + + G+NLQ+ ++++ Sbjct: 446 YKNWLKRHEGSDKITGSKTADTRAALVEHFKERGT--IMIATEAGAEGINLQF-CSLIIN 502 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDL 193 + L W+ + +Q I R + G K V V + + N D+ V + L K + D Sbjct: 503 YDLPWNPQRVEQRIGRC-----HRYGQKHDVVVVNFVDETNEADQRVYELLEQKFKLFDG 557 Query: 194 LLNA 197 + A Sbjct: 558 VFGA 561 >gi|147841648|emb|CAN75315.1| hypothetical protein VITISV_024158 [Vitis vinifera] Length = 1904 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 43/205 (20%) Query: 7 FQRELYCDLQGENIEAFN------SASKTVKCL------QLANGAVYYDEEKHWKEVHDE 54 F RE +L+ + S +C+ + + Sbjct: 1630 FSREELLELKKHKDDVKKGSKVKFVLSLVNRCIIRKEKILIFCHNISPINLFVDIFDKLY 1689 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE--GKIPLL 112 K K E ++ + + + ++ E G +L Sbjct: 1690 KWKKGEDVLVLQGDLELF-----------------------ERGRVMDQFEEPGGASKVL 1726 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A +C G++L + ++ W+ + + V R + G +R V+VY L+ Sbjct: 1727 LASITACAEGISLTA-ASRVILLDTEWNPSKQ-----KQAVARAFRPGQERVVYVYQLLE 1780 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNA 197 +T++E R K + ++ + Sbjct: 1781 TDTLEEEKNSRTNWKEWVSSMIFSE 1805 >gi|71001130|ref|XP_755246.1| SNF2 family helicase [Aspergillus fumigatus Af293] gi|66852884|gb|EAL93208.1| SNF2 family helicase, putative [Aspergillus fumigatus Af293] gi|159129330|gb|EDP54444.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163] Length = 2115 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 7/157 (4%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLA-----RLQKAFPQGR 92 A EE + K+ L I+++ N I+ F + Sbjct: 1924 ASLGFEEDRSTQYGGRKMDKLVEIVKEIPNQERAILFIQFPELIDVASKAFDLAKITHAV 1983 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH-QQMIERI 151 +D I+E+ +G + S N ++F S ++ Sbjct: 1984 ITARDTKKIEEFKKGNEKVAILQLGSETAAGLNLQCTNHVIFLSPMLAETQYDYDSSMTQ 2043 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + R + G R V VY+L+ + TID +LQ R K Sbjct: 2044 AIGRALRYGQTRRVHVYHLLMKRTIDVNILQERRGKI 2080 >gi|124262809|ref|YP_001023279.1| SNF2 family DNA/RNA helicase [Methylibium petroleiphilum PM1] gi|124262055|gb|ABM97044.1| superfamily II DNA/RNA helicases SNF2 family-like protein [Methylibium petroleiphilum PM1] Length = 585 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 43/140 (30%), Gaps = 5/140 (3%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 + A E + + A + + + + + G ++ Sbjct: 406 MVLASEEKVIVFAWHREVYALLMEALAEFKPVMYTGSESPRQKEEAKNAFINGDARVMLM 465 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + LQ+ + +F L W H Q I R + Y+L+A++ Sbjct: 466 SLRAGAGTDGLQHVCKVGIFAELDWSPGVHVQCIGRF-----HRDEQDEPSMAYFLLAED 520 Query: 175 TIDELVLQRLRTKSTIQDLL 194 D ++ + K T + + Sbjct: 521 GSDPVIADIVGLKKTQLEGV 540 >gi|330920074|ref|XP_003298878.1| hypothetical protein PTT_09713 [Pyrenophora teres f. teres 0-1] gi|311327723|gb|EFQ93020.1| hypothetical protein PTT_09713 [Pyrenophora teres f. teres 0-1] Length = 1280 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTI 101 K+ L + + II+ Y + + + + + Sbjct: 1009 SSKLTYLLDKVMQHQATEKIIIFYDGDDAAFYIAQCLELMYVNHRIYARTLNNTLRSEYV 1068 Query: 102 QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NE + +L A GLNL ++++ + E + R + G Sbjct: 1069 RLFNEHPDVRVLLIDVACGALGLNL-NAASVVLIVNPINRPGL-----EAQAIKRSHRIG 1122 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + V V L+ +NTI+ + R K + D Sbjct: 1123 QTKEVIVETLVLENTIEHAIFNRA-KKMSRAD 1153 >gi|320588566|gb|EFX01034.1| snf2 family helicase [Grosmannia clavigera kw1407] Length = 935 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 42/140 (30%), Gaps = 10/140 (7%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----PCTIQEWNEGK 108 D I+ L + IV F L L +AF + + Sbjct: 702 DTLIRHLLWLRSSDPGTKAIVFSQFPEFLVILAQAFTHYHIGFSRFSDCDGIAKFKEDPS 761 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I H + GLNL N ++ + Q I R+ + G + V+ Sbjct: 762 IECFLLHARAHSSGLNLVN-ANHVILCEPLVNTALELQAIARV-----HRIGQENETTVW 815 Query: 169 YLIAQNTIDELVLQRLRTKS 188 I T++E + + Sbjct: 816 LYIVDGTVEESIYNLSVQRR 835 >gi|292557960|gb|ADE30961.1| putative helicase [Streptococcus suis GZ1] Length = 2554 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 59/198 (29%), Gaps = 23/198 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + ++ D +G I A Y + + ++ ++ Sbjct: 2113 QRMLNDMLPDFEGSKINA--------------CVDNIYRIWEETADKKSAQLVFCDLSTP 2158 Query: 65 KANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 K + + + R + + T K Q+ +G++ +L Sbjct: 2159 KNDGTFSVYNDIRKKLIERGVPESEVRFIHEADTDVKKKELFQKTRKGEVRVLLGSTQKM 2218 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G N+Q L W + +Q RI Q V +Y + + T D Sbjct: 2219 GAGTNVQDRLIALHDVDCPWRPSDLEQRSGRIIR----QGNSNPDVDIYRYVTEQTFDAY 2274 Query: 180 VLQRLRTKSTIQDLLLNA 197 + Q + K ++ + Sbjct: 2275 LYQLVEGKQKFASQIMTS 2292 >gi|323448244|gb|EGB04145.1| hypothetical protein AURANDRAFT_39147 [Aureococcus anophagefferens] Length = 684 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 64/193 (33%), Gaps = 14/193 (7%) Query: 4 YHKFQRELYC--DLQGENIEAFNSASKTVKCLQLANGAVYYD--EEKHWKEVHDEKIKAL 59 Y +RE ++ + + A A + +G E + +H + Sbjct: 499 YATIEREDLQSPEMVRKEMAAKKKALLMELFRR--SGPAKLPAIERRISDLLHGVDEERF 556 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC--TIQEWNEGKIPLLFAHPA 117 + ++ N L ++ G T KD N+ K+ + Sbjct: 557 SGKMLVFAHHRKVLDTLANGILRDIKYIRIDGTTPAKDRQSRVTTFQNDAKVRVALLGIT 616 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G L L + ++F L+W R + G V V YL+A + +D Sbjct: 617 AAGIALTLTA-ASRVIFTELYWTPAALL-----QAEDRAHRIGQTSEVVVEYLLADDCVD 670 Query: 178 ELVLQRLRTKSTI 190 E++ ++ K + Sbjct: 671 EILWPLIQHKMLM 683 >gi|300024515|ref|YP_003757126.1| SNF2-related protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526336|gb|ADJ24805.1| SNF2-related protein [Hyphomicrobium denitrificans ATCC 51888] Length = 583 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 6/131 (4%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP-CTIQEWNEGKIPLLFAHPASCGHGLNL 125 V + +L+ G + +Q + +G LL S L Sbjct: 408 CGWHRDVYDIWMDELSEFNPVLYTGSESPRQKAKAVQMFMDGASNLLIMSLRSGAGLDGL 467 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 Q +VF L W + H+Q + R+ + G + V YL+A D V+ + Sbjct: 468 QQRCRTIVFGELDWSGKVHEQCVARLD-----RPGQEHQVDAIYLVADGGSDPAVMGVIG 522 Query: 186 TKSTIQDLLLN 196 K++ +++ Sbjct: 523 LKNSQAAGIVD 533 >gi|195377036|ref|XP_002047298.1| GJ13361 [Drosophila virilis] gi|194154456|gb|EDW69640.1| GJ13361 [Drosophila virilis] Length = 1282 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 55/184 (29%), Gaps = 23/184 (12%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVII-----EKANAAPIIVAYHFNSDLARLQKAF 88 QL KI + ++ + + I++ + + L + A Sbjct: 1095 QLYYSVRKGVNSSKVIGDFSTKIAYIVELVLKIKSQSKDKEKILIFSQWATILNHIASAL 1154 Query: 89 PQGRTLDKDP---CTIQEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEH 144 Q + I E+ + + + L + Sbjct: 1155 SQNGIEYRSKFTTRDIDEFKDPERNVTCLLMPLARGAKGLNLIEATHVFLVEPILTPG-- 1212 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT---K------STIQDLLL 195 E + R + G + V+ I TI+E +L+ +++ K + ++ L Sbjct: 1213 ---EELQAIGRVHRFGQTKPTTVHRFIVNGTIEENILKLIKSADDKSTLSTHWDLDNMTL 1269 Query: 196 NALK 199 ++LK Sbjct: 1270 DSLK 1273 >gi|154287644|ref|XP_001544617.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150408258|gb|EDN03799.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 1117 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 44/109 (40%), Gaps = 10/109 (9%) Query: 97 DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +NE + +L HGL++ + + + WD E + R Sbjct: 876 RSEYLSLFNETESVRVLLMDLRQAAHGLHI-ACASRVFIVNPIWDP-----NFESQAIKR 929 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + + V+V L+ + T+++ +L+R + + + L +K+ + Sbjct: 930 AHRISQNKPVYVETLVLKGTLEDRMLRR---RKQMSNAELRHAEKDPLD 975 >gi|300022704|ref|YP_003755315.1| DEAD-like helicase [Hyphomicrobium denitrificans ATCC 51888] gi|299524525|gb|ADJ22994.1| DEAD-like helicase [Hyphomicrobium denitrificans ATCC 51888] Length = 584 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 6/131 (4%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-TIQEWNEGKIPLLFAHPASCGHGLNL 125 V + +LA F G + ++Q + EG L S L Sbjct: 410 CGWHRDVYEIWARELADFNPVFYTGTETPRQKKKSVQMFCEGHSNLFILSLRSGAGLNGL 469 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 Q+ +VF L W + H+Q R+ + G ++ V YL A D ++ L Sbjct: 470 QHRCRTIVFGELDWSPKVHEQCTGRLD-----RPGQEQQVDEIYLHADGGSDPSMIGVLA 524 Query: 186 TKSTIQDLLLN 196 KS+ +++ Sbjct: 525 LKSSQSQGIVD 535 >gi|116194320|ref|XP_001222972.1| hypothetical protein CHGG_03758 [Chaetomium globosum CBS 148.51] gi|88179671|gb|EAQ87139.1| hypothetical protein CHGG_03758 [Chaetomium globosum CBS 148.51] Length = 910 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 26/86 (30%), Gaps = 5/86 (5%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + + W+ E + R + G R V Sbjct: 809 VADINAVPADVKCLTLTVASRAYLMEPHWNPTL-----EEQALARIHRIGQMREVTTVRF 863 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLN 196 +++ +E V++ K + +LL+ Sbjct: 864 YIRDSFEERVIELQNAKKDLARVLLS 889 >gi|331245308|ref|XP_003335291.1| hypothetical protein PGTG_17071 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314281|gb|EFP90872.1| hypothetical protein PGTG_17071 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 2163 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 14/152 (9%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWN-- 105 + +I + ++V F+ L ++ A +G L++ N Sbjct: 1997 RMCHLIKQLKEDDRVLVFVQFSDLLDKVYDALEARGIGVARVKGTALNQMKVMSNFQNEV 2056 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL-EEHQQMIERIGVTRQRQAGFKRA 164 + I +L H N F S + + + E + R R+ G + Sbjct: 2057 DPHIRVLLLHATDSSASGANLTNANYAFFVSPLFLPTADKFKACETQAIGRLRRYGQMKK 2116 Query: 165 VFVYYLIAQNTIDELVLQ-RLRT-KSTIQDLL 194 V V ++ +TID + R K + + + Sbjct: 2117 VHVIRMLTVDTIDTQIYGFRHDKSKEVLAEEI 2148 >gi|312792927|ref|YP_004025850.1| helicase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180067|gb|ADQ40237.1| helicase domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 1111 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + G +D+ E+ K ++ A A+ G+NLQ+ ++V + + W Sbjct: 510 EWGYAVVTIHGGMNMDERIRAEHEFKN-KAQVMVATEAAG-EGINLQF-CWLMVNYDIPW 566 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +Q + RI + G + V +Y L++ +T + +LQ+L K L + + Sbjct: 567 NPNRLEQRMGRI-----HRYGQESEVHIYNLVSGDTKEGQILQKLFQKLEAMRAHLGSDR 621 >gi|78355826|ref|YP_387275.1| DEAD/DEAH box helicase-like [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218231|gb|ABB37580.1| DEAD/DEAH box helicase-like protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 665 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + + ++ A + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 475 RTALVEHFRD-NAQIMIAT-EAAAEGVNLQF-CSLIVNYDLPWNPQRIEQRIGRC----- 526 Query: 157 RQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ V + L K + + + A Sbjct: 527 HRYGQKHDVVVVNFLNERNAADQRVYELLEHKFNLFNGVFGA 568 >gi|87308613|ref|ZP_01090753.1| prophage LambdaMc01, helicase, SNF2 family protein [Blastopirellula marina DSM 3645] gi|87288705|gb|EAQ80599.1| prophage LambdaMc01, helicase, SNF2 family protein [Blastopirellula marina DSM 3645] Length = 493 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 58/158 (36%), Gaps = 18/158 (11%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVA--------YHFNSDLARLQKAF----PQGRTLDKD 97 E D K + ++ + IV F + L R G++ + Sbjct: 46 ECPDLKWEFIKEKVVDLAGEEKIVFFAQPIETVTTFVNFLKREYGEDVSVIIGGQSDAER 105 Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++++ + + G G+NLQ LV + W+ + +Q + R+ Sbjct: 106 SAEVEKFLKPDGARFLVSSKAGGEGINLQ-VARRLVHIDVPWNPMDMEQRVGRV-----H 159 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + G +R + V ++ +++ +E + R K + L Sbjct: 160 RFGSRRNIVVDTIVVKDSREEHAYRAAREKLRLIASTL 197 >gi|148667867|gb|EDL00284.1| Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1, isoform CRA_a [Mus musculus] Length = 922 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 40/108 (37%), Gaps = 6/108 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + + D++ + + + GL +++VF L+W+ Sbjct: 721 QHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTF-STADLVVFAELFWNPG 779 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 780 VLI-----QAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKV 822 >gi|20809351|gb|AAH29078.1| Smarcal1 protein [Mus musculus] Length = 910 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 40/108 (37%), Gaps = 6/108 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + + D++ + + + GL +++VF L+W+ Sbjct: 709 QHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTF-STADLVVFAELFWNPG 767 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 768 VLI-----QAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKV 810 >gi|74150596|dbj|BAE32320.1| unnamed protein product [Mus musculus] Length = 910 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 40/108 (37%), Gaps = 6/108 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + + D++ + + + GL +++VF L+W+ Sbjct: 709 QHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTF-STADLVVFAELFWNPG 767 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 768 VLI-----QAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKV 810 >gi|229577278|ref|NP_061287.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Mus musculus] gi|60390942|sp|Q8BJL0|SMAL1_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; Short=mharp; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|26350593|dbj|BAC38933.1| unnamed protein product [Mus musculus] gi|148667869|gb|EDL00286.1| Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1, isoform CRA_c [Mus musculus] Length = 910 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 40/108 (37%), Gaps = 6/108 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + + D++ + + + GL +++VF L+W+ Sbjct: 709 QHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTF-STADLVVFAELFWNPG 767 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 768 VLI-----QAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKV 810 >gi|302690328|ref|XP_003034843.1| hypothetical protein SCHCODRAFT_81115 [Schizophyllum commune H4-8] gi|300108539|gb|EFI99940.1| hypothetical protein SCHCODRAFT_81115 [Schizophyllum commune H4-8] Length = 1215 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 50/162 (30%), Gaps = 23/162 (14%) Query: 53 DEKIKALE-VIIEKANAAPIIVAYH------FNSD----LARLQKAFPQGRTLDKDPCTI 101 K+ + ++ + ++ + + L F + + Sbjct: 962 SSKLNYVMNEVLRYSGDEKFLIFSESPLTLAYIEEALQLLEVRYMRFTTEAKPRQREQMV 1021 Query: 102 QEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + GLNL + ++F Q +E + R + G Sbjct: 1022 MTFETSDVYRVFLMELKYGARGLNLVS-ASRVIFCEP-----VWQADVESQAIKRVHRIG 1075 Query: 161 FKR-AVFVYYLIAQNTIDELVLQR---LRTK-STIQDLLLNA 197 KR V V LI + T +E +L R L K +L+ Sbjct: 1076 QKRSEVNVKTLIIRGTAEENMLSRRLELEGKHLAKMPKVLDE 1117 >gi|226947213|ref|YP_002802286.1| helicase, Snf2 family [Azotobacter vinelandii DJ] gi|226722140|gb|ACO81311.1| helicase, Snf2 family [Azotobacter vinelandii DJ] Length = 929 Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 11/127 (8%) Query: 74 AYHFNSDLARLQ--KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L R + +T D ++ + E + + G+NLQ+ ++ Sbjct: 431 QAIYKDWLQRHEGSDRITGSKTADTRAALVEHFKERGT--IMIATEAGAEGINLQF-CSL 487 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTI 190 ++ + L W+ + +Q I R + G K V V + + N D V Q L K + Sbjct: 488 VINYDLPWNPQRIEQRIGRC-----HRYGQKHDVVVVNFVDRSNEADARVYQLLSQKFKL 542 Query: 191 QDLLLNA 197 + + A Sbjct: 543 FEGVFGA 549 >gi|302035518|ref|YP_003795840.1| putative dEAD/DEAH box helicase, SNF2 family [Candidatus Nitrospira defluvii] gi|300603582|emb|CBK39912.1| putative DEAD/DEAH box helicase, SNF2 family [Candidatus Nitrospira defluvii] Length = 912 Score = 54.8 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 10/126 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R + + + E +I ++ A + GLNLQ G ++ L W+ Sbjct: 734 RSRLYQRGDSVTCERETLKKMVAEHEIRIMVAT-DAACEGLNLQTLGTLINI-DLPWNPT 791 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS----TIQDLLLNAL 198 +Q I RI Q++ V + L+ + T+DE + +RL + + + + + Sbjct: 792 RLEQRIGRIKRFGQKR----ETVDMLNLVNEQTVDEKIYERLSERMRNRYDLFGSVPDTI 847 Query: 199 KKETIH 204 K E I Sbjct: 848 KDEWIE 853 >gi|189198616|ref|XP_001935645.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187982744|gb|EDU48232.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1218 Score = 54.8 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 19/152 (12%) Query: 53 DEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTI 101 K+ L + + II+ Y ++ + + + + Sbjct: 947 SAKLTYLLDKVMQHQATDKIIIFYDGDNAAFYIAQCLELMYVNHRIYARTLENTLRSEYV 1006 Query: 102 QEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + +NE + +L A GLNL ++++ + E + R + G Sbjct: 1007 RLFNEHPDVRVLLIDVACGALGLNL-NAASVVLIVNPINRPGL-----EAQAIKRSHRIG 1060 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + V V L+ +NTI+ + R K + D Sbjct: 1061 QTKEVIVETLVLENTIEHAIFNRA-KKMSRAD 1091 >gi|299115214|emb|CBN74047.1| Ci-SWI/SNF [Ectocarpus siliculosus] Length = 1074 Score = 54.8 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 72/223 (32%), Gaps = 42/223 (18%) Query: 1 MKQYHKF---QRELYCDLQGENI---------EAFNSASKTVKCLQLANGAVYYDE---- 44 +K Y QR+ Y DL ++ + + ++ ++ N +D Sbjct: 480 VKLYIGMTPMQRKWYKDLLNRDVGNLNTLGGPDKMRLLNILMQLRKVCNHPYLFDGAEPG 539 Query: 45 ----EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFP--------- 89 + K+ L+ ++ K + +++ L L+ Sbjct: 540 PPFVNGSHLWENAGKMVLLQKLLPKLRMQGSRVLLFCQMTRLLDILEDYMHLQGYDYCRI 599 Query: 90 -QGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + E+NE L + G G+NL ++++ + W+ + Sbjct: 600 DGSTDGESRDSQMDEFNEPGSSKFLFLLSTRAGGLGINL-ATADVVILYDSDWNPQRELM 658 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + + G + + + +IDE +L++ K+ Sbjct: 659 AMVKFGADEILRMDDSQG------LTDESIDE-LLRKGEEKTE 694 >gi|299748682|ref|XP_001839314.2| hypothetical protein CC1G_13355 [Coprinopsis cinerea okayama7#130] gi|298408087|gb|EAU82504.2| hypothetical protein CC1G_13355 [Coprinopsis cinerea okayama7#130] Length = 1191 Score = 54.8 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 51/175 (29%), Gaps = 22/175 (12%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 AVY + D+K+ I ++ +V F + + Sbjct: 377 AVYPPMPTSAQFTRDKKVI----IFQEFTYCMALVQNIFKLYGMNKPLIIQGRHSFKQRA 432 Query: 99 CTIQEWN-EGKIPLLFAHPASCGHGLNLQ-------------YGGNILVFFSLWWDLEEH 144 + ++N + +L GLNL + + L + + Sbjct: 433 SIVDKFNKDPNHRVLIFS-KVGSTGLNLTRASIVIFLVRTSLHFLSNAAIHPLNPNPPKD 491 Query: 145 QQM---IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q E + R + + V V L+A NT D + R K + D Sbjct: 492 QPWSAQDEWQIIGRAYRQRQSKPVTVIQLLAANTADITLSLLARGKKDMLDAFFG 546 >gi|303288742|ref|XP_003063659.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454727|gb|EEH52032.1| predicted protein [Micromonas pusilla CCMP1545] Length = 518 Score = 54.8 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 45/150 (30%), Gaps = 17/150 (11%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN 105 ++ + A + H L ++ + Sbjct: 375 VQEYLETLIDGGADKFLFFAHHAELLDAAAATLKKRKIQHIRIDGSTPSTARGKLVETFQ 434 Query: 106 E-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + + G GL L + ++F L W E R + G + Sbjct: 435 TVDAVRVAVLSIKAAGVGLTLTA-ASAVIFGELSWTPGEIV-----QAEDRAHRIGQVNS 488 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V V +L A+NT+D+++ ++ K + Sbjct: 489 VSVQFLCARNTVDDIMWGSVQNKLENLGQV 518 >gi|158285693|ref|XP_308421.4| AGAP007417-PA [Anopheles gambiae str. PEST] gi|157020116|gb|EAA04610.4| AGAP007417-PA [Anopheles gambiae str. PEST] Length = 1323 Score = 54.8 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 51/152 (33%), Gaps = 13/152 (8%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP-- 98 + ++ + ++ ++ + + I++ H+ L + A ++ Sbjct: 1144 MHKIRGNFSNKVSKIVQTALELVAEDPSVKIVIFSHWEPILTEVGVALAANDITLREKSA 1203 Query: 99 ---CTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++ + + I L GLNL + + E + Sbjct: 1204 KFYQCVADFKDPEKGITCLLLPLRFGSKGLNLTE-ATHVFLVEPILNPGEEM-----QAI 1257 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 R + G R FV+ I NTI+ + + ++ Sbjct: 1258 GRVHRIGQTRPTFVHRFIMLNTIETTIHETIQ 1289 >gi|149409031|ref|XP_001506895.1| PREDICTED: similar to SNF2 histone linker PHD RING helicase [Ornithorhynchus anatinus] Length = 1042 Score = 54.8 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 51/148 (34%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L+ I K A +V + L + KA + I ++ Sbjct: 865 GSHSTKVEAVVRTLKRIQFKCPGAKSLVFSTWQDVLDIISKALYDNNMVFAQINGIHKFQ 924 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + KI +L + +GLN+ ++ + Q I R+ Sbjct: 925 ENLSAFKYDPKINILLLPLHTGSNGLNI-IEATHVLLVEPILNPAHELQAIGRV-----H 978 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 979 RIGQTKPTIVHRFLIKTTIEERMQTMLK 1006 >gi|54027756|ref|YP_121997.1| hypothetical protein pnf11080 [Nocardia farcinica IFM 10152] gi|54019264|dbj|BAD60633.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 2153 Score = 54.8 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 4/90 (4%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G I LF + G G+N+Q ++ W + +Q R Q + Sbjct: 1760 NGSIQFLFGSTSKMGVGVNIQDRMVAMLHVDCPWRPADIEQRDGRGIR----QGNQNEEI 1815 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V ++ + T D + K+ + + + Sbjct: 1816 AVGRVVTEGTFDARMWAAQARKAAMVNQFM 1845 >gi|39975031|ref|XP_368906.1| hypothetical protein MGG_00338 [Magnaporthe oryzae 70-15] gi|145018771|gb|EDK03050.1| hypothetical protein MGG_00338 [Magnaporthe oryzae 70-15] Length = 1151 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 47/116 (40%), Gaps = 9/116 (7%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 L + + ++ + +NE K ++ GLN+ + + F + Sbjct: 924 EILHIPHLIYAKNLKAERRAQYVATFNETSKFRVMLMDLKQAAFGLNM-NSASRIYFVNP 982 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + + +E + R R+ G + V V L+ + T++EL+++R K Q+ Sbjct: 983 VLNPQ-----VEAQAIGRARRIGQSKDVTVETLVLRGTLEELIVER--KKKMTQEE 1031 >gi|220907512|ref|YP_002482823.1| helicase domain-containing protein [Cyanothece sp. PCC 7425] gi|219864123|gb|ACL44462.1| helicase domain protein [Cyanothece sp. PCC 7425] Length = 1194 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 8/110 (7%) Query: 89 PQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G D+ + + + K+ +L A A+ G+NLQ +++V + L W+ +Q Sbjct: 540 HGGMGRDERKKAEEGFKQDIKVEVLVATDAAG-EGINLQR-AHLMVNYDLPWNPNRLEQR 597 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A+ T + V L K I+ L Sbjct: 598 FGRI-----HRIGQTEVCHLWNLVAEETREGDVYLSLLKKLEIEQKALGG 642 >gi|156564053|ref|YP_001429796.1| RecQ helicase [Bacillus phage 0305phi8-36] gi|154622750|gb|ABS83630.1| RecQ helicase [Bacillus phage 0305phi8-36] Length = 624 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 70/226 (30%), Gaps = 36/226 (15%) Query: 1 MKQYHK--FQRELYCDLQGENIEAFNSASKTVKCL----QLANGAVYYDEEKHWKEVHDE 54 +KQY K + G +EA + L Q + + K+ K Sbjct: 375 LKQYQKDLISEKSDLLRAGRKVEAKAVGDRMKAVLNARIQGSCHPNLFQMSKNKKIRERN 434 Query: 55 KIKALEVIIEKA--------------NAAPIIVAYHFNSD----------LARLQKAFPQ 90 K A++ I + N +++ R + Sbjct: 435 KKYAVKNIYDIPKFQECIQRVQEIVDNGHKVVIFVESKRMTVMLHREISKFTRAVRYVGG 494 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ ++ + +L A + GLNLQ G L+ + L + +Q R Sbjct: 495 LKDSVRERRKMKFNTDPSCRVLIAT-GAGSTGLNLQA-GRYLINYDLPHNPAIWEQRKYR 552 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I V + LI Q +DE + +RL K D L Sbjct: 553 IRRLDSTHDR----VHIINLINQGIVDEQMRERLDDKQASFDATLE 594 >gi|67479899|ref|XP_655331.1| helicase [Entamoeba histolytica HM-1:IMSS] gi|56472459|gb|EAL49943.1| helicase domain-containing protein [Entamoeba histolytica HM-1:IMSS] Length = 858 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 5/130 (3%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 Y+ + + + ++ +K ++ + + GL Q + +F Sbjct: 647 YNLQRKKVQFIRIDGETKSENKKELVDIFRDDDNCRVAVLSILAANCGLEFQKAA-LCIF 705 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + E Q +RI Q +V + YLIA + DE + + K + + Sbjct: 706 AEMTFVPGEMLQAEDRIHRIGQ----QADSVKIEYLIANKSYDEQIWNTIEKKLDVVGKV 761 Query: 195 LNALKKETIH 204 L+ +E H Sbjct: 762 LDGKSRELDH 771 >gi|240147676|ref|ZP_04746277.1| SNF2 family protein [Roseburia intestinalis L1-82] gi|257200114|gb|EEU98398.1| SNF2 family protein [Roseburia intestinalis L1-82] Length = 285 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + +E GK +L CG G+N+Q + W +Q Sbjct: 56 FIHDAKTDAQRDALFKEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHVDCPWKPSSIEQ 115 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V +Y + + T D + K ++ + Sbjct: 116 REGRGIR----QGNENEEVAIYRYVTKGTFDAYNWSLVENKQRFISQVMTS 162 >gi|323452688|gb|EGB08561.1| hypothetical protein AURANDRAFT_71563 [Aureococcus anophagefferens] Length = 1637 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + G GLNL G +L+ W+ Q R+ + G R V L Sbjct: 1374 VLLLSSRAGGAGLNL-PGACVLILLEPDWNPAVDDQTCARVW-----RPGQGRRTRVLRL 1427 Query: 171 IAQNTIDELVLQRLRTKSTI 190 A T++E VL R K + Sbjct: 1428 AAAGTLEETVLARQAEKQAL 1447 >gi|195114874|ref|XP_002001992.1| GI17136 [Drosophila mojavensis] gi|193912567|gb|EDW11434.1| GI17136 [Drosophila mojavensis] Length = 733 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 6/95 (6%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +C G+ L I+VF L W+ +R + Sbjct: 564 VDTFQKSSSCRAAVLSLKACNSGITLTA-AEIIVFAELDWNPSTL-----AQAESRAHRI 617 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G + V YL+A T D+ + L+ K + + Sbjct: 618 GQTKPVVCRYLMANQTADDTIWNMLKNKQEVLSKV 652 >gi|330982918|gb|EGH81021.1| SNF2-related:helicase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 281 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 51/135 (37%), Gaps = 14/135 (10%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 147 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 206 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 207 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 266 Query: 112 LFAHPASCGHGLNLQ 126 + G GLNL Sbjct: 267 FLISLKAGGTGLNLT 281 >gi|218191902|gb|EEC74329.1| hypothetical protein OsI_09617 [Oryza sativa Indica Group] Length = 661 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 27/230 (11%), Positives = 70/230 (30%), Gaps = 54/230 (23%) Query: 2 KQY-HKFQREL--YCDLQGENIEAFNSASKTVKCLQLANGAVYYDE-------EKHWKEV 51 K Y ++EL G + + ++ + ++ + E Sbjct: 310 KLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEPEPYVEGEHLVQ 369 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD------------ 97 K+ L++I++K + +++ L LQ + + Sbjct: 370 ASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFA 429 Query: 98 ----------PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +++ N+ + + G GLNL G + ++F+ W+ + Sbjct: 430 AIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNL-IGADTVIFYEQDWNPQA---- 484 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ + R + G V +++R K + ++ Sbjct: 485 -DKQALQRAHRIGQLNNV--------------IMRRAERKLKLSHSVIGE 519 >gi|119185176|ref|XP_001243398.1| hypothetical protein CIMG_07294 [Coccidioides immitis RS] Length = 1386 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 52/189 (27%), Gaps = 36/189 (19%) Query: 1 MK--QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 MK Y + + +++ I + D + Sbjct: 1111 MKNAIYSDIKSDDLEEIKDIEIS------------------------GSFGTKIDTLARH 1146 Query: 59 LEVIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 L + A IV + S L + + + D + + I Sbjct: 1147 LIWLRHHDPGAKSIVFSQYKSFLGILASAFSRFRIEFSSFDSYNGIERFKQDPSIECFLL 1206 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 H + GLNL + + IE + R + G R V+ + + Sbjct: 1207 HAKAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRETTVWMYLVSD 1260 Query: 175 TIDELVLQR 183 +++E + Q Sbjct: 1261 SVEESIYQL 1269 >gi|75759222|ref|ZP_00739323.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493285|gb|EAO56400.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 68 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%) Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E R + G KR V V+ LI T++E + + L K ++ + ++ + Sbjct: 1 MENQATDRAYRIGQKRFVHVHKLITTGTLEEKIDEMLERKQSLNNAVITS 50 >gi|195401136|ref|XP_002059170.1| GJ16178 [Drosophila virilis] gi|194156044|gb|EDW71228.1| GJ16178 [Drosophila virilis] Length = 714 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 7/99 (7%) Query: 97 DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + SC G+ L ++VF L W+ +R Sbjct: 550 RAAYVDTFQKKSSCKAAVLSLKSCNAGITLTA-AEMIVFAELDWNPSTL-----AQAESR 603 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V YL+A T D+ + LR K + + Sbjct: 604 AHRIGQTKPVVCRYLMANQTADDTIWNMLRNKQEVLSKV 642 >gi|326675456|ref|XP_003200358.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like [Danio rerio] Length = 1644 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 60/176 (34%), Gaps = 28/176 (15%) Query: 32 CLQLANGA-----VYYDEEKHWKEV-----HDEKIKALEVII----EKANAAPIIVAYHF 77 C Q + A +++ H K++A+ ++ A +V + Sbjct: 1439 CRQTTSHAEISYVFTTQNNHQGQDIPVKGSHSTKVEAVVRVLKKVQMTDPGAKSLVFSTW 1498 Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEG--------KIPLLFAHPASCGHGLNLQYGG 129 L + KA I ++ E KI +L + +GLN+ Sbjct: 1499 QGVLDIIAKALFDNNMEFAQINGIHKFQENLSAFKYEEKINILLLPLHTGSNGLNI-IEA 1557 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 ++ + Q I R+ + G + FV+ + ++TI+E + L+ Sbjct: 1558 THVLLVEPILNPAHELQAIGRV-----HRIGQTKPTFVHRFLIKSTIEERMQAMLK 1608 >gi|6562295|emb|CAB62593.1| putative protein (fragment) [Arabidopsis thaliana] Length = 786 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 47/162 (29%), Gaps = 10/162 (6%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-FNSDLARLQKAFPQGRTLDK 96 + + +E+ ++ + A+ ++ F D Sbjct: 523 HPLLSGLDYTPEEIDGDRSSTKM--VVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRD 580 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +Q + ++ + + G GL+ +VF L R Sbjct: 581 RQLAVQSFQFSSEVKIAIIGVEAGGVGLDF-SAAQNVVFLELPKTPSLLL-----QAEDR 634 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G AV VY A++T+DE Q L K + Sbjct: 635 AHRRGQTSAVNVYIFCAKDTMDESNWQNLNKKLHRISSTTDG 676 >gi|255014572|ref|ZP_05286698.1| SNF2-related protein [Bacteroides sp. 2_1_7] Length = 916 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 38/205 (18%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEKIKALEVIIE--KANAAPIIVAY 75 N + +++ YD +++ +++A ++ K +I+ Sbjct: 698 PNMLVTIMNLREVSEHPYLYDSALTTHDINELVSTSARLQATIKFLDSIKEKEEKVIIFV 757 Query: 76 HFNSDLARLQ--------------------KAFPQGRTLDKDPCTIQEWNE-GKIPLLFA 114 LQ +I E+ ++ Sbjct: 758 ERKETQKMLQKLSNERYGIICKIINGDTPSIIKRHSFDRQTRQASINEFQAVDGFNVIIM 817 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ- 173 P + G GLN+ N ++ +S W+ + E R + G + V+VYY +A Sbjct: 818 SPVAAGMGLNVTA-ANHVIHYSRQWNPAK-----ESQATDRAYRIGQTKDVYVYYPMAVT 871 Query: 174 ---NTIDELVLQRLRTKSTIQDLLL 195 T DE++ L K+++ + Sbjct: 872 SDIKTFDEILDDLLSRKTSLATSTI 896 >gi|326922946|ref|XP_003207703.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Meleagris gallopavo] Length = 760 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 19/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL----------ARLQKAFP 89 + + ++H I+ + ++ ++ +V H L Sbjct: 518 LLFYNRTAEAKIHS-VIEYILELL-ESGKDKFLVFAHHKVVLDAIVEELEKKHFDYIRID 575 Query: 90 QGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + Q++ + + + GL L +++VF L+W+ Sbjct: 576 GSTPSAERQSLCQKFQLSEKQAVAVLSLTAANMGLTL-SAADLVVFAELFWNPGVLI--- 631 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V V+YL+A+ T D+ + ++ K + Sbjct: 632 --QAEDRAHRIGQTSSVNVHYLVARGTADDFLWPMIQEKIKV 671 >gi|303313780|ref|XP_003066899.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240106566|gb|EER24754.1| SNF2 family N-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 1419 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 53/189 (28%), Gaps = 36/189 (19%) Query: 1 MK--QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 MK Y + + +++ I + D + Sbjct: 1144 MKNAIYSDIKSDDLEEIKDIEIS------------------------GSFGTKIDTLARH 1179 Query: 59 LEVIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 L + A IV + S LA + + + D + + I Sbjct: 1180 LIWLRHHDPGAKSIVFSQYKSFLAILASAFSRFRIEFSSFDSYNGIERFKQDPSIECFLL 1239 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 H + GLNL + + IE + R + G R V+ + + Sbjct: 1240 HAKAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRETTVWMYLVSD 1293 Query: 175 TIDELVLQR 183 +++E + Q Sbjct: 1294 SVEESIYQL 1302 >gi|320032599|gb|EFW14551.1| SNF2 family helicase/ATPase [Coccidioides posadasii str. Silveira] Length = 1406 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 52/189 (27%), Gaps = 36/189 (19%) Query: 1 MK--QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 MK Y + + +++ I + D + Sbjct: 1131 MKNAIYSDIKSDDLEEIKDIEIS------------------------GSFGTKIDTLARH 1166 Query: 59 LEVIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 L + A IV + S L + + + D + + I Sbjct: 1167 LIWLRHHDPGAKSIVFSQYKSFLGILASAFSRFRIEFSSFDSYNGIERFKQDPSIECFLL 1226 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 H + GLNL + + IE + R + G R V+ + + Sbjct: 1227 HAKAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRETTVWMYLVSD 1280 Query: 175 TIDELVLQR 183 +++E + Q Sbjct: 1281 SVEESIYQL 1289 >gi|291570552|dbj|BAI92824.1| putative helicase [Arthrospira platensis NIES-39] Length = 1182 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 59/170 (34%), Gaps = 10/170 (5%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ--KAF 88 + Q+ G + + + K VI + + + L R + Sbjct: 488 QLSQVIEGEFFTPKPHNSDGEIAPKTLPKLVIFTEHRDTLNYLRDRIRTLLGRPEAVVTI 547 Query: 89 PQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G ++ + + + I +L A + G G+NLQ ++V + L W+ +Q Sbjct: 548 HGGMGREERKKAEEAFKQDVNIQVLVAT-DAAGEGINLQR-AYLMVNYDLPWNPNRLEQR 605 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A T + V L K I+ L Sbjct: 606 FGRI-----HRIGQTEVCHLWNLVAGETREGDVYLSLLRKLEIEQKALGG 650 >gi|307191279|gb|EFN74926.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Camponotus floridanus] Length = 670 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 17/163 (10%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + + N E K ++ L+ I A + I + + + Sbjct: 444 RLKAVCNYVTNLFENKRKCLLYAHHQNILDAICNVAESMKI-----------KYIRIDGK 492 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + Q + G+ L N++VF L+W+ Sbjct: 493 TNSEQRKHQIDQFQERDDYLAAVLSITAANAGVTLTA-ANLVVFTELFWNPGILC----- 546 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R + G V + YL+A+NT D+ + ++ K + + Sbjct: 547 QAEDRVHRIGQNDNVIIQYLVARNTADDYIWPLIKNKLHVLNA 589 >gi|317145065|ref|XP_001819268.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40] Length = 1472 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 49/151 (32%), Gaps = 12/151 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLA---RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + + + ++ + L F G + I ++ + I Sbjct: 1236 RHILWLRHHDPGGKSVIFSQYKDFLEVLAIAFHRFKIGFSSVDSKDGISKFKSDSSIECF 1295 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 F H + GLNL + + IE + R + G R V+ + Sbjct: 1296 FLHARAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRPTTVWMYLV 1349 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 +T++E + + ++ + ++ K E + Sbjct: 1350 SDTVEESIYELSVSRR-LAH-IVQKEKAEPL 1378 >gi|302926211|ref|XP_003054249.1| hypothetical protein NECHADRAFT_30723 [Nectria haematococca mpVI 77-13-4] gi|256735190|gb|EEU48536.1| hypothetical protein NECHADRAFT_30723 [Nectria haematococca mpVI 77-13-4] Length = 1145 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 21/174 (12%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEV-IIEKANAAPIIVAY------HFN----SDLARLQK 86 GA+ E K+ L II+ I+V Y + L Sbjct: 860 GALGPLEAARITSTASSKLSYLIDGIIKYQEDEKIVVFYENENAAWYLASVLETLQIQHL 919 Query: 87 AFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +G T + ++ + +L GL++ + + F S + + Sbjct: 920 IYARGLTNKRKGQYVKTFLVNPDFRVLLMDITQAAFGLDI-RVASRIYFISPVLNPQ--- 975 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +E + R R+ ++ V V L+ N+I+E++++R K + +A K Sbjct: 976 --VEAQAIGRARRISQQKPVSVETLVLSNSIEEIIIER---KQHMTQAEHDAAK 1024 >gi|71907843|ref|YP_285430.1| helicase, C-terminal [Dechloromonas aromatica RCB] gi|71847464|gb|AAZ46960.1| Helicase, C-terminal [Dechloromonas aromatica RCB] Length = 1669 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + EG++ +L A G G N+Q L W + +Q Sbjct: 1308 FVHAAETDVQKATLFKAVREGRVRVLLGSTAKMGVGTNVQTRLTALHHLDAPWRPCDVEQ 1367 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI Q V ++ + + + D + Q L TK+ ++ Sbjct: 1368 REGRILR----QGNECEEVEIFRYVTEGSFDSYMWQTLETKARFIAQVM 1412 >gi|310831496|ref|YP_003970139.1| putative superfamily II helicase [Cafeteria roenbergensis virus BV-PW1] gi|309386680|gb|ADO67540.1| putative superfamily II helicase [Cafeteria roenbergensis virus BV-PW1] Length = 737 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 50/141 (35%), Gaps = 7/141 (4%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF---NSDLARLQKAFPQGRTLDKDPCTI 101 KI + I+ + I+ F +L + T+ K + Sbjct: 598 NGADMFQTSSKISQIIKILNET-DEKFIIYTQFPEIVHNLVEILNKLNIKTTVLKKGSLV 656 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 ++ A + G++L Y N+++F + + + E+ + R + G Sbjct: 657 DF--SVDTRVVVASSTTESSGIDLTYFNNMIIFEPYVHNY-LYMKSYEKQIIGRINRIGQ 713 Query: 162 KRAVFVYYLIAQNTIDELVLQ 182 + V+ LI+ +TI+ + Sbjct: 714 TKHCNVHRLISTDTIESDIYA 734 >gi|209963446|ref|YP_002296361.1| helicase, SNF2 family, putative [Rhodospirillum centenum SW] gi|209956912|gb|ACI97548.1| helicase, SNF2 family, putative [Rhodospirillum centenum SW] Length = 958 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + E ++ A + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 493 RSALVDYFREQG-RIMIAT-EAGAEGINLQF-CSLVVNYDLPWNPQRIEQRIGRC----- 544 Query: 157 RQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + +N D+ V + L K + + + A Sbjct: 545 HRYGQKHDVVVVNFLNRKNEADQRVFRLLSEKFQLFEGVFGA 586 >gi|10176715|dbj|BAB09945.1| unnamed protein product [Arabidopsis thaliana] Length = 1178 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 47/162 (29%), Gaps = 10/162 (6%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-FNSDLARLQKAFPQGRTLDK 96 + + +E+ ++ + A+ ++ F D Sbjct: 523 HPLLSGLDYTPEEIDGDRSSTKM--VVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRD 580 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +Q + ++ + + G GL+ +VF L R Sbjct: 581 RQLAVQSFQFSSEVKIAIIGVEAGGVGLDF-SAAQNVVFLELPKTPSLLL-----QAEDR 634 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G AV VY A++T+DE Q L K + Sbjct: 635 AHRRGQTSAVNVYIFCAKDTMDESNWQNLNKKLHRISSTTDG 676 >gi|330464865|ref|YP_004377766.1| putative helicase [Verrucosispora maris AB-18-032] gi|328813847|gb|AEB48018.1| putative helicase [Verrucosispora maris AB-18-032] Length = 1923 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 7/128 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 DL +++ D D + G + +L G G N+Q L Sbjct: 1263 DLGMPRESVRFIHEADSDKEKANLFAACRNGDVSVLIGSTGRMGTGTNIQNRAVALHHLD 1322 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 W + Q RI Q V +Y + + D Q + K D ++ Sbjct: 1323 CPWRPADITQRDGRILR----QGNQNDEVSIYRYVVTGSFDAFSWQTVARKGGFIDQMMR 1378 Query: 197 ALKKETIH 204 + I Sbjct: 1379 GTEAREIE 1386 >gi|322501081|emb|CBZ36158.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1230 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 47/127 (37%), Gaps = 7/127 (5%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGN 130 +V Y + A + G + + +++ + + + G G+NLQ + Sbjct: 771 LVDYLHSRGWADHAEVLTGGSSEAERLTSVRRFREDPACLFFLLSIKAGGCGINLQA-AH 829 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++V + E + R + G + V YL + ++ V QR K+ Sbjct: 830 MVVLVDRDYTATN-----EDQALARVYRIGQRHTVRAVYLATTDASEQRVAQRAAAKNKP 884 Query: 191 QDLLLNA 197 + ++N Sbjct: 885 RQAIIND 891 >gi|58269458|ref|XP_571885.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21] gi|57228121|gb|AAW44578.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 585 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 6/103 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L + + + + + GLNL N ++F W Sbjct: 459 LDIASTFVGHTLHVQNRRLALDYFETPGVRVCLMDLKLAARGLNLVS-ANRVIFLGPVWS 517 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 L+ ++ + R + G R V L+ + T +E + +R Sbjct: 518 LD-----VQAQAIKRVHRIGQTRPTLVQILVTEGTFEEDIARR 555 >gi|15425711|dbj|BAB64333.1| hypothetical protein [Streptomyces griseus] Length = 724 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 27/86 (31%), Gaps = 5/86 (5%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + + ++ + G ++++ E V Sbjct: 589 PARRQELVDAFSAVDGHAVLLSQIQAGGTGLNMQAASVVILCEPQIKPTL-----EHQAV 643 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDEL 179 R + G R V V+ L+A +++D+ Sbjct: 644 ARAHRMGQVRPVQVHRLLATDSVDQR 669 >gi|83767127|dbj|BAE57266.1| unnamed protein product [Aspergillus oryzae] Length = 1442 Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 49/151 (32%), Gaps = 12/151 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLA---RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + + + ++ + L F G + I ++ + I Sbjct: 1206 RHILWLRHHDPGGKSVIFSQYKDFLEVLAIAFHRFKIGFSSVDSKDGISKFKSDSSIECF 1265 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 F H + GLNL + + IE + R + G R V+ + Sbjct: 1266 FLHARAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRPTTVWMYLV 1319 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 +T++E + + ++ + ++ K E + Sbjct: 1320 SDTVEESIYELSVSRR-LAH-IVQKEKAEPL 1348 >gi|256025065|ref|ZP_05438930.1| Helicase [Escherichia sp. 4_1_40B] Length = 949 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++++ + L + G+NLQ+ ++L+ + L W+ + +Q I R+ Sbjct: 483 KAALVEKFRDEGT--LMICTEAGAEGINLQF-CSLLINYDLPWNPQRVEQRIGRV----- 534 Query: 157 RQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLLNA 197 + G K V V I + D+ V + L K + + + A Sbjct: 535 HRYGQKHDVVVVNFINKGNRADQRVFELLSQKFQLFEGVFGA 576 >gi|66807307|ref|XP_637376.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60465784|gb|EAL63860.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1872 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 6/91 (6%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 Q + + +L G+GLNL + + E+ + R + Sbjct: 1740 AINQFRKDPNVNVLLLPLIKGGNGLNL-IEATHVFLVEPILNPAL-----EKQAINRVHR 1793 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 G + ++ I +NTI+E V+Q + K Sbjct: 1794 FGQNKETNIHRFIIKNTIEEKVVQMNQLKEQ 1824 >gi|83646357|ref|YP_434792.1| SNF2 family DNA/RNA helicase [Hahella chejuensis KCTC 2396] gi|83634400|gb|ABC30367.1| Superfamily II DNA/RNA helicase, SNF2 family [Hahella chejuensis KCTC 2396] Length = 1003 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 66/230 (28%), Gaps = 45/230 (19%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGA---VYYDEEKHWKEV---- 51 +K Y + + G IE +K Y KE Sbjct: 770 LKYYDEV----IASVHGRKIEDKRRIVLPSLLKLKIACIHHDIGSGYTPSNSPKEFLRHA 825 Query: 52 -HDEKIKALEVIIEKANAA-----------------PIIVAYHFNSDLARLQKAFPQGRT 93 + KI+A+ +++ ++ F + T Sbjct: 826 ENSIKIQAMLDVLKDIEKRQEKVLVFATSKAVQAYTSALITTLFKIQAPIVNGDTKAVAT 885 Query: 94 LDK---DPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 I + K +L P + G GL G N ++ W+ + E Sbjct: 886 PKDDLTRKAIIDRFQSEKGFRVLIMSPIAAGVGLT-VVGANNVIHLERHWNPAK-----E 939 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 R + G K+ V VY +A + + D + L K T+ D ++ Sbjct: 940 AQATDRVYRIGQKKNVNVYLPMALHPNLSSFDIQLNTLLNNKVTLSDAVV 989 >gi|328853096|gb|EGG02237.1| hypothetical protein MELLADRAFT_91569 [Melampsora larici-populina 98AG31] Length = 244 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 14/118 (11%) Query: 74 AYHFNSDLARLQKAFPQG--------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 F + G T ++ + N+ I + G GLN+ Sbjct: 61 WRCFMEWIKIALDCHSIGSGTLHGDMTTHERTCQLNRFKNDNNIEAFIVSIEAGGVGLNM 120 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + + W+ + Q + + G V VY+++A ++++ + Sbjct: 121 T-CADEVYLMDAHWNPQIVQ-----QAIDCLHRIGQTHPVKVYHVVAGQSVEQHLFNV 172 >gi|255938726|ref|XP_002560133.1| Pc14g01390 [Penicillium chrysogenum Wisconsin 54-1255] gi|211584754|emb|CAP74280.1| Pc14g01390 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1487 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 22/178 (12%) Query: 35 LANGAVYYDEEKHWKEVHDEKI----KALEVIIEKANAAPIIVAYHFNSDLA----RLQK 86 +++G + + +E + KI + + + E A I+ + S L+ Sbjct: 1231 ISSGHLNEIKNIDLEESYGSKIDTLVRHILWLREHDPGAKSIIFSQYGSFLSSLQAVFGV 1290 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T+D + ++ I H + GLNL + + Q Sbjct: 1291 LEISSTTIDSPDGIEKFKSDPAIECFLLHGKAQASGLNLT-VATHVFLCEPLINTAIELQ 1349 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR--------LRTKSTIQDLLLN 196 +I R+ + G R V+ + T++E + + + K L+ Sbjct: 1350 VIARV-----HRIGQHRPTTVWMYLVSGTVEESIYEISVTRRLTHITEKEKQAKAALS 1402 >gi|296205540|ref|XP_002749811.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Callithrix jacchus] Length = 957 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 58/162 (35%), Gaps = 19/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN-------SDLARLQKAFPQ-- 90 + + ++ I+ + ++ ++ +V H +L R + + Sbjct: 702 ILFFNRTAEAKIPS-VIEYIMDLL-ESGKEKFLVFAHHKVVLDAVMKELERKKVPHIRID 759 Query: 91 -GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + Q++ + + + GL +++VF L+W+ Sbjct: 760 GSTSSAEREDLCQQFQLSQRHAVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLI--- 815 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 816 --QAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 855 >gi|219116552|ref|XP_002179071.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409838|gb|EEC49769.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 233 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 36/106 (33%), Gaps = 6/106 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++ + + + G + L + + F L+W Sbjct: 54 FRQEQITSFQSDPTVRVALLGITAAGVAVTLTA-SSTVWFAELFWTPALMI-----QAED 107 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R + G + V Y +A+ T+D+++ + + K + +K Sbjct: 108 RCHRIGQQAQVKCLYFVAKGTLDDVLWKLIEKKFQDLGEFVEGKEK 153 >gi|291551202|emb|CBL27464.1| DNA methylase [Ruminococcus torques L2-14] Length = 2439 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 59/198 (29%), Gaps = 23/198 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + ++ D +G I A Y + + ++ ++ Sbjct: 1998 QRMLNDMLPDFEGSKINA--------------CVDNIYRIWEKNTDKKSAQLVFCDLSTP 2043 Query: 65 KANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 K + + + R K + T K Q+ +G++ +L Sbjct: 2044 KNDGTFSVYNDIRKKLIERGIPESEVKFIHEADTDMKKKELFQKTRKGEVRVLLGSTQKM 2103 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G N+Q L W + +Q RI Q V +Y + + T D Sbjct: 2104 GAGTNVQDKLIALHDVDCPWRPSDLEQRSGRIVR----QGNENPQVDIYRYVTEQTFDAY 2159 Query: 180 VLQRLRTKSTIQDLLLNA 197 + Q + K ++ + Sbjct: 2160 LYQLVEGKQKFASQIMTS 2177 >gi|42567734|ref|NP_196398.2| SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein [Arabidopsis thaliana] gi|332003824|gb|AED91207.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 1190 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 47/162 (29%), Gaps = 10/162 (6%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-FNSDLARLQKAFPQGRTLDK 96 + + +E+ ++ + A+ ++ F D Sbjct: 535 HPLLSGLDYTPEEIDGDRSSTKM--VVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRD 592 Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +Q + ++ + + G GL+ +VF L R Sbjct: 593 RQLAVQSFQFSSEVKIAIIGVEAGGVGLDF-SAAQNVVFLELPKTPSLLL-----QAEDR 646 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G AV VY A++T+DE Q L K + Sbjct: 647 AHRRGQTSAVNVYIFCAKDTMDESNWQNLNKKLHRISSTTDG 688 >gi|319936976|ref|ZP_08011386.1| superfamily II DNA and RNA helicase [Coprobacillus sp. 29_1] gi|319807912|gb|EFW04491.1| superfamily II DNA and RNA helicase [Coprobacillus sp. 29_1] Length = 2439 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 23/198 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + ++ D +G I A Y K + ++ ++ Sbjct: 1998 QRMLNDMLPDFEGSKINA--------------CVDNIYRIWKENADKKSAQLVFCDLSTP 2043 Query: 65 KANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 K + + + R K + T K Q+ +G++ +L Sbjct: 2044 KNDGTFSVYNDIRKKLIERGIPESEVKFIHEADTDMKKKELFQKTRKGEVRVLLGSTQKM 2103 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G N+Q L W + +Q RI Q V +Y + + T D Sbjct: 2104 GAGTNVQDKLIALHDVDCPWRPSDLEQRSGRIVR----QGNENPQVDIYRYVTEQTFDAY 2159 Query: 180 VLQRLRTKSTIQDLLLNA 197 + Q + K ++ + Sbjct: 2160 LYQLVEGKQKFASQIMTS 2177 >gi|225155242|ref|ZP_03723736.1| helicase domain protein [Opitutaceae bacterium TAV2] gi|224803997|gb|EEG22226.1| helicase domain protein [Opitutaceae bacterium TAV2] Length = 1642 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + ++ GK+ +L G G N+Q W + +Q Sbjct: 1256 FIQDYDTDAEKVSLFKDVRAGKVRVLLGSTQKMGAGTNVQSLLVAEHHLDAPWRPADIEQ 1315 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + + + D + Q L TK+ ++ Sbjct: 1316 REGRILR----QGNTNPVVKIFRYVTEGSFDAYMWQTLETKAKFISQVMQG 1362 >gi|209523622|ref|ZP_03272176.1| helicase domain protein [Arthrospira maxima CS-328] gi|209496027|gb|EDZ96328.1| helicase domain protein [Arthrospira maxima CS-328] Length = 1175 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 68/219 (31%), Gaps = 34/219 (15%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQL-------------A----------NGAVY 41 K + E DL + ++ + QL N Sbjct: 440 EKIETE-VVDLATASRTVQELQTEIERLRQLEELAQRVRRSGKDCKWEQLSKVMENEIFA 498 Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI 101 + ++ +K VI + + + L R + ++ +D Sbjct: 499 FPNPQNGDHEPGQKALRKLVIFTEHRDTLNYLRDRIKTLLGRPEAVVTIHGSMGRDERKK 558 Query: 102 ---QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + +L A + G G+NLQ +++V + L W+ +Q RI + Sbjct: 559 AEEDFKQDVTVQVLVAT-DAAGEGINLQR-AHLMVNYDLPWNPNRLEQRFGRI-----HR 611 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 G ++ L+A T + V L K I+ L Sbjct: 612 IGQTEVCHLWNLVAGETREGDVYLSLLRKLEIEQNALGG 650 >gi|331028047|ref|YP_004421762.1| DNA methylase [Synechococcus phage S-CBS3] gi|294805660|gb|ADF42498.1| DNA methylase [Synechococcus phage S-CBS3] Length = 754 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 47/101 (46%), Gaps = 4/101 (3%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +G I +L + P+ CG G+N Q + + F L E Q I R Q+Q Sbjct: 341 FQQGTIRVLVSKPSICGFGMNFQQ-CHNVAFVGLSHSYEAFYQAIRRCWRYGQQQPVQAH 399 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + Y +A+ + + + ++ + + + +++ +K+ T+ Sbjct: 400 ---IIYDVAEGAVVQNIRRKESESTAMAEAMVSIMKESTMQ 437 >gi|322815488|gb|EFZ24135.1| DNA repair protein, putative [Trypanosoma cruzi] Length = 142 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 96 KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + +Q + ++ + + + G GLNLQ N ++ WW+ Sbjct: 27 QRQAVLQAFLHDPGVRAILISLKAGGEGLNLQ-VANHVILVDPWWNPAVEM-----QAAQ 80 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V V + + +++E ++ K + + ++ Sbjct: 81 RAHRIGQTKPVRVVRFVVERSVEERMMDLQDKKMLVIEGTIDG 123 >gi|70932532|ref|XP_737773.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56513438|emb|CAH86839.1| hypothetical protein PC302186.00.0 [Plasmodium chabaudi chabaudi] Length = 99 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%) Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 ++ +R R + G K+ V++Y L +NTI+E V + + K + Sbjct: 1 QDWNPPNDRQAEDRVHRLGQKKEVYIYRLCCKNTIEETVFKCCKAKLHLDQA 52 >gi|300123786|emb|CBK25057.2| unnamed protein product [Blastocystis hominis] Length = 169 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + +I +L A CGHG +L ++++ ++ ++ Sbjct: 50 CAEKRMEYVEHFQTDNEISILLATTGICGHGFSLTA-ASVVILVDHNFNP-----YVDVQ 103 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + R + G K AV VY L++ +E +++ Sbjct: 104 AIDRCHRIGQKNAVMVYRLVSNEPNEERLMK 134 >gi|146093740|ref|XP_001466981.1| hypothetical protein [Leishmania infantum JPCM5] gi|134071345|emb|CAM70031.1| hypothetical protein, unknown function [Leishmania infantum JPCM5] Length = 1230 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 47/127 (37%), Gaps = 7/127 (5%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGN 130 +V Y + A + G + + +++ + + + G G+NLQ + Sbjct: 771 LVDYLHSRGWADYAEVLTGGSSEAERLTSVRRFREDPACLFFLLSIKAGGCGINLQA-AH 829 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++V + E + R + G + V YL + ++ V QR K+ Sbjct: 830 MVVLVDRDYTATN-----EDQALARVYRIGQRHTVRAVYLATTDASEQRVAQRAAAKNKP 884 Query: 191 QDLLLNA 197 + ++N Sbjct: 885 RQAIIND 891 >gi|6693793|gb|AAF24985.1|AF088884_1 HepA-related protein Harp [Mus musculus] Length = 910 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 47/133 (35%), Gaps = 8/133 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-DPCTIQEWN-EGKIPLLFAHPA 117 E + A+ I+ A + +Q G + Q + + Sbjct: 684 EKFLVFAHHKVILDAVAKELERKNVQHIRIDGSRPTRARELKCQRFQLSKGHTVALLSIP 743 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GL +++VF L+W+ R + G +V ++YL+A+ T D Sbjct: 744 AANMGLTF-STADLVVFAELFWNPGVLI-----QAEDRVHRIGQTNSVSIHYLVAKGTAD 797 Query: 178 ELVLQRLRTKSTI 190 + + ++ K + Sbjct: 798 DYLWPLIQEKIKV 810 >gi|157157048|ref|YP_001464327.1| SNF2 family helicase [Escherichia coli E24377A] gi|157079078|gb|ABV18786.1| helicase, SNF2 family [Escherichia coli E24377A] Length = 951 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++++ + L + G+NLQ+ ++L+ + L W+ + +Q I R+ Sbjct: 485 KAALVEKFRDEGT--LMICTEAGAEGINLQF-CSLLINYDLPWNPQRVEQRIGRV----- 536 Query: 157 RQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLLNA 197 + G K V V I + D+ V + L K + + + A Sbjct: 537 HRYGQKHDVVVVNFINKGNRADQRVFELLSQKFQLFEGVFGA 578 >gi|77163610|ref|YP_342135.1| Type III restriction enzyme, res subunit [Nitrosococcus oceani ATCC 19707] gi|254434998|ref|ZP_05048505.1| Type III restriction enzyme, res subunit family [Nitrosococcus oceani AFC27] gi|76881924|gb|ABA56605.1| Type III restriction enzyme, res subunit [Nitrosococcus oceani ATCC 19707] gi|207088109|gb|EDZ65381.1| Type III restriction enzyme, res subunit family [Nitrosococcus oceani AFC27] Length = 962 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 72/207 (34%), Gaps = 33/207 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAF-----NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y +EL +L ++ A + + A E+ + I Sbjct: 434 ELYDMDGQELLDELLKSHVLALQSEGSHVETLL--------DAAVRCEQAGPDAKAEALI 485 Query: 57 KALEVIIEKAN--AAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 + + + + N +++ F L++ ++ + Sbjct: 486 EWIYELQAEENEPDLKVLIFTEFVPTQEMLKEFLEARGISVVTLNGSMDMEVRGAAQDTF 545 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + +L + G GLNLQ+ ++++ + + W+ +Q I R+ + G + Sbjct: 546 RKSH-RVLL-STDAGGEGLNLQF-AHVIINYDIPWNPMRLEQRIGRVD-----RIGQPKM 597 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQ 191 V + +++++ V + L K ++ Sbjct: 598 VRAINFVFEDSVEFRVREVLEQKLSVI 624 >gi|312377236|gb|EFR24119.1| hypothetical protein AND_11532 [Anopheles darlingi] Length = 185 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 13/135 (9%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-----TIQEWNEGK--IPL 111 ++ + I++ H+ S +L A + ++ + E+ + + Sbjct: 31 VKELKAAEPDVKIVIFSHWESIQVKLAAALKENGVTYREKSQKFFLAVDEFKDYSAGVTC 90 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L GLNL + + E QQ I R+ + G R V+ I Sbjct: 91 LLMPLRFGSKGLNLTE-ATHVFLVEPILNPGEEQQAIGRV-----HRIGQTRPTVVHRFI 144 Query: 172 AQNTIDELVLQRLRT 186 TI+E + + ++ Sbjct: 145 VLRTIEEKIHETIQQ 159 >gi|159480590|ref|XP_001698365.1| predicted protein [Chlamydomonas reinhardtii] gi|158282105|gb|EDP07858.1| predicted protein [Chlamydomonas reinhardtii] Length = 1182 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 27/90 (30%), Gaps = 6/90 (6%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ-YGGNILVFFSLWWDLEEHQQMIE 149 G + ++ K +L ++ G L + + E Sbjct: 1081 GNPEARQAALQTFLHDRKCRVLLLMKSTSGGAAGLTLTVAHTAFMLEPALNPGL-----E 1135 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 R + G V +IA++T++E Sbjct: 1136 AQAAARICRLGQDWPTRVVRIIAKDTVEER 1165 >gi|220674521|emb|CAR69082.1| putative conjugative transposon DNA recombination protein [Streptococcus pneumoniae ATCC 700669] Length = 2088 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 14/130 (10%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +K ++ N G++ +L A G GLN+Q + + W + Q+ Sbjct: 1700 FVHDANSDEKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQR 1759 Query: 147 MIERIGVTRQR------------QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + R+ Q + V +Y+ I + + D + K + Sbjct: 1760 ASVKAVMVRRWVLSLQRNGRIIRQGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQI 1819 Query: 195 LNALKKETIH 204 + + KE I Sbjct: 1820 MTS--KEPIR 1827 >gi|325833145|ref|ZP_08165693.1| helicase C-terminal domain protein [Eggerthella sp. HGA1] gi|325485701|gb|EGC88168.1| helicase C-terminal domain protein [Eggerthella sp. HGA1] Length = 1860 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 4/91 (4%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G++ +L G G N+Q L W + Q RI Q V Sbjct: 1280 SGEVRVLMGSTQKLGEGTNVQTRLVALHHLDCPWRPSDLAQREGRILR----QGNENGEV 1335 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Y + + T D + Q + K + Sbjct: 1336 GIYRYVTKGTFDSYMYQTVENKQRFISQVFG 1366 >gi|325832284|ref|ZP_08165283.1| methyltransferase domain protein [Eggerthella sp. HGA1] gi|325486120|gb|EGC88574.1| methyltransferase domain protein [Eggerthella sp. HGA1] Length = 2013 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 4/93 (4%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G + +L G G N+Q + W + QQ + RI Q Sbjct: 1666 NAGAVRILMGSTQKMGAGTNVQRRLAAIHDLDCPWRPADLQQRLGRIER----QGNMNAE 1721 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V Y + + T D + Q + K ++ + Sbjct: 1722 VEAYRYVTEGTFDAYLYQLVEGKQRFIAQVMTS 1754 >gi|317489197|ref|ZP_07947715.1| methyltransferase domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316911705|gb|EFV33296.1| methyltransferase domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 2013 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 4/93 (4%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G + +L G G N+Q + W + QQ + RI Q Sbjct: 1666 NAGAVRILMGSTQKMGAGTNVQRRLAAIHDLDCPWRPADLQQRLGRIER----QGNMNAE 1721 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V Y + + T D + Q + K ++ + Sbjct: 1722 VEAYRYVTEGTFDAYLYQLVEGKQRFIAQVMTS 1754 >gi|289764892|ref|ZP_06524270.1| superfamily II DNA and RNA helicase [Fusobacterium sp. D11] gi|289716447|gb|EFD80459.1| superfamily II DNA and RNA helicase [Fusobacterium sp. D11] Length = 1914 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + G+I +L G G N+Q L + W + +Q Sbjct: 1584 FIHDANNEKQKDEIFSKVRSGEIRVLIGSTQKMGAGTNVQTKLIALHDLDVPWRPADLEQ 1643 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V VY + +NT D + Q + K ++ + Sbjct: 1644 RAGRIVR----QGNENKNVEVYRYVTENTFDAYLWQTIENKQKFISQIMTS 1690 >gi|289679709|ref|ZP_06500599.1| SNF2-related:helicase, C-terminal:SWIM Zn-finger [Pseudomonas syringae pv. syringae FF5] Length = 339 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 51/134 (38%), Gaps = 14/134 (10%) Query: 6 KFQRELYCDLQGENIEAFNS--ASKTVKCLQLANGAVYYDEEK--HWKEVHDEKIKALEV 61 +++ ++ + + +K Q+ +++ + K+ K+ +L Sbjct: 206 AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNQDMPVNSKQGTSGKLNSLME 265 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAFPQ--------GRTLDKDPCTIQEWNEGKIPL 111 + E+ A I++ F S L+ +++ Q + I ++ GK+P+ Sbjct: 266 MFEELLAEGRKILLFSQFTSMLSLIEEELKQRGIAYALLTGSTRDRRTPIHDFQSGKLPI 325 Query: 112 LFAHPASCGHGLNL 125 + G GLNL Sbjct: 326 FLISLKAGGTGLNL 339 >gi|256026903|ref|ZP_05440737.1| helicase [Fusobacterium sp. D11] Length = 1923 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + G+I +L G G N+Q L + W + +Q Sbjct: 1593 FIHDANNEKQKDEIFSKVRSGEIRVLIGSTQKMGAGTNVQTKLIALHDLDVPWRPADLEQ 1652 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V VY + +NT D + Q + K ++ + Sbjct: 1653 RAGRIVR----QGNENKNVEVYRYVTENTFDAYLWQTIENKQKFISQIMTS 1699 >gi|154498723|ref|ZP_02037101.1| hypothetical protein BACCAP_02714 [Bacteroides capillosus ATCC 29799] gi|150272263|gb|EDM99461.1| hypothetical protein BACCAP_02714 [Bacteroides capillosus ATCC 29799] Length = 2062 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 1679 FIHEANTEVRKKELFAKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 1738 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + K ++ + Sbjct: 1739 RKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 1785 >gi|323448194|gb|EGB04096.1| hypothetical protein AURANDRAFT_33074 [Aureococcus anophagefferens] Length = 79 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 5/66 (7%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N ++ + W+ + + R + G RA V L+ + TI+E ++ R K Sbjct: 16 ANFMMLLNPSWNPAQ-----DEQAAMRIHRIGQSRACTVIRLVGRGTIEETIVGRQAEKD 70 Query: 189 TIQDLL 194 + +L Sbjct: 71 GLCAIL 76 >gi|218696569|ref|YP_002404236.1| Helicase [Escherichia coli 55989] gi|218353301|emb|CAU99275.1| Helicase [Escherichia coli 55989] Length = 955 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++++ + L + G+NLQ+ ++L+ + L W+ + +Q I R+ Sbjct: 489 KAALVEKFRDEGT--LMICTEAGAEGINLQF-CSLLINYDLPWNPQRVEQRIGRV----- 540 Query: 157 RQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLLNA 197 + G K V V I + D+ V + L K + + + A Sbjct: 541 HRYGQKHDVVVVNFINKGNRADQRVFELLSQKFQLFEGVFGA 582 >gi|315645020|ref|ZP_07898146.1| SNF2-related protein [Paenibacillus vortex V453] gi|315279441|gb|EFU42746.1| SNF2-related protein [Paenibacillus vortex V453] Length = 933 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 11/121 (9%), Positives = 32/121 (26%), Gaps = 17/121 (14%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASK--TVKCLQLANGAVYYD--EEKHWKEVHDEKIKA 58 Y ++ ++ A K Q+ + E + + K++ Sbjct: 802 MYQAVVDDMMGQIESRTGMARKGLVLSSLTKLKQICDHPQLLRRDEGRAVRAESSGKMER 861 Query: 59 LEVIIEKAN--AAPIIVAYHF-------NSDLARLQ----KAFPQGRTLDKDPCTIQEWN 105 + I++ + ++ + S L R G + ++ + Sbjct: 862 MLEILDSISDVGESALIFTQYVGMGELLVSMLGRKYGKRPYFLHGGVPKRERDEMVRAFQ 921 Query: 106 E 106 Sbjct: 922 A 922 >gi|154496923|ref|ZP_02035619.1| hypothetical protein BACCAP_01216 [Bacteroides capillosus ATCC 29799] gi|150273881|gb|EDN00994.1| hypothetical protein BACCAP_01216 [Bacteroides capillosus ATCC 29799] Length = 2317 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 2166 FIHEANTEVRKKELFAKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 2225 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + K ++ + Sbjct: 2226 RKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 2272 >gi|160914103|ref|ZP_02076325.1| hypothetical protein EUBDOL_00111 [Eubacterium dolichum DSM 3991] gi|158433914|gb|EDP12203.1| hypothetical protein EUBDOL_00111 [Eubacterium dolichum DSM 3991] Length = 2685 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 2302 FIHEANTEVRKKELFSKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 2361 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + K ++ + Sbjct: 2362 RKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 2408 >gi|194706134|gb|ACF87151.1| unknown [Zea mays] Length = 139 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 26/49 (53%) Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +++ + R + G R V VY L +++E ++++ K ++ +++ Sbjct: 1 MDQQAMDRCHRIGQTRPVHVYRLATSYSVEERIIKKAFGKLKLEHVVIG 49 >gi|26335537|dbj|BAC31469.1| unnamed protein product [Mus musculus] Length = 263 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 40/108 (37%), Gaps = 6/108 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + + D++ + + + GL +++VF L+W+ Sbjct: 62 QHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTF-STADLVVFAELFWNPG 120 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 121 VLI-----QAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKV 163 >gi|321156809|emb|CBW38793.1| putative conjugative transposon DNA recombination protein [Streptococcus pneumoniae] Length = 2091 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 14/130 (10%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +K ++ N G++ +L A G GLN+Q + + W + Q+ Sbjct: 1703 FVHDANSDEKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQR 1762 Query: 147 MIERIGVTRQR------------QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + R+ Q + V +Y+ I + + D + K + Sbjct: 1763 ASVKAVMVRRWVLSLQRNGRIIRQGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQI 1822 Query: 195 LNALKKETIH 204 + + KE I Sbjct: 1823 MTS--KEPIR 1830 >gi|218199966|gb|EEC82393.1| hypothetical protein OsI_26740 [Oryza sativa Indica Group] Length = 1165 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 11/168 (6%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-FNSDLARLQKAFPQGRTLDKD 97 E + + + I A+ ++ F ++ + + Sbjct: 542 HFIMKEPADNGSLDSQ--SNCQKTIIFAHHLKVLDGVQVFVTEQRIKYVRIDGSTSPRER 599 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + ++ + + G GL+ +VF L E R Sbjct: 600 KDAVDSFRLNPEVMVAIIGITAGGVGLDF-SSAQNVVFVELPKSASELL-----QAEDRA 653 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G AV +Y A+NT+DE L L+N KK+ I Sbjct: 654 HRRGQTNAVNIYIFCARNTLDESHWLHLNQSLFRVSSLMNG-KKDAIR 700 >gi|149710126|ref|XP_001490055.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Equus caballus] Length = 948 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 8/136 (5%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWN-EGKIPLLFAHPA 117 E + A+ ++ A + +Q G T Q++ + + Sbjct: 727 EKFLVFAHHKVVLDAITKELERKHVQHIRIDGATSSADREALCQQFQLSERHAVAVLSIT 786 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GL +++VF L+W+ R + G R+V ++YL+A+ T D Sbjct: 787 AANMGLTF-SSADLVVFAELFWNPGVLI-----QAEDRVHRIGQSRSVGIHYLVARGTAD 840 Query: 178 ELVLQRLRTKSTIQDL 193 + + ++ K I Sbjct: 841 DYLWPLIQEKIKILSE 856 >gi|58260784|ref|XP_567802.1| DNA repair protein rad8 [Cryptococcus neoformans var. neoformans JEC21] gi|57229883|gb|AAW46285.1| DNA repair protein rad8, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 1856 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 6/101 (5%) Query: 97 DPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM-IERIG 152 T+ + N +L + N +F + +E Sbjct: 1745 RANTLDRFQSTNADTARVLLLKMNDASAAGSNLTTANHAIFLGPLFTNSLFNYRAVETQA 1804 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVL--QRLRTKSTIQ 191 + R R+ G ++ V ++ L+A +TID + +R K Sbjct: 1805 IGRVRRYGQQKKVHIHRLLALDTIDMTIFNTRRAELKEKTD 1845 >gi|297736548|emb|CBI25419.3| unnamed protein product [Vitis vinifera] Length = 1635 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + ++ E G +L A +C G++L + ++ W+ + + Sbjct: 1451 FERGRVMDQFEEPGGASKVLLASITACAEGISLTA-ASRVILLDTEWNPSKQ-----KQA 1504 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V R + G +R V+VY L+ +T++E R K + ++ + Sbjct: 1505 VARAFRPGQERVVYVYQLLETDTLEEEKNSRTNWKEWVSSMIFSE 1549 >gi|298712931|emb|CBJ26833.1| conserved unknown protein [Ectocarpus siliculosus] Length = 1672 Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 34/103 (33%), Gaps = 7/103 (6%) Query: 91 GRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 GRT + + + N+ I ++ S GL + + W + E Sbjct: 1388 GRTRVERSSAVSSFTNDPSIKVILLTTGSAAAGLT-LTAASTVYMLDPVWSAAD-----E 1441 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 + R + G V +++++E +L +K Sbjct: 1442 AQALNRAHRIGQTHTVRCVVFYMKDSVEERLLALRHSKGNFAQ 1484 >gi|99035906|ref|ZP_01314955.1| hypothetical protein Wendoof_01000201 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 73 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 29/52 (55%) Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 +E R + G +R V VY L++ T +E + + +++K + +L +++ + Sbjct: 1 MEAQATDRAYRIGQERNVMVYRLLSTGTFEERIDEMIQSKKELANLTISSGE 52 >gi|74005708|ref|XP_536062.2| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 [Canis familiaris] Length = 961 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 56/176 (31%), Gaps = 18/176 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL---- 81 + K Q A+ + + I+ + ++ ++ +V H L Sbjct: 691 MTTMDKTKQQQKEALLLFFNRTAEAKIPSVIEYILDLL-ESGREKFLVFAHHKVVLSAVT 749 Query: 82 ------ARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVF 134 + Q++ + + + GL +++VF Sbjct: 750 RELEKKHVPHIHIDGSTSSADREDLCQQFQLFEKHAVAVLSITAANMGLTFTS-ADLVVF 808 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 L+W+ R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 809 AELFWNPGVLL-----QAEDRVHRIGQSSSVSIHYLVAKGTADDYLWPLIQEKIKV 859 >gi|167518191|ref|XP_001743436.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778535|gb|EDQ92150.1| predicted protein [Monosiga brevicollis MX1] Length = 980 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 11/110 (10%) Query: 96 KDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + I+ + ++ LL A ++L + ++ F WD I RI Sbjct: 461 ERHQRIEAFSTSPRMGLLIACTKIGRLNIDLTT-ASRVIIFDAAWDALSDTSAIARI--- 516 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G R VF+Y L+A T+D L+ + K+ + + + KK+++ Sbjct: 517 --YRYGQTRPVFIYRLVAAGTLDVLLHRPQSNKARLTNYV----KKDSLE 560 >gi|126727279|ref|ZP_01743115.1| helicase [Rhodobacterales bacterium HTCC2150] gi|126703488|gb|EBA02585.1| helicase [Rhodobacterales bacterium HTCC2150] Length = 963 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 43/102 (42%), Gaps = 8/102 (7%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + ++ S G+NLQ+ ++L+ F L W+ + +Q I R Sbjct: 501 KAALVEAFKSSNKSIMI-STESGAEGINLQF-CSVLINFDLPWNPQRIEQRIGRC----- 553 Query: 157 RQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V ++ +N + + + L K + D + + Sbjct: 554 HRYGQKIDVTVVNMLNRKNHTEARIFELLNEKFKLFDGVFGS 595 >gi|134081676|emb|CAK46610.1| unnamed protein product [Aspergillus niger] Length = 1189 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 19/166 (11%) Query: 50 EVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKA-----FPQGRTLDKDPCT 100 + K+ + I+ + + I++ F + L +P K Sbjct: 974 HMPSAKLTKIREILTEWLAQDSPGKIVIFTQFLDFVQILATMCQAENWPYVLLTGKLSLA 1033 Query: 101 IQEWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ--MIERI 151 ++E N + + ++ A + G GL+L N + LWW+ +Q + Sbjct: 1034 VRENNMTLFSDKDSEKRIMIASLKAGGTGLDL-SAANKCILVDLWWNEAIQEQLLTLPFQ 1092 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V LI +N+ID+ +L K+ I + Sbjct: 1093 AFCRLFRIGQESEVEFVKLIIENSIDDYLLNLQTHKTAIITGAMGE 1138 >gi|134117273|ref|XP_772863.1| hypothetical protein CNBK2340 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255481|gb|EAL18216.1| hypothetical protein CNBK2340 [Cryptococcus neoformans var. neoformans B-3501A] Length = 2291 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 6/101 (5%) Query: 97 DPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM-IERIG 152 T+ + N +L + N +F + +E Sbjct: 2180 RANTLDRFQSTNADTARVLLLKMNDASAAGSNLTTANHAIFLGPLFTNSLFNYRAVETQA 2239 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVL--QRLRTKSTIQ 191 + R R+ G ++ V ++ L+A +TID + +R K Sbjct: 2240 IGRVRRYGQQKKVHIHRLLALDTIDMTIFNTRRAELKEKTD 2280 >gi|297607570|ref|NP_001060181.2| Os07g0598300 [Oryza sativa Japonica Group] gi|255677946|dbj|BAF22095.2| Os07g0598300 [Oryza sativa Japonica Group] Length = 1158 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 11/168 (6%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-FNSDLARLQKAFPQGRTLDKD 97 E + + + I A+ ++ F ++ + + Sbjct: 506 HFIMKEPADNGSLDSQ--SNCQKTIIFAHHLKVLDGVQVFVTEQRIKYVRIDGSTSPRER 563 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + ++ + + G GL+ +VF L E R Sbjct: 564 KDAVDSFRLNPEVMVAIIGITAGGVGLDF-SSAQNVVFVELPKSASELL-----QAEDRA 617 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G AV +Y A+NT+DE L L+N KK+ I Sbjct: 618 HRRGQTNAVNIYIFCARNTLDESHWLHLNQSLFRVSSLMNG-KKDAIR 664 >gi|222640173|gb|EEE68305.1| hypothetical protein OsJ_26567 [Oryza sativa Japonica Group] Length = 776 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 7/94 (7%) Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N +LF + G G++L G + +V + + R + Sbjct: 643 QLAMDQFNGSADAKVLFGSIKAFGEGISL-VGASRIVILDVHLNPSVT-----RQAIGST 696 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G K+ VFVY L+A ++ +E + K I Sbjct: 697 FRPGQKKKVFVYRLVAADSPEEKAHETAFNKEVI 730 >gi|317482924|ref|ZP_07941929.1| LOW QUALITY PROTEIN: hypothetical protein HMPREF0177_01324 [Bifidobacterium sp. 12_1_47BFAA] gi|316915613|gb|EFV37030.1| LOW QUALITY PROTEIN: hypothetical protein HMPREF0177_01324 [Bifidobacterium sp. 12_1_47BFAA] Length = 1899 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 4/115 (3%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 ++ G + + G+I +L G G N+Q + W Sbjct: 1532 QIAFVHDAGDNPARREQLFAKVRSGEIRVLMGSTQKLGTGTNVQERLAAIHDLDCPWRPA 1591 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +Q + RI QRQ V Y + + T D Q + K L+++ Sbjct: 1592 DLEQRLGRI----QRQGNTYDHVRDYRYVTEGTFDAYSYQTVERKQRFISQLMSS 1642 >gi|89885953|ref|YP_516151.1| SNF2-related [Rhodoferax ferrireducens T118] gi|89347951|gb|ABD72153.1| SNF2-related [Rhodoferax ferrireducens T118] Length = 582 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 42/140 (30%), Gaps = 5/140 (3%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 + A E + + + + + T + + G ++ Sbjct: 401 MLMASEEKVILFGWHREVYGIWLELLAEFKPMLYTGSESPKQKAATKEAFVNGDCRVMII 460 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + LQ + VF L W H+Q R + G Y+L++++ Sbjct: 461 SLRAGAGLDGLQRVCKVGVFGELDWSPGVHEQCGGR-----YWRDGQDEPSLAYFLLSED 515 Query: 175 TIDELVLQRLRTKSTIQDLL 194 D ++ L K D + Sbjct: 516 GSDPVIADILGLKKGQIDGV 535 >gi|310827499|ref|YP_003959856.1| hypothetical protein ELI_1910 [Eubacterium limosum KIST612] gi|308739233|gb|ADO36893.1| hypothetical protein ELI_1910 [Eubacterium limosum KIST612] Length = 2497 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + ++ + + +L G G+N Q L W + +Q Sbjct: 2131 FIHDAGTDKQKTALFKKVRKADVRVLMGSTEKMGAGMNAQDKLIALHHADCPWRPADLEQ 2190 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY I + T D Q + K ++ + Sbjct: 2191 QEGRIVR----QGNQYEEVNVYRYITEGTFDAYSWQVIEQKQQFISQIMTS 2237 >gi|291530979|emb|CBK96564.1| DNA methylase [Eubacterium siraeum 70/3] Length = 2949 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 2566 FIHEANTEVRKKELFSKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 2625 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + K ++ + Sbjct: 2626 RKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 2672 >gi|222637395|gb|EEE67527.1| hypothetical protein OsJ_24993 [Oryza sativa Japonica Group] Length = 1174 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 11/168 (6%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-FNSDLARLQKAFPQGRTLDKD 97 E + + + I A+ ++ F ++ + + Sbjct: 542 HFIMKEPADNGSLDSQ--SNCQKTIIFAHHLKVLDGVQVFVTEQRIKYVRIDGSTSPRER 599 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + ++ + + G GL+ +VF L E R Sbjct: 600 KDAVDSFRLNPEVMVAIIGITAGGVGLDF-SSAQNVVFVELPKSASELL-----QAEDRA 653 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G AV +Y A+NT+DE L L+N KK+ I Sbjct: 654 HRRGQTNAVNIYIFCARNTLDESHWLHLNQSLFRVSSLMNG-KKDAIR 700 >gi|157872353|ref|XP_001684725.1| hypothetical protein [Leishmania major strain Friedlin] gi|68127795|emb|CAJ06200.1| hypothetical protein LMJF_30_1300 [Leishmania major strain Friedlin] Length = 1235 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 50/127 (39%), Gaps = 7/127 (5%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGN 130 +V Y ++ A + G + + +++ + + + G G+NLQ + Sbjct: 776 LVDYLYSRGWADHAEVLTGGSSEAERLTSVRRFREDPGCLFFLLSIKAGGCGINLQA-AH 834 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++V + + E + R + G + V YL ++ ++ V QR K+ Sbjct: 835 MVVLVDRDYTVTN-----EDQALARVYRIGQRYTVRAVYLATTDSSEQHVAQRATAKNKP 889 Query: 191 QDLLLNA 197 + ++N Sbjct: 890 RQAIIND 896 >gi|206890396|ref|YP_002248483.1| swi/snf family helicase_2 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742334|gb|ACI21391.1| swi/snf family helicase_2 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 540 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 2/86 (2%) Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM--IERIGVTRQRQAGFKRAVFVYYLIA 172 + H L + + + + R + G K+ VFV L Sbjct: 429 TSVTVQHIWALISKLKQICNLDPISNESCKLEYLPVAIQTEDRTHRIGQKKTVFVSSLFT 488 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNAL 198 NTI+E + L K + +++ L Sbjct: 489 VNTIEERIQNILNKKKQLFKEVIDHL 514 >gi|71029760|ref|XP_764523.1| DNA helicase [Theileria parva strain Muguga] gi|68351477|gb|EAN32240.1| DNA helicase, putative [Theileria parva] Length = 941 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 65/212 (30%), Gaps = 46/212 (21%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA 74 + +++ + S K QL + K +E I+E N I Sbjct: 720 YKEGDVKRAH-MSLMAKLFQLT-----------GESKTKGVCKYIEEILENQNKFIIFAH 767 Query: 75 YHFNSDLARL--------QKAFPQGRTLDKDPCTIQEWN--------------------- 105 + F D ++ + + Sbjct: 768 HMFMMDAIEDTLRSKKVGYIRIDGSTKMNDRAKLVNLFQNTNESTKHEGKVDKVEDEDSP 827 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + SCG GLNL + ++F L+W Q +R+ + Sbjct: 828 DYTVRVALLSLTSCGVGLNLTS-SSTVIFAELYWVPGVLLQAEDRVHRI----GTKFNKI 882 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + YLIAQN+++E++ + + K L+ Sbjct: 883 NINYLIAQNSVEEVMWKVINKKYKTVTSTLDG 914 >gi|291227441|ref|XP_002733693.1| PREDICTED: RAD54 homolog B-like [Saccoglossus kowalevskii] Length = 921 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 28/251 (11%), Positives = 65/251 (25%), Gaps = 80/251 (31%) Query: 1 MKQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE--------- 50 +K Y++ + + +L N V+ ++ Sbjct: 595 LKVYNQLISSSIIRSVLTSSYNGMTHLLCLSALKKLCNHPVFVYRHAKLQDETCVDGEEN 654 Query: 51 --------------------------VHDEKIKALEVIIEKANA----APIIVAYHFNSD 80 K+ L +++ + ++V ++ Sbjct: 655 VQEILYRDVCSSFPERYRDESNAVDYTDSGKLIVLAAMLKSFHNDTPQQRVVVVSNYTQT 714 Query: 81 LARLQK-AFPQGRTLDK---------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYG 128 L LQ+ +G T + + + + + G GLNL G Sbjct: 715 LDLLQQLCDKEGYTYGRLDGSTPTATRQDIVNRFTSKYSDQFVFLLSCKAGGVGLNL-IG 773 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 L+ + + W+ Q +I+E + QR +K Sbjct: 774 AARLILYDIDWNPANDLQ---------------------------GSIEEKIYQRQISKQ 806 Query: 189 TIQDLLLNALK 199 + +++ K Sbjct: 807 GLSGAVVDYRK 817 >gi|156031343|ref|XP_001584996.1| hypothetical protein SS1G_14093 [Sclerotinia sclerotiorum 1980] gi|154699495|gb|EDN99233.1| hypothetical protein SS1G_14093 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1098 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 32/84 (38%), Gaps = 5/84 (5%) Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G + ++ W+ + + R + G K VY L++Q T Sbjct: 445 ITEAGGLGLNLAAASEVILLDQDWNPQVT-----NQAICRAYRVGLKSPPIVYQLVSQGT 499 Query: 176 IDELVLQRLRTKSTIQDLLLNALK 199 ++E ++ R+ K + + +++ Sbjct: 500 VEEQMMPRIAKKPYLLAKVTESME 523 >gi|332112207|gb|EGJ12183.1| putative dEAD/DEAH box helicase, SNF2 family protein [Rubrivivax benzoatilyticus JA2] Length = 911 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 20/211 (9%) Query: 8 QRELYCDLQGENIEAFNSAS-KTVKCLQLANGA-----VYYDEEKHWKEV----HDEKIK 57 + E Y +L + + + ++ +YY + + W E+ + Sbjct: 648 KDEGYAELAVDTSNEREALERLLNRLERIDADPKLAALLYYLDREKWLELGVIVFSQYYD 707 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + E+ A + R + + + E +I ++ A Sbjct: 708 TARWLAEQLARRYPAEAIGLYAGAGRSRLYQRGDSVSCERETLKKMVAEHQIRIMVAT-D 766 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GLNLQ G ++ L W+ +Q I RI Q++ V + L+ + T+D Sbjct: 767 AACEGLNLQTLGTLVN-VDLPWNPTRLEQRIGRIKRFGQKRD----TVDMLNLVNEQTVD 821 Query: 178 ELVLQRLRTKS----TIQDLLLNALKKETIH 204 E + RL + + + + +K E I Sbjct: 822 EKIYDRLSERMRDRYDLFGSIPDTIKDEWID 852 >gi|302831485|ref|XP_002947308.1| hypothetical protein VOLCADRAFT_87560 [Volvox carteri f. nagariensis] gi|300267715|gb|EFJ51898.1| hypothetical protein VOLCADRAFT_87560 [Volvox carteri f. nagariensis] Length = 1951 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 9/92 (9%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +GK +L G GLNL +V D E V R + G R Sbjct: 1819 QGKPRVLLLQLKQGGAGLNLTE-AQHVVLVEPQLDPAA-----EAQAVGRVHRIGQCRPT 1872 Query: 166 FVYYLIAQNTIDELVLQRLRTK---STIQDLL 194 V+ + +T++E V + + + + Sbjct: 1873 HVHRFVVVHTVEEQVYKLATARARGMDLSSAV 1904 >gi|40253498|dbj|BAD05447.1| putative SNF2 domain/helicase domain-containing protein [Oryza sativa Japonica Group] gi|40253701|dbj|BAD05643.1| putative SNF2 domain/helicase domain-containing protein [Oryza sativa Japonica Group] Length = 769 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 7/94 (7%) Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N +LF + G G++L G + +V + + R + Sbjct: 636 QLAMDQFNGSADAKVLFGSIKAFGEGISL-VGASRIVILDVHLNPSVT-----RQAIGST 689 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G K+ VFVY L+A ++ +E + K I Sbjct: 690 FRPGQKKKVFVYRLVAADSPEEKAHETAFNKEVI 723 >gi|159479316|ref|XP_001697739.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158274107|gb|EDO99891.1| SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 876 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 49/180 (27%), Gaps = 42/180 (23%) Query: 24 NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR 83 + + + L+ +G H +EV + + L+ + L Sbjct: 609 EAKAFLTRLLERVSGPCKVLVFAHHQEVLNGLQEHLKQV---------------RVQLKV 653 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + + + ++VF L Sbjct: 654 MHMRIDGSTPAHERDKAVAAFQRLGPR---------------TPRVQVVVFVELDQSPSL 698 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQN-------TIDELVLQRLRTKSTIQDLLLN 196 R + G V VYYL+A+ T+DE + L K + ++ L+ Sbjct: 699 LV-----QAEDRAHRVGQAAHVHVYYLMAKGYTLRHAGTLDEQIWAMLERKRFVCEVDLD 753 >gi|118088342|ref|XP_419651.2| PREDICTED: similar to SNF2 histone linker PHD RING helicase [Gallus gallus] Length = 1681 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 49/148 (33%), Gaps = 14/148 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN 105 + ++ L+ I K A +V + L + KA I ++ Sbjct: 1504 GSHSTKVEAVVRTLKRIQFKDPGAKSLVFSTWQDVLDIIAKALYDNNMTFSQINGISKFQ 1563 Query: 106 --------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + KI +L + +GLN+ ++ + + R Sbjct: 1564 ENLSAFKYDPKINILLLPLHTGSNGLNI-IEATHVLLVEPILNPAHEL-----QAIGRVH 1617 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G ++ V+ + + TI+E + L+ Sbjct: 1618 RIGQTKSTIVHRFLIKATIEERMQTMLK 1645 >gi|213401273|ref|XP_002171409.1| E3 ubiquitin-protein ligase SHPRH [Schizosaccharomyces japonicus yFS275] gi|211999456|gb|EEB05116.1| E3 ubiquitin-protein ligase SHPRH [Schizosaccharomyces japonicus yFS275] Length = 1383 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 35/112 (31%), Gaps = 7/112 (6%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 R K +IQ++ +L H S GL L ++ Sbjct: 1238 HLSFRANDISFVKFDGRKRGKSIQDFVKNPTKQVLTLHAHSQSSGLTL-IAATHVILCEP 1296 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + ++R + G + VY + N+I+E +L+ K Sbjct: 1297 LLNPSLEL-----QAISRVHRIGQTKPTSVYVYVTDNSIEEEILRLSIQKRQ 1343 >gi|188994741|ref|YP_001928993.1| SNF2-related helicase [Porphyromonas gingivalis ATCC 33277] gi|188594421|dbj|BAG33396.1| SNF2-related helicase [Porphyromonas gingivalis ATCC 33277] Length = 965 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+ + + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 492 RAALVDEFRHRAT--IMIATEAAAEGINLQF-CSLVVNYDLPWNPQRIEQRIGRC----- 543 Query: 157 RQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V + + N D V + L K + D + A Sbjct: 544 HRYGQRHDVVVINFLNKSNAADRRVYELLDEKFRLFDGVFGA 585 >gi|224147596|ref|XP_002336506.1| hypothetical protein POPTRDRAFT_592433 [Populus trichocarpa] gi|222835795|gb|EEE74230.1| hypothetical protein POPTRDRAFT_592433 [Populus trichocarpa] Length = 387 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 7/98 (7%) Query: 97 DPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ +N + F +CG G++L G + ++ + + R + R Sbjct: 207 REWSMDRFNNSIDAKVFFGSIKACGEGISL-VGASRIIILDVHLNPSVT-----RQAIGR 260 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G + V+ Y L+A ++ +E K I + Sbjct: 261 AFRPGQTKKVYAYRLVAADSPEEEDHTTCFRKEAIAKM 298 >gi|323485276|ref|ZP_08090626.1| SNF2 family Superfamily II DNA/RNA helicase [Clostridium symbiosum WAL-14163] gi|323401454|gb|EGA93802.1| SNF2 family Superfamily II DNA/RNA helicase [Clostridium symbiosum WAL-14163] Length = 451 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 20/181 (11%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN 78 + NS +K + QL + H EK++ L ++E +I+ Y+F Sbjct: 284 ELVGDNSLTKMLYARQLCG------------QWHKEKLEGLRDLVESTED-RLIIFYNFT 330 Query: 79 SDLARLQKA----FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++L +QK ++ + +++ + F + G N Q N +++ Sbjct: 331 AELEAMQKKLADLNRPYSVVNGSKKDLTAYDQADDSITFIQYQAGAMGGNYQK-ANKVIY 389 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F+L R + G + F YYL+ + T++E L L+ + D L Sbjct: 390 FTLPLGKGSCDIWE--QSKKRIHRIGQAKPCFYYYLLVKGTVEEKNLAALKEGKELTDEL 447 Query: 195 L 195 Sbjct: 448 F 448 >gi|291524354|emb|CBK89941.1| DNA methylase [Eubacterium rectale DSM 17629] Length = 2929 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 2546 FIHEANTEVRKKELFSKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 2605 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + K ++ + Sbjct: 2606 RKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 2652 >gi|325982151|ref|YP_004294553.1| SNF2-like protein [Nitrosomonas sp. AL212] gi|325531670|gb|ADZ26391.1| SNF2-related protein [Nitrosomonas sp. AL212] Length = 951 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + E ++ A + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 487 RSALVDYFREEG-RIMIAT-EAGAEGINLQF-CSLVVNYDLPWNPQRIEQRIGRC----- 538 Query: 157 RQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + +N D+ V + L K + + + A Sbjct: 539 HRYGQKHDVVVVNFLNRKNAADKRVFELLAEKFKLFEGVFGA 580 >gi|313124725|ref|YP_004034984.1| hypothetical protein LDBND_1992 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281288|gb|ADQ62007.1| Hypothetical protein LDBND_1992 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 878 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 50/122 (40%), Gaps = 9/122 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + A+ GR+++ + + E + + GLNLQ+ N ++ + Sbjct: 464 YQAWQAKNYGNANYGRSVEYKHAIVDYFRENAK--ILICTDAGSEGLNLQF-CNTVINYD 520 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLL 195 L W+ + +Q I R + G + V L+ QN D+ V + L K + + + Sbjct: 521 LPWNPMKIEQRIGRC-----HRYGQQNDVVAINLLNTQNEADKRVYEILSEKFKLFESVF 575 Query: 196 NA 197 A Sbjct: 576 GA 577 >gi|302414736|ref|XP_003005200.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261356269|gb|EEY18697.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 381 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 56/142 (39%), Gaps = 8/142 (5%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG-KIPLL 112 E + ++I+ N + + + T + I +N K ++ Sbjct: 122 EHYEHEKIIVFYENENTAWYIASMLDVIQIEHLIYAKTLTQKRKAQYINTFNNNTKFRVI 181 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 +GL++ + + F + + + +E + R R+ ++AV V L+ Sbjct: 182 LMDITQAAYGLDM-RAASRIYFLNPVLNPQ-----VEAQAIGRARRISQQKAVSVETLVL 235 Query: 173 QNTIDELVLQRLRTKSTIQDLL 194 + +++E+++ R + K + + + Sbjct: 236 RGSLEEVIIMR-KHKMSQAEHI 256 >gi|291548670|emb|CBL24932.1| Superfamily II DNA/RNA helicases, SNF2 family [Ruminococcus torques L2-14] Length = 451 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 20/181 (11%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN 78 + NS +K + QL + H EK++ L ++E +I+ Y+F Sbjct: 284 ELVGDNSLTKMLYARQLCG------------QWHKEKLEGLRDLVESTED-RLIIFYNFT 330 Query: 79 SDLARLQKA----FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 ++L +QK ++ + +++ + F + G N Q N +++ Sbjct: 331 AELEAMQKKLADLNRPYSVVNGSKKDLTAYDQADDSITFIQYQAGAMGGNYQK-ANKIIY 389 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 F+L R + G + F YYL+ + T++E L L+ + D L Sbjct: 390 FTLPLGKGSCDMWE--QSKKRIHRIGQAKPCFYYYLLVKGTVEERNLAALKEGKELTDEL 447 Query: 195 L 195 Sbjct: 448 F 448 >gi|298286470|dbj|BAD92550.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 variant [Homo sapiens] Length = 1165 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/177 (12%), Positives = 51/177 (28%), Gaps = 37/177 (20%) Query: 3 QYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEKHWKEVH---- 52 Y Q + G + + ++ ++ N + + H Sbjct: 965 LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFT 1024 Query: 53 ------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ-------- 90 K + L+ I+ K A +++ S + ++ F Sbjct: 1025 GGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRL 1084 Query: 91 --GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + ++ +NE + + G GLNLQ + ++ F W+ + Sbjct: 1085 DGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQS-ADTVIIFDSDWNPHQ 1140 >gi|225388674|ref|ZP_03758398.1| hypothetical protein CLOSTASPAR_02410 [Clostridium asparagiforme DSM 15981] gi|225045272|gb|EEG55518.1| hypothetical protein CLOSTASPAR_02410 [Clostridium asparagiforme DSM 15981] Length = 657 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + G++ +L G G+++Q L W + + Sbjct: 272 FIHDADTDARKKELFSKVRSGQVRVLMGSTQKMGAGMDVQDRLVALHDLDCPWRPGDLEL 331 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + + T D + Q + K ++ + Sbjct: 332 RKGRIVR----QGNKNKKVHIYRYVTEGTFDSYLWQTVENKQKFISQIMTS 378 >gi|76156662|gb|AAX27825.2| SJCHGC07730 protein [Schistosoma japonicum] Length = 135 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 30/99 (30%), Gaps = 8/99 (8%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + I +N+ L + G+NL G N +V F Sbjct: 40 TRNVHYFRLDGSTNASEREKLINNFNDPKNPAKLFLMSTRAGCLGVNL-VGANRVVGFDA 98 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 W+ R + G + ++Y L + NT+ Sbjct: 99 SWNPCHDC-----QSRCRVYRYGQVKPCYIYRLGSDNTM 132 >gi|196250353|ref|ZP_03149046.1| helicase domain protein [Geobacillus sp. G11MC16] gi|196210242|gb|EDY05008.1| helicase domain protein [Geobacillus sp. G11MC16] Length = 1057 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 8/101 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G ++D+ ++++ + ++ A + G +NLQ+ N ++ + + W+ +Q + R Sbjct: 511 GFSMDQRRAEVEKFRN-HVQIMLAT-DAGGESINLQF-CNQMINYDIPWNPNRLEQRMGR 567 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 I + G K VFV+ L+A NT + VL RL K Sbjct: 568 I-----HRIGQKNEVFVFNLVAGNTREGDVLIRLLEKMEQM 603 >gi|291336801|gb|ADD96336.1| hypothetical protein [uncultured organism MedDCM-OCT-S08-C700] Length = 239 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 16/169 (9%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS 79 + A A K Q+ NG V + + I+ I + Y F + Sbjct: 46 VVADTGAKVMSKLKQIYNGHVITERHGAIIFDKSK-----AEYIKNNFKGKIAILYCFIA 100 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + L++ F D+ +N + SC G+NL G + L+F + + Sbjct: 101 EGKMLREYF-----GDRATDDPDVFNAVSGSVFIGQVKSCREGVNL-SGADHLIFMGIDY 154 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + Q ER + + V+Y+ A I+ V ++ K Sbjct: 155 SALSYLQGRERASFLGRDRKN-----KVHYIFADKGIELKVYDVVKLKE 198 >gi|229892402|gb|ACQ89838.1| helicase [Enterococcus faecalis] Length = 2727 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 4/114 (3%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + T + + G++ +L G G N+Q + W + Sbjct: 2356 QVRFIHEATTDAQKKELFAKVRSGEVRVLLGSTPKMGAGTNVQDRLIAIHNLDCPWRPSD 2415 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Q RI Q V VY + + T D + Q + +K ++ + Sbjct: 2416 LEQRQGRIER----QGNMFPEVEVYRYVTEQTFDAYLYQLVESKQKFISQIMTS 2465 >gi|21229999|ref|NP_635916.1| helicase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766875|ref|YP_241637.1| helicase [Xanthomonas campestris pv. campestris str. 8004] gi|188989950|ref|YP_001901960.1| putative DNA-binding protein [Xanthomonas campestris pv. campestris str. B100] gi|21111516|gb|AAM39840.1| helicase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572207|gb|AAY47617.1| helicase [Xanthomonas campestris pv. campestris str. 8004] gi|167731710|emb|CAP49888.1| putative DNA-binding protein [Xanthomonas campestris pv. campestris] Length = 967 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + + + + G G+NLQ+ ++LV + L W+ + +Q I RI Sbjct: 512 KAAVVEAFRDH--RDVLITTEAGGEGINLQF-CSLLVNYDLPWNPQRVEQRIGRI----- 563 Query: 157 RQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + +N D+LV + L K + D + A Sbjct: 564 HRYGQKSDVVVVNFVNRKNRADQLVFELLEKKFKLFDGVFGA 605 >gi|302416787|ref|XP_003006225.1| E3 ubiquitin-protein ligase SHPRH [Verticillium albo-atrum VaMs.102] gi|261355641|gb|EEY18069.1| E3 ubiquitin-protein ligase SHPRH [Verticillium albo-atrum VaMs.102] Length = 1401 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 14/166 (8%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK---A 87 K Q+ + E D ++ L + E A IV + L + Sbjct: 1144 KLAQIRD---VDLEGPPLTTKVDSVVRHLLWLRESDPGAKSIVFSQYRDFLQVIGSALSR 1200 Query: 88 FPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T P +Q + + + H + GLNL + + + Sbjct: 1201 SRIGYTSIDKPNGVQRFKEDAGLECFLLHGRAQSSGLNLVN-ASHVFLCEPLLNTA---- 1255 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 IE + R + G + V+ + + T++E + L K +Q Sbjct: 1256 -IELQAIARVDRIGQQHETTVWLYLIEGTVEESIYN-LSVKRRLQH 1299 >gi|308803538|ref|XP_003079082.1| Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily (ISS) [Ostreococcus tauri] gi|116057536|emb|CAL51963.1| Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily (ISS) [Ostreococcus tauri] Length = 2061 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 6/172 (3%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 + A + ++ + +G V K V K + I P ++ Sbjct: 1880 DSSVVTAVSLGTEVGAKAGMTDGGVGVHGSKIIDLVKHIKSVPDDERILVFVQFPDLMLQ 1939 Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGG 129 N+ K ++ + + E+ + + LL G NL Sbjct: 1940 VSNALNEAGIKTLKLKGSVHQQTGALDEFQKENLKKDDARVLLLLSRDESASGANLTTAN 1999 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 + + L + + E + R R+ G +R V ++ IA+++ID +L Sbjct: 2000 HAIFVHPLLTNSAQEYIASETQAIGRIRRYGQQREVRIWRFIARDSIDSEIL 2051 >gi|297810883|ref|XP_002873325.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297319162|gb|EFH49584.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1194 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 45/161 (27%), Gaps = 8/161 (4%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 + + +++ + ++ + + F D Sbjct: 540 HPLLSGLDYTPEDIDGDTSSTKM-VVFAHHHKVLDGIQEFMCDKGIGFVRIDGMTLPRDR 598 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +Q + ++ + + G GL+ +VF L R Sbjct: 599 QLAVQSFQFSSEVKVAIIGVEAGGVGLDF-SAAQNVVFLELPKTPSLLL-----QAEDRA 652 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G AV VY A++T+DE Q L K + Sbjct: 653 HRRGQTSAVNVYIFCAKDTMDESNWQNLNKKLHRISSTTDG 693 >gi|160894868|ref|ZP_02075642.1| hypothetical protein CLOL250_02418 [Clostridium sp. L2-50] gi|156863299|gb|EDO56730.1| hypothetical protein CLOL250_02418 [Clostridium sp. L2-50] Length = 862 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 9/122 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + AR + R ++ ++ + + +L S GLNLQ+ N ++ + Sbjct: 453 YKAWKARNYGKYVGSRNVELKNAIVEAFRDEY-KILLVT-DSGSEGLNLQF-CNTIINYD 509 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLL 195 L W+ ++ +Q I R + G K V V L+ QN D+ V + L K + + Sbjct: 510 LPWNPQKIEQRIGRC-----HRYGQKNDVVVINLLNTQNVADKRVYEILSEKFELFQGVF 564 Query: 196 NA 197 A Sbjct: 565 GA 566 >gi|108759757|ref|YP_629003.1| putative RNA polymerase-associated protein RapA [Myxococcus xanthus DK 1622] gi|108463637|gb|ABF88822.1| putative RNA polymerase-associated protein RapA [Myxococcus xanthus DK 1622] Length = 1022 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 13/125 (10%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + L + + + + + P + G G N Q+ + LV + L W +Q Sbjct: 546 YHGDLPLVERDRQVARFRDPEGPKVLLCTEVGGEGRNFQF-AHHLVHYDLPWSPATVEQR 604 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ-------DLLLNALKK 200 I R+ + G V ++ T+ VL L + D +L ++ Sbjct: 605 IGRLD-----RIGQTHPVEIHVFDPAGTLASDVLMLLADAVGVFGETVGGLDAVLEEVEA 659 Query: 201 ETIHV 205 + Sbjct: 660 RLAEL 664 >gi|58803049|gb|AAW82648.1| ATP-dependent RNA helicase [Myxococcus xanthus DK 1622] Length = 1017 Score = 54.0 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 13/125 (10%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + L + + + + + P + G G N Q+ + LV + L W +Q Sbjct: 541 YHGDLPLVERDRQVARFRDPEGPKVLLCTEVGGEGRNFQF-AHHLVHYDLPWSPATVEQR 599 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ-------DLLLNALKK 200 I R+ + G V ++ T+ VL L + D +L ++ Sbjct: 600 IGRLD-----RIGQTHPVEIHVFDPAGTLASDVLMLLADAVGVFGETVGGLDAVLEEVEA 654 Query: 201 ETIHV 205 + Sbjct: 655 RLAEL 659 >gi|322689353|ref|YP_004209087.1| hypothetical protein BLIF_1168 [Bifidobacterium longum subsp. infantis 157F] gi|320460689|dbj|BAJ71309.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 2148 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 4/115 (3%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 ++ G + + G+I +L G G N+Q + W Sbjct: 1418 QIAFVHDAGDNPARREQLFAKVRSGEIRVLMGSTQKLGTGTNVQERLAAIHDLDCPWRPA 1477 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +Q + RI QRQ V Y + + T D Q + K L+++ Sbjct: 1478 DLEQRLGRI----QRQGNTYDHVRDYRYVTKGTFDAYSYQTVERKQRFISQLMSS 1528 >gi|148656660|ref|YP_001276865.1| helicase domain-containing protein [Roseiflexus sp. RS-1] gi|148568770|gb|ABQ90915.1| helicase domain protein [Roseiflexus sp. RS-1] Length = 969 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 49/161 (30%), Gaps = 21/161 (13%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTL-------------DK 96 HD K++ + I+ + + + + ++ Sbjct: 462 HDAKLRRAVELTRHLIDEGFHPILWCRYVATAEYVADQVQRDLPDGVQVACVTGRMGDEE 521 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E + + +L A G+NLQ +V + L W+ +Q R+ Q Sbjct: 522 RQARIAELDADRPRVLVAT-DCLSEGVNLQSLFTAVVHYDLPWNPNRLEQREGRVDRYGQ 580 Query: 157 RQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLLN 196 V V ++ +D VL L K+ L Sbjct: 581 PAPR----VRVIRFFGRDNPVDGAVLDVLLNKARTIHRTLG 617 >gi|77164070|ref|YP_342595.1| helicase-like [Nitrosococcus oceani ATCC 19707] gi|254435267|ref|ZP_05048774.1| Helicase conserved C-terminal domain protein [Nitrosococcus oceani AFC27] gi|76882384|gb|ABA57065.1| Helicase-like protein [Nitrosococcus oceani ATCC 19707] gi|207088378|gb|EDZ65650.1| Helicase conserved C-terminal domain protein [Nitrosococcus oceani AFC27] Length = 910 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 10/124 (8%) Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + + E ++ L+ A + GLNLQ G ++ L W+ Sbjct: 736 RLYHGGETVQMEREPLKRLVAEREVRLMVAT-DAACEGLNLQMLGTLIN-VDLPWNPTRL 793 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS----TIQDLLLNALKK 200 +Q + RI Q + V + L+ Q T+DE + +RL + + L + LK Sbjct: 794 EQRLGRIKRLGQLR----ENVDMLNLVYQGTVDETIYERLSERMRDRYDLFGALPDTLKD 849 Query: 201 ETIH 204 E I Sbjct: 850 EWIE 853 >gi|297821869|ref|XP_002878817.1| hypothetical protein ARALYDRAFT_344097 [Arabidopsis lyrata subsp. lyrata] gi|297324656|gb|EFH55076.1| hypothetical protein ARALYDRAFT_344097 [Arabidopsis lyrata subsp. lyrata] Length = 786 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 54/190 (28%), Gaps = 23/190 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + E+ ++ + N VK N + + + ++ ++ Sbjct: 548 DEM-DEIIKEIDVTDGVKTNFFMGLVKLCDYTNEKILVVSQYVIPLIFLQR------LVA 600 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 K D ++ Q N + F +C + Sbjct: 601 KIKGWK---------DGKETFMIKGDTSLSAREMSINQFNNSNDAKIFFVSIKACNEQIG 651 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L G ++ + + + R + G + V+ Y L+A +T +E + + Sbjct: 652 LT-GATRVLMLDIIANP-----CMARQAIELAYHPGQQNKVYSYRLVAADTSEED-EEII 704 Query: 185 RTKSTIQDLL 194 K I + Sbjct: 705 AAKKEIISGI 714 >gi|295099470|emb|CBK88559.1| DNA methylase [Eubacterium cylindroides T2-87] Length = 2929 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 2546 FIHEANTEVRKKELFSKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 2605 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + K ++ + Sbjct: 2606 RKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 2652 >gi|320009544|gb|ADW04394.1| SNF2-related protein [Streptomyces flavogriseus ATCC 33331] Length = 606 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 3/98 (3%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +L ++PA+ G G++L + V+ + Q ++RI Sbjct: 482 DPDCSVLISNPATLGEGISLHQVCHDAVYVDRDFQAGRFLQSLDRIHRLG---LAPDTET 538 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 V L A ++D++V RL K +L+ + + + Sbjct: 539 RVTVLTAMGSVDDVVSMRLAEKLEFMGSILDDPEVQQL 576 >gi|145610845|ref|XP_368376.2| hypothetical protein MGG_00868 [Magnaporthe oryzae 70-15] gi|145018188|gb|EDK02467.1| hypothetical protein MGG_00868 [Magnaporthe oryzae 70-15] Length = 861 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 94 LDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I+ + + ++F G GLNLQ N+++ ++WW Q E Sbjct: 747 PVERERVIRNFTDATGPRVMFVSRGVGGQGLNLQA-ANVVIQCNVWWK-----QSWEEHA 800 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G R VFVY + A+ +D +R K+ +++ + +E I Sbjct: 801 WGRVHRPGQTRPVFVYQIEARCQVDAYKKERRDAKNETNSMIMERITREDID 852 >gi|119714054|ref|YP_919196.1| helicase domain-containing protein [Nocardioides sp. JS614] gi|119525963|gb|ABL79333.1| helicase domain protein [Nocardioides sp. JS614] Length = 1925 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 6/110 (5%) Query: 88 FPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + G + +L G G N+Q L W + Sbjct: 1514 RFMHEANNDRAKARLFEQARTGHVSVLIGSTEKMGVGTNVQRRAVALHHVDCPWRPADLA 1573 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q RI Q +V VY + +++ D + Q + K+ + L+ Sbjct: 1574 QRDGRIMR----QGNLNESVQVYRYVTESSFDTYLWQTVERKAKFINQLM 1619 >gi|126337900|ref|XP_001367889.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Monodelphis domestica] Length = 965 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 9/100 (9%) Query: 93 TLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGG-NILVFFSLWWDLEEHQQMIER 150 + Q++ K + + + L + +++VF L+W+ Sbjct: 777 SSSDRQTLCQQFQLSEKCAVAVLSITAAN--MGLTFSATDLVVFAELFWNPGVLI----- 829 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 830 QAEDRVHRIGQTSSVTIHYLVARGTADDYLWPLIQEKIKV 869 >gi|224107415|ref|XP_002314473.1| hypothetical protein POPTRDRAFT_229741 [Populus trichocarpa] gi|222863513|gb|EEF00644.1| hypothetical protein POPTRDRAFT_229741 [Populus trichocarpa] Length = 127 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 20/131 (15%) Query: 54 EKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTI 101 K++ L+ ++ K ++ L +++ + I Sbjct: 1 GKLEMLDRLLPKLKATDHRVLFFSTMTRLLDVMEEYLTWKQYRYLRLDGHTSGGDRGSLI 60 Query: 102 QEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 +N + + + G G+NLQ + ++ F W+ + ++ R + Sbjct: 61 DRFNQQDSPYFIFLLSIRAGGVGVNLQA-ADTVIIFDTDWNPQ-----VDLQAQARAHRI 114 Query: 160 GFKRAVFVYYL 170 G KR V V Sbjct: 115 GQKRDVLVLRF 125 >gi|56475781|ref|YP_157370.1| SNF2 family helicase [Aromatoleum aromaticum EbN1] gi|56311824|emb|CAI06469.1| helicase (Snf2 family) [Aromatoleum aromaticum EbN1] Length = 965 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 9/108 (8%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +D+ I + E + + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 489 SPAVDRRTALIDYFREHA--EILIATEAAAEGVNLQF-CSLVVNYDLPWNPQRVEQRIGR 545 Query: 151 IGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V + +N D VL+ L+ K + D + A Sbjct: 546 C-----HRYGQRFDVVVINFLNQRNEADRRVLELLQDKFRLFDGVFGA 588 >gi|46139439|ref|XP_391410.1| hypothetical protein FG11234.1 [Gibberella zeae PH-1] Length = 909 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 32/105 (30%), Gaps = 23/105 (21%) Query: 93 TLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + N+ + ++ + G +E Sbjct: 806 PQRSRQKVVDNFRNDLSVRVMLLTLSCGAAGN----------------------PTLEEQ 843 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + V +N+ + V++R +K + LLL+ Sbjct: 844 ALARIHRIGQTQEVTTVRFFMRNSFEHQVIKRQESKKYLAGLLLS 888 >gi|12043930|gb|AAG47648.1| HepA-related protein HARP [Mus musculus] Length = 900 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 11/142 (7%) Query: 54 EKIKALEVI---IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--PCTIQEWNEGK 108 KI + + + +V H L + K + + Sbjct: 666 AKIPCVVEYILDLLDSGREKFLVFAHHKVILDAVAKELERKNVQHIRIDGSCQRFQLSKG 725 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + GL +++VF L+W+ R + G +V ++ Sbjct: 726 HTVALLSITAANMGLTF-STADLVVFAELFWNPGVLI-----QAEDRVHRIGQTNSVSIH 779 Query: 169 YLIAQNTIDELVLQRLRTKSTI 190 YL+A+ T D+ + ++ K + Sbjct: 780 YLVAKGTADDYLWPLIQEKIKV 801 >gi|116072526|ref|ZP_01469793.1| putative DEAD/H helicase [Synechococcus sp. BL107] gi|116065048|gb|EAU70807.1| putative DEAD/H helicase [Synechococcus sp. BL107] Length = 1076 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 6/103 (5%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 T + + EG +L + GLN Q+ G ++ + + W+ +Q I RI Q Sbjct: 817 REATKRGFKEGNAEILLCT-DAAAEGLNFQFCGALIN-YDMPWNPMRVEQRIGRIDRIGQ 874 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + L T++ V + L+ + + + ++ L+ Sbjct: 875 THEQM----QIVNLHLDGTVEADVYRALKGRIAMFEQVVGKLQ 913 >gi|225448562|ref|XP_002273775.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1306 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 95 DKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + ++ E G +L A +C G++L + ++ W+ + + Sbjct: 1109 FERGRVMDQFEEPGGASKVLLASITACAEGISLTA-ASRVILLDTEWNPSKQ-----KQA 1162 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V R + G +R V+VY L+ +T++E R K + ++ + Sbjct: 1163 VARAFRPGQERVVYVYQLLETDTLEEEKNSRTNWKEWVSSMIFSE 1207 >gi|320104893|ref|YP_004180484.1| helicase domain-containing protein [Isosphaera pallida ATCC 43644] gi|319752175|gb|ADV63935.1| helicase domain protein [Isosphaera pallida ATCC 43644] Length = 1166 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 69/191 (36%), Gaps = 24/191 (12%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ--- 85 K Q A V +++ W E+ ++ E II+ L L Sbjct: 460 LTKLEQQARAVVTSGQDRKWDELSKLLQNNPQMHDESGRQRKIIIFSEHRDTLNYLHAKI 519 Query: 86 ---------KAFPQGRTLDKDPCTIQ--EWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 G D IQ ++ ++ +L A A+ G+NLQ +++V Sbjct: 520 AGVLGNANAIVTIHGGINRDDRLRIQALFRSDPEVRVLVATDAAG-EGVNLQ-CAHLMVN 577 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + L W+ +Q RI + G ++ L+A+ T + V RL K + Sbjct: 578 YDLPWNPNRLEQRFGRI-----HRIGQTEVCHLWSLVAKETREGAVWYRLLEKIATEC-- 630 Query: 195 LNALKKETIHV 205 ALK + ++ Sbjct: 631 -EALKGKVFNI 640 >gi|288870537|ref|ZP_06114461.2| superfamily II DNA and RNA helicase [Clostridium hathewayi DSM 13479] gi|288866818|gb|EFC99116.1| superfamily II DNA and RNA helicase [Clostridium hathewayi DSM 13479] Length = 1435 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 53/178 (29%), Gaps = 15/178 (8%) Query: 31 KCLQLA----NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY-------HFNS 79 K QL + +K K++ + + LE I P Y Sbjct: 985 KLTQLVFCDISTPQAAPYKKAAKQLDNPLLHGLEEAIPLDEPEPAFTIYEDIRQKLIAQG 1044 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 A + T + + G++ +L A G G N+Q L W Sbjct: 1045 MPADQIAFIHEANTEVRKKELFSKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPW 1104 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q RI Q V VY + + T D + Q + K ++ + Sbjct: 1105 RPGDLAQRKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 1158 >gi|319938578|ref|ZP_08012968.1| superfamily II DNA and RNA helicase [Coprobacillus sp. 29_1] gi|319806250|gb|EFW02933.1| superfamily II DNA and RNA helicase [Coprobacillus sp. 29_1] Length = 968 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 33/111 (29%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + G++ +L G G N Q L W + Q Sbjct: 602 FIHDANTDARKQELFNKVRRGQVRVLIGSTQKMGAGTNCQDRLIALHDLDCPWRPSDLIQ 661 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y + + T D + Q + K ++ + Sbjct: 662 RSGRIIR----QGNKNPEVDIYRYVTEGTFDAYLYQLVENKQRFISQIMTS 708 >gi|311977748|ref|YP_003986868.1| putative ATP-dependent RNA helicase [Acanthamoeba polyphaga mimivirus] gi|82050866|sp|Q5UR22|YL364_MIMIV RecName: Full=Putative ATP-dependent RNA helicase L364 gi|55416983|gb|AAV50633.1| SW1/SNF2 helicase (MSV224) [Acanthamoeba polyphaga mimivirus] gi|308204359|gb|ADO18160.1| putative ATP-dependent RNA helicase [Acanthamoeba polyphaga mimivirus] Length = 536 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 65/203 (32%), Gaps = 29/203 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + EL +L+ + + N +K K Q E+ I + Sbjct: 297 EAYEEI-AELMRELEEKKTQCKNHLAKIQKLKQ-------------EIELRKIPIFIEQT 342 Query: 62 IIEKANAAPIIVAYHFNSDLAR------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 + +I+ ++ + + ++ +T D+ +I + ++ Sbjct: 343 QLYLEQGKSVIIFVNYINTMNILSAQLNIKCRICGDQTQDQRQESIALFQANIEKIIICQ 402 Query: 116 PASCGHG---LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G G +L G + + + + R ++G K V ++ Sbjct: 403 IRAGGVGISLHDLHGGHPRVTLLNFPDSASDLL-----QALGRAPRSGAKSPVLQRIILV 457 Query: 173 QN-TIDELVLQRLRTKSTIQDLL 194 N ++ +++ + K + Sbjct: 458 ANVEYEKNIMRSINKKLANISAI 480 >gi|114583214|ref|XP_001153069.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 isoform 4 [Pan troglodytes] Length = 932 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 57/162 (35%), Gaps = 19/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-------NSDLARLQKAFPQ-- 90 + + ++ I+ + ++ ++ +V H +L R + Sbjct: 677 ILFFNRTAEAKIPS-VIEYILDLL-ESGREKFLVFAHHKVVLDAITQELERKHVQHIRID 734 Query: 91 -GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + Q++ + + + GL +++VF L+W+ Sbjct: 735 GSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLI--- 790 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 791 --QAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 830 >gi|6693791|gb|AAF24984.1|AF082179_1 HepA-related protein HARP [Homo sapiens] Length = 954 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 57/162 (35%), Gaps = 19/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-------NSDLARLQKAFPQ-- 90 + + ++ I+ + ++ ++ +V H +L R + Sbjct: 699 ILFFNRTAEAKIPS-VIEYILDLL-ESGREKFLVFAHHKVVLDAITQELERKHVQHIRID 756 Query: 91 -GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + Q++ + + + GL +++VF L+W+ Sbjct: 757 GSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLI--- 812 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 813 --QAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 852 >gi|16741295|gb|AAH16482.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Homo sapiens] gi|123981668|gb|ABM82663.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [synthetic construct] gi|123996475|gb|ABM85839.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [synthetic construct] Length = 954 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 57/162 (35%), Gaps = 19/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-------NSDLARLQKAFPQ-- 90 + + ++ I+ + ++ ++ +V H +L R + Sbjct: 699 ILFFNRTAEAKIPS-VIEYILDLL-ESGREKFLVFAHHKVVLDAITQELERKHVQHIRID 756 Query: 91 -GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + Q++ + + + GL +++VF L+W+ Sbjct: 757 GSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLI--- 812 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 813 --QAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 852 >gi|21071060|ref|NP_054859.2| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Homo sapiens] gi|187761314|ref|NP_001120679.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Homo sapiens] gi|60390962|sp|Q9NZC9|SMAL1_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; Short=hHARP; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|18463933|gb|AAL73034.1|AF432223_1 SMARCAL1 [Homo sapiens] gi|7861961|gb|AAF70454.1| HARP [Homo sapiens] gi|27696616|gb|AAH43341.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Homo sapiens] gi|62702171|gb|AAX93097.1| unknown [Homo sapiens] gi|119590973|gb|EAW70567.1| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Homo sapiens] Length = 954 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 57/162 (35%), Gaps = 19/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-------NSDLARLQKAFPQ-- 90 + + ++ I+ + ++ ++ +V H +L R + Sbjct: 699 ILFFNRTAEAKIPS-VIEYILDLL-ESGREKFLVFAHHKVVLDAITQELERKHVQHIRID 756 Query: 91 -GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + Q++ + + + GL +++VF L+W+ Sbjct: 757 GSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLI--- 812 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 813 --QAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 852 >gi|121582883|ref|YP_973325.1| helicase, C-terminal [Polaromonas naphthalenivorans CJ2] gi|120596145|gb|ABM39583.1| helicase, C-terminal [Polaromonas naphthalenivorans CJ2] Length = 1649 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 5/119 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + ++ G+I +L G G N+Q W + +Q Sbjct: 1281 FAQDYKTTAQKGELHRKVRSGRIRILQGSTELMGFGTNVQDRLVAEHHLDAPWRPRDVEQ 1340 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RI Q VF+Y + ++T D + Q L K+ ++ K E V Sbjct: 1341 RDGRIIR----QGNLNEEVFIYRYVTESTFDAYMWQTLERKAGFIAQVMEG-KTEMRSV 1394 >gi|322693650|gb|EFY85503.1| SNF2 family helicase/ATPase, putative [Metarhizium acridum CQMa 102] Length = 1355 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 48/149 (32%), Gaps = 10/149 (6%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ- 102 + + D ++ L + E A IV + L L+ AF + R + Sbjct: 1116 DGPSFTTKVDTLVRHLLWLRESDPGAKSIVFSQYRDFLHILRNAFRRFRIGHASIDDVNG 1175 Query: 103 ---EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + + H + GLNL + + + Q I R+ + Sbjct: 1176 IASFKEDPAVEVFLLHARAHSSGLNLVN-ASHVFLCEPLLNTALELQAIARVD-----RI 1229 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 G + V+ + T++E + + Sbjct: 1230 GQQHETTVWLYLVSGTVEESIYNLSVQRR 1258 >gi|218473432|emb|CAV31142.1| hypothetical protein [Streptococcus pneumoniae] Length = 1315 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 4/91 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +K ++ N G++ +L A G GLN+Q + + W + QQ Sbjct: 1226 FVHDANSDEKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQ 1285 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 RI Q + V +Y+ I + + D Sbjct: 1286 RNGRIIR----QGNENKEVDIYHYITKGSFD 1312 >gi|326524448|dbj|BAK00607.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 77 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 5/63 (7%) Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 WW+ +E R + G + + + ++T++E +LQ K + D Sbjct: 1 MDPWWNPA-----VESQAQDRIHRIGQFKPIRSTRFVIKDTVEERILQLQEKKQLVFDGT 55 Query: 195 LNA 197 + Sbjct: 56 VGD 58 >gi|310796548|gb|EFQ32009.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 968 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 47/164 (28%), Gaps = 21/164 (12%) Query: 49 KEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRTLD--------- 95 K+ + II E+A II+ F + Sbjct: 767 VPCPGTKLTVAKEIILQWQEEAPNDKIIIFVEFIKTAVLMGIMLNLEDIPFVYLNGKLTS 826 Query: 96 --KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K ++ +L A G LNL N ++ WW+ + Sbjct: 827 TEKLKAVDTFKTNPEVKILIASMKVGGQALNLT-CANRVIQVDSWWN-----EAAGEQAN 880 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + + + T+D+ + +K+ + +L Sbjct: 881 GRVNRMGQLKPSHAVVIKVRGTVDDYITDLQDSKTKDIEHVLQD 924 >gi|212543375|ref|XP_002151842.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] gi|210066749|gb|EEA20842.1| SNF2 family helicase/ATPase, putative [Penicillium marneffei ATCC 18224] Length = 1479 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK---AFPQGRTLDKDPCTIQEW-NEGKIPLL 112 + L + E A IV + L L F G + + IQ + + Sbjct: 1238 RHLMWLREHDPGAKSIVFSQYRDFLGVLATAFSRFKIGYSSVEAKDGIQRFKEDPAAECF 1297 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G R V+ + Sbjct: 1298 LLHARAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRPTTVWMYLV 1351 Query: 173 QNTIDELVLQR 183 +T++E + Q Sbjct: 1352 SDTVEESIYQI 1362 >gi|114583208|ref|XP_516076.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 isoform 6 [Pan troglodytes] gi|114583210|ref|XP_001153008.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 isoform 3 [Pan troglodytes] gi|114583212|ref|XP_001153124.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 isoform 5 [Pan troglodytes] Length = 954 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 57/162 (35%), Gaps = 19/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-------NSDLARLQKAFPQ-- 90 + + ++ I+ + ++ ++ +V H +L R + Sbjct: 699 ILFFNRTAEAKIPS-VIEYILDLL-ESGREKFLVFAHHKVVLDAITQELERKHVQHIRID 756 Query: 91 -GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + Q++ + + + GL +++VF L+W+ Sbjct: 757 GSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLI--- 812 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 813 --QAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 852 >gi|6102878|emb|CAB59251.1| hypothetical protein [Homo sapiens] Length = 808 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 57/162 (35%), Gaps = 19/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-------NSDLARLQKAFPQ-- 90 + + ++ I+ + ++ ++ +V H +L R + Sbjct: 553 ILFFNRTAEAKIPS-VIEYILDLL-ESGREKFLVFAHHKVVLDAITQELERKHVQHIRID 610 Query: 91 -GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + Q++ + + + GL +++VF L+W+ Sbjct: 611 GSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLI--- 666 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 667 --QAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 706 >gi|284053397|ref|ZP_06383607.1| helicase domain protein [Arthrospira platensis str. Paraca] Length = 759 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 59/170 (34%), Gaps = 10/170 (5%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ--KAF 88 + Q+ G + + + K VI + + + L R + Sbjct: 202 QLSQVIEGEFFTPKPHNSDGEIAPKTLPKLVIFTEHRDTLNYLRDRIRTLLGRPEAVVTI 261 Query: 89 PQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G ++ + + + I +L A A+ G+NLQ ++V + L W+ +Q Sbjct: 262 HGGMGREERKKAEEAFKQDVNIQVLVATDAAG-EGINLQR-AYLMVNYDLPWNPNRLEQR 319 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A T + V L K I+ L Sbjct: 320 FGRI-----HRIGQTEVCHLWNLVAGETREGDVYLSLLRKLEIEQKALGG 364 >gi|34393589|dbj|BAC83216.1| putative DNA helicase [Oryza sativa Japonica Group] Length = 1029 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 11/168 (6%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-FNSDLARLQKAFPQGRTLDKD 97 E + + + I A+ ++ F ++ + + Sbjct: 377 HFIMKEPADNGSLDSQ--SNCQKTIIFAHHLKVLDGVQVFVTEQRIKYVRIDGSTSPRER 434 Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + ++ + + G GL+ +VF L E R Sbjct: 435 KDAVDSFRLNPEVMVAIIGITAGGVGLDF-SSAQNVVFVELPKSASELL-----QAEDRA 488 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + G AV +Y A+NT+DE L L+N KK+ I Sbjct: 489 HRRGQTNAVNIYIFCARNTLDESHWLHLNQSLFRVSSLMNG-KKDAIR 535 >gi|302501520|ref|XP_003012752.1| hypothetical protein ARB_01003 [Arthroderma benhamiae CBS 112371] gi|291176312|gb|EFE32112.1| hypothetical protein ARB_01003 [Arthroderma benhamiae CBS 112371] Length = 333 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLL 112 + L + + A IV F L+ + F G + DP I+ + + Sbjct: 64 RHLLWLRQHDPGAKSIVFSQNKSFLVTLSHVFYWFKIGHSSIDDPSGIERFKEDHTTECF 123 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G + V+ + Sbjct: 124 LLHAKAHASGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHQDTTVWMYLV 177 Query: 173 QNTIDELVLQR 183 NT++E + Q Sbjct: 178 ANTVEESIYQI 188 >gi|324510004|gb|ADY44188.1| Chromodomain-helicase-DNA-binding protein 1-like protein [Ascaris suum] Length = 456 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 49/183 (26%), Gaps = 27/183 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE-------KHWKEVHDE 54 K Y + + + + + A +D Sbjct: 264 KNYRFLSAAGCAQGDHQGGSRNSLVNIMTQLRKCALHPYLFDGMEPEPFKEGEHLATSSG 323 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC----------TIQ 102 K+ LE I+ + + +++ L +Q F R + I Sbjct: 324 KMMLLERILGFLRKHKHRVLLFSQMTRMLDIVQDYFNYRRWSFERLDGKLKADMRFTAID 383 Query: 103 EWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + + + G GL L G + ++F ++ + + R + G Sbjct: 384 NFQKSDSDVFCFLLSTRAGGLGLTLT-GADTVIFIDSDFNPQN-----DIQAAARCHRIG 437 Query: 161 FKR 163 + Sbjct: 438 QTK 440 >gi|331090153|ref|ZP_08339041.1| hypothetical protein HMPREF1025_02624 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402099|gb|EGG81671.1| hypothetical protein HMPREF1025_02624 [Lachnospiraceae bacterium 3_1_46FAA] Length = 872 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 9/122 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + + GR+++ + + + + GLNLQ+ N ++ + Sbjct: 459 YKAWQVKNFGKANYGRSVEYKHAIVDYFRHNAK--ILICTDAGSEGLNLQF-CNTVINYD 515 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLL 195 L W+ + +Q I R + G V L+ QN D+ V L K + + + Sbjct: 516 LPWNPMKIEQRIGRC-----HRYGQDHDVVAINLLNTQNAADQRVYDILSKKFELFEGVF 570 Query: 196 NA 197 A Sbjct: 571 GA 572 >gi|317496497|ref|ZP_07954846.1| hypothetical protein HMPREF0432_01450 [Gemella moribillum M424] gi|316913300|gb|EFV34797.1| hypothetical protein HMPREF0432_01450 [Gemella moribillum M424] Length = 1714 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G + +L G G N+Q L + W + +Q Sbjct: 1162 FIHEANSDKRKDELFAKVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 1221 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y I +NT D + Q + K ++ + Sbjct: 1222 RAGRIVR----QGNENKEVNIYRYITENTFDAYLWQTIENKQKFISQIMTS 1268 >gi|217978103|ref|YP_002362250.1| helicase domain protein [Methylocella silvestris BL2] gi|217503479|gb|ACK50888.1| helicase domain protein [Methylocella silvestris BL2] Length = 949 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 11/124 (8%) Query: 77 FNSDLARLQ--KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + + + R + RT D + + E + + G+NLQ+ +++V Sbjct: 467 YKAWIERHKGTDRVTGSRTADIRAALVDYFREKAG--IMIATEAAAEGINLQF-CSMVVN 523 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDL 193 F L W+ + +Q I R + G + V V + +N D+ V + L K + Sbjct: 524 FDLPWNPQRIEQRIGRC-----HRYGQRYDVVVVNFLNKNNAADQRVYELLAEKFKLFSG 578 Query: 194 LLNA 197 + A Sbjct: 579 VFGA 582 >gi|302660947|ref|XP_003022147.1| hypothetical protein TRV_03750 [Trichophyton verrucosum HKI 0517] gi|291186078|gb|EFE41529.1| hypothetical protein TRV_03750 [Trichophyton verrucosum HKI 0517] Length = 333 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLL 112 + L + + A IV F L+ + F G + DP I+ + + Sbjct: 64 RHLLWLRQHDPGAKSIVFSQNKSFLVTLSHVFYWFKIGHSSIDDPSGIERFKEDHTTECF 123 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G + V+ + Sbjct: 124 LLHAKAHASGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHQDTTVWMYLV 177 Query: 173 QNTIDELVLQR 183 NT++E + Q Sbjct: 178 ANTVEESIYQI 188 >gi|256251590|emb|CAR63698.1| putative SNF2 family N-terminal domain containing protein [Angiostrongylus cantonensis] Length = 284 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 23/41 (56%) Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V++Y IAQ T++E + +R TK + +++ Sbjct: 1 YRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVDE 41 >gi|218134948|ref|ZP_03463752.1| hypothetical protein BACPEC_02853 [Bacteroides pectinophilus ATCC 43243] gi|217990333|gb|EEC56344.1| hypothetical protein BACPEC_02853 [Bacteroides pectinophilus ATCC 43243] Length = 403 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 9/122 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + AR + R ++ ++ + + +L S GLNLQ+ N ++ + Sbjct: 66 YKAWKARNYGKYVGSRNVELKNAIVEAFRDEY-KILLVT-DSGSEGLNLQF-CNTIINYD 122 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLL 195 L W+ ++ +Q I R + G K V V L+ QN D+ V + L K + + Sbjct: 123 LPWNPQKIEQRIGRC-----HRYGQKNDVVVINLLNTQNVADKRVYEILSEKFELFQGVF 177 Query: 196 NA 197 A Sbjct: 178 GA 179 >gi|210610976|ref|ZP_03288685.1| hypothetical protein CLONEX_00875 [Clostridium nexile DSM 1787] gi|210152201|gb|EEA83208.1| hypothetical protein CLONEX_00875 [Clostridium nexile DSM 1787] Length = 862 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 9/122 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + AR + R ++ ++ + + +L S GLNLQ+ N ++ + Sbjct: 453 YKAWKARNYGKYVGSRNVELKNAIVEAFRDEY-KILLVT-DSGSEGLNLQF-CNTIINYD 509 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLL 195 L W+ ++ +Q I R + G K V V L+ QN D+ V + L K + + Sbjct: 510 LPWNPQKIEQRIGRC-----HRYGQKNDVVVINLLNTQNVADKRVYEILSEKFELFQGVF 564 Query: 196 NA 197 A Sbjct: 565 GA 566 >gi|309702945|emb|CBJ02276.1| putative phage protein [Escherichia coli ETEC H10407] Length = 286 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 23/46 (50%), Positives = 36/46 (78%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKH 47 +QY + ++E++ +L GE IEA N+A+KT+KCLQ+A+GAVY D+ Sbjct: 241 QQYREMEKEMFLELNGEGIEAPNAAAKTLKCLQIASGAVYTDDTGS 286 >gi|310658941|ref|YP_003936662.1| helicase domain-containing protein [Clostridium sticklandii DSM 519] gi|308825719|emb|CBH21757.1| Helicase domain protein [Clostridium sticklandii] Length = 856 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 11/125 (8%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++ + E K+ +L +P + ++L + + ++F ++L Q Sbjct: 719 CIYGSTDFEERDFLLKLFKEKKLDVLITNPHTLAESVSLHHTCHNAIYFEYSYNLVHLLQ 778 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQ--------NTIDELVLQRLRTKSTIQDLLLNAL 198 +RI + YYL + ++DE + +RL K T + Sbjct: 779 SKDRIHRLG---LPQDQYTQYYYLQNEFFTIDNDAYSLDERIYERLLEKETTMLQAIENN 835 Query: 199 KKETI 203 K E + Sbjct: 836 KLERV 840 >gi|154498713|ref|ZP_02037091.1| hypothetical protein BACCAP_02704 [Bacteroides capillosus ATCC 29799] gi|150272253|gb|EDM99451.1| hypothetical protein BACCAP_02704 [Bacteroides capillosus ATCC 29799] Length = 943 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + + + ++ A + GLNLQ+ +++V + L W+ + +Q I R Sbjct: 481 DRRAALVDYFRD-TAEVMIAT-EAAAEGLNLQF-CSLVVNYDLPWNPQRIEQRIGRC--- 534 Query: 155 RQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V I +N D V L K + D + A Sbjct: 535 --HRYGQKSDVVVVNFINQRNFADMRVFSLLSEKFKLFDDVFGA 576 >gi|307249912|ref|ZP_07531886.1| hypothetical protein appser4_7100 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858101|gb|EFM90183.1| hypothetical protein appser4_7100 [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 955 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 DK I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 494 DKRSALIEHFKE-KAQIMIAT-EAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC--- 547 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + + + D+ VL+ L K + +L A Sbjct: 548 --HRYGQKFDVVVINFLNKRNVADQRVLELLTEKFKLFQGVLGA 589 >gi|237742749|ref|ZP_04573230.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|229430397|gb|EEO40609.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] Length = 768 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + G+I +L G G N+Q L + W + +Q Sbjct: 400 FIHDANNEKQKDEMFSKVRNGEIRVLIGSTQKMGAGTNVQTKLIALHDLDVPWRPADLEQ 459 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V VY + +NT D + Q + K ++ + Sbjct: 460 RAGRIVR----QGNENKNVEVYRYVTENTFDAYLWQTIENKQKFISQIMTS 506 >gi|225430782|ref|XP_002267239.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 719 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 25/54 (46%) Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ + R + G + V VY L +I+ +L+R +K ++ +++ Sbjct: 570 RQNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRMLKRAFSKLKLEHVVIG 623 >gi|157817600|ref|NP_001101692.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Rattus norvegicus] gi|221222728|sp|B4F769|SMAL1_RAT RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|149016063|gb|EDL75309.1| Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 (predicted) [Rattus norvegicus] gi|195540216|gb|AAI68154.1| Smarcal1 protein [Rattus norvegicus] Length = 910 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 36/101 (35%), Gaps = 7/101 (6%) Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 Q++ + + GL +++VF L+W+ Sbjct: 714 STPSADREDLCQQFQLSKGHTVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLI---- 768 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 769 -QAEDRVHRIGQTNSVGIHYLVAKGTADDYLWPLIQEKIKV 808 >gi|1932921|gb|AAB51700.1| putative helicase [Arabidopsis thaliana] Length = 117 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 7/49 (14%) Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-------KKETIHV 205 VF Y L+A+ TI+E + +R TK + +++ K+E +H+ Sbjct: 1 PVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 49 >gi|297669376|ref|XP_002812875.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like isoform 1 [Pongo abelii] gi|297669378|ref|XP_002812876.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like isoform 2 [Pongo abelii] gi|297669380|ref|XP_002812877.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like isoform 3 [Pongo abelii] Length = 954 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 57/162 (35%), Gaps = 19/162 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-------NSDLARLQKAFPQ-- 90 + + ++ I+ + ++ ++ +V H +L R + Sbjct: 699 ILFFNRTAEAKIPS-VIEYILDLL-ESGREKFLVFAHHKVVLDAITQELGRKHVQHIRID 756 Query: 91 -GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + Q++ + + + GL +++VF L+W+ Sbjct: 757 GSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTF-SSADLVVFAELFWNPGVLI--- 812 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V ++YL+A+ T D+ + ++ K + Sbjct: 813 --QAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV 852 >gi|225868848|ref|YP_002744796.1| helicase [Streptococcus equi subsp. zooepidemicus] gi|225702124|emb|CAW99793.1| putative helicase [Streptococcus equi subsp. zooepidemicus] Length = 2916 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + +G + +L G G N+Q L + W + +Q Sbjct: 2364 FIHEANSDKQKDELFARVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2423 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2424 RAGRIVR----QGNENKEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2470 >gi|324500290|gb|ADY40142.1| E3 ubiquitin-protein ligase SHPRH [Ascaris suum] Length = 1245 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 13/139 (9%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLA------RLQKAFPQGRTLDKDPCTIQEWN- 105 D I+ L I E+ A +V S + + + ++ K T+ E+ Sbjct: 1069 DAVIRRLLSIHERDPWAKTLVFTSIPSIIPVISGLLQENNIPYRNYSVGKRQVTLAEFRL 1128 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + KI +L GLNL N ++F D + Q I RI + G R + Sbjct: 1129 DPKIQVLVMPINQGARGLNLT-VANNIIFVEPQLDASQLAQAIGRID-----RIGQTRRM 1182 Query: 166 FVYYLIAQNTIDELVLQRL 184 +++ + +I+E + R+ Sbjct: 1183 MIHHFVVYGSIEEHIHHRI 1201 >gi|219871484|ref|YP_002475859.1| superfamily II DNA/RNA helicase, SNF2 family, ATP-dependent [Haemophilus parasuis SH0165] gi|219691688|gb|ACL32911.1| superfamily II DNA/RNA helicase, SNF2 family, ATP-dependent [Haemophilus parasuis SH0165] Length = 950 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 25/164 (15%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 +ANG H + + E + N A I Sbjct: 444 IANGYANQVVSFSGANHHTDAKRVYEQWLADENNAGRITGSPQVDM-------------- 489 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I + ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 490 --RTALIDHFKN-NAQIMIAT-EAAAEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC--- 541 Query: 155 RQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V ++ +N D+ VL+ L K + D + A Sbjct: 542 --HRYGQKFDVVVINFLSQRNEADQRVLELLSEKFKLFDGVFGA 583 >gi|161789119|ref|YP_001595675.1| SNF2 family protein [Vibrio sp. 0908] gi|161761405|gb|ABX77050.1| SNF2 family protein [Vibrio sp. 0908] Length = 2349 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 5/152 (3%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + K + + I+ D ++ K +N G I ++ Sbjct: 1652 NGKQIVFTEEKTQHHKLKRIIVNQLGVDEKQIGIINGSDAAGAKLQRIADSYNAGDIKIV 1711 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G+NLQ G + + +L W QQ R RQ V +YY + Sbjct: 1712 ICN-KKAEVGVNLQKGTSAIHHLTLPWTPASIQQRNGR----GVRQGNTASKVSLYYYLG 1766 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 + + D L L K + L N + E ++ Sbjct: 1767 KGSFDGYRLDLLNKKKSWMRDLFNGTESEAVN 1798 >gi|331004417|ref|ZP_08327889.1| hypothetical protein HMPREF0491_02751 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411055|gb|EGG90475.1| hypothetical protein HMPREF0491_02751 [Lachnospiraceae oral taxon 107 str. F0167] Length = 903 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 4/120 (3%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 R + + + +G+I +L G G N Q + + Sbjct: 315 MRIPEREIEFIHNSNNNREKDAIFDKVRKGEIRVLLGSTQKMGAGTNAQDKLIAIHDLDV 374 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W + Q RI Q + V+++ + +NT D + Q L K ++ + Sbjct: 375 PWRPADLSQRAGRIVR----QGNENKDVYIFRYVTENTFDAYLFQTLENKQKYISQIMTS 430 >gi|308271075|emb|CBX27685.1| hypothetical protein N47_H25070 [uncultured Desulfobacterium sp.] Length = 980 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 44/102 (43%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ + + + + G+NLQ+ ++++ + L W+ + +Q I R Sbjct: 508 RTSLIEHFRDEGS--ILLATEAAAEGINLQF-CSLVINYDLPWNPQRIEQRIGRC----- 559 Query: 157 RQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V + + N +D VL+ L K ++ + A Sbjct: 560 HRYGQRHDVVVINFLNERNEVDRRVLELLGEKFSLFSGVFGA 601 >gi|225017370|ref|ZP_03706562.1| hypothetical protein CLOSTMETH_01296 [Clostridium methylpentosum DSM 5476] gi|224949780|gb|EEG30989.1| hypothetical protein CLOSTMETH_01296 [Clostridium methylpentosum DSM 5476] Length = 2434 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + +GK+ +L + G G+N+Q + W + Q Sbjct: 2059 FVHDATSEAQRQELFERTRQGKVRILIGSTSKLGTGVNVQNKVISIDHLDCPWKPSDITQ 2118 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R RQ + + +A+ T D + Q K +L Sbjct: 2119 RNGR----GVRQGNENPEIMIKQFVAKGTFDAYLWQIQEQKLRYITQIL 2163 >gi|291392203|ref|XP_002712511.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 [Oryctolagus cuniculus] Length = 954 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 49/133 (36%), Gaps = 8/133 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWN-EGKIPLLFAHPA 117 E + A+ ++ A + +Q G T Q++ + + Sbjct: 726 EKFLVFAHHKVVLDAITKELERKHVQHIRIDGSTSSADRDALCQQFQLSERHTVAVLSIT 785 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GL +++VF L+W+ R + G +V ++YL+A+ T D Sbjct: 786 AANMGLTF-SSADLVVFAELFWNPGVLI-----QAEDRVHRIGQTNSVGIHYLVAKGTAD 839 Query: 178 ELVLQRLRTKSTI 190 + + ++ K + Sbjct: 840 DYLWPLIQEKIKV 852 >gi|309791645|ref|ZP_07686137.1| helicase [Oscillochloris trichoides DG6] gi|308226267|gb|EFO80003.1| helicase [Oscillochloris trichoides DG6] Length = 1041 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 47/156 (30%), Gaps = 23/156 (14%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCTIQEWNEGK-- 108 + ++V F L L + + + + Sbjct: 528 ETLAGEGPGKLLVFSFFIHTLNYLLQRLRTAGVRVELITGRVADEDREHLRDRFRLPRSH 587 Query: 109 ---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA- 164 I +L + C + LV + + W+ +Q I RI + G K Sbjct: 588 SKAIDVLLSSEVGCEGLDY--EFCDRLVNYDIPWNPMRIEQRIGRID-----RFGQKSPK 640 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V ++ + +T++E V R + I L L+ Sbjct: 641 VKIFNFVTPDTVEERVFFRCFERLDIFRHTLGDLEA 676 >gi|53729198|ref|ZP_00348337.1| COG0553: Superfamily II DNA/RNA helicases, SNF2 family [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208183|ref|YP_001053408.1| ATP-dependent helicase [Actinobacillus pleuropneumoniae L20] gi|126096975|gb|ABN73803.1| hypothetical ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 956 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 DK I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 494 DKRSALIEHFKE-KAQIMIAT-EAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC--- 547 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + + + D+ VL+ L K + +L A Sbjct: 548 --HRYGQKFDVVVINFLNKRNVADQRVLELLTEKFKLFQGVLGA 589 >gi|313895657|ref|ZP_07829213.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312975783|gb|EFR41242.1| SNF2 family N-terminal domain protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 403 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +K Y +RE Y +L + N +K ++ QL G + D++ + K+ AL Sbjct: 272 VKVYKNLERESYAELACGEVSTVNVLTKLLRLSQLTGGFI-TDDDGSAHPISTAKLDALS 330 Query: 61 VIIE--KANAAPIIVAYHFNSDLA 82 II+ ++ +++ F ++L Sbjct: 331 DIIDTVMSDGKKLVIMARFVAELD 354 >gi|23503224|gb|AAC43199.2| similar to Swiss-Prot Accession Number P32333, yeast helicase protein [Mycoplasma genitalium] Length = 72 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 23/48 (47%) Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +E R + G + V VY +IA+NTI+E V Q K + L Sbjct: 5 VENQATDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQNQKQELVKKTL 52 >gi|291240565|ref|XP_002740192.1| PREDICTED: Chromodomain-helicase-DNA-binding protein 1-like [Saccoglossus kowalevskii] Length = 938 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/179 (11%), Positives = 46/179 (25%), Gaps = 28/179 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV------HDEK 55 K Y + G + ++ +L N E + K Sbjct: 768 KNYKALSK-------GLKGNLSGFLNIMMELKKLCNHPYLIRPEDNGITDLENLIRTSGK 820 Query: 56 IKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCTIQE 103 + L+ ++ + + +++ L L + + Sbjct: 821 VHLLDKLLTRLHETGHRVLIFSQMVRMLDILADYLSMKHWPFQRLDGSISSEVRKQALDH 880 Query: 104 WNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 +N + G G+NL + ++ F W+ + Q R QR Sbjct: 881 FNAEGSMDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQNDLQAQARAHRIGQRNQN 938 >gi|89885781|ref|YP_515979.1| helicase-like [Rhodoferax ferrireducens T118] gi|89347779|gb|ABD71981.1| helicase-like [Rhodoferax ferrireducens T118] Length = 1726 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 4/116 (3%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + +T + G I +L + CG G N+Q + + W Sbjct: 1322 HHEIAFIHEAQTHHAKSALFAKVRAGTIRVLIGSTSKCGMGTNVQTRLYAVHHLTTPWRP 1381 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + QQ RI Q A+ ++ + T D + Q L K+ +L+ Sbjct: 1382 SDLQQRDGRIER----QGNTCEAIEIWRYVTSGTFDAYMWQTLTAKAGFIAQVLSG 1433 >gi|86609161|ref|YP_477923.1| helicase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557703|gb|ABD02660.1| putative helicase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 964 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 60/198 (30%), Gaps = 35/198 (17%) Query: 15 LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPII 72 L + + ++ K LQ G HD K+ +++K I Sbjct: 440 LPDSDRRRLQALARLAKQLQ---GP-----------EHDTKLARAIELVKKLLQEGFHPI 485 Query: 73 VAYHFNSDLAR-------------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 + + + ++ I + +L A Sbjct: 486 LWCRYVATAEYLDSYLRQQLGSPAQVACVTGRMGDEEREAKIANLEVDRPRVLVAT-DCL 544 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-IDE 178 G+NLQ ++ + L W+ +Q R+ Q+ + V V ++ +D Sbjct: 545 SEGINLQEKFTAVIHYDLPWNPNRLEQREGRVDRYGQKASR----VKVIRFFGRDNPVDG 600 Query: 179 LVLQRLRTKSTIQDLLLN 196 +VL+ L K+ L Sbjct: 601 VVLEVLLNKAREIHRTLG 618 >gi|313224277|emb|CBY20066.1| unnamed protein product [Oikopleura dioica] Length = 817 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 6/91 (6%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 R+ D+ Q N I + G+ L + +VF L + Sbjct: 527 RSDDRTTYVEQFQNNENIKCALLSITAVNMGVTLTK-ASTVVFAELHYTPGVMV-----Q 580 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 R + G + V + YLIA+NT DE + + Sbjct: 581 AEDRAHRIGRETDVNIEYLIAKNTADEWIWR 611 >gi|256845761|ref|ZP_05551219.1| helicase [Fusobacterium sp. 3_1_36A2] gi|256719320|gb|EEU32875.1| helicase [Fusobacterium sp. 3_1_36A2] Length = 2122 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + G+I +L G G N+Q L + W + +Q Sbjct: 1762 FIHDANDEKQKDEMFTKVRSGEIRVLIGSTQKMGAGTNVQTKLIALHDLDVPWRPADLEQ 1821 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V VY + +NT D + Q + K ++ + Sbjct: 1822 RAGRIVR----QGNENKNVEVYRYVTENTFDAYLWQTIENKQKFISQIMTS 1868 >gi|323449667|gb|EGB05553.1| hypothetical protein AURANDRAFT_17570 [Aureococcus anophagefferens] Length = 76 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 28/82 (34%), Gaps = 6/82 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + S G GLNL N+L D E V R + G R V Sbjct: 1 DPLTSVCLLTVRSAGVGLNLTN-ANVLCLCEPALDAA-----PEEQAVMRVHRIGQTRPV 54 Query: 166 FVYYLIAQNTIDELVLQRLRTK 187 V A T+D VL R + Sbjct: 55 TVLKFFAAGTVDARVLARRERR 76 >gi|303250388|ref|ZP_07336586.1| ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252258|ref|ZP_07534155.1| hypothetical protein appser6_7760 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650714|gb|EFL80872.1| ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860180|gb|EFM92196.1| hypothetical protein appser6_7760 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 957 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 DK I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 495 DKRSALIEHFKE-KAQIMIAT-EAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC--- 548 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + + + D+ VL+ L K + +L A Sbjct: 549 --HRYGQKFDVVVINFLNKRNVADQRVLELLTEKFKLFQGVLGA 590 >gi|189036176|gb|ACD75438.1| AMDV4_9 [uncultured virus] Length = 542 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 40/123 (32%), Gaps = 6/123 (4%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 E I +V + A +++ + N+ + + Sbjct: 404 EDKIVVFAHHHDVVDAIYEKFKDISVVATGNESLNERNDAVNKFQNDPSCKIFIGSIQAM 463 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+ L + ++F + W + R + G K V V YL+ ++ID Sbjct: 464 GVGITLTA-SSTVIFTEIEWRPGDLT-----QAEDRLHRIGQKSTVLVQYLVVNDSIDSY 517 Query: 180 VLQ 182 ++ Sbjct: 518 MID 520 >gi|322493527|emb|CBZ28815.1| hypothetical protein, unknown function [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1232 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 7/127 (5%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGN 130 +V Y + A G + + +++ + + + G G+NLQ + Sbjct: 772 LVDYLHSRGWANHAVVLTGGSSEAERLTSVRRFREDPACLFFLLSIKAGGCGINLQA-AH 830 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 ++V + E + R + G + V YL + ++ V QR K+ Sbjct: 831 MVVLVDRDYTATN-----EDQALARVYRIGQRYTVRAVYLATTDASEQRVAQRAAAKNKP 885 Query: 191 QDLLLNA 197 + ++N Sbjct: 886 RQAIIND 892 >gi|303252378|ref|ZP_07338544.1| ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247677|ref|ZP_07529718.1| hypothetical protein appser2_6710 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648837|gb|EFL79027.1| ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855845|gb|EFM88007.1| hypothetical protein appser2_6710 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 957 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 DK I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 495 DKRSALIEHFKE-KAQIMIAT-EAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC--- 548 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + + + D+ VL+ L K + +L A Sbjct: 549 --HRYGQKFDVVVINFLNKRNVADQRVLELLTEKFKLFQGVLGA 590 >gi|307245561|ref|ZP_07527648.1| hypothetical protein appser1_7650 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254516|ref|ZP_07536352.1| hypothetical protein appser9_7640 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258973|ref|ZP_07540704.1| hypothetical protein appser11_7700 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853620|gb|EFM85838.1| hypothetical protein appser1_7650 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862566|gb|EFM94524.1| hypothetical protein appser9_7640 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866997|gb|EFM98854.1| hypothetical protein appser11_7700 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 957 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 DK I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 495 DKRSALIEHFKE-KAQIMIAT-EAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC--- 548 Query: 155 RQRQAGFKRAVFVYYLIAQNTI-DELVLQRLRTKSTIQDLLLNA 197 + G K V V + + + D+ VL+ L K + +L A Sbjct: 549 --HRYGQKFDVVVINFLNKRNVADQRVLELLTEKFKLFQGVLGA 590 >gi|328848699|gb|EGF97901.1| hypothetical protein MELLADRAFT_84173 [Melampsora larici-populina 98AG31] Length = 206 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 6/96 (6%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + ++ + N I + G GLN+ + + W+ + QQ Sbjct: 83 HGEMTPQERILQLNRFQNNNNIEAFIVSIEAGGVGLNMT-CADEVYLMDAHWNSQIVQQA 141 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 I+R+ Q G V VY+++A ++++ + Sbjct: 142 IDRL-----HQIGQTHPVKVYHVVAGGSVEQHLFNV 172 >gi|296416157|ref|XP_002837747.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633630|emb|CAZ81938.1| unnamed protein product [Tuber melanosporum] Length = 2127 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 53/144 (36%), Gaps = 15/144 (10%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLA---RLQKAFPQGRTLDK-----DPCTIQE 103 K++ + +I+K I+V F + ++ K + G K +Q+ Sbjct: 1969 MKLEKMMHLIQKLIPVDEKILVFVQFTDLMEKVAQVLKEYKIGFLQIKGSAAAQSKALQQ 2028 Query: 104 WNE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM-IERIGVTRQRQ 158 + E I +L + N +F S +++ E + R R+ Sbjct: 2029 FQESAEKDNIKVLLLNVMDESASGANLTNANHAIFLSPLLTTTDYEYRSCETQAIGRVRR 2088 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQ 182 G + V V+ + +N+ID + Q Sbjct: 2089 YGQTKKVHVWRFLTENSIDVEIFQ 2112 >gi|224009261|ref|XP_002293589.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970989|gb|EED89325.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 83 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I ++ G++ +L + G NLQ +V EH +E+ + R + Sbjct: 3 RAITDFTTGEVSILLLSAQAKASGANLQ-CATNVVLLDPAGSSAEHGATLEQQAIGRAVR 61 Query: 159 AGFKRAVFVYYLIAQNTIDE 178 G + AV V + +++I+E Sbjct: 62 MGQENAVKVVRFLVKDSIEE 81 >gi|323948950|gb|EGB44844.1| hypothetical protein ERKG_04570 [Escherichia coli H252] Length = 2278 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 65/213 (30%), Gaps = 19/213 (8%) Query: 4 YHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK----------EVH 52 Y L L G+ I + ++ K ++ A+ E++ + Sbjct: 1356 YAALIENLREGLKNGKQIVFIDEKAQHQKLRRIIASALQMPEQEIGIINATTVSQAGGIK 1415 Query: 53 DEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 +K+ N Y+ + L+ ++NEG+ Sbjct: 1416 LKKVNKPTEPTPNKNGEYKEGAWETYYSKLAQYEDYLSAKNDAGLEGMEGIAADYNEGRT 1475 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ + G+NL G + +L W Q R Q V V+Y Sbjct: 1476 RIIICN-KKAEVGINLHIGTTDIHHLTLPWTPASIDQRNGRGARVGSPQ----EKVNVHY 1530 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + T D+ L L+ K +++ + E Sbjct: 1531 YCGKGTFDDFRLDTLKRKKDWIKMVMTSDMSEI 1563 >gi|282900231|ref|ZP_06308184.1| Helicase-like protein [Cylindrospermopsis raciborskii CS-505] gi|281194873|gb|EFA69817.1| Helicase-like protein [Cylindrospermopsis raciborskii CS-505] Length = 1019 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 60/180 (33%), Gaps = 19/180 (10%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPI 71 + + E+ + ++ QLA + + + V + K+ L+ ++ + + Sbjct: 521 LHEDEEEDSNFIADNGEILELTQLALELLSFSDANGQPGVENAKLDWLKGMLNRDPESKF 580 Query: 72 IVAY-------HFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-----GKIPLLFAHPASC 119 ++ L +L + T+ I +L A ++ Sbjct: 581 LIFTESLQTCEIIIKALPGYSGKLTGDMSLSQREDTVARLRGLGERGSNIRVLVAT-SAA 639 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G + Q N ++ + L + Q R+ + G V YYLI +T +E Sbjct: 640 DEGFDFQT-ANRVIHWDLTPNPAVLMQRNGRVA-----RLGQISDVIAYYLIIADTHEEK 693 >gi|297259808|ref|XP_002808003.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 6-like [Macaca mulatta] Length = 2668 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 23/52 (44%) Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G +AV VY LI +N+ + + + K + +L + ++ Sbjct: 934 QAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 985 >gi|330844016|ref|XP_003293935.1| hypothetical protein DICPUDRAFT_99797 [Dictyostelium purpureum] gi|325075687|gb|EGC29545.1| hypothetical protein DICPUDRAFT_99797 [Dictyostelium purpureum] Length = 1247 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 20/151 (13%) Query: 44 EEKHWKEVHDEKIKAL----EVIIEKANAAPIIVAYHFNSDLARLQK-----------AF 88 ++ +E K++ L E + K + IV FN L ++ + Sbjct: 1000 HQQIQEEFKSCKLEYLIQRLEELDAKEDPIKTIVFTQFNETLYEIEWSLKFKTNLKYLVY 1059 Query: 89 PQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 ++L + TI + ++ + +G+NL N ++F Sbjct: 1060 NTHQSLRERSSTINSFQTNQDYKIIVMNVDLAAYGINLTA-ANHIIFVDPIP---IWNIS 1115 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 ER + R + G + V V LI N+I++ Sbjct: 1116 KERQAIKRAHRIGQTKPVTVEKLIINNSIEQ 1146 >gi|320530347|ref|ZP_08031412.1| protein, SNF2 family [Selenomonas artemidis F0399] gi|320137407|gb|EFW29324.1| protein, SNF2 family [Selenomonas artemidis F0399] Length = 1167 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 8/110 (7%) Query: 89 PQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G D + + + ++ +L A A+ G+NLQ +++V + L W+ +Q Sbjct: 532 HGGMLRDDRCKVEELFKQDKEVRILIATDAAG-EGINLQR-AHLMVNYDLPWNPNRLEQR 589 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+++ T + +V QRL K + L+ Sbjct: 590 FGRI-----HRIGQTEVCHLWNLVSKETREGMVFQRLFDKLEQEREALHG 634 >gi|84997577|ref|XP_953510.1| DEAD-box family helicase [Theileria annulata strain Ankara] gi|65304506|emb|CAI76885.1| DEAD-box family helicase, putative [Theileria annulata] Length = 927 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 64/213 (30%), Gaps = 48/213 (22%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 + +++ + S K QL + K +E I+E N I + Sbjct: 705 KDSDVKRAH-LSLMSKLFQLT-----------GESKTKGVCKYIEEILENNNKFIIFAHH 752 Query: 76 HFNSDLARL--------QKAFPQGRTLDKDPCTIQEWNEGK------------------- 108 F D ++ + + Sbjct: 753 MFMMDAIEDTLKSKKVGYIRIDGSTKINDRARLVNLFQNNSASNESKSDAKANKVEGDDS 812 Query: 109 ----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + SCG GLNL + ++F L+W Q +R+ Sbjct: 813 PNNGVRVALLSLTSCGVGLNLTS-SSTVIFAELYWVPGVLLQAEDRVHRI----GTKFNK 867 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + YLIAQN+++E++ + + K L+ Sbjct: 868 ININYLIAQNSVEEVMWKVINKKYKTVTSTLDG 900 >gi|322656978|gb|EFY53262.1| defense against restriction protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] Length = 2278 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 65/213 (30%), Gaps = 19/213 (8%) Query: 4 YHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK----------EVH 52 Y L L G+ I + ++ K ++ A+ E++ + Sbjct: 1356 YAALIENLREGLKNGKQIVFIDEKAQHQKLRRIIASALQMPEQEIGIINATTVSQAGGIK 1415 Query: 53 DEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 +K+ N Y+ + L+ ++NEG+ Sbjct: 1416 LKKVNKPTEPTPNKNGEYKEGAWETYYSKLAQYEDYLSAKNDAGLEGMEGIAADYNEGRT 1475 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ + G+NL G + +L W Q R Q V V+Y Sbjct: 1476 RIIICN-KKAEVGINLHIGTTDIHHLTLPWTPASIDQRNGRGARVGSPQ----EKVNVHY 1530 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + T D+ L L+ K +++ + E Sbjct: 1531 YCGKGTFDDFRLDTLKRKKDWIKMVMTSDMSEI 1563 >gi|307694006|ref|ZP_07636243.1| SNF2-related protein [Ruminococcaceae bacterium D16] Length = 1320 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 937 FIHEANTEVRKKELFSKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 996 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + K ++ + Sbjct: 997 RKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 1043 >gi|289523749|ref|ZP_06440603.1| type III restriction enzyme, res subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503441|gb|EFD24605.1| type III restriction enzyme, res subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 1137 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 69/195 (35%), Gaps = 21/195 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + ++ + +E +K + ++ + ++ + +I Sbjct: 447 DEIEKLESLVAMAKEVEKKGVETKLNELKKV------------MESEKLQETETKLLIFT 494 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 ++ + S + + N+ +I + + G G+N Sbjct: 495 ESKDTLEYLVEKLKSWGYSVTYIHGGMNLDARIKAEADFKNQAQIMV---STEAGGEGIN 551 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 LQ+ ++V + + W+ +Q + R+ + G + V +Y L+A +T + +L RL Sbjct: 552 LQF-CWLMVNYDIPWNPNRLEQRMGRV-----HRYGQRNEVHIYNLVAIDTREGQILSRL 605 Query: 185 RTKSTIQDLLLNALK 199 K + L + + Sbjct: 606 FEKLSNIRSHLGSDR 620 >gi|291086755|ref|ZP_06571656.1| putative MutS domain I [Clostridium sp. M62/1] gi|291076845|gb|EFE14209.1| putative MutS domain I [Clostridium sp. M62/1] Length = 2973 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 54/179 (30%), Gaps = 13/179 (7%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN 78 +I +A QL N ++ E+ + + E I +I Sbjct: 2531 DISTPQAAPPQKAAKQLDNPTLHALEDAIPLDKPEPAFTIYEDI-----RQKLIAQG--- 2582 Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 A + T + + G++ +L + G G N+Q L Sbjct: 2583 -MPANQIAFIHEANTEVRKKELFAKVRTGQVRVLLGSTSKMGAGTNVQDRLVALHDLDCP 2641 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W + Q RI + V VY + + T D + Q + K ++ + Sbjct: 2642 WRPGDLAQRKGRIERQGNKNPL----VHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 2696 >gi|218133843|ref|ZP_03462647.1| hypothetical protein BACPEC_01732 [Bacteroides pectinophilus ATCC 43243] gi|217991218|gb|EEC57224.1| hypothetical protein BACPEC_01732 [Bacteroides pectinophilus ATCC 43243] Length = 1123 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 23/198 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + ++ D +G I A Y K + ++ ++ Sbjct: 682 QRMLNDMLPDFEGSKINA--------------CVDNIYRIWKENADKKSAQLVFCDLSTP 727 Query: 65 KANAAPIIVAYHFNSDLAR-----LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 K + + + R K + T K Q+ +G++ +L Sbjct: 728 KNDGTFSVYNDIRKKLIERGIPESEVKFIHEADTDMKKKELFQKTRKGEVRVLLGSTQKM 787 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G N+Q L W + +Q RI Q V +Y + + T D Sbjct: 788 GAGTNVQDKLIALHDVDCPWRPSDLEQRSGRIVR----QGNENPQVDIYRYVTEQTFDAY 843 Query: 180 VLQRLRTKSTIQDLLLNA 197 + Q + K ++ + Sbjct: 844 LYQLVEGKQKFASQIMTS 861 >gi|193698855|ref|XP_001947409.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like [Acyrthosiphon pisum] Length = 1178 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 14/129 (10%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNEGKIPL 111 +I + +++ +++ L L +A Q + + KI Sbjct: 1023 IELITQDPNVKVLIFSNWDKALNLLGEALDQNSISYRILKPGTKYKKTLKDFKSNKKINA 1082 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + GLNL + F + + Q I RI + G + FV+ I Sbjct: 1083 LLMKLSLGSKGLNLTE-ATRVFFMEPIINKADEHQAIGRI-----HRIGQTKPTFVHNFI 1136 Query: 172 AQNTIDELV 180 +++I+E + Sbjct: 1137 IRDSIEENI 1145 >gi|299067109|emb|CBJ38305.1| putative Helicase domain protein [Ralstonia solanacearum CMR15] Length = 461 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 8/112 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 L++ ++ ++EGK ++ P+ GHGLN Q+ + F + E + Q + R Sbjct: 325 SMDLEEKEDRLRAFSEGKARVIVTKPSIAGHGLNWQHAA-RMAFVGVTDSYEAYYQAVRR 383 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 I + G KR V+ ++ + V+ L+ K + AL ET Sbjct: 384 IW-----RFGQKRDCHVHIFASK--AEGAVVANLKRKEREAAQMAEALSAET 428 >gi|189193863|ref|XP_001933270.1| ATP-dependent DNA helicase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187978834|gb|EDU45460.1| ATP-dependent DNA helicase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1528 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 40/130 (30%), Gaps = 8/130 (6%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK---AFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + L I + A I+ F L L+ + G + D I+++ + Sbjct: 1260 RHLIWIRKNDPGAKSIIFSQFGDFLGVLRDALDKWKIGASSIADRNGIRKFKTDQSVECL 1319 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 A + + IE + R + G +R V+ + Sbjct: 1320 LLDAKTDSSGLTLVNATYVFLCEPLINPA-----IELQAINRVHRIGQQRPTTVFMYLIS 1374 Query: 174 NTIDELVLQR 183 +T++E + Sbjct: 1375 DTVEEAIYDI 1384 >gi|167539868|ref|XP_001741391.1| hypothetical protein [Entamoeba dispar SAW760] gi|165894093|gb|EDR22177.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 881 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 5/130 (3%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 Y+ + + + ++ +K ++ + + GL Q + +F Sbjct: 670 YNLQRKKVQFIRIDGETKSENKKEFVDIFRDDDNCRVAVLSILAANCGLEFQKAA-LCIF 728 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + E Q +R+ Q +V + YLIA + DE + + K + + Sbjct: 729 AEMTFVPGEMLQAEDRLHRIGQ----QADSVKIEYLIANKSYDEQIWNTIEKKLDVVGKV 784 Query: 195 LNALKKETIH 204 L+ +E H Sbjct: 785 LDGKSRELDH 794 >gi|119952338|ref|YP_950158.1| putative helicase [Arthrobacter aurescens TC1] gi|119951468|gb|ABM10378.1| putative Helicase [Arthrobacter aurescens TC1] Length = 1884 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 6/110 (5%) Query: 88 FPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + G I +L G G N+Q L W + Sbjct: 1472 RFMHEANNDRAKARLFEQARTGHIAVLIGSTEKMGVGTNVQRRAVALHHVDCPWRPADLA 1531 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q RI Q +V VY + +++ D + Q + K+ + L+ Sbjct: 1532 QRDGRIMR----QGNLNDSVRVYRYVTESSFDTYLWQTVERKAKFINQLM 1577 >gi|108756908|ref|YP_635362.1| SNF2 domain/helicase domain-containing protein [Myxococcus xanthus DK 1622] gi|108460788|gb|ABF85973.1| SNF2 domain/helicase domain protein [Myxococcus xanthus DK 1622] Length = 994 Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 37/111 (33%), Gaps = 12/111 (10%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +L P + G GLN+ N ++ + WW+ + E R Sbjct: 874 QNIDAFSRAKGFQVLILSPLAAGAGLNIVA-ANHVIHYGRWWNPAK-----EDQATDRAH 927 Query: 158 QAGFKRAVFVYY--LIAQN----TIDELVLQRLRTKSTIQDLLLNALKKET 202 + G R V VYY L Q D + + K I L+ +T Sbjct: 928 RIGQVRPVHVYYPLLHRQGRPDMGFDLRLHDLVERKRAIARDFLSPTNDDT 978 >gi|307110374|gb|EFN58610.1| hypothetical protein CHLNCDRAFT_140806 [Chlorella variabilis] Length = 248 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + + +L +GLNL +V D +E V R + G RA Sbjct: 88 QQRQPQVLLLLVKQGANGLNLTE-AQHVVLVEPQLDPA-----VEAQAVGRVDRIGQLRA 141 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V+ + + T++E V + + ++ DL ++K Sbjct: 142 THVHRFVVEKTVEENVHRLCQRRAAAMDLSAASVK 176 >gi|323179607|gb|EFZ65170.1| helicase conserved C-terminal domain protein [Escherichia coli 1180] Length = 2278 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 65/213 (30%), Gaps = 19/213 (8%) Query: 4 YHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWK----------EVH 52 Y L L G+ I + ++ K ++ A+ E++ + Sbjct: 1356 YAALIENLREGLKNGKQIVFIDEKAQHQKLRRIIASALQMPEQEIGIINATTVSQAGGIK 1415 Query: 53 DEKIKALEVIIEKANAA---PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 +K+ N Y+ + L+ ++NEG+ Sbjct: 1416 LKKVNKPTEPTPNKNGEYKEGAWETYYSKLAQYEDYLSAKNDAGLEGMEGIAADYNEGRT 1475 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ + G+NL G + +L W Q R Q V V+Y Sbjct: 1476 RIIICN-KKAEVGINLHIGTTDIHHLTLPWTPASIDQRNGRGARVGSPQ----EKVNVHY 1530 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + T D+ L L+ K +++ + E Sbjct: 1531 YCGKGTFDDFRLDTLKRKKDWIKMVMTSDMSEI 1563 >gi|154279480|ref|XP_001540553.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150412496|gb|EDN07883.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 1296 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 23/191 (12%), Positives = 51/191 (26%), Gaps = 64/191 (33%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN--AAPIIVAYHFNS 79 + A + LQ G K++ L+ ++ K ++ Sbjct: 983 RLSIAFPDKRLLQYDCG----------------KLQQLDKLLRKLQSGGHRALIFTQMTK 1026 Query: 80 DLARLQKAFPQGRTLD----------KDPCTIQEWNEG-KIPLLFAHPASCGHGLNLQYG 128 L L++ + + +N +I S Sbjct: 1027 MLDILEQFLNIHGHRYLRLDGATKVEQRQMLTERFNNDTRILAFILSSRS---------- 1076 Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 R + G R V +Y I++ TI+ +L++ K Sbjct: 1077 -------------------------DRCHRIGQTRDVHIYRFISEYTIESNILRKANQKR 1111 Query: 189 TIQDLLLNALK 199 + D+++ + Sbjct: 1112 MLDDVIIQEGE 1122 >gi|220930539|ref|YP_002507448.1| helicase [Clostridium cellulolyticum H10] gi|220000867|gb|ACL77468.1| helicase domain protein [Clostridium cellulolyticum H10] Length = 2077 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 35/112 (31%), Gaps = 4/112 (3%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 +T + G+ ++ G G N+Q L W + + Sbjct: 1700 CIIHDAKTKKQKESMFSAMRTGEKRIILGSTPKMGTGTNIQNKLVALHHLDCPWRPADIE 1759 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q RI Q V ++ + ++T D + Q + K ++ + Sbjct: 1760 QRDGRILR----QGNENEKVEIFRYVTKDTFDGYLWQTVEQKQRFISQIMTS 1807 >gi|223985013|ref|ZP_03635111.1| hypothetical protein HOLDEFILI_02415 [Holdemania filiformis DSM 12042] gi|223962985|gb|EEF67399.1| hypothetical protein HOLDEFILI_02415 [Holdemania filiformis DSM 12042] Length = 2945 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 2562 FIHEANTEVRKKELFSKVRTGQVRVLMGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 2621 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + K ++ + Sbjct: 2622 RKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 2668 >gi|169852446|ref|XP_001832907.1| hypothetical protein CC1G_10583 [Coprinopsis cinerea okayama7#130] gi|116506042|gb|EAU88937.1| hypothetical protein CC1G_10583 [Coprinopsis cinerea okayama7#130] Length = 1280 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 6/104 (5%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 R + Q ++ + K + GLNL + ++F Sbjct: 1077 IHVRFLRFTTQVSPQIREQLVLTFETSEKYRVFLMELKHGARGLNLVS-ASRVIFCEP-- 1133 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 Q +E + R + G R + V L + T +E ++ R Sbjct: 1134 ---VWQADVESQAIKRVHRIGQTRPITVKTLAIKGTHEENMVAR 1174 >gi|307263345|ref|ZP_07544963.1| hypothetical protein appser13_7640 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306871407|gb|EFN03133.1| hypothetical protein appser13_7640 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 957 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 495 DRRSALIEHFKE-KAQIMIAT-EAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC--- 548 Query: 155 RQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ VL+ L K + +L A Sbjct: 549 --HRYGQKFDVVVINFLNKRNLADQRVLELLTEKFKLFQGVLGA 590 >gi|330892659|gb|EGH25320.1| SNF2-related:helicase [Pseudomonas syringae pv. mori str. 301020] Length = 64 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 22/35 (62%) Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + VFVY +IA+ T++E + + R KS + +L+ Sbjct: 1 KPVFVYKMIARGTVEEKIQRLQREKSALASGVLDG 35 >gi|262113299|emb|CBH29315.1| superfamily II DNA/RNA helicase, SNF2 family [uncultured bacterium] Length = 129 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G+T ++ Q N+ +I + + G GLNL + + WW+ +E Sbjct: 21 GQTTNRSKVVEQFQNDDQIRVFLISLKAGGIGLNLTQ-ADYVYLIDPWWNPA-----VEN 74 Query: 151 IGVTRQRQAGFKRAVFVYYL 170 + R + G ++ V L Sbjct: 75 QAIDRVYRIGQQKNVVAVRL 94 >gi|258545975|ref|ZP_05706209.1| helicase/SNF2 domain protein [Cardiobacterium hominis ATCC 15826] gi|258518780|gb|EEV87639.1| helicase/SNF2 domain protein [Cardiobacterium hominis ATCC 15826] Length = 937 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 DK I + ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 473 DKRAALIDRFRHDA-QIMIAT-EAAAEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC--- 526 Query: 155 RQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V + + N D+ +L+ L K + L A Sbjct: 527 --HRYGQESDVVVINFLNRRNEADKRILELLTEKFQLFSGLFGA 568 >gi|188591846|ref|YP_001796445.1| putative DNA/RNA helicase, SNF2 family [Cupriavidus taiwanensis] gi|170939241|emb|CAP64284.1| putative DNA/RNA helicase, SNF2 family [Cupriavidus taiwanensis LMG 19424] Length = 948 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + ++ A + G+NLQ+ +++V + L W+ + +Q I R Sbjct: 487 RAALVDYFRD-HATVMIAT-EAAAEGINLQF-CSMVVNYDLPWNPQRIEQRIGRC----- 538 Query: 157 RQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V + +N D V + L K + + A Sbjct: 539 HRYGQRYDVVVVNFLNRKNEADRRVFELLSEKFRLFSGVFGA 580 >gi|225376799|ref|ZP_03754020.1| hypothetical protein ROSEINA2194_02441 [Roseburia inulinivorans DSM 16841] gi|225211425|gb|EEG93779.1| hypothetical protein ROSEINA2194_02441 [Roseburia inulinivorans DSM 16841] Length = 1077 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 694 FIHEANTEVRKKELFSKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 753 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + K ++ + Sbjct: 754 RKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 800 >gi|121533618|ref|ZP_01665445.1| helicase domain protein [Thermosinus carboxydivorans Nor1] gi|121307609|gb|EAX48524.1| helicase domain protein [Thermosinus carboxydivorans Nor1] Length = 1163 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 6/107 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G ++ + + K + + G G+NLQ N+++ + L W+ +Q R Sbjct: 543 GMGREERKRVQELFTHDKHVHILIATDAAGEGINLQR-ANLMINYDLPWNPNRLEQRFGR 601 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + G ++ ++A +T + V RL K + L Sbjct: 602 I-----HRIGQTEVCHLWNMVAVDTREGEVYFRLLKKLEEEREALGG 643 >gi|317035065|ref|XP_003188905.1| hypothetical protein ANI_1_1382124 [Aspergillus niger CBS 513.88] Length = 282 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 22/164 (13%) Query: 50 EVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKA-----FPQGRTLDKDPCT 100 + K+ + I+ + + I++ F + L +P K Sbjct: 74 HMPSAKLTKIREILTEWLAQDSPGKIVIFTQFLDFVQILATMCQAENWPYVLLTGKLSLA 133 Query: 101 IQEWN-------EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++E N + + ++ A + G GL+L N + LWW+ + I+ Sbjct: 134 VRENNMTLFSDKDSEKRIMIASLKAGGTGLDL-SAANKCILVDLWWN-----EAIQEQAF 187 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + G + V LI +N+ID+ +L K+ I + Sbjct: 188 CRLFRIGQESEVEFVKLIIENSIDDYLLNLQTHKTAIITGAMGE 231 >gi|319788873|ref|YP_004090188.1| N-6 DNA methylase [Ruminococcus albus 7] gi|315450740|gb|ADU24302.1| N-6 DNA methylase [Ruminococcus albus 7] Length = 2936 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 44/109 (40%), Gaps = 6/109 (5%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ +G+ + A + G G N+Q + + W + Q R Sbjct: 2550 RAEMFEQLRQGEKRFILASTSKLGTGANIQDRICAIHHLDIPWKPADLTQQDGR----GV 2605 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 RQ + V +Y+ + +NT D ++ + K+ + ++ + K+ + V Sbjct: 2606 RQGNMFKEVGIYHYLTENTFDAYMMGIITNKAKFINQIMTS--KDPVRV 2652 >gi|302134007|ref|ZP_07259997.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 89 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 6/78 (7%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G NL N + F L W R + G R V V +A++TID+ Sbjct: 3 AGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLAEDTIDQ 56 Query: 179 LVLQRLRTKSTIQDLLLN 196 + Q L K + L++ Sbjct: 57 QLWQMLMDKRALASDLID 74 >gi|324505946|gb|ADY42546.1| SMARCAL1-like protein [Ascaris suum] Length = 696 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 6/108 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R + + ++ + + + + G G+ L ++VF L W+ Sbjct: 551 RSIRIDGTTASKSREEQCRLFQEDDDVVVAILSMTAAGLGITLTA-ATVVVFAELHWNPG 609 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + R + G +VFV YL+A T D+++ ++ K + Sbjct: 610 TL-----KQAEDRAHRVGQTDSVFVQYLLANRTADDVMWPLIQRKLDV 652 >gi|315045562|ref|XP_003172156.1| hypothetical protein MGYG_04745 [Arthroderma gypseum CBS 118893] gi|311342542|gb|EFR01745.1| hypothetical protein MGYG_04745 [Arthroderma gypseum CBS 118893] Length = 1517 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LL 112 + L + + A IV F S L + F G + + I+ + E Sbjct: 1246 RHLLWLRQHDPGAKSIVFSQNKSFLSTLRLVFYRFKIGHSSIDEQSGIERFKEDHTKECF 1305 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G + V+ + Sbjct: 1306 LLHAKAHASGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHQDTTVWMYLV 1359 Query: 173 QNTIDELVLQR 183 NT++E + Q Sbjct: 1360 ANTVEETIYQI 1370 >gi|299144309|ref|ZP_07037389.1| superfamily II DNA and RNA helicase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518794|gb|EFI42533.1| superfamily II DNA and RNA helicase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 2878 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G + +L G G N+Q L + W + +Q Sbjct: 2326 FIHEANSDKQKDELFAKVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2385 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2386 RAGRIVR----QGNENKEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2432 >gi|225870596|ref|YP_002746543.1| conjugative transposon DNA recombination protein [Streptococcus equi subsp. equi 4047] gi|213033071|emb|CAP20354.1| putative conjugative transposon DNA recombination protein [Streptococcus equi subsp. equi] gi|225700000|emb|CAW93996.1| putative conjugative transposon DNA recombination protein [Streptococcus equi subsp. equi 4047] Length = 3975 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + +G+I +L G G N Q + W + +Q Sbjct: 3394 FIHNAKNNKEKDKIFDKVRKGEIRVLLGSTQKMGAGTNAQNKLIATHDLDVPWRPADLEQ 3453 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ I +NT D + Q L TK T ++N+ Sbjct: 3454 RKGRIVR----QGNENDDVHIFRYITENTFDAYLFQTLETKQTYISQIMNS 3500 >gi|311274878|ref|XP_003134494.1| PREDICTED: hypothetical protein LOC100519806 [Sus scrofa] Length = 1369 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/169 (11%), Positives = 48/169 (28%), Gaps = 24/169 (14%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV-------H 52 K Y + + L N + ++ + N + + + Sbjct: 1171 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGDPDAPDFQLQAMIQA 1230 Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 1231 AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAA 1290 Query: 101 IQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 I + + + + G G+NL + + F W+ + Q Sbjct: 1291 IDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQNDLQC 1338 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 31/95 (32%), Gaps = 5/95 (5%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEE-----HQQMIERIGVTRQRQAGFKRAVFV 167 + + L + F W ++ R + G +AV V Sbjct: 104 VSSAMTHNRTSQLLTPHAMQHFPVPWAAAIVSADMPCMVLLPAQAQARCHRIGQSKAVKV 163 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Y LI +N+ + + + K + +L + ++ Sbjct: 164 YRLITRNSYEREMFDKASLKLGLDKAVLQDINRKG 198 >gi|307244223|ref|ZP_07526338.1| N-6 DNA Methylase [Peptostreptococcus stomatis DSM 17678] gi|306492373|gb|EFM64411.1| N-6 DNA Methylase [Peptostreptococcus stomatis DSM 17678] Length = 2909 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G + +L G G N+Q L + W + +Q Sbjct: 2357 FIHEANSDKQKDELFAKVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2416 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2417 RAGRIVR----QGNENKEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2463 >gi|309799880|ref|ZP_07694085.1| helicase [Streptococcus infantis SK1302] gi|308116470|gb|EFO53941.1| helicase [Streptococcus infantis SK1302] Length = 869 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 9/122 (7%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + + GR+++ + + E +L + GLNLQ+ N ++ + Sbjct: 455 YRAWQVKNFGKTNYGRSVEYKHAIVDYFKE-HSKVLIVT-DAGSEGLNLQF-CNTVINYD 511 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLL 195 L W+ ++ +Q I R + G K V L+ N D V + L K + D + Sbjct: 512 LPWNPQKIEQRIGRC-----HRYGQKYDVVAINLLNTGNEADRRVYEILSKKFELFDGIF 566 Query: 196 NA 197 A Sbjct: 567 GA 568 >gi|291541334|emb|CBL14445.1| DNA methylase [Roseburia intestinalis XB6B4] Length = 2753 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 4/114 (3%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + T + + G++ +L G G N+Q + W + Sbjct: 2382 QVRFIHEATTDAQKKELFGKVRSGEVRVLLGSTPKMGAGTNVQDRLIAIHNLDCPWRPSD 2441 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Q RI Q V VY + + T D + Q + +K ++ + Sbjct: 2442 LEQRQGRIER----QGNMFPEVEVYRYVTEQTFDAYLYQLVESKQKFISQIMTS 2491 >gi|242051306|ref|XP_002463397.1| hypothetical protein SORBIDRAFT_02g043040 [Sorghum bicolor] gi|241926774|gb|EER99918.1| hypothetical protein SORBIDRAFT_02g043040 [Sorghum bicolor] Length = 1475 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 6/79 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N + +L +GLNL ++ + E ++R + G ++ Sbjct: 1325 NMKPVQVLLMLIQHGANGLNLLE-AQHVILVEPLLNPAA-----EAQAISRIHRVGQDKS 1378 Query: 165 VFVYYLIAQNTIDELVLQR 183 FV+ I + TI+E + + Sbjct: 1379 TFVHRFIVKKTIEESIYKL 1397 >gi|310792552|gb|EFQ28079.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001] Length = 1457 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 60/207 (28%), Gaps = 46/207 (22%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y F E + + + + +K ++ + + Sbjct: 1214 IYSHFSSEKLAQINDVELGSLSFGTKVDTL-----------------------VRHVLWL 1250 Query: 63 IEKANAAPIIVAYHFNSDLARLQ---KAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPAS 118 E A IV + S L L + G + P I + + + H + Sbjct: 1251 RESDPGAKSIVFTQYKSFLEILGAAFDRYKIGFSTIDRPNGITRFKEDPGVECFMLHGRA 1310 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GLNL + + + Q I R+ + G K V+ + + +++E Sbjct: 1311 NSSGLNLVN-ASHVFLCEPLLNTALELQAIARVD-----RIGQKNETTVWLYLIEGSVEE 1364 Query: 179 LVLQRLRTKSTIQDLLLNALKKETIHV 205 + ++K+ H+ Sbjct: 1365 SIYNL-------------SVKRRMEHM 1378 >gi|295099158|emb|CBK88247.1| DNA methylase [Eubacterium cylindroides T2-87] Length = 2848 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + G++ +L G G N+Q L W + Q Sbjct: 2482 FIHDANTEARKKELFSKVRSGQVRILMGSTQKMGAGTNVQDRLIALHDLDCPWRPSDLAQ 2541 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R+ Q V ++ + + T D + Q + K ++ + Sbjct: 2542 RLGRLVR----QGNQNPEVEIFRYVTEGTFDAYLYQLVENKQKFIAQIMTS 2588 >gi|225870148|ref|YP_002746095.1| helicase [Streptococcus equi subsp. equi 4047] gi|225699552|emb|CAW93149.1| putative helicase [Streptococcus equi subsp. equi 4047] Length = 2913 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G + +L G G N+Q L + W + +Q Sbjct: 2361 FIHEANSDKQKDELFAKVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2420 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2421 RAGRIVR----QGNENKEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2467 >gi|302676628|ref|XP_003027997.1| hypothetical protein SCHCODRAFT_78900 [Schizophyllum commune H4-8] gi|300101685|gb|EFI93094.1| hypothetical protein SCHCODRAFT_78900 [Schizophyllum commune H4-8] Length = 1442 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 10/148 (6%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPC 99 E + I+ L I A IV + L +++ +D+ Sbjct: 1201 CEGDYGHKIQTLIRHLLYIQLGEEGAKSIVFSAWADSLYILQNAMKENDIPCLRIDQADA 1260 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + I +L H GLN+ + + E + R + Sbjct: 1261 ANKFRTDPNIQVLLLHGERENAGLNVT-CASRVFLLE-----SVVHHGFEIQAIARIDRM 1314 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G +R V+ A++T+++ +L K Sbjct: 1315 GQQRPTEVFCYYAEDTVEKNILDLAAKK 1342 >gi|225378233|ref|ZP_03755454.1| hypothetical protein ROSEINA2194_03894 [Roseburia inulinivorans DSM 16841] gi|225209896|gb|EEG92250.1| hypothetical protein ROSEINA2194_03894 [Roseburia inulinivorans DSM 16841] Length = 2481 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + +E GK +L CG G+N+Q + W +Q Sbjct: 2101 FIHDAKTDAQRDALFKEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHVDCPWKPSSIEQ 2160 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V +Y + + T D + K ++ + Sbjct: 2161 REGRGIR----QGNKNDEVAIYRYVTKQTFDAYNWSLVENKQRFISQVMTS 2207 >gi|224139696|ref|XP_002323232.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222867862|gb|EEF04993.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 803 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%) Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + R Q G K V + LIA+N+I+E +L+ K + Sbjct: 741 AINRVHQYGQKENVRIVRLIAKNSIEERILEMQERKKAANEA 782 >gi|330956047|gb|EGH56307.1| SNF2-related:helicase [Pseudomonas syringae Cit 7] Length = 90 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G NL N + F L W R + G R V V +A++TID+ Sbjct: 4 AGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRLVVVKIPLAEDTIDQ 57 Query: 179 LVLQRLRTKSTIQDLLLNALKKE 201 + Q L K + L++ +E Sbjct: 58 QLWQMLMDKRALASDLIDPEAEE 80 >gi|229829842|ref|ZP_04455911.1| hypothetical protein GCWU000342_01948 [Shuttleworthia satelles DSM 14600] gi|229791140|gb|EEP27254.1| hypothetical protein GCWU000342_01948 [Shuttleworthia satelles DSM 14600] Length = 2869 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G + +L G G N+Q L + W + +Q Sbjct: 2375 FIHEANSDKQKDELFAKVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2434 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2435 RAGRIVR----QGNENKEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2481 >gi|158421592|ref|YP_001527819.1| helicase related protein [Deinococcus geothermalis DSM 11300] gi|158342835|gb|ABW35121.1| helicase related protein [Deinococcus geothermalis DSM 11300] Length = 1786 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 59/175 (33%), Gaps = 17/175 (9%) Query: 38 GAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA---------- 87 A + K++ + + ++ +A L++ Sbjct: 1555 HAAIGRVVNEHDPATNAKVQHVLNLAHARRGRGGVIFARNRRSIAMLKEQLEAQGHRVGV 1614 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 T D + ++ G + ++ + G NLQ+ G LV + L + +Q Sbjct: 1615 IDGSTTTDGKGKVRKAFDAGHVDIVLCS-DAGATGANLQHRGEWLVNYDLPLTQKTLEQR 1673 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 RI + G + V +++L+ D +QRL K + +L ++ Sbjct: 1674 NARID-----RLGQTKKVELHHLVTDTAYDRDNVQRLTRKREL-GSILQGEYRDM 1722 >gi|260438308|ref|ZP_05792124.1| conserved hypothetical protein [Butyrivibrio crossotus DSM 2876] gi|292809330|gb|EFF68535.1| conserved hypothetical protein [Butyrivibrio crossotus DSM 2876] Length = 2481 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + +E GK +L CG G+N+Q + W +Q Sbjct: 2101 FIHDAKTDAQRDALFKEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHVDCPWKPSSIEQ 2160 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V +Y + + T D + K ++ + Sbjct: 2161 REGRGIR----QGNKNDEVAIYRYVTKQTFDAYNWSLVENKQRFISQVMTS 2207 >gi|67539206|ref|XP_663377.1| hypothetical protein AN5773.2 [Aspergillus nidulans FGSC A4] gi|40743676|gb|EAA62866.1| hypothetical protein AN5773.2 [Aspergillus nidulans FGSC A4] Length = 2379 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 42/131 (32%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + + + E A IV + L ++ ++D+ + + I Sbjct: 2138 RHILWLREHDPGAQSIVFSQYKGFLDYLANAFRRFKIGYSSVDESDGIEKFKKDPGIECF 2197 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G R V+ + Sbjct: 2198 LLHAKAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRPTTVWMYLI 2251 Query: 173 QNTIDELVLQR 183 +T+++ + Sbjct: 2252 SDTVEKSIYDI 2262 >gi|283769151|ref|ZP_06342055.1| N-6 DNA Methylase [Bulleidia extructa W1219] gi|283104127|gb|EFC05506.1| N-6 DNA Methylase [Bulleidia extructa W1219] Length = 2908 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G + +L G G N+Q L + W + +Q Sbjct: 2356 FIHEANSDKQKDELFAKVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2415 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2416 RAGRIVR----QGNENKEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2462 >gi|195015254|ref|XP_001984167.1| GH15153 [Drosophila grimshawi] gi|193897649|gb|EDV96515.1| GH15153 [Drosophila grimshawi] Length = 1285 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 19/168 (11%), Positives = 50/168 (29%), Gaps = 22/168 (13%) Query: 49 KEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP---CTI 101 KI + ++ K + +++ + + L + A + I Sbjct: 1115 IGDFSTKIAYIVELVLKIKSGNDQEKVLIFSQWATILNYVAIALRHNGIEHRSKFTNRDI 1174 Query: 102 QEWNEGKIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 E+ + + + L + E + R + G Sbjct: 1175 DEFKDSALNVTCLLLPLARGAKGLNLIEATHVFLIEPILTPG-----EELQAIGRVHRFG 1229 Query: 161 FKRAVFVYYLIAQNTIDELVLQR---------LRTKSTIQDLLLNALK 199 + V+ I TI+E +++ L + + ++ L++L+ Sbjct: 1230 QTKPTTVHRFIVNGTIEENIMKLIKSADDKSTLSSHWDLDNMTLDSLR 1277 >gi|266619865|ref|ZP_06112800.1| superfamily II DNA and RNA helicase [Clostridium hathewayi DSM 13479] gi|288868574|gb|EFD00873.1| superfamily II DNA and RNA helicase [Clostridium hathewayi DSM 13479] Length = 1389 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + ++ G+I +L G G+N+Q L + W + Q Sbjct: 1022 FIHDYNTDIQRAELFEKVKTGEIRILIGSTEKMGAGMNVQDKLIALHHLDVPWRPADLTQ 1081 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 RI Q + ++ I + T D + Q L K ++ Sbjct: 1082 RNGRILR----QGNENEEISIFNYITEQTFDAYLWQILEQKQKYISQIM 1126 >gi|323448154|gb|EGB04056.1| hypothetical protein AURANDRAFT_33115 [Aureococcus anophagefferens] Length = 114 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 7/89 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + +LF G N L+ W+ + + + R ++ G R Sbjct: 22 DSDLRVLFLSKRCTEGIT--CVGANHLIELGPSWNP-----VTDVQALGRIQRFGQTRPC 74 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V ++ +I+EL+L R KS + +L+ Sbjct: 75 HVVRVVICGSIEELILLRQADKSGLVELV 103 >gi|237742424|ref|ZP_04572905.1| helicase [Fusobacterium sp. 4_1_13] gi|229430072|gb|EEO40284.1| helicase [Fusobacterium sp. 4_1_13] Length = 436 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + G+I +L G G N+Q L + W + +Q Sbjct: 76 FIHDANNEKQKDEMFSKVRSGEIRVLIGSTQKMGAGTNVQTKLIALHDLDVPWRPADLEQ 135 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V VY + +NT D + Q + K ++ + Sbjct: 136 RAGRIVR----QGNENKNVEVYRYVTENTFDAYLWQTIENKQKFISQIMTS 182 >gi|118575361|ref|YP_875104.1| superfamily II DNA/RNA helicase, SNF2 family [Cenarchaeum symbiosum A] gi|118193882|gb|ABK76800.1| superfamily II DNA/RNA helicase, SNF2 family [Cenarchaeum symbiosum A] Length = 1016 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 60/148 (40%), Gaps = 14/148 (9%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 K + I+ + + + G ++ + + K ++ A Sbjct: 400 KDHPGKKILVFTESKDTLDYLMGKMEKWGYLANTIHGGMGLEERVEAERVFKNKTDVMVA 459 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 A+ G+NLQ+ ++++ + L W+ +Q + R+ + G + V V+ LIA N Sbjct: 460 TEAAG-EGINLQF-CHLMINYDLPWNPNRLEQRMGRV-----HRYGQQYPVTVFNLIASN 512 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 T + + ++L + L ++K++ Sbjct: 513 TREGEIFKKLFER-------LESIKRDV 533 >gi|147860973|emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera] Length = 2416 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 10/105 (9%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + A G+T + P E+ + +L +GLNL +V Sbjct: 2251 HFRRQRTSAEGNGQTHAQQPEPEPEF----VQVLLLLIQHGANGLNLLE-AQHVVLVEPL 2305 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + E ++R + G + V+ I ++T++E + + Sbjct: 2306 LNPAA-----EAQAISRVHRIGQENRTLVHRFIVKDTVEESIYKL 2345 >gi|78183618|ref|YP_376052.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9902] gi|78167912|gb|ABB25009.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9902] Length = 531 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 33/198 (16%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVA 74 GE + Q+A K+ A E ++ + +++ Sbjct: 345 GEVRSDAEPLAVLTAMRQIAAEF---------------KLSAAEQLLYQLHQQGHAVVLF 389 Query: 75 YHFNSDLARLQKA-----FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 F + L L + + + ++ + +GK L A + G L Sbjct: 390 SAFVAPLQLLHQRIGGELMTGRQRPLERQQSVDRFQQGKSNCLLATYGTGSLGFTLHR-A 448 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 +V W + +Q +R ++L D+LV L +K+ Sbjct: 449 RHVVLLERPWTPGDLEQAEDRCHRLGMGDGL-----TCHWLQL-GPADQLVDGLLASKAE 502 Query: 190 IQDLLL----NALKKETI 203 ++LL +L+++++ Sbjct: 503 RIEVLLGPRRQSLERQSL 520 >gi|50548151|ref|XP_501545.1| YALI0C07150p [Yarrowia lipolytica] gi|49647412|emb|CAG81848.1| YALI0C07150p [Yarrowia lipolytica] Length = 1756 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 7/137 (5%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPL 111 D IK ++++ +A I++ + L L A + + +P T+ + ++ Sbjct: 1578 DHVIKYIKMLTHRAPGTQIVIFSQWAEILTLLASALTENKIAYAEPKTLMSFLQSEEVTC 1637 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + GL L ++ + E ++R + G + V Sbjct: 1638 FLLNAKFQSTGLTLVN-ATHVILCEPILNAAL-----EAQAISRIHRMGQTQTTHVTIFT 1691 Query: 172 AQNTIDELVLQRLRTKS 188 +T++E VL+ K Sbjct: 1692 MADTVEEEVLRLAINKR 1708 >gi|291166691|gb|EFE28737.1| superfamily II DNA and RNA helicase [Filifactor alocis ATCC 35896] Length = 2944 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G + +L G G N+Q L + W + +Q Sbjct: 2392 FIHEANSDKQKDELFAKVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2451 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2452 RAGRIVR----QGNENKEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2498 >gi|83956079|ref|ZP_00964561.1| hypothetical protein NAS141_02761 [Sulfitobacter sp. NAS-14.1] gi|83839645|gb|EAP78824.1| hypothetical protein NAS141_02761 [Sulfitobacter sp. NAS-14.1] Length = 972 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 23/151 (15%) Query: 67 NAAPIIVAYHFNSDLARLQKA----------------FPQGRTLDKDPCTIQEWNEGKIP 110 N +IV + L L+K F ++ +N Sbjct: 426 NQRRVIVFSEYRDTLDWLRKQLLEELSLSPEDDRIAEFHGSTQPNERERIKARFNADPDQ 485 Query: 111 L---LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G+NLQ+ L F L W+ +Q RI + +F Sbjct: 486 EPLRILLCTDAAREGINLQHRCYDLFHFDLPWNPSRLEQRNGRIDR----RLQPAPEIFC 541 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Y +N + +LQ L K+ + L + Sbjct: 542 RYFTYKNRSSDRILQALFKKTERINSELGEV 572 >gi|158317173|ref|YP_001509681.1| helicase domain-containing protein [Frankia sp. EAN1pec] gi|158112578|gb|ABW14775.1| helicase domain protein [Frankia sp. EAN1pec] Length = 1046 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 7/114 (6%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G + + ++ P+ L G+NL + LV + W L +Q Sbjct: 485 MHGGLPDVEQERIVDDFKTTASPVRLLITGDVASEGVNLHAQCHHLVHVDIPWSLIRIEQ 544 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQN---TIDELVLQRLRTKSTIQDLLLNA 197 RI Q+ A+ L+ + + D VLQRL K + L Sbjct: 545 RNGRIDRYGQKHPPQIAALA---LVPSDDRFSGDVRVLQRLLAKEHLAHTTLGD 595 >gi|67539812|ref|XP_663680.1| hypothetical protein AN6076.2 [Aspergillus nidulans FGSC A4] gi|40738861|gb|EAA58051.1| hypothetical protein AN6076.2 [Aspergillus nidulans FGSC A4] gi|259479739|tpe|CBF70236.1| TPA: SNF2 family helicase, putative (AFU_orthologue; AFUA_2G09120) [Aspergillus nidulans FGSC A4] Length = 2379 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 4/100 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 T K I+++ + G +L + + N ++F S + + Sbjct: 2238 HIIITPTDQKTSSKIEKFQKEGFGDTKVLILNLGNEMAAGLNLQCANHVIFLSPFLAETQ 2297 Query: 144 H-QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + V R R+ G R V +Y+L+A+ TID V Q Sbjct: 2298 YDYDSVMIQAVGRSRRYGQTRHVHIYHLLAKMTIDVNVFQ 2337 >gi|254516162|ref|ZP_05128222.1| Type III restriction enzyme, res subunit family [gamma proteobacterium NOR5-3] gi|219675884|gb|EED32250.1| Type III restriction enzyme, res subunit family [gamma proteobacterium NOR5-3] Length = 961 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 9/108 (8%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +DK I + + +L A + G+NLQ+ ++++ + L W+ + +Q I R Sbjct: 489 SPAVDKRTALIDRFRDDA-EVLIAT-EAAAEGVNLQF-CSLVINYDLPWNPQRVEQRIGR 545 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V + + N D VL+ L K + D L A Sbjct: 546 C-----HRYGQRFDVVVINFLNKRNDADRRVLELLSEKFHLFDGLFGA 588 >gi|299471940|emb|CBN79620.1| harp (smarcal1)-related [Ectocarpus siliculosus] Length = 1197 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 8/108 (7%) Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K + + + ++ + G G+ L + VF L+W Q + Sbjct: 821 STAQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTA-ASCAVFAELYWTPGSMAQAED 879 Query: 150 RIGVTRQRQAGFK-RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 RI + G K + V + YL+ + T+D+ V+ + K T + Sbjct: 880 RI-----HRIGQKAKTVLIRYLVGRGTMDDGVISTIHRKQTTLRSTVG 922 >gi|154500303|ref|ZP_02038341.1| hypothetical protein BACCAP_03970 [Bacteroides capillosus ATCC 29799] gi|150271035|gb|EDM98309.1| hypothetical protein BACCAP_03970 [Bacteroides capillosus ATCC 29799] Length = 1182 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 65/193 (33%), Gaps = 22/193 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + +++ ++ T LA + E + E + + + Sbjct: 632 EQIWDDPDFEIEDSGMDDKEV---TGTLQSLAADILKLAEVLPEDDPKFEAMLRVIEEKQ 688 Query: 65 KANAAPIIVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQ--EWNEGKIPL-- 111 + +I+ F LA L++ G D+D ++ + P Sbjct: 689 AESNNKVIIFSSFKHTLAYLRRKLESQGLRVSQIDGSVRDEDRVLLRDRFKQDRDCPEAL 748 Query: 112 -LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + GL+ Q+ ++++ + L W+ +Q I RI + V +Y + Sbjct: 749 DILLFTEVGCEGLDYQF-CDMMINYDLPWNPMRIEQRIGRIDR----RGQKSEVVNIYNM 803 Query: 171 IAQNTIDELVLQR 183 I TID + R Sbjct: 804 ITSGTIDADIYSR 816 >gi|301755790|ref|XP_002913754.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1-like [Ailuropoda melanoleuca] Length = 959 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 10/126 (7%) Query: 69 APIIVAYHFNSDLARLQKAFPQ---GRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLN 124 +V +L R + + Q++ + + + GL Sbjct: 738 HHKVVLSAITRELERKHVPHIRIDGSTSSADREDLCQQFQLFEKHAVAVLSITAANMGLT 797 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 +++VF L+W+ R + G +V ++YL+A+ T D+ + + Sbjct: 798 F-SSADLVVFAELFWNPGVLL-----QAEDRVHRIGQASSVSIHYLVARGTADDYLWPLI 851 Query: 185 RTKSTI 190 + K + Sbjct: 852 QEKIKV 857 >gi|281340244|gb|EFB15828.1| hypothetical protein PANDA_001570 [Ailuropoda melanoleuca] Length = 957 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 10/126 (7%) Query: 69 APIIVAYHFNSDLARLQKAFPQ---GRTLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLN 124 +V +L R + + Q++ + + + GL Sbjct: 736 HHKVVLSAITRELERKHVPHIRIDGSTSSADREDLCQQFQLFEKHAVAVLSITAANMGLT 795 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 +++VF L+W+ R + G +V ++YL+A+ T D+ + + Sbjct: 796 F-SSADLVVFAELFWNPGVLL-----QAEDRVHRIGQASSVSIHYLVARGTADDYLWPLI 849 Query: 185 RTKSTI 190 + K + Sbjct: 850 QEKIKV 855 >gi|229829879|ref|ZP_04455948.1| hypothetical protein GCWU000342_01985 [Shuttleworthia satelles DSM 14600] gi|229791177|gb|EEP27291.1| hypothetical protein GCWU000342_01985 [Shuttleworthia satelles DSM 14600] Length = 2913 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G + +L G G N+Q L + W + +Q Sbjct: 2361 FIHEANSDKQKDELFAKVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2420 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2421 RAGRIVR----QGNENKEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2467 >gi|170109825|ref|XP_001886119.1| predicted protein [Laccaria bicolor S238N-H82] gi|164639049|gb|EDR03323.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1192 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 6/90 (6%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + + GLNL + ++F Q +E + Sbjct: 999 QFREQLVLTFETSPTYRVFLMELKHGARGLNL-ISASRVIFCEP-----VWQADVESQAI 1052 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 R + G R + V L + T +E ++ R Sbjct: 1053 KRAHRIGQTRPITVKTLAIRGTAEENMVAR 1082 >gi|115443362|ref|XP_001218488.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188357|gb|EAU30057.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 2106 Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 8/107 (7%) Query: 87 AFPQGRTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 T ++++ + G +L S N ++F S L + Sbjct: 1966 HIAISATDRTSAQKVEQFQKTSFGDNKVLILTLGSEMAAGLNVQCANHVIFLSP--MLAQ 2023 Query: 144 HQQMIE---RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 Q + + R R+ G + V +Y+L+A+ TID + Q R+K Sbjct: 2024 TQYDYDSAMTQAIGRCRRYGQNKHVHIYHLLAKRTIDVNIFQERRSK 2070 >gi|323456692|gb|EGB12558.1| hypothetical protein AURANDRAFT_17580 [Aureococcus anophagefferens] Length = 68 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 29/74 (39%), Gaps = 6/74 (8%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + + G+NL N V ++ +R + R + G +R V Sbjct: 1 PPTTIFLLSIRAGACGINLTQ-ANHCVMVEPCTNVAL-----DRQAIGRVHRMGQQRDVT 54 Query: 167 VYYLIAQNTIDELV 180 ++ L+ +++++ + Sbjct: 55 IHRLVLRDSVESRM 68 >gi|312127367|ref|YP_003992241.1| helicase domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777386|gb|ADQ06872.1| helicase domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 889 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 10/118 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + +GKI L+ + GLNLQ G ++ L W+ +Q RI Sbjct: 730 YSKVERDEIKELVLDGKIKLMIGT-DAAAEGLNLQTLGALIN-VDLPWNPIRLEQRQGRI 787 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL----KKETIHV 205 Q V+VY L +++I++ + L + + ++ +L K E + + Sbjct: 788 RRIGQ----QFDKVYVYNLRYKDSIEDRIHAVLSGRIKLTYDMIGSLPEIIKDEWMEI 841 >gi|195127015|ref|XP_002007964.1| GI12091 [Drosophila mojavensis] gi|193919573|gb|EDW18440.1| GI12091 [Drosophila mojavensis] Length = 1284 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 49/165 (29%), Gaps = 18/165 (10%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVII-------EKANAAPIIVAYHFNSDLARLQK 86 QL KI + ++ N I++ + + L + Sbjct: 1095 QLYYSVRKGVNSSEVVGDFSTKITYIVDLVLKIKSESSDKNQEKILIFSQWPTILNHIAS 1154 Query: 87 AFPQGRTLDKDP---CTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 A Q + I E+ + + L A GLNL + Sbjct: 1155 ALSQNSIEYRSKFTNRDIDEFKDADRNVTCLLMPIARGSKGLNL-IEATHVFLVEPILTP 1213 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 E + R + G + V+ I TI+E +++ +++ Sbjct: 1214 G-----EELQAIGRVHRFGQTKPTTVHRFIVNGTIEENIMKLIKS 1253 >gi|154278960|ref|XP_001540293.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150412236|gb|EDN07623.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1538 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFN---SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + L + + A IV + L R F G + ++ + + + Sbjct: 1165 RHLIWLRQHDPGAKSIVFSQYKPFLGILGRAFSHFKIGYSSIDSSDGVERFKTDPSVECF 1224 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G K+ V+ + Sbjct: 1225 LLHAKAHSSGLNL-INATHVFLCEPLINTA-----IELQAIARVHRIGQKQETTVWMYLV 1278 Query: 173 QNTIDELVLQR 183 ++++E + Sbjct: 1279 SDSVEESIYDI 1289 >gi|300114480|ref|YP_003761055.1| SNF2-like protein [Nitrosococcus watsonii C-113] gi|299540417|gb|ADJ28734.1| SNF2-related protein [Nitrosococcus watsonii C-113] Length = 1145 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 69/226 (30%), Gaps = 42/226 (18%) Query: 6 KFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEK 55 +F+ ++ + ++ + + K ++ K Sbjct: 757 QFESYNTILMRASSSDSNAALAALQKLRDVSLHPRLVFGGGLDTPRPLADLVNLTDESGK 816 Query: 56 IKALEVIIEK--ANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTL 94 I++L I+++ I+ S + KA + Sbjct: 817 IRSLLPILDQIRDRGEKCIIFVINKKLQAFLALTLAKIYLLPPVSVINGDAKAVAKRAAS 876 Query: 95 DKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 I+ + E ++ P + G GL G N ++ W+ + E Sbjct: 877 PTRQSMIRAFEERDGFNVIIMSPIAAGVGLT-VVGANNVIHLERHWNPAK-----EAQAT 930 Query: 154 TRQRQAGFKRAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 R + G KR V V+ + + + D + Q L K ++D ++ Sbjct: 931 DRVYRIGQKRKVNVFIPLIHHPEYQSFDVNLHQLLSRKGQLKDAVV 976 >gi|291166232|gb|EFE28278.1| helicase [Filifactor alocis ATCC 35896] Length = 3918 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + +G++ +L CG G N Q + + W + Q Sbjct: 3336 FIHIAKNNKEKDAIFDKVRKGEVRVLLGSTGKCGAGTNCQDKLIAIHDLDIPWRPADLSQ 3395 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ I +NT D + Q L K ++ + Sbjct: 3396 RAGRIVR----QGNENSDVRIFRYITENTFDAYLFQTLENKQKYISQIMTS 3442 >gi|301115138|ref|XP_002905298.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262110087|gb|EEY68139.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 855 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 46/106 (43%), Gaps = 6/106 (5%) Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + ++ G I +L + + G+NLQ +++ + + + +E+ + R + G Sbjct: 629 VSSFHSGDIQVLILNSLTSASGINLQVASHLIFLDPVGYSPMQA-NTLEQQAIGRVLRMG 687 Query: 161 FKRA-VFVYYLIAQNTID----ELVLQRLRTKSTIQDLLLNALKKE 201 V V LIA++T++ + + + + D + +++ Sbjct: 688 QTNDLVTVVRLIAEDTVEATLYDDIHEATQKTIAADDSFFDGERED 733 >gi|224127900|ref|XP_002329205.1| hypothetical protein POPTRDRAFT_266879 [Populus trichocarpa] gi|222870986|gb|EEF08117.1| hypothetical protein POPTRDRAFT_266879 [Populus trichocarpa] Length = 166 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 6/82 (7%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 Q+ I +L +GLNL +V + E V+R + G Sbjct: 23 QQQETKSIQVLLLLIQHGANGLNLLE-AQHVVLVEPLLNPAA-----EAQAVSRVHRIGQ 76 Query: 162 KRAVFVYYLIAQNTIDELVLQR 183 ++ V+ I ++T++E + + Sbjct: 77 EQRTLVHRFIVKDTVEESIYKL 98 >gi|291563865|emb|CBL42681.1| hypothetical protein CK3_32610 [butyrate-producing bacterium SS3/4] Length = 416 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + G++ L A G G N+Q L + W + +Q Sbjct: 12 FIHDANTELRKAELFAKVRSGQVRFLLGSTAKMGAGTNVQDRLIALHHLDVPWRPSDIEQ 71 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + + T D Q + K ++ + Sbjct: 72 QEGRILR----QGNQNDKVKIFRYVTEGTFDSYSWQLIENKQKFIGQIMTS 118 >gi|114583218|ref|XP_001152878.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 isoform 2 [Pan troglodytes] Length = 556 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 8/133 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWN-EGKIPLLFAHPA 117 E + A+ ++ A + +Q G T + Q++ + + Sbjct: 328 EKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSIT 387 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GL +++VF L+W+ R + G +V ++YL+A+ T D Sbjct: 388 AANMGLTF-SSADLVVFAELFWNPGVLI-----QAEDRVHRIGQTSSVGIHYLVAKGTAD 441 Query: 178 ELVLQRLRTKSTI 190 + + ++ K + Sbjct: 442 DYLWPLIQEKIKV 454 >gi|67591480|ref|XP_665565.1| DNA repair protein rhp16 [Cryptosporidium hominis TU502] gi|54656315|gb|EAL35335.1| DNA repair protein rhp16 [Cryptosporidium hominis] Length = 1236 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 45/148 (30%), Gaps = 21/148 (14%) Query: 40 VYYDEEKHWKEVHDEKIKALEV----IIEKANAAPIIVAYHFNSDLARLQK--------- 86 + K KI L ++++ + IV F + L + Sbjct: 1095 FITRQIKTQGFESSTKIDTLLEEVNKMMQEDPESKGIVFSQFTNMLDLVSYRLKKANIGC 1154 Query: 87 -AFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 ++ + + +N+ + ++ + G GLNLQ N + WW+ Sbjct: 1155 VMLAGSMSILQRNSILYSFNKFPDLKIILISLKAGGEGLNLQ-VANYVFLLDPWWNPAAE 1213 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIA 172 R + G K+ V I Sbjct: 1214 L-----QAFQRAHRIGQKKKVTALRFIT 1236 >gi|145604058|ref|XP_360412.2| hypothetical protein MGG_11047 [Magnaporthe oryzae 70-15] gi|145012150|gb|EDJ96806.1| hypothetical protein MGG_11047 [Magnaporthe oryzae 70-15] Length = 873 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 11/99 (11%), Positives = 28/99 (28%), Gaps = 14/99 (14%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + +L ++ G + W+ E+ Sbjct: 748 PKKRSNILLNFQTRQACTVLLITFSTGAVG---------VHILEPQWNPAA-----EKQA 793 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + R + R V + + +I++ V +R K + Sbjct: 794 IGRLLRLDQSRKVTIVRYAMEKSIEQAVQKRQLRKFQLA 832 >gi|320581003|gb|EFW95225.1| Putative helicase [Pichia angusta DL-1] Length = 1498 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 23/189 (12%), Positives = 63/189 (33%), Gaps = 11/189 (5%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + ++ ++ + + Q+ E + + + Sbjct: 1251 RLYQSLDPTMLKEISSIELKKNYGSKVDMIVRQII---YLKQMEPDVQILVYSQWTDFLK 1307 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + +A I +SD+ + +GR+ + + +I + + Sbjct: 1308 FLGRALRQNGISFLS-SSDVTHGEPNTKKGRSTFGSKEIDKFKRDPRITCFLLNAKAQAA 1366 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GL L + + +L +E ++R + G + V+ + +N+++E + Sbjct: 1367 GLTLTN-ASHVFLCEPLVNL-----PLELQAISRIHRIGQSQETKVWNFVIENSVEESI- 1419 Query: 182 QRLRTKSTI 190 L TK + Sbjct: 1420 AILSTKKRM 1428 >gi|307261168|ref|ZP_07542844.1| hypothetical protein appser12_7310 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869150|gb|EFN00951.1| hypothetical protein appser12_7310 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 957 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 DK I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 495 DKRSALIEHFKE-KAQIMIAT-EAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC--- 548 Query: 155 RQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ VL+ L K + +L A Sbjct: 549 --HRYGQKFDVVVINFLNKRNLADQRVLELLTEKFKLFQGVLGA 590 >gi|116071773|ref|ZP_01469041.1| DEAD/DEAH box helicase-like protein [Synechococcus sp. BL107] gi|116065396|gb|EAU71154.1| DEAD/DEAH box helicase-like protein [Synechococcus sp. BL107] Length = 538 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 33/198 (16%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVA 74 GE + Q+A K+ A E ++ + +++ Sbjct: 352 GEVRSDAEPLAVLTAMRQIAAEF---------------KLSAAEQLLYQLHQQGHAVVLF 396 Query: 75 YHFNSDLARLQKA-----FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 F + L L + + + ++ + +GK L A + G L Sbjct: 397 SAFIAPLQLLHQRIGGELMTGRQRPLERQQSVDRFQQGKSNCLLATYGTGSLGFTLHR-A 455 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 +V W + +Q +R ++L D+LV L +K+ Sbjct: 456 RHVVLLERPWTPGDLEQAEDRCHRLGMGDGL-----TCHWLQL-GPADQLVDGLLASKAE 509 Query: 190 IQDLLL----NALKKETI 203 ++LL +L+++++ Sbjct: 510 RIEVLLGPRRQSLERQSL 527 >gi|330929262|ref|XP_003302572.1| hypothetical protein PTT_14447 [Pyrenophora teres f. teres 0-1] gi|311321978|gb|EFQ89337.1| hypothetical protein PTT_14447 [Pyrenophora teres f. teres 0-1] Length = 1529 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 8/130 (6%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK---AFPQGRTLDKDPCTIQEWNEGKIPLLF 113 + L I + A ++ F LA L+ + G + D I+++ + Sbjct: 1259 RHLIWIRKNDPGAKSVIFSQFGDFLAVLRNALDKWKIGASSIADKDGIRKFKTDQSVECL 1318 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 A + + IE + R + G +R V+ + Sbjct: 1319 LLDAKTDSSGLTLVNATYVFLCEPLINPA-----IELQAINRVHRIGQQRPTTVFMYLIS 1373 Query: 174 NTIDELVLQR 183 +T++E + Sbjct: 1374 DTVEEAIYDI 1383 >gi|297827713|ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297327578|gb|EFH57998.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1635 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 6/93 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K+ + E I +L +GLNL ++ + E V Sbjct: 1469 EKETQKTNQKEENPIQVLLLLVQHGANGLNLLE-AQHVILVEPLLNPAA-----EAQAVG 1522 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R + G ++ V+ + T++E + + R K Sbjct: 1523 RVHRIGQEKPTLVHRFLVTGTVEESIYKLNRNK 1555 >gi|167855922|ref|ZP_02478671.1| hypothetical ATP-dependent helicase [Haemophilus parasuis 29755] gi|167852959|gb|EDS24224.1| hypothetical ATP-dependent helicase [Haemophilus parasuis 29755] Length = 950 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 25/164 (15%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 +ANG H + + E + N A I Sbjct: 444 IANGYANQVVSFSGANHHTDAKRVYEQWLADENNAGRITGSPQVDM-------------- 489 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 I + ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 490 --RTALIDHFKN-NAQIMIAT-EAAAEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC--- 541 Query: 155 RQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + +N D+ VL+ L K + D + A Sbjct: 542 --HRYGQKFDVVVINFLNQRNEADQRVLELLSEKFKLFDGVFGA 583 >gi|300779250|ref|ZP_07089108.1| SNF2 family helicase [Chryseobacterium gleum ATCC 35910] gi|300504760|gb|EFK35900.1| SNF2 family helicase [Chryseobacterium gleum ATCC 35910] Length = 1702 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++N GKI ++ A G+NLQ L SL ++ +Q+ R Sbjct: 1400 RLKIQDDFNSGKIKIIIGSEAI-QEGMNLQENTTDLYMLSLPYNFTTLRQVEGRAWR--- 1455 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q V + +++ ++ID +LQ+L++K Q L A+KK Sbjct: 1456 -QGNKFENVRINFMLTNDSIDVFMLQKLQSK---QARYLEAMKK 1495 >gi|222529584|ref|YP_002573466.1| helicase domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222456431|gb|ACM60693.1| helicase domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 889 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 10/118 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + +GKI L+ + GLNLQ G ++ L W+ +Q RI Sbjct: 730 YSKVERDEIKELVLDGKIKLMIGT-DAAAEGLNLQTLGALIN-VDLPWNPIRLEQRQGRI 787 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL----KKETIHV 205 Q V+VY L +++I++ + L + + ++ +L K E + + Sbjct: 788 RRIGQ----QFDKVYVYNLRYKDSIEDRIHAVLSGRIKLTYDMIGSLPEIIKDEWMEI 841 >gi|190150014|ref|YP_001968539.1| ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189915145|gb|ACE61397.1| hypothetical ATP-dependent helicase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 957 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 DK I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 495 DKRSALIEHFKE-KAQIMIAT-EAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC--- 548 Query: 155 RQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ VL+ L K + +L A Sbjct: 549 --HRYGQKFDVVVINFLNKRNLADQRVLELLTEKFKLFQGVLGA 590 >gi|238925906|ref|YP_002939424.1| possible adenine-specific DNA methylase [Eubacterium rectale ATCC 33656] gi|238877583|gb|ACR77290.1| possible adenine-specific DNA methylase [Eubacterium rectale ATCC 33656] Length = 2560 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G++ L A G G N+Q L + W + +Q Sbjct: 2166 FIHDANTEAKKTELFGKVKSGQVRFLIGSTAKMGAGTNVQDRLIALHHLDIGWKPSDLEQ 2225 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V ++ + ++T D + Q + K ++ + Sbjct: 2226 REGRIIR----QGNHNKKVHIFRYVTESTFDSYMWQLIENKQKFISQIMTS 2272 >gi|46126071|ref|XP_387589.1| hypothetical protein FG07413.1 [Gibberella zeae PH-1] Length = 1422 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 10/149 (6%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK---AFPQGRTLDKDPCT 100 + + D +K L + E A IV + L L+ F G D Sbjct: 1203 DGPSFTTKVDTLVKHLMWLRESDPGAKSIVFSQYKGFLEILRNAFARFGIGHVSIDDSGG 1262 Query: 101 IQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 I+ + + + H + GLNL + + + Q I R+ + Sbjct: 1263 IRRFKEDASVECFLLHARAHSSGLNLVN-ASHVFLCEPLLNTALELQAIARVD-----RI 1316 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 G V+ + T++E + + Sbjct: 1317 GQTHETTVWLYLVSGTVEESIYNLSVQRR 1345 >gi|239827429|ref|YP_002950053.1| SNF2-related protein [Geobacillus sp. WCH70] gi|239807722|gb|ACS24787.1| SNF2-related protein [Geobacillus sp. WCH70] Length = 964 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + E K ++ A S G+NLQ+ +++V + L W+ + +Q I R Sbjct: 499 RAALVEHFRE-KAEIMIAT-ESAAEGVNLQF-CSLVVNYDLPWNPQRIEQRIGRC----- 550 Query: 157 RQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + +N D+ V + L K + +L A Sbjct: 551 HRYGQKHDVVVINFLNQRNEADQRVYELLEQKFNLFTGVLGA 592 >gi|323136362|ref|ZP_08071444.1| hypothetical protein Met49242DRAFT_0831 [Methylocystis sp. ATCC 49242] gi|322398436|gb|EFY00956.1| hypothetical protein Met49242DRAFT_0831 [Methylocystis sp. ATCC 49242] Length = 459 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 69/216 (31%), Gaps = 28/216 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE---EKHWKEVHDEKIKA 58 + Y + E +L+ ++ ++C Q+ Y+ + ++ E+ Sbjct: 240 RLYDTLKDEAILELERFFVDGTLPGVAFIRCRQILEHPNYFPDLTMPGTTVDIIPERRPG 299 Query: 59 LEVII------EKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPCTIQ 102 ++ AN P++V + + + + + Sbjct: 300 KLELLDLHFENHAANKQPLVVFASLIPQERQILELSREHGLRFEILNGEVSHAESSQISK 359 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGG----NILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + G + L P G N Q+ G + ++ SL + Q R + Sbjct: 360 AFETGALDGLVCSPLVADAGFNWQFSGGKEVSHAIYASLDFRDTSFVQSYGRF-----LR 414 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + A+ + L +N++D+ + + KS + Sbjct: 415 GKRESALRLTILKYRNSLDDRIAYLVNKKSRDAQKV 450 >gi|170027903|ref|XP_001841836.1| DNA repair protein RAD16 [Culex quinquefasciatus] gi|167868306|gb|EDS31689.1| DNA repair protein RAD16 [Culex quinquefasciatus] Length = 1276 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 13/137 (9%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT-----IQEWNEGK-- 108 ++ + + II+ H++ L L +A + I+E+ + Sbjct: 1112 VETVLKLKLDEPDVKIIIFSHWDPILFYLAQALDTNSVTYRLKSAKFYKHIEEFKDYTNG 1171 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I L + GLNL + + E V R + G + FV+ Sbjct: 1172 ITCLLLPLKAGSKGLNLTE-ATHVFLVEPILNPGEEL-----QAVGRVHRIGQTKPTFVH 1225 Query: 169 YLIAQNTIDELVLQRLR 185 I QNTI+E + + ++ Sbjct: 1226 RFIVQNTIEETIHRTVQ 1242 >gi|255088523|ref|XP_002506184.1| SNF2 super family [Micromonas sp. RCC299] gi|226521455|gb|ACO67442.1| SNF2 super family [Micromonas sp. RCC299] Length = 1741 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 6/84 (7%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ +L H S GL L +++V + + E R + Sbjct: 1567 AIARFRDDPATQVLLLHAGSAAAGLTLTQ-ADLVVLLEPFLSPGD-----EAQAANRVHR 1620 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQ 182 G R V + T++E +L Sbjct: 1621 IGQTRPVRCVTYFVEGTVEERLLA 1644 >gi|281419823|ref|ZP_06250822.1| helicase [Prevotella copri DSM 18205] gi|281406123|gb|EFB36803.1| helicase [Prevotella copri DSM 18205] Length = 966 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 9/111 (8%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 F + +K + + + + ++ A + G+NLQ+ +++V + L W+ + +Q Sbjct: 490 FTPSLSANKRQAIVDYFRD-EAEIMIAT-EAASEGINLQF-CSLIVNYDLPWNPQRVEQR 546 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 I R + G K V V+ I + N D V Q L K + D + + Sbjct: 547 IGRC-----HRYGQKNDVVVFNFINKANAADVRVFQLLSEKFHLFDGVFGS 592 >gi|310824775|ref|YP_003957133.1| ATP-dependent RNA helicase [Stigmatella aurantiaca DW4/3-1] gi|309397847|gb|ADO75306.1| ATP-dependent RNA helicase [Stigmatella aurantiaca DW4/3-1] Length = 1010 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 13/125 (10%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + L + + + + + P + G G N Q+ + LV + L W +Q Sbjct: 539 YHGDLPLVERDRQVARFRDPEGPQVLLCTEVGGEGRNFQF-AHHLVHYDLPWSPATVEQR 597 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ-------DLLLNALKK 200 I R+ + G + V ++ T+ VL L + D +L ++ Sbjct: 598 IGRLD-----RIGQSKPVEIHVFDPAGTLASDVLMLLADAVGVFGETVGGLDAVLEEVED 652 Query: 201 ETIHV 205 + Sbjct: 653 RLAEL 657 >gi|115377394|ref|ZP_01464599.1| type III restriction enzyme, res subunit family [Stigmatella aurantiaca DW4/3-1] gi|115365605|gb|EAU64635.1| type III restriction enzyme, res subunit family [Stigmatella aurantiaca DW4/3-1] Length = 1102 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 13/125 (10%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + L + + + + + P + G G N Q+ + LV + L W +Q Sbjct: 631 YHGDLPLVERDRQVARFRDPEGPQVLLCTEVGGEGRNFQF-AHHLVHYDLPWSPATVEQR 689 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ-------DLLLNALKK 200 I R+ + G + V ++ T+ VL L + D +L ++ Sbjct: 690 IGRLD-----RIGQSKPVEIHVFDPAGTLASDVLMLLADAVGVFGETVGGLDAVLEEVED 744 Query: 201 ETIHV 205 + Sbjct: 745 RLAEL 749 >gi|321264055|ref|XP_003196745.1| DNA repair protein rad8 [Cryptococcus gattii WM276] gi|317463222|gb|ADV24958.1| DNA repair protein rad8, putative [Cryptococcus gattii WM276] Length = 1919 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 8/101 (7%) Query: 97 DPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM-IERIG 152 T+ + N +L + N +F + +E Sbjct: 1745 RANTLDRFQSTNAATARVLLLKMNDASAAGSNLTTANHAIFLGPLFTNSLFNYRAVETQA 1804 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQR----LRTKST 189 + R R+ G ++ V ++ L+A +TID + LR K+ Sbjct: 1805 IGRVRRYGQQKKVHIHRLLALDTIDMTIFNTRRAELREKTD 1845 >gi|323451563|gb|EGB07440.1| hypothetical protein AURANDRAFT_27712 [Aureococcus anophagefferens] Length = 205 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 6/97 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + ++ G +L A S G GLN+ +VF W++ + H+Q ++R Sbjct: 19 DERGAVLDDFRAGGADVLLATVHSGGTGLNITR-ATTVVFTDRWFNPQVHEQAVDRC--- 74 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + G + V + A TID+ + K Sbjct: 75 --HRIGQTKPVAAAFYDAALTIDDCMRHVNDIKLDNA 109 >gi|257451832|ref|ZP_05617131.1| helicase [Fusobacterium sp. 3_1_5R] gi|317058387|ref|ZP_07922872.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] gi|313684063|gb|EFS20898.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R] Length = 2244 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + G+I +L G G N+Q L + W + +Q Sbjct: 1864 FIHDANNEKQKEELFAKVRSGEIRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 1923 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY I + T D + Q + K ++ + Sbjct: 1924 RAGRIVR----QGNENEKVEVYRYITEGTFDAYLWQTIENKQKFISQIMTS 1970 >gi|76802571|ref|YP_327579.1| ATP-dependent helicase [Natronomonas pharaonis DSM 2160] gi|76558436|emb|CAI50027.1| ATP-dependent helicase [Natronomonas pharaonis DSM 2160] Length = 958 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 19/130 (14%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + +E+ + +L A G+NLQ+ N ++ + L W+ +Q Sbjct: 537 HGSLNEAQRKERFKEFEDSTRGVLIAT-DVISEGMNLQHAANQIIHYELPWNPNRLEQRN 595 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI--------------QDLL 194 RI Q+ V + ++ ++ +D +L++L K+ + + Sbjct: 596 GRIDRYGQK----NDEVVIRTMVVEDQMDVAILEKLVQKANNIRQEYGFSPPYFGDDEGI 651 Query: 195 LNALKKETIH 204 L LK E I Sbjct: 652 LELLKDEGID 661 >gi|307256725|ref|ZP_07538504.1| hypothetical protein appser10_7280 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864773|gb|EFM96677.1| hypothetical protein appser10_7280 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 957 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 9/104 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 DK I+ + E K ++ A + G+NLQ+ ++L+ + L W+ + +Q I R Sbjct: 495 DKRSALIEHFKE-KAQIMIAT-EAASEGVNLQF-CSLLINYDLPWNPQRVEQRIGRC--- 548 Query: 155 RQRQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V + + N D+ VL+ L K + +L A Sbjct: 549 --HRYGQKFDVVVINFLNKRNLADQRVLELLTEKFKLFQGVLGA 590 >gi|289621334|emb|CBI52117.1| unnamed protein product [Sordaria macrospora] Length = 1142 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 47/126 (37%), Gaps = 7/126 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 ++ N L + +G T + + + + + ++ + Sbjct: 850 LVFYENDNVAYYLAEVLEVLGIQHLIYAKGITSARKNQYLATFTLKQQFRVMLMDISQAA 909 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 +GL++ + + F + + + + + R R+ + V V L+ + +IDE++ Sbjct: 910 YGLDM-KTASRIYFINPVLNPQ-----VGAQAIGRARRISQHKPVTVETLVLRGSIDEVI 963 Query: 181 LQRLRT 186 ++R Sbjct: 964 VRRREE 969 >gi|331002100|ref|ZP_08325619.1| hypothetical protein HMPREF0491_00481 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411194|gb|EGG90610.1| hypothetical protein HMPREF0491_00481 [Lachnospiraceae oral taxon 107 str. F0167] Length = 2661 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G + +L G G N+Q L + W + +Q Sbjct: 2114 FIHEANSDKQKDELFSKVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2173 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2174 RAGRIVR----QGNENKEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2220 >gi|299471834|emb|CBN77004.1| chromatin remodeling complex subunit [Ectocarpus siliculosus] Length = 1297 Score = 52.1 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 9/112 (8%) Query: 97 DPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + E+N + +L + G GL+ + +VF L R R Sbjct: 92 RASRLSEFNTNERCRVLVVSITAGGQGLDFTA-ASNVVFVELPESPAWL-----RQAEDR 145 Query: 156 QRQAGFKRAVFVY-YLIAQNTIDELVLQRLRTKSTIQDLLLNA-LKKETIHV 205 + +++V VY ++ + D+ L K T Q ++N L E I V Sbjct: 146 LHRRRQEKSVNVYLTVLPTGSHDDTRWLSLSEKLTTQTSVMNGTLYAENIDV 197 >gi|255719067|ref|XP_002555814.1| KLTH0G18150p [Lachancea thermotolerans] gi|238937198|emb|CAR25377.1| KLTH0G18150p [Lachancea thermotolerans] Length = 1554 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 13/104 (12%), Positives = 34/104 (32%), Gaps = 7/104 (6%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 L + K ++++ + L + GL L + Sbjct: 1383 LKQHSVLHCNTAGAGKFSKMVEKFKKNPDVTCLLLNVTRQATGLTLVN-ATHVFIMDPIM 1441 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + + Q + R + G R V+ + +NT+++ +++ Sbjct: 1442 NTSDEQ-----QAINRTHRIGQTRETHVWNFVVRNTVEQNIVRL 1480 >gi|222612948|gb|EEE51080.1| hypothetical protein OsJ_31779 [Oryza sativa Japonica Group] Length = 1417 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-------KKETIHV 205 + G + V+ Y L+A T++E + +R TK + +++ K+E +H+ Sbjct: 1182 RYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVSRTISKEEMLHL 1236 >gi|326472754|gb|EGD96763.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818] Length = 1510 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLL 112 + L + + A IV F L+ + F G + DP I+ + + Sbjct: 1239 RHLLWLRQHDPGAKSIVFSQNKSFLVTLSHVFYWFKIGHSSIDDPSGIERFKEDHTTECF 1298 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G + V+ + Sbjct: 1299 LLHAKAHASGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHQDTTVWMYLV 1352 Query: 173 QNTIDELVLQR 183 NT++E + Q Sbjct: 1353 ANTVEESIYQI 1363 >gi|331004670|ref|ZP_08328131.1| hypothetical protein HMPREF0491_02993 [Lachnospiraceae oral taxon 107 str. F0167] gi|330409495|gb|EGG88937.1| hypothetical protein HMPREF0491_02993 [Lachnospiraceae oral taxon 107 str. F0167] Length = 909 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 4/115 (3%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R + + + +G+I +L G G N Q + + W Sbjct: 326 REIEFIHNANNNSEKDAIFDKVRKGEIRVLLGSTQKMGAGTNAQDKLIAIHDLDVPWRPA 385 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q RI Q V+++ + +NT D + Q L K ++ + Sbjct: 386 DLSQRAGRIVR----QGNENEDVYIFRYVTENTFDAYLFQTLENKQKYISQIMTS 436 >gi|291530112|emb|CBK95697.1| SNF2 family N-terminal domain [Eubacterium siraeum 70/3] Length = 1171 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G I +L G G+N+Q L + W + Q Sbjct: 829 FVHDAETETKRSLLFAKVRSGDIRILIGSTYKLGLGVNVQERLIALHHIDVPWRPADMTQ 888 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V++Y I + + D Q L TK LL+ Sbjct: 889 REGRILR----QGNTNSKVYIYRYITEGSFDAYSWQLLETKQRFISELLSG 935 >gi|303280403|ref|XP_003059494.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226459330|gb|EEH56626.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 1776 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 6/80 (7%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L +GLNL ++ D E + R + G + V+ Sbjct: 1670 RVLLMPLRRGANGLNLTE-AQHVILLEPVLDPGA-----EAQAMKRVDRIGQTKPTCVHR 1723 Query: 170 LIAQNTIDELVLQRLRTKST 189 + T++E V + R + Sbjct: 1724 FLLSGTVEENVHELSRRRRE 1743 >gi|213962117|ref|ZP_03390381.1| type III restriction enzyme, res subunit family [Capnocytophaga sputigena Capno] gi|213955123|gb|EEB66441.1| type III restriction enzyme, res subunit family [Capnocytophaga sputigena Capno] Length = 2020 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 8/106 (7%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ +++N GKI ++ A G+NLQ + +L ++ +Q R+ Sbjct: 1708 NQRLDIQEKFNAGKIKIVIGSEAI-QEGMNLQENTTDMYLLTLPYNFTSLRQTEGRMWR- 1765 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q V V Y++ ++ID +LQ+L+ K Q + A+KK Sbjct: 1766 ---QGNKWENVRVNYMLTNDSIDVFMLQKLQAK---QSRYMEAIKK 1805 >gi|156344365|ref|XP_001621159.1| hypothetical protein NEMVEDRAFT_v1g145813 [Nematostella vectensis] gi|156206838|gb|EDO29059.1| predicted protein [Nematostella vectensis] Length = 223 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 57/184 (30%), Gaps = 42/184 (22%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVH---------------------DEKIKALE 60 + +S +L N E+ ++ K++ L+ Sbjct: 46 STSSLGFITSLKKLCNHPELIYEKAQMEDEGFEGVREMFPQKFDLKNVQPELSGKMQVLD 105 Query: 61 VII---EKANAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG 107 I+ + + +++ ++ L +K Q ++ K + +N+ Sbjct: 106 YILAVTKATSDDKVVLVSNYTQTLDLFEKLCRQRRYQHVRLDGSMSIKKRQKIVDRFNDP 165 Query: 108 K--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 K + + G GLNL G N LV F W+ + + R + G K+ Sbjct: 166 KGGDFIFMLSSKAGGCGLNL-IGANRLVMFDPDWNPAN-----DDQAMARVWRDGQKKKA 219 Query: 166 FVYY 169 Sbjct: 220 SYRR 223 >gi|331231674|ref|XP_003328500.1| homeotic regulator [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309307490|gb|EFP84081.1| homeotic regulator [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 53 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 22/50 (44%) Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 +E V R + G + V+V++ + NTI+E ++ K + Sbjct: 4 HWNPTVEAQAVDRLHRIGQTKKVWVFHFVTPNTIEEKIIHVQNKKKQLAQ 53 >gi|291535497|emb|CBL08609.1| DNA methylase [Roseburia intestinalis M50/1] Length = 2587 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 4/112 (3%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T + + G++ +LF G G N+Q + W + + Sbjct: 2218 CFIHEATTDAQKKELFGKVRSGEVRVLFGSTPKMGAGTNVQDRLIAIHNLDCPWRPSDLE 2277 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q RI Q V VY + + T D + Q + +K ++ + Sbjct: 2278 QRQGRIER----QGNMFPEVEVYRYVTEQTFDAYLYQLVESKQKFISQIMTS 2325 >gi|303276775|ref|XP_003057681.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226460338|gb|EEH57632.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 509 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 21/193 (10%), Positives = 46/193 (23%), Gaps = 49/193 (25%) Query: 2 KQYHKFQRE--LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 + Y +F + + L ++ S ++ + Sbjct: 317 RLYQQFLKSGPVRAALNK----TGSALSAINVLKKICDHPALCCAITGASAADAAASSTF 372 Query: 53 ----------------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLA------ 82 K L ++ +N +V + L Sbjct: 373 TRSPSKSPGGSKSADLGGDPSASGKAAFLMDMLRHLASNGHRTLVFSQSRAMLDVLEKAA 432 Query: 83 ----RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D+ ++ + + IPL G GL L + +V + Sbjct: 433 AAEGHKLVRIDGNVPADERHARVERFQSDASIPLALLTSQVGGLGLTLTA-ADRVVIYDP 491 Query: 138 WWDLEEHQQMIER 150 W+ Q ++R Sbjct: 492 SWNPASDSQSVDR 504 >gi|327304455|ref|XP_003236919.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] gi|326459917|gb|EGD85370.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892] Length = 1515 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLL 112 + L + + A IV F L+ + F G + DP I+ + + Sbjct: 1246 RHLLWLRQHDPGAKSIVFSQNKSFLVTLSHVFYWFKIGHSSIDDPSGIERFKEDHTTECF 1305 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G + V+ + Sbjct: 1306 LLHAKAHASGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHQDTTVWMYLV 1359 Query: 173 QNTIDELVLQR 183 NT++E + Q Sbjct: 1360 ANTVEESIYQI 1370 >gi|323693253|ref|ZP_08107471.1| SNF2 family N-domain-containing protein [Clostridium symbiosum WAL-14673] gi|323502736|gb|EGB18580.1| SNF2 family N-domain-containing protein [Clostridium symbiosum WAL-14673] Length = 2971 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + G++ L A G G N+Q L + W + +Q Sbjct: 2528 FIHNANTETRKAELFAKVRSGQVRFLLGSTAKMGAGTNVQDRLIALHHLDVPWRPSDIEQ 2587 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + + T D Q + K ++ + Sbjct: 2588 QEGRILR----QGNMNDKVKIFRYVTEGTFDSYSWQLIENKQKFIGQIMTS 2634 >gi|256544790|ref|ZP_05472162.1| superfamily II DNA and RNA helicase [Anaerococcus vaginalis ATCC 51170] gi|256399679|gb|EEU13284.1| superfamily II DNA and RNA helicase [Anaerococcus vaginalis ATCC 51170] Length = 3649 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G+I +L G G N Q + + W + Q Sbjct: 3091 FIHKAKNNMEKDAIFDKVRKGEIRVLLGSTQKMGAGTNAQDKLIAIHDLDIPWRPADLSQ 3150 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V ++ + +NT D + Q L K ++ + Sbjct: 3151 RAGRIVR----QGNENKEVHIFRYVTENTFDAYLFQTLENKQKYISQIMTS 3197 >gi|154502921|ref|ZP_02039981.1| hypothetical protein RUMGNA_00741 [Ruminococcus gnavus ATCC 29149] gi|153796460|gb|EDN78880.1| hypothetical protein RUMGNA_00741 [Ruminococcus gnavus ATCC 29149] Length = 479 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 96 FIHEANTEVRKKELFSKVRTGQVRVLMGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 155 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + K ++ + Sbjct: 156 RKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 202 >gi|326484972|gb|EGE08982.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97] Length = 1517 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLL 112 + L + + A IV F L+ + F G + DP I+ + + Sbjct: 1246 RHLLWLRQHDPGAKSIVFSQNKSFLVTLSHVFYWFKIGHSSIDDPSGIERFKEDHTTECF 1305 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G + V+ + Sbjct: 1306 LLHAKAHASGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHQDTTVWMYLV 1359 Query: 173 QNTIDELVLQR 183 NT++E + Q Sbjct: 1360 ANTVEESIYQI 1370 >gi|218133897|ref|ZP_03462701.1| hypothetical protein BACPEC_01786 [Bacteroides pectinophilus ATCC 43243] gi|217991272|gb|EEC57278.1| hypothetical protein BACPEC_01786 [Bacteroides pectinophilus ATCC 43243] Length = 743 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + G++ L A G G N+Q L + W + +Q Sbjct: 307 FIHDANTELRKAELFAKVRSGQVRFLLGSTAKMGAGTNVQDRLIALHHLDVPWRPSDIEQ 366 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + + T D Q + K ++ + Sbjct: 367 QEGRILR----QGNQNDKVKIFRYVTEGTFDSYSWQLIENKQKFIGQIMTS 413 >gi|126326253|ref|XP_001370015.1| PREDICTED: similar to zinc finger, RAN-binding domain containing 3, [Monodelphis domestica] Length = 959 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 7/104 (6%) Query: 84 LQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + ++ + + + G GL ++F L+WD Sbjct: 115 RYIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTA-ATHVIFAELYWDPG 173 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + R + G +V ++YLIA T+D L+ L Sbjct: 174 HI-----KQAEDRAHRIGQSSSVNIHYLIANGTLDSLMWGMLNR 212 >gi|326387304|ref|ZP_08208914.1| helicase [Novosphingobium nitrogenifigens DSM 19370] gi|326208485|gb|EGD59292.1| helicase [Novosphingobium nitrogenifigens DSM 19370] Length = 874 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 10/103 (9%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + + +L A S G+NLQ+ ++LV F L W+ + +Q I R Sbjct: 400 KAAIVEAFKSDEKAILIAT-ESGAEGINLQF-CSLLVNFDLPWNPQRVEQRIGRC----- 452 Query: 157 RQAGFKRAVFVYYLI--AQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K V V ++ T ++ + + L K + + + A Sbjct: 453 HRYGQKIDVTVVNMLDLTNQT-EQRIHELLSEKFHLFEGVFGA 494 >gi|298241002|ref|ZP_06964809.1| helicase domain protein [Ktedonobacter racemifer DSM 44963] gi|297554056|gb|EFH87920.1| helicase domain protein [Ktedonobacter racemifer DSM 44963] Length = 949 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 3/97 (3%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I E +L G+NLQ N ++ + L W+ H+Q R+ Sbjct: 522 PPVERENRIAELGAHPQRVLVCT-DCLSEGINLQEHFNAVIHYDLSWNPTRHEQREGRVD 580 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q A R V Y + ++ID++VL L K Sbjct: 581 RFGQP-AKDVRVVTYYDG-SSDSIDQIVLDVLLRKHN 615 >gi|171920945|ref|ZP_02696009.2| superfamily II DNA and RNA helicase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|171903181|gb|EDT49470.1| superfamily II DNA and RNA helicase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] Length = 1871 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + +G+I +L G G N+Q + + W + +Q Sbjct: 1317 FIHEANTDKQKDELFAKVRKGEIRILMGSTQKMGAGTNVQNKLIAMHDLDVPWRPADLEQ 1376 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 1377 RSGRIVR----QGNENKEVSIYRYVTENTFDSYLWQTIENKQKFISQIMTS 1423 >gi|159481869|ref|XP_001698997.1| SWI/SNF2 superfamily protein [Chlamydomonas reinhardtii] gi|158273260|gb|EDO99051.1| SWI/SNF2 superfamily protein [Chlamydomonas reinhardtii] Length = 531 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 16/172 (9%), Positives = 41/172 (23%), Gaps = 10/172 (5%) Query: 4 YHKFQRELYCDLQGENIE------AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 Y + E + + ++ Q+A+ + Sbjct: 360 YDALELEARRIISHALATDELLDHYISVLEIILRLRQVADAGCLPRTAAPSAWTISPRTH 419 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFA 114 A + + ++ + G + + Sbjct: 420 ASLAANTCTANRMLNLVGRALEAEGISYVRLDGSTPAKARAERLRRFASREPGSPLVFLS 479 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + G G+NL + + WW+ +Q ++R+ Q + V Sbjct: 480 SLKAGGVGMNLTA-ASAVHLMDPWWNPAVEEQAMDRVHRLGQTRDVENGPVV 530 >gi|328725886|ref|XP_003248657.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like [Acyrthosiphon pisum] Length = 185 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 43/129 (33%), Gaps = 14/129 (10%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK--------DPCTIQEWNEGKIPL 111 +I + +++ +++ L L +A Q + + I Sbjct: 36 MELISQDPNVKVLIFSNWDKALNLLGEALDQNSISYRILKTGTKYKKTLKDFKLKKNINA 95 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L + GLNL + F + + E + + G + FV+ I Sbjct: 96 LLVKLSVGSKGLNLTE-ATRIFFMDPIINKAD-----EHQAIGTIHRLGQTKPTFVHNFI 149 Query: 172 AQNTIDELV 180 +++I+E + Sbjct: 150 IRDSIEENI 158 >gi|297736470|emb|CBI25341.3| unnamed protein product [Vitis vinifera] Length = 1717 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 10/105 (9%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + A G+T + P E+ + +L +GLNL +V Sbjct: 1552 HFRRQRTSAEGNGQTHAQQPEPEPEF----VQVLLLLIQHGANGLNLLE-AQHVVLVEPL 1606 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + E ++R + G + V+ I ++T++E + + Sbjct: 1607 LNPAA-----EAQAISRVHRIGQENRTLVHRFIVKDTVEESIYKL 1646 >gi|114583216|ref|XP_001152818.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a-like 1 isoform 1 [Pan troglodytes] Length = 575 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 8/133 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWN-EGKIPLLFAHPA 117 E + A+ ++ A + +Q G T + Q++ + + Sbjct: 347 EKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSIT 406 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GL +++VF L+W+ R + G +V ++YL+A+ T D Sbjct: 407 AANMGLTF-SSADLVVFAELFWNPGVLI-----QAEDRVHRIGQTSSVGIHYLVAKGTAD 460 Query: 178 ELVLQRLRTKSTI 190 + + ++ K + Sbjct: 461 DYLWPLIQEKIKV 473 >gi|260948488|ref|XP_002618541.1| hypothetical protein CLUG_02000 [Clavispora lusitaniae ATCC 42720] gi|238848413|gb|EEQ37877.1| hypothetical protein CLUG_02000 [Clavispora lusitaniae ATCC 42720] Length = 980 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 11/109 (10%) Query: 96 KDPCTIQEWNEGKIP-----LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + ++++ + L HGL + + F S W + +E Sbjct: 768 QRANNLSDFDDHDVEKNGGITLIMDLRLAAHGLTI-ISATRVYFTSPVWS-----RSVEA 821 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G K VFV L+ + T++E + +R +T + +++ LK Sbjct: 822 QAIKRAHRIGQKNEVFVETLVLKGTLEEEIYKRRQTDNAADSSVVDDLK 870 >gi|218134672|ref|ZP_03463476.1| hypothetical protein BACPEC_02575 [Bacteroides pectinophilus ATCC 43243] gi|217990057|gb|EEC56068.1| hypothetical protein BACPEC_02575 [Bacteroides pectinophilus ATCC 43243] Length = 1200 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + +E GK +L CG G+N+Q + W +Q Sbjct: 820 FIHDAKTDAQRDALFKEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHVDCPWKPSSIEQ 879 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V +Y + + T D + K ++ + Sbjct: 880 REGRGIR----QGNKNDEVAIYRYVTKQTFDAYNWSLVENKQRFISQVMTS 926 >gi|46108188|ref|XP_381152.1| hypothetical protein FG00976.1 [Gibberella zeae PH-1] Length = 1107 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 53/178 (29%), Gaps = 16/178 (8%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 +RE + + + K +++ K E Sbjct: 804 MERERMLASDDPEMNSQT-LAGNTKL---------GNDQHPSIRARSTKDAKPEAEAILD 853 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGR-TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 A + S + +D + + I A Sbjct: 854 GALGPLEEARITSTASIKLSYLIDNILRYQEDEKILIFYENDNIAWYLAGMLEVAAFGLD 913 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + + F S + + +E + R R+ K+AVFV L+ +++I+E++L+R Sbjct: 914 MREASRIFFISPVLNPQ-----VEAQAIGRARRISQKKAVFVETLVLKDSIEEVILER 966 >gi|113477685|ref|YP_723746.1| helicase-like [Trichodesmium erythraeum IMS101] gi|110168733|gb|ABG53273.1| helicase-like [Trichodesmium erythraeum IMS101] Length = 1138 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 70/186 (37%), Gaps = 19/186 (10%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP 70 L +L+ IE SK VK ++ + + K + E L+ ++ K Sbjct: 462 LALELEKREIE-----SKLVKLKEIITSKGIFQDRKMKLLIFTEHKDTLDYLVGKLRGWK 516 Query: 71 IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 + V + T +E+ E +L A A+ G+NLQ+ Sbjct: 517 LSVTQIHGGMKIGDR------DTPQTRIYAEREFREDA-QILVATEAAG-EGINLQF-CW 567 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + + + + W+ +Q + R + G ++ ++ +A NT + VL +L + Sbjct: 568 LTINYDIPWNPVRLEQRMGR-----THRYGQEKDCLIFNFVATNTREGRVLWKLFERIYA 622 Query: 191 QDLLLN 196 + L+ Sbjct: 623 IEADLD 628 >gi|332075663|gb|EGI86131.1| helicase conserved C-terminal domain protein [Streptococcus pneumoniae GA17545] Length = 784 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G + +L G G N+Q L + W + +Q Sbjct: 232 FIHEANSDKQKDELFAKVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 291 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 292 RAGRIVR----QGNENKEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 338 >gi|299883434|ref|YP_003738986.1| helicase domain protein [Halalkalicoccus jeotgali B3] gi|300712780|ref|YP_003738592.1| helicase domain protein [Halalkalicoccus jeotgali B3] gi|299126464|gb|ADJ16801.1| helicase domain protein [Halalkalicoccus jeotgali B3] gi|299126860|gb|ADJ17195.1| helicase domain protein [Halalkalicoccus jeotgali B3] Length = 980 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 68/194 (35%), Gaps = 22/194 (11%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN 78 + ++ + QL + + + +E I+ + I++ + Sbjct: 438 TLNRSQIDAELGRVKQL----WRQAKAIETDSKAELLREFVERILAEDPDEKILIFTEYT 493 Query: 79 SDLARLQKAFPQGRTLDK---------DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG 129 L L+ + + ++++ L + GLNLQ+ Sbjct: 494 DTLKYLRDTVFPEHDIAQVYGDLEQERRRREMEKFENEAN--LMLATDAAQEGLNLQF-A 550 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 +I+V + L W+ Q + R+ + G R V + L NT + +L+ L K+ Sbjct: 551 HIMVNYDLPWNPIRIDQRMGRL-----HRYGQDRTVEIRNLFFDNTRESDILELLLEKTD 605 Query: 190 IQDLLLNALKKETI 203 + L ++ + + Sbjct: 606 QIEADLG-MRSDVL 618 >gi|322411801|gb|EFY02709.1| SNF2 family protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 1826 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 4/91 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1730 FVHDANTDEKKNSLSRKVNSGEVRILIASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1789 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 R+ Q V +Y+ I + + D Sbjct: 1790 RNGRLIR----QGNMHNEVDIYHYITKGSFD 1816 >gi|218184670|gb|EEC67097.1| hypothetical protein OsI_33891 [Oryza sativa Indica Group] Length = 1143 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL-------KKETIHV 205 + G + V+ Y L+A T++E + +R TK + +++ K+E +H+ Sbjct: 1035 RYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVSRTISKEEMLHL 1089 >gi|313888375|ref|ZP_07822043.1| helicase C-terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845572|gb|EFR32965.1| helicase C-terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 3466 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G+I +L G G N Q + + W + Q Sbjct: 2912 FIHKAKNNMEKDAIFDKVRKGEIRVLIGSTQKMGAGTNAQDKLIAIHDLDIPWRPADLSQ 2971 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V ++ + +NT D + Q L K ++ + Sbjct: 2972 RAGRIVR----QGNENKEVHIFRYVTENTFDAYLFQTLENKQKYISQIMTS 3018 >gi|242243119|ref|ZP_04797564.1| phage helicase [Staphylococcus epidermidis W23144] gi|242233467|gb|EES35779.1| phage helicase [Staphylococcus epidermidis W23144] Length = 413 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 23/187 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K+Y +F RE L+ + A ++ T+ L + K+ L+ Sbjct: 232 KEYDEFIREGIVQLKDRKLIAETASVGTMNARLLC------------TAFNQNKLSMLKD 279 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKA----FPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 ++E +I+ Y +N + ++ ++ D + K + Sbjct: 280 LLESTED-RLIIFYQYNLEKEAIENVVKELNKPISYINGDLVDKNAYENKKSSITLVQYQ 338 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 S G NLQ N ++FF L + + R + G +R F YY++ T + Sbjct: 339 SGSFGHNLQK-ANKIIFFGLPNRVSFFE-----QSRKRTHRIGQERPCFYYYMLTLGTYE 392 Query: 178 ELVLQRL 184 Q L Sbjct: 393 WKNYQTL 399 >gi|255547283|ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis] gi|223546303|gb|EEF47805.1| ATP binding protein, putative [Ricinus communis] Length = 1229 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 11/135 (8%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-DPCTIQEWNEGK----IPL 111 + +I A+ ++ + G TL + ++ + + + Sbjct: 546 CISQKMIIFAHHHKVLDGVQELIFEKGIGFVRIDGNTLPRDRQSAVRSFQSSNEASIVKI 605 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GL+ +VF L R + G AV +Y Sbjct: 606 AIIGVTAGGVGLDF-SSAQNVVFLELPQSSSLML-----QAEDRAHRRGQTNAVNIYIFC 659 Query: 172 AQNTIDELVLQRLRT 186 A++T+DE Q L Sbjct: 660 AKDTVDERHWQYLNK 674 >gi|256544992|ref|ZP_05472360.1| SNF2 family prophage LambdaSa04, helicase [Anaerococcus vaginalis ATCC 51170] gi|256399288|gb|EEU12897.1| SNF2 family prophage LambdaSa04, helicase [Anaerococcus vaginalis ATCC 51170] Length = 78 Score = 51.7 bits (122), Expect = 7e-05, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Query: 11 LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP 70 + ++ ++I+A NSA+ + K LQ+A+G+V YDE+K+ +HD KI ALE +IE AN P Sbjct: 1 MVVSIKEKDIDAVNSAALSNKLLQMASGSV-YDEDKNMIRIHDRKIDALENLIEGANGKP 59 Query: 71 IIVAYHFNSDLARLQ 85 + +AY + SDL R++ Sbjct: 60 VPIAYWYKSDLKRIK 74 >gi|304439303|ref|ZP_07399219.1| superfamily II DNA and RNA helicase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372222|gb|EFM25812.1| superfamily II DNA and RNA helicase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 3645 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G+I +L G G N Q + + W + Q Sbjct: 3091 FIHKAKNNMEKDAIFDKVRKGEIRVLIGSTQKMGAGTNAQDKLIAIHDLDIPWRPADLSQ 3150 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V ++ + +NT D + Q L K ++ + Sbjct: 3151 RAGRIVR----QGNENKEVHIFRYVTENTFDAYLFQTLENKQKYISQIMTS 3197 >gi|317481229|ref|ZP_07940300.1| hypothetical protein HMPREF1007_03419 [Bacteroides sp. 4_1_36] gi|316902562|gb|EFV24445.1| hypothetical protein HMPREF1007_03419 [Bacteroides sp. 4_1_36] Length = 1662 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +T I++ N G I +LF + G G+N Q + + W + + Sbjct: 1292 QFIQTAKTEKARKRMIEDMNNGTIRVLFGSTSMLGTGVNAQKRAVAVHHIDIPWRPADLE 1351 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V V + T+D L+ K + + Sbjct: 1352 QRNGRAVRKGNTVKLWGNNTVDVIIYGTEKTLDAYKFNLLKNKQMFINQI 1401 >gi|224010774|ref|XP_002294344.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220969839|gb|EED88178.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1504 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 22/172 (12%) Query: 22 AFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL 81 A + K LQL N + ++ E+ IV F Sbjct: 1281 ASKAKYTIDKLLQLRN-----ESSRNVSELAVRMFSKSSTHSSSHRPLKAIVFSQFRPIY 1335 Query: 82 ARLQ----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 T ++ + + + ++ HGL+L Sbjct: 1336 EYFGDRLIREFGGACVADFSFTKTRNEELKKFRLDPQCFIMLLS-KQGSHGLDL-SFCTH 1393 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + F +D QQ++ R + G V+V L A+++I+E++ + Sbjct: 1394 IFFLDTIYDKSLEQQVVAR-----AYRMGATGPVYVEQLTAKDSIEEVMNEM 1440 >gi|317033838|ref|XP_001395547.2| C-5 cytosine-specific DNA methylase [Aspergillus niger CBS 513.88] Length = 2044 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 22/172 (12%) Query: 54 EKIKALEVIIEKAN-AAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQE 103 K+ L I+ ++ + DLA+++ Q Sbjct: 1862 SKLDKLIEILNGIPSNERALIFIQYPELIEVASKALDLAKIKHTAILTTDRKSMQKIEQF 1921 Query: 104 WNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI--ERIGVTRQRQA 159 G+ L + N ++F S + E + R R+ Sbjct: 1922 QQTSFGEDKALILNLGGEMAAGLNLQSANHVIFLS-PMNAETQYDYESAMIQAIGRSRRY 1980 Query: 160 GFKRAVFVYYLIAQNTID-----ELVLQRLRTKSTIQDLLL--NALKKETIH 204 G R V VY+L+A+++ID E Q L ++ +L+ AL E I Sbjct: 1981 GQTRRVHVYHLLAKHSIDVNIFQERRHQVLIERNGKAELVAHGEALDGEWIR 2032 >gi|315652657|ref|ZP_07905634.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315485101|gb|EFU75506.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 833 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + +G+I +L G G N Q + + W + Q Sbjct: 254 FIHNANNNREKDAIFDKVRKGEIRVLLGSTQKMGAGTNAQDKLIAIHDLDVPWRPADLSQ 313 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V+++ + +NT D + Q L K ++ + Sbjct: 314 RAGRIVR----QGNENEDVYIFRYVTENTFDAYLFQTLENKQKYISQIMTS 360 >gi|226334820|ref|YP_002784492.1| hypothetical protein ROP_pKNR-00480 [Rhodococcus opacus B4] gi|226246040|dbj|BAH56140.1| hypothetical protein [Rhodococcus opacus B4] Length = 2889 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 8/101 (7%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G++ +L + G G+N+Q L W + +Q RI Q + V Sbjct: 2323 GEVKVLIGSSETMGTGMNVQKRATALYHVDCPWRPADLEQREGRIIR----QGNQNKTVE 2378 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLL----LNALKKETI 203 + ++ + + D Q + KS + L ++ + E I Sbjct: 2379 IINIVGERSYDTTKWQTVEKKSAYIEQLRRGAIDFSEAEDI 2419 >gi|7019996|dbj|BAA90955.1| unnamed protein product [Homo sapiens] Length = 619 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 8/133 (6%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWN-EGKIPLLFAHPA 117 E + A+ ++ A + +Q G T + Q++ + + Sbjct: 391 EKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSIT 450 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GL +++VF L+W+ R + G +V ++YL+A+ T D Sbjct: 451 AANMGLTF-SSADLVVFAELFWNPGVLI-----QAEDRVHRIGQTSSVGIHYLVAKGTAD 504 Query: 178 ELVLQRLRTKSTI 190 + + ++ K + Sbjct: 505 DYLWPLIQEKIKV 517 >gi|240047625|ref|YP_002961013.1| hypothetical protein MCJ_005050 [Mycoplasma conjunctivae HRC/581] gi|239985197|emb|CAT05210.1| HYPOTHETICAL PROTEIN MCJ_005050 [Mycoplasma conjunctivae] Length = 400 Score = 51.3 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 15/191 (7%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 +K+Y E I NS +LA+G + E + V + KI Sbjct: 197 VKEYKYMVEAPQEYFAKEKITFNNSKLEMQDLTNLRKLASG-ILIGENRKATIVSNYKIN 255 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE---GKIPLLFA 114 ++ +I+ + Y+FN +L ++++ + + + + ++ ++ Sbjct: 256 YIKKLIQ--PKTNYCIFYNFNEELEMIKESLSKFKIFEINKTKVELQEALKYEDNFIIAI 313 Query: 115 HPASCGHGLN-LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G L+ ++FS + E+ Q RI + G K+ V YY+ + Sbjct: 314 QYKWGARGFKGLENKVFNQIYFSPSLNKEDFWQSYIRI-----YRPGQKQEVNFYYIAGK 368 Query: 174 NTIDELVLQRL 184 N+I+ + L Sbjct: 369 NSIELAIYHHL 379 >gi|307104958|gb|EFN53209.1| hypothetical protein CHLNCDRAFT_137064 [Chlorella variabilis] Length = 2583 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 9/117 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 T ++ +Q++ G+ + + HG+NL I+V W Sbjct: 1936 CKIEGSTTDNQRTQYVQDFEGGRYQVFLLS-KAGTHGINLVSCRRIVVLEEPWN------ 1988 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN--ALKK 200 + + R + G FVY + + V R K + +++ ++K+ Sbjct: 1989 PVYNLQAIARLFRYGQAHGTFVYRMYFNGAVQYNVYLRNVNKVMLFKRVIDRQSVKR 2045 >gi|240147471|ref|ZP_04746072.1| putative superfamily II DNA and RNA helicase [Roseburia intestinalis L1-82] gi|257200333|gb|EEU98617.1| putative superfamily II DNA and RNA helicase [Roseburia intestinalis L1-82] Length = 1446 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + +E GK +L CG G+N+Q + W +Q Sbjct: 1066 FIHDAKTDAQRDALFKEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHVDCPWKPSSIEQ 1125 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V +Y + + T D + K ++ + Sbjct: 1126 REGRGIR----QGNKNDEVAIYRYVTKQTFDAYNWSLVENKQRFISQVMTS 1172 >gi|117924655|ref|YP_865272.1| helicase domain-containing protein [Magnetococcus sp. MC-1] gi|117608411|gb|ABK43866.1| helicase domain protein [Magnetococcus sp. MC-1] Length = 954 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 22/201 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHW----KEVHDEKIKALE 60 + +++ DLQ E+I ++ + Q+ + D K A Sbjct: 393 RQLEKQENPDLQ-EDIGVLKVLAE--EVRQITPEHFTKYQRLVQAIRRDFGWDGKNTADR 449 Query: 61 VIIE-KANAAPIIVAYHFNSDLARLQKAF---PQGRTLDKDPCTIQEWNEGKIPL-LFAH 115 +++ + +A H DL K + + ++ + + + P+ L Sbjct: 450 LVLFTERIETLKFLAEHLPRDLKLKDKQVEILHGSMSDVEQQQVVEAFGKDEEPVRLLIA 509 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ-- 173 G+NL Y + ++ F + W L QQ RI + G ++ + YL Sbjct: 510 SDVASEGINLHYLCHRMIHFDIPWSLMVFQQRNGRID-----RYGQEQTPHIVYLTTNSQ 564 Query: 174 -NTI--DELVLQRLRTKSTIQ 191 + I D +L+ L K Sbjct: 565 NDKIRGDMRILELLIQKDEQA 585 >gi|159038639|ref|YP_001537892.1| helicase domain-containing protein [Salinispora arenicola CNS-205] gi|157917474|gb|ABV98901.1| helicase domain protein [Salinispora arenicola CNS-205] Length = 956 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 11/117 (9%) Query: 88 FPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G D+ + + + I +L G+NL + L+ + + W L + Sbjct: 483 MHGGLPDDEQQQIVDAFKQEHAAIRVLV-TGDVASEGVNLHAQCHHLIHYDIPWSLIRIE 541 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNT----IDELVLQRLRTKSTIQDLLLNAL 198 Q RI RQRQ + L+ ++ D +L +L K L + Sbjct: 542 QRNGRIDRYRQRQP----PRIIALLLDPDSGRFAGDIRILAKLVDKENEAHRALGDV 594 >gi|78190607|gb|ABB29625.1| SNF2 family DNA-dependent ATPase domain-containing protein [Priapulus caudatus] Length = 429 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 52/194 (26%), Gaps = 53/194 (27%) Query: 1 MKQYHKFQRELYCDLQGENIEAF-------NSASKTVKCLQLANGAVYYDEEKH------ 47 ++ Y F + E + A + ++ N + + H Sbjct: 236 VQLYEDFAKSRARVDAEEQMGASEAARPHSHVFQCLQYLRKVCNHPLLVLQPDHPLYRQI 295 Query: 48 -----------WKEVHDEKIKALEVIIEKAN--------------AAPIIVAYHFNSDLA 82 H K+ AL +++ +V F S L Sbjct: 296 ADQLDRTATSLCSLQHSGKLVALRQLLQDCGIGVGERAPAEAVVGEHRALVFCQFKSMLD 355 Query: 83 RLQKA----FPQGRTLDK---------DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYG 128 ++K T + + + N+ I +L G GLNL G Sbjct: 356 IVEKHLLKPHMPSLTYLRLDGSIPAGSRHSIVNRFNNDPSIDVLLLTTHVGGLGLNLT-G 414 Query: 129 GNILVFFSLWWDLE 142 + ++F W+ Sbjct: 415 ADTVIFVEHDWNPM 428 >gi|85089833|ref|XP_958131.1| hypothetical protein NCU07358 [Neurospora crassa OR74A] gi|28919457|gb|EAA28895.1| predicted protein [Neurospora crassa OR74A] Length = 1085 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 50/126 (39%), Gaps = 7/126 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 ++ N L + +G T ++ + + + KI ++ + Sbjct: 797 LVFYENDNVAYYLAEVLEVLGIQHLIYAKGITSERKNHHLATFTLKPKIRVMLMDVSQAA 856 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 +GL++ + + F + + + + + R R+ ++ V V L+ + +IDE++ Sbjct: 857 YGLDM-KTASRIYFINPVLNPQ-----VGAQAIGRARRISQQKPVTVETLVLRGSIDEVI 910 Query: 181 LQRLRT 186 ++R Sbjct: 911 VRRREE 916 >gi|145225878|ref|YP_001136532.1| methyltransferase type 11 [Mycobacterium gilvum PYR-GCK] gi|145218341|gb|ABP47744.1| Methyltransferase type 11 [Mycobacterium gilvum PYR-GCK] Length = 1594 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 6/121 (4%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + + T +G++ +L G G N+Q + L W Sbjct: 1244 MIRFAHEATTPKAREALFAGCRDGRVAVLIGSTPKVGIGTNIQNRLHSLHHVDPTWTAAA 1303 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--LNALKKE 201 +Q R R V +Y + + T D + + K+ + L ++ +E Sbjct: 1304 WEQRNGR----AVRNGNQHDVVDIYSYVTEGTFDAYMFGIVERKARGFEQLYRVDGQARE 1359 Query: 202 T 202 Sbjct: 1360 I 1360 >gi|116198109|ref|XP_001224866.1| hypothetical protein CHGG_07210 [Chaetomium globosum CBS 148.51] gi|88178489|gb|EAQ85957.1| hypothetical protein CHGG_07210 [Chaetomium globosum CBS 148.51] Length = 1480 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 44/149 (29%), Gaps = 10/149 (6%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPC 99 + + D + L + + A IV + L ++ + DK Sbjct: 1237 DGPSFTTKVDMLTRHLMWLRDFDPGAKSIVFSQYKEFLDVLALAFRRYRIGYTSFDKAHG 1296 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + H + GLNL N + + Q I R+ + Sbjct: 1297 IAIFKEDPGTEVFLLHARAHASGLNLVN-ANHVFLCEPLLNTALELQAIARVD-----RI 1350 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 G + V+ I T++E + + Sbjct: 1351 GQQHGTTVWLYIVDGTVEESIHDLSVQRR 1379 >gi|269839175|ref|YP_003323867.1| helicase [Thermobaculum terrenum ATCC BAA-798] gi|269790905|gb|ACZ43045.1| helicase domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 1160 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 8/110 (7%) Query: 89 PQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + + +E+ + + +L A A+ G+NLQ N+LV + L W+ +Q Sbjct: 535 HGGMSREDRMRCQEEFVHNPDVHVLVATDAAG-EGINLQR-ANLLVNYDLPWNPNRLEQR 592 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ L+A+ T + V L TK Q L Sbjct: 593 FGRI-----HRIGQTEVCHMWNLVAKGTREGEVYLTLLTKLDQQSKALGG 637 >gi|218200743|gb|EEC83170.1| hypothetical protein OsI_28396 [Oryza sativa Indica Group] Length = 848 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 7/94 (7%) Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + ++N +LF + G G++L G + +V + +L R + Sbjct: 653 QLAMDQFNGSADAKVLFGSIKAFGEGISL-VGASRIVILDIHLNLSVT-----RQAIGST 706 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + G K+ VFVY L+A ++ +E + K I Sbjct: 707 FRPGQKKKVFVYRLVAADSPEEKTHETAFNKEVI 740 >gi|315040573|ref|XP_003169664.1| hypothetical protein MGYG_08572 [Arthroderma gypseum CBS 118893] gi|311346354|gb|EFR05557.1| hypothetical protein MGYG_08572 [Arthroderma gypseum CBS 118893] Length = 1256 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 54/187 (28%), Gaps = 26/187 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVA--YHFNSDLARLQKAF-------- 88 E + K+ L ++ + +V LA L Sbjct: 791 PASRAEMALYLARSAPKLCYLVKLLTQKKGKKCLVFLKSPMTLWLALLLLDLLEFKALVI 850 Query: 89 PQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G D+ + +N+ +L A G GLNL N ++ + Sbjct: 851 HAGMDADEREQAARNFNDPAHDCQVLLTTYACGGVGLNLHGDCNTVILVE----PALNVN 906 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS---------TIQDLLLNA 197 I + R + G ++ V+ L Q++ D + K + D L Sbjct: 907 TII-QAIGRLHRLGQQQEQEVFILFLQHSWDRFIEHNSAKKMVGQIVADNADMFDKFLAE 965 Query: 198 LKKETIH 204 ++ H Sbjct: 966 IQARVEH 972 >gi|312877476|ref|ZP_07737438.1| helicase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795732|gb|EFR12099.1| helicase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 337 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 + G +D+ E+ K ++ A A+ G+NLQ+ ++V + + W Sbjct: 204 EWGYAVVTIHGGMNMDERIRAEHEFKN-KAQVMVATEAAG-EGINLQF-CWLMVNYDIPW 260 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +Q + RI + G + V +Y L++ +T + +LQ+L K L + + Sbjct: 261 NPNRLEQRMGRI-----HRYGQQSEVHIYNLVSGDTKEGQILQKLFQKLEAMRAHLGSDR 315 >gi|225562273|gb|EEH10552.1| ATP-dependent DNA helicase [Ajellomyces capsulatus G186AR] Length = 1468 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFN---SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + L + + A IV + L R F G + ++++ + + Sbjct: 1199 RHLIWLRQHDPGAKSIVFSQYKPFLGILGRAFSHFKIGYSSIDSSDGVEQFKTDPSVECF 1258 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G K+ V+ + Sbjct: 1259 LLHAKAHSSGLNL-INATHVFLCEPLINTA-----IELQAIARVHRIGQKQETTVWMYLV 1312 Query: 173 QNTIDELVLQR 183 ++++E + Sbjct: 1313 SDSVEESIYDI 1323 >gi|303233580|ref|ZP_07320238.1| helicase C-terminal domain protein [Finegoldia magna BVS033A4] gi|302495324|gb|EFL55072.1| helicase C-terminal domain protein [Finegoldia magna BVS033A4] Length = 3641 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G+I +L G G N Q + + W + Q Sbjct: 3087 FIHKAKNNREKDAIFDKVRKGEIRVLLGSTQKMGAGTNAQDKLIAIHDLDVPWRPADLAQ 3146 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V ++ + +NT D + Q L K ++ + Sbjct: 3147 RAGRIVR----QGNENKEVHIFRYVTENTFDAYLFQTLENKQKYISQIMTS 3193 >gi|134299055|ref|YP_001112551.1| helicase domain-containing protein [Desulfotomaculum reducens MI-1] gi|134051755|gb|ABO49726.1| helicase domain protein [Desulfotomaculum reducens MI-1] Length = 456 Score = 51.3 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 8/110 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ G I L + + CG G+N Q N + F L E+ Sbjct: 316 SHKPAYKEKAMLDFAAGDIKRLVSKSSICGFGMNFQ-VCNRMAFVGLSDSFEQIF----- 369 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + R + G + V VY +I T + VL+ ++ K +++ + + Sbjct: 370 QAIRRCWRFGQTKPVDVY-IITAET-EGAVLENIKRKEQDFKNMVDEMVR 417 >gi|195569075|ref|XP_002102537.1| GD19450 [Drosophila simulans] gi|194198464|gb|EDX12040.1| GD19450 [Drosophila simulans] Length = 85 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ L W+ + ER R + G + F+Y + Q+T+++ + K I Sbjct: 1 MLIVDLHWNPQL-----ERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEIA 55 Query: 192 DLLL 195 ++L Sbjct: 56 KVVL 59 >gi|169602036|ref|XP_001794440.1| hypothetical protein SNOG_03896 [Phaeosphaeria nodorum SN15] gi|160706060|gb|EAT89101.2| hypothetical protein SNOG_03896 [Phaeosphaeria nodorum SN15] Length = 1444 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 42/131 (32%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYHF---NSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + L I A I+ F L + + G + D IQ + + I Sbjct: 1213 RHLLWIRANDPGAKSIIFSQFGDFLEVLREALRKWRIGVSGIIDKEGIQRFKSDAGIECF 1272 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 S GLNL + + IE + R + G +R V+ + Sbjct: 1273 LLDAKSDSSGLNLVN-ATYVFLCEPLINPA-----IELQAIARVHRIGQQRPTTVFMYLI 1326 Query: 173 QNTIDELVLQR 183 +T++E + Sbjct: 1327 SDTVEEAIYDI 1337 >gi|302509586|ref|XP_003016753.1| SNF2 family helicase, putative [Arthroderma benhamiae CBS 112371] gi|291180323|gb|EFE36108.1| SNF2 family helicase, putative [Arthroderma benhamiae CBS 112371] Length = 2114 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 18/174 (10%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP----IIVAYHFNSDLA-----RLQKA 87 + + + K A+ ++E P +++ F + + Sbjct: 1902 CHSERHTPTDKLAKYGSSKFTAVIDLLEDTEKVPADDQVLLFIQFPELMDAASKALQSVS 1961 Query: 88 FPQGRTLDKDP---CTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 P D I E+ GK +L + N ++FF Sbjct: 1962 IPHTVIQPGDRTPTSKISEFQNGKESVKSKVLILNLGDVTASGLNLQNANHIIFFGPLVS 2021 Query: 141 LEEH-QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 ++ + R R+ G + V +Y+++A T++ + + R K + Sbjct: 2022 RSQYDYDSGMAQAIGRSRRYGQLKHVHIYHVLALRTVEVNIFE-QRRKQYLAKR 2074 >gi|240254615|ref|NP_181609.4| ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding [Arabidopsis thaliana] gi|330254782|gb|AEC09876.1| RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [Arabidopsis thaliana] Length = 1664 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 31/86 (36%), Gaps = 6/86 (6%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + E I +L +GLNL ++ + E V R + G Sbjct: 1505 HQKEEKSIQVLLLLVQHGANGLNLLE-AQHVILVEPLLNPAA-----EAQAVGRVHRIGQ 1558 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTK 187 ++ V+ + T++E + + R K Sbjct: 1559 EKPTLVHRFLVSGTVEESIYKLNRNK 1584 >gi|224543131|ref|ZP_03683670.1| hypothetical protein CATMIT_02331 [Catenibacterium mitsuokai DSM 15897] gi|224523918|gb|EEF93023.1| hypothetical protein CATMIT_02331 [Catenibacterium mitsuokai DSM 15897] Length = 517 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 4/114 (3%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + T + + G++ +L G G N+Q + W + Sbjct: 146 QVRFIHEATTDAQKKELFAKVRSGEVRVLLGSTPKMGAGTNVQDRLIAIHNLDCPWRPSD 205 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Q RI Q V VY + + T D + Q + +K ++ + Sbjct: 206 LEQRQGRIER----QGNMFLEVEVYRYVTEQTFDAYLYQLVESKQKFISQIMTS 255 >gi|168028268|ref|XP_001766650.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162682082|gb|EDQ68503.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1180 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 40/137 (29%), Gaps = 8/137 (5%) Query: 60 EVIIEKANAAPIIVAYH-FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IPLLFAHPA 117 E II A+ ++ F + + + + + Sbjct: 428 EKIIIFAHHLKVLDTIQTFVQSKGVEYVRIDGSTLPQDRLKNVNRFRSQREVKVAIVGLQ 487 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G GL+ +VF L E R + G K +V +Y +A+ T D Sbjct: 488 AGGVGLDF-SAAQSVVFVELPKSASEML-----QAEDRAHRRGQKNSVNIYIFVAKGTAD 541 Query: 178 ELVLQRLRTKSTIQDLL 194 + Q L + Sbjct: 542 DRHWQSLSRSLERVSTM 558 >gi|229827047|ref|ZP_04453116.1| hypothetical protein GCWU000182_02431 [Abiotrophia defectiva ATCC 49176] gi|229788665|gb|EEP24779.1| hypothetical protein GCWU000182_02431 [Abiotrophia defectiva ATCC 49176] Length = 2218 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + G++ +L G G N+Q L + W + +Q Sbjct: 1768 FIHDAGNDIQKEKVFSKVRTGEVRILMGSTHKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 1827 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V++Y + +NT D + Q + K ++ + Sbjct: 1828 RAGRIVR----QGNENSDVYIYRYVTENTFDAYLWQTIENKQKFISQIMTS 1874 >gi|226322846|ref|ZP_03798364.1| hypothetical protein COPCOM_00618 [Coprococcus comes ATCC 27758] gi|225208827|gb|EEG91181.1| hypothetical protein COPCOM_00618 [Coprococcus comes ATCC 27758] Length = 720 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G++ L A G G N+Q L + W + +Q Sbjct: 326 FIHDANTEAKKTELFGKVKSGQVRFLIGSTAKMGAGTNVQDRLIALHHLDIGWKPSDLEQ 385 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V ++ + ++T D + Q + K ++ + Sbjct: 386 REGRIIR----QGNHNKKVHIFRYVTESTFDSYMWQLIENKQKFISQIMTS 432 >gi|300777180|ref|ZP_07087038.1| res subunit family type III restriction enzyme [Chryseobacterium gleum ATCC 35910] gi|300502690|gb|EFK33830.1| res subunit family type III restriction enzyme [Chryseobacterium gleum ATCC 35910] Length = 1345 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 70/230 (30%), Gaps = 39/230 (16%) Query: 2 KQYH----KFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE----- 50 K+Y E Y L + E + + +A Sbjct: 904 KEYKIEQNDLTEEQYEQLTDNFDENEKGAILTHILNARLIAISPYLSPYYYGEFPSVDEF 963 Query: 51 -VHDEKIKALEVIIEKANA---------APIIVAYHFNSDLARLQKAFPQGR-------- 92 + K+ +I + + F L Sbjct: 964 IENSPKLNETMNLIRQNKRDIPEAGQIIYSELAVAEFPRMKEYLVTNIGYKPEEIGIITG 1023 Query: 93 --TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T + ++N GKI ++ A G+NLQ L SL ++ +Q+ R Sbjct: 1024 ATTKSQRISIQNDFNIGKIKVIIGSEAI-QEGMNLQENTTDLYLLSLPYNFTTLRQVEGR 1082 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q V V +++ ++ID +LQ+L++K Q L A+KK Sbjct: 1083 AWR----QGNRHENVRVNFMLTNDSIDVFMLQKLQSK---QARYLEAMKK 1125 >gi|121698875|ref|XP_001267835.1| C-5 cytosine-specific DNA methylase, putative [Aspergillus clavatus NRRL 1] gi|119395977|gb|EAW06409.1| C-5 cytosine-specific DNA methylase, putative [Aspergillus clavatus NRRL 1] Length = 2150 Score = 51.3 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 48/145 (33%), Gaps = 10/145 (6%) Query: 54 EKIKALEVIIEKANA-APIIVAYHFNSDLARLQKAFP-----QGRTLDKDPCTIQEWNEG 107 K+ L I+ I+ + + KAF D I+E+ + Sbjct: 1971 SKLDKLIEIVRSIPKEDRAILFIQYKELIEIASKAFDLAKITHTVISAGDSKKIEEFKKP 2030 Query: 108 KI---PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH-QQMIERIGVTRQRQAGFKR 163 +L + S N + F S ++ + R R+ G + Sbjct: 2031 SFGNNRILILNLGSEMAAGLNLQCANHVFFLSPMLTQTQYDYDSSMTQAIGRARRYGQIK 2090 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKS 188 V VY+L+ + TID + Q R K Sbjct: 2091 HVHVYHLLVKRTIDVNIFQDRRGKI 2115 >gi|126697994|ref|YP_001086891.1| putative helicase [Clostridium difficile 630] gi|115249431|emb|CAJ67246.1| putative DNA/RNA helicase Tn1549-like,CTn2-Orf18 [Clostridium difficile] Length = 2907 Score = 50.9 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G+I +L G G N+Q L + W + +Q Sbjct: 2355 FIHEANSDKQKDELFAKVRKGEIRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2414 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2415 RAGRIVR----QGNENKEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2461 >gi|254228180|ref|ZP_04921609.1| helicase [Vibrio sp. Ex25] gi|262394013|ref|YP_003285867.1| helicase putative [Vibrio sp. Ex25] gi|151939253|gb|EDN58082.1| helicase [Vibrio sp. Ex25] gi|262337607|gb|ACY51402.1| helicase putative [Vibrio sp. Ex25] Length = 1149 Score = 50.9 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 24/217 (11%), Positives = 64/217 (29%), Gaps = 43/217 (19%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVII 63 L+ + ++ + ++ + D + + KI +L + Sbjct: 771 QLENKE---SHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYGESGKIVSLLETL 827 Query: 64 EK--ANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPCTIQ 102 ++ + I+ S + KA + ++ I Sbjct: 828 DRVRSKHEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKSAPTRKSMIS 887 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + L G N +V W+ + E R + G + Sbjct: 888 DFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERHWNPAK-----EAQATDRVYRIGQE 942 Query: 163 RAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 + V +Y + + + D + + L K+ ++D ++ Sbjct: 943 KDVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 979 >gi|296280707|gb|ADH04649.1| unknown [Chondromyces crocatus] Length = 993 Score = 50.9 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 42/107 (39%), Gaps = 7/107 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N P++ GL+L +V L W+ + +Q + R+ Sbjct: 851 RERLREAFNTPLYPMILVANEVMQEGLDLHRHCRRIVHHDLAWNPAQLEQRVGRVDRIGS 910 Query: 157 ------RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + +Y L+ + TIDE + + ++++ + LL A Sbjct: 911 LTTKLLARDPSTKLDILYPLVHR-TIDERLFRTVKSREKWLEFLLGA 956 >gi|218200266|gb|EEC82693.1| hypothetical protein OsI_27351 [Oryza sativa Indica Group] Length = 1547 Score = 50.9 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 6/86 (6%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +L +GLNL ++ + E ++R Sbjct: 1388 KAKKSFSKMQPAQVLLMLIQHGANGLNLLE-AQHVILVEPLLNPAA-----EAQAISRIH 1441 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQR 183 + G ++ F++ I +NTI+E + + Sbjct: 1442 RVGQDKSTFIHRFIVKNTIEESIYKL 1467 >gi|227500577|ref|ZP_03930626.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] gi|227217318|gb|EEI82655.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] Length = 449 Score = 50.9 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G+I +L G G N Q + + W + Q Sbjct: 147 FIHKAKNNMEKDAIFDKVRKGEIRVLLGSTQKMGAGTNAQDKLIAIHDLDIPWRPADLSQ 206 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V ++ + +NT D + Q L K ++ + Sbjct: 207 RAGRIVR----QGNENKEVHIFRYVTENTFDAYLFQTLENKQKYISQIMTS 253 >gi|323452538|gb|EGB08412.1| hypothetical protein AURANDRAFT_64133 [Aureococcus anophagefferens] Length = 1459 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 52/171 (30%), Gaps = 17/171 (9%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQG 91 L + + K+ L +E +V + L + A Q Sbjct: 1271 LCRQPLADARHDRSRVDFGAKLDELADDVEAHVTRKGLKCLVFSSWTDALDLVAVALKQR 1330 Query: 92 RTL-------DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + P ++ + + + L + ++ GLNL + D Sbjct: 1331 GVASLALKGGKQAPKILEAFKADPHVSALLMNISTNNAGLNL-SEATHVFLLDTNLDHAR 1389 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 E + R ++ K V+ + +I++ + Q +K+T L Sbjct: 1390 -----ETQALARVQRLDSKSETTVHRYVTGGSIEDAIWQLRLSKATAAGEL 1435 >gi|302653761|ref|XP_003018701.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] gi|291182365|gb|EFE38056.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] Length = 519 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 44/147 (29%), Gaps = 27/147 (18%) Query: 61 VIIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 ++++ I + F ++ I+ + E + Sbjct: 274 NWLKESPDIKITIFTQFLGMISAIASVCEAEGWRYTTLCGKLHHRTRHANIKRFREENVS 333 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + + G GL+L + + LWW+ + V + + Sbjct: 334 ILISSLKAGGVGLDLT-MASKCILVDLWWNEA----------------IEQQNDVEIIRI 376 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 +NT+D+ + KS + + Sbjct: 377 CVENTVDDRLQLIQSRKSEHIRKAMGS 403 >gi|261366396|ref|ZP_05979279.1| helicase [Subdoligranulum variabile DSM 15176] gi|282571656|gb|EFB77191.1| helicase [Subdoligranulum variabile DSM 15176] Length = 650 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 267 FIHEANTEVRKKELFSKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 326 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + V VY + + T D + Q + K ++ + Sbjct: 327 RKGRIERQGNKNPL----VHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 373 >gi|117922220|ref|YP_871412.1| SNF2-like protein [Shewanella sp. ANA-3] gi|117614552|gb|ABK50006.1| SNF2-related protein [Shewanella sp. ANA-3] Length = 1148 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 62/229 (27%), Gaps = 46/229 (20%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEK----------HWKEV 51 K Y + L+ E + + ++ + D + Sbjct: 762 KVYEG---SIESQLENEE---SHVLTTLMRMRDTSLHPRLADGGRLDAPSSKNDLKQIFA 815 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFN-------------------SDLARLQKAFPQ 90 K+K + ++ I+ + KA + Sbjct: 816 ESAKLKKMIEVLTDIQSRREKCIIFAINKRLQRFLSIALGNYFGLGPLHVINGDTKAVVK 875 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + I E+ + L G N +V F W+ + E Sbjct: 876 NKNTANRKSMIAEFEAKEGFNLIIFSPVAAGVGLTVVGANNVVHFERHWNPAK-----EA 930 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQN-TIDE---LVLQRLRTKSTIQDLLL 195 R + G + V VY I + TI+ + + L KS ++D ++ Sbjct: 931 QATDRVYRIGQTKDVNVYVPILHHPTIESFDVNLHRLLSQKSMLKDAVV 979 >gi|242786466|ref|XP_002480811.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] gi|218720958|gb|EED20377.1| SNF2 family helicase/ATPase, putative [Talaromyces stipitatus ATCC 10500] Length = 1481 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDL----ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + L + E A IV + L + +++ + + Sbjct: 1241 RHLMWLREHDPGAKSIVFSQYRDFLGVLANAFSRFKIGFSSVEAKNGIQKFKEDAAAECF 1300 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G R V+ + Sbjct: 1301 LLHARAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRPTTVWMYLV 1354 Query: 173 QNTIDELVLQR 183 +T++E + Q Sbjct: 1355 SDTVEESIYQI 1365 >gi|307108726|gb|EFN56965.1| hypothetical protein CHLNCDRAFT_21780 [Chlorella variabilis] Length = 119 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 13/115 (11%), Positives = 30/115 (26%), Gaps = 17/115 (14%) Query: 70 PIIVAYHFNSDLARL----------QKAFPQGRTLDKDPCTIQ-EWNEGKIPLLFAHPAS 118 ++ + + + L + L + I + + S Sbjct: 9 KALIFSQYVTTIEWLKTRLTQAGFGYRFISGSMPLKQRAKAINAFQQDPPTTVFLLSMRS 68 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 G+NL + + + E + R + G +R V V + Sbjct: 69 GSVGINLTA-ASHVFLMEPALNPAL-----EEQAIGRAWRMGQQRTVTVKKFYVK 117 >gi|258564666|ref|XP_002583078.1| predicted protein [Uncinocarpus reesii 1704] gi|237908585|gb|EEP82986.1| predicted protein [Uncinocarpus reesii 1704] Length = 1355 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + L + A IV + S L ++ + ++D + E + Sbjct: 1111 RHLIWLRHHDPGAKSIVFSQYKSFLGILANAFKRFKIEFSSIDSPDGIERFKKEPSVECF 1170 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G R V+ + Sbjct: 1171 LLHAKAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRETTVWMYLV 1224 Query: 173 QNTIDELVLQR 183 ++++E + Q Sbjct: 1225 SDSVEESIYQI 1235 >gi|218297000|ref|ZP_03497686.1| helicase domain protein [Thermus aquaticus Y51MC23] gi|218242703|gb|EED09239.1| helicase domain protein [Thermus aquaticus Y51MC23] Length = 923 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 4/100 (4%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ E +L A G+NLQ G + +V + L W+ +Q R+ Q Sbjct: 523 RREAVEALMEESPRILVAT-DCVSEGVNLQEGFSAVVHYDLPWNPNRLEQREGRVDRYGQ 581 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++ + V V Y N +DE V++ L K+ L Sbjct: 582 KRP---KVVAVRYRGLDNPVDEKVVEVLLKKAERIREALG 618 >gi|115474095|ref|NP_001060646.1| Os07g0680500 [Oryza sativa Japonica Group] gi|33146657|dbj|BAC80003.1| SNF2/SWI2 family transcription factor-like protein [Oryza sativa Japonica Group] gi|50509527|dbj|BAD31220.1| SNF2/SWI2 family transcription factor-like protein [Oryza sativa Japonica Group] gi|113612182|dbj|BAF22560.1| Os07g0680500 [Oryza sativa Japonica Group] gi|215687240|dbj|BAG91805.1| unnamed protein product [Oryza sativa Japonica Group] Length = 184 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 6/86 (6%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +L +GLNL ++ + E ++R Sbjct: 25 KAKKSFSKMQPAQVLLMLIQHGANGLNLLE-AQHVILVEPLLNPAA-----EAQAISRIH 78 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQR 183 + G ++ F++ I +NTI+E + + Sbjct: 79 RVGQDKSTFIHRFIVKNTIEESIYKL 104 >gi|302063935|ref|ZP_07255476.1| SNF2-related:helicase, C-terminal [Pseudomonas syringae pv. tomato K40] Length = 89 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 6/83 (7%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G NL N + F L W R + G R V V +A +TID+ Sbjct: 3 AGTGYNLTA-ANYVFFLGLPWTPGLQD-----QAEDRAYRNGQLRMVVVKIPLADDTIDQ 56 Query: 179 LVLQRLRTKSTIQDLLLNALKKE 201 + Q L K + L++ +E Sbjct: 57 QLWQMLMDKRALASDLIDLEAEE 79 >gi|169835045|ref|YP_001715648.1| superfamily II DNA/RNA helicase [Clostridium botulinum A3 str. Loch Maree] gi|169409152|gb|ACA57562.1| superfamily II DNA and RNA helicase [Clostridium botulinum A3 str. Loch Maree] Length = 826 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 4/107 (3%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 +T K I + EG I +L + G+N Q + W E Q+ Sbjct: 473 HNAKTPAKKQKLINAFKEGDIRILIGSISKMAEGMNAQDRIIATHELDVPWKPAEIIQLE 532 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 R+ Q V +Y + + T D Q + K+ + + Sbjct: 533 GRMLR----QGNINSKVRIYRYVCKGTFDAFAWQTISRKANFIEQFM 575 >gi|167526014|ref|XP_001747341.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774176|gb|EDQ87808.1| predicted protein [Monosiga brevicollis MX1] Length = 951 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 16/152 (10%), Positives = 46/152 (30%), Gaps = 14/152 (9%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCTIQEWNEGKIPLLF 113 +++ +A ++V ++ L K ++ +I +L Sbjct: 656 LVKHEPSAKVLVFSQWHEVLQLFCKFAEHNGVQTLLMKSGQQGANEVQHFQHDAQIKVLC 715 Query: 114 AHPASCGHGLNLQ-YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G L N ++ + + + R ++ G R V+ L+ Sbjct: 716 LRLSLHGGANGLTLTAANHIILLDAELNPA-----MRAQALARVQRVGQARETHVHQLLI 770 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +++I+ + ++ K + Sbjct: 771 EDSIEMGIFTAAEELHGRGSEVMEGQKTNELE 802 >gi|317496319|ref|ZP_07954676.1| D-tyrosyl-tRNA(Tyr) deacylase [Gemella moribillum M424] gi|316913565|gb|EFV35054.1| D-tyrosyl-tRNA(Tyr) deacylase [Gemella moribillum M424] Length = 1714 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G + +L G G N+Q L + W + +Q Sbjct: 1162 FIHEANSDKQKDELFAKVRKGDVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 1221 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y + +NT D + Q + K ++ + Sbjct: 1222 RAGRIVR----QGNENEKVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 1268 >gi|254241158|ref|ZP_04934480.1| helicase-like protein [Pseudomonas aeruginosa 2192] gi|126194536|gb|EAZ58599.1| helicase-like protein [Pseudomonas aeruginosa 2192] Length = 910 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 10/126 (7%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R + + + + K+ L+ A + GLNLQ G ++ L W+ Sbjct: 734 RSRLYRQGDSVAIERETLKRMVADRKLRLMIAT-DAACEGLNLQTLGTLIN-VDLPWNPT 791 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS----TIQDLLLNAL 198 + +Q I RI Q + V + L+ + T+DE V RL + + L + + Sbjct: 792 KLEQRIGRIKRFGQTRDK----VDMLNLVNEQTVDEKVYDRLSERMKDRFDLFGSLPDTI 847 Query: 199 KKETIH 204 K E I Sbjct: 848 KDEWID 853 >gi|294950395|ref|XP_002786608.1| snf2 histone linker phd ring helicase, putative [Perkinsus marinus ATCC 50983] gi|239900900|gb|EER18404.1| snf2 histone linker phd ring helicase, putative [Perkinsus marinus ATCC 50983] Length = 1367 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 41/110 (37%), Gaps = 11/110 (10%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + +G++ L AS G GLNL + ++ + R + Sbjct: 1263 KMVERFFDGRVRTLLCPLASAGQGLNLTVASHAILLEPPPKYSQTA------QAAARIWR 1316 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQR-----LRTKSTIQDLLLNALKKETI 203 G ++ V++ ++ T++E + + + + + L E + Sbjct: 1317 LGQQKEATVWHFVSCRTVEEAMWTLSRRADQEEDAELLRDIFSGLTGERV 1366 >gi|291544286|emb|CBL17395.1| Helicase conserved C-terminal domain [Ruminococcus sp. 18P13] Length = 390 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 4/98 (4%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++ N GK ++ A ++ G G N+Q + + W + +Q RI Q Sbjct: 5 IFRDINAGKYRVVIASTSTLGTGANVQERLAAVHHVDIPWKPSDFEQREGRILR----QG 60 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V ++ I + T+D + Q + K+ LL+ Sbjct: 61 NSFSEVQIFNYITEGTMDSYLYQVVTDKARFIAQLLDD 98 >gi|253578091|ref|ZP_04855363.1| superfamily II DNA and RNA helicase [Ruminococcus sp. 5_1_39B_FAA] gi|251850409|gb|EES78367.1| superfamily II DNA and RNA helicase [Ruminococcus sp. 5_1_39BFAA] Length = 2587 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +LF G G N+Q + W + +Q Sbjct: 2219 FIHEATTDAQKKELFGKVRSGEVRVLFGSTPKMGAGTNVQDRLIAIHNLDCPWRPSDLEQ 2278 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + +K ++ + Sbjct: 2279 RQGRIER----QGNMFPEVEVYRYVTEQTFDAYLYQLVESKQKFISQIMTS 2325 >gi|257125725|ref|YP_003163839.1| helicase [Leptotrichia buccalis C-1013-b] gi|257049664|gb|ACV38848.1| helicase domain protein [Leptotrichia buccalis C-1013-b] Length = 2131 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + G + +L G G N+Q L + W + +Q Sbjct: 1767 FIHNANSEKQKDELFAKVRTGDVRILLGSTQKMGAGTNVQTKLIALHDLDVPWRPSDLEQ 1826 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 1827 RAGRIVR----QGNENKKVEIYRYVTENTFDAYLWQTIENKQKFISQIMTS 1873 >gi|302908977|ref|XP_003049971.1| hypothetical protein NECHADRAFT_106359 [Nectria haematococca mpVI 77-13-4] gi|256730908|gb|EEU44258.1| hypothetical protein NECHADRAFT_106359 [Nectria haematococca mpVI 77-13-4] Length = 1287 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 10/140 (7%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK---AFPQGRTLDKDPCTIQEW-NEGK 108 D +K L + E A I+ + LA L+ G T D I + + Sbjct: 1053 DTLVKHLLWLRESDPGAKSIIFSQYKGFLAILRNAFSRSRIGFTSIDDANGITRFKEDPS 1112 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + H + GLNL + + + Q I R+ + G + V+ Sbjct: 1113 VECFLLHARAHSSGLNLVN-ASHVFLCEPLLNTALELQAIARVD-----RIGQQHETTVW 1166 Query: 169 YLIAQNTIDELVLQRLRTKS 188 + T++E + + Sbjct: 1167 LYLVTGTVEESIYNLSVQRR 1186 >gi|226355509|ref|YP_002785249.1| hypothetical protein Deide_06480 [Deinococcus deserti VCD115] gi|226317499|gb|ACO45495.1| Conserved hypothetical protein [Deinococcus deserti VCD115] Length = 916 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 8/115 (6%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + T + + +G + LL + GLNLQ N++ L W+ Sbjct: 731 QSGFYDNGDFTGCERQALKDQVRDGTVTLLVGT-DAASEGLNLQRLSNLINI-DLPWNPT 788 Query: 143 EHQQMIERIGVTRQRQAGFKR-AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q RI ++ G K + +Y + Q +I++ V QRL + L Sbjct: 789 RLEQRKGRI-----QRIGQKHSTIRIYNMRYQGSIEDRVHQRLSERFGDIAALFG 838 >gi|154321994|ref|XP_001560312.1| hypothetical protein BC1G_01144 [Botryotinia fuckeliana B05.10] gi|150850391|gb|EDN25584.1| hypothetical protein BC1G_01144 [Botryotinia fuckeliana B05.10] Length = 730 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 52/167 (31%), Gaps = 21/167 (12%) Query: 45 EKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFN-----------SDLARLQKAFP 89 + ++ L + +++ F D + Sbjct: 534 RRPNIVKESGRLSKLMELYRHLTITYPERKMVMFSCFLKFLDVVEEGLLRDYKIQPLRYD 593 Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 D+ P + + E K + A +I++ WW+ + +E Sbjct: 594 GTTPTDQRPKIEEAYGESKSNVPLLMTAGSSSIGLNITSASIVIMCEPWWN-----RNLE 648 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLL 195 + + R + G ++ V +Y N+ ID+ VL K + + L+ Sbjct: 649 KQAIARVYRQGQQKNVLLYRFFGLNSEIDQEVLSVAEAKVAVNEDLM 695 >gi|239826792|ref|YP_002949416.1| helicase [Geobacillus sp. WCH70] gi|239807085|gb|ACS24150.1| helicase domain protein [Geobacillus sp. WCH70] Length = 1062 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 8/102 (7%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++++ ++ + + + P++ A + G +NLQ+ N ++ + + W+ + +Q + RI Sbjct: 518 FSMEERRKQVERF-KHECPIMLAT-DAGGESINLQF-CNQMINYDIPWNPNKLEQRMGRI 574 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G + VFV+ L+A NT + VL L TK Sbjct: 575 -----HRIGQRNEVFVFNLVAGNTREGDVLLTLMTKMEQMRK 611 >gi|284924503|emb|CBG37639.1| putative helicase [Escherichia coli 042] Length = 963 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 60/174 (34%), Gaps = 19/174 (10%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 +++++ Q + + + + + + Sbjct: 427 IFTESMRTQQYLAHFLENNGYQGKVVTFSGTNNTPQANKIYQQW----------REEYQG 476 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +DK I + + ++ A + G+NLQ+ ++L+ + W+ + Sbjct: 477 SSRITGSAQIDKRSALIDHFKD-HAEIMIAT-EAAAEGVNLQF-CSLLINYDFPWNPQRI 533 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 +Q I R + G K V V + +N D+ VL+ L K ++ D + A Sbjct: 534 EQRIGRC-----HRYGQKFDVVVINFLNQRNQADQRVLELLTEKFSLFDGVFGA 582 >gi|295672956|ref|XP_002797024.1| ATP-dependent DNA helicase [Paracoccidioides brasiliensis Pb01] gi|226282396|gb|EEH37962.1| ATP-dependent DNA helicase [Paracoccidioides brasiliensis Pb01] Length = 1480 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 10/135 (7%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGK 108 D + L + + A IV + L ++D T + + Sbjct: 1221 DNLARHLIWLRQHDPGAKSIVFSQYKPFLGILARAFSHFRIGFSSIDYHDGTERFKRDPS 1280 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I H + GLNL + + IE + R + G R V+ Sbjct: 1281 IECFLLHAKAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRETTVW 1334 Query: 169 YLIAQNTIDELVLQR 183 + ++++E + Sbjct: 1335 MYLVSDSVEESIYDI 1349 >gi|159124104|gb|EDP49222.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163] Length = 1483 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 11/152 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK---AFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + + + E A I+ + + L L F G + + I+ + + + Sbjct: 1255 RHILWLREHDPGAKSIIFSQYKTFLEVLGTAFSRFKIGYSSIDNADGIERFKSDPAVECF 1314 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 F H + GLNL + + IE + R + G R V+ + Sbjct: 1315 FLHAKAQSSGLNLVN-ATHVFLCEPLVNTA-----IELQAIARVHRIGQHRPTTVWMYLV 1368 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +T+++ + + ++ + ++ KE + Sbjct: 1369 SDTVEQSIYELSVSRR-LAHIVQKEKVKEALD 1399 >gi|146324369|ref|XP_750547.2| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293] gi|129557212|gb|EAL88509.2| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293] Length = 1461 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 11/152 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK---AFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + + + E A I+ + + L L F G + + I+ + + + Sbjct: 1233 RHILWLREHDPGAKSIIFSQYKTFLEVLGTAFSRFKIGYSSIDNADGIERFKSDPAVECF 1292 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 F H + GLNL + + IE + R + G R V+ + Sbjct: 1293 FLHAKAQSSGLNLVN-ATHVFLCEPLVNTA-----IELQAIARVHRIGQHRPTTVWMYLV 1346 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +T+++ + + ++ + ++ KE + Sbjct: 1347 SDTVEQSIYELSVSRR-LAHIVQKEKVKEALD 1377 >gi|119467932|ref|XP_001257772.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] gi|119405924|gb|EAW15875.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181] Length = 1509 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 11/152 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK---AFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + + + E A I+ + + L L F G + + I+ + + + Sbjct: 1281 RHILWLREHDPGAKSIIFSQYKTFLEVLGTAFSRFKIGYSSIDNADGIERFKSDPAVECF 1340 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 F H + GLNL + + IE + R + G R V+ + Sbjct: 1341 FLHAKAQSSGLNLVN-ATHVFLCEPLVNTA-----IELQAIARVHRIGQHRPTTVWMYLV 1394 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 +T+++ + + ++ + ++ KE + Sbjct: 1395 SDTVEQSIYELSVSRR-LAHIVQKEKVKEALD 1425 >gi|148654631|ref|YP_001274836.1| helicase domain-containing protein [Roseiflexus sp. RS-1] gi|148566741|gb|ABQ88886.1| helicase domain protein [Roseiflexus sp. RS-1] Length = 986 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 4/121 (3%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F A + R+ ++ I E +L A G+NLQ+ + +V + Sbjct: 525 QFERIPAVRVMSVTGERSEEERDMMIAELERSPRRILVAT-DCLSEGINLQHSFDAVVHY 583 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 L W+ +Q R+ Q ++ R V +Y N +DE V++ L K+ L Sbjct: 584 DLPWNPNRLEQREGRVDRYGQ-RSAVVRTVLIY--GQDNPMDEAVMKVLLRKAVRIHKTL 640 Query: 196 N 196 Sbjct: 641 G 641 >gi|21754110|dbj|BAC04459.1| unnamed protein product [Homo sapiens] Length = 131 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 31/89 (34%), Gaps = 6/89 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +I +L + +GL + ++ + Q I R+ Sbjct: 13 QENLSAFKRDPQINILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHELQAIGRV----- 66 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 + G + V+ + + TI+E + L+ Sbjct: 67 HRIGQTKPTIVHRFLIKATIEERMQAMLK 95 >gi|306821025|ref|ZP_07454644.1| conserved hypothetical protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550966|gb|EFM38938.1| conserved hypothetical protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 2662 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G + +L G G N+Q L + W + +Q Sbjct: 2114 FIHEANSDKQKDELFAKLRKGDVRILIGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2173 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y + +NT D + Q + K ++ + Sbjct: 2174 RSGRIIR----QGNENEEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2220 >gi|225680757|gb|EEH19041.1| DNA repair protein rad5 [Paracoccidioides brasiliensis Pb03] Length = 1432 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 10/135 (7%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGK 108 D + L + + A IV + L ++D T + + Sbjct: 1173 DNLARHLIWLRQHDPGAKSIVFSQYKPFLGILARAFSHFKIGFSSIDYHDGTERFKRDPS 1232 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I H + GLNL + + IE + R + G R V+ Sbjct: 1233 IECFLLHAKAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRETTVW 1286 Query: 169 YLIAQNTIDELVLQR 183 + ++++E + Sbjct: 1287 MYLVSDSVEESIYDI 1301 >gi|261329152|emb|CBH12131.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 1612 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 6/78 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +LF GLNL N L+F + +HQQ + RI + Sbjct: 1497 NNRGHVLFLSSRVACSGLNL-VFANRLIFMEPNLNPAQHQQAVGRIDRCG-----QLKRT 1550 Query: 166 FVYYLIAQNTIDELVLQR 183 +VY + A TI+E ++ R Sbjct: 1551 YVYVMYAPRTIEERIMNR 1568 >gi|119596380|gb|EAW75974.1| chromodomain helicase DNA binding protein 6, isoform CRA_a [Homo sapiens] Length = 952 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/186 (11%), Positives = 50/186 (26%), Gaps = 37/186 (19%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + + L N + ++ + N + + Sbjct: 744 KYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP 803 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK- 96 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 804 DAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 863 Query: 97 ---------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 864 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQNDL 922 Query: 146 QMIERI 151 Q+ R+ Sbjct: 923 QVTTRM 928 >gi|72390878|ref|XP_845733.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62175831|gb|AAX69958.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70802269|gb|AAZ12174.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 1541 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 6/78 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +LF GLNL N L+F + +HQQ + RI + Sbjct: 1426 NNRGHVLFLSSRVACSGLNL-VFANRLIFMEPNLNPAQHQQAVGRIDRCG-----QLKRT 1479 Query: 166 FVYYLIAQNTIDELVLQR 183 +VY + A TI+E ++ R Sbjct: 1480 YVYVMYAPRTIEERIMNR 1497 >gi|310831061|ref|YP_003969704.1| putative superfamily II helicase [Cafeteria roenbergensis virus BV-PW1] gi|309386245|gb|ADO67105.1| putative superfamily II helicase [Cafeteria roenbergensis virus BV-PW1] Length = 773 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 49/134 (36%), Gaps = 14/134 (10%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARL---------QKAFPQGRTLDKDPCTIQEWN 105 KI + II+K + I+ H++ + + +G + Sbjct: 643 KISYVMDIIKKEPDSRFIIFSHWDKMFKMISQVFDTNNIKYVNIKGNMHKIANSIRKFKI 702 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + +I ++ G NL N ++F ++ + + V R + G + + Sbjct: 703 DNEIKVIMLSSDKANSGCNLTE-ANHIIFLDNYYLTNDTIK----QSVGRAHRIGQTKKL 757 Query: 166 FVYYLIAQNTIDEL 179 V LI +NT+++ Sbjct: 758 KVTRLIMENTLEDK 771 >gi|87198378|ref|YP_495635.1| helicase-like [Novosphingobium aromaticivorans DSM 12444] gi|87134059|gb|ABD24801.1| helicase-like protein [Novosphingobium aromaticivorans DSM 12444] Length = 933 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 19/179 (10%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN--------- 78 + + QL + A + E + ++ + K A P+I F Sbjct: 437 EIAELRQLISKAEGLNSRFADDPKFRELVAQVKDLTGKKEARPVI-FCRFIATAEAVGEA 495 Query: 79 ---SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + T ++ ++ + +L A G+NLQ N +V + Sbjct: 496 LRSRFKSHTVEVVTGRLTPEERRERVEALEDHPNRILVAT-DCLSEGINLQSLFNAVVHY 554 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDL 193 L W+ HQQ R+ Q V+ + N+ ID V++ + K Sbjct: 555 DLNWNPTRHQQRDGRVDRFGQ----QAERVWSVMMFGANSIIDGAVIKVITEKMKRIQK 609 >gi|301057976|ref|ZP_07199033.1| helicase C-terminal domain protein [delta proteobacterium NaphS2] gi|300447943|gb|EFK11651.1| helicase C-terminal domain protein [delta proteobacterium NaphS2] Length = 164 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 9/91 (9%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ + + + + G+NLQ+ ++++ F L W+ + +Q I R Sbjct: 81 RTAIIEHFRDNAS--ILIATEAAAEGINLQF-CSLVINFDLPWNPQRIEQRIGRC----- 132 Query: 157 RQAGFKRAVFVYYLIAQ-NTIDELVLQRLRT 186 + G K V V + + N D V + L Sbjct: 133 HRYGQKHDVVVINFLNERNAADRRVYELLNE 163 >gi|54026418|ref|YP_120660.1| putative helicase [Nocardia farcinica IFM 10152] gi|54017926|dbj|BAD59296.1| putative helicase [Nocardia farcinica IFM 10152] Length = 1136 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 61/198 (30%), Gaps = 28/198 (14%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 + +L+ + +QLA +++ W E+ Sbjct: 442 QTVAELE-------TELRELAGLIQLAKQVRDRGDDRKWSELSRILQDEGLTNDSSGRPR 494 Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI--------------QEWNEGKIPLLFAH 115 +I+ L L+ I + +L A Sbjct: 495 KLIIFTEHRDTLEYLRGRIGSLLGRPDAVQVIHGGVRRGERRRITEEFTKNRDCRILLAT 554 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 A+ GLNLQ +++V + L W+ +Q RI + G + ++ L+A NT Sbjct: 555 DAAG-EGLNLQA-AHLMVNYDLPWNPNRIEQRFGRI-----HRIGQEEVCRLWNLVALNT 607 Query: 176 IDELVLQRLRTKSTIQDL 193 + V RL K Q Sbjct: 608 REGEVFARLLEKIEEQRK 625 >gi|320527864|ref|ZP_08029032.1| hypothetical protein HMPREF9430_01145 [Solobacterium moorei F0204] gi|320131801|gb|EFW24363.1| hypothetical protein HMPREF9430_01145 [Solobacterium moorei F0204] Length = 2915 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G++ +L G G N+Q L + W + +Q Sbjct: 2363 FIHEANSDKQKEELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2422 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y + +NT D + Q + K ++ + Sbjct: 2423 RAGRIVR----QGNENEKVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2469 >gi|317055081|ref|YP_004103548.1| SNF2-like protein [Ruminococcus albus 7] gi|315447350|gb|ADU20914.1| SNF2-related protein [Ruminococcus albus 7] Length = 305 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKH 47 + Y + +R+L +I+A N+AS + K LQ+ANGAV + Sbjct: 259 RLYDQMKRDLIIPTDDGDIDAANAASLSNKLLQMANGAVMQGWNQP 304 >gi|268611923|ref|ZP_06145650.1| putative helicase [Ruminococcus flavefaciens FD-1] Length = 628 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + + G+I +L A G G N+Q + + W + +Q Sbjct: 233 YIHDAKTEQQKADLFDKVRSGEILVLLGSTAKMGTGTNVQKKLIAVHDLDIPWRPADLEQ 292 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V ++ + + T D Q L K ++ + Sbjct: 293 RAGRIIR----QGNENKQVQIFRYVTKGTFDAYSYQTLENKQKFISQIMTS 339 >gi|76154388|gb|AAX25878.2| SJCHGC08203 protein [Schistosoma japonicum] Length = 190 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/187 (11%), Positives = 50/187 (26%), Gaps = 43/187 (22%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDE----------------------------EKH 47 + + ++ ++ N + E Sbjct: 1 KKGKGGCRTLMNTIMQLRKICNHPFMFPHIEMAIAEQNFLNIHNGNPPPSLPVPTQVEGK 60 Query: 48 WKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD---------- 95 K + L+ I+ K +++ S + +Q F Sbjct: 61 ILYRSSGKFELLDRILPKLKCCGHRVLIFCQMTSLMTIMQDYFDYRNFRYLRLDGTTRSE 120 Query: 96 KDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N+ I + + G GLNLQ + ++ F W+ + Q +R Sbjct: 121 DRGELLVKFNDTSEDIFIFLLSTRAGGLGLNLQA-ADTVIIFDSDWNPHQDLQAQDRAHR 179 Query: 154 TRQRQAG 160 Q+ Sbjct: 180 IGQQMRF 186 >gi|322780853|gb|EFZ10082.1| hypothetical protein SINV_14375 [Solenopsis invicta] Length = 244 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/189 (10%), Positives = 49/189 (25%), Gaps = 38/189 (20%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y ++ G + ++ + N A + +E +E + Sbjct: 69 KNYEALRK-------GVKGSTTTFLNIVIELKKCCNHAFLTKPIEAEREKTNEDYLQQLI 121 Query: 62 -------------IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------P 98 + + +++ L L + + + Sbjct: 122 RGSGKLVLLDKLLVRLRDTGHRVLIFSQMVKMLDILGEYLQRRHFPFQRLDGSIKGELRK 181 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + +N + G G+NL + ++ F W+ + + R Sbjct: 182 QALDHFNAEGSQDFCFLLSTRAGGLGINL-ATADTVIIFDSDWNPQN-----DLQAQARA 235 Query: 157 RQAGFKRAV 165 + G K V Sbjct: 236 HRIGQKNKV 244 >gi|290969266|ref|ZP_06560791.1| SNF2 family protein [Megasphaera genomosp. type_1 str. 28L] gi|290780772|gb|EFD93375.1| SNF2 family protein [Megasphaera genomosp. type_1 str. 28L] Length = 2905 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G+I +L G G N+Q L + W + +Q Sbjct: 2353 FIHEANSDKQKDELFAKVRKGEIRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2412 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2413 RAGRIVR----QGNENKEVSIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2459 >gi|160946660|ref|ZP_02093863.1| hypothetical protein PEPMIC_00618 [Parvimonas micra ATCC 33270] gi|158447044|gb|EDP24039.1| hypothetical protein PEPMIC_00618 [Parvimonas micra ATCC 33270] Length = 2913 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G+I +L G G N+Q L + W + +Q Sbjct: 2361 FIHEANSDKQKDELFAKVRKGEIRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2420 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2421 RAGRIVR----QGNENKEVSIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2467 >gi|219117189|ref|XP_002179389.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409280|gb|EEC49212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1843 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 40/128 (31%), Gaps = 13/128 (10%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCT-------IQEWNEGKIPLL 112 +++ + IV + + Q+A + +++ +L Sbjct: 1678 DIMDVQDKGEKSIVFSQWEDMIDICQQALEDNAVGYTRARSLKDLSGSVRDLQSVGCDVL 1737 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + GL + + + + + + R + G R +V+ I Sbjct: 1738 LLNVKKAAEGLTILE-ASHVFLVEPLLNHSL-----DSQALARINRIGQTRKTYVHRYIM 1791 Query: 173 QNTIDELV 180 ++TI+ + Sbjct: 1792 EDTIEVKI 1799 >gi|145345811|ref|XP_001417393.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577620|gb|ABO95686.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 2017 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 6/93 (6%) Query: 95 DKDPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + E+ + + LL G NL + + L + + Sbjct: 1915 HQQTGALDEFQKENLKKDDARVLLLLSRDESASGANLTTANHAIFVHPLLTNTAQEYIAS 1974 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 E + R R+ G +R V ++ IA++++D +L Sbjct: 1975 ETQAIGRIRRYGQQREVRIWRFIARDSVDSEIL 2007 >gi|301623129|ref|XP_002940874.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Xenopus (Silurana) tropicalis] Length = 1954 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 22/48 (45%) Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 I +R + G V +Y + + +++E + Q + K + L++ Sbjct: 1100 IFSQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1147 >gi|222637695|gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japonica Group] Length = 1663 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 6/74 (8%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L +GLNL ++ + E ++R + G ++ F++ Sbjct: 1516 QVLLMLIQHGANGLNLLE-AQHVILVEPLLNPAA-----EAQAISRIHRVGQDKSTFIHR 1569 Query: 170 LIAQNTIDELVLQR 183 I +NTI+E + + Sbjct: 1570 FIVKNTIEESIYKL 1583 >gi|108802453|ref|YP_642649.1| helicase-like protein [Mycobacterium sp. MCS] gi|119855279|ref|YP_935882.1| helicase domain-containing protein [Mycobacterium sp. KMS] gi|108772872|gb|ABG11593.1| helicase-like protein [Mycobacterium sp. MCS] gi|119697996|gb|ABL95067.1| helicase domain protein [Mycobacterium sp. KMS] Length = 1069 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 46/102 (45%), Gaps = 8/102 (7%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + + ++ + + G ++ + G++LQ ++LV + + W L + Sbjct: 490 QMYSGRQSKPDRDEVRKAFMRGDFQIIV-TTDAGNEGIDLQA-AHVLVNYDIPWSLVRLE 547 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTID-ELVLQRLRT 186 Q + RI + G +R V +Y L+A +T + E +L+ L Sbjct: 548 QRMGRI-----HRVGQQREVHLYNLVATDTREGETLLRLLDN 584 >gi|254523728|ref|ZP_05135783.1| putative DNA methylase [Stenotrophomonas sp. SKA14] gi|219721319|gb|EED39844.1| putative DNA methylase [Stenotrophomonas sp. SKA14] Length = 4560 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 5/105 (4%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + +K N +I ++ AS G G+N+Q + W + +Q R Sbjct: 2616 STSKEKRKEVADRMNRSEIRVVIGSTASLGVGVNMQRNLRAMHHLDAPWMPGDLEQRNGR 2675 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q V Y + + +D Q L K L Sbjct: 2676 GHR----QGNQWNTVLEYRYLT-DRLDGRRWQVLAVKDRFIKAFL 2715 >gi|323448985|gb|EGB04877.1| hypothetical protein AURANDRAFT_1482 [Aureococcus anophagefferens] Length = 411 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 7/112 (6%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F + I+ + + + +C +GLN+ + ++F Sbjct: 306 FQKIKGATTIRVDGSVPGAQREERIKRFKTDATCRVALLSMGTCSNGLNMTE-ASTILFA 364 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + W +H Q +RI + A +YY + N++ + +RL+ K Sbjct: 365 EMTWSPTDHMQAEDRI-----HRVSQTNACNIYYAMLPNSLGSFMFRRLQAK 411 >gi|284005657|ref|YP_003391477.1| Methyltransferase type 11 [Spirosoma linguale DSM 74] gi|283820841|gb|ADB42678.1| Methyltransferase type 11 [Spirosoma linguale DSM 74] Length = 1674 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 53/184 (28%), Gaps = 4/184 (2%) Query: 16 QGENIEAFN-SASKTVKCLQLANGAVYYD-EEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 + E N +A++ ++ QL++ + + + + Sbjct: 1225 EDEPGSKLNRAAAEILRLYQLSDSYKGTQLVFADVYQSPANLFADEDERLCVGARFNLFD 1284 Query: 74 AYHFN--SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 ++ + DK + G++ ++ G G+N+Q Sbjct: 1285 DLKMKLVAEGIPACEVAVCPAEADKREAVFAKVRTGEVRVMLGTSERMGVGVNVQERLVG 1344 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 L + +Q RI A + + + T+D RL K Sbjct: 1345 LHHLDAPNRPTDFEQRNGRIIRQGNAHAAWNMPIEILTYGVDKTLDATAYGRLAIKQKFI 1404 Query: 192 DLLL 195 + +L Sbjct: 1405 NQVL 1408 >gi|134084700|emb|CAK47319.1| unnamed protein product [Aspergillus niger] Length = 1485 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 49/149 (32%), Gaps = 11/149 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK----AFPQGRTLDKDPCTIQEWNEGKIPLL 112 + + + E A +V + + L L ++D ++ + Sbjct: 1247 RHILWLREHDPGAKSVVFSQYKNFLEILANALSRFKIGFSSVDAKDGIQNFKSDPAVECF 1306 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G R V+ + Sbjct: 1307 LLHAKAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRPTTVWMYLV 1360 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +T+++ + ++ + ++ K+E Sbjct: 1361 SDTVEQSIYDLSVSRR-LAHIVQKEKKQE 1388 >gi|94985644|ref|YP_605008.1| helicase-like protein [Deinococcus geothermalis DSM 11300] gi|94555925|gb|ABF45839.1| helicase-like protein [Deinococcus geothermalis DSM 11300] Length = 933 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 18/143 (12%) Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGR------------TLDKDPCTIQEWNEGKIPLLFA 114 + IV F + + +A G + ++ + + + +L A Sbjct: 476 SGHHPIVFCRFIATAEYVAQALRSGLDGVEVRAVTGRLSPEEREAVVADLATAERRILVA 535 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI-AQ 173 G+NLQ + ++ + L W+ +Q R+ Q +AV V L A Sbjct: 536 T-DCLSEGINLQQDFSAVIHYDLPWNPTRLEQREGRVDRYGQP----SKAVKVVTLYGAD 590 Query: 174 NTIDELVLQRLRTKSTIQDLLLN 196 N ID ++L+ L K L Sbjct: 591 NRIDRIILEVLVRKHRTIRGTLG 613 >gi|325089460|gb|EGC42770.1| ATP-dependent DNA helicase [Ajellomyces capsulatus H88] Length = 1490 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFN---SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + L + + A IV + L R F G + ++++ + + Sbjct: 1240 RHLIWLRQHDPGAKSIVFSQYKPFLGILGRAFSHFKIGYSSIDSSDGVEQFKTDPSVECF 1299 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G K+ V+ + Sbjct: 1300 LLHAKAYSSGLNL-INATHVFLCEPLINTA-----IELQAIARVHRIGQKQETTVWMYLV 1353 Query: 173 QNTIDELVLQR 183 ++++E + Sbjct: 1354 SDSVEESIYDI 1364 >gi|307244421|ref|ZP_07526532.1| putative D-tyrosyl-tRNA(Tyr) deacylase [Peptostreptococcus stomatis DSM 17678] gi|306492240|gb|EFM64282.1| putative D-tyrosyl-tRNA(Tyr) deacylase [Peptostreptococcus stomatis DSM 17678] Length = 2967 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G+I +L G G N+Q L + W + +Q Sbjct: 2415 FIHEANSDKQKDELFAKVRKGEIRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2474 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y + +NT D + Q + K ++ + Sbjct: 2475 RSGRIVR----QGNENNEVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2521 >gi|289423014|ref|ZP_06424834.1| superfamily II DNA and RNA helicase [Peptostreptococcus anaerobius 653-L] gi|289156588|gb|EFD05233.1| superfamily II DNA and RNA helicase [Peptostreptococcus anaerobius 653-L] Length = 2659 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G++ +L G G N+Q + + W + +Q Sbjct: 2229 FIHEANSDKQKDELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIAMHDLDVPWRPADLEQ 2288 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V +Y + +NT D + Q + K ++ + Sbjct: 2289 RSGRIVR----QGNENKEVSIYRYVTENTFDSYLWQTIENKQKFISQIMTS 2335 >gi|312966020|ref|ZP_07780246.1| putative helicase [Escherichia coli 2362-75] gi|312289263|gb|EFR17157.1| putative helicase [Escherichia coli 2362-75] Length = 963 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 61/174 (35%), Gaps = 19/174 (10%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 +++++ Q + + + + + + Sbjct: 427 IFTESMRTQQYLAHFLENNGYQGKVVTFSGTNNTPQANKIYQQW----------REEYQG 476 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +DK I + + ++ A + G+NLQ+ ++L+ + L W+ + Sbjct: 477 SSRITGSAQIDKRSALIDHFKD-HAEIMIAT-EAAAEGVNLQF-CSLLINYDLPWNPQRI 533 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 +Q I R + G K V V + +N D+ VL+ L K ++ D + A Sbjct: 534 EQRIGRC-----HRYGQKFDVVVINFLNQRNQADQRVLELLTEKFSLFDGVFGA 582 >gi|255102544|ref|ZP_05331521.1| putative conjugative transposon DNA recombination protein [Clostridium difficile QCD-63q42] Length = 2872 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G++ +L G G N+Q L + W + +Q Sbjct: 2318 FIHEANSDKQKDELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2377 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y I +NT D + Q + K ++ + Sbjct: 2378 RSGRIVR----QGNENNEVNIYRYITENTFDAYLWQTIENKQKFISQIMTS 2424 >gi|322412357|gb|EFY03265.1| helicase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 1998 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 4/91 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T DK ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1902 FVHDANTDDKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1961 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 R+ Q + V +Y+ I + + D Sbjct: 1962 RNGRLIR----QGNMHQEVDIYHYITKGSFD 1988 >gi|310792778|gb|EFQ28239.1| DNA repair protein RAD8 [Glomerella graminicola M1.001] Length = 1481 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 14/154 (9%) Query: 45 EKHWKEVHDEKIKALEVIIEKANAA--PIIVAYHFNSDLARLQKAFPQGRTL-------- 94 + + V KI +E II +++ + + + G Sbjct: 1273 DTDLEAVPSSKILEIENIILDEVGDDEKVLIFAAYAGIKSEIHTQLFDGVDDSIGVYMTD 1332 Query: 95 --DKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 D+D TI + + + +L S N ++F + + ++ M Sbjct: 1333 GGDQDSQTIDSFKKHQGKAVLIQSLMSSESAGTNLTEANHVIFAGVLFTDSDNYTMYMNQ 1392 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVL-QRL 184 R + G R V +Y+L++ T++ + QR Sbjct: 1393 AKGRVIRQGQTRKVAIYHLVSPGTLEFDIFNQRQ 1426 >gi|38491999|gb|AAM03043.3| hypothetical protein [Helicobacter pylori] Length = 2879 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ + N G++ +L PA G G N+Q + W +E Q Sbjct: 2373 FIHDAKTEEQKQDLFKRVNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 2432 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 2433 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2488 >gi|240144863|ref|ZP_04743464.1| SNF2 family protein [Roseburia intestinalis L1-82] gi|257203086|gb|EEV01371.1| SNF2 family protein [Roseburia intestinalis L1-82] Length = 641 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + G++ L A G G N+Q L + W + +Q Sbjct: 193 FIHDANTEKRKAELFAKVRSGQVRFLLGSTAKMGAGTNVQDRLIALHHLDVPWRPSDIEQ 252 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + + T D Q + K ++ + Sbjct: 253 QEGRILR----QGNMNDKVKIFRYVTEGTFDSYSWQLIENKQKFIGQIMTS 299 >gi|317009412|gb|ADU79992.1| adenine specific DNA methyltransferase [Helicobacter pylori India7] Length = 2866 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G+I +L PA G G N+Q + W +E Q Sbjct: 2360 FIHDAKTEEQKQDLFKKLNRGEIRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 2419 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 2420 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2475 >gi|157158933|ref|YP_001465831.1| type III restriction enzyme, res subunit [Escherichia coli E24377A] gi|300938291|ref|ZP_07153056.1| protein, SNF2 family [Escherichia coli MS 21-1] gi|157080963|gb|ABV20671.1| type III restriction enzyme, res subunit [Escherichia coli E24377A] gi|300456746|gb|EFK20239.1| protein, SNF2 family [Escherichia coli MS 21-1] Length = 963 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 61/174 (35%), Gaps = 19/174 (10%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 +++++ Q + + + + + + Sbjct: 427 IFTESMRTQQYLAHFLENNGYQGKVVTFSGTNNTPQANKIYQQW----------REEYQG 476 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +DK I + + ++ A + G+NLQ+ ++L+ + L W+ + Sbjct: 477 SSRITGSAQIDKRSALIDHFKD-HAEIMIAT-EAAAEGVNLQF-CSLLINYDLPWNPQRI 533 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 +Q I R + G K V V + +N D+ VL+ L K ++ D + A Sbjct: 534 EQRIGRC-----HRYGQKFDVVVINFLNQRNQADQRVLELLTEKFSLFDGVFGA 582 >gi|75759221|ref|ZP_00739322.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493284|gb|EAO56399.1| SWF/SNF family helicase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 824 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 34/120 (28%), Gaps = 17/120 (14%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV--HDEKIKA 58 Y + ++ +++G K Q+ N Y +E+ + V K K Sbjct: 695 LYEQLVQDTLQNVEGLSGIERRGFILLMLNKLKQICNHPALYLKEEEPQNVVERSMKTKT 754 Query: 59 LEVII--EKANAAPIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWN 105 L +I K ++ + L++ I+E+ Sbjct: 755 LMELIENIKDQNESCLIFTQYIGMGNMLKRVLEEQFGQRVLFLNGSVPKKNRDKMIEEFQ 814 >gi|226292448|gb|EEH47868.1| ATP-dependent DNA helicase [Paracoccidioides brasiliensis Pb18] Length = 1440 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 10/135 (7%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGK 108 D + L + + A IV + L ++D T + + Sbjct: 1181 DNLARHLIWLRQHDPGAKSIVFSQYKPFLGILARAFSHFKIGFSSIDYHDGTERFKRDPS 1240 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 I H + GLNL + + IE + R + G R V+ Sbjct: 1241 IECFLLHAKAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRETTVW 1294 Query: 169 YLIAQNTIDELVLQR 183 + ++++E + Sbjct: 1295 MYLVSDSVEESIYDI 1309 >gi|319744479|gb|EFV96836.1| SNF2 family protein [Streptococcus agalactiae ATCC 13813] Length = 1998 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 4/91 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 1902 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 1961 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 R+ Q + V +Y+ I + + D Sbjct: 1962 RNGRLIR----QGNMHQEVDIYHYITKGSFD 1988 >gi|18390848|ref|NP_563806.1| MOM (MORPHEUS MOLECULE) [Arabidopsis thaliana] gi|30680475|ref|NP_849608.1| MOM (MORPHEUS MOLECULE) [Arabidopsis thaliana] gi|75185434|sp|Q9M658|MOM1_ARATH RecName: Full=Helicase protein MOM1; AltName: Full=Protein MAINTENANCE OF METHYLATION; AltName: Full=Protein MORPHEUS MOLECULE 1 gi|8132770|gb|AAF73381.1| MOM [Arabidopsis thaliana] gi|332190115|gb|AEE28236.1| ATP-dependent helicase family protein [Arabidopsis thaliana] gi|332190116|gb|AEE28237.1| ATP-dependent helicase family protein [Arabidopsis thaliana] Length = 2001 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 57/193 (29%), Gaps = 29/193 (15%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYH------------- 76 QL + E + K+ L+ ++ N +V Y Sbjct: 537 LKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQATQTPEGLLLGNI 596 Query: 77 ---FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 F + + K+ E + +L +C + L + + Sbjct: 597 LEDFVGQRFGPKSYEHGIYSSKKNSAINNFNKESQCCVLLLETRACSQTIKLLR-ADAFI 655 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL--VLQRLRTKSTIQ 191 F + + +E+I + + ++ L + T++E +L R + Q Sbjct: 656 LFGSSLNPSHDVKHVEKIKIESCSER-----TKIFRLYSVCTVEEKALILARQNKR---Q 707 Query: 192 DLLLNALKKETIH 204 + + L + H Sbjct: 708 NKAVENLNRSLTH 720 >gi|327348280|gb|EGE77137.1| hypothetical protein BDDG_00074 [Ajellomyces dermatitidis ATCC 18188] Length = 1438 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 21/161 (13%) Query: 57 KALEVIIEKANAAPIIVAYHFN---SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + L + + A IV + LAR F G + ++ + + I Sbjct: 1174 RHLIWLRQHDPGAKSIVFSQYKPFLGILARAFSHFKIGFSSIDSHDGVERFKSDPSIECF 1233 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G R V+ + Sbjct: 1234 LLHAKAHASGLNL-INATHVFLCEPLINTA-----IELQAIARVHRIGQHRETTVWMYLV 1287 Query: 173 QNTIDELVLQR--------LRTKSTIQDLLLNALKKETIHV 205 ++++E + + K + E + + Sbjct: 1288 SDSVEECIYDISVSRRLAHIAQKRKQDG---EKFRGEDLEM 1325 >gi|326426459|gb|EGD72029.1| hypothetical protein PTSG_00045 [Salpingoeca sp. ATCC 50818] Length = 1978 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 49/153 (32%), Gaps = 16/153 (10%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR------- 92 + V + + + + +IV F L + A + Sbjct: 1744 FELKMNTKAQHVLKRLREWQDELEPENKQLKVIVFSQFRDTLNIIGDAIIRTYGSQSVAE 1803 Query: 93 --TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + + + + +L GL+L + ++++ E + E Sbjct: 1804 YWSSYRVGELERFRTQAACKVLLLSTD-GAVGLDLHFVTHLVLMD------EIFDRAKEE 1856 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 + R + G R+V V LI + T++E + + Sbjct: 1857 QVIARAWRLGNDRSVVVEQLILRGTVEETLHEL 1889 >gi|302339016|ref|YP_003804222.1| DNA methylase N-4/N-6 domain protein [Spirochaeta smaragdinae DSM 11293] gi|301636201|gb|ADK81628.1| DNA methylase N-4/N-6 domain protein [Spirochaeta smaragdinae DSM 11293] Length = 837 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 56/150 (37%), Gaps = 13/150 (8%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQ------KAFPQGRTLDKDPCTIQEWNEGK 108 ++ + II+ + I+ + ++ ++ + + ++ +++GK Sbjct: 301 RVAKMREIIDADPDSHYIIWHDLEAERHAIKKALPESRWIYGSQKEEERAENAIGFSDGK 360 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L P G G N QY + +F + + + Q + RI + V ++ Sbjct: 361 FKYLSTKPEISGSGANFQYHCHKAIFLGIGYKFNDFIQAVHRI-----YRFLQSEQVEIH 415 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + ++ + + + L K L++ + Sbjct: 416 IIYTES--ERSIYETLMHKWEQHRRLVDMM 443 >gi|224077876|ref|XP_002305447.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222848411|gb|EEE85958.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 630 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 6/103 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ + N + F +CG G++L G + ++ + + Sbjct: 491 SSSDHREWSMERFNNSMDAKVFFGSIKACGEGISL-VGASRIIILDVHLNPSVTC----- 544 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + R + G + V+ Y L+A ++ +E K I + Sbjct: 545 QAIGRAFRPGQTKKVYAYRLVAADSPEEEDHTTCFRKEAIAKM 587 >gi|28603792|ref|NP_788839.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Bos taurus] gi|60390964|sp|Q9TTA5|SMAL1_BOVIN RecName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; AltName: Full=HepA-related protein; AltName: Full=Sucrose nonfermenting protein 2-like 1 gi|6651385|gb|AAF22285.1|AF173643_1 DNA-dependent ATPase A [Bos taurus] gi|296490282|gb|DAA32395.1| SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Bos taurus] Length = 941 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 49/132 (37%), Gaps = 7/132 (5%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-KDPCTIQEWNEGKIPLLFAHPAS 118 E + A+ ++ A + R+Q G T + ++ + + Sbjct: 723 EKFLVFAHHKVVLDAITKELERKRVQHIRIDGSTSSADRETSASSFSCPRALRGVLSITA 782 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GL +++VF L+W+ R + G +V ++YL+A+ T D+ Sbjct: 783 ANMGLTF-SSADLVVFGELFWNPGVLM-----QAEDRVHRIGQLSSVSIHYLVARGTADD 836 Query: 179 LVLQRLRTKSTI 190 + ++ K + Sbjct: 837 YLWPLIQEKIKV 848 >gi|164660184|ref|XP_001731215.1| hypothetical protein MGL_1398 [Malassezia globosa CBS 7966] gi|159105115|gb|EDP44001.1| hypothetical protein MGL_1398 [Malassezia globosa CBS 7966] Length = 713 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 47/176 (26%), Gaps = 40/176 (22%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVH-------------------DEKIKALEVIIEKA 66 +L N + + K+ LE + Sbjct: 534 LKAIGILKKLCNHPDLLNLPADLEGSEELYPEGYRPGDRRNVAVGLSGKLAVLERFLTSM 593 Query: 67 ---NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIP--L 111 I++ ++ L ++ ++K + +N + + Sbjct: 594 RAKTDDKIVLISNYTQTLDLFERLCRSRRWGFFRLDGTMNINKRQNLVDRFNNPEGSEFI 653 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + G GLNL G N LV F W+ Q + R + G K++ Sbjct: 654 FLLSSKAGGCGLNL-IGANRLVLFDPDWNPASDQ-----QALARVWRDGQKKSCTY 703 >gi|255657327|ref|ZP_05402736.1| putative conjugative transposon DNA recombination protein [Clostridium difficile QCD-23m63] Length = 2995 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G++ +L G G N+Q L + W + +Q Sbjct: 2441 FIHEANSDKQKDELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2500 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y I +NT D + Q + K ++ + Sbjct: 2501 RSGRIVR----QGNENNEVNIYRYITENTFDAYLWQTIENKQKFISQIMTS 2547 >gi|156054460|ref|XP_001593156.1| hypothetical protein SS1G_06078 [Sclerotinia sclerotiorum 1980] gi|154703858|gb|EDO03597.1| hypothetical protein SS1G_06078 [Sclerotinia sclerotiorum 1980 UF-70] Length = 1270 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 11/138 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + + + E + IV F L + ++DK N+ I + Sbjct: 1045 RHILYLRESDPGSKSIVFSQFAEFLPILARAFRVFRIGHASIDKPNGIEIFKNDPNIEVF 1104 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GL L + + + E V R + G VY I Sbjct: 1105 LLHSRAHSAGLTLVN-ASHVFICEPLLNTAL-----EIQAVARVDRIGQLVDTNVYLHII 1158 Query: 173 QNTIDELVLQRLRTKSTI 190 NT+++ + + L K + Sbjct: 1159 GNTVEQSIYE-LSVKRRL 1175 >gi|293476568|ref|ZP_06664976.1| SNF2 family Superfamily II DNA/RNA helicase [Escherichia coli B088] gi|291321021|gb|EFE60463.1| SNF2 family Superfamily II DNA/RNA helicase [Escherichia coli B088] Length = 963 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 61/174 (35%), Gaps = 19/174 (10%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 +++++ Q + + + + + + Sbjct: 427 IFTESMRTQQYLAHFLENNGYQGKVVTFSGTNNTPQANKIYQQW----------REEYQG 476 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 +DK I + + ++ A + G+NLQ+ ++L+ + L W+ + Sbjct: 477 SSRITGSAQIDKRSALIDHFKD-HAEIMIAT-EAAAEGVNLQF-CSLLINYDLPWNPQRI 533 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIA-QNTIDELVLQRLRTKSTIQDLLLNA 197 +Q I R + G K V V + +N D+ VL+ L K ++ D + A Sbjct: 534 EQRIGRC-----HRYGQKFDVVVINFLNQRNQADQRVLELLTEKFSLFDGVFGA 582 >gi|315222575|ref|ZP_07864464.1| conserved hypothetical protein [Streptococcus anginosus F0211] gi|315188261|gb|EFU21987.1| conserved hypothetical protein [Streptococcus anginosus F0211] Length = 2924 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G+I +L G G N+Q L + W + +Q Sbjct: 2372 FIHEANSDKQKDELFAKVRKGEIRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2431 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y + +NT D + Q + K ++ + Sbjct: 2432 RAGRIVR----QGNENEKVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2478 >gi|312793798|ref|YP_004026721.1| helicase domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180938|gb|ADQ41108.1| helicase domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 889 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 10/118 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + +GKI L+ + GLNLQ G ++ L W+ +Q RI Sbjct: 730 YSKVERDEIKELVLDGKIRLMIGT-DAAAEGLNLQTLGTLIN-VDLPWNPIRLEQRQGRI 787 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL----KKETIHV 205 Q V+VY L +++I++ + L + ++ +L K E + + Sbjct: 788 RRIGQ----QFDKVYVYNLRYKDSIEDKIHAVLSGRIKATYDMIGSLPEIIKDEWMEI 841 >gi|295835438|ref|ZP_06822371.1| helicase [Streptomyces sp. SPB74] gi|295825492|gb|EDY43404.2| helicase [Streptomyces sp. SPB74] Length = 1741 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 34/104 (32%), Gaps = 4/104 (3%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T +K Q N G I +L G G N Q L+ W Sbjct: 215 QFAQDNATPEKKAAMSQAANHGGIAVLMGSTEVLGTGFNGQNRAYALMHLDQDWTPASMI 274 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q RI V VY+L + ++D + L +K+ Sbjct: 275 QRNGRIVRP----GNQHEEVNVYFLATKGSMDAWQVGLLTSKAE 314 >gi|203454739|ref|YP_002225055.1| gp176 [Mycobacterium phage Myrna] gi|197311787|gb|ACH62145.1| gp176 [Mycobacterium phage Myrna] Length = 618 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 18/171 (10%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFN-------SDLARL 84 Q+A A E H E H KI L +++ + H+ S R+ Sbjct: 424 QIA--ADIMAEHPHLAEGHAPKIDLLNEMLDGIAEQYDQAVCFVHWTTGGLHLISPKLRV 481 Query: 85 QKAFPQGRTLDKD--PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + G + + + + F + GL+ Q ++ D + Sbjct: 482 RHVKHWGTGQSRRLSQKAVDTFKAQPNVVAFLSSDAGALGLSFQN-ARYVINIDPIRDYD 540 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 Q +RI G V +I +++++E + + + + Sbjct: 541 LLTQRNKRIDRADSYLEGLTSYV----MITEDSVEERIWHICQARMRLSAA 587 >gi|154483947|ref|ZP_02026395.1| hypothetical protein EUBVEN_01654 [Eubacterium ventriosum ATCC 27560] gi|149734989|gb|EDM50875.1| hypothetical protein EUBVEN_01654 [Eubacterium ventriosum ATCC 27560] Length = 2219 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + +E GK +L CG G+N+Q + W +Q Sbjct: 1833 FIHDAKTDAQRDILFKEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHIDCPWKPSSIEQ 1892 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V VY + + T D + K ++ + Sbjct: 1893 REGRGIR----QGNLNEEVAVYRYVTKETFDAYSWSLVENKQRFISQVMTS 1939 >gi|15611993|ref|NP_223645.1| hypothetical protein jhp0928 [Helicobacter pylori J99] gi|4155507|gb|AAD06506.1| putative [Helicobacter pylori J99] Length = 2231 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G + +L PA G G N+Q + W +E Q Sbjct: 1886 FIHDAKTEEQKQDLFKKLNRGGVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 1945 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 1946 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2001 >gi|19115578|ref|NP_594666.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe 972h-] gi|74698449|sp|Q9UTL9|YIV5_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C144.05 gi|6138896|emb|CAB59685.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe] Length = 1375 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 6/95 (6%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + E + +L H S GL L + + IE ++R + Sbjct: 1243 LKRFKEERSLQVLTLHARSQSSGLTLTN-ATHVFMCEPLLN-----SGIEMQAISRVHRI 1296 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 G R FVYY I ++T++ +L TK D L Sbjct: 1297 GQTRPTFVYYYIVEDTVEGHILNLSLTKHEQLDKL 1331 >gi|294656835|ref|XP_459156.2| DEHA2D15488p [Debaryomyces hansenii CBS767] gi|199431779|emb|CAG87327.2| DEHA2D15488p [Debaryomyces hansenii] Length = 1346 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 15/124 (12%), Positives = 42/124 (33%), Gaps = 9/124 (7%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + + + E++ + + F + Sbjct: 1088 EVLGIKYILYATFINPSQRTNNLAEFSNFPGGVTLIMDLRLASHGLTIISATRVYFINP- 1146 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q+ IE + R + G + V+V L+ + T++E + +R ++ + ++ Sbjct: 1147 ----VWQRSIEAQAIKRAHRIGQTKDVYVETLVLKGTLEEEIYRR----RSVDEESVDFG 1198 Query: 199 KKET 202 +++T Sbjct: 1199 REDT 1202 >gi|193210307|ref|NP_001024706.2| hypothetical protein F53H4.6 [Caenorhabditis elegans] gi|154147305|emb|CAD89731.2| C. elegans protein F53H4.6, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 933 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 22/197 (11%), Positives = 61/197 (30%), Gaps = 29/197 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-----DEK 55 +K Y + ++QG ++ + K + + + + K Sbjct: 485 LKIYKR-----SDEVQGILRQSSAACVGLKKLTDICDHPGIHKGVTPETKKFGSIEDSGK 539 Query: 56 IKALEVIIEK---ANAAPIIVAY----------HFNSDLARLQKAFPQGRTLDKDPCTIQ 102 ++ + +++ A +++ HF +F + + + Sbjct: 540 VRIVFQLLDMWLGTPGAKVVIFTQRRQVAVMLEHFMKQKRIAYCSFLKAKNAYDRENVVN 599 Query: 103 EW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + N + +L A G+ L N ++ F W+ + + Sbjct: 600 YFENTTDVQILLAPSIMFKLGMQL-KKANKVIIFDPEWNPDSDVKH----TREMSFLTKK 654 Query: 162 KRAVFVYYLIAQNTIDE 178 V V L+++ T+++ Sbjct: 655 VEDVTVVRLVSEGTVED 671 >gi|282601441|ref|ZP_05981716.2| superfamily II DNA and RNA helicase [Subdoligranulum variabile DSM 15176] gi|282569100|gb|EFB74635.1| superfamily II DNA and RNA helicase [Subdoligranulum variabile DSM 15176] Length = 2002 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 4/112 (3%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T + + G + +L A G G N+Q L + W + + Sbjct: 1628 QFIHDANTEARKADLFAKVRSGTVRVLMGSTAKMGAGTNVQRKLIALHHLDVPWRPSDIE 1687 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q R+ Q + V +Y + + T D Q + K ++ + Sbjct: 1688 QREGRMVR----QGNENKEVAIYRYVTEATFDAYSWQLIENKQRFIGQVMTS 1735 >gi|312877331|ref|ZP_07737297.1| helicase domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795894|gb|EFR12257.1| helicase domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 889 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 10/118 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + +GKI L+ + GLNLQ G ++ L W+ +Q RI Sbjct: 730 YSKVERDEIKELVLDGKIRLMIGT-DAAAEGLNLQTLGTLIN-VDLPWNPIRLEQRQGRI 787 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL----KKETIHV 205 Q V+VY L +++I++ + L + ++ +L K E + + Sbjct: 788 RRIGQ----QFDKVYVYNLRYKDSIEDKIHAVLSGRIKATYDMIGSLPEIIKDEWMEI 841 >gi|164660106|ref|XP_001731176.1| hypothetical protein MGL_1359 [Malassezia globosa CBS 7966] gi|159105076|gb|EDP43962.1| hypothetical protein MGL_1359 [Malassezia globosa CBS 7966] Length = 1126 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 51/160 (31%), Gaps = 21/160 (13%) Query: 39 AVYYDEEKHWKEVH---DEKIKALE-VIIEKANAAPIIVAYHFNSDLAR----------- 83 + + VH K+ + II+ ++V ++ L Sbjct: 891 PIVLPDGFDDVRVHTSTSTKLNMMLSEIIDAVQDEKVLVFSTLDNVLYELANALELLRIP 950 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ ++ I L + G GL+L + ++F W + Sbjct: 951 FLFYVSGMPQHLRNAYANMFMHKSNIRCLLMTTSVGGRGLDLH-CASRVIFAEPVWHWDL 1009 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 E V R + G R V V + ++T +E + +R Sbjct: 1010 -----ESQAVKRAWRMGQTRRVLVSTYVMRHTFEERITER 1044 >gi|134080265|emb|CAK97168.1| unnamed protein product [Aspergillus niger] Length = 2138 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 46/143 (32%), Gaps = 15/143 (10%) Query: 54 EKIKALEVIIEKAN-AAPIIVAYHFNS---------DLARLQKAFPQGRTLDKDPCTIQE 103 K+ L I+ ++ + DLA+++ Q Sbjct: 1959 SKLDKLIEILNGIPSNERALIFIQYPELIEVASKALDLAKIKHTAILTTDRKSMQKIEQF 2018 Query: 104 WNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI--ERIGVTRQRQA 159 G+ L + N ++F S + E + R R+ Sbjct: 2019 QQTSFGEDKALILNLGGEMAAGLNLQSANHVIFLS-PMNAETQYDYESAMIQAIGRSRRY 2077 Query: 160 GFKRAVFVYYLIAQNTIDELVLQ 182 G R V VY+L+A+++ID + Q Sbjct: 2078 GQTRRVHVYHLLAKHSIDVNIFQ 2100 >gi|261201348|ref|XP_002627074.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] gi|239592133|gb|EEQ74714.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis SLH14081] Length = 1503 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 21/161 (13%) Query: 57 KALEVIIEKANAAPIIVAYHFN---SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + L + + A IV + LAR F G + ++ + + I Sbjct: 1239 RHLIWLRQHDPGAKSIVFSQYKPFLGILARAFSHFKIGFSSIDSHDGVERFKSDPSIECF 1298 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G R V+ + Sbjct: 1299 LLHAKAHASGLNL-INATHVFLCEPLINTA-----IELQAIARVHRIGQHRETTVWMYLV 1352 Query: 173 QNTIDELVLQR--------LRTKSTIQDLLLNALKKETIHV 205 ++++E + + K + E + + Sbjct: 1353 SDSVEECIYDISVSRRLAHIAQKRKQDG---EKFRGEDLEM 1390 >gi|218297348|ref|ZP_03497964.1| DEAD-like helicase [Thermus aquaticus Y51MC23] gi|218242337|gb|EED08881.1| DEAD-like helicase [Thermus aquaticus Y51MC23] Length = 680 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 10/123 (8%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 ++ R ++ ++ E +L HP GL+L ++ + Sbjct: 474 AEDFRPIVLRADTVRPEEREAWLKAQVEKGGDVLLCHPRVVQTGLDLVEFSTLIFY---- 529 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL----VLQRLRTKSTIQDLL 194 E + R R + G K V V Y+ + T+ E + Q+ R+ ++ L Sbjct: 530 -QPEYSVYTL-RQAARRSWRIGQKEPVRVVYMAYRGTLQEAALVLIAQKARSSLALEGEL 587 Query: 195 LNA 197 + Sbjct: 588 VEG 590 >gi|239611704|gb|EEQ88691.1| SNF2 family helicase/ATPase [Ajellomyces dermatitidis ER-3] Length = 1503 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 21/161 (13%) Query: 57 KALEVIIEKANAAPIIVAYHFN---SDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + L + + A IV + LAR F G + ++ + + I Sbjct: 1239 RHLIWLRQHDPGAKSIVFSQYKPFLGILARAFSHFKIGFSSIDSHDGVERFKSDPSIECF 1298 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G R V+ + Sbjct: 1299 LLHAKAHASGLNL-IDATHVFLCEPLINTA-----IELQAIARVHRIGQHRETTVWMYLV 1352 Query: 173 QNTIDELVLQR--------LRTKSTIQDLLLNALKKETIHV 205 ++++E + + K + E + + Sbjct: 1353 SDSVEECIYDISVSRRLAHIAQKRKQDG---EKFRGEDLEM 1390 >gi|317013330|gb|ADU83938.1| adenine specific DNA methyltransferase [Helicobacter pylori Lithuania75] Length = 2866 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N GK+ +L PA G G N+Q + W +E Q Sbjct: 2360 FIHDAKTEEQKQDLFKKLNRGKVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 2419 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 2420 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2475 >gi|92116907|ref|YP_576636.1| helicase-like [Nitrobacter hamburgensis X14] gi|91799801|gb|ABE62176.1| helicase-like protein [Nitrobacter hamburgensis X14] Length = 928 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + E I L+ A + GLNLQ G ++ L W+ +Q I RI Sbjct: 749 EREQIKRAVKERTIRLIVAT-DAACEGLNLQTLGTLIN-VDLPWNPSRLEQRIGRIKRFG 806 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 QR+ +Y+ AQ T+DE V +L ++ Sbjct: 807 QRRDRVDMLNLLYHGSAQPTVDEKVYAKLSSRMK 840 >gi|145347265|ref|XP_001418094.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578322|gb|ABO96387.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1594 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 16/127 (12%) Query: 84 LQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + G++ ++ + N+ +L + + GL+L + + ++ Sbjct: 1022 HESITRIGQSRYDREQALKNFKNDPDCAVLLLN-RAAAEGLDL-SFVSYVFLMEPLSNMS 1079 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT------KSTIQDLLLN 196 QQ+I R + G K V V NT +E++L K ++ L+ Sbjct: 1080 LEQQVISR-----AHRMGQKDTVRVKVFAMANTAEEIMLDVQSELARNGTKMSLDS--LD 1132 Query: 197 ALKKETI 203 A + + Sbjct: 1133 ATTRHDV 1139 >gi|8778840|gb|AAF79839.1|AC026875_19 T6D22.14 [Arabidopsis thaliana] Length = 2254 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 30/194 (15%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYH------------- 76 QL + E + K+ L+ ++ N +V Y Sbjct: 769 LKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQQATQTPEGLLLGN 828 Query: 77 ----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 F + + K+ E + +L +C + L + Sbjct: 829 ILEDFVGQRFGPKSYEHGIYSSKKNSAINNFNKESQCCVLLLETRACSQTIKLLR-ADAF 887 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL--VLQRLRTKSTI 190 + F + + +E+I + + ++ L + T++E +L R + Sbjct: 888 ILFGSSLNPSHDVKHVEKIKIESCSER-----TKIFRLYSVCTVEEKALILARQNKR--- 939 Query: 191 QDLLLNALKKETIH 204 Q+ + L + H Sbjct: 940 QNKAVENLNRSLTH 953 >gi|114567522|ref|YP_754676.1| hypothetical protein Swol_2010 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338457|gb|ABI69305.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 1144 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 73/210 (34%), Gaps = 26/210 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q E+ L+ A + ++ +L N A+ ++ + ++ K ++ Sbjct: 432 EEEQAEIIAQLEDIVASVDPVALQEEIIQLGRLINQALDLEKREAESKLIKLKDTLIQHG 491 Query: 63 IEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPC------TIQEWNE 106 + +++ D G + +E+ E Sbjct: 492 LFDDPKMKLLIFTEHKDTLTYLVGKLQDWGLTVTQIHGGMKIGDRDAPGTRIYAEREFRE 551 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ A A+ G+NLQ+ ++ + + W+ +Q + RI + G + Sbjct: 552 D-CQVMVATEAAG-EGINLQF-CWFMINYDIPWNPVRLEQRMGRI-----HRYGQGKDCL 603 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++ NT + VL +L + + L+ Sbjct: 604 ILNFVSTNTREGRVLNKLFERIHKIEDDLD 633 >gi|320321569|gb|EFW77678.1| helicase domain-containing protein [Pseudomonas syringae pv. glycinea str. B076] Length = 1592 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 12/130 (9%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + T + E N G + +L G G N+Q L W + Sbjct: 1200 QVRFIHEANTDLQKSKLFDEMNRGDVRVLLGSTTKMGAGTNVQRRLVALHHVDAPWRPSD 1259 Query: 144 HQQM---IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD-------- 192 +Q IER G Q + + + T D + Q + K+ + Sbjct: 1260 LEQRDGRIERQGNMFYEQDPDGFEIEILRYATKQTYDSRMWQTIEYKAAGIEQFRKGDGL 1319 Query: 193 -LLLNALKKE 201 +++ + E Sbjct: 1320 QRVIDDVASE 1329 >gi|114320694|ref|YP_742377.1| helicase domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227088|gb|ABI56887.1| helicase domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 963 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + + ++ A + G+NLQ+ ++++ + L W+ + +Q I R Sbjct: 492 RLALVEHFRD-NAKIMIAT-EAAAEGVNLQF-CSLVINYDLPWNPQRIEQRIGRC----- 543 Query: 157 RQAGFKRAVFVYYLIAQ-NTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V + + N D+ V + L K ++ + L A Sbjct: 544 HRYGQQHDVIVVNFLNERNEADQRVHELLTEKFSLFNGLFGA 585 >gi|330933825|ref|XP_003304312.1| hypothetical protein PTT_16857 [Pyrenophora teres f. teres 0-1] gi|311319144|gb|EFQ87589.1| hypothetical protein PTT_16857 [Pyrenophora teres f. teres 0-1] Length = 605 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + +L S G GLNL ++++ + W+ Q R + G Sbjct: 431 FLSDSIVDILLMTIRSGGVGLNL-PVASVVIHLTPCWNPALTVQCNSR-----AIRPGQL 484 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + V V Y + ++++ ++ +K+ +++ Sbjct: 485 KFVQVVYFHSTDSLERVIRDIANSKAVKASEVID 518 >gi|302554851|ref|ZP_07307193.1| helicase domain-containing protein [Streptomyces viridochromogenes DSM 40736] gi|302472469|gb|EFL35562.1| helicase domain-containing protein [Streptomyces viridochromogenes DSM 40736] Length = 984 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 5/89 (5%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + + G+NLQ+ + +V + L W+ H Q R+ Q++ V Sbjct: 549 DPAVRRVLIATDCLSEGVNLQHHFDAVVHYDLAWNPTRHDQREGRVDRYGQKRDQ----V 604 Query: 166 FVYYLIAQN-TIDELVLQRLRTKSTIQDL 193 V + ++ ID VL+ L K Sbjct: 605 RVITMYGEDNGIDGKVLEVLFKKHRQIKK 633 >gi|92109603|ref|YP_571890.1| helicase-like [Nitrobacter hamburgensis X14] gi|91802685|gb|ABE65058.1| helicase-like [Nitrobacter hamburgensis X14] Length = 1703 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 13/191 (6%) Query: 16 QGENIEAFNSA-SKTVKCLQLANGA-VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIV 73 E N+ + + Q + + +++ ++ ++ A+ Sbjct: 1260 DNEEGNKLNALIANAFRVWQETGHHTFRLKDGQPFEKPGAGQLIFSDLGTISVEASRGFS 1319 Query: 74 AYHF-NSDLARLQK------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 AY + ++L RL + + ++N GK+ +L + G G+N+Q Sbjct: 1320 AYRWIRNELVRLGVPAPEIAYMQDHKKSEAKQRLFNDFNAGKVRILLGSSDTMGTGVNVQ 1379 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 L + W + +Q RI Q V V+ ++D + Q Sbjct: 1380 LRLKALHHLDVPWLPSQIEQREGRIVR----QGNQHDEVDVFAYATLGSLDATMWQNNER 1435 Query: 187 KSTIQDLLLNA 197 K+ L+ Sbjct: 1436 KARFIAAALSG 1446 >gi|146324153|ref|XP_753558.2| SNF2 family helicase [Aspergillus fumigatus Af293] gi|129558042|gb|EAL91520.2| SNF2 family helicase, putative [Aspergillus fumigatus Af293] gi|159126710|gb|EDP51826.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163] Length = 1167 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 19/154 (12%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQEWNEGKI 109 + + A ++V F + + +D + + ++ Sbjct: 975 NWVREDPDAKVVVFTQFLDFVRIFSSICAKEGWAHCRLTGKMSVGARDLSMNEFREKQEV 1034 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ A + G G+++ N + LWW+ Q R + G ++ V V Sbjct: 1035 KVMIASLMAGGTGIDM-SMANKCILVDLWWNEAVQQ-----QAFCRLYRIGQEKVVEVVK 1088 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLL--NALKKE 201 +I QNTID+ +LQ KS + + AL+K Sbjct: 1089 IIVQNTIDDYILQLQTKKSVNINKAIGEEALQKR 1122 >gi|86609185|ref|YP_477947.1| SNF2 family helicase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557727|gb|ABD02684.1| helicase, Snf2 family [Synechococcus sp. JA-2-3B'a(2-13)] Length = 903 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 10/113 (8%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + E I L + GLNLQ G ++ L W+ +Q I RI Sbjct: 740 EREDIKRAVRERTIR-LVVATDAACEGLNLQTLGTLINI-DLPWNPSRLEQRIGRIKRFG 797 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS----TIQDLLLNALKKETIH 204 Q + V + L+ T DE V + L + + L + ++ E I Sbjct: 798 QTRDR----VDMLNLVYHGTHDEKVYEVLSQRMKDRYDLFGSLPDTIEDEWIE 846 >gi|114567585|ref|YP_754739.1| hypothetical protein Swol_2075 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338520|gb|ABI69368.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 835 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 73/210 (34%), Gaps = 26/210 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSA--SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + Q E+ L+ A + ++ +L N A+ ++ + ++ K ++ Sbjct: 432 EEEQAEIIAQLEDIVASVDPVALQEEIIQLGRLINQALDLEKREAESKLIKLKDTLIQHG 491 Query: 63 IEKANAAPIIVAYHFN----------SDLARLQKAFPQGRTLDKDPC------TIQEWNE 106 + +++ D G + +E+ E Sbjct: 492 LFDDPKMKLLIFTEHKDTLTYLVGKLQDWGLTVTQIHGGMKIGDRDAPGTRIYAEREFRE 551 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ A A+ G+NLQ+ ++ + + W+ +Q + RI + G + Sbjct: 552 D-CQVMVATEAAG-EGINLQF-CWFMINYDIPWNPVRLEQRMGRI-----HRYGQGKDCL 603 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + ++ NT + VL +L + + L+ Sbjct: 604 ILNFVSTNTREGRVLNKLFERIHKIEDDLD 633 >gi|308185126|ref|YP_003929259.1| adenine specific DNA methyltransferase [Helicobacter pylori SJM180] gi|308061046|gb|ADO02942.1| adenine specific DNA methyltransferase [Helicobacter pylori SJM180] Length = 2834 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G++ +L PA G G N+Q + W +E Q Sbjct: 2328 FIHDAKTEEQKQDLFKKINRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 2387 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 2388 MEGRGVRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2443 >gi|289423818|ref|ZP_06425612.1| superfamily II DNA and RNA helicase [Peptostreptococcus anaerobius 653-L] gi|289155755|gb|EFD04426.1| superfamily II DNA and RNA helicase [Peptostreptococcus anaerobius 653-L] Length = 2917 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G++ +L G G N+Q L + W + +Q Sbjct: 2365 FIHEANSDKQKDELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2424 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y + +NT D + Q + K ++ + Sbjct: 2425 RAGRIVR----QGNENEKVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2471 >gi|217032758|ref|ZP_03438241.1| hypothetical protein HPB128_26g4 [Helicobacter pylori B128] gi|298736002|ref|YP_003728527.1| hypothetical protein HPB8_506 [Helicobacter pylori B8] gi|216945521|gb|EEC24178.1| hypothetical protein HPB128_26g4 [Helicobacter pylori B128] gi|298355191|emb|CBI66063.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 2518 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G++ +L PA G G N+Q + W +E Q Sbjct: 2046 FIHDAKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 2105 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 2106 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2161 >gi|259484742|tpe|CBF81224.1| TPA: ATP-dependent DNA helicase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1415 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 42/131 (32%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLAR----LQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 + + + E A IV + L ++ ++D+ + + I Sbjct: 1174 RHILWLREHDPGAQSIVFSQYKGFLDYLANAFRRFKIGYSSVDESDGIEKFKKDPGIECF 1233 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G R V+ + Sbjct: 1234 LLHAKAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRPTTVWMYLI 1287 Query: 173 QNTIDELVLQR 183 +T+++ + Sbjct: 1288 SDTVEKSIYDI 1298 >gi|118382598|ref|XP_001024455.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila] gi|89306222|gb|EAS04210.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 413 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 59/191 (30%), Gaps = 6/191 (3%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + +EL ++ + I+ + +K L++ + + KEV + +VII Sbjct: 156 KEESKELEAKIKQQVIQQVKDKKEKLKILKVLSPDNSSKLQIIVKEVKKVQQMKEKVIIY 215 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + + +D I+ ++E G Sbjct: 216 SQFLSFLTYLQKVLNDRDVRYTRLDGTMNKKDRATAIKTFSEQSEFTAILISLKAGAFGL 275 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 N + W++ + + V V I +++I+E +LQ Sbjct: 276 NLVAANHVFICDPWYNPAIEVFLSANNI------IRQTKRVQVINFIMESSIEERILQCQ 329 Query: 185 RTKSTIQDLLL 195 + K ++ L Sbjct: 330 KKKRSLIQNTL 340 >gi|304399085|ref|ZP_07380953.1| SNF2-related protein [Pantoea sp. aB] gi|304353325|gb|EFM17704.1| SNF2-related protein [Pantoea sp. aB] Length = 2289 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 19/208 (9%) Query: 4 YHKFQRELYCDL-QGENIEAFNSASKTVKCLQLANGAVYYDEE-------KHWKEVHDEK 55 Y L L G+ I + S+ K ++ A+ E+ + K Sbjct: 1362 YAALIENLKAGLPDGKQIIFMDEKSQHNKLRRIIASALGLAEQQIGIINATTVSKASGVK 1421 Query: 56 IKALEVIIEKANA----APIIVAYHFNSDLARLQKAF--PQGRTLDKDPCTIQEWNEGKI 109 +K ++ +E + DLAR + +L ++NEG+ Sbjct: 1422 LKPVKKPVEPVEKADGSFKDGAWDKYYQDLARYEDYQAAMSDASLAGMEGIAADYNEGRT 1481 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 P++ + G+NL G +L W Q R + V+Y Sbjct: 1482 PIIICN-KKAEVGINLHKGTADSHHLTLPWTPASIDQRNGRGARVGSERDTM----RVHY 1536 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + + DE L+ L+ K + ++ + Sbjct: 1537 YCGKGSFDEFRLETLQRKKNWINDVMKS 1564 >gi|238614560|ref|XP_002398709.1| hypothetical protein MPER_00645 [Moniliophthora perniciosa FA553] gi|215475799|gb|EEB99639.1| hypothetical protein MPER_00645 [Moniliophthora perniciosa FA553] Length = 75 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 25/54 (46%) Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + +E + R + G R V L+ +++I+ ++Q KS + D L+ Sbjct: 3 IYSPKVEFQAMDRIHRLGQHRPVKAIKLVVEDSIESRIVQLQEKKSAMIDATLS 56 >gi|210134644|ref|YP_002301083.1| DNA methylase [Helicobacter pylori P12] gi|210132612|gb|ACJ07603.1| DNA methylase [Helicobacter pylori P12] Length = 2808 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G++ +L PA G G N+Q + W +E Q Sbjct: 2336 FIHDAKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 2395 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 2396 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2451 >gi|149199530|ref|ZP_01876564.1| putative ATP-dependent helicase [Lentisphaera araneosa HTCC2155] gi|149137326|gb|EDM25745.1| putative ATP-dependent helicase [Lentisphaera araneosa HTCC2155] Length = 956 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 13/109 (11%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F G+T + I ++ + I +L + G+NL + N + + + W L + Sbjct: 489 FHGGQTDTEQQAIIDDFGKKDSDIRVLITS-DAGSQGVNLHFYCNRMFNYDIPWSLITLE 547 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE-----LVLQRLRTKST 189 Q RI + G + ++YY+IA++ +D +++ L K Sbjct: 548 QRNGRID-----RYGQSKTPYIYYMIAKSDLDGLKTDLHIIENLTKKEE 591 >gi|255941182|ref|XP_002561360.1| Pc16g10500 [Penicillium chrysogenum Wisconsin 54-1255] gi|211585983|emb|CAP93720.1| Pc16g10500 [Penicillium chrysogenum Wisconsin 54-1255] Length = 2162 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 56/177 (31%), Gaps = 26/177 (14%) Query: 36 ANGAVYYDEE-------KHWKEVHDEKIKALEVIIEK-ANAAPIIVAYHFNSDLARLQKA 87 +G + + + + K+ L II +I+ N L A Sbjct: 1954 CSGHIVQSKIVPGEILVSEDQAIQSTKLDKLVEIIRNVPEDELVIIFVQINHLLPVASNA 2013 Query: 88 FPQGRTLDKDP-----CTIQEWNEGK------------IPLLFAHPASCGHGLNLQYGGN 130 + I E+ + L + + N Sbjct: 2014 LKAANIDHRMVTQTNLKGIDEFKDSPKPKKGTIQPPSRPKALILNLGTSMAAGLNLQCAN 2073 Query: 131 ILVFFSLWWDLEEH-QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++F S ++ H + R R+ G +R V+VY+L+ +NT D + Q+ ++ Sbjct: 2074 HVIFLSPYFTTSHHDYDSGMTQAIGRARRFGQEREVYVYHLLVKNTYDVNIFQKAQS 2130 >gi|307694007|ref|ZP_07636244.1| SNF2-related protein [Ruminococcaceae bacterium D16] Length = 1314 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 937 FIHEANTEVRKKELFSKVRTGQVRVLMGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 996 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI V VY + + T D + Q + K ++ + Sbjct: 997 RKGRIERQGNSNPL----VHVYRYVTEGTFDAYLWQTVENKQKFISQIMTS 1043 >gi|211906285|gb|ACJ11660.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] gi|211906292|gb|ACJ11664.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 72 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%) Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 3 QFNARLHRQGQTRPVFIHHLVMNDSIDLTVLEALENKHITQKALLDALKKDI 54 >gi|211906290|gb|ACJ11663.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 72 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%) Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 3 QFNARLHRQGQTRPVFIHHLVMNDSIDITVLEALENKHITQKALLDALKKDI 54 >gi|266625261|ref|ZP_06118196.1| superfamily II DNA and RNA helicase [Clostridium hathewayi DSM 13479] gi|288862841|gb|EFC95139.1| superfamily II DNA and RNA helicase [Clostridium hathewayi DSM 13479] Length = 634 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 33/103 (32%), Gaps = 4/103 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 529 FIHEANTEVRKKELFSKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 588 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 RI Q V VY + + T D + Q + K Sbjct: 589 RKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQK 627 >gi|317011733|gb|ADU85480.1| hypothetical protein HPSA_07665 [Helicobacter pylori SouthAfrica7] Length = 2802 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G++ +L PA G G N+Q + W +E Q Sbjct: 2330 FIHDAKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQARLVAMHELDCPWRPDELLQ 2389 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 2390 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2445 >gi|121709908|ref|XP_001272570.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] gi|119400720|gb|EAW11144.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1] Length = 1473 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 23/165 (13%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK---AFPQGRTLDKDPCTIQEWN-EGKIPLL 112 + + + E A I+ + + L L F G + I+ + + I Sbjct: 1246 RHILWLREHDPGAKSIIFSQYKTFLEVLGTAFARFKIGYSSIDYADGIERFKSDPAIECF 1305 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 F H + GLNL + + IE + R + G R V+ + Sbjct: 1306 FLHAKAQSSGLNLVN-ATHVFLCEPLVNTA-----IELQAIARVHRIGQHRPTTVWMYLV 1359 Query: 173 QNTIDELVLQR----------LRTKSTIQDL---LLNALKKETIH 204 +T+++ + + K+ Q +++ L + I Sbjct: 1360 SDTVEQSIYDLSVSRRLSHIFQKEKTEAQGAARPVIDDLTETAID 1404 >gi|328887631|emb|CAJ68736.2| putative DNA/RNA helicase Tn1549-like,CTn5-Orf21 [Clostridium difficile] Length = 2993 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G++ +L G G N+Q L + W + +Q Sbjct: 2441 FIHEANSDKQKDELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2500 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y + +NT D + Q + K ++ + Sbjct: 2501 RAGRIVR----QGNENEKVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2547 >gi|300814911|ref|ZP_07095142.1| helicase C-terminal domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511001|gb|EFK38270.1| helicase C-terminal domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 2848 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G++ +L G G N+Q L + W + +Q Sbjct: 2296 FIHEANSDKQKDELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2355 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y + +NT D + Q + K ++ + Sbjct: 2356 RAGRIVR----QGNENEKVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2402 >gi|126699473|ref|YP_001088370.1| putative conjugative transposon DNA recombination protein [Clostridium difficile 630] Length = 3011 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G++ +L G G N+Q L + W + +Q Sbjct: 2459 FIHEANSDKQKDELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2518 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y + +NT D + Q + K ++ + Sbjct: 2519 RAGRIVR----QGNENEKVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2565 >gi|328854882|gb|EGG04012.1| hypothetical protein MELLADRAFT_89725 [Melampsora larici-populina 98AG31] Length = 145 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 34/107 (31%), Gaps = 6/107 (5%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 F + R + T ++ + + + G GLN+ + + Sbjct: 3 FEASGIRFCQLHGNMSTFERTCQLNPFTKDPVVEAFVVLIEAGGVGLNMT-CADEVYLMD 61 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 W+ + Q V G R V ++++ +I++ + Sbjct: 62 AHWNPQVVQ-----QAVDHLHHIGQTRPVRAFHVVTGQSIEQHLYNV 103 >gi|317011160|gb|ADU84907.1| hypothetical protein HPSA_04625 [Helicobacter pylori SouthAfrica7] Length = 2802 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G++ +L PA G G N+Q + W +E Q Sbjct: 2330 FIHDAKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQARLVAMHELDCPWRPDELLQ 2389 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 2390 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2445 >gi|254976974|ref|ZP_05273446.1| putative helicase [Clostridium difficile QCD-66c26] gi|255651892|ref|ZP_05398794.1| putative helicase [Clostridium difficile QCD-37x79] gi|260687151|ref|YP_003218285.1| putative helicase [Clostridium difficile R20291] gi|260213168|emb|CBE04620.1| putative helicase [Clostridium difficile R20291] Length = 2909 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G++ +L G G N+Q L + W + +Q Sbjct: 2357 FIHEANSDKQKDELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 2416 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y + +NT D + Q + K ++ + Sbjct: 2417 RAGRIVR----QGNENEKVNIYRYVTENTFDAYLWQTIENKQKFISQIMTS 2463 >gi|193297458|gb|ACF17793.1| putative helicase/DNA methylase [Helicobacter pylori] Length = 2609 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G + +L PA G G N+Q + W +E Q Sbjct: 2094 FIHDAKTEEQKQDLFKKINRGGVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 2153 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 2154 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2209 >gi|296391289|ref|ZP_06880764.1| putative DNA helicase [Pseudomonas aeruginosa PAb1] Length = 84 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 6/81 (7%) Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 A+ G G NL N + F L W + + R + G R V V + + T Sbjct: 1 TAAAGTGNNLTA-ANYVFFLGLPWTPGQQE-----QAEDRAYRNGQLRMVVVKIPLVEAT 54 Query: 176 IDELVLQRLRTKSTIQDLLLN 196 IDE + Q L K + L+ Sbjct: 55 IDEQLWQLLNAKRQVAQDLIE 75 >gi|25029457|ref|NP_739511.1| putative ATP-dependent helicase [Corynebacterium efficiens YS-314] gi|259508359|ref|ZP_05751259.1| ATP-dependent helicase [Corynebacterium efficiens YS-314] gi|23494746|dbj|BAC19711.1| putative ATP-dependent helicase [Corynebacterium efficiens YS-314] gi|259164029|gb|EEW48583.1| ATP-dependent helicase [Corynebacterium efficiens YS-314] Length = 941 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 1/111 (0%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G +K + ++ PL + G+NL + LV + + W L QQ Sbjct: 474 MHGGLPDEKQMQLVDDFKRTDSPLRILVTGDVASEGVNLHTLCHHLVHYDIPWSLIRIQQ 533 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI QR + + ++ + VL RL + + LL Sbjct: 534 RNGRIDRYGQRNNPQITTLLLEPSDSEGIGEIKVLTRLMEREYEANKLLGD 584 >gi|225155638|ref|ZP_03724127.1| DNA or RNA helicase of superfamily II-like protein [Opitutaceae bacterium TAV2] gi|224803611|gb|EEG21845.1| DNA or RNA helicase of superfamily II-like protein [Opitutaceae bacterium TAV2] Length = 541 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 62/180 (34%), Gaps = 20/180 (11%) Query: 27 SKTVKCLQLANGAVYYDEEKHWK--EVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA 82 ++ K Q+A G Y E K + K + ++ KA ++V F+ + Sbjct: 346 AQRGKLSQIAKGFRYEGGESSRKVTPIKSLKPTVVGALVRKAAAEGRQVLVWCVFDEEAK 405 Query: 83 RLQKAF---------PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 + + K ++++ GKI +L G+GLN + ++ Sbjct: 406 IVGRHLKGVKGVAQLHGDTPEGKRERILEDFRHGKIRVLVGKAGMLGYGLNFPFVETMV- 464 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 F E V R + G + + V+ +++ + + + K + + Sbjct: 465 FSGYDDSFERFY-----QAVRRAYRYGATKRLTVHLPYIPG-LEDHIWENILRKKSQWEE 518 >gi|237741482|ref|ZP_04571963.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|229429130|gb|EEO39342.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] Length = 2036 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + G I +L G G N+Q L + W + +Q Sbjct: 1677 FIHSANSEQQKDEMFAKVRSGDIRILLGSTQKMGAGTNVQTKLIALHDLDVPWRPSDLEQ 1736 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + ++T D + Q + K ++ + Sbjct: 1737 RAGRIVR----QGNENEKVEVYRYVTESTFDAYLWQTIENKQKFISQVMTS 1783 >gi|330948217|gb|EGH48477.1| SNF2-related:helicase [Pseudomonas syringae pv. pisi str. 1704B] Length = 98 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 7/86 (8%) Query: 91 GRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + K I + + ++ G G NL N + F L W Sbjct: 19 SDSPKKRQKAIDAFQQDPDCRVFIGTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD---- 73 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNT 175 R + G R V V +A++T Sbjct: 74 -QAEDRAYRNGQLRMVVVKIPLAEDT 98 >gi|303312199|ref|XP_003066111.1| DNA repair helicase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240105773|gb|EER23966.1| DNA repair helicase, putative [Coccidioides posadasii C735 delta SOWgp] Length = 2149 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 11/113 (9%) Query: 99 CTIQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ ++ G + + A GLNLQ +I+ F L + + + Sbjct: 2007 KSLADFQNGTEEVKSKALILALGDVTASGLNLQAANHIVFFHPLIARSQYDYESGMSQAM 2066 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT----KSTIQDLLLNALKKET 202 R R+ G ++ V +Y+ +A T++ + +R R K + ++ LK E Sbjct: 2067 GRSRRYGQQKHVHIYHFLALKTVEVNIFERRRRECLVKRD--KIFVSLLKNEI 2117 >gi|224139698|ref|XP_002323233.1| hypothetical protein POPTRDRAFT_576142 [Populus trichocarpa] gi|222867863|gb|EEF04994.1| hypothetical protein POPTRDRAFT_576142 [Populus trichocarpa] Length = 97 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 5/62 (8%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 WW+ + E + + G K V + LIAQN+I+E +L+ K Sbjct: 16 HSCLEPWWNSAD-----EEQAINCVHRYGQKENVRIVRLIAQNSIEERILEMQERKKLAS 70 Query: 192 DL 193 + Sbjct: 71 EA 72 >gi|242210723|ref|XP_002471203.1| predicted protein [Postia placenta Mad-698-R] gi|220729762|gb|EED83631.1| predicted protein [Postia placenta Mad-698-R] Length = 2759 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 43/136 (31%), Gaps = 11/136 (8%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR-----TLDKDPCTIQEWNEGKIP 110 ++ L + + IV + L L+ K+ + + I Sbjct: 1329 VRHLLYLELSDPGSKTIVFSAWADSLLMLKLWSGISCLRIDQHSGKENAAKRFRTDSSIS 1388 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L H GLN+ + + + Q I RI + G R VY Sbjct: 1389 VLLLHGERENAGLNVT-CASRVFLVESVVNHAFELQAIARID-----RMGQLRPTEVYCY 1442 Query: 171 IAQNTIDELVLQRLRT 186 ++T+++ +L Sbjct: 1443 YTEDTVEKSILDLAAK 1458 >gi|119479149|ref|XP_001259603.1| helicase, putative [Neosartorya fischeri NRRL 181] gi|119407757|gb|EAW17706.1| helicase, putative [Neosartorya fischeri NRRL 181] Length = 565 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 8/108 (7%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +D + + ++ ++ A + G GL++ N + LWW+ Q R Sbjct: 385 RDSSMNEFREKREVKVMIASLMAGGTGLDM-SMANKCILVDLWWNEAVQQ-----QAFCR 438 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL--NALKKE 201 + G ++ V V +I QNTID+ +LQ KS + + AL+K Sbjct: 439 LYRIGQEKVVEVVKIIVQNTIDDYILQLQTKKSANINSTIGEEALQKR 486 >gi|53718402|ref|YP_107388.1| putative helicase SNF2 family protein [Burkholderia pseudomallei K96243] gi|52208816|emb|CAH34755.1| putative helicase SNF2 family protein [Burkholderia pseudomallei K96243] Length = 1060 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 23/126 (18%) Query: 67 NAAPIIVAYHFNSDLAR--------------LQKAFPQGRTLDKDPCTIQEWN----EGK 108 N +I+ + + G D + + Sbjct: 518 NGERVIIFTEYRATQKWLQGLLAFNGFTGEDRVMTMYGGMHSDDRERVKAAFQTSPEKSP 577 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + +L A S G++LQ + LV + + W+ +Q RI QRQ V +Y Sbjct: 578 VRILLAT-DSASEGIDLQNYCSRLVHYEIPWNPNRMEQRNGRIDRHGQRQPQ----VMIY 632 Query: 169 YLIAQN 174 + + + Sbjct: 633 HFVGKG 638 >gi|323456007|gb|EGB11874.1| hypothetical protein AURANDRAFT_70672 [Aureococcus anophagefferens] Length = 3210 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 59/190 (31%), Gaps = 21/190 (11%) Query: 31 KCLQLA-NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA-PIIVAYHFNSDLARLQKAF 88 + + A D+ H K+ + +++ ++V F LA++ Sbjct: 2181 RLHSVVPCAAFAADDGATVAAPHGAKLAQIVDLVKSLPGDERVLVFVQFADLLAKVDGVL 2240 Query: 89 PQGRTL--------DKDPCTIQEWNE-----GKIPLLFAHPAS-CGHGLNLQYGGNILVF 134 + + + +L + G NL + + Sbjct: 2241 NDSGIKTLKIKGSAHQMMNAMTAFQAETLAKDDPRVLLLELHNESASGANLTTANHAIFV 2300 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ--- 191 L D + E + R R+ G KR V +Y +A +T+D + + + + Sbjct: 2301 HPLHVDKLQTYMACETQAIGRVRRYGQKRTVNLYRFLAADTVDSRLFE--SRRDELAPTP 2358 Query: 192 DLLLNALKKE 201 + + L E Sbjct: 2359 QAMADDLAAE 2368 >gi|188527680|ref|YP_001910367.1| hypothetical protein HPSH_04510 [Helicobacter pylori Shi470] gi|188143920|gb|ACD48337.1| hypothetical protein HPSH_04510 [Helicobacter pylori Shi470] Length = 2803 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G + +L PA G G N+Q + W +E Q Sbjct: 2331 FIHDAKTEEQKQDLFKKINRGGVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 2390 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 2391 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2446 >gi|257052779|ref|YP_003130612.1| helicase domain protein [Halorhabdus utahensis DSM 12940] gi|256691542|gb|ACV11879.1| helicase domain protein [Halorhabdus utahensis DSM 12940] Length = 952 Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + +++ + +L G+NLQY N ++ + L W+ +Q R+ Sbjct: 540 ERDERFEQFADADRGVLV-STDVISEGMNLQYAANQVIHYELPWNPNRLEQRNGRVDRYG 598 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q++ VF+ ++ + +D VL +L K+ Sbjct: 599 QKRDK----VFIRTMVVDDPMDRTVLTKLIKKAQ 628 >gi|317181593|dbj|BAJ59377.1| hypothetical protein HPF57_0303 [Helicobacter pylori F57] Length = 2818 Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G++ +L PA G G N+Q + W +E Q Sbjct: 2346 FIHDAKTEEQKQDLFKKINRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 2405 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 2406 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2461 >gi|253999373|ref|YP_003051436.1| DNA methylase N-4/N-6 domain-containing protein [Methylovorus sp. SIP3-4] gi|253986052|gb|ACT50909.1| DNA methylase N-4/N-6 domain protein [Methylovorus sp. SIP3-4] Length = 838 Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 54/148 (36%), Gaps = 13/148 (8%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD------KDPCTIQEWNE 106 +I I+ + IV + + +QKA P ++ + I E+++ Sbjct: 298 SARIAKAAEIVAQDPDDHFIVWHDLEDERHAIQKAIPNAVSVYGSQDLDEREKRIVEFSD 357 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK +L P G G N Q + +F + + + + R ++ V Sbjct: 358 GKFSVLSTKPIIAGSGCNFQRHCHREIFAGIGFKFNDFI-----QAIYRVQRFQQTHQVR 412 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + ++ + VL L+ K + + Sbjct: 413 IDIIYSE--AEREVLASLKQKWELDKQM 438 >gi|66822083|ref|XP_644396.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|66823325|ref|XP_645017.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60472519|gb|EAL70471.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] gi|60473216|gb|EAL71164.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4] Length = 1518 Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 59/153 (38%), Gaps = 24/153 (15%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 ++ ++ E V L+ I+ + P +L+R+ K Sbjct: 1254 LIMRLKEIV-------EIGEKCIVFSAFNDTLKDIVWTVSRIP---------ELSRVYKI 1297 Query: 88 FPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + TL + + ++ + + ++ + +GLN+ N ++F W + Q Sbjct: 1298 YMTELTLKQRANIVSDFQTKDSEFNIIIMNSDLAAYGLNITA-ANHIIFVDPIWFASKEQ 1356 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 Q I+R + G + VFV LI +N+ ++ Sbjct: 1357 QSIKR-----SHRIGQTKPVFVEKLIIENSCEQ 1384 >gi|211906288|gb|ACJ11662.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 72 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%) Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 3 QFNARLHRQGQTRPVFIHHLVMNDSIDITVLEALENKHINQKALLDALKKDI 54 >gi|320593748|gb|EFX06157.1| DNA repair protein rad5 [Grosmannia clavigera kw1407] Length = 457 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 37/152 (24%), Gaps = 23/152 (15%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDK 96 + + L + ++ + L F Sbjct: 283 DVVRLPSKVEALLLDLKSLPPNTKCLIFSAWRLTLDVIQKGLDQASIQSTRFDGEIPQKG 342 Query: 97 DPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER----- 150 + ++ N+ I ++ + G Q F S L Q R Sbjct: 343 RQAVVDKFRNDQNISVMLLTLSCGAVG---QVVFCSPTFCSRMLTLCTLQSESNRRDPNP 399 Query: 151 ----IGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 + R + G + V A+NT +E Sbjct: 400 TLEEQALARIHRLGQTKEVTTVRFFARNTFEE 431 >gi|297718581|gb|ADI50196.1| putative methylase/helicase [Rhodococcus equi] Length = 2934 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 4/110 (3%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 ++ +G+I +L G GLN+Q +V Sbjct: 2334 RGMKPEEIAFMHDYDNPKAKAKLVEACADGRIRVLITSTKKGGTGLNVQRALKQMVNLDP 2393 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 W + +Q I RI Q V V ++A+ + D ++ Q + K Sbjct: 2394 AWTAADMEQRIGRIIR----QGNVNETVSVVNMVARRSYDAMMYQYVARK 2439 >gi|197313568|ref|YP_002149612.1| putative methylase/helicase [Rhodococcus equi] gi|197092610|emb|CAQ30352.1| putative methylase/helicase [Rhodococcus equi] Length = 2949 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 4/110 (3%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 ++ +G+I +L G GLN+Q +V Sbjct: 2335 RGMKPEEIAFMHDYDNPKAKAKLVEACADGRIRVLITSTKKGGTGLNVQRALKQMVNLDP 2394 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 W + +Q I RI Q V V ++A+ + D ++ Q + K Sbjct: 2395 AWTAADMEQRIGRIIR----QGNVNETVSVVNMVARRSYDAMMYQYVARK 2440 >gi|197313499|ref|YP_002149544.1| putative methylase/helicase [Rhodococcus equi] gi|197092541|emb|CAQ30280.1| putative methylase/helicase [Rhodococcus equi] Length = 2949 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 4/110 (3%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 ++ +G+I +L G GLN+Q +V Sbjct: 2335 RGMKPEEIAFMHDYDNPKAKAKLVEACADGRIRVLITSTKKGGTGLNVQRALKQMVNLDP 2394 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 W + +Q I RI Q V V ++A+ + D ++ Q + K Sbjct: 2395 AWTAADMEQRIGRIIR----QGNVNETVSVVNMVARRSYDAMMYQYVARK 2440 >gi|10956643|ref|NP_066779.1| putative methylase [Rhodococcus equi] gi|31983873|ref|NP_858481.1| hypothetical protein pREAT701_27 [Rhodococcus equi] gi|10657890|gb|AAG21729.1| putative methylase [Rhodococcus equi] gi|10801081|dbj|BAB16635.1| Putative methylase (or helicase) [Rhodococcus equi] Length = 3229 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 4/110 (3%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 ++ +G+I +L G GLN+Q +V Sbjct: 2615 RGMKPEEIAFMHDYDNPKAKAKLVEACADGRIRVLITSTKKGGTGLNVQRALKQMVNLDP 2674 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 W + +Q I RI Q V V ++A+ + D ++ Q + K Sbjct: 2675 AWTAADMEQRIGRIIR----QGNVNETVSVVNMVARRSYDAMMYQYVARK 2720 >gi|331243368|ref|XP_003334327.1| hypothetical protein PGTG_16196 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309313317|gb|EFP89908.1| hypothetical protein PGTG_16196 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 55 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%) Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 +E R + G K+ V V++ I TI+E +L K + D Sbjct: 4 HWNPTVEAQAFDRLHRIGQKKTVQVFHFITPKTIEEKILIVQNRKKQLTD 53 >gi|225027237|ref|ZP_03716429.1| hypothetical protein EUBHAL_01493 [Eubacterium hallii DSM 3353] gi|224955437|gb|EEG36646.1| hypothetical protein EUBHAL_01493 [Eubacterium hallii DSM 3353] Length = 2685 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + G++ L + G G N+Q L + W + +Q Sbjct: 2325 FIHDANTDVQKARLFSKVRSGQVRFLLGSTSKMGAGTNVQDRLIALHHLDVPWRPADIEQ 2384 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V ++ I +NT D Q + K ++ + Sbjct: 2385 QEGRILR----QGNKNKKVKIFRYITENTFDAYSWQLIENKQKFIGQIMTS 2431 >gi|258514692|ref|YP_003190914.1| helicase domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778397|gb|ACV62291.1| helicase domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 945 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 11/98 (11%) Query: 96 KDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + ++ + + P+ L G+NL + + L+ F + W L QQ RI Sbjct: 486 EQQAVVESFGQENSPVRLLIASDVASEGINLHFLSHRLIHFDIPWSLMTFQQRNGRID-- 543 Query: 155 RQRQAGFKRAVFVYYLIAQNT-----IDELVLQRLRTK 187 + G + +YYL+ + + D +L+ L K Sbjct: 544 ---RYGQECTPEIYYLVTETSNPKIRGDVRILEVLIQK 578 >gi|255089038|ref|XP_002506441.1| SNF2 super family [Micromonas sp. RCC299] gi|226521713|gb|ACO67699.1| SNF2 super family [Micromonas sp. RCC299] Length = 2616 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 15/148 (10%) Query: 50 EVHDEKIKA-LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL--------DKDPCT 100 VH K+ ++ I + I+V F + ++ + + Sbjct: 2460 GVHGTKMAHLVQRIKDTPADERILVFVQFPDLMKQIADVLQEANIKTLKLKGSVHQQTGA 2519 Query: 101 IQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + E+ + + LL G NL + + L + + E + Sbjct: 2520 LDEFQKEDLRKGDARVLLLLSRDESASGANLTTANHAIFVHPLLTTTQYEYEASETQAIG 2579 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 R R+ G + V ++ +I +++ID +++ Sbjct: 2580 RIRRYGQTKMVKIWRMIVRDSIDAEIIE 2607 >gi|320531413|ref|ZP_08032379.1| protein, SNF2 family [Actinomyces sp. oral taxon 171 str. F0337] gi|320136366|gb|EFW28348.1| protein, SNF2 family [Actinomyces sp. oral taxon 171 str. F0337] Length = 996 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 1/111 (0%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + ++++ + P+ + G+NL + L+ + + W L +Q Sbjct: 478 MHGSLSDVEQQEIVEQFRQAHTPVRVLVTGDVASEGVNLHAQCHELIHYDIPWSLIRIEQ 537 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + + + + + D VL RL K L Sbjct: 538 RNGRIDRYGQSVSPQITTLLLSPSDPRFSGDVRVLTRLMEKEDQAHRALGD 588 >gi|320040099|gb|EFW22033.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 2095 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 99 CTIQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ ++ G + + A GLNLQ +I+ F L + + + Sbjct: 1953 KSLADFQNGTEEVKSKALILALGDVTASGLNLQAANHIVFFHPLIARSQYDYESGMSQAM 2012 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 R R+ G ++ V +Y+ +A T++ + +R R Sbjct: 2013 GRSRRYGQQKHVHIYHFLALKTVEVNIFERRRR 2045 >gi|167832513|gb|ACA01823.1| hypothetical protein VPI2_0006c [Vibrio cholerae] Length = 1041 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 24/217 (11%), Positives = 65/217 (29%), Gaps = 43/217 (19%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----------HDEKIKALEVII 63 L+ E ++ + ++ + D + K+ +L + Sbjct: 771 QLENEE---SHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYGKSGKLVSLLETL 827 Query: 64 E--KANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPCTIQ 102 + ++ I+ S + KA + +++ I Sbjct: 828 DRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKSVPTRKSMIS 887 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + L G N +V +W+ + E R + G + Sbjct: 888 DFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAK-----EAQATDRVYRIGQE 942 Query: 163 RAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 + V +Y + + + D + + L K+ ++D ++ Sbjct: 943 KEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 979 >gi|320176448|gb|EFW51499.1| N-6 DNA methylase [Shigella dysenteriae CDC 74-1112] Length = 2280 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 5/105 (4%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 ++NEG+ ++ + G+NL G + +L W Q R Sbjct: 1464 EGIAADYNEGRTQIIICN-KKAEVGINLHIGTTDIHHLTLPWTPASIDQRNGRGARVGSP 1522 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 Q V V+Y + T D+ L L+ K +++ + E Sbjct: 1523 Q----EKVNVHYYCGKGTFDDFRLDTLKRKKDWIKMVMTSDMSEI 1563 >gi|119193294|ref|XP_001247253.1| hypothetical protein CIMG_01024 [Coccidioides immitis RS] Length = 2097 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 99 CTIQEWNEGKIPL-----LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ ++ G + + A GLNLQ +I+ F L + + + Sbjct: 1955 KSLADFQNGTEEVKSKALILALGDVTASGLNLQAANHIVFFHPLIARSQYDYESGMSQAM 2014 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 R R+ G ++ V +Y+ +A T++ + +R R Sbjct: 2015 GRSRRYGQQKHVHIYHFLALKTVEVNIFERRRR 2047 >gi|218132347|ref|ZP_03461151.1| hypothetical protein BACPEC_00206 [Bacteroides pectinophilus ATCC 43243] gi|217992685|gb|EEC58687.1| hypothetical protein BACPEC_00206 [Bacteroides pectinophilus ATCC 43243] Length = 376 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 4/96 (4%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 +E GK +L CG G+N+Q + W +Q R Q Sbjct: 9 KEMRTGKKKVLIGSTDKCGTGVNVQTHLVAMHHVDCPWKPSSIEQREGRGIR----QGNE 64 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 V +Y + + T D + K ++ + Sbjct: 65 NEEVAIYRYVTKGTFDAYNWSLVENKQRFISQVMTS 100 >gi|211997722|gb|ACJ14807.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 69 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 29/48 (60%) Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 4 RLHRQGQTRPVFIHHLVMNDSIDITVLEALENKHITQKALLDALKKDI 51 >gi|207108246|ref|ZP_03242408.1| hypothetical protein HpylH_00918 [Helicobacter pylori HPKX_438_CA4C1] Length = 504 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G++ +L PA G G N+Q + W +E Q Sbjct: 159 FIHDAKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 218 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 219 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 274 >gi|110669157|ref|YP_658968.1| ATP-dependent helicase HepA [Haloquadratum walsbyi DSM 16790] gi|109626904|emb|CAJ53373.1| ATP-dependent helicase HepA [Haloquadratum walsbyi DSM 16790] Length = 959 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 58/155 (37%), Gaps = 18/155 (11%) Query: 53 DEKIKALEV--IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD----------PCT 100 D K++ L + ++ + +I+ + L L+ + + D Sbjct: 486 DAKLQRLLDETLPQRFQYSRVIIFTKYVDTLEYLKDQIEESQGERTDVFTLHGSLNEAQR 545 Query: 101 IQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +NE G + G+NLQ+ N ++ + L W+ +Q RI Q Sbjct: 546 KERFNEFEGSDRAVLIATDVISEGMNLQHAANQIIHYELPWNPNRLEQRNGRIDRYGQ-- 603 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + V + ++ ++ +D +L+ L K+ Sbjct: 604 --EEDEVVIRTMVVEDQMDVAILKTLVKKADQIRR 636 >gi|211997714|gb|ACJ14802.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] gi|211997717|gb|ACJ14804.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 69 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 29/48 (60%) Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 4 RLHRQGQTRPVFIHHLVMNDSIDLTVLEALENKHITQKALLDALKKDI 51 >gi|296805275|ref|XP_002843462.1| ATP-dependent DNA helicase [Arthroderma otae CBS 113480] gi|238844764|gb|EEQ34426.1| ATP-dependent DNA helicase [Arthroderma otae CBS 113480] Length = 1469 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 10/131 (7%) Query: 57 KALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP-LL 112 + L + + A IV F L++ F G + P I+ + E Sbjct: 1208 RHLLWLRQHDPGAKSIVFSQDKEFLGILSQAFYRFKIGYSSIDTPFGIERFKEDHTKECF 1267 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G + V+ + Sbjct: 1268 LLHAKAHASGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHQDTTVWMYLV 1321 Query: 173 QNTIDELVLQR 183 NT++E + Q Sbjct: 1322 ANTVEESIYQI 1332 >gi|312622196|ref|YP_004023809.1| helicase domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202663|gb|ADQ45990.1| helicase domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 888 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 10/118 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + +GKI L+ + GLNLQ G L+ L W+ +Q RI Sbjct: 730 YSKVERDEIKELVLDGKIKLMIGT-DAAAEGLNLQTLG-ALINVDLPWNPIRLEQRQGRI 787 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL----KKETIHV 205 Q V+VY L +++I++ + L + ++ +L K E + + Sbjct: 788 KRIGQ----QFDKVYVYNLRYKDSIEDKIHAVLSGRIKATYDMIGSLPEIIKDEWMEI 841 >gi|331226118|ref|XP_003325729.1| helicase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309304719|gb|EFP81310.1| helicase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 76 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 5/57 (8%) Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 W+ +E + + G + V VY T++ + Q R K + Sbjct: 1 MEPSWNPA-----MEAQAIDCLYRLGQVKPVNVYRYYVHGTLETNIYQIQRRKGELA 52 >gi|327303100|ref|XP_003236242.1| hypothetical protein TERG_03291 [Trichophyton rubrum CBS 118892] gi|326461584|gb|EGD87037.1| hypothetical protein TERG_03291 [Trichophyton rubrum CBS 118892] Length = 2122 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 101 IQEWNEGK----IPLLFAHP-ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+ GK +L + GLNLQ +I+ F L + + R Sbjct: 1986 ISEFQNGKESVKSKVLILNLGDVTASGLNLQNANHIIFFGPLVARSQYDYDSGMAQAIGR 2045 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ G + V +Y+++A T++ + + R K + Sbjct: 2046 SRRYGQLKHVHIYHVLALKTVEVNIFE-QRKKQYLAKR 2082 >gi|18254358|gb|AAL66728.1|AF459401_1 putative helicase [Vibrio cholerae] Length = 507 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 24/217 (11%), Positives = 66/217 (30%), Gaps = 43/217 (19%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVII 63 L+ E ++ + ++ + D + + K+ +L + Sbjct: 134 QLENEE---SHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYGESGKLVSLLETL 190 Query: 64 E--KANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPCTIQ 102 + ++ I+ S + KA + +++ I Sbjct: 191 DRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKSVPTRKSMIS 250 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + L G N +V +W+ + E R + G + Sbjct: 251 DFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAK-----EAQATDRVYRIGQE 305 Query: 163 RAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 + V +Y + + + D + + L K+ ++D ++ Sbjct: 306 KEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 342 >gi|225457289|ref|XP_002281382.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1252 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 8/135 (5%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC--TIQEWNEGKIPL 111 + +I A+ ++ + G TL +D + + ++ + Sbjct: 530 DMKPRCLKMIIFAHHLKVLDGIQEFICKKGIGFVRIDGNTLARDRQSAVLSFRSSTEVKI 589 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GL+ +VF L I R + G AV +Y Sbjct: 590 AIIGITAGGFGLDF-SSAQNVVFLELPQSPS-----IMLQAEDRAHRRGQTNAVNIYIFC 643 Query: 172 AQNTIDELVLQRLRT 186 A++T+DE Q L Sbjct: 644 AKDTMDESHWQNLNK 658 >gi|260497888|ref|ZP_05816007.1| II DNA and RNA helicase [Fusobacterium sp. 3_1_33] gi|260196554|gb|EEW94082.1| II DNA and RNA helicase [Fusobacterium sp. 3_1_33] Length = 2036 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + G I +L G G N+Q L + W + +Q Sbjct: 1677 FIHSAGNEQQKDEMFAKVRSGDIRILLGSTQKMGAGTNVQTKLIALHDLDVPWRPSDLEQ 1736 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + ++T D + Q + K ++ + Sbjct: 1737 RAGRIVR----QGNENEKVEVYRYVTESTFDAYLWQTIENKQKFISQVMTS 1783 >gi|26348885|dbj|BAC38082.1| unnamed protein product [Mus musculus] Length = 891 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 20/181 (11%), Positives = 47/181 (25%), Gaps = 37/181 (20%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + + L N + ++ + N + + Sbjct: 708 KYYRAILEKNFSFLTKGANQHNVPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSS 767 Query: 53 -------------DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK- 96 K+ ++ ++ K A +++ L L+ Q R + Sbjct: 768 EASDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYER 827 Query: 97 ---------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 I + + + + G G+NL + + F W+ + Sbjct: 828 IDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTA-ADTCIIFDSDWNPQNDL 886 Query: 146 Q 146 Q Sbjct: 887 Q 887 >gi|229508136|ref|ZP_04397641.1| hypothetical protein VCF_003370 [Vibrio cholerae BX 330286] gi|229511625|ref|ZP_04401104.1| hypothetical protein VCE_003034 [Vibrio cholerae B33] gi|229518764|ref|ZP_04408207.1| hypothetical protein VCC_002789 [Vibrio cholerae RC9] gi|229343453|gb|EEO08428.1| hypothetical protein VCC_002789 [Vibrio cholerae RC9] gi|229351590|gb|EEO16531.1| hypothetical protein VCE_003034 [Vibrio cholerae B33] gi|229355641|gb|EEO20562.1| hypothetical protein VCF_003370 [Vibrio cholerae BX 330286] Length = 932 Score = 49.0 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/217 (11%), Positives = 66/217 (30%), Gaps = 43/217 (19%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVII 63 L+ E ++ + ++ + D + + K+ +L + Sbjct: 554 QLENEE---SHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYGESGKLVSLLETL 610 Query: 64 E--KANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPCTIQ 102 + ++ I+ S + KA + +++ I Sbjct: 611 DRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKSVPTRKSMIS 670 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + L G N +V +W+ + E R + G + Sbjct: 671 DFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAK-----EAQATDRVYRIGQE 725 Query: 163 RAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 + V +Y + + + D + + L K+ ++D ++ Sbjct: 726 KEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 762 >gi|15641763|ref|NP_231395.1| helicase, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|9656282|gb|AAF94909.1| helicase, putative [Vibrio cholerae O1 biovar El Tor str. N16961] Length = 940 Score = 49.0 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/217 (11%), Positives = 66/217 (30%), Gaps = 43/217 (19%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVII 63 L+ E ++ + ++ + D + + K+ +L + Sbjct: 562 QLENEE---SHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYGESGKLVSLLETL 618 Query: 64 E--KANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPCTIQ 102 + ++ I+ S + KA + +++ I Sbjct: 619 DRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKSVPTRKSMIS 678 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + L G N +V +W+ + E R + G + Sbjct: 679 DFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAK-----EAQATDRVYRIGQE 733 Query: 163 RAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 + V +Y + + + D + + L K+ ++D ++ Sbjct: 734 KEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 770 >gi|313890685|ref|ZP_07824311.1| helicase C-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313120933|gb|EFR44046.1| helicase C-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 1628 Score = 49.0 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G++ +L G G N+Q L + W + +Q Sbjct: 1076 FIHEANSDKQKDELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 1135 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V +Y + +NT D + Q + K ++ + Sbjct: 1136 RAGRIVR----QGNENEKVNIYRYVTENTFDSYLWQTIENKQKFISQIMTS 1182 >gi|242762226|ref|XP_002340333.1| chromodomain-helicase-DNA-binding protein, putative [Talaromyces stipitatus ATCC 10500] gi|218723529|gb|EED22946.1| chromodomain-helicase-DNA-binding protein, putative [Talaromyces stipitatus ATCC 10500] Length = 203 Score = 49.0 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 6/91 (6%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 ++ A + G GL++ N + WW+ Q + + G RAV Sbjct: 88 PISKIMIAALKAGGTGLDITA-ANKCILVEPWWNYAVQQ-----LAFCLLFRIGQTRAVE 141 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + L+A N +D+ +++ + K + + Sbjct: 142 IVKLVASNAVDDHMMELQKLKLRNFEGAIGD 172 >gi|145608510|ref|XP_370061.2| hypothetical protein MGG_12793 [Magnaporthe oryzae 70-15] gi|145015982|gb|EDK00472.1| hypothetical protein MGG_12793 [Magnaporthe oryzae 70-15] Length = 550 Score = 49.0 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 62/208 (29%), Gaps = 27/208 (12%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS------ASKTVKCLQLANGAVYYDEEK-HWKEVHDE 54 +QY + +E ++ + E ++ + N Y K ++ E Sbjct: 339 EQYDRTVQETAEIIRQKTWERTGKGNHFGLFQAQLQLRLICNHGTYQVPLKLSRRDRRTE 398 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL-- 112 + L+ I A+ F++ A +++ N Sbjct: 399 REAMLQAIGLGADTICSGCGAPFSAFEALSSTLCKHKFC----AECMEDNNAPCPLCHAR 454 Query: 113 --------FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + LNL + + F W+ +E + R ++ G + Sbjct: 455 TRVDELDEVPNAGMGLPLLNLT-VASHIFIFEPQWNPS-----VESQAIGRAQRLGQDQQ 508 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQD 192 VFV + T++ + + + K + Sbjct: 509 VFVTRYLVAGTVENRMHSQQKRKVELAK 536 >gi|145609289|ref|XP_367576.2| hypothetical protein MGG_07487 [Magnaporthe oryzae 70-15] gi|145016677|gb|EDK01107.1| hypothetical protein MGG_07487 [Magnaporthe oryzae 70-15] Length = 1514 Score = 49.0 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 54/170 (31%), Gaps = 14/170 (8%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDL----ARLQK 86 K Q+ + D ++ + + A I+ + A K Sbjct: 1259 KLAQI---QSVELVHPSFTTKVDAIVRHILWLRLSEPGAKSIIFSQYTGFFGVLSAAFTK 1315 Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ + + E I F H + GLNL N ++ + Q Sbjct: 1316 YQIGFSSIGEHNGIERFKQEAGIECFFLHARAQSSGLNLVN-ANHVILCEPLLNTALELQ 1374 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR-LRTKSTIQDLLL 195 I R+ + G K+ V+ + + T++ + ++ + D ++ Sbjct: 1375 AIARVD-----RIGQKQDTTVWLYMVEGTVEPTIYNLSVQRRLEHMDRVM 1419 >gi|261195100|ref|XP_002623954.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] gi|239587826|gb|EEQ70469.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081] Length = 1894 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 9/98 (9%) Query: 101 IQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTR 155 I ++ G K +L H N ++FF + ++ + R Sbjct: 1764 IAQFQTGTEKVKSKVLILHLGDVSASGLNLQNANHVIFFHPLFAKSQYDYNSGMAQAIGR 1823 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQ--RLRT--KST 189 R+ G ++ V +Y+ +A TI+ + + R K Sbjct: 1824 SRRYGQQKHVHIYHFLALKTIEVNIFEQRRQERLVKRD 1861 >gi|134288138|ref|YP_001110302.1| SNF2-related protein [Burkholderia vietnamiensis G4] gi|134132788|gb|ABO60414.1| SNF2-related protein [Burkholderia vietnamiensis G4] Length = 599 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 6/121 (4%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQE-WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 ++LA + GR + +E + +G+ L + LQ + VF Sbjct: 439 QAELADFRPVLITGRQTEDQKWIAKESFIKGESLLCIVALRAATGIDGLQSRARVAVFAE 498 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 L W I + R + G + V YYL++ +D +L+ L K+ L+ Sbjct: 499 LDWSPA-----IHKQAEDRLHRDGQQNPVLCYYLVSDAGVDPDMLENLGAKAQQFIGLMG 553 Query: 197 A 197 Sbjct: 554 D 554 >gi|210612840|ref|ZP_03289493.1| hypothetical protein CLONEX_01695 [Clostridium nexile DSM 1787] gi|210151393|gb|EEA82401.1| hypothetical protein CLONEX_01695 [Clostridium nexile DSM 1787] Length = 997 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 24/202 (11%), Positives = 66/202 (32%), Gaps = 18/202 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAF-NSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 +K++ K +R+ + + +A + + L++ E + K Sbjct: 753 IKEFDKIRRKYFVACKNARKDAMFRILQQLMLLLKICADPSLAYEYNSNEPPTKVKKAIH 812 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNEGK 108 + + + I V ++ + + ++E + + Sbjct: 813 LLQMWEKERVAIGVRKIEVAESYYHYLKQAFPKRPIFMITGKKNPCKQRQRIVEELRKTE 872 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L + S +N+ + ++ L ++ +Q R + V Sbjct: 873 NGILLSTQQSLSESMNI-DDVDKIILPELHYNHAAMEQYYFRFIRYTSQNFKQ-----VV 926 Query: 169 YLIAQNTIDELVLQRLRTKSTI 190 +LI +N+I+ +L+ + K I Sbjct: 927 FLIYENSIEVNLLKMILAKEKI 948 >gi|195146790|ref|XP_002014367.1| GL18989 [Drosophila persimilis] gi|194106320|gb|EDW28363.1| GL18989 [Drosophila persimilis] Length = 168 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 27/101 (26%) Query: 100 TIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + + + G G+NL G N ++ W+ QQ I R Sbjct: 1 MIKRFNSEVNKRARVFLISARAGGQGINL-IGANRVIILDTSWNPSNDQQNIFR------ 53 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 T++E V R TK + +++ Sbjct: 54 -----------------GTMEEKVYSRSVTKQAMSFRVVDE 77 >gi|298528754|ref|ZP_07016158.1| helicase domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512406|gb|EFI36308.1| helicase domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 955 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 15/116 (12%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 R + G + + ++++ + PL L G+NL Y + L+ F + W Sbjct: 479 DRHVERLHGGLSDIEQQRVVEDFGRDESPLRLLIASDVASEGINLHYLCHRLIHFDIPWS 538 Query: 141 LEEHQQMIERIGVTRQRQAG-------FKRAVFVYYLIAQNTIDELVLQRLRTKST 189 L QQ RI Q + R ++ D +L+ L +K Sbjct: 539 LMVFQQRNGRIDRYGQERTPLISYLAIQSREPKIH-------GDMRILELLISKDE 587 >gi|294785906|ref|ZP_06751194.1| helicase [Fusobacterium sp. 3_1_27] gi|294487620|gb|EFG34982.1| helicase [Fusobacterium sp. 3_1_27] Length = 2042 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + G I +L G G N+Q L + W + +Q Sbjct: 1683 FIHSAGNEQQKDEMFAKVRSGDIRILLGSTQKMGAGTNVQTKLIALHDLDVPWRPSDLEQ 1742 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + ++T D + Q + K ++ + Sbjct: 1743 RAGRIVR----QGNENEKVEVYRYVTESTFDAYLWQTIENKQKFISQVMTS 1789 >gi|297733908|emb|CBI15155.3| unnamed protein product [Vitis vinifera] Length = 1201 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 8/135 (5%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC--TIQEWNEGKIPL 111 + +I A+ ++ + G TL +D + + ++ + Sbjct: 532 DMKPRCLKMIIFAHHLKVLDGIQEFICKKGIGFVRIDGNTLARDRQSAVLSFRSSTEVKI 591 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + G GL+ +VF L I R + G AV +Y Sbjct: 592 AIIGITAGGFGLDF-SSAQNVVFLELPQSPS-----IMLQAEDRAHRRGQTNAVNIYIFC 645 Query: 172 AQNTIDELVLQRLRT 186 A++T+DE Q L Sbjct: 646 AKDTMDESHWQNLNK 660 >gi|237745126|ref|ZP_04575607.1| conserved hypothetical protein [Fusobacterium sp. 7_1] gi|229432355|gb|EEO42567.1| conserved hypothetical protein [Fusobacterium sp. 7_1] Length = 2042 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + G I +L G G N+Q L + W + +Q Sbjct: 1683 FIHSAGNEQQKDEMFAKVRSGDIRILLGSTQKMGAGTNVQTKLIALHDLDVPWRPSDLEQ 1742 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + ++T D + Q + K ++ + Sbjct: 1743 RAGRIVR----QGNENEKVEVYRYVTESTFDAYLWQTIENKQKFISQVMTS 1789 >gi|323454234|gb|EGB10104.1| hypothetical protein AURANDRAFT_15050 [Aureococcus anophagefferens] Length = 80 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 6/85 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L S G GLN+ N +VF W++ + H R + G + V V + Sbjct: 1 VLLMTVHSGGTGLNITR-ANHVVFLDRWFNPQVHF-----QAQARCHRIGQDKEVDVSFF 54 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL 195 A T+DE++ + + K D++L Sbjct: 55 DATCTLDEVMAEINKLKEGNADVVL 79 >gi|317037762|ref|XP_001399104.2| SNF2 family helicase/ATPase [Aspergillus niger CBS 513.88] Length = 1156 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 49/149 (32%), Gaps = 11/149 (7%) Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQK----AFPQGRTLDKDPCTIQEWNEGKIPLL 112 + + + E A +V + + L L ++D ++ + Sbjct: 918 RHILWLREHDPGAKSVVFSQYKNFLEILANALSRFKIGFSSVDAKDGIQNFKSDPAVECF 977 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 H + GLNL + + IE + R + G R V+ + Sbjct: 978 LLHAKAHSSGLNLVN-ATHVFLCEPLINTA-----IELQAIARVHRIGQHRPTTVWMYLV 1031 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +T+++ + ++ + ++ K+E Sbjct: 1032 SDTVEQSIYDLSVSRR-LAHIVQKEKKQE 1059 >gi|242051685|ref|XP_002454988.1| hypothetical protein SORBIDRAFT_03g002565 [Sorghum bicolor] gi|241926963|gb|EES00108.1| hypothetical protein SORBIDRAFT_03g002565 [Sorghum bicolor] Length = 104 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 36/92 (39%), Gaps = 7/92 (7%) Query: 97 DPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++++N ++ ++ + LN+ ++L+ + W E + R Sbjct: 11 RHKAVKDFNMVPEVTIIIMSLKAASLSLNMVAACHVLMLYLWWNS------TTEDQAMDR 64 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G V V L ++T+++ +L K Sbjct: 65 AHRIGQTWVVMVSQLTIKDTLEDCILGLQEKK 96 >gi|211997720|gb|ACJ14806.1| putative phage-associated helicase [Candidatus Hamiltonella defensa] Length = 69 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 29/48 (60%) Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R + G R VF+++L+ ++ID VL+ L K Q LL+ALKK+ Sbjct: 4 RLHRQGQTRPVFIHHLVMNDSIDITVLEALENKHINQKALLDALKKDI 51 >gi|78190661|gb|ABB29652.1| SNF2 family DNA-dependent ATPase domain-containing protein [Suberites fuscus] Length = 439 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 50/177 (28%), Gaps = 51/177 (28%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKE-----------------VHDEKIKA 58 Q +N + ++ N H H K++A Sbjct: 263 QKKNKPVTHVFQALQYLRKVCNHPSLVVSPDHPMYSKVQDYLHQTSSTIRDIKHASKLQA 322 Query: 59 LEVIIEKA-------------------NAAPIIVAYHFNSDLARLQKAFPQGRTLD---- 95 L+ ++ + ++ + S L +++ +G Sbjct: 323 LKQLLHDCGIGVSGDGGVSSEGVGSAVSQHRALLFCQYKSMLDIIERDLFKGHMPSVTYL 382 Query: 96 ---------KDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 +Q++N+ I +L G GLNL G + ++FF W+ Sbjct: 383 RLDGSVAAGNRHSVVQKFNDDPSIDVLLLTTHVGGLGLNLT-GADTVIFFEHDWNPM 438 >gi|307109751|gb|EFN57988.1| hypothetical protein CHLNCDRAFT_142147 [Chlorella variabilis] Length = 944 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 6/76 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + G G+ L G + ++ + E+ + R + G + + V + Sbjct: 826 VFLLTYRAGGAGITLTAGTH-IILCEPTLNPS-----FEKQAIGRSHRMGQTKPLTVTRM 879 Query: 171 IAQNTIDELVLQRLRT 186 + TI+E V + + Sbjct: 880 LMLGTIEEKVAEFVER 895 >gi|302838767|ref|XP_002950941.1| hypothetical protein VOLCADRAFT_104918 [Volvox carteri f. nagariensis] gi|300263636|gb|EFJ47835.1| hypothetical protein VOLCADRAFT_104918 [Volvox carteri f. nagariensis] Length = 1284 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 19/119 (15%) Query: 88 FPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ- 145 P T K I + K + S G+NL N + + + Sbjct: 1087 HPCDMTQKKRTEAIDSFQRNPKTCVFLLSMRSGAVGINLTA-ANYVFLLEPCMNPAMEEH 1145 Query: 146 -------------QMIERIGVTRQRQAGFKRA---VFVYYLIAQNTIDELVLQRLRTKS 188 + I + R + G +R + ++ +++E V++ ++T+ Sbjct: 1146 GSHTATLKSARLPRHIVFRAIGRAWRMGQQRPVVVKRFFVKVSPGSVEERVMEVVKTRR 1204 >gi|239610686|gb|EEQ87673.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3] Length = 1945 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 9/98 (9%) Query: 101 IQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTR 155 I ++ G K +L H N ++FF + ++ + R Sbjct: 1815 IAQFQTGTEKVKSKVLILHLGDVSASGLNLQNANHVIFFHPLFAKSQYDYNSGMAQAIGR 1874 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQ--RLRT--KST 189 R+ G ++ V +Y+ +A TI+ + + R K Sbjct: 1875 SRRYGQQKHVHIYHFLALKTIEVNIFEQRRQERLVKRD 1912 >gi|194337018|ref|YP_002018812.1| SNF2-related protein [Pelodictyon phaeoclathratiforme BU-1] gi|194309495|gb|ACF44195.1| SNF2-related protein [Pelodictyon phaeoclathratiforme BU-1] Length = 966 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 9/108 (8%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T D + + + + G+NLQ+ +++V + + W+ + +Q I R Sbjct: 486 SPTADMRQALVDYFRHEAT--IMIATEAAAEGINLQF-CSLVVNYDMPWNPQRIEQRIGR 542 Query: 151 IGVTRQRQAGFKRAVFVYYLI-AQNTIDELVLQRLRTKSTIQDLLLNA 197 + G + V V + N D V Q L K + + A Sbjct: 543 C-----HRYGQRFDVVVVNFLNMANEADNRVFQLLDQKFRLFSGVFGA 585 >gi|327348877|gb|EGE77734.1| SNF2 family helicase [Ajellomyces dermatitidis ATCC 18188] Length = 2158 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 9/98 (9%) Query: 101 IQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTR 155 I ++ G K +L H N ++FF + ++ + R Sbjct: 2028 IAQFQTGTEKVKSKVLILHLGDVSASGLNLQNANHVIFFHPLFAKSQYDYNSGMAQAIGR 2087 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQ--RLRT--KST 189 R+ G ++ V +Y+ +A TI+ + + R K Sbjct: 2088 SRRYGQQKHVHIYHFLALKTIEVNIFEQRRQERLVKRD 2125 >gi|311741611|ref|ZP_07715434.1| helicase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303275|gb|EFQ79355.1| helicase [Corynebacterium pseudogenitalium ATCC 33035] Length = 1702 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 7/121 (5%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 D R++ +K + N GK+ +L A+ G G N+Q G + + Sbjct: 1212 MDKDRIRFIHDW---DNKRTQLFDDCNNGKVDVLIANTTKLGTGANIQSRGVAIHHVDVP 1268 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 W + +Q R Q V Y + + T D + K + NA Sbjct: 1269 WRPADLEQQDGRFFR----QGNQNDEVARYTYVGRGTYDGHSWATIERKGRFTNQFWNAD 1324 Query: 199 K 199 + Sbjct: 1325 R 1325 >gi|302797112|ref|XP_002980317.1| hypothetical protein SELMODRAFT_6818 [Selaginella moellendorffii] gi|300151933|gb|EFJ18577.1| hypothetical protein SELMODRAFT_6818 [Selaginella moellendorffii] Length = 89 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ +GLNL ++ + +E + R + G + V+ Sbjct: 1 VMLLPTQHGANGLNL-IEAQHVILVEPLLNPA-----VEAQAINRVHRIGQRLKTLVHRF 54 Query: 171 IAQNTIDELVLQRLRTKSTI 190 I +NT++E + + + K+ + Sbjct: 55 IIRNTVEENIYKMSQQKTNL 74 >gi|225375025|ref|ZP_03752246.1| hypothetical protein ROSEINA2194_00648 [Roseburia inulinivorans DSM 16841] gi|225213097|gb|EEG95451.1| hypothetical protein ROSEINA2194_00648 [Roseburia inulinivorans DSM 16841] Length = 1472 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 35/118 (29%), Gaps = 4/118 (3%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 T K + G++ +L A G G N+Q L W Sbjct: 1082 MPPEQIAFIHDANTEVKKRELFAKVRSGQVRVLMGSTAKMGAGTNVQDRLVALHDLDCPW 1141 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + Q RI Q + V V + + T D + Q + K ++ + Sbjct: 1142 RPRDLTQRKGRIER----QGNQNKLVHVCRYVTEGTFDAYLWQTVENKQKFISQIMTS 1195 >gi|154795688|gb|ABS86814.1| putative helicase/DNA methyltransferase [Helicobacter cetorum] Length = 4043 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++ + N G++ +L PA G G N+Q + W +E Q Sbjct: 3520 FIHDAKSEEQKQDLFKRVNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 3579 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + ++ +Y + T D + Q + TKS + NA K Sbjct: 3580 MEGRGIRQGNLLHQADPENFSMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 3635 >gi|326522272|dbj|BAK07598.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 178 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 30/76 (39%), Gaps = 6/76 (7%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +L +GLNL ++ + E ++R + G ++ F+ Sbjct: 35 PVQVLLMLIQHGANGLNLLE-AQHVILLEPLLNPSA-----EAQAISRIHRVGQDKSTFI 88 Query: 168 YYLIAQNTIDELVLQR 183 + I + TI++ + + Sbjct: 89 HRFIVKKTIEDSIYKM 104 >gi|318043006|ref|ZP_07974962.1| DEAD/DEAH box helicase-like protein [Synechococcus sp. CB0101] Length = 515 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 7/105 (6%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + + + + G+ LL A G G L +V W + + Sbjct: 403 QPPHERQAIVDRFQAGEASLLIASFGVGGLGFTLHR-ARHVVLLERPWTPGDAE-----Q 456 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R + G + + ++L D++V + +K+ + LL+ Sbjct: 457 AEDRCHRIGMQGTLHCHWLQL-GVADQMVDDLIASKAARIEQLLS 500 >gi|121585835|ref|ZP_01675629.1| hypothetical protein VC274080_1814 [Vibrio cholerae 2740-80] gi|121727705|ref|ZP_01680800.1| hypothetical protein VCV52_1735 [Vibrio cholerae V52] gi|153819628|ref|ZP_01972295.1| hypothetical protein A5C_1794 [Vibrio cholerae NCTC 8457] gi|153821151|ref|ZP_01973818.1| hypothetical protein A5E_2062 [Vibrio cholerae B33] gi|227081906|ref|YP_002810457.1| putative helicase [Vibrio cholerae M66-2] gi|255744824|ref|ZP_05418774.1| helicase putative [Vibrio cholera CIRS 101] gi|262161893|ref|ZP_06030911.1| helicase putative [Vibrio cholerae INDRE 91/1] gi|262169761|ref|ZP_06037452.1| helicase putative [Vibrio cholerae RC27] gi|298498169|ref|ZP_07007976.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|121549973|gb|EAX59991.1| hypothetical protein VC274080_1814 [Vibrio cholerae 2740-80] gi|121630002|gb|EAX62410.1| hypothetical protein VCV52_1735 [Vibrio cholerae V52] gi|126509832|gb|EAZ72426.1| hypothetical protein A5C_1794 [Vibrio cholerae NCTC 8457] gi|126521347|gb|EAZ78570.1| hypothetical protein A5E_2062 [Vibrio cholerae B33] gi|227009794|gb|ACP06006.1| putative helicase [Vibrio cholerae M66-2] gi|255737295|gb|EET92690.1| helicase putative [Vibrio cholera CIRS 101] gi|262021995|gb|EEY40705.1| helicase putative [Vibrio cholerae RC27] gi|262028625|gb|EEY47280.1| helicase putative [Vibrio cholerae INDRE 91/1] gi|297542502|gb|EFH78552.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 1149 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 24/217 (11%), Positives = 66/217 (30%), Gaps = 43/217 (19%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVII 63 L+ E ++ + ++ + D + + K+ +L + Sbjct: 771 QLENEE---SHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYGESGKLVSLLETL 827 Query: 64 E--KANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPCTIQ 102 + ++ I+ S + KA + +++ I Sbjct: 828 DRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKSVPTRKSMIS 887 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + L G N +V +W+ + E R + G + Sbjct: 888 DFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAK-----EAQATDRVYRIGQE 942 Query: 163 RAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 + V +Y + + + D + + L K+ ++D ++ Sbjct: 943 KEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 979 >gi|240145260|ref|ZP_04743861.1| putative Helicase [Roseburia intestinalis L1-82] gi|257202614|gb|EEV00899.1| putative Helicase [Roseburia intestinalis L1-82] Length = 702 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +LF G G N+Q + W + +Q Sbjct: 334 FIHEATTDAQKKELFGKVRSGEVRVLFGSTPKMGAGTNVQDRLIAIHNLDCPWRPSDLEQ 393 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + +K ++ + Sbjct: 394 RQGRIER----QGNMFPEVEVYRYVTEQTFDAYLYQLVESKQKFISQIMTS 440 >gi|71007686|ref|XP_758137.1| hypothetical protein UM01990.1 [Ustilago maydis 521] gi|46097419|gb|EAK82652.1| hypothetical protein UM01990.1 [Ustilago maydis 521] Length = 1751 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 11/85 (12%), Positives = 31/85 (36%), Gaps = 6/85 (7%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + ++ H + GLNL + + + + + R + G Sbjct: 1524 FRSDPNVHVMLLHSEAQSSGLNLLA-ASHIHILEPLLNTSQEL-----QAIGRVHRIGQT 1577 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTK 187 + ++ ++T++E +L K Sbjct: 1578 KETRIWCYYVKDTVEERILALSAYK 1602 >gi|302793320|ref|XP_002978425.1| hypothetical protein SELMODRAFT_109142 [Selaginella moellendorffii] gi|300153774|gb|EFJ20411.1| hypothetical protein SELMODRAFT_109142 [Selaginella moellendorffii] Length = 508 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 10/110 (9%) Query: 89 PQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ + +N + + A +C G+ L G + +V W+ + Sbjct: 350 HGALVTEERHELMDRFNAEGSEARVCLASIRACAEGITL-VGASRVVLLHPVWNPAQT-- 406 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 ++R + G KR VFVY L+ + ++ + R + K + + Sbjct: 407 ---NQAISRAFRLGQKRKVFVYRLVTE--VERVKNSRTKWKDFCSEAIFE 451 >gi|254430801|ref|ZP_05044504.1| SWI/SNF family helicase_2 [Cyanobium sp. PCC 7001] gi|197625254|gb|EDY37813.1| SWI/SNF family helicase_2 [Cyanobium sp. PCC 7001] Length = 528 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 29/208 (13%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + K + +GE + Q+A+ D K+ A Sbjct: 327 RLQRKVEDYRRRAARGEVRRDAEVLAVLTALRQIAS---------------DYKLPAART 371 Query: 62 IIEK--ANAAPIIVAYHFNSDLARLQKAF-----PQGRTLDKDPCTIQEWNEGKIPLLFA 114 +I A P++V F S + L + + + G+ PLL A Sbjct: 372 LISTLLARGEPVVVFTAFRSTASLLHAQLGGVLLTGALPPAQRQGLVDGFQAGRQPLLVA 431 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 + G G L +V W + + R + G + ++L Sbjct: 432 TFGTGGLGFTLHR-ARHVVLIERPWTPGDAE-----QAEDRCHRIGMGAPLCCHWLQL-G 484 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKET 202 D+LV + +K+ LLL +++ Sbjct: 485 VADQLVDGLIASKAERIALLLQRGEQQL 512 >gi|195867544|ref|ZP_03079547.1| superfamily II DNA and RNA helicase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195867982|ref|ZP_03079979.1| superfamily II DNA and RNA helicase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660378|gb|EDX53638.1| superfamily II DNA and RNA helicase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660788|gb|EDX54042.1| superfamily II DNA and RNA helicase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 2547 Score = 49.0 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + +G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRKGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDSYLWQTIENKQKFISQIMTS 2108 >gi|227484741|ref|ZP_03915057.1| superfamily II DNA and RNA helicase [Anaerococcus lactolyticus ATCC 51172] gi|227237263|gb|EEI87278.1| superfamily II DNA and RNA helicase [Anaerococcus lactolyticus ATCC 51172] Length = 2547 Score = 48.6 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDAYLWQTIENKQKFISQIMTS 2108 >gi|147675032|ref|YP_001217302.1| hypothetical protein VC0395_A1359 [Vibrio cholerae O395] gi|146316915|gb|ABQ21454.1| hypothetical protein VC0395_A1359 [Vibrio cholerae O395] gi|227013661|gb|ACP09871.1| putative helicase [Vibrio cholerae O395] Length = 1146 Score = 48.6 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 24/217 (11%), Positives = 66/217 (30%), Gaps = 43/217 (19%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVII 63 L+ E ++ + ++ + D + + K+ +L + Sbjct: 768 QLENEE---SHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYGESGKLVSLLETL 824 Query: 64 E--KANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPCTIQ 102 + ++ I+ S + KA + +++ I Sbjct: 825 DRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKSVPTRKSMIS 884 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + L G N +V +W+ + E R + G + Sbjct: 885 DFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAK-----EAQATDRVYRIGQE 939 Query: 163 RAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 + V +Y + + + D + + L K+ ++D ++ Sbjct: 940 KEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 976 >gi|302773700|ref|XP_002970267.1| hypothetical protein SELMODRAFT_441121 [Selaginella moellendorffii] gi|300161783|gb|EFJ28397.1| hypothetical protein SELMODRAFT_441121 [Selaginella moellendorffii] Length = 1029 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 8/87 (9%) Query: 89 PQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ + +N + + A +C G+ L G + +V W+ + Sbjct: 871 HGALVTEERHELMDRFNAEGSEARVCLASIRACAEGITL-VGASRVVLLHPVWNPAQT-- 927 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQ 173 ++R + G KR VFVY L+ + Sbjct: 928 ---NQAISRAFRLGQKRKVFVYRLVTE 951 >gi|291541420|emb|CBL14530.1| Helicase conserved C-terminal domain [Ruminococcus bromii L2-63] Length = 515 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +LF G G N+Q + W + +Q Sbjct: 147 FIHEATTDAQKKELFGKVRSGEVRVLFGSTPKMGAGTNVQDRLIAIHNLDCPWRPSDLEQ 206 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V VY + + T D + Q + +K ++ + Sbjct: 207 RQGRIER----QGNMFPEVEVYRYVTEQTFDAYLYQLVESKQKFISQIMTS 253 >gi|254524909|ref|ZP_05136964.1| Helicase conserved C-terminal domain protein [Stenotrophomonas sp. SKA14] gi|219722500|gb|EED41025.1| Helicase conserved C-terminal domain protein [Stenotrophomonas sp. SKA14] Length = 759 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLVTNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKQPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|254521296|ref|ZP_05133351.1| Helicase conserved C-terminal domain protein [Stenotrophomonas sp. SKA14] gi|219718887|gb|EED37412.1| Helicase conserved C-terminal domain protein [Stenotrophomonas sp. SKA14] Length = 771 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 649 RREDWIAEQLDRGIDVLVTNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 702 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL + L+ + K + + + + V Sbjct: 703 SWRIGQKQPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 752 >gi|163858602|ref|YP_001632900.1| hypothetical protein Bpet4284 [Bordetella petrii DSM 12804] gi|163262330|emb|CAP44633.1| conserved plasmid related protein [Bordetella petrii] Length = 644 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 522 RREDWIAEQLDRGIDVLVTNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 575 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL + L+ + K + + + + V Sbjct: 576 SWRIGQKQPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 625 >gi|160899595|ref|YP_001565177.1| helicase domain-containing protein [Delftia acidovorans SPH-1] gi|160365179|gb|ABX36792.1| helicase domain protein [Delftia acidovorans SPH-1] Length = 600 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 478 RREDWIAEQLDRGIDVLVTNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 531 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL + L+ + K + + + + V Sbjct: 532 SWRIGQKQPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 581 >gi|8132768|gb|AAF73380.1| MOM [Arabidopsis thaliana] Length = 2001 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 57/193 (29%), Gaps = 29/193 (15%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYH------------- 76 QL + E + K+ L+ ++ N +V Y Sbjct: 537 LKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQATQTPEGLLLGNI 596 Query: 77 ---FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 F + + K+ E + +L +C + L + + Sbjct: 597 LEDFVGQRFGPKSYEHGIYSSKKNSAINNFNKESQCCVLLLETRACSQTIKLLR-ADAFI 655 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL--VLQRLRTKSTIQ 191 F + + +E+I + + ++ L + T++E +L R + Q Sbjct: 656 LFGSSLNPSHDVKHVEKIKIESCSER-----TKIFRLYSVCTVEEKALILARQNMR---Q 707 Query: 192 DLLLNALKKETIH 204 + + L + H Sbjct: 708 NKAVENLNRSLTH 720 >gi|299471730|emb|CBN76951.1| conserved unknown protein [Ectocarpus siliculosus] Length = 708 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%) Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + R + G K V V+ L+ + ++E ++ R K + L++ A K Sbjct: 196 MTRDRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGK 244 Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 31/97 (31%), Gaps = 10/97 (10%) Query: 3 QYHKFQREL---YCDLQGENIEAFNSASKT-VKCLQLANGAVYYDEEKHWKEVH----DE 54 Y + Q QG + + + ++ ++ N + +++ ++ Sbjct: 112 LYKQIQESGAFGIAQEQGIGMASGKGLNNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSG 171 Query: 55 KIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFP 89 K + L+ ++ K I++ D A Sbjct: 172 KFELLDRMLPKLKAGGHRILMFTQMTRDRAHRIGQKH 208 >gi|297567701|ref|YP_003686672.1| hypothetical protein Mesil_3352 [Meiothermus silvanus DSM 9946] gi|296852150|gb|ADH65164.1| hypothetical protein Mesil_3352 [Meiothermus silvanus DSM 9946] Length = 919 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 19/155 (12%) Query: 53 DEKIKALEVIIEKA---NAAPIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDP 98 D K++AL +++ ++V + L + + + Sbjct: 462 DSKLEALIELLKDPLRLGQGRVLVFTRYKDTLEHLLQSLPLALSQPVFGVHGEMSERERE 521 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + +++ K +L A GLNLQ+ LV + L W+ +Q RI Q + Sbjct: 522 EVLLAFSQQKQAVLVATDVF-SEGLNLQHYAARLVHYDLPWNPNRLEQRNGRIDRFGQPE 580 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 V + L Q + D V + L K+ Sbjct: 581 P----TVRLRTLYYQRSFDVAVFKLLLEKAERIRQ 611 >gi|254848876|ref|ZP_05238226.1| helicase [Vibrio cholerae MO10] gi|254844581|gb|EET22995.1| helicase [Vibrio cholerae MO10] Length = 718 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 24/217 (11%), Positives = 66/217 (30%), Gaps = 43/217 (19%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVII 63 L+ E ++ + ++ + D + + K+ +L + Sbjct: 340 QLENEE---SHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYGESGKLVSLLETL 396 Query: 64 E--KANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPCTIQ 102 + ++ I+ S + KA + +++ I Sbjct: 397 DRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKSVPTRKSMIS 456 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + L G N +V +W+ + E R + G + Sbjct: 457 DFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAK-----EAQATDRVYRIGQE 511 Query: 163 RAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 + V +Y + + + D + + L K+ ++D ++ Sbjct: 512 KEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 548 >gi|241589875|ref|YP_002979900.1| helicase domain protein [Ralstonia pickettii 12D] gi|240868587|gb|ACS66246.1| helicase domain protein [Ralstonia pickettii 12D] Length = 1055 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 68/208 (32%), Gaps = 24/208 (11%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA--APIIV 73 +G+ ++ K +++AN + + K + +E+ I+ Sbjct: 815 EGKRNNLVTILARI-KAVEIANNFPQHPKATKGYAPLTSKQRFCIDKLEELVDLRRRPIM 873 Query: 74 AYHF--------NSDLARLQK--AFPQGRTLDKD-PCTIQEWNEGKIPLLFAHPASCGHG 122 + R G+T+ + + +G +P+ S G G Sbjct: 874 FTGYPGNAELVARHLAKRHIDSVVIHGGKTIKRRNAEFEARFRKGTVPVALVTYGSIGEG 933 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 N+ + ++ W + Q I R V V++ + +++ID + Q Sbjct: 934 TNIPQ-CSDVLLADKSWSARKESQAIARALRDE----NEWDEVKVHHALTEHSIDSYMQQ 988 Query: 183 RLRTKSTIQDLLLN-----ALKKETIHV 205 + K+ + + +E +H+ Sbjct: 989 VVSYKADSFNAGFDWGTPTTFNQEFLHM 1016 >gi|300813792|ref|ZP_07094099.1| helicase C-terminal domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512082|gb|EFK39275.1| helicase C-terminal domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 2547 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDAYLWQTIENKQKFISQIMTS 2108 >gi|94995094|ref|YP_603192.1| Superfamily II DNA and RNA helicase [Streptococcus pyogenes MGAS10750] gi|94548602|gb|ABF38648.1| Superfamily II DNA and RNA helicase [Streptococcus pyogenes MGAS10750] Length = 2547 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDSYLWQTIENKQKFISQIMTS 2108 >gi|313107526|ref|ZP_07793713.1| hypothetical protein PA39016_001010066 [Pseudomonas aeruginosa 39016] gi|310880215|gb|EFQ38809.1| hypothetical protein PA39016_001010066 [Pseudomonas aeruginosa 39016] Length = 759 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKQPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|163855369|ref|YP_001629667.1| hypothetical protein Bpet1064 [Bordetella petrii DSM 12804] gi|163259097|emb|CAP41396.1| conserved plasmid related protein [Bordetella petrii] Length = 770 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 648 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 701 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL + L+ + K + + + + V Sbjct: 702 SWRIGQKQPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 751 >gi|154253841|ref|YP_001414665.1| helicase domain-containing protein [Parvibaculum lavamentivorans DS-1] gi|154157791|gb|ABS65008.1| helicase domain protein [Parvibaculum lavamentivorans DS-1] Length = 759 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKQPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|94311266|ref|YP_584476.1| helicase-like protein [Cupriavidus metallidurans CH34] gi|218891399|ref|YP_002440266.1| hypothetical protein PLES_26731 [Pseudomonas aeruginosa LESB58] gi|254241417|ref|ZP_04934739.1| conserved hypothetical plasmid protein [Pseudomonas aeruginosa 2192] gi|24461594|gb|AAN62165.1|AF440523_72 conserved hypothetical plasmid protein [Pseudomonas aeruginosa] gi|93355118|gb|ABF09207.1| Putative plasmid-related DNA/RNA helicase [Cupriavidus metallidurans CH34] gi|126194795|gb|EAZ58858.1| conserved hypothetical plasmid protein [Pseudomonas aeruginosa 2192] gi|218771625|emb|CAW27398.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58] Length = 759 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKQPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|242222623|ref|XP_002477023.1| predicted protein [Postia placenta Mad-698-R] gi|220723649|gb|EED77778.1| predicted protein [Postia placenta Mad-698-R] Length = 353 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 42/125 (33%), Gaps = 10/125 (8%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + + + ++ + + +L NIL+ Sbjct: 143 QMYGIEYETLTGTMSGRRRAEALHKFMQSDAKGVRVLILSNVGAVGFNI--ACANILIII 200 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W ++ Q+I R+ R + V VY LIA+NT D + KS + + + Sbjct: 201 DTLWSAQDDSQLIGRLWRQR-----QLKLVHVYRLIARNTSDVFLNNISFDKSIMHNAFM 255 Query: 196 NALKK 200 + + Sbjct: 256 GSSRA 260 >gi|313667221|ref|YP_004049622.1| helicase domain protein [Oceanithermus profundus DSM 14977] gi|313153852|gb|ADR37702.1| helicase domain protein [Oceanithermus profundus DSM 14977] Length = 695 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 6/113 (5%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + + + K IQ+ + +L HP GL+L ++ + + Sbjct: 479 FRARALYSSTASARKREAWIQKAVREGLDVLILHPRLVQTGLDLIDFPTLVYY---QVEP 535 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + R R + G K V V Y + + T+ L L K+ + Sbjct: 536 SVYVL---RQAARRSWRIGQKHPVRVVYFVYRATLQTKALGLLAAKAQASHAI 585 >gi|87123312|ref|ZP_01079163.1| possible helicase [Synechococcus sp. RS9917] gi|86169032|gb|EAQ70288.1| possible helicase [Synechococcus sp. RS9917] Length = 522 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 63/199 (31%), Gaps = 32/199 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII- 63 ++R + L + EA + Q+A K+ A E +I Sbjct: 327 DDYRRRVRAGLVRSDAEA---FALLTALRQIAAEF---------------KLPAAEQLIR 368 Query: 64 -EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----DPCTIQEWNEGKIPLLFAHPA 117 A + +++ F L LQ+ + + + G I LL + Sbjct: 369 DCCAESGTVVLFSTFVEPLHLLQQRLGGAVLSGRLRPSERQAVVDRFQAGGIDLLLSTYG 428 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G L ++ W R + G + + ++L D Sbjct: 429 TGGLGFTLHR-ARHIILLERPWTPGAVD-----QAEDRCHRIGMEGELISHWLQL-GVAD 481 Query: 178 ELVLQRLRTKSTIQDLLLN 196 +LV + +K+ ++LL Sbjct: 482 QLVDGLVASKAKQIEVLLG 500 >gi|297588629|ref|ZP_06947272.1| superfamily II DNA and RNA helicase [Finegoldia magna ATCC 53516] gi|297574002|gb|EFH92723.1| superfamily II DNA and RNA helicase [Finegoldia magna ATCC 53516] Length = 2556 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDSYLWQTIENKQKFISQIMTS 2108 >gi|325849331|ref|ZP_08170748.1| helicase C-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480193|gb|EGC83262.1| helicase C-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 2547 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDSYLWQTIENKQKFISQIMTS 2108 >gi|18381045|gb|AAH22153.1| Ep400 protein [Mus musculus] Length = 1185 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +I S G+NL + +VF+ + +++ + G + + + Sbjct: 1 RIFCALLSTHSRATGINL-VEADTVVFYDNDLNP-----VMDAKAQEWCDRIGRCKDIHI 54 Query: 168 YYLIAQNTIDELVLQ 182 Y L++ N+I+E +L+ Sbjct: 55 YRLVSGNSIEEKLLK 69 >gi|302380800|ref|ZP_07269264.1| helicase C-terminal domain protein [Finegoldia magna ACS-171-V-Col3] gi|302311400|gb|EFK93417.1| helicase C-terminal domain protein [Finegoldia magna ACS-171-V-Col3] Length = 2547 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDSYLWQTIENKQKFISQIMTS 2108 >gi|327479865|gb|AEA83175.1| Helicase conserved C-terminal domain protein [Pseudomonas stutzeri DSM 4166] Length = 759 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLVTNPELVKTGLDLLDFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKQPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|313888230|ref|ZP_07821902.1| helicase C-terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845761|gb|EFR33150.1| helicase C-terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 2547 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDSYLWQTIENKQKFISQIMTS 2108 >gi|328871058|gb|EGG19429.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum] Length = 830 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 51/168 (30%), Gaps = 34/168 (20%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y E ++ S + +L N K+ + Sbjct: 521 KIYQ----ETINSFAEKDFS----LSNIILLKKLCNS------------KDSGKLLFVGD 560 Query: 62 IIEKAN-AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEG--K 108 +I+ I++ ++ L + + D I ++N+ + Sbjct: 561 LIKSLPRGEKIVLVSNYTQTLDIFETLCKELSFGFLRLDGQVEADSRQFLITKFNDPADQ 620 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + G G+NL G N +V F W+ Q +ER+ Q Sbjct: 621 HKVFLLSAKAGGVGINL-IGANHIVLFDPDWNPAVDLQAMERVWRQGQ 667 >gi|282883052|ref|ZP_06291653.1| superfamily II DNA and RNA helicase [Peptoniphilus lacrimalis 315-B] gi|281297109|gb|EFA89604.1| superfamily II DNA and RNA helicase [Peptoniphilus lacrimalis 315-B] Length = 2539 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 1994 FIHEADTDKQKDELFSKVRRGEVRILLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2053 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2054 RSGRIVR----QGNENNKVNIFRYVTENTFDAYLWQTIENKQKFISQIMTS 2100 >gi|325478350|gb|EGC81465.1| helicase C-terminal domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 2252 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDSYLWQTIENKQKFISQIMTS 2108 >gi|315123583|ref|YP_004065588.1| cpp14 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018838|gb|ADT66930.1| cpp14 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 1935 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 3/110 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + + N GK +L G G N+Q L W + +Q Sbjct: 1515 FIHDAKTDLQKGQLFADMNSGKARILIGSTQKMGAGTNVQKRIVALHHLDCPWRPSDLEQ 1574 Query: 147 MIERIGVTRQ---RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ + V + + T D + Q + +K+ + Sbjct: 1575 RSGRVIRQGNELFMRDPQNFRVKEFRYATERTYDARMWQVIESKARSIEQ 1624 >gi|237708935|ref|ZP_04539416.1| helicase domain-containing protein [Bacteroides sp. 9_1_42FAA] gi|229456997|gb|EEO62718.1| helicase domain-containing protein [Bacteroides sp. 9_1_42FAA] Length = 959 Score = 48.6 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T + I+E + +L G+NLQ G N ++ + L W+ +Q RI Sbjct: 523 TDEDRKMKIEELAKAPRHVLVCT-DCLSEGVNLQTGFNCVIHYDLPWNPNRMEQRNGRID 581 Query: 153 VTRQRQAGFKRAVFVYYLIAQNT--IDELVLQRLRTKSTIQDLLLN 196 Q ++ V ++ L ++T +D+++++ L K L Sbjct: 582 RFGQT----EKEVAIFTLFDEDTNPVDKIIMKVLYRKQNQIRKSLG 623 >gi|255588846|ref|XP_002534737.1| ATP-dependent helicase, putative [Ricinus communis] gi|223524658|gb|EEF27647.1| ATP-dependent helicase, putative [Ricinus communis] Length = 1167 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 57/173 (32%), Gaps = 22/173 (12%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 K + +D ++ I+A H G D+ Sbjct: 430 WLTANLKTDGQWNDRRVILFTEYRTTHQWMHEILASH--DFGGDRLAILHGGMAQDEREK 487 Query: 100 TIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + + +L A + G++LQ N L+ + ++ +Q RI Sbjct: 488 VKAAFQTSPKDSAVRILLAT-DAASEGIDLQNHCNCLIHLEIPYNPNVMEQRNGRIDRHG 546 Query: 156 QRQAGFKRAVFVYYLI-----AQNTI----DELVLQRLRTKSTIQDLLLNALK 199 QRQ + V +++ + ++TI D+++ R K + ++ Sbjct: 547 QRQ----KEVLIWHPVDGGEQGKSTIGGHGDDII--RALRKLESMRADMGSVN 593 >gi|57505091|ref|ZP_00371038.1| helicase, Snf2 family [Campylobacter coli RM2228] gi|57019134|gb|EAL55847.1| helicase, Snf2 family [Campylobacter coli RM2228] Length = 1854 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 3/110 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + + N GK +L G G N+Q L W + +Q Sbjct: 1438 FIHDAKTDLQKGQLFADMNSGKARILIGSTQKMGAGTNVQKRIVALHHLDCPWRPSDLEQ 1497 Query: 147 MIERIGVTRQ---RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ + V + + T D + Q + +K+ + Sbjct: 1498 RSGRVIRQGNELFMRDPQNFRVKEFRYATERTYDARMWQVIESKARSIEQ 1547 >gi|326479420|gb|EGE03430.1| cytosine-specific DNA methylase [Trichophyton equinum CBS 127.97] Length = 2106 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 48/158 (30%), Gaps = 2/158 (1%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK 96 + + + K A+ ++E A P ++ + K Sbjct: 1910 CHSERHTPTDKLAKYGGSKFTAVIELLEDAKRVPADDQALESARIPHTVIQPGDRTPTSK 1969 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTR 155 K +L + N ++FF ++ + R Sbjct: 1970 TSEFQNGKESVKSKVLILNLGDVTASGLNLQNANHIIFFGPLVARSQYDYNSGMAQAIGR 2029 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ G + V +Y+++A T++ + ++ R K + Sbjct: 2030 SRRYGQLKHVHIYHVLALRTVEVNIFEK-RRKQYLAKR 2066 >gi|325846329|ref|ZP_08169319.1| helicase C-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481593|gb|EGC84632.1| helicase C-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 2547 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDSYLWQTIENKQKFISQIMTS 2108 >gi|256544755|ref|ZP_05472127.1| superfamily II DNA and RNA helicase [Anaerococcus vaginalis ATCC 51170] gi|256399644|gb|EEU13249.1| superfamily II DNA and RNA helicase [Anaerococcus vaginalis ATCC 51170] Length = 2547 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDAYLWQTIENKQKFISQIMTS 2108 >gi|169824650|ref|YP_001692261.1| putative DNA methyltransfarase [Finegoldia magna ATCC 29328] gi|167831455|dbj|BAG08371.1| putative DNA methyltransfarase [Finegoldia magna ATCC 29328] Length = 2547 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDSYLWQTIENKQKFISQIMTS 2108 >gi|255604124|ref|XP_002538172.1| ATP-dependent helicase, putative [Ricinus communis] gi|223513471|gb|EEF24211.1| ATP-dependent helicase, putative [Ricinus communis] Length = 319 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 6/111 (5%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G + + L+ + G G+NLQ N++V + L W+ +Q Sbjct: 40 QIHGGIKREDRLHVQGLFRNDANTLVLLATDAAGEGVNLQN-ANLMVNYDLPWNPNRLEQ 98 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI + G ++ ++A T + V QRL K ++ L Sbjct: 99 RFGRI-----HRIGQTEVCHLWNMVAAETREGDVFQRLFAKLEVERDALGG 144 >gi|78047942|ref|YP_364117.1| putative helicase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|121593812|ref|YP_985708.1| helicase domain-containing protein [Acidovorax sp. JS42] gi|78036372|emb|CAJ24063.1| putative helicase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|120605892|gb|ABM41632.1| helicase domain protein [Acidovorax sp. JS42] Length = 759 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKQPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|237751872|ref|ZP_04582352.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229376705|gb|EEO26796.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 1935 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 3/110 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + + N GK +L G G N+Q L W + +Q Sbjct: 1515 FIHDAKTDLQKSQLFADMNTGKARILIGSTQKMGAGTNVQKRIVALHHLDCPWRPSDLEQ 1574 Query: 147 MIERIGVTRQ---RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ + V + + T D + Q + +K+ + Sbjct: 1575 RSGRVIRQGNELFMRDPQNFRVKEFRYATERTYDARMWQVIESKARSIEQ 1624 >gi|255084481|ref|XP_002508815.1| SNF2 super family [Micromonas sp. RCC299] gi|226524092|gb|ACO70073.1| SNF2 super family [Micromonas sp. RCC299] Length = 1733 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 27/86 (31%), Gaps = 6/86 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 E L +GLNL ++ D E + R + G Sbjct: 1604 EPSPKALLMPLRRGANGLNLTE-AQHVILLEPVLDPGA-----EAQAMKRVDRIGQTMPT 1657 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQ 191 V+ + Q T++E V + R + Sbjct: 1658 CVHRFLLQGTVEENVQELSRRRREAA 1683 >gi|83318951|emb|CAJ38813.1| Lodestar protein [Platynereis dumerilii] Length = 1130 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 25/136 (18%) Query: 52 HDEKIKALEVIIEKA-------NAAPIIVAYHFNSDLARLQKA----------FPQGRTL 94 KI+ + I++ N + ++ + L ++ Sbjct: 1001 PSTKIQNILEKIKEIKKESPPGNPSKCVIVSQWTKMLDVIEYHLKSEGVQCCSIRGDMPP 1060 Query: 95 DKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + +N ++ + G GLNL GGN L+ L W+ Q +RI Sbjct: 1061 KKRSEIVDLFNTPSSGPEVMLLSLRAGGVGLNL-IGGNHLIMVDLHWNPALEAQACDRI- 1118 Query: 153 VTRQRQAGFKRAVFVY 168 + G K+ VF++ Sbjct: 1119 ----YRVGQKKDVFIH 1130 >gi|291544389|emb|CBL17498.1| SNF2 family N-terminal domain [Ruminococcus sp. 18P13] Length = 790 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T K ++ G + +L G G N+Q W + +Q Sbjct: 424 FIHEADTEAKKLELFKKVRRGDVRILMGSTQKMGAGTNVQNKLAASSDLDCPWRPSDLEQ 483 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R Q V +Y + + T D + Q + K ++ + Sbjct: 484 RLGRSIR----QGNENAEVHIYRFVTEETFDAYLYQLVEGKQKFASQIMTS 530 >gi|237750669|ref|ZP_04581149.1| superfamily II DNA and RNA helicase [Helicobacter bilis ATCC 43879] gi|229373759|gb|EEO24150.1| superfamily II DNA and RNA helicase [Helicobacter bilis ATCC 43879] Length = 2282 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 40/118 (33%), Gaps = 3/118 (2%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 K Q+ N G+I +L + G G N Q + L W +Q Sbjct: 1376 HDFEGIKKETLSQKINSGEIRVLIGSTSKMGAGSNFQERLAAIHHLDLDWTPANMEQREG 1435 Query: 150 RIGV--TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN-ALKKETIH 204 RI R +Y + + D L+LQ L K+ I + + LK I Sbjct: 1436 RIIRQGNRLMDLVPDFEARIYTYVTEQMSDSLMLQTLEQKTKIIKQIQDPNLKTRVIE 1493 >gi|170289581|ref|YP_001739819.1| helicase domain-containing protein [Thermotoga sp. RQ2] gi|222100561|ref|YP_002535129.1| Helicase domain protein [Thermotoga neapolitana DSM 4359] gi|170177084|gb|ACB10136.1| helicase domain protein [Thermotoga sp. RQ2] gi|221572951|gb|ACM23763.1| Helicase domain protein [Thermotoga neapolitana DSM 4359] Length = 1013 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 70/216 (32%), Gaps = 34/216 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCL--QLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + + E ++ NS +K Q+ N + +D K+K L Sbjct: 343 YDEMELEENSEIDDLISSIINSVAKRYPLDKGQI-NALEKILKIGKAIGKNDSKLKTLAE 401 Query: 62 II--EKANAAPIIVAYHFNSDLARLQKAF--------------------PQGRTLDKDPC 99 ++ +IV F L L+ G ++ Sbjct: 402 VLAYHLKKNEKVIVFTEFKDTLEYLRNNLPTLLEQEGIHLSEEKDISVLHGGMKSEEIEK 461 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++ L GLNLQ NIL+ + + W + +Q + RI + Sbjct: 462 QVEKFANDGK--LLISTDVASEGLNLQ-VANILINYEIPWSPIKLEQRVGRIW-----RL 513 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLL 194 + Y L+ + D +L+ L K I D + Sbjct: 514 NQTKETIAYTLLLNHEADLQILESLYQKILNITDAV 549 >gi|51209527|ref|YP_063459.1| cpp14 [Campylobacter jejuni subsp. jejuni 81-176] gi|121999261|ref|YP_001004014.1| cpp14 [Campylobacter jejuni subsp. jejuni 81-176] gi|39979705|gb|AAR29548.1| cpp14 [Campylobacter jejuni subsp. jejuni 81-176] gi|87248838|gb|EAQ71802.1| cpp14 [Campylobacter jejuni subsp. jejuni 81-176] Length = 1932 Score = 48.6 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 3/110 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + + N GK +L G G N+Q L W + +Q Sbjct: 1516 FIHDAKTDLQKGQLFADMNSGKARILIGSTQKMGAGTNVQKRIVALHHLDCPWRPSDLEQ 1575 Query: 147 MIERIGVTRQ---RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ + V + + T D + Q + +K+ + Sbjct: 1576 RSGRVIRQGNELFMRDPQNFRVKEFRYATERTYDARMWQVIESKARSIEQ 1625 >gi|229607712|ref|YP_002878360.1| hypothetical protein VCD_002624 [Vibrio cholerae MJ-1236] gi|229370367|gb|ACQ60790.1| hypothetical protein VCD_002624 [Vibrio cholerae MJ-1236] Length = 746 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 24/217 (11%), Positives = 66/217 (30%), Gaps = 43/217 (19%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVII 63 L+ E ++ + ++ + D + + K+ +L + Sbjct: 368 QLENEE---SHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARALYGESGKLVSLLETL 424 Query: 64 E--KANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPCTIQ 102 + ++ I+ S + KA + +++ I Sbjct: 425 DRVRSKQEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKSVPTRKSMIS 484 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + L G N +V +W+ + E R + G + Sbjct: 485 DFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERYWNPAK-----EAQATDRVYRIGQE 539 Query: 163 RAVFVYYLIAQN----TIDELVLQRLRTKSTIQDLLL 195 + V +Y + + + D + + L K+ ++D ++ Sbjct: 540 KEVHIYIPLLHHPEFESFDVNLHRLLTQKTLLKDAVV 576 >gi|155676733|dbj|BAF75717.1| hypothetical protein [Streptococcus thermophilus] Length = 349 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 4/87 (4%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A G GLN+Q + + W + Q R+ Q + V +Y+ Sbjct: 1 ILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNGRLIR----QGNMHQEVDIYHY 56 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNA 197 I + + D + Q K ++ + Sbjct: 57 ITKGSFDNYLWQTQENKLKYITQIMTS 83 >gi|68164395|ref|YP_247529.1| hypothetical protein pTet_01 [Campylobacter jejuni subsp. jejuni 81-176] gi|60617801|gb|AAX31282.1| pTet01 [Campylobacter jejuni subsp. jejuni 81-176] Length = 1932 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 3/110 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + + N GK +L G G N+Q L W + +Q Sbjct: 1516 FIHDAKTDLQKGQLFADMNSGKARILIGSTQKMGAGTNVQKRIVALHHLDCPWRPSDLEQ 1575 Query: 147 MIERIGVTRQ---RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ + V + + T D + Q + +K+ + Sbjct: 1576 RSGRVIRQGNELFMRDPQNFRVKEFRYATERTYDARMWQVIESKARSIEQ 1625 >gi|188991828|ref|YP_001903838.1| conserved hypothetical plasmid protein [Xanthomonas campestris pv. campestris str. B100] gi|167733588|emb|CAP51793.1| conserved hypothetical plasmid protein [Xanthomonas campestris pv. campestris] Length = 759 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKEPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|66768365|ref|YP_243127.1| plasmid-related protein [Xanthomonas campestris pv. campestris str. 8004] gi|66573697|gb|AAY49107.1| plasmid-related protein [Xanthomonas campestris pv. campestris str. 8004] Length = 768 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 646 RREDWIAEQLDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQ------QAARR 699 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V V YL + L+ + K + + + + V Sbjct: 700 SWRIGQKEPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 749 >gi|296270691|ref|YP_003653323.1| helicase domain-containing protein [Thermobispora bispora DSM 43833] gi|296093478|gb|ADG89430.1| helicase domain protein [Thermobispora bispora DSM 43833] Length = 945 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 3/97 (3%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I++ + + G+NLQ ++ + L W+ H+Q R+ Q Sbjct: 510 RQQVIEDLGKESGRRVLVATDCLSEGVNLQELFQAVIHYDLAWNPTRHEQREGRVDRFGQ 569 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + RAV +Y L N ID +VL L K Sbjct: 570 -RKEIVRAVTLYGL--DNGIDGVVLDVLIRKHQTIAR 603 >gi|295829290|gb|ADG38314.1| AT2G46020-like protein [Neslia paniculata] Length = 201 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 50/158 (31%), Gaps = 41/158 (25%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVF 134 + + + +L+ I ++N+ + + G GLNLQ + +V Sbjct: 11 YLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQT-ADTVVI 69 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ--------------------- 173 + + + E V R + G R V V Y+ A Sbjct: 70 YDPDPNPKN-----EEQAVARAHRIGQTREVKVIYMEAVVEKLSSHQKEDELRTGGSVDL 124 Query: 174 -----------NTIDELVL-QRLRTKSTIQDLLLNALK 199 +I+ L+ + K + D ++NA + Sbjct: 125 EDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGR 162 >gi|295829278|gb|ADG38308.1| AT2G46020-like protein [Capsella grandiflora] gi|295829280|gb|ADG38309.1| AT2G46020-like protein [Capsella grandiflora] gi|295829282|gb|ADG38310.1| AT2G46020-like protein [Capsella grandiflora] gi|295829284|gb|ADG38311.1| AT2G46020-like protein [Capsella grandiflora] gi|295829286|gb|ADG38312.1| AT2G46020-like protein [Capsella grandiflora] gi|295829288|gb|ADG38313.1| AT2G46020-like protein [Capsella grandiflora] Length = 201 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 50/158 (31%), Gaps = 41/158 (25%) Query: 77 FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVF 134 + + + +L+ I ++N+ + + G GLNLQ + +V Sbjct: 11 YLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQT-ADTVVI 69 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ--------------------- 173 + + + E V R + G R V V Y+ A Sbjct: 70 YDPDPNPKN-----EEQAVARAHRIGQTREVKVIYMEAVVEKISSHQKEDELRSGGSVDL 124 Query: 174 -----------NTIDELVL-QRLRTKSTIQDLLLNALK 199 +I+ L+ + K + D ++NA + Sbjct: 125 EDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGR 162 >gi|300726698|ref|ZP_07060130.1| helicase domain protein [Prevotella bryantii B14] gi|299776007|gb|EFI72585.1| helicase domain protein [Prevotella bryantii B14] Length = 901 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 14/116 (12%) Query: 91 GRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + + + ++ + KI + + S G+NL Y +I+ + + W L +Q Sbjct: 432 SLSDTEQEDMVNDFAKEDSKIRVFISS-DSGSQGVNLHYFCHIMFNYDIPWSLITLEQRN 490 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTI-----DELVLQRLRTK-STIQDLLLNAL 198 RI + G K+ +YYL+A++ D ++ +LR K + D L +A+ Sbjct: 491 GRID-----RYGQKQTPVIYYLVAKSNRQDLKTDFRIIDKLRDKEQEVHDTLGDAM 541 >gi|269793671|ref|YP_003313126.1| DNA/RNA helicase [Sanguibacter keddieii DSM 10542] gi|269095856|gb|ACZ20292.1| DNA/RNA helicase, superfamily II, SNF2 family [Sanguibacter keddieii DSM 10542] Length = 1028 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 15/119 (12%) Query: 91 GRTLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ T +N + +L A A+ G++LQ + LV F + ++ +Q Sbjct: 535 SSPAEERELTRARFNADPSREPVRVLVATDAAG-EGIDLQAHCHRLVNFDVPFNPSRLEQ 593 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQ---NTI--DELVLQRLRTKSTIQDLLLNALKK 200 I RI Q QA V+ + + T D ++R+ K L ++ + Sbjct: 594 RIGRIDRYGQTQAPQ-----VFQFLPEKDSGTYGADMEFMRRIAEKVATVADDLGSVNQ 647 >gi|168698695|ref|ZP_02730972.1| putative helicase SNF2 family protein [Gemmata obscuriglobus UQM 2246] Length = 1047 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 6/95 (6%) Query: 86 KAFPQGRTLDKDPCTIQEWNE--GKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 G ++ + P+ L + GLNLQ L+ + + W+ Sbjct: 542 MTMYGGMDSEEREEVKAAFQSAPDISPVRLLLATDAAAEGLNLQNHCYRLIHYEIPWNPN 601 Query: 143 EHQQMIERIGVTRQRQA---GFKRAVFVYYLIAQN 174 +Q RI Q+ +R VFVY+ + Q Sbjct: 602 RLEQRNGRIDRHGQKGFLADSGERQVFVYHFVGQG 636 >gi|291549550|emb|CBL25812.1| hypothetical protein RTO_11420 [Ruminococcus torques L2-14] Length = 756 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G++ + A G G N+Q L + W + +Q Sbjct: 362 FIHDANTEAKKTELFGKVKSGQVRFMIGSTAKMGAGTNVQDRLIALHHLDIGWKPSDLEQ 421 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + + ++ + ++T D + Q + K ++ + Sbjct: 422 REGRIIR----QGNHNKKIHIFRYVTESTFDSYMWQLIENKQKFISQIMTS 468 >gi|325914675|ref|ZP_08177016.1| DNA/RNA helicase, superfamily II, SNF2 family [Xanthomonas vesicatoria ATCC 35937] gi|325539177|gb|EGD10832.1| DNA/RNA helicase, superfamily II, SNF2 family [Xanthomonas vesicatoria ATCC 35937] Length = 1048 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 64/213 (30%), Gaps = 21/213 (9%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV-- 61 Y + + + + ++ ++ L+ N Y +E K + L Sbjct: 803 YRRMKAD--AEQGRSSLNMVALLARISAVLKAGNQPSYKNEYFGSYMPMTSKERYLIERA 860 Query: 62 -----------IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + +A N + + E+ G Sbjct: 861 SNLAAAGRKILLYVDGPEMSERIAAELNHRGVHAVPFHGKSSIKSRTRRMNSEFRYGPAS 920 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + GLNL Y N ++ W+ ER + R + V V ++ Sbjct: 921 VLVASYGTGQTGLNL-YQANYVLLAVRAWN-----SKTERQAIARTLRPQQTSEVHVEFV 974 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 ++DE Q + K + ++ L+ E + Sbjct: 975 HLGGSLDEYQAQVCQWKQVSEFEAIDLLEPEEV 1007 >gi|261369092|ref|ZP_05981975.1| putative DEAD/DEAH box helicase [Subdoligranulum variabile DSM 15176] gi|282568780|gb|EFB74315.1| putative DEAD/DEAH box helicase [Subdoligranulum variabile DSM 15176] Length = 2744 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + GK+ +L G G N+Q L + W + +Q Sbjct: 2124 FIHDANTDAKKATLFAKVRAGKVRILMGSTQKMGAGTNVQTKLIALHHLDVPWRPSDIEQ 2183 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q +V +Y + + D Q + K ++ + Sbjct: 2184 REGRILR----QGNENPSVQIYRYATEGSFDAYSWQLIENKQKFISQIMTS 2230 >gi|242207817|ref|XP_002469761.1| predicted protein [Postia placenta Mad-698-R] gi|220731181|gb|EED85028.1| predicted protein [Postia placenta Mad-698-R] Length = 525 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 10/125 (8%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + + ++++ + + +L NIL+ Sbjct: 379 QMYGIEYETLTGTMSGRQRAEALRKFMQSDAKGVRVLVLSNVGAVGFNI--ACANILIII 436 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W ++ Q+I R+ R + V VY LIA+NT D + KS + + + Sbjct: 437 DTLWSAQDDSQLIGRLWRQR-----QLKLVHVYRLIARNTSDVFLNNISFDKSIMHNAFM 491 Query: 196 NALKK 200 + + Sbjct: 492 GSSRA 496 >gi|212695553|ref|ZP_03303681.1| hypothetical protein ANHYDRO_00070 [Anaerococcus hydrogenalis DSM 7454] gi|212677431|gb|EEB37038.1| hypothetical protein ANHYDRO_00070 [Anaerococcus hydrogenalis DSM 7454] Length = 801 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 256 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 315 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + +NT D + Q + K ++ + Sbjct: 316 RSGRIVR----QGNENDKVNIFRYVTENTFDSYLWQTIENKQKFISQIMTS 362 >gi|315059225|gb|ADT73553.1| cpp14 [Campylobacter jejuni subsp. jejuni S3] Length = 1932 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 3/110 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + + N GK +L G G N+Q L W + +Q Sbjct: 1516 FIHDAKTDLQKGQLFADMNSGKARILIGSTQKMGAGTNVQKRIVALHHLDCPWRPSDLEQ 1575 Query: 147 MIERIGVTRQ---RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ + V + + T D + Q + +K+ + Sbjct: 1576 RSGRVIRQGNELFMRDPQNFRVKEFRYATERTYDARMWQVIESKARSIEQ 1625 >gi|51209446|ref|YP_063409.1| cpp14 [Campylobacter coli] gi|39979654|gb|AAR29498.1| cpp14 [Campylobacter coli] Length = 1932 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 3/110 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + + N GK +L G G N+Q L W + +Q Sbjct: 1516 FIHDAKTDLQKGQLFADMNSGKARILIGSTQKMGAGTNVQKRIVALHHLDCPWRPSDLEQ 1575 Query: 147 MIERIGVTRQ---RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ + V + + T D + Q + +K+ + Sbjct: 1576 RSGRVIRQGNELFMRDPQNFRVKEFRYATERTYDARMWQVIESKARSIEQ 1625 >gi|169600707|ref|XP_001793776.1| hypothetical protein SNOG_03198 [Phaeosphaeria nodorum SN15] gi|160705497|gb|EAT89929.2| hypothetical protein SNOG_03198 [Phaeosphaeria nodorum SN15] Length = 2117 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 11/117 (9%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVF 134 D + +G I+++ + + +L + S N L+F Sbjct: 1924 DSHGVAYHSLRGCRGATSAKIIEDFKTNDDPDDQSKVLILNMGSESAAGANLVNANHLIF 1983 Query: 135 FSLWWDLEEHQQMIE---RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + L + Q + + R R+ + V +Y++IAQ TID +L+ R K Sbjct: 1984 VAP--LLAKTQYEYDSAMAQAIARLRRYMQTKTVHIYHVIAQRTIDVDILE-HRHKR 2037 >gi|77404497|ref|YP_345073.1| hypothetical protein pREC1_0012 [Rhodococcus erythropolis PR4] gi|77019878|dbj|BAE46253.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length = 2936 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 A + ++ +G+I +L G GLN+Q LV Sbjct: 2317 RGMKAEEIAFMHNHNSPKAKAKLMEACRDGRIRVLLTSTKKGGTGLNVQRALKQLVNLDP 2376 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 W + +Q I RI Q V V ++A+ + D ++ Q + K + Sbjct: 2377 AWTAADMEQRIGRIIR----QGNTFDKVSVVNVVARRSYDAMMYQYVARK----SAFVAQ 2428 Query: 198 LKKETI 203 L++E + Sbjct: 2429 LRREDL 2434 >gi|296421314|ref|XP_002840210.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636424|emb|CAZ84401.1| unnamed protein product [Tuber melanosporum] Length = 1119 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 6/124 (4%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I ++ +A + +K + + + Sbjct: 841 IFYESEDVAFYIAQGLEIIGVEYLGYQKNLPSHEKAKYLVTFQFSQTFRVFLMDLSQAAF 900 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLN+ + + F + Q +E + R + G KR V+ LI +TI+ + Sbjct: 901 GLNI-SAASRIFFVNP-----VWQPSVEHQALARAHRIGQKRPVYAETLILNHTIEREMW 954 Query: 182 QRLR 185 R + Sbjct: 955 DRRQ 958 >gi|281358272|ref|ZP_06244755.1| type III restriction protein res subunit [Victivallis vadensis ATCC BAA-548] gi|281315362|gb|EFA99392.1| type III restriction protein res subunit [Victivallis vadensis ATCC BAA-548] Length = 1610 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 4/113 (3%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T + N G + ++ G G+N+Q + + + +Q R+ Sbjct: 1290 TDKQRQEVFDMVNSGDVRVIMGSTQKLGTGVNMQERLAVEHDLDAPFRPADAEQRTGRLV 1349 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 Q V V T+D + Q L K + L ++ + Sbjct: 1350 R----QGNILPEVEVIRYGMAETLDAGMYQILTRKQKFINDALKGKRRNMDEI 1398 >gi|121593689|ref|YP_985585.1| helicase domain-containing protein [Acidovorax sp. JS42] gi|120605769|gb|ABM41509.1| helicase domain protein [Acidovorax sp. JS42] Length = 759 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKQPVRVIYLGYSGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|329940571|ref|ZP_08289852.1| helicase SNF2 family protein [Streptomyces griseoaurantiacus M045] gi|329300632|gb|EGG44529.1| helicase SNF2 family protein [Streptomyces griseoaurantiacus M045] Length = 1067 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 50/127 (39%), Gaps = 22/127 (17%) Query: 91 GRTLDKDPCTIQEW----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ + ++ + +L A ++ G++LQ + LV F + ++ +Q Sbjct: 574 STPTEEREKIRARFTESPDKHPVRVLLATDSAG-EGIDLQTHCHRLVNFDIPFNPSRLEQ 632 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLI---AQNTIDELV--LQRLRTKSTIQ-------DLL 194 I RI + G + +++ + + T D + + + TK + + Sbjct: 633 RIGRID-----RYGQTKHPEIFHFVPVSSSTTYDADMKFMGIIATKVGQATEDLGKVNQV 687 Query: 195 LNALKKE 201 ++A +E Sbjct: 688 IDAEVQE 694 >gi|325093103|gb|EGC46413.1| SNF2 family helicase [Ajellomyces capsulatus H88] Length = 2239 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 6/98 (6%) Query: 101 IQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTR 155 I E+ + +L H N ++FF + ++ + R Sbjct: 2086 IAEFQTRAEKVESKVLILHLGDVSASGLNLQNANHVIFFHPLFTKSQYDYNSGMAQAIGR 2145 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ G ++ V +Y+ +A TI+ + + R + + Sbjct: 2146 SRRYGQQKHVHIYHFLALKTIEVNIFE-QRRRERLVKR 2182 >gi|317157659|ref|XP_001826363.2| C-5 cytosine-specific DNA methylase [Aspergillus oryzae RIB40] Length = 2165 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 14/138 (10%) Query: 54 EKIKALEVIIEKAN-AAPIIVAYHF--------NSDLARLQKAFPQGRTLDKDPCTIQEW 104 K+ + II+ I++ F + K T + +Q + Sbjct: 1982 SKLDKMIEIIQAVPTGDRILLFIQFPELIDVTSKALELAKIKYIAIIATDRRAAQKVQHF 2041 Query: 105 NE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH-QQMIERIGVTRQRQA 159 E G+ +L + S N ++F S + ++ + R R+ Sbjct: 2042 QEAGGFGENKVLILNLGSEMAAGLNLQCANHVIFLSPMFAQTQYDYDSSMTQAIGRARRY 2101 Query: 160 GFKRAVFVYYLIAQNTID 177 G + V++Y+L+A+ TID Sbjct: 2102 GQTKHVYIYHLLARMTID 2119 >gi|157118619|ref|XP_001659181.1| snf2 histone linker phd ring helicase [Aedes aegypti] gi|108883243|gb|EAT47468.1| snf2 histone linker phd ring helicase [Aedes aegypti] Length = 1114 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 13/138 (9%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP-----CTIQEWNE--GK 108 ++ + + + II+ H++ L L +A Q + ++E+ + + Sbjct: 953 VETILQLKHQEPQVKIIIFSHWDPILTMLARALDQNDITYRAKTSKFYKGVEEFKDYSKE 1012 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + + GLNL + + E V R + G + FV+ Sbjct: 1013 LTCMLLPLKYGSKGLNLTE-ATHVFLVEPILNPG-----EELQAVGRVHRIGQTKPTFVH 1066 Query: 169 YLIAQNTIDELVLQRLRT 186 I Q TI+E + + ++ Sbjct: 1067 RFIVQQTIEETIHRTIQN 1084 >gi|156044490|ref|XP_001588801.1| hypothetical protein SS1G_10348 [Sclerotinia sclerotiorum 1980] gi|154694737|gb|EDN94475.1| hypothetical protein SS1G_10348 [Sclerotinia sclerotiorum 1980 UF-70] Length = 98 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N + W+ ++E + R ++ G R V ++ I ++T+++ + R Sbjct: 26 LTISNYVYILEPQWNP-----IVESQAIARVQRIGQNRNVKIFRYIVEDTVEKGIQNRQS 80 Query: 186 TKSTIQDL 193 K + Sbjct: 81 RKLNFAKM 88 >gi|303274797|ref|XP_003056713.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461065|gb|EEH58358.1| predicted protein [Micromonas pusilla CCMP1545] Length = 81 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 6/77 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + +L H + GL L ++++ + + E R + G R V Sbjct: 1 DPDVKVLLLHAGTAAAGLTLTQ-ADLVILLEPFLSPGD-----EAQAANRVHRIGQTRPV 54 Query: 166 FVYYLIAQNTIDELVLQ 182 +T++E +L Sbjct: 55 RCVTYYVSDTVEERLLA 71 >gi|222778489|ref|YP_002576126.1| DNA methylase/helicase [Campylobacter lari RM2100] gi|222539774|gb|ACM64874.1| DNA methylase/helicase [Campylobacter lari RM2100] Length = 1934 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 3/110 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + + N GK +L G G N+Q L W + +Q Sbjct: 1514 FIHDAKTDLQKGQLFSDMNSGKARILIGSTQKMGAGTNVQKRIVALHHLDCPWRPSDLEQ 1573 Query: 147 MIERIGVTRQ---RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ + V + + T D + Q + +K+ + Sbjct: 1574 RSGRVIRQGNELFMRDPQNFRVKEFRYATERTYDARMWQVIESKARSIEQ 1623 >gi|254582851|ref|XP_002499157.1| ZYRO0E05192p [Zygosaccharomyces rouxii] gi|238942731|emb|CAR30902.1| ZYRO0E05192p [Zygosaccharomyces rouxii] Length = 1520 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 61/203 (30%), Gaps = 26/203 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + + + G I+ +K E + +E + + + Sbjct: 1305 EEVHKMVIKESFGAKIDFVIKLILFLKLK---------SESESDQEDPPQILMYSQSFEF 1355 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + ++ Y + I L + S G GLN Sbjct: 1356 LKVISKVLNIYEIKHLSCWANVTNVG-------EAISKFKRNTSITCLLLNVKSLGAGLN 1408 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ-- 182 L + + + E ++R + G + +V+ + +N+++E + + Sbjct: 1409 LLN-ARHVFLLDPIIN-----RGDELQAMSRNNRIGQTKETYVWNFMIKNSVEENIFKYK 1462 Query: 183 -RLRTKSTIQDLLLNALKKETIH 204 L + + L +K+E + Sbjct: 1463 CVLEGRRRLLGEKLK-VKQENLD 1484 >gi|242226668|ref|XP_002477623.1| predicted protein [Postia placenta Mad-698-R] gi|220722552|gb|EED77178.1| predicted protein [Postia placenta Mad-698-R] Length = 620 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 10/125 (8%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + + + + + + +L NIL+ Sbjct: 362 QMYGIEYETLTGTMSGRRRAEALHNFMQSDAKGVRVLVLSNVGAVGFNI--ACANILIII 419 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W ++ Q+I R+ R + V VY LIA+NT D + KS + + + Sbjct: 420 DTLWSAQDDSQLIGRLWRQR-----QLKLVHVYRLIARNTSDVFLNNISFDKSIMHNAFM 474 Query: 196 NALKK 200 + + Sbjct: 475 GSSRA 479 >gi|238493629|ref|XP_002378051.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] gi|220696545|gb|EED52887.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357] Length = 2055 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 14/138 (10%) Query: 54 EKIKALEVIIEKAN-AAPIIVAYHF--------NSDLARLQKAFPQGRTLDKDPCTIQEW 104 K+ + II+ I++ F + K T + +Q + Sbjct: 1872 SKLDKMIEIIQAVPTGDRILLFIQFPELIDVASKALELAKIKYIAIIATDRRAAQKVQHF 1931 Query: 105 NE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH-QQMIERIGVTRQRQA 159 E G+ +L + S N ++F S + ++ + R R+ Sbjct: 1932 QEAGGFGENKVLILNLGSEMAAGLNLQCANHVIFLSPMFAQTQYDYDSSMTQAIGRARRY 1991 Query: 160 GFKRAVFVYYLIAQNTID 177 G + V++Y+L+A+ TID Sbjct: 1992 GQTKHVYIYHLLARMTID 2009 >gi|121608160|ref|YP_995967.1| helicase domain-containing protein [Verminephrobacter eiseniae EF01-2] gi|121552800|gb|ABM56949.1| helicase domain protein [Verminephrobacter eiseniae EF01-2] Length = 1031 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 57/155 (36%), Gaps = 31/155 (20%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCTIQEWN----EG 107 + N +I+ + + +Q+ G ++ + + Sbjct: 516 EWNDRRVILFTEYRTTHQWMQQILASHGFGSERLGLLHGGLPQEEREPIKAAFQASPQDS 575 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +L A + G++LQ N+L+ + ++ +Q RI QR ++ V + Sbjct: 576 PVRILLAT-DAASEGIDLQNHCNLLIHLEIPYNPNVMEQRNGRIDRHGQR----EKEVLI 630 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++ + E +L+ LR L++++ + Sbjct: 631 WHPV-DGGHGEDILRALRK--------LDSMRADM 656 >gi|325272684|ref|ZP_08139038.1| helicase domain-containing protein [Pseudomonas sp. TJI-51] gi|324102195|gb|EGB99687.1| helicase domain-containing protein [Pseudomonas sp. TJI-51] Length = 1671 Score = 48.2 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 12/127 (9%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + E N G++ ++ A G G+N+Q L W + +Q Sbjct: 1282 YIHEANTDLQKAKLFAEMNAGEVRIILGSTAKMGAGMNVQRRLVALHHLDAPWRPSDLEQ 1341 Query: 147 M---IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR---------TKSTIQDLL 194 IER G + + + T D + Q + K + Sbjct: 1342 RDGRIERQGNLFYEMDPDGFEIEILRYATKQTYDSRMWQTIEFKAAGIEQFRKGDSLQRV 1401 Query: 195 LNALKKE 201 + + E Sbjct: 1402 IEDVASE 1408 >gi|239612021|gb|EEQ89008.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3] Length = 433 Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 22/52 (42%) Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R +R + +R V ++ QN+ID+ + K+ + ++ + Sbjct: 226 PWSNRHAFSRIFRIRQQRNVEFVRIVVQNSIDDRIQLIQNEKTDGIEQVIGS 277 >gi|206600246|ref|YP_002241852.1| gp65 [Mycobacterium phage Ramsey] gi|206287334|gb|ACI12677.1| gp65 [Mycobacterium phage Ramsey] Length = 446 Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 18/117 (15%), Positives = 46/117 (39%), Gaps = 8/117 (6%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 D+ + + +G+ +L P+ GLN Q+ + + F + E++ Sbjct: 335 HGSLDPDEKAQLLLGFADGQFEVLVTKPSIASQGLNYQH-CHRMAFVGMGDSYEQYY--- 390 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + R + G + V+ + ++++ ++ + + K + AL +E V Sbjct: 391 --QAIRRCYRYGQTKVVYAHVIVSE--LESQIAANVARKEQQAGDITRALVEEMRRV 443 >gi|326777771|ref|ZP_08237036.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] gi|326658104|gb|EGE42950.1| SNF2-related protein [Streptomyces cf. griseus XylebKG-1] Length = 973 Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 5/83 (6%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + G+NLQ+ + +V + L W+ H Q R+ Q++ V Sbjct: 540 DPAARRVLVATDCLSEGVNLQHHFDAVVHYDLAWNPTRHDQREGRVDRYGQKRDK----V 595 Query: 166 FVYYLI-AQNTIDELVLQRLRTK 187 V L N ID VL+ L K Sbjct: 596 RVITLYGIDNGIDGKVLEVLIAK 618 >gi|242055593|ref|XP_002456942.1| hypothetical protein SORBIDRAFT_03g046010 [Sorghum bicolor] gi|241928917|gb|EES02062.1| hypothetical protein SORBIDRAFT_03g046010 [Sorghum bicolor] Length = 1175 Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 44/128 (34%), Gaps = 18/128 (14%) Query: 70 PIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 +I+ F + + K ++ + L + Sbjct: 1014 KVIIFSQFLEHIHVIQQQLTIAGIIYAGMYSPMPLASKRSALMKFQEDPTCMALVM-DGT 1072 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GL+L + ++ + +W + +E ++R + G R + V L + T++E Sbjct: 1073 AALGLDLSFVTHVFLMEPIWD------RSMEEQVISRAHRMGATRPIHVETLAMRGTVEE 1126 Query: 179 LVLQRLRT 186 +L+ L+ Sbjct: 1127 QMLRLLQD 1134 >gi|254384442|ref|ZP_04999783.1| helicase domain containing protein [Streptomyces sp. Mg1] gi|194343328|gb|EDX24294.1| helicase domain containing protein [Streptomyces sp. Mg1] Length = 976 Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 6/85 (7%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A G+NLQ+ + ++ + L W+ H Q R+ Q++ V V Sbjct: 555 RVLIAT-DCLSEGVNLQHYFDAVLHYDLAWNPTRHDQREGRVDRYGQKRD----EVRVIT 609 Query: 170 LIAQN-TIDELVLQRLRTKSTIQDL 193 L + ID VL+ L K Sbjct: 610 LYGDDNGIDGKVLEVLIKKHRQIKK 634 >gi|326471326|gb|EGD95335.1| hypothetical protein TESG_02821 [Trichophyton tonsurans CBS 112818] Length = 2122 Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 37/98 (37%), Gaps = 6/98 (6%) Query: 101 IQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTR 155 I E+ GK +L + N ++FF ++ + R Sbjct: 1986 ISEFQNGKESVKSKVLILNLGDVTASGLNLQNANHIIFFGPLVARSQYDYNSGMAQAIGR 2045 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ G + V +Y+++A T++ + ++ R K + Sbjct: 2046 SRRYGQLKHVHIYHVLALRTVEVNIFEK-RRKQYLAKR 2082 >gi|29841251|gb|AAP06283.1| similar to XM_051720 TBP associated factor in Homo sapiens [Schistosoma japonicum] Length = 106 Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%) Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R + G R V VY LI +N+++E ++ K + +L Sbjct: 1 MDRAHRIGQLRTVNVYRLITENSVEEQIMNLQAFKLYLATTVL 43 >gi|15643750|ref|NP_228798.1| hypothetical protein TM0990 [Thermotoga maritima MSB8] gi|4981530|gb|AAD36069.1|AE001761_1 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 967 Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 70/216 (32%), Gaps = 34/216 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCL--QLANGAVYYDEEKHWKEVHDEKIKALEV 61 Y + + E ++ NS +K Q+ N + +D K+K L Sbjct: 297 YDEMELEENSEIDDLISSIINSVAKRYPLDKGQI-NALEKILKIGKAIGKNDSKLKTLAE 355 Query: 62 II--EKANAAPIIVAYHFNSDLARLQKAF--------------------PQGRTLDKDPC 99 ++ +IV F L L+ G ++ Sbjct: 356 VLAYHLKKNEKVIVFTEFKDTLEYLRNNLPTLLEQEGIHLSEEKDISVLHGGMKSEEIEK 415 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++ L GLNLQ NIL+ + + W + +Q + RI + Sbjct: 416 QVEKFANDGK--LLISTDVASEGLNLQ-VANILINYEIPWSPIKLEQRVGRIW-----RL 467 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDLL 194 + Y L+ + D +L+ L K I D + Sbjct: 468 NQTKETIAYTLLLNHEADLQILESLYQKILNITDAV 503 >gi|296163358|ref|ZP_06846116.1| helicase domain protein [Burkholderia sp. Ch1-1] gi|295886390|gb|EFG66250.1| helicase domain protein [Burkholderia sp. Ch1-1] Length = 1676 Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 3/110 (2%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + T + + N G ++ A G G N+Q W Sbjct: 1281 HEIRFIHEATTDLQKAKLFDDMNRGHSRIMLGSTAKMGAGTNVQRRLVAEHHLDAPWRPS 1340 Query: 143 EHQQMIERIGVTRQR---QAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + +Q RI + V + + T D + Q + K+ Sbjct: 1341 DLEQREGRILRQGNLFYEEDPDGFEVEILRYATKQTYDSRMWQTIEYKAA 1390 >gi|134287795|ref|YP_001109960.1| helicase domain-containing protein [Burkholderia vietnamiensis G4] gi|134132445|gb|ABO60428.1| helicase domain protein [Burkholderia vietnamiensis G4] Length = 1853 Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 3/110 (2%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + T + + N G ++ A G G N+Q W Sbjct: 1458 HEIRFIHEATTDLQKAKLFDDMNRGHSRIMIGSTAKMGAGTNVQRRLVAEHHLDAPWRPS 1517 Query: 143 EHQQMIERIGVTRQR---QAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + +Q RI + V + + T D + Q + K+ Sbjct: 1518 DLEQREGRILRQGNLFYEEDPDGFEVEILRYATKQTYDSRMWQTIEYKAA 1567 >gi|120536967|ref|YP_957025.1| helicase domain-containing protein [Marinobacter aquaeolei VT8] gi|120326801|gb|ABM21110.1| helicase domain protein [Marinobacter aquaeolei VT8] Length = 2570 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + G+I L G G N+Q L W + +Q Sbjct: 2131 FIHSAKTDADKEEMFAKCRSGEIRFLLGSTQKMGVGTNVQERLVALHELDPPWKPADIEQ 2190 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + R+ Q + Y + ++ D + + L K + + + Sbjct: 2191 RLGRMDR----QGNSFETAYSYRYVTVDSFDLFMWETLNRKLKMVNQAM 2235 >gi|312222342|emb|CBY02282.1| hypothetical protein [Leptosphaeria maculans] Length = 2343 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 7/116 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIP------LLFAHPASCGHGLNLQYGGNILV 133 D + P + I+++ + P ++ + G+NL +I+ Sbjct: 2155 DHFEIPYYSPTRCRAAQSAKIIEDFKNNENPDERRKLVILNLGSESAAGINLTNANHIIF 2214 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 L + + R R+ G K+ V++Y+++A+ TID +++ R K Sbjct: 2215 VSPLAAKTQYEYDSAMVQAIARSRRYGQKKKVYIYHVVAERTIDVDIME-HRHKRN 2269 >gi|225430368|ref|XP_002282890.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 502 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 17/157 (10%), Positives = 42/157 (26%), Gaps = 22/157 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---------- 51 + Y Y L + + ++ +L + + E Sbjct: 347 EYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDATEAYKLLLE 406 Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLD-------KDPCTIQ 102 K++ L+ ++ K +++ F L L+ + I Sbjct: 407 SSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKYERIDGKVGGAERQVRID 466 Query: 103 EWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSL 137 +N + G G+NL + ++ + Sbjct: 467 RFNAKNSSRFCFLLSTRAGGLGINL-ATADTVIIYDR 502 >gi|162453805|ref|YP_001616172.1| SNF2/RAD54 family helicase [Sorangium cellulosum 'So ce 56'] gi|161164387|emb|CAN95692.1| putative SNF2/RAD54 family helicase [Sorangium cellulosum 'So ce 56'] Length = 563 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 67/219 (30%), Gaps = 39/219 (17%) Query: 2 KQYHK----FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK 57 + Y + F+RE+ DL + ++ + ++ Q + V Sbjct: 358 ELYAQAWTAFRREM--DLLPKGANPKSALAAMLRLRQ----------KSSLIRVGSTVEL 405 Query: 58 ALEVIIEKANAAPIIVAYHFNSDLA---------RLQKAFPQGRTLDKDPCTIQ-EWNEG 107 E++ N + V+ F L R+ A G + + + G Sbjct: 406 VRELL---DNGHQVAVSVAFMETLEAVEAALARERVPCALIHGALPAGEKEAERLRFQRG 462 Query: 108 KIPLLFAHPASCGHGLNLQYGG--NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + ++ ++ V L W + Q+ R + Sbjct: 463 EPRVVLFTVEEGISLHQGEHNEVPRSAVIHDLRWSAIQMAQIEGRCHRNGRFA------- 515 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 VY+ A +T+++ + + + ++ ET+H Sbjct: 516 QVYWAYADDTVEDKIAAIVCRRIRSMKAMVGDDV-ETMH 553 >gi|10957432|ref|NP_051666.1| ATP-dependent helicase HepA [Deinococcus radiodurans R1] gi|6460861|gb|AAF12565.1|AE001826_34 ATP-dependent helicase HepA [Deinococcus radiodurans R1] Length = 941 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 6/106 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T D+ ++E + +L A G+NLQ + ++ + L W+ Q R+ Sbjct: 515 HTPDERVDRVEELARAERRVLVAT-DCLSEGINLQAAFSAVIHYDLPWNPTRLDQREGRV 573 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDLLLN 196 Q V V + ++ ID L+L+ L K + L Sbjct: 574 DRYGQASP----EVRVLTIYGEDNRIDTLILEVLVRKHRLIRATLG 615 >gi|154281551|ref|XP_001541588.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150411767|gb|EDN07155.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 550 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 6/98 (6%) Query: 101 IQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTR 155 I E+ +L H N ++FF + ++ R Sbjct: 420 IAEFQTRAEKVGSKVLILHLGDVSASGLNLQNANHVIFFHPLFTKSQYDYNSGMAQATGR 479 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ G ++ V +Y+ +A TI+ + + R + + Sbjct: 480 SRRYGQQKHVHIYHFLALKTIEVNIFE-QRRRERLVKR 516 >gi|240147298|ref|ZP_04745899.1| putative superfamily II DNA and RNA helicase [Roseburia intestinalis L1-82] gi|257200514|gb|EEU98798.1| putative superfamily II DNA and RNA helicase [Roseburia intestinalis L1-82] Length = 1438 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + G++ L G G N+Q L + W + +Q Sbjct: 1299 FIHDANTELRKAELFGKVRSGQVRFLLGSTQKMGAGTNVQDRLIALHHLDVPWRPSDIEQ 1358 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + + T D Q + K ++ + Sbjct: 1359 QEGRILR----QGNLNPKVKIFRYVTEGTFDSYSWQLIENKQKFIGQIMTS 1405 >gi|182676880|ref|YP_001831027.1| helicase domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182636510|gb|ACB97283.1| helicase domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 1693 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 4/103 (3%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + N GK+ L + G G+N Q L + W + +Q RI Sbjct: 1339 KQRLFNDVNAGKVRFLIGSTQTMGTGVNAQQRLIALHHLDVPWLPSDIEQREGRIER--- 1395 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 Q + ++ +A+ ++D Q L K+ D+ ++ + Sbjct: 1396 -QGNQNAEIRLFAYVAKGSVDATGWQLLERKARFIDMAMSGDR 1437 >gi|315043012|ref|XP_003170882.1| hypothetical protein MGYG_06873 [Arthroderma gypseum CBS 118893] gi|311344671|gb|EFR03874.1| hypothetical protein MGYG_06873 [Arthroderma gypseum CBS 118893] Length = 1118 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 7/90 (7%) Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 A G L VF + IE + R + R V+V L+ ++ Sbjct: 889 SVAKVGASHGLHIAAASRVFI---VNP-IWDPNIESQAIKRAHRISQTRPVYVETLVLKD 944 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETIH 204 T+++ +L+R + + + +K+ + Sbjct: 945 TLEDKMLRR---RKAMTSTEMQHAEKDMLD 971 >gi|291614396|ref|YP_003524553.1| DNA methylase N-4/N-6 domain protein [Sideroxydans lithotrophicus ES-1] gi|291584508|gb|ADE12166.1| DNA methylase N-4/N-6 domain protein [Sideroxydans lithotrophicus ES-1] Length = 843 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 55/152 (36%), Gaps = 13/152 (8%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQ------KAFPQGRTLDKDPCTIQEWNE 106 ++ ++ +A +V + + +Q + + LD I ++++ Sbjct: 302 SARVAKAAELVNEAPDDHFVVWHDLEDERREIQTVLPEAMSVWGSQDLDAREQRIIDFSD 361 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 GK +L P G G N Q + +F + + + + R ++ + V Sbjct: 362 GKYRILSTKPIIAGSGCNFQRHCHREIFSGIGFKFNDFI-----QAIHRVQRFQQEFEVR 416 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + + + + +L+ L K ++N + Sbjct: 417 IDIIHTE--AEREILRTLLAKWEQHKDMVNKV 446 >gi|4140506|gb|AAD04088.1| active gene-repairing helicase [Chlamydia trachomatis] Length = 79 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 5/66 (7%), Positives = 20/66 (30%), Gaps = 3/66 (4%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSD 80 + + + Q+ + + + K L ++ + +V + Sbjct: 3 IHVLATLTRLKQICCHPAIFA-KDTPEPGDSAKYDMLMDLLSSLVDSGHKTVVFSQYTKM 61 Query: 81 LARLQK 86 L +++ Sbjct: 62 LGIIRQ 67 >gi|160934679|ref|ZP_02082065.1| hypothetical protein CLOLEP_03552 [Clostridium leptum DSM 753] gi|156866132|gb|EDO59504.1| hypothetical protein CLOLEP_03552 [Clostridium leptum DSM 753] Length = 1014 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 10/158 (6%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFN---SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 E+ D KI + E +I + + ++ Q K + + + Sbjct: 760 ELVDRKIASGERVIIYTAWTRLDTQSKLHKLLTERGIRTAVLDQKVPTTKREAWVDKRIQ 819 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA-V 165 +L +P GL+L L+F+++ ++L I R R + V Sbjct: 820 EDTKVLIVNPMLVETGLDL-NAFTTLIFYNVAYNL-----YIFRQASRRSWRINQTAPKV 873 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 VY Q+T+ + L+ + +K + ++ + +E + Sbjct: 874 EVYMFYYQDTMQQRALRLMASKLSAATVIEGNVSEEGL 911 >gi|322708293|gb|EFY99870.1| putative protein RIS1 [Metarhizium anisopliae ARSEF 23] Length = 897 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 32/124 (25%), Gaps = 6/124 (4%) Query: 74 AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 F K + + + G LN+ N ++ Sbjct: 758 GSMLKHARIGFVYYFGSMGDKKKKKALEMFKKSPTTNVFLSGLMAGGQSLNIT-CANRII 816 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 WW++ R + G + +V + D V + ++KS D Sbjct: 817 IIDPWWNVTSEL-----QAAGRTSRIGQTKKCYVVRIFTSAATDARVAELQKSKSEEVDH 871 Query: 194 LLNA 197 L Sbjct: 872 ALQD 875 >gi|308080914|ref|NP_001183699.1| hypothetical protein LOC100502292 [Zea mays] gi|238013978|gb|ACR38024.1| unknown [Zea mays] Length = 265 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 24/54 (44%) Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + R + G +R V V+ L+ +++EL+ R K + ++ ++ Sbjct: 11 WNPAQDLQAQDRSFRYGQRRHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAVSG 64 >gi|302824252|ref|XP_002993771.1| hypothetical protein SELMODRAFT_431801 [Selaginella moellendorffii] gi|300138421|gb|EFJ05190.1| hypothetical protein SELMODRAFT_431801 [Selaginella moellendorffii] Length = 412 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 49/151 (32%), Gaps = 32/151 (21%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--------DEKIKALEVIIEKAN----- 67 F S ++ Q+ + E ++ + + +AL+ + +A Sbjct: 258 NRFKILSMLLRLRQMCDHPALLKSEDLFQGDNLDNDDEDQKQMRQALKKLQLEAQEKQHD 317 Query: 68 -------AAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWN-EGKI 109 +V + S L ++ + K I +N + ++ Sbjct: 318 FERDDSLGEKSLVFSQWTSMLDLIELELECSGIKFARIDGSMNMTKREAAIGRFNKDPEV 377 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +L + G GLNL + ++ +WW+ Sbjct: 378 MVLLLSLRAAGCGLNLVA-ASRVLLIDMWWN 407 >gi|291530019|emb|CBK95604.1| DNA methylase [Eubacterium siraeum 70/3] Length = 2877 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T K ++ G++ +L G G N+Q W + +Q Sbjct: 2509 FIHEADTEAKKQELFKKVRRGEVRILMGSTQKMGAGTNVQNKIIASHDLDCPWRPADLEQ 2568 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R Q V +Y + + T D Q + K ++ + Sbjct: 2569 RAGRTVR----QGNENPKVGLYRYVTEGTFDAYCWQLVEGKQKFSSQIMTS 2615 >gi|239835171|ref|ZP_04683497.1| DNA methylase [Ochrobactrum intermedium LMG 3301] gi|239821147|gb|EEQ92718.1| DNA methylase [Ochrobactrum intermedium LMG 3301] Length = 3526 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 31/108 (28%), Gaps = 3/108 (2%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R T + + G+I +L G G N+Q L W Sbjct: 1835 REIAFIHDANTDLQKQELFGKVRSGQIRVLIGSTPKMGAGTNVQNRLVALHHLDAPWRPS 1894 Query: 143 EHQQMIERIGVTR---QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + +Q RI V ++ + T+D Q + K Sbjct: 1895 DLEQREGRIIRQGNELYAADPDGFEVEIHRYGTERTLDAKQWQTIEQK 1942 >gi|91974494|ref|YP_567153.1| helicase-like protein [Rhodopseudomonas palustris BisB5] gi|91680950|gb|ABE37252.1| helicase-like protein [Rhodopseudomonas palustris BisB5] Length = 924 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 2/94 (2%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + E I L + GLNLQ G ++ L W+ +Q I RI Sbjct: 749 EREQIKKAVKERTIR-LVVATDAACEGLNLQTLGTLIN-VDLPWNPSRLEQRIGRIKRFG 806 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 QR+ VY+ Q T+DE V Q+L ++ Sbjct: 807 QRRERVDMLNLVYHGSQQLTVDEKVYQKLSSRMK 840 >gi|326915689|ref|XP_003204146.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like, partial [Meleagris gallopavo] Length = 118 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + KI +L + +GLN+ ++ + Q I R+ + G Sbjct: 6 FKYDPKINILLLPLHTGSNGLNI-IEATHVLLVEPILNPAHELQAIGRV-----HRIGQT 59 Query: 163 RAVFVYYLIAQNTIDELVLQRLR 185 ++ V+ + + TI+E + L+ Sbjct: 60 KSTIVHRFLIKATIEERMQTMLK 82 >gi|119952794|ref|YP_950168.1| putative helicase [Arthrobacter aurescens TC1] gi|119951924|gb|ABM10833.1| putative helicase [Arthrobacter aurescens TC1] Length = 1829 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 4/90 (4%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+I +L + G G N+Q LV W + +Q RI Q V Sbjct: 1432 SGQIAVLVGSTSKMGVGTNIQKRAVHLVDMDAPWRPADVEQRHGRILR----QGNQNPEV 1487 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ + + D + Q L KS + ++ Sbjct: 1488 RISQVVTKESFDSFMWQGLERKSRFINQIM 1517 >gi|302797434|ref|XP_002980478.1| hypothetical protein SELMODRAFT_6816 [Selaginella moellendorffii] gi|300152094|gb|EFJ18738.1| hypothetical protein SELMODRAFT_6816 [Selaginella moellendorffii] Length = 89 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 6/80 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ +GLNL ++ + +E + R + G + V+ Sbjct: 1 VMLLPIQHGANGLNL-IEAQHVILVEPLLNPA-----VEAQAINRVHRIGQRLKTLVHRF 54 Query: 171 IAQNTIDELVLQRLRTKSTI 190 I NT++E + + + K+ + Sbjct: 55 IICNTVEENIYKMSQQKTNL 74 >gi|290956132|ref|YP_003487314.1| helicase SNF2 family protein [Streptomyces scabiei 87.22] gi|260645658|emb|CBG68749.1| putative helicase SNF2 family protein [Streptomyces scabiei 87.22] Length = 988 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 6/85 (7%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A G+NLQ+ + +V + L W+ H Q R+ QR K V V Sbjct: 558 RVLIAT-DCLSEGVNLQHHFDAVVHYDLAWNPTRHDQREGRVDRYGQR----KDQVRVIT 612 Query: 170 LIAQN-TIDELVLQRLRTKSTIQDL 193 L + ID VL+ L K Sbjct: 613 LYGDDNGIDGKVLEVLIKKHRQIKK 637 >gi|129282387|gb|ABO30185.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccon] gi|129282389|gb|ABO30186.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccon] gi|129282391|gb|ABO30187.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccon] gi|129282393|gb|ABO30188.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccon] gi|129282395|gb|ABO30189.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccon] gi|129282397|gb|ABO30190.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccon] gi|129282399|gb|ABO30191.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccon] gi|129282401|gb|ABO30192.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccon] gi|129282403|gb|ABO30193.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccon] gi|129282405|gb|ABO30194.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccon] gi|129282407|gb|ABO30195.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccon] gi|129282409|gb|ABO30196.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282411|gb|ABO30197.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282413|gb|ABO30198.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282415|gb|ABO30199.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282417|gb|ABO30200.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282419|gb|ABO30201.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282421|gb|ABO30202.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282423|gb|ABO30203.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282425|gb|ABO30204.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282427|gb|ABO30205.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282429|gb|ABO30206.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282431|gb|ABO30207.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282433|gb|ABO30208.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282435|gb|ABO30209.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282437|gb|ABO30210.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282439|gb|ABO30211.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282441|gb|ABO30212.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282443|gb|ABO30213.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282445|gb|ABO30214.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282447|gb|ABO30215.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282449|gb|ABO30216.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282451|gb|ABO30217.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282453|gb|ABO30218.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282455|gb|ABO30219.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282457|gb|ABO30220.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccoides] gi|129282459|gb|ABO30221.1| SNF2 family N-terminal domain protein [Triticum timopheevii subsp. armeniacum] gi|129282461|gb|ABO30222.1| SNF2 family N-terminal domain protein [Triticum timopheevii subsp. armeniacum] gi|129282463|gb|ABO30223.1| SNF2 family N-terminal domain protein [Triticum timopheevii subsp. armeniacum] gi|129282465|gb|ABO30224.1| SNF2 family N-terminal domain protein [Triticum timopheevii subsp. armeniacum] gi|129282467|gb|ABO30225.1| SNF2 family N-terminal domain protein [Triticum timopheevii subsp. armeniacum] gi|129282469|gb|ABO30226.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282471|gb|ABO30227.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282473|gb|ABO30228.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282475|gb|ABO30229.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282477|gb|ABO30230.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282479|gb|ABO30231.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282481|gb|ABO30232.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282483|gb|ABO30233.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282485|gb|ABO30234.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282487|gb|ABO30235.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282489|gb|ABO30236.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282491|gb|ABO30237.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282493|gb|ABO30238.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282495|gb|ABO30239.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282497|gb|ABO30240.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282499|gb|ABO30241.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282501|gb|ABO30242.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282503|gb|ABO30243.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282505|gb|ABO30244.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282507|gb|ABO30245.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282509|gb|ABO30246.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282511|gb|ABO30247.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282513|gb|ABO30248.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282515|gb|ABO30249.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282517|gb|ABO30250.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282519|gb|ABO30251.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282521|gb|ABO30252.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282523|gb|ABO30253.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282527|gb|ABO30255.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282529|gb|ABO30256.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282531|gb|ABO30257.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282533|gb|ABO30258.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282535|gb|ABO30259.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282537|gb|ABO30260.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282539|gb|ABO30261.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282541|gb|ABO30262.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. dicoccon] gi|129282543|gb|ABO30263.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282545|gb|ABO30264.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282547|gb|ABO30265.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282549|gb|ABO30266.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282551|gb|ABO30267.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282553|gb|ABO30268.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282555|gb|ABO30269.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282557|gb|ABO30270.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282559|gb|ABO30271.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282561|gb|ABO30272.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282563|gb|ABO30273.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282565|gb|ABO30274.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282567|gb|ABO30275.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282569|gb|ABO30276.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282571|gb|ABO30277.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282573|gb|ABO30278.1| SNF2 family N-terminal domain protein [Triticum turgidum subsp. durum] gi|129282575|gb|ABO30279.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282577|gb|ABO30280.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282579|gb|ABO30281.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282581|gb|ABO30282.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282583|gb|ABO30283.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282585|gb|ABO30284.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282587|gb|ABO30285.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282589|gb|ABO30286.1| SNF2 family N-terminal domain protein [Triticum aestivum] gi|129282591|gb|ABO30287.1| SNF2 family N-terminal domain protein [Triticum aestivum] Length = 69 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 21/50 (42%) Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E R + G + + + ++T++E +LQ K + D + Sbjct: 1 VESQAQDRIHRIGQFKPIRSTRFVIKDTVEERILQLQEKKQLVFDGTVGD 50 >gi|242316276|ref|ZP_04815292.1| putative helicase SNF2 family protein [Burkholderia pseudomallei 1106b] gi|242139515|gb|EES25917.1| putative helicase SNF2 family protein [Burkholderia pseudomallei 1106b] Length = 1064 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 57/161 (35%), Gaps = 38/161 (23%) Query: 67 NAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCTIQEWN----EGKI 109 N +I+ + + + + G + ++ + + + Sbjct: 539 NDRRVILFTEYRTTHQWMHQILASHGFGGERLGLLHGGLSQEEREPIKAAFQASPQDSPV 598 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G++LQ N L+ + ++ +Q RI QR ++ V +++ Sbjct: 599 RILLAT-DAASEGIDLQNHCNRLIHLEIPYNPNVMEQRNGRIDRHGQR----EKEVLIWH 653 Query: 170 LI--------AQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + + E +L+ LR L++++ + Sbjct: 654 PVDGGGANGASVGGLGEDILRALRK--------LDSMRADM 686 >gi|119508908|ref|ZP_01628060.1| putative ATP-dependent helicase [Nodularia spumigena CCY9414] gi|119466437|gb|EAW47322.1| putative ATP-dependent helicase [Nodularia spumigena CCY9414] Length = 958 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 11/107 (10%) Query: 91 GRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G ++++ + K P+ + GLNL Y + L+ F + W L QQ Sbjct: 486 GMADVDQVKIVEQFGQEKSPVRILIATEVASEGLNLHYLSHKLIHFDIPWSLMTLQQRNG 545 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTID-----ELVLQRLRTKSTIQ 191 RI + G R + YL+ ++T++ + ++Q L K Sbjct: 546 RID-----RYGQTRQPEIRYLLTRSTLERMDEVKRIIQVLLVKDEQA 587 >gi|126452260|ref|YP_001067911.1| SNF2-related:helicase, C-terminal [Burkholderia pseudomallei 1106a] gi|126225902|gb|ABN89442.1| SNF2-related:Helicase, C-terminal [Burkholderia pseudomallei 1106a] Length = 1045 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 57/161 (35%), Gaps = 38/161 (23%) Query: 67 NAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCTIQEWN----EGKI 109 N +I+ + + + + G + ++ + + + Sbjct: 520 NDRRVILFTEYRTTHQWMHQILASHGFGGERLGLLHGGLSQEEREPIKAAFQASPQDSPV 579 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G++LQ N L+ + ++ +Q RI QR ++ V +++ Sbjct: 580 RILLAT-DAASEGIDLQNHCNRLIHLEIPYNPNVMEQRNGRIDRHGQR----EKEVLIWH 634 Query: 170 LI--------AQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + + E +L+ LR L++++ + Sbjct: 635 PVDGGGANGASVGGLGEDILRALRK--------LDSMRADM 667 >gi|254197563|ref|ZP_04903985.1| dead/deah box helicase [Burkholderia pseudomallei S13] gi|169654304|gb|EDS86997.1| dead/deah box helicase [Burkholderia pseudomallei S13] Length = 755 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 32/98 (32%), Gaps = 6/98 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 633 RREDWIAEQLDRGIDVLITNPDLVKTGLDLLDFPTIVFMQSGYNVYTLQ------QAARR 686 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G K+ V V YL +T L + K + Sbjct: 687 SWRIGQKQPVKVIYLGYADTSQMHCLTLMAKKIAVSQS 724 >gi|300174909|dbj|BAJ10682.1| hypothetical protein [Streptococcus thermophilus] Length = 349 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 4/86 (4%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L A G GLN+Q + + W + Q R+ Q + V +Y+ I Sbjct: 2 LMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQRNGRLIR----QGNMHQEVDIYHYI 57 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + + D + Q K ++ + Sbjct: 58 TKGSFDNYLWQTQENKLKYITQIMTS 83 >gi|308804449|ref|XP_003079537.1| RING finger-like protein (ISS) [Ostreococcus tauri] gi|116057992|emb|CAL54195.1| RING finger-like protein (ISS) [Ostreococcus tauri] Length = 1539 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 40/104 (38%), Gaps = 8/104 (7%) Query: 84 LQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + G+T + ++ + N+ + +L + + GL+L + + ++ Sbjct: 1022 HESITRIGQTRFEREEALKTFKNDPDVAVLLLN-RAAAEGLDL-SFVSYVFLMEPLSNMS 1079 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +Q++ R + G V V L +NT +E +L Sbjct: 1080 LEEQVVSR-----AHRMGQMDTVHVEVLAMENTAEETMLDVQAE 1118 >gi|32470929|ref|NP_863922.1| DEAH ATP-dependent helicase [Rhodopirellula baltica SH 1] gi|32443074|emb|CAD71596.1| probable DEAH ATP-dependent helicase [Rhodopirellula baltica SH 1] Length = 901 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + + ++ LL A + GLNLQ G ++ L W+ +Q + RI Sbjct: 737 EREELKHAVKKRELRLLVAT-DAACEGLNLQTLGTLIN-VDLPWNPSRLEQRLGRIKRFN 794 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q + R V + L+ +T DE V Q L + Sbjct: 795 QAR----RTVDMLNLVYHDTQDERVYQVLSRRMK 824 >gi|312139080|ref|YP_004006416.1| helicase and type iii restriction enzyme [Rhodococcus equi 103S] gi|311888419|emb|CBH47731.1| putative helicase and type III restriction enzyme [Rhodococcus equi 103S] Length = 959 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 11/118 (9%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G + + + + P+ + G+NL + L+ + + W L + Sbjct: 480 MLHGGLSDVEQQEIVDSFKLETSPIRVLVTGDVASEGVNLHAQCHHLIHYDIPWSLIRIE 539 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQN-----TIDELVLQRLRTKSTIQDLLLNAL 198 Q R+ + G K + LI + + D VL RL + L + Sbjct: 540 QRNGRVD-----RYGQKHPPVISSLILEPSDPEFSGDLRVLSRLLERENQAHGTLGDV 592 >gi|254423590|ref|ZP_05037308.1| Helicase conserved C-terminal domain protein [Synechococcus sp. PCC 7335] gi|196191079|gb|EDX86043.1| Helicase conserved C-terminal domain protein [Synechococcus sp. PCC 7335] Length = 1054 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 9/93 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNE----GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G + + + +L A + GL+LQ + L+ + + W+ Sbjct: 559 MTLYGGMDSKEREQAKAAFQAKPEISPVRILLAT-DAASEGLDLQNHCSRLIHYEIPWNP 617 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 +Q R+ QR V +Y+ +A Sbjct: 618 NRMEQRNGRVDRHGQR----ADEVSIYHFVAAG 646 >gi|156053363|ref|XP_001592608.1| hypothetical protein SS1G_06849 [Sclerotinia sclerotiorum 1980] gi|154704627|gb|EDO04366.1| hypothetical protein SS1G_06849 [Sclerotinia sclerotiorum 1980 UF-70] Length = 2003 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 7/97 (7%) Query: 92 RTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++E+ K +L G GLNL N + LWW+ Q R Sbjct: 1856 MKSNDQAHILREFETNPKFTILIIGLKVGGVGLNL-AFANRAIMVDLWWNAATESQANGR 1914 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 I + G ++ + + ++D +L+ K Sbjct: 1915 I-----FRIGQEKETNFARFMMRESVDIRLLRMQVEK 1946 >gi|71003830|ref|XP_756581.1| hypothetical protein UM00434.1 [Ustilago maydis 521] gi|46096112|gb|EAK81345.1| hypothetical protein UM00434.1 [Ustilago maydis 521] Length = 1828 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 47/152 (30%), Gaps = 15/152 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKD 97 W I L+ + + +V H+ L ++A G K Sbjct: 1479 GDWSGKISGLIVDLKERLAQDPTHKAVVFSHWPKMLTFAREALVQNGVSAVVFGGNETKQ 1538 Query: 98 PCTIQEWNEG-KIPLLFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ + + ++ + L ++ D Q + RI Sbjct: 1539 AEALRAMRDDDHVHVILVPFRASAGAAGLSLTSCDLAYLLEPALDTALEAQAVARI---- 1594 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +R + + ++TI++ V++ + Sbjct: 1595 -HRIGQRRETTIIRVKMKDTIEDAVMRIADER 1625 >gi|313897139|ref|ZP_07830684.1| helicase C-terminal domain protein [Clostridium sp. HGF2] gi|312958067|gb|EFR39690.1| helicase C-terminal domain protein [Clostridium sp. HGF2] Length = 461 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 12/127 (9%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 R T + + + G + L P+ CG G+N Q + ++F L Sbjct: 314 HKAIRESVEVKGSDTPEHKEKAMMGFASGDVKYLVTKPSICGFGMNWQN-CHDMIFCGLS 372 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 E+ + R + G K V V+ +I++ + VL ++ K T + + Sbjct: 373 DSYEQFY-----QAIRRCYRFGQKHEVNVHVIISEK--EMNVLNNIKRKQTDHER----M 421 Query: 199 KKETIHV 205 E + V Sbjct: 422 SAEMVKV 428 >gi|150863827|ref|XP_001382433.2| DNA-dependent ATPase of the nucleotide excision repair factor 4 complex [Scheffersomyces stipitis CBS 6054] gi|149385083|gb|ABN64404.2| DNA-dependent ATPase of the nucleotide excision repair factor 4 complex [Scheffersomyces stipitis CBS 6054] Length = 1343 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 6/72 (8%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L HGL + + F S Q+ IE + R + G + V V L+ Sbjct: 1127 LIMDLRLAAHGLTI-VEATHVYFMSP-----VWQRSIEAQAIKRAHRIGQTKDVHVETLV 1180 Query: 172 AQNTIDELVLQR 183 + T++E + +R Sbjct: 1181 LRGTLEEEIYKR 1192 >gi|116662342|ref|YP_829395.1| helicase domain-containing protein [Arthrobacter sp. FB24] gi|116613121|gb|ABK05814.1| helicase domain protein [Arthrobacter sp. FB24] Length = 1575 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 4/90 (4%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+I +L + G G N+Q LV W + +Q RI Q V Sbjct: 1178 SGQIAVLMGSTSKMGVGTNIQKRAVHLVDMDAPWRPSDVEQRHGRILR----QGNQNSEV 1233 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ + + D + Q L KS + ++ Sbjct: 1234 RISQVVTKESFDSFMWQGLERKSRFINQIM 1263 >gi|15227191|ref|NP_179232.1| DRD1 (DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1); ATP binding / DNA binding / helicase/ nucleic acid binding [Arabidopsis thaliana] gi|4544390|gb|AAD22300.1| hypothetical protein [Arabidopsis thaliana] gi|330251398|gb|AEC06492.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 888 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 7/102 (6%) Query: 93 TLDKDPCTIQEWNE-GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ +++ +N + F +CG G++L G + ++ + + R Sbjct: 750 SSEQREWSMETFNSSPDAKIFFGSIKACGEGISL-VGASRILILDVPLNPSVT-----RQ 803 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + R + G K+ V Y LIA ++ +E K I + Sbjct: 804 AIGRAFRPGQKKMVHAYRLIAGSSPEEEDHNTCFKKEVISKM 845 >gi|78211593|ref|YP_380372.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9605] gi|78196052|gb|ABB33817.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9605] Length = 534 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 56/190 (29%), Gaps = 26/190 (13%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPI 71 L +A + + Q+A + + V + + Sbjct: 344 RARLGEVRRDAEH-LALLTSMRQIA---AEFKLPAAQQLVESLR----------RQGEAV 389 Query: 72 IVAYHFNSDLARLQKAF-----PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 ++ F + L LQ+ + + ++ + +G+ L A + G L Sbjct: 390 VLFSGFVAPLHLLQQTLGGELLTGRQRPAERQESVDRFQQGQNDCLLATFGTGALGFTLH 449 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +V W + Q +R ++L D+LV L + Sbjct: 450 R-ARHVVLLERPWTPGDLDQAEDRCHRLGMGDGL-----TCHWLQL-GAADQLVDGLLAS 502 Query: 187 KSTIQDLLLN 196 K+ ++LL Sbjct: 503 KAERIEVLLG 512 >gi|208434933|ref|YP_002266599.1| adenine specific DNA methyltransferase [Helicobacter pylori G27] gi|208432862|gb|ACI27733.1| adenine specific DNA methyltransferase [Helicobacter pylori G27] Length = 2808 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G++ +L PA G G N+Q + W +E Q Sbjct: 2336 FIHDAKTEEQKQDLFKKLNRGEVRVLLGSPAKMGVGTNVQERLVAMHELDCPWRSDELLQ 2395 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 2396 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 2451 >gi|148241137|ref|YP_001226294.1| SNF2 family DNA/RNA helicase [Synechococcus sp. RCC307] gi|147849447|emb|CAK26941.1| Superfamily II DNA/RNA helicases, SNF2 family [Synechococcus sp. RCC307] Length = 532 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 63/195 (32%), Gaps = 28/195 (14%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 +++ L + E + QL++ H + Sbjct: 338 DAYRKRAAAGLVRSDAER---LALLTALRQLSS-------------FHKLAALQQLLDQL 381 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQG-----RTLDKDPCTIQEWNEGKIPLLFAHPASC 119 + + P++V F L +L + + +Q + +G LL A Sbjct: 382 QVSGDPVVVFSGFRGPLLQLHRLRGGELLTGLVDPAERLERLQRFQQGDSNLLLATYGVA 441 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G GL LQ + ++ W + + R + G +R V ++L D L Sbjct: 442 GLGLGLQR-ASQVILLERPWTPGDAE-----QAEDRCHRFGTRRTVECHWLQL-GGADAL 494 Query: 180 VLQRLRTKSTIQDLL 194 V + +KS +++ Sbjct: 495 VDGLILSKSERIEVV 509 >gi|219849463|ref|YP_002463896.1| helicase domain-containing protein [Chloroflexus aggregans DSM 9485] gi|219543722|gb|ACL25460.1| helicase domain protein [Chloroflexus aggregans DSM 9485] Length = 957 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 5/122 (4%) Query: 77 FNSDLARLQKAFPQGRT-LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F L+ + GR ++ I + +L A G+NL N + + Sbjct: 505 FRHHLSGVHVTCVTGRMGEEERRAVIAAAPVDQPRVLVAT-DCISEGINLHERYNAAIHY 563 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 L W+ +Q R+ Q V V Y N +D +V+ L K+ L Sbjct: 564 DLPWNPNRLEQREGRVDRYGQTAPTV---VTVRYYGLNNEVDTVVIDVLLRKAREIRRAL 620 Query: 196 NA 197 A Sbjct: 621 GA 622 >gi|106364397|dbj|BAE95223.1| ATP-dependent RNA helicase [unclutured Candidatus Nitrosocaldus sp.] Length = 589 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 10/111 (9%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G ++ ++ + G+ +L A + GL++ N+++F+ Q Sbjct: 446 YGLRQEEQVEVVERFRAGEYSILVAT-SVGEEGLDI-AECNLVIFYDNVPSAIRFVQRKG 503 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R G V L+A++TIDE R K +++ + + Sbjct: 504 RTGRR--------MPGKVIVLVAKDTIDEAYHWISRKKVRQVRSIVSIVNR 546 >gi|317180791|dbj|BAJ58577.1| hypothetical protein HPF32_0995 [Helicobacter pylori F32] Length = 1183 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 3/116 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T ++ ++ N G++ +L PA G G N+Q + W +E Q Sbjct: 667 FIHDAKTEEQKQDLFKKLNRGEVMVLLGSPAKMGVGTNVQERLVAMHELDCPWRPDELLQ 726 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 M R G + + +Y + T D + Q + TKS + NA K Sbjct: 727 MEGRGIRQGNILHQNDPENFRMKIYRYATEKTYDSRMWQIIETKSKGIEQFRNAHK 782 >gi|254884184|ref|ZP_05256894.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|255013702|ref|ZP_05285828.1| putative DNA methylase [Bacteroides sp. 2_1_7] gi|254836977|gb|EET17286.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 1659 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T +E N GK+ +LF G G+N Q + + W + + Sbjct: 1286 QFIQCATTERTRKKLFEEMNNGKVRVLFGSTTMLGTGVNAQQRAVAVHHLEIPWRPADME 1345 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V V + T+D L+ K + + Sbjct: 1346 QRNGRAIRKGNTVKLWGGNVVDVVIYGTEKTLDAYKFNLLKNKQMFINQI 1395 >gi|323449101|gb|EGB04992.1| hypothetical protein AURANDRAFT_17564 [Aureococcus anophagefferens] Length = 76 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 7/83 (8%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 + + +L A+ G GLN+ N +V + E R + G R V Sbjct: 1 DPETSVLLLTLATAGVGLNITN-ANKVVILEPFRFGSN-----EAQAAMRVHRIGQSRDV 54 Query: 166 FVYYLIAQNTIDELVLQRLRTKS 188 + + T+DE +L+ LR K Sbjct: 55 EIIKFFTRGTMDERLLK-LRHKR 76 >gi|302554146|ref|ZP_07306488.1| helicase domain-containing protein [Streptomyces viridochromogenes DSM 40736] gi|302471764|gb|EFL34857.1| helicase domain-containing protein [Streptomyces viridochromogenes DSM 40736] Length = 1072 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 +D + + + + + ++ + G++LQ ++LV + + Sbjct: 482 ADEGYSARMYSGRQRSADRDEARSAFMRSEYQIIV-TTDAGNEGIDLQA-AHVLVNYDIP 539 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID-ELVLQRLRT 186 W L +Q + RI + G R VF+Y L+A +T + E + L Sbjct: 540 WSLVRLEQRMGRI-----HRVGQTRDVFLYNLVAVDTREGETLHTLLER 583 >gi|27375975|ref|NP_767504.1| hypothetical protein blr0864 [Bradyrhizobium japonicum USDA 110] gi|27349114|dbj|BAC46129.1| blr0864 [Bradyrhizobium japonicum USDA 110] Length = 1073 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 40/118 (33%), Gaps = 27/118 (22%) Query: 95 DKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 DK + +N + +L + G+NLQ + L+ F L W+ +Q R Sbjct: 563 DKREAVKRAFNTDPAIEPVRILLCT-DAAREGINLQTYCSDLIHFDLPWNPSRLEQRNGR 621 Query: 151 IGVT---------RQRQAGFKRAVFVYYLIAQNT-------------IDELVLQRLRT 186 I R + + A V + + T I+E V +RL Sbjct: 622 IDRKLQPAKLIICRYFKYEQREADIVLDALVRKTESIRNQLGSVGQLIEERVTKRLAE 679 >gi|257440757|ref|ZP_05616512.1| ATP-dependent helicase [Faecalibacterium prausnitzii A2-165] gi|257196731|gb|EEU95015.1| ATP-dependent helicase [Faecalibacterium prausnitzii A2-165] Length = 961 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 11/107 (10%) Query: 91 GRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + + ++++ E +L A GLNL Y + L+ F + W L QQ Sbjct: 492 GMSDAEQQRIVEDFGRTESSTRILVAS-DVASEGLNLHYLSHRLIHFDIPWSLMVFQQRN 550 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNT----IDELVLQRLRTKSTIQ 191 RI Q KR Y LI N D +++ L K Sbjct: 551 GRIDRYGQ----QKRPDIRYLLIESNNKQIKGDMRIIEILIQKEEQA 593 >gi|311104291|ref|YP_003977144.1| helicase [Achromobacter xylosoxidans A8] gi|310758980|gb|ADP14429.1| helicase conserved C-terminal domain protein [Achromobacter xylosoxidans A8] Length = 759 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKLPVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|126667783|ref|ZP_01738750.1| hypothetical protein MELB17_09048 [Marinobacter sp. ELB17] gi|126627731|gb|EAZ98361.1| hypothetical protein MELB17_09048 [Marinobacter sp. ELB17] Length = 2567 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 4/110 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + G++ L G G N+Q + W + +Q Sbjct: 2115 FIHDAKTDADKEKLFAQVRSGEVRFLLGSTQKMGVGTNVQERLIAIHQLDPPWKPSDIEQ 2174 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + RQ F Y + +++ D + + L K + + Sbjct: 2175 RLGR--MDRQGNMFETAHNFTY--VTEDSFDLFMWETLNRKLKMIRQAMQ 2220 >gi|281355130|ref|ZP_06241624.1| type III restriction protein res subunit [Victivallis vadensis ATCC BAA-548] gi|281318010|gb|EFB02030.1| type III restriction protein res subunit [Victivallis vadensis ATCC BAA-548] Length = 1689 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 7/110 (6%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T + + N G++ ++ G G+N+Q + + + +Q RI Sbjct: 1282 NTDKQKADLFERVNSGEVRIIIGSTMKLGTGVNIQERLAVEHDLDCPFRPADVEQRKGRI 1341 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 Q V + + T+D + L K + +A+K Sbjct: 1342 VR----QGNILEEVEIIRYGIEQTLDAGMYAILERKQKFIN---DAMKGR 1384 >gi|302802608|ref|XP_002983058.1| hypothetical protein SELMODRAFT_155610 [Selaginella moellendorffii] gi|300149211|gb|EFJ15867.1| hypothetical protein SELMODRAFT_155610 [Selaginella moellendorffii] Length = 1114 Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAA------PIIVAYHFNSDLARLQKAFPQG- 91 + D W+ K+ L + IV F ++ ++ +G Sbjct: 926 YIQEDWHSEWQATSSSKVSYLVERLRGLQQENGKLPEKAIVFSQFLEHISAIEMQLTKGG 985 Query: 92 ---------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 +++ + E ++ +S GL+L + ++ + +W Sbjct: 986 IEHAGMYSPMPAASKMKSLRTFQENPKCVVLLMDSSSALGLDLSFVTHVFLMEPIWD--- 1042 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + IE V+R + G R V V L TI+E +L L+ Sbjct: 1043 ---RSIEEQVVSRAHRMGATRPVLVETLAMAGTIEEQMLGFLQR 1083 >gi|302665555|ref|XP_003024387.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] gi|291188439|gb|EFE43776.1| SNF2 family helicase, putative [Trichophyton verrucosum HKI 0517] Length = 2047 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 58/174 (33%), Gaps = 18/174 (10%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP----IIVAYHFNSDLA-----RLQKA 87 ++ + + K A+ ++E P +++ F + + Sbjct: 1835 CHPEWHTQTDKLAKYGSSKFTAVIELLEDTEKVPADDQVLLFIQFPELMDAASKALEAAS 1894 Query: 88 FPQGRTLDKDP---CTIQEWNEGK----IPLLFAHP-ASCGHGLNLQYGGNILVFFSLWW 139 P D I E+ GK +L + GLNLQ +I+ F L Sbjct: 1895 IPHTVIQPGDRTPTSKISEFQNGKESVKSKVLILNLGDVTASGLNLQNANHIIFFGPLVA 1954 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + + R R+ G + V +Y+++A ++ + + R K + Sbjct: 1955 RSQYDYDSGMAQAIGRSRRYGQLKHVHIYHVLALRRVEVNIFE-QRRKQYLAKR 2007 >gi|302822214|ref|XP_002992766.1| hypothetical protein SELMODRAFT_430934 [Selaginella moellendorffii] gi|300139411|gb|EFJ06152.1| hypothetical protein SELMODRAFT_430934 [Selaginella moellendorffii] Length = 208 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 23/60 (38%) Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I + + + G + V + I +++++E + Q K + L + + + Sbjct: 141 SNIPAVAPSSESSIGQTKNVSIKRFIVKDSVEERMQQVQARKQGLIARALTDEEVRSARI 200 >gi|240169377|ref|ZP_04748036.1| helicase domain-containing protein [Mycobacterium kansasii ATCC 12478] Length = 955 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 7/102 (6%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + P L G+NLQ G +V + L W+ H+Q RI Sbjct: 526 PEEREERVDALTAHDGPRLLIATDCLSEGINLQEGFTAVVHYDLAWNPTRHEQREGRID- 584 Query: 154 TRQRQAGFKRAV--FVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G V V Y N ID +VL+ L + Sbjct: 585 ----RFGQGAPVVRTVTYFGEDNGIDGIVLEVLIRRHKNIQR 622 >gi|315187180|gb|EFU20937.1| helicase domain protein [Spirochaeta thermophila DSM 6578] Length = 87 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 +++ + + + +Q I R+ + G V + +++++ VL+ L K + Sbjct: 1 MIINYDIPCNPMRLEQRIGRVD-----RIGQTHTVRAINFVFEDSVEHRVLEVLEEKLAV 55 Query: 191 Q 191 Sbjct: 56 I 56 >gi|242216384|ref|XP_002474000.1| predicted protein [Postia placenta Mad-698-R] gi|220726865|gb|EED80801.1| predicted protein [Postia placenta Mad-698-R] Length = 349 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 10/125 (8%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + + + + + + +L NIL+ Sbjct: 150 QMYGIEYETLTGTMSGRQRAEALHNFMQSDAKGVRVLVLSNVGAVGFNI--ACANILIII 207 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 W ++ Q+I R+ R + V VY LIA+NT D + KS + + + Sbjct: 208 DTLWSAQDDSQLIGRLWRQR-----QLKLVHVYRLIARNTSDVFLNNISFDKSIMHNAFM 262 Query: 196 NALKK 200 + + Sbjct: 263 GSSRA 267 >gi|159469426|ref|XP_001692864.1| SNF2 family chromodomain-helicase [Chlamydomonas reinhardtii] gi|158277666|gb|EDP03433.1| SNF2 family chromodomain-helicase [Chlamydomonas reinhardtii] Length = 3365 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 47/181 (25%), Gaps = 38/181 (20%) Query: 22 AFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 A N + QLA ++ K + Y + Sbjct: 1289 ASNKLVVLDRMLRQLA-----ARGQRVIVLSQSAKTLDVLE------------QYASRAF 1331 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--------------LLFAHPASCGHGLNLQ 126 TI +N L+ S G G NL Sbjct: 1332 GPGAAVRIDSSTPSAARHATIAAFNAAVSRADAANGPAADAAPFLVLMTTRSFGLGTNLP 1391 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++F S W ++ + R + G + VY L A+ T++E +L Sbjct: 1392 AVSAAVIFDSDWH------PRLDMQALRRAYRLGESGRLAVYRLYARGTVEERLLTLAER 1445 Query: 187 K 187 + Sbjct: 1446 R 1446 >gi|159898481|ref|YP_001544728.1| helicase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159891520|gb|ABX04600.1| helicase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 968 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 8/107 (7%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + ++ I E + LL A G+NLQ N ++ + L W+ +Q R+ Sbjct: 536 HSEEERESLIAELSASPRRLLVAT-DCLSEGINLQEAFNAVIHYDLPWNPNRLEQREGRV 594 Query: 152 GVTRQRQAGFKRAVFVYYLI--AQNTIDELVLQRLRTKSTIQDLLLN 196 + G V L+ N IDE V++ L K+ L Sbjct: 595 D-----RYGQPAPVVRMALVRGEDNPIDEAVMRVLLRKAVTIHRTLG 636 >gi|38637975|ref|NP_942949.1| helicase superfamily protein II [Ralstonia eutropha H16] gi|32527313|gb|AAP86063.1| putative helicase superfamily II [Ralstonia eutropha H16] Length = 1037 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 59/208 (28%), Gaps = 24/208 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y ++ ++G++ ++ AN + + K +A+ Sbjct: 797 QWYRDVRK-----VEGKSNNLIAILARIRAVHFAANYPQHGVDGVGALGQLTSKQRAVIE 851 Query: 62 -------------IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + + ++A + + + + G Sbjct: 852 RLEAIAGEGKQAILFAENPGVINLIASQLKAKGVETVPFHGGIPIAKRVADKDKRFVGGT 911 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 L AS G NL + ++F+ W IE + R + K + V Sbjct: 912 ATGLLCTKASGRAGYNLPN-ADYVLFYDRSWTW-----RIEYQAMRRALRWNRKGQLKVV 965 Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Y ++D Q + K + L+ Sbjct: 966 YFHLPGSLDIYQDQMVAHKRDAMEAGLD 993 >gi|323507972|emb|CBQ67843.1| related to SNF2 family helicase/ATPase [Sporisorium reilianum] Length = 1877 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 47/152 (30%), Gaps = 15/152 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA--------FPQGRTLDKD 97 W I L+ + + +V H+ L ++ A G + Sbjct: 1527 GDWSGKISGLIVDLKARLSQDATHKAVVFSHWPKMLTFVRDALVQNDVTAVVFGGNEARQ 1586 Query: 98 PCTIQE-WNEGKIPLLFAHPASCGHGLNLQ-YGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ ++ + ++ + L ++ D E V R Sbjct: 1587 AEALRAIRDDDHVHVILVPFRASAGAAGLTLTSCDLAYLMEPALDAAL-----EAQAVGR 1641 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +R + + ++TI++ V++ + Sbjct: 1642 IHRIGQRRETTIIRVKMKDTIEDAVMRIADER 1673 >gi|240276209|gb|EER39721.1| SNF2 family helicase [Ajellomyces capsulatus H143] Length = 1198 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 46/140 (32%), Gaps = 10/140 (7%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE-GKIPLLFAHPAS 118 ++II L + + + +NE + +L Sbjct: 933 KIIIFYEGNNTGFYIAEGLELLGVEFRIYANTLKTKTRSEYLSLFNETETVRVLLMDLRQ 992 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 HGL++ + + + WD E + R + + V+V L+ ++ ++ Sbjct: 993 AAHGLHI-ACASRVFIVNPIWDP-----NFESQAIKRAHRISQNKPVYVETLVLKD-VEC 1045 Query: 179 LVLQRLRTKSTIQDLLLNAL 198 + R K + D ++ + Sbjct: 1046 RIATR--EKDPLDDRTMSDI 1063 >gi|260101489|ref|ZP_05751726.1| Snf2 family protein [Lactobacillus helveticus DSM 20075] gi|260084703|gb|EEW68823.1| Snf2 family protein [Lactobacillus helveticus DSM 20075] Length = 411 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 21/137 (15%) Query: 2 KQYHKFQRELYCDL---QGENIEAFN--SASKTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y ++L +L + + ++ K ++ E H + K+ Sbjct: 277 ELYKLQTQKLIAELSCQGDAEFKRAHFEIFAQITKLREICCDPHLLYENYH---GNSGKL 333 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEW 104 A +I+ N I++ F S L +Q + + I ++ Sbjct: 334 IATIDLIKANLENGHKILLFSQFTSMLEIIQNKLRKLKVPIFVITGATAKKERQDKIHQF 393 Query: 105 NEGKIP-LLFAHPASCG 120 N P + + G Sbjct: 394 NSLDKPAIFLISLKAGG 410 >gi|225563147|gb|EEH11426.1| DNA repair protein rad8 [Ajellomyces capsulatus G186AR] Length = 2156 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 101 IQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTR 155 I E+ + +L H N ++FF + ++ + R Sbjct: 2026 IAEFQTRAEKVESKVLILHLGDVSASGLNLQNANHVIFFHPLFTKSQYDYNSGMAQAIGR 2085 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQ 182 R+ G ++ V +Y+ +A TI+ + + Sbjct: 2086 SRRYGQQKHVHIYHFLALKTIEVNIFE 2112 >gi|238588204|ref|XP_002391661.1| hypothetical protein MPER_08877 [Moniliophthora perniciosa FA553] gi|215456617|gb|EEB92591.1| hypothetical protein MPER_08877 [Moniliophthora perniciosa FA553] Length = 249 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 43/151 (28%), Gaps = 38/151 (25%) Query: 50 EVHDEKIKALEVII--EKANAAPIIVAYHFNS----------DLARLQKAFPQGRTLDKD 97 + K++AL ++ + ++V F + +D Sbjct: 31 FLDSGKVQALLKLLKIYEDEGRKVLVFSQFTQVLDILELILKERNIKYLMLTGSTPVDVR 90 Query: 98 PCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + E+ + I + G G+NL + Sbjct: 91 QSLVDEFTEDQSISAFLLSTKAGGMGINLT-------------------------AASVV 125 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 G KR V V LI + TI+E + + K Sbjct: 126 IMIGQKRDVDVVKLITRXTIEEDITELGEMK 156 >gi|300865065|ref|ZP_07109891.1| Helicase domain protein [Oscillatoria sp. PCC 6506] gi|300336929|emb|CBN55041.1| Helicase domain protein [Oscillatoria sp. PCC 6506] Length = 1050 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 13/136 (9%) Query: 47 HWKEVHDEKIKALEVIIEKANAAPIIVAYHF----NSDLARLQKAFPQGRTLDKDPCTIQ 102 H + + K VII A Y+ G + Sbjct: 512 HTQIKPNGKWSKERVIIFTEYRATQKWLYNLLAAERLIEGDRLMTLYGGMVSEDREKVKA 571 Query: 103 EWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + +L A + GL+LQ + L+ + + W+ +Q RI Q+ Sbjct: 572 AFQTDPDISPVRILLAT-DAASEGLDLQNYCSKLIHYEIPWNPNRMEQRNGRIDRHGQK- 629 Query: 159 AGFKRAVFVYYLIAQN 174 + V VY+ + ++ Sbjct: 630 ---AQEVLVYHFVGKD 642 >gi|324502242|gb|ADY40988.1| DNA repair and recombination protein RAD54B [Ascaris suum] Length = 415 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 47/176 (26%), Gaps = 44/176 (25%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKE-----------------------------VHDEKI 56 + +L N + K V K+ Sbjct: 228 LAIIDMLRKLCNHPSILYQSLTSKHGAFNSCESTLNATVLRAFPSSFEPNCSTIVDSGKL 287 Query: 57 KALEVIIE--KANAAPIIVAYHFNSDLARLQKAF----------PQGRTLDKDPCTIQEW 104 ++ + ++V +F L L + + + E+ Sbjct: 288 SVFVKMMVSLRETNEKVVVVSNFTKTLDMLSEVCKGIFCTVTRLDGSVVPHRRMQLVDEF 347 Query: 105 NEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 N +P + + G GLNL G + LV F W+ Q + RI Q+ Sbjct: 348 NTSSLPNHVFLLSTKAVGVGLNL-IGASRLVLFDSDWNPAFDVQAMARIWRDGQKN 402 >gi|328949537|ref|YP_004366873.1| SNF2-related protein [Treponema succinifaciens DSM 2489] gi|328449861|gb|AEB15576.1| SNF2-related protein [Treponema succinifaciens DSM 2489] Length = 2135 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 5/104 (4%) Query: 92 RTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +K E+N+ K PL + + G++L ++ SL W+ E Q R Sbjct: 1431 NTPEKKEKITAEFNDPKNPLKIIIGGKNTSEGIDLNGNSFVMYNCSLGWNPSETIQAEGR 1490 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 I Q V + Y + ++ID L+ Q+ K + + L Sbjct: 1491 IWRQGNMQG----HVHIVYPVMTDSIDSLLYQKHDEKRSRINDL 1530 >gi|167519020|ref|XP_001743850.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777812|gb|EDQ91428.1| predicted protein [Monosiga brevicollis MX1] Length = 1673 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 16/183 (8%) Query: 3 QYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +Y + +R+L L + A ++ANG V K + E+ + Sbjct: 1427 EYSQLLMRRDLEDRLGQAEGSDLSGA-------RVANGGVLGAGVPEAKRLMREQHMPYK 1479 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+ A + +F KA R+ KD I+ + + Sbjct: 1480 AIVYSAQRN-TLDNTYFRLRSFFGDKACAMYRSQQKDVHEIRRFRQDDQCAFLCLAQEGA 1538 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GL+L + +I + + +E + R + G + V V L+ T+D+L+ Sbjct: 1539 VGLDLHFVTHIFLLEEP------VDKSLEAQVIARAWRIGCNQVVHVQKLVMAETVDDLL 1592 Query: 181 LQR 183 + Sbjct: 1593 WRI 1595 >gi|115812720|ref|XP_782461.2| PREDICTED: similar to MGC81081 protein [Strongylocentrotus purpuratus] gi|115976089|ref|XP_001191838.1| PREDICTED: similar to MGC81081 protein [Strongylocentrotus purpuratus] Length = 361 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 43/152 (28%), Gaps = 21/152 (13%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 +RE+Y + + + +Q + KIK + +E+ + Sbjct: 181 EREIYDQVVQQYRSTPKTLIILQHLMQCCGHLSLVQPSYQPSFL-STKIKFVIDQLEEIH 239 Query: 68 A-------APIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWNEGK-- 108 ++ F L + + K + ++N Sbjct: 240 DEGPADSPMKSVIVSQFTEMLDVVASHLSWAGFEYWSIRRAIPPKKRSEAMDDFNNNPRG 299 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 ++ + GLNL GGN L F + Sbjct: 300 REVMLVSLKAGRVGLNL-IGGNHLFFLDMHCS 330 >gi|3599409|gb|AAC62714.1| ATP-dependent RNA helicase [Cenarchaeum symbiosum] Length = 502 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 10/110 (9%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G K T+ ++ +G +L GL++ N+++F+ + Q R Sbjct: 383 GLKQRKQVETVAKFRDGGYDVLV-STRVGEEGLDI-SEVNLVIFYDNVPSSIRYVQRRGR 440 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G + L+A+ TIDE R K + + + + Sbjct: 441 TGRKDAGRL--------IVLMAKGTIDEAYYWIGRRKMSAAKGMGERMNR 482 >gi|77407164|ref|ZP_00784151.1| SNF2 family protein [Streptococcus agalactiae H36B] gi|77174227|gb|EAO77109.1| SNF2 family protein [Streptococcus agalactiae H36B] Length = 769 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 4/88 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T +K ++ N G++ +L A G GLN+Q + + W + Q Sbjct: 684 FVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSRMKAVHHLDVPWRPSDIVQ 743 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQN 174 R+ Q + V +Y+ I + Sbjct: 744 RNGRLIR----QGNMHQEVDIYHYITKG 767 >gi|325266725|ref|ZP_08133401.1| type III restriction enzyme [Kingella denitrificans ATCC 33394] gi|324981834|gb|EGC17470.1| type III restriction enzyme [Kingella denitrificans ATCC 33394] Length = 432 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 14/73 (19%) Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI--------- 190 + +Q I R+ + G K V + ++T++ V Q L K + Sbjct: 52 NPMRIEQRIGRVD-----RIGQKHVVRAINFVLEDTVEHRVRQVLEAKLEVIAQEFGVDK 106 Query: 191 QDLLLNALKKETI 203 ++++++ + I Sbjct: 107 AADVMDSVEADPI 119 >gi|303241343|ref|ZP_07327847.1| helicase domain protein [Acetivibrio cellulolyticus CD2] gi|302591076|gb|EFL60820.1| helicase domain protein [Acetivibrio cellulolyticus CD2] Length = 939 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 5/106 (4%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + + ++++ + P+ + G+NL Y + L+ F + W L QQ Sbjct: 476 YGGMSDSEQQKVVEDFGRVEAPVRILVASDVASQGINLHYLSHRLIHFDIPWSLMVFQQR 535 Query: 148 IERIGVTRQRQAGFKRAVFV--YYLIAQNTIDELVLQRLRTKSTIQ 191 RI Q + R + + + D V++ L K Sbjct: 536 NGRIDRYGQHEKPDIRYMTINSKNYKVKG--DMRVIEILVKKEEQA 579 >gi|86605043|ref|YP_473806.1| helicase [Synechococcus sp. JA-3-3Ab] gi|86553585|gb|ABC98543.1| putative helicase [Synechococcus sp. JA-3-3Ab] Length = 964 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 13/137 (9%) Query: 68 AAPIIVAYHFNSDLARLQ-------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 + + +D R ++ I E + +L A Sbjct: 489 WCRYVATAEYLADHLRQHLGSATQVACVTGRMGDEEREAKIAEMAVDQPRVLVAT-DCLS 547 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-IDEL 179 G+NLQ ++ + L W+ +Q R+ QR V V ++ +D + Sbjct: 548 EGINLQEKLTAVIHYDLPWNPNRLEQREGRVDRYGQRAPR----VKVIRFFGRDNPVDGV 603 Query: 180 VLQRLRTKSTIQDLLLN 196 VL+ L K L Sbjct: 604 VLKVLLNKVREIRRTLG 620 >gi|254561064|ref|YP_003068159.1| DNA adenine methyltransferase; methylase and helicase domains [Methylobacterium extorquens DM4] gi|254268342|emb|CAX24284.1| putative DNA adenine methyltransferase; putative methylase and helicase domains [Methylobacterium extorquens DM4] Length = 1698 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 38/111 (34%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + ++N GK+ +L + G G+N+Q L + W + +Q Sbjct: 1339 YMQDHKKSEAKQRLFNDFNAGKVRILLGSSETMGTGVNVQLRLKALHHLDVPWLPSQIEQ 1398 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + ++ ++D + Q K+ L+ Sbjct: 1399 REGRIVR----QGNQHDEIDIFAYATLGSLDATMWQNNERKARFIAAALSG 1445 >gi|296813227|ref|XP_002846951.1| DNA repair protein rad8 [Arthroderma otae CBS 113480] gi|238842207|gb|EEQ31869.1| DNA repair protein rad8 [Arthroderma otae CBS 113480] Length = 1955 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 18/174 (10%) Query: 37 NGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAP----IIVAYHFNSDLA-----RLQKA 87 Y +++ + K A+ +++ P +++ F + Sbjct: 1744 CHFDYNAQDRELAKYGSSKFTAVINLLQDTKKIPGDDQVLLFIQFPELMDAAATALQLAN 1803 Query: 88 FPQGRTLDKDPC---TIQEWNEGK----IPLLFAHP-ASCGHGLNLQYGGNILVFFSLWW 139 P D I E+ GK +L + GLNLQ +I+ F L Sbjct: 1804 IPHIVVQPGDRTPGGKISEFQNGKETVKSKVLILNLGDVTASGLNLQNANHIIFFGPLVA 1863 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + + R R+ G + V +Y+++A T++ + + R + + Sbjct: 1864 RSQYDYDSGMAQAIGRSRRYGQLKHVHIYHVLALRTVEVNIFE-QRRRQYLAKR 1916 >gi|270001791|gb|EEZ98238.1| hypothetical protein TcasGA2_TC000677 [Tribolium castaneum] Length = 1345 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------PC 99 ++ + ++ + + + I++ + L+ +++A + + Sbjct: 1168 GNYSTKVESIVRLILKLRLEDEDVKILLFSTWIPVLSYIREALTKNSVTSELITSGNLEK 1227 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+++ + I +L G GLNL ++ + E + R Sbjct: 1228 QIEKFKDADQNITVLLLPINLGGKGLNL-IEATHVILTEPLLNPG-----EELQAIGRVH 1281 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQR 183 + G R V+ ++TI+E + + Sbjct: 1282 RIGQTRPTVVHKFFIKHTIEESIQKA 1307 >gi|256819717|ref|YP_003140996.1| DNA methylase N-4/N-6 domain-containing protein [Capnocytophaga ochracea DSM 7271] gi|256581300|gb|ACU92435.1| DNA methylase N-4/N-6 domain protein [Capnocytophaga ochracea DSM 7271] Length = 753 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 8/97 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G+ +L G+N Q + +F SL + E V R + G + Sbjct: 336 FANGEFRVLVTKKKIAQFGMNFQN-CHNQIFASLDFSFEGTY-----QAVRRSYRFGQTK 389 Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V +Y I +T++ V Q K + + + K Sbjct: 390 EVNIY-FITTDTME-NVKQTRERKEQQFKEMQDQMNK 424 >gi|302764302|ref|XP_002965572.1| hypothetical protein SELMODRAFT_143427 [Selaginella moellendorffii] gi|300166386|gb|EFJ32992.1| hypothetical protein SELMODRAFT_143427 [Selaginella moellendorffii] Length = 1112 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 22/164 (13%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAA------PIIVAYHFNSDLARLQKAFPQG- 91 + D W+ K+ L + IV F ++ ++ +G Sbjct: 926 YIQEDWHSEWQATSSSKVSYLVERLRGLQQENGKLPEKAIVFSQFLEHISAIEMQLTKGG 985 Query: 92 ---------RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 +++ + E ++ +S GL+L + ++ + +W Sbjct: 986 IEHAGMYSPMPAASKMKSLRTFQENPKCVVLLMDSSSALGLDLSFVTHVFLMEPIWD--- 1042 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + IE V+R + G R V V L TI+E +L L+ Sbjct: 1043 ---RSIEEQVVSRAHRMGATRPVLVETLAMAGTIEEQMLGFLQR 1083 >gi|91202107|emb|CAJ75167.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 918 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 5/109 (4%) Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + G K I++ + L + GLNLQ G ++ L W+ +Q Sbjct: 744 YENGIYHRKSKEDIKKMVRTRQIKLLFGTDAASEGLNLQTLGTLIN-LDLPWNPTRLEQR 802 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 RI Q + V++Y + ++++++ V + L + L Sbjct: 803 KGRIQRIGQERD----EVWIYNMRYKDSVEDKVHRLLSNRLKNIQDLFG 847 >gi|257093732|ref|YP_003167373.1| helicase domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046256|gb|ACV35444.1| helicase domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 946 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 12/128 (9%) Query: 69 APIIVAYHFNSDLARLQKAFP------QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I H+ +D R + + E + +L A G Sbjct: 487 CRYIATAHYVADALRKAHKSHLVQAITGEFAASEREAAVDAMGEAEKRILVAT-DCLSEG 545 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-IDELVL 181 +NLQ +V + L W+ H+Q R+ Q+ R V L ++ +D VL Sbjct: 546 VNLQNLFTAVVHYDLSWNPTRHEQREGRVDRFGQK----AREVRTTMLYGRDNPVDGAVL 601 Query: 182 QRLRTKST 189 + K+ Sbjct: 602 HVILRKAE 609 >gi|269957110|ref|YP_003326899.1| helicase domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269305791|gb|ACZ31341.1| helicase domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 1095 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 15/114 (13%) Query: 95 DKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ T +N I +L A A+ G++LQ + LV F + ++ +Q I R Sbjct: 605 EERELTRARFNADPAKESIRVLVATDAAG-EGIDLQAFCHRLVNFDVPFNPSRLEQRIGR 663 Query: 151 IGVTRQRQAGFKRAVFVYYLI---AQNTI--DELVLQRLRTKSTIQDLLLNALK 199 I + G + A V+ + T D ++R+ K L ++ Sbjct: 664 ID-----RYGQQHAPEVFQFLPDATSGTFAGDMDFMRRIAEKVANVADDLGSVN 712 >gi|254572662|ref|XP_002493440.1| Putative helicase [Pichia pastoris GS115] gi|238033239|emb|CAY71261.1| Putative helicase [Pichia pastoris GS115] gi|328354735|emb|CCA41132.1| Uncharacterized ATP-dependent helicase YLR247C [Pichia pastoris CBS 7435] Length = 1548 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 59/186 (31%), Gaps = 12/186 (6%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y E ++Q I+ + + Q ++ + + V + L + Sbjct: 1310 IYKPMNDETLQEIQDIPIQKMYGSKVDLIVKQA---LWLKNKISNVQIVVFSQWLELLEV 1366 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + A + + L + + GR +K ++ I + + G Sbjct: 1367 LAIALKQNGLKCIGAKNSLKLEKGS---GRNKEKLTDVELFKSDPSITCFLLNARAQAAG 1423 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 L L + + + Q I RI + G + ++ ++T++E VL+ Sbjct: 1424 LTLVN-ASHVFLCEPLVNTALELQAISRI-----HRIGQQHKTTIWMFTIKDTVEESVLR 1477 Query: 183 RLRTKS 188 K Sbjct: 1478 LSTRKR 1483 >gi|168244020|ref|ZP_02668952.1| helicase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194451781|ref|YP_002048512.1| helicase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194410085|gb|ACF70304.1| helicase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205337051|gb|EDZ23815.1| helicase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 952 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 11/101 (10%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + + + PL L G+NL + + ++ F + W L QQ RI Sbjct: 491 ETVEAFGKSQSPLRLLICSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRID----- 545 Query: 158 QAGFKRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDL 193 + G K + YL+ + + D VL+ L K Sbjct: 546 RYGQKHQPQIRYLLTEASEPQINGDMRVLEVLINKDEQAQK 586 >gi|302852672|ref|XP_002957855.1| hypothetical protein VOLCADRAFT_48760 [Volvox carteri f. nagariensis] gi|300256834|gb|EFJ41092.1| hypothetical protein VOLCADRAFT_48760 [Volvox carteri f. nagariensis] Length = 52 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 5/57 (8%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 N + D Q V R + G R V V L+ T++E+V++ L+ Sbjct: 1 ANHVFLLEPSLDPAIEQ-----QAVARVHRIGQTREVTVTRLLVDGTVEEVVMRMLK 52 >gi|303285868|ref|XP_003062224.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226456635|gb|EEH53936.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 625 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/185 (7%), Positives = 48/185 (25%), Gaps = 41/185 (22%) Query: 2 KQYHKF---QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------ 52 + Y++ ++ ++ + ++ ++ N D Sbjct: 442 RAYYRMIYEKQVHVLMEGNKSKNVPQLRNLCMELRKVCNHPFLCDGAAAKAAADAAAAGV 501 Query: 53 ------------------DEKIKALEVIIE--KANAAPIIVAYHFN----------SDLA 82 K+ + ++ K+ +++ F + Sbjct: 502 APPTPPAPPTSLDLLTGASGKMVLVAKLLAKLKSEGKKVLIFSQFTIVLDILEDYLGMMK 561 Query: 83 RLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + + I +N +G+ + + G G+ L + + + W+ Sbjct: 562 YEYERLDGSTSQADRQAGIDRFNQDGQGFVYLLSTRAGGMGITLTA-ADTAIIYDSDWNP 620 Query: 142 EEHQQ 146 + Q Sbjct: 621 QNDLQ 625 >gi|298383565|ref|ZP_06993126.1| DNA methylase [Bacteroides sp. 1_1_14] gi|298263169|gb|EFI06032.1| DNA methylase [Bacteroides sp. 1_1_14] Length = 1657 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T ++ N GK+ +LF G G+N Q + + W + + Sbjct: 1278 QFIQCATTERARKRLFEDMNNGKVRVLFGSTTMLGTGVNAQQRAVAVHHLEIPWRPADME 1337 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V V + T+D L+ K + + Sbjct: 1338 QRNGRAVRKGNTVKLWGGNVVDVVIYGTEKTLDAYKFNLLKNKQMFINQI 1387 >gi|258513251|ref|YP_003189507.1| DNA methylase/helicase SNF2 [Acetobacter pasteurianus IFO 3283-01] gi|256635154|dbj|BAI01128.1| DNA methylase/helicase SNF2 [Acetobacter pasteurianus IFO 3283-01] gi|256638209|dbj|BAI04176.1| DNA methylase/helicase SNF2 [Acetobacter pasteurianus IFO 3283-03] gi|256641263|dbj|BAI07223.1| DNA methylase/helicase SNF2 [Acetobacter pasteurianus IFO 3283-07] gi|256644318|dbj|BAI10271.1| DNA methylase/helicase SNF2 [Acetobacter pasteurianus IFO 3283-22] gi|256647373|dbj|BAI13319.1| DNA methylase/helicase SNF2 [Acetobacter pasteurianus IFO 3283-26] gi|256650426|dbj|BAI16365.1| DNA methylase/helicase SNF2 [Acetobacter pasteurianus IFO 3283-32] gi|256653417|dbj|BAI19349.1| DNA methylase/helicase SNF2 [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656470|dbj|BAI22395.1| DNA methylase/helicase SNF2 [Acetobacter pasteurianus IFO 3283-12] Length = 1708 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 4/95 (4%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G+ +L A+ G G+N Q L + W + + Q RI Q Sbjct: 1345 NAGRKRILIGSTATMGTGVNAQQRLKALHHLDVPWLVADIMQREGRIVR----QGNQHDE 1400 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V +Y Q ++D Q L K L ++ + Sbjct: 1401 VEIYAYAQQGSVDATNWQLLERKMRFIGLAMSGDR 1435 >gi|115442277|ref|NP_001045418.1| Os01g0952200 [Oryza sativa Japonica Group] gi|57899941|dbj|BAD87853.1| putative rad8 [Oryza sativa Japonica Group] gi|113534949|dbj|BAF07332.1| Os01g0952200 [Oryza sativa Japonica Group] gi|218189747|gb|EEC72174.1| hypothetical protein OsI_05224 [Oryza sativa Indica Group] gi|222619881|gb|EEE56013.1| hypothetical protein OsJ_04781 [Oryza sativa Japonica Group] Length = 1298 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 20/136 (14%) Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD-----------KDPCTIQEWNEGKIPL 111 + +I+ F + +++ G K + ++ Sbjct: 1121 LPHTMPDKVIIFSQFLEHIHVIEQQLTIGGITYAGMYSPMPLGSKRSSLTKFKDDPACMA 1180 Query: 112 LFAHPASCGHGLNL-QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 L L L + + + +E ++R + G R +FV L Sbjct: 1181 LVM---DGTAALGLDLSFVSYVFLMEP-----IWDRSMEEQVISRAHRMGATRPIFVETL 1232 Query: 171 IAQNTIDELVLQRLRT 186 + TI+E +L+ L+ Sbjct: 1233 AMRGTIEEQMLKLLQD 1248 >gi|254885063|ref|ZP_05257773.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|254837856|gb|EET18165.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 1665 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T ++ N GK+ +LF G G+N Q + + W + + Sbjct: 1286 QFIQCATTERARKRLFEDMNNGKVRVLFGSTTMLGTGVNAQQRAVAVHHLEIPWRPADME 1345 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V V + T+D L+ K + + Sbjct: 1346 QRNGRAVRKGNTVKLWGGNVVDVVIYGTEKTLDAYKFNLLKNKQMFINQI 1395 >gi|170021860|ref|YP_001726814.1| helicase domain-containing protein [Escherichia coli ATCC 8739] gi|169756788|gb|ACA79487.1| helicase domain protein [Escherichia coli ATCC 8739] Length = 952 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 11/101 (10%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++++ + + PL L G+NL + + ++ F + W L QQ RI Sbjct: 491 KTVEDFGKTQSPLRLLVCSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRID----- 545 Query: 158 QAGFKRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDL 193 + G K + YL+ + + D VL+ L K Sbjct: 546 RYGQKHQPQIRYLLTEASEPQINGDMRVLEVLINKDEQAQK 586 >gi|325680385|ref|ZP_08159938.1| helicase C-terminal domain protein [Ruminococcus albus 8] gi|324107908|gb|EGC02171.1| helicase C-terminal domain protein [Ruminococcus albus 8] Length = 943 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 13/120 (10%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSL 137 + G T + ++E+ + P+ + GLNL Y + L+ F + Sbjct: 466 HMSDKQVVEISGGMTDMEQQRVVEEFGRTEAPVRILVASDVASEGLNLHYLSHRLIHFDI 525 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA------QNTIDELVLQRLRTKSTIQ 191 W L QQ RI Q KR Y LI+ + D +++ L K Sbjct: 526 PWSLMVFQQRNGRIDRYGQ----EKRPDIRYMLISSKNERIKG--DMRIIRILVEKEEQA 579 >gi|218191620|gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indica Group] Length = 952 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 55/191 (28%), Gaps = 51/191 (26%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE------------------------ 45 + L E + + +L N + Sbjct: 512 KNVKRLISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFS 571 Query: 46 ----------KHWKEVHDEKIKALEVIIEKAN---AAPIIVAYHFNSDLARLQKAFPQ-- 90 W E+ K+ L ++ + I++ ++ L + + Sbjct: 572 GRSGSWTGGGGMWVEL-SGKMHVLARLLGHLHLKTDDRIVLVSNYTQTLDLFAQLCRERR 630 Query: 91 --------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++K + ++N+ + + G GLNL GGN L+ F W+ Sbjct: 631 YPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNL-VGGNRLILFDPDWN 689 Query: 141 LEEHQQMIERI 151 +Q+ +R Sbjct: 690 PANDKQVYQRQ 700 >gi|319644055|ref|ZP_07998614.1| DNA methylase [Bacteroides sp. 3_1_40A] gi|317384403|gb|EFV65371.1| DNA methylase [Bacteroides sp. 3_1_40A] Length = 1665 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T ++ N GK+ +LF G G+N Q + + W + + Sbjct: 1286 QFIQCATTERARKRLFEDMNNGKVRVLFGSTTMLGTGVNAQQRAVAVHHLEIPWRPADME 1345 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V V + T+D L+ K + + Sbjct: 1346 QRNGRAVRKGNTVKLWGGNVVDVVIYGTEKTLDAYKFNLLKNKQMFINQI 1395 >gi|315050244|ref|XP_003174496.1| DNA repair protein rad8 [Arthroderma gypseum CBS 118893] gi|311339811|gb|EFQ99013.1| DNA repair protein rad8 [Arthroderma gypseum CBS 118893] Length = 2118 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 101 IQEWNEGK----IPLLFAHP-ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 I E+ GK +L + GLNLQ +I+ F L + + R Sbjct: 1982 ISEFQNGKESVKSKVLILNLGDVTASGLNLQNANHIIFFGPLVAQSQYDYDSGMAQAIGR 2041 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ G + V +Y+++A T++ + + R + + Sbjct: 2042 SRRYGQLKHVHIYHVLALKTVEVNIFE-QRRRQYLAKR 2078 >gi|91076936|ref|XP_975165.1| PREDICTED: similar to DNA repair protein RAD16 [Tribolium castaneum] Length = 1188 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 52/146 (35%), Gaps = 14/146 (9%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD------PC 99 ++ + ++ + + + I++ + L+ +++A + + Sbjct: 1008 GNYSTKVESIVRLILKLRLEDEDVKILLFSTWIPVLSYIREALTKNSVTSELITSGNLEK 1067 Query: 100 TIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+++ + I +L G GLNL ++ + E + R Sbjct: 1068 QIEKFKDADQNITVLLLPINLGGKGLNL-IEATHVILTEPLLNPG-----EELQAIGRVH 1121 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQR 183 + G R V+ ++TI+E + + Sbjct: 1122 RIGQTRPTVVHKFFIKHTIEESIQKA 1147 >gi|255656169|ref|ZP_05401578.1| putative helicase [Clostridium difficile QCD-23m63] Length = 60 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 21/37 (56%) Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 K +V V LIA+ TI+E +++ +K + + +N Sbjct: 3 QKNSVQVIKLIAKGTIEEKIIKLQESKKELINQFING 39 >gi|325104318|ref|YP_004273972.1| N-6 DNA methylase [Pedobacter saltans DSM 12145] gi|324973166|gb|ADY52150.1| N-6 DNA methylase [Pedobacter saltans DSM 12145] Length = 1812 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 2/114 (1%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + + + + I N+GKI +LF + G G+N Q + W Sbjct: 1405 HEVRFIQEAKNDKQRRELINGMNDGKIRVLFGSTSMLGTGVNAQKRAVAVHHLDTPWRPS 1464 Query: 143 EHQQMIERIGVTRQ--RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + Q R + + V V + ++D L K D L Sbjct: 1465 DLAQRDGRAIRKGNEIAKFFAENKVAVIIYAVEKSLDSYKFNLLYNKQLFIDQL 1518 >gi|219883306|ref|YP_002478467.1| helicase domain protein [Arthrobacter chlorophenolicus A6] gi|219862151|gb|ACL42491.1| helicase domain protein [Arthrobacter chlorophenolicus A6] Length = 1606 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 4/90 (4%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+I +L + G G N+Q LV W + +Q RI Q V Sbjct: 1208 SGQIAVLMGSTSKMGVGTNIQKRAVHLVDMDAPWRPSDVEQRHGRILR----QGNQNPEV 1263 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + ++ + + D + Q L KS + ++ Sbjct: 1264 RISQVVTKESFDSFMWQGLERKSRFINQIM 1293 >gi|129282525|gb|ABO30254.1| SNF2 family N-terminal domain protein [Triticum aestivum] Length = 69 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 21/50 (42%) Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +E + + G + + + ++T++E +LQ K + D + Sbjct: 1 VESQAQDQIHRIGQFKPIRSTRFVIKDTVEERILQLQEKKQLVFDGTVGD 50 >gi|108797789|ref|YP_637986.1| helicase-like protein [Mycobacterium sp. MCS] gi|119866881|ref|YP_936833.1| helicase domain-containing protein [Mycobacterium sp. KMS] gi|108768208|gb|ABG06930.1| helicase-like protein [Mycobacterium sp. MCS] gi|119692970|gb|ABL90043.1| helicase domain protein [Mycobacterium sp. KMS] Length = 1201 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 14/106 (13%) Query: 91 GRTLDKDPCTIQ-EWNEGKIPL---LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G T + I+ +N + + G G++LQ + LV F + ++ +Q Sbjct: 711 GSTDGEQREVIRARFNTDPSREKLRILLATDAAGEGIDLQDYCHRLVNFDIPFNPNRLEQ 770 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQN-----TIDELVLQRLRTK 187 I RI + G + + + T D +L R+ K Sbjct: 771 RIGRID-----RYGQTHDPEIRHFATDDEKSQLTRDVDLLARVAKK 811 >gi|254773730|ref|ZP_05215246.1| helicase domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 1136 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 6/93 (6%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + +E+ + + + + G GLNLQ +++V + L W+ +Q Sbjct: 527 HGGVRRLERRVITEEFTKNRGCQILLATDAAGEGLNLQA-AHLMVNYDLPWNPNRIEQRF 585 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 RI + G + ++ L+A NT + V Sbjct: 586 GRI-----HRIGQEEVCRLWNLVASNTREGDVF 613 >gi|147858109|emb|CAN81394.1| hypothetical protein VITISV_043258 [Vitis vinifera] Length = 203 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 17/160 (10%), Positives = 43/160 (26%), Gaps = 25/160 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV---------- 51 + Y Y L + + ++ +L + + E Sbjct: 45 EYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDATEAYKLLLE 104 Query: 52 HDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPC 99 K++ L+ ++ K +++ F L L+ + + Sbjct: 105 SSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDGKVGGAERQV 164 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSL 137 I +N + G G+NL + ++ + Sbjct: 165 RIDRFNAKNSSRFCFLLSTRAGGLGINL-ATADTVIIYDR 203 >gi|329113910|ref|ZP_08242678.1| Hypothetical protein APO_0684 [Acetobacter pomorum DM001] gi|326696776|gb|EGE48449.1| Hypothetical protein APO_0684 [Acetobacter pomorum DM001] Length = 1708 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 4/95 (4%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 N G+ +L A+ G G+N Q L + W + + Q RI Q Sbjct: 1345 NAGRKRILIGSTATMGTGVNAQQRLKALHHLDVPWLVADIMQREGRIVR----QGNQHDE 1400 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V +Y Q ++D Q L K L ++ + Sbjct: 1401 VEIYAYAQQGSVDATNWQLLERKMRFIGLAMSGDR 1435 >gi|240275731|gb|EER39244.1| DNA repair protein RAD8 [Ajellomyces capsulatus H143] Length = 219 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 6/98 (6%) Query: 101 IQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTR 155 I E+ + +L H N ++FF + ++ + R Sbjct: 89 IAEFQTRAEKVESKVLILHLGDVSASGLNLQNANHVIFFHPLFTKSQYDYNSGMAQAIGR 148 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 R+ G ++ V +Y+ +A TI+ + + R + + Sbjct: 149 SRRYGQQKHVHIYHFLALKTIEVNIFE-QRRRERLVKR 185 >gi|119855183|ref|YP_935786.1| helicase domain-containing protein [Mycobacterium sp. KMS] gi|119697900|gb|ABL94971.1| helicase domain protein [Mycobacterium sp. KMS] Length = 976 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 39/121 (32%), Gaps = 6/121 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T +G++ +L G G N+Q + L W +Q Sbjct: 631 FVHEATTAKAREALFAACRDGRVAVLLGSTPKVGIGTNVQNRLHSLHHVDPTWTAAAWEQ 690 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--LNALKKETIH 204 RI QR ++ +A+ T D + + K+ L ++ +E Sbjct: 691 RNGRI----QRNGNQHATAEIHSHVARGTFDAFMFGTVERKARGFAQLYRMDGQAREIED 746 Query: 205 V 205 + Sbjct: 747 I 747 >gi|225681023|gb|EEH19307.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 2092 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 35/87 (40%), Gaps = 5/87 (5%) Query: 101 IQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTR 155 I E+ +G K +L H + N ++FF + ++ + R Sbjct: 1962 ITEFQKGTEKVKSKVLILHLGNVSASGLNLQNANHVIFFHPLFAKSQYDYTSGMAQAIGR 2021 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQ 182 R+ G ++ V +Y +A TI+ + + Sbjct: 2022 SRRYGQQKHVHIYQFLALKTIEVNIFE 2048 >gi|322705986|gb|EFY97568.1| SNF2 family helicase/ATPase, putative [Metarhizium anisopliae ARSEF 23] Length = 1444 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 6/89 (6%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + H + GLNL + + + Q I R+ + Sbjct: 1264 IANFKEDPATEVFLLHARAHSSGLNLVN-ASHVFLCEPLLNTALELQAIARVD-----RI 1317 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 G + V+ + T++E + + Sbjct: 1318 GQQHETTVWLYLVSGTVEESIYNLSVQRR 1346 >gi|159482010|ref|XP_001699066.1| hypothetical protein CHLREDRAFT_177665 [Chlamydomonas reinhardtii] gi|158273129|gb|EDO98921.1| predicted protein [Chlamydomonas reinhardtii] Length = 874 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 31/107 (28%), Gaps = 6/107 (5%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 K ++ A G GLNL +V D Sbjct: 535 MCPIWTSYGSKVEAVVRRIKFVLGEDAAAKLKQGGAGLNLTE-AQHVVLVEPQLDPAA-- 591 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 E V R + G R V+ + +T++E V + ++ D Sbjct: 592 ---EAQAVGRVHRIGQARPTHVHRFVVAHTVEEQVHRLADNRARGMD 635 >gi|302770637|ref|XP_002968737.1| hypothetical protein SELMODRAFT_440558 [Selaginella moellendorffii] gi|300163242|gb|EFJ29853.1| hypothetical protein SELMODRAFT_440558 [Selaginella moellendorffii] Length = 2037 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 47/165 (28%), Gaps = 26/165 (15%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS 79 I A K L Y +++K V + + K L II+ + Sbjct: 771 IRASGKLELMHKML----SHFYLNKKKTLIIVQNTRSKQLMNIIDD-----------YLK 815 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 +G ++ +N + L + N + + + Sbjct: 816 QQFGSYGRIERGMDAQVRQASLTRFNSQDSSCFALLLERGAATSIPNQLTAVDAVFIYDS 875 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 W+ + T + V VY L + T++E +L Sbjct: 876 DWNP-----WSD----TTCIRKLGLNNVTVYRLYSCLTVEEKILD 911 >gi|302797110|ref|XP_002980316.1| hypothetical protein SELMODRAFT_420032 [Selaginella moellendorffii] gi|300151932|gb|EFJ18576.1| hypothetical protein SELMODRAFT_420032 [Selaginella moellendorffii] Length = 1527 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L+ G+ ++ F +E + + G + V+ I +NT++E + + Sbjct: 678 LRQMGSSILEFKENIQP-LLTPAVEAQAINLVHRIGQRLKTLVHRFIIRNTVEENIYKMN 736 Query: 185 RTKSTI 190 + K+ + Sbjct: 737 QQKTNL 742 >gi|47177046|ref|YP_015657.1| methylase protein [Oligotropha carboxidovorans OM5] gi|47115437|emb|CAG28490.1| putative methylase protein [Oligotropha carboxidovorans OM5] Length = 1550 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 4/92 (4%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 GK+ L + G G+N Q L + W + +Q RI Q V Sbjct: 1213 AGKVRFLLGSSDTMGTGVNAQLRLRALHHLDVPWLPSQIEQREGRIVR----QGNQNDEV 1268 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +Y + ++D + Q K+ L+ Sbjct: 1269 DIYAYATEGSLDAQMWQNNERKARFIAAALSG 1300 >gi|56476788|ref|YP_158377.1| SNF2 family helicase [Aromatoleum aromaticum EbN1] gi|56312831|emb|CAI07476.1| helicase (Snf2 family) [Aromatoleum aromaticum EbN1] Length = 959 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 9/126 (7%) Query: 74 AYHFNSDLARLQKAFPQ--GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + L R + +T D ++ + E ++ A + G+NLQ+ ++ Sbjct: 468 QAIYKDWLKRHEGTDRITGSKTADTRAALVEHFKERG-KVMIAT-EAGAEGINLQF-CSL 524 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 ++ + L W+ + +Q I R Q+ N D+ V + L K + Sbjct: 525 VINYDLPWNPQRIEQRIGRCHRYGQKFDVVVVNFV----DLGNEADKRVYELLSQKFQLF 580 Query: 192 DLLLNA 197 + + A Sbjct: 581 EGVFGA 586 >gi|260434755|ref|ZP_05788725.1| superfamily II DNA/RNA helicase, SNF2 family [Synechococcus sp. WH 8109] gi|260412629|gb|EEX05925.1| superfamily II DNA/RNA helicase, SNF2 family [Synechococcus sp. WH 8109] Length = 507 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 56/190 (29%), Gaps = 26/190 (13%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPI 71 L +A + + Q+A + + V + + Sbjct: 317 RAQLGKVRRDAEH-LALLTSIRQIA---AEFKLPAAQQLVESLR----------RQGEAV 362 Query: 72 IVAYHFNSDLARLQKAF-----PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 ++ F + L LQ+ + + ++ + +G+ L A + G L Sbjct: 363 VLFSGFVAPLQLLQQTLGGELLTGRQRPAERQASVDRFQQGQNDCLLATFGTGALGFTLH 422 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +V W + Q +R ++L D+LV L + Sbjct: 423 R-ARHVVLLERPWTPGDLDQAEDRCHRLGMGDGL-----TCHWLQL-GAADQLVDGLLAS 475 Query: 187 KSTIQDLLLN 196 K+ ++LL Sbjct: 476 KAERIEVLLG 485 >gi|224026703|ref|ZP_03645069.1| hypothetical protein BACCOPRO_03460 [Bacteroides coprophilus DSM 18228] gi|224019939|gb|EEF77937.1| hypothetical protein BACCOPRO_03460 [Bacteroides coprophilus DSM 18228] Length = 1659 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T +E N GK+ +LF G G+N Q + + W + + Sbjct: 1286 QFIQCATTERTRKKLFEEMNNGKVRVLFGSTTMLGTGVNAQQRAVAVHHLEIPWRPADME 1345 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V + + T+D LR K + + Sbjct: 1346 QRNGRAVRKGNTVKLWGGNVVDIVIYGTEKTLDAYKFNLLRNKQMFINQI 1395 >gi|119181862|ref|XP_001242109.1| hypothetical protein CIMG_06005 [Coccidioides immitis RS] Length = 832 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 42/131 (32%), Gaps = 20/131 (15%) Query: 50 EVHDEKIKALEVIIEKA---NAAPIIVAYHFNSDLARLQKAFPQGRTLD----------- 95 E KI+AL I+ + +V + S L ++ + Sbjct: 645 EESSSKIQALIKILTAHGQAPGSKTVVFSQWTSFLDLIEPQLVKHNITFTRIDGKMSSTK 704 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 +D N+ ++ A C GLNL N ++ WW IE V R Sbjct: 705 RDVAMATLTNDPNCTVMLASLNVCSVGLNLVA-ANQVILTDSWWAPA-----IEDQAVDR 758 Query: 156 QRQAGFKRAVF 166 + G KR Sbjct: 759 VYRLGQKRPTT 769 >gi|120610429|ref|YP_970107.1| DNA methylase N-4/N-6 domain-containing protein [Acidovorax citrulli AAC00-1] gi|120588893|gb|ABM32333.1| DNA methylase N-4/N-6 domain protein [Acidovorax citrulli AAC00-1] Length = 835 Score = 46.3 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 7/106 (6%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + LD+ I + +G LL P G G N Q + VF + + + Sbjct: 341 WGTQDLDEREDRIVGFGDGAFRLLSTKPVIAGAGCNFQRHCHREVFAGIGFKFRDFI--- 397 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + R + G + V + + + + VL+ L+ K D + Sbjct: 398 --QAIHRVHRFGQTKPVRIDIIHTE--AEREVLRTLQEKWRQHDEV 439 >gi|154335774|ref|XP_001564123.1| SNF2/RAD54 related DNA helicase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061157|emb|CAM38179.1| SNF2/RAD54 related DNA helicase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 958 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 6/96 (6%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + D + + + + ++ G+ + +C G++L VF Sbjct: 480 QWTRDHRKHAVRIDGRVPVQQRGDLLDAFHRGEARIAIIGITACAVGISL-APAQCAVFC 538 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L D R R + G + V VYYL+ Sbjct: 539 ELPPDAA-----WMRQAEDRLHRPGQRDEVVVYYLL 569 >gi|56476802|ref|YP_158391.1| hypothetical protein ebA2431 [Aromatoleum aromaticum EbN1] gi|56312845|emb|CAI07490.1| conserved plasmid related protein [Aromatoleum aromaticum EbN1] Length = 757 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 635 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 688 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL N+ L + K + + + + V Sbjct: 689 SWRIGQKQPVRVIYLGYANSSQMTCLGLMAKKIMVSQSTSGDVPESGLDV 738 >gi|110347115|ref|YP_665933.1| methyltransferase type 11 [Mesorhizobium sp. BNC1] gi|110283226|gb|ABG61286.1| Methyltransferase type 11 [Chelativorans sp. BNC1] Length = 1516 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 51/169 (30%), Gaps = 11/169 (6%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD----LARLQKAFPQG 91 A + K ++ ++ ++ + AY + D + Sbjct: 1099 AGHPYVRHDGKPFELPGAAQMIFSDLGTISVEKSRGFSAYRWIRDELIRMGVPAGEIAFM 1158 Query: 92 RTLDKDPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + K + + GK+ L + G G+N Q L + W + +Q Sbjct: 1159 QDYKKSEAKQRLFGDVRAGKVRFLIGSSETMGTGVNAQLRLKALHHLDVPWLPSQIEQRE 1218 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + ++D + Q K+ L+ Sbjct: 1219 GRIVR----QGNQHDEVDIFAYATEGSLDATMWQNNERKARFIAAALSG 1263 >gi|224003263|ref|XP_002291303.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973079|gb|EED91410.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 69 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 6/61 (9%) Query: 129 GNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK-RAVFVYYLIAQNTIDELVLQRLRTK 187 + + WW+ Q + RI + G K V V + ++++E ++ K Sbjct: 13 ASSVFILDPWWNASVEDQCVNRI-----HRIGQKAEVVRVRKFVVTDSVEEKIVSLQGKK 67 Query: 188 S 188 Sbjct: 68 K 68 >gi|119383720|ref|YP_914776.1| DNA methylase N-4/N-6 domain-containing protein [Paracoccus denitrificans PD1222] gi|119373487|gb|ABL69080.1| DNA methylase N-4/N-6 domain protein [Paracoccus denitrificans PD1222] Length = 883 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 14/153 (9%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLA--------RLQKAFPQGRTLDKDPCTIQEWN 105 +I+ L I + AA I+ + + + + LD+ I ++ Sbjct: 320 ARIEKLMEIRAEDPAAHRIIWHDLEDERRALEKAVPGIVTITGNGSQKLDRREELIGDFA 379 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +G++ L A P G G NLQ VF + + Q I R+ Q V Sbjct: 380 DGRVQELGAKPVMLGSGTNLQRHCAWHVFLGIGHKFNDFIQAIHRLLRFGQPADS----V 435 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + + + + + + L K + ++ + Sbjct: 436 RLDLIYTE--AEREIRRSLERKWRQHNEMVQKM 466 >gi|241568989|ref|XP_002402624.1| conserved hypothetical protein [Ixodes scapularis] gi|215500065|gb|EEC09559.1| conserved hypothetical protein [Ixodes scapularis] Length = 1081 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 65/193 (33%), Gaps = 14/193 (7%) Query: 10 ELYCDLQGE-NIEAFNSASKTVKCLQLANGAVYYDEE--KHWKEVHDEKIKALEVIIEKA 66 ELY DL+ + + K +K ++ + + + + +++ I Sbjct: 411 ELYTDLKERLGVSSVVGHPKLIKLEEIVLDHFKNFGKSAETRVMIFSQYRDSVKEISSYL 470 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQ 126 N ++ N + +G T + ++ + +G +L GL++ Sbjct: 471 NRHRPLIKA-MNFMGQNQKTGTARGFTQKEQLLVVKRFRDGGYNVLV-STCVGEEGLDIG 528 Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 I+ + Q + R G R + + L+++ ++ + Sbjct: 529 EIDLIVC-YDAPKSPIRLVQRMGRTGRKRAGR--------IVVLLSEGKEEQAYRESNSK 579 Query: 187 KSTIQDLLLNALK 199 K T+ +LN + Sbjct: 580 KQTVHRAILNGGR 592 >gi|167851584|ref|ZP_02477092.1| helicase domain protein [Burkholderia pseudomallei B7210] Length = 763 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 33/98 (33%), Gaps = 6/98 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 642 RREDWIAEQLDRGIDVLITNPDLVKTGLDLLEFPTIVFMQSGFNVYTLQ------QAARR 695 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G K+ V V YL NT L + K T+ Sbjct: 696 SWRIGQKQPVKVIYLGYANTSQMTCLSLMAKKITVSQS 733 >gi|241664254|ref|YP_002982614.1| helicase domain-containing protein [Ralstonia pickettii 12D] gi|240866281|gb|ACS63942.1| helicase domain protein [Ralstonia pickettii 12D] Length = 949 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 12/128 (9%) Query: 69 APIIVAYHFNSDLARLQKAFPQ------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I H+ ++ RL Q + + E + +L A G Sbjct: 489 CRYIATAHYVAEQLRLVFPDHQVTAVTGEFAPTEREAAVDAMGEAEQRILVAT-DCLSEG 547 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-IDELVL 181 +NLQ +V + L W+ H+Q R+ Q+ R V L Q+ +D VL Sbjct: 548 INLQNLFTAVVHYDLSWNPTRHEQREGRVDRFGQK----AREVRTTLLYGQDNPVDGAVL 603 Query: 182 QRLRTKST 189 Q + K+ Sbjct: 604 QVILRKAE 611 >gi|226292283|gb|EEH47703.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb18] Length = 2038 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 35/87 (40%), Gaps = 5/87 (5%) Query: 101 IQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTR 155 I E+ +G K +L H + N ++FF + ++ + R Sbjct: 1908 ITEFQKGTEKVKSKVLILHLGNVSASGLNLQNANHVIFFHPLFAKSQYDYTSGMAQAIGR 1967 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQ 182 R+ G ++ V +Y +A TI+ + + Sbjct: 1968 SRRYGQQKHVHIYQFLALKTIEVNIFE 1994 >gi|255559737|ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis] gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring helicase, putative [Ricinus communis] Length = 1588 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 6/76 (7%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I +L +GLNL +V + E ++R + G + V Sbjct: 1451 PIQVLMLLVQHGANGLNLLE-AQHVVLVEPLLNPAA-----ETQAISRVHRIGQENRTLV 1504 Query: 168 YYLIAQNTIDELVLQR 183 + + +NT++E + + Sbjct: 1505 HRFMVKNTVEESIYKL 1520 >gi|317132847|ref|YP_004092161.1| DEAD-like helicase [Ethanoligenens harbinense YUAN-3] gi|315470826|gb|ADU27430.1| DEAD-like helicase [Ethanoligenens harbinense YUAN-3] Length = 2462 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 35/111 (31%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K + G++ +L A G G+N+Q W + +Q Sbjct: 2079 FIHDADTEVKKKELFAKVRAGQVRVLMGSTAKMGAGMNVQDLLIASHDLDCPWRPGDLEQ 2138 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q ++ + + T D + Q + K ++ + Sbjct: 2139 RSGRIIR----QYNTNPEGHIFRYVTEGTFDSYLWQTVENKQKFISQIMTS 2185 >gi|330824360|ref|YP_004387663.1| DEAD-like helicase [Alicycliphilus denitrificans K601] gi|329309732|gb|AEB84147.1| DEAD-like helicase [Alicycliphilus denitrificans K601] Length = 756 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 32/98 (32%), Gaps = 6/98 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 635 RREDWIAEQLDRCIDVLITNPELVKTGLDLLEFPTIVFLQSGYNVYSLQ------QAARR 688 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G K+ V V YL N+ L + K + Sbjct: 689 SWRIGQKQPVRVIYLGYANSSQMTCLGLMARKIMVSQS 726 >gi|255009084|ref|ZP_05281210.1| putative DNA methylase [Bacteroides fragilis 3_1_12] gi|313146833|ref|ZP_07809026.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313135600|gb|EFR52960.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 1659 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T +E N GK+ +LF G G+N Q + + W + + Sbjct: 1286 QFIQCATTERARKKLFEEMNNGKVRVLFGSTTMLGTGVNAQQRAVAVHHLEIPWRPADME 1345 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V + + T+D L+ K + + Sbjct: 1346 QRNGRAVRKGNTVKLWGGNVVDIVIYGTEKTLDAYKFNLLKNKQMFINQI 1395 >gi|293369550|ref|ZP_06616128.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|292635254|gb|EFF53768.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] Length = 1659 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T +E N GK+ +LF G G+N Q + + W + + Sbjct: 1286 QFIQCATTERARKKLFEEMNNGKVRVLFGSTTMLGTGVNAQQRAVAVHHLEIPWRPADME 1345 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V + + T+D LR K + + Sbjct: 1346 QRNGRAVRKGNTVKLWGGNVVDIVIYGTEKTLDAYKFNLLRNKQMFINQI 1395 >gi|327261911|ref|XP_003215770.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase SHPRH-like [Anolis carolinensis] Length = 1698 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 6/78 (7%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + KI +L + +GLN+ ++ + + R + G Sbjct: 1586 FKYDPKINILLLPLHTGSNGLNI-IEATQVLLVEPILNPAHEL-----QAIGRVHRIGQT 1639 Query: 163 RAVFVYYLIAQNTIDELV 180 + V+ + + TI+E + Sbjct: 1640 KPTIVHRFLIKATIEERM 1657 >gi|297561671|ref|YP_003680645.1| helicase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846119|gb|ADH68139.1| helicase domain protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 1057 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 50/124 (40%), Gaps = 18/124 (14%) Query: 89 PQGRTLDKDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 G + ++ + E + +L A + G++LQ + LV + + ++ + Sbjct: 555 HGGMSTEEREALRVAFQKDPGEHPLRILIAT-DAASEGIDLQRHCHRLVNYDIPFNPNKL 613 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLI------AQNTIDELV--LQRLRTKSTIQDLLLN 196 +Q I RI + G + V++ + A ++ + + L R+ TK + L Sbjct: 614 EQRIGRID-----RYGQENPPEVFHFVGTGWEKATDSYEADLEFLSRVATKVARMEEDLG 668 Query: 197 ALKK 200 ++ Sbjct: 669 SVNA 672 >gi|242063764|ref|XP_002453171.1| hypothetical protein SORBIDRAFT_04g001085 [Sorghum bicolor] gi|241933002|gb|EES06147.1| hypothetical protein SORBIDRAFT_04g001085 [Sorghum bicolor] Length = 78 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 7/66 (10%) Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL------- 198 + + + + + V+ Y L+A T++E + +R TK + +++ Sbjct: 2 PTHDLQAIYQVWRYSQTKLVYAYRLMAHRTMEEKIYKRRVTKEGLAARVVDRQQVSRTIS 61 Query: 199 KKETIH 204 K+ET+H Sbjct: 62 KEETLH 67 >gi|53714149|ref|YP_100141.1| putative DNA methylase [Bacteroides fragilis YCH46] gi|52217014|dbj|BAD49607.1| putative DNA methylase [Bacteroides fragilis YCH46] Length = 1659 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T +E N GK+ +LF G G+N Q + + W + + Sbjct: 1286 QFIQCATTERARKKLFEEMNNGKVRVLFGSTTMLGTGVNAQQRAVAVHHLEIPWRPADME 1345 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V + + T+D LR K + + Sbjct: 1346 QRNGRAVRKGNTVKLWGGNVVDIVIYGTEKTLDAYKFNLLRNKQMFINQI 1395 >gi|303271539|ref|XP_003055131.1| SNF2 super family [Micromonas pusilla CCMP1545] gi|226463105|gb|EEH60383.1| SNF2 super family [Micromonas pusilla CCMP1545] Length = 1408 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 36/101 (35%), Gaps = 11/101 (10%) Query: 91 GRTLDKDPCTIQEWNEGKIPLL-FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + + + + + + + G GL Q +++VF L + + Sbjct: 731 STPNAERGEAVDRFRDDERCVAALISIKAGGTGLEFQK-ASVVVFAELPESAADVE---- 785 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNT----IDELVLQRLRT 186 R + G K +V VY+L+A + ID+ + Sbjct: 786 -QAEDRVHRRGQKGSVNVYFLVAHGSALARIDDARWNSIER 825 >gi|238490554|ref|XP_002376514.1| DNA repair helicase rad5,16, putative [Aspergillus flavus NRRL3357] gi|220696927|gb|EED53268.1| DNA repair helicase rad5,16, putative [Aspergillus flavus NRRL3357] Length = 878 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 53/152 (34%), Gaps = 20/152 (13%) Query: 51 VHDEKIKALEVIIEKA---NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKD 97 K++A+ ++ + +V F ++ + F G T D+ Sbjct: 664 KGSPKMRAMLPVLRDQVIVHGEKAMVWTQFPAEQIYVAAILKEANIDAEVFHAGLTRDER 723 Query: 98 PCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ + + +L G+NLQ + ++ + + + R Sbjct: 724 MKLVERFTQKHDECMVLICAYNVNAAGMNLQNLCRNVHILTMSLS-----KSVVNQAIGR 778 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +R FVY +++ DE ++ R K Sbjct: 779 VSRLGQERMTFVYEYRLRSSFDEDLVSRSERK 810 >gi|190015965|ref|YP_001965173.1| putative helicase [Rhodococcus sp. NS1] gi|114796805|gb|ABI79398.1| putative helicase [Rhodococcus sp. NS1] Length = 1102 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 6/86 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + + +L + GLNLQ G ++ + + W+L +Q I R+ Sbjct: 833 KAEIKERFRNRDLTVLIGTDSM-SEGLNLQTCGRLIN-YDMPWNLMRVEQRIGRVDRIGA 890 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQ 182 + V +T+++ V + Sbjct: 891 S----YEHIQVTNYFYADTVEQRVYE 912 >gi|320665547|gb|EFX32593.1| Helicase family protein [Escherichia coli O157:H7 str. LSU-61] Length = 952 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 11/101 (10%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + + + PL L G+NL + + ++ F + W L QQ RI Sbjct: 491 ETVEAFGKTQSPLRLLVCSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRID----- 545 Query: 158 QAGFKRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDL 193 + G K + YL+ + + D VL+ L K Sbjct: 546 RYGQKHQPQIRYLLTEASEPQINGDMRVLEVLINKDEQAQK 586 >gi|224121478|ref|XP_002318592.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222859265|gb|EEE96812.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 726 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 30/96 (31%), Gaps = 8/96 (8%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N + + + G GL+ +VF L R + G Sbjct: 109 DRQNA--VKIAIIGITAGGVGLDF-SSAQNVVFLELPQSPSLML-----QAEDRAHRRGQ 160 Query: 162 KRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 AV +Y A++T+DE Q L + + Sbjct: 161 SNAVNIYIFCAKDTMDETCWQNLNKSLHRVSSITDG 196 >gi|320660619|gb|EFX28080.1| Helicase family protein [Escherichia coli O55:H7 str. USDA 5905] Length = 952 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 11/101 (10%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + + + PL L G+NL + + ++ F + W L QQ RI Sbjct: 491 ETVEAFGKTQSPLRLLVCSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRID----- 545 Query: 158 QAGFKRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDL 193 + G K + YL+ + + D VL+ L K Sbjct: 546 RYGQKHQPQIRYLLTEASEPQINGDMRVLEVLINKDEQAQK 586 >gi|258646416|ref|ZP_05733885.1| conserved hypothetical protein [Dialister invisus DSM 15470] gi|260403819|gb|EEW97366.1| conserved hypothetical protein [Dialister invisus DSM 15470] Length = 482 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 12/105 (11%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 ++ G + L P+ G G+N Q ++F L E+ V R + G K+ Sbjct: 357 FSVGLLKCLITKPSIAGFGMNWQN-CRNVIFVGLSDSYEQFY-----QAVRRCWRFGQKK 410 Query: 164 AVFVYYLIA--QNTIDELVLQRLRTKSTIQDLLL----NALKKET 202 AV VY +I+ + + E + ++ ++D ++ A+K+E Sbjct: 411 AVDVYIIISAKEGCVKENIERKEADSRKMRDAMITLTKQAVKEEL 455 >gi|331028076|ref|YP_004421790.1| helicase [Roseobacter phage RDJL Phi 1] gi|301341539|gb|ADK73423.1| helicase [Roseobacter phage RDJL Phi 1] Length = 512 Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 73/208 (35%), Gaps = 25/208 (12%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-DEEKHWKEVHDEKIKALEV 61 Y ++ + I VK Q+ +G + ++H + ++ AL Sbjct: 300 VYRDLIASTILEVGDQEISLGEYPPGLVKFQQIVSGYLVDEFGDEHTIPGGNPRLDALVD 359 Query: 62 IIEKANAAPIIVAYHFNSDLA----------RLQKAFPQGRTLDKDPCTIQEWN----EG 107 +E+ N +V F D+ R + T + +E+ + Sbjct: 360 EVERTNG-RTVVWCAFRRDMDQVVAALKATGRKVLTYHGRSTDAEKALARKEFAPDKLDS 418 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 K L HP S G GLNL G + ++++S D Q ER + V V Sbjct: 419 KYDDLVGHPKSGGRGLNL-SGADKIIWYSHTTDAVVRFQADERATEVGG------QNVPV 471 Query: 168 YYLIAQNTIDELVL-QRLRTKSTIQDLL 194 IA +DE +L L K+ + + Sbjct: 472 VNFIAPG-VDEYILDDILAPKAETAEDV 498 >gi|320644400|gb|EFX13465.1| Helicase family protein [Escherichia coli O157:H- str. 493-89] gi|320649718|gb|EFX18242.1| Helicase family protein [Escherichia coli O157:H- str. H 2687] Length = 952 Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 11/101 (10%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + + + PL L G+NL + + ++ F + W L QQ RI Sbjct: 491 ETVEAFGKTQSPLRLLVCSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRID----- 545 Query: 158 QAGFKRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDL 193 + G K + YL+ + + D VL+ L K Sbjct: 546 RYGQKHQPQIRYLLTEASEPQINGDMRVLEVLINKDEQAQK 586 >gi|251773068|gb|EES53624.1| DNA/RNA helicase, SNF2 family [Leptospirillum ferrodiazotrophum] Length = 733 Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 2/62 (3%) Query: 3 QYHKFQRELYCDLQGENI--EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y K +EL L + ++ Q+ N + + W K + L Sbjct: 659 LYQKAVKELEETLSEAEGIGRKGKVLAFLMRFKQICNHPSQWRGDGEWAPEESGKFQRLG 718 Query: 61 VI 62 I Sbjct: 719 EI 720 >gi|237719902|ref|ZP_04550383.1| helicase domain-containing protein [Bacteroides sp. 2_2_4] gi|229450454|gb|EEO56245.1| helicase domain-containing protein [Bacteroides sp. 2_2_4] Length = 651 Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T +E N GK+ +LF G G+N Q + + W + + Sbjct: 278 QFIQCATTERARKKLFEEMNNGKVRVLFGSTTMLGTGVNAQQRAVAVHHLEIPWRPADME 337 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V + + T+D L+ K + + Sbjct: 338 QRNGRAVRKGNTVKLWGGNVVDIVIYGTEKTLDAYKFNLLKNKQMFINQI 387 >gi|15804878|ref|NP_290919.1| putative ATP-dependent helicase [Escherichia coli O157:H7 EDL933] gi|168749544|ref|ZP_02774566.1| helicase family protein [Escherichia coli O157:H7 str. EC4113] gi|168754866|ref|ZP_02779873.1| helicase family protein [Escherichia coli O157:H7 str. EC4401] gi|168760541|ref|ZP_02785548.1| helicase family protein [Escherichia coli O157:H7 str. EC4501] gi|168766575|ref|ZP_02791582.1| helicase family protein [Escherichia coli O157:H7 str. EC4486] gi|168773995|ref|ZP_02799002.1| helicase family protein [Escherichia coli O157:H7 str. EC4196] gi|168782811|ref|ZP_02807818.1| helicase family protein [Escherichia coli O157:H7 str. EC4076] gi|168784937|ref|ZP_02809944.1| helicase family protein [Escherichia coli O157:H7 str. EC869] gi|168797866|ref|ZP_02822873.1| helicase family protein [Escherichia coli O157:H7 str. EC508] gi|170683792|ref|YP_001746739.1| helicase family protein [Escherichia coli SMS-3-5] gi|195937309|ref|ZP_03082691.1| helicase domain-containing protein [Escherichia coli O157:H7 str. EC4024] gi|208806552|ref|ZP_03248889.1| helicase family protein [Escherichia coli O157:H7 str. EC4206] gi|208811987|ref|ZP_03253316.1| helicase family protein [Escherichia coli O157:H7 str. EC4045] gi|208818305|ref|ZP_03258625.1| helicase family protein [Escherichia coli O157:H7 str. EC4042] gi|209398792|ref|YP_002273828.1| helicase family protein [Escherichia coli O157:H7 str. EC4115] gi|217326570|ref|ZP_03442654.1| helicase family protein [Escherichia coli O157:H7 str. TW14588] gi|254796304|ref|YP_003081141.1| putative ATP-dependent helicase [Escherichia coli O157:H7 str. TW14359] gi|261226661|ref|ZP_05940942.1| putative ATP-dependent helicase [Escherichia coli O157:H7 str. FRIK2000] gi|261256952|ref|ZP_05949485.1| putative ATP-dependent helicase [Escherichia coli O157:H7 str. FRIK966] gi|291285686|ref|YP_003502504.1| Helicase family protein [Escherichia coli O55:H7 str. CB9615] gi|12519307|gb|AAG59485.1|AE005661_1 putative ATP-dependent helicase [Escherichia coli O157:H7 str. EDL933] gi|170521510|gb|ACB19688.1| helicase family protein [Escherichia coli SMS-3-5] gi|187770256|gb|EDU34100.1| helicase family protein [Escherichia coli O157:H7 str. EC4196] gi|188016143|gb|EDU54265.1| helicase family protein [Escherichia coli O157:H7 str. EC4113] gi|188999742|gb|EDU68728.1| helicase family protein [Escherichia coli O157:H7 str. EC4076] gi|189357770|gb|EDU76189.1| helicase family protein [Escherichia coli O157:H7 str. EC4401] gi|189363963|gb|EDU82382.1| helicase family protein [Escherichia coli O157:H7 str. EC4486] gi|189368951|gb|EDU87367.1| helicase family protein [Escherichia coli O157:H7 str. EC4501] gi|189375059|gb|EDU93475.1| helicase family protein [Escherichia coli O157:H7 str. EC869] gi|189379473|gb|EDU97889.1| helicase family protein [Escherichia coli O157:H7 str. EC508] gi|208726353|gb|EDZ75954.1| helicase family protein [Escherichia coli O157:H7 str. EC4206] gi|208733264|gb|EDZ81951.1| helicase family protein [Escherichia coli O157:H7 str. EC4045] gi|208738428|gb|EDZ86110.1| helicase family protein [Escherichia coli O157:H7 str. EC4042] gi|209160192|gb|ACI37625.1| helicase family protein [Escherichia coli O157:H7 str. EC4115] gi|217322791|gb|EEC31215.1| helicase family protein [Escherichia coli O157:H7 str. TW14588] gi|254595704|gb|ACT75065.1| putative ATP-dependent helicase [Escherichia coli O157:H7 str. TW14359] gi|290765559|gb|ADD59520.1| Helicase family protein [Escherichia coli O55:H7 str. CB9615] gi|320190583|gb|EFW65233.1| putative ATP-dependent helicase [Escherichia coli O157:H7 str. EC1212] gi|320639030|gb|EFX08676.1| Helicase family protein [Escherichia coli O157:H7 str. G5101] gi|320654766|gb|EFX22735.1| Helicase family protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|326345385|gb|EGD69128.1| putative ATP-dependent helicase [Escherichia coli O157:H7 str. 1125] gi|326346760|gb|EGD70494.1| putative ATP-dependent helicase [Escherichia coli O157:H7 str. 1044] Length = 952 Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 11/101 (10%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + + + PL L G+NL + + ++ F + W L QQ RI Sbjct: 491 ETVEAFGKTQSPLRLLVCSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRID----- 545 Query: 158 QAGFKRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDL 193 + G K + YL+ + + D VL+ L K Sbjct: 546 RYGQKHQPQIRYLLTEASEPQINGDMRVLEVLINKDEQAQK 586 >gi|302413908|ref|XP_003004786.1| hypothetical protein VDBG_04392 [Verticillium albo-atrum VaMs.102] gi|261355855|gb|EEY18283.1| hypothetical protein VDBG_04392 [Verticillium albo-atrum VaMs.102] Length = 81 Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 ++ Q ++R+ + G KR V I +N+ +E +++ K + L Sbjct: 1 MEPQYNPAAEAQAVDRV-----HRLGQKRPVQTVRYIMRNSFEEKMIELQDKKKKLASLS 55 Query: 195 LNA 197 ++ Sbjct: 56 MDG 58 >gi|300928441|ref|ZP_07143973.1| protein, SNF2 family [Escherichia coli MS 187-1] gi|300463558|gb|EFK27051.1| protein, SNF2 family [Escherichia coli MS 187-1] Length = 952 Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 11/101 (10%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + + + PL L G+NL + + ++ F + W L QQ RI Sbjct: 491 ETVEAFGKTQSPLRLLVCSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRID----- 545 Query: 158 QAGFKRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDL 193 + G K + YL+ + + D VL+ L K Sbjct: 546 RYGQKHQPQIRYLLTEASEPQINGDMRVLEVLINKDEQAQK 586 >gi|217969400|ref|YP_002354634.1| DEAD-like helicase [Thauera sp. MZ1T] gi|217506727|gb|ACK53738.1| DEAD-like helicase [Thauera sp. MZ1T] Length = 756 Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 635 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFLQSGYNVYSLQ------QAARR 688 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL N+ L + K + + + + V Sbjct: 689 SWRIGQKQPVRVIYLGYANSSQMTCLGLMARKIMVSQSTSGDVPESGLDV 738 >gi|15834515|ref|NP_313288.1| ATP-dependent helicase [Escherichia coli O157:H7 str. Sakai] gi|13364739|dbj|BAB38684.1| putative ATP-dependent helicase [Escherichia coli O157:H7 str. Sakai] Length = 943 Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 11/101 (10%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + + + PL L G+NL + + ++ F + W L QQ RI Sbjct: 482 ETVEAFGKTQSPLRLLVCSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRID----- 536 Query: 158 QAGFKRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDL 193 + G K + YL+ + + D VL+ L K Sbjct: 537 RYGQKHQPQIRYLLTEASEPQINGDMRVLEVLINKDEQAQK 577 >gi|328948587|ref|YP_004365924.1| SNF2-related protein [Treponema succinifaciens DSM 2489] gi|328448911|gb|AEB14627.1| SNF2-related protein [Treponema succinifaciens DSM 2489] Length = 2901 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 6/115 (5%) Query: 92 RTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 T +K +N+ K P + + G++L ++ SL W+ E Q R Sbjct: 1995 NTPEKKEKITSCFNDEKNPCKIIIGGKNTSEGIDLNGNSFVMYNCSLGWNPSETIQAEGR 2054 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I Q V + Y + ++ID ++ Q+ K + + L N K ++++V Sbjct: 2055 IWRQGNLQG----NVHIVYPVMNDSIDSVLYQKHDEKRSRINELWN-YKGDSLNV 2104 >gi|331665952|ref|ZP_08366846.1| ATP-dependent helicase [Escherichia coli TA143] gi|331057003|gb|EGI28997.1| ATP-dependent helicase [Escherichia coli TA143] Length = 952 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 11/101 (10%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + + + PL L G+NL + + ++ F + W L QQ RI Sbjct: 491 KTVEAFGKTQSPLRLLVCSDVASEGINLHHLSHKMIHFDIPWSLMVFQQRNGRID----- 545 Query: 158 QAGFKRAVFVYYLIAQNT-----IDELVLQRLRTKSTIQDL 193 + G K + YL+ + + D VL+ L K Sbjct: 546 RYGQKHQPQIRYLLTEASEPQINGDMRVLEVLINKDEQAQK 586 >gi|325003374|ref|ZP_08124486.1| helicase domain protein [Pseudonocardia sp. P1] Length = 1005 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 48/131 (36%), Gaps = 26/131 (19%) Query: 91 GRTLDKDPCTIQEWNEGK--------IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + D+ + + +L A ++ G++LQ + L+ F + ++ Sbjct: 510 STSSDEREDIRAAFTSPVTEPPGRSAVRVLLATDSAG-EGIDLQDHCHRLINFDVPFNPS 568 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-----IDELVLQRLRTK-------STI 190 +Q I RI + G + +Y+ +T D ++R+ K Sbjct: 569 RLEQRIGRID-----RYGQQEVPEIYHFAPDSTSSTYAADMDFMRRIAEKVGTVANDLGS 623 Query: 191 QDLLLNALKKE 201 + +++A +E Sbjct: 624 VNQIIDADVQE 634 >gi|271969042|ref|YP_003343238.1| helicase domain-containing protein [Streptosporangium roseum DSM 43021] gi|270512217|gb|ACZ90495.1| helicase domain protein [Streptosporangium roseum DSM 43021] Length = 941 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 3/97 (3%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+E + G+NLQ +V + L W+ H+Q R+ Q Sbjct: 520 RLAAIEELGAEPGRHVLVATDCLSEGVNLQEHFQAVVHYDLAWNPTRHEQREGRVDRFGQ 579 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + RAV +Y L N ID +VL L K Sbjct: 580 -RKQTVRAVTMYGL--DNGIDGVVLDVLIRKHRTIAK 613 >gi|198475821|ref|XP_002132503.1| GA27713 [Drosophila pseudoobscura pseudoobscura] gi|198137974|gb|EDY69905.1| GA27713 [Drosophila pseudoobscura pseudoobscura] Length = 163 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 27/101 (26%) Query: 100 TIQEWN---EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ +N + + + G G+NL G N ++ W+ QQ I R Sbjct: 1 MIKRFNSEVNKRARVFLISARAGGQGINL-IGANRVIILDTSWNPSNDQQNIFR------ 53 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 T++E V R TK + +++ Sbjct: 54 -----------------GTMEEKVYSRSVTKQAMSFRVVDE 77 >gi|91784597|ref|YP_559803.1| putative, plasmid-related, DNA/RNA helicase [Burkholderia xenovorans LB400] gi|91688551|gb|ABE31751.1| Putative, plasmid-related, DNA/RNA helicase [Burkholderia xenovorans LB400] Length = 768 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 646 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 699 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V V YL + L+ + K + + + + V Sbjct: 700 SWRIGQKLHVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 749 >gi|40019205|emb|CAE92929.1| putative DNA/RNA helicase [Pseudomonas putida] Length = 759 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKLHVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|222634806|gb|EEE64938.1| hypothetical protein OsJ_19808 [Oryza sativa Japonica Group] Length = 1922 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 14/153 (9%), Positives = 44/153 (28%), Gaps = 10/153 (6%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKA 87 + + D+ + + I I+ + + Sbjct: 604 LRKCCDHPYLVDQSLQSSLTKGHSLTDILDIGSGGGAGNPMGDILDDFVRQRFGFESYER 663 Query: 88 FPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +G + K + +N+ +F + + ++ + W+ + Sbjct: 664 VERGLLVPKKQTALNMFNDKTKGRFIFLIDSRACVPSIKLSSVDAIIIYCSDWNPTNDLR 723 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +++RI + V ++ L + T++E Sbjct: 724 VLQRISIE-----SQSECVPIFRLYSSCTVEEK 751 >gi|71004104|ref|XP_756718.1| hypothetical protein UM00571.1 [Ustilago maydis 521] gi|46095987|gb|EAK81220.1| hypothetical protein UM00571.1 [Ustilago maydis 521] Length = 1605 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 36/125 (28%), Gaps = 12/125 (9%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----------GRTLDKDPCTIQ 102 K+ + +V + L R+QK+ D+ Sbjct: 1470 GKLDQSLEAYDSYEPVKSVVFSQWTKMLDRIQKSLNITGIRYTRLDGTMSRPDRTAALEA 1529 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + I +L + G GLNL +W+ Q ++RI Q + Sbjct: 1530 FKRDAGIEVLLVSLRAGGTGLNLVSAC-RAYLMDPYWNPAVENQGLDRIHRMGQTRPHRG 1588 Query: 163 RAVFV 167 + + Sbjct: 1589 KHAEI 1593 >gi|88706065|ref|ZP_01103773.1| helicase SNF2 family protein [Congregibacter litoralis KT71] gi|88699779|gb|EAQ96890.1| helicase SNF2 family protein [Congregibacter litoralis KT71] Length = 643 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 13/120 (10%) Query: 89 PQGRTLDKDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 G ++ + + + +L A + G++LQ N L+ + ++ Sbjct: 522 HGGMDQEEREDVKAAFQTNPKDADVRILLAT-DAASEGIDLQNYCNCLMHLEIPYNPNVM 580 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--LNALKKET 202 +Q RI Q+ + V +++ + D K I L L +++++ Sbjct: 581 EQRNGRIDRHGQK----ESEVLIWHPVDAGDSDGK--AVGGHKEDIIRALRKLESMREDM 634 >gi|124267554|ref|YP_001021558.1| plasmid-like protein [Methylibium petroleiphilum PM1] gi|124260329|gb|ABM95323.1| conserved plasmid-related protein [Methylibium petroleiphilum PM1] Length = 757 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 635 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFLQSGYNVYSLQ------QAARR 688 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL N+ L + K + + + + V Sbjct: 689 SWRIGQKQPVRVIYLGYANSSQMTCLGLMAKKIMVSQSTSGDVPESGLDV 738 >gi|121594565|ref|YP_986461.1| helicase domain-containing protein [Acidovorax sp. JS42] gi|120606645|gb|ABM42385.1| helicase domain protein [Acidovorax sp. JS42] Length = 756 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 635 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFLQSGYNVYSLQ------QAARR 688 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL N+ L + K + + + + V Sbjct: 689 SWRIGQKQPVRVIYLGYANSSQMTCLGLMAKKIMVSQSTSGDVPESGLDV 738 >gi|254884231|ref|ZP_05256941.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|254837024|gb|EET17333.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 1658 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 1/109 (0%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + + N G + +LF + G G+N Q + + W + +Q Sbjct: 1290 FIQTAKTEQERKKLFTDMNNGTVRVLFGSTSMLGTGVNAQQRAVAVHHLEVPWRPADLEQ 1349 Query: 147 MIERIGVTRQRQAG-FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R V + + T+D LR K + + Sbjct: 1350 RNGRAVRKGNTVKFWGGNVVDIIIYGTEKTLDAYKFNLLRNKQLFINQI 1398 >gi|163855783|ref|YP_001630081.1| hypothetical protein Bpet1476 [Bordetella petrii DSM 12804] gi|163259511|emb|CAP41811.1| conserved plasmid related protein [Bordetella petrii] Length = 615 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 493 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 546 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V V YL + L+ + K + + + + V Sbjct: 547 SWRIGQKLHVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 596 >gi|218197392|gb|EEC79819.1| hypothetical protein OsI_21272 [Oryza sativa Indica Group] Length = 2036 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 14/153 (9%), Positives = 44/153 (28%), Gaps = 10/153 (6%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKA 87 + + D+ + + I I+ + + Sbjct: 698 LRKCCDHPYLVDQSLQSSLTKGHSLTDILDIGSGGGAGNPMGDILDDFVRQRFGFESYER 757 Query: 88 FPQGRTLDKDPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +G + K + +N+ +F + + ++ + W+ + Sbjct: 758 VERGLLVPKKQTALNMFNDKTKGRFIFLIDSRACVPSIKLSSVDAIIIYCSDWNPTNDLR 817 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +++RI + V ++ L + T++E Sbjct: 818 VLQRISIE-----SQSECVPIFRLYSSCTVEEK 845 >gi|189192276|ref|XP_001932477.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187974083|gb|EDU41582.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 2299 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 18/160 (11%) Query: 44 EEKHWKEVHDEKIKALEVIIEKA----NAAPIIVAYHFNSDLARLQKAFPQGRTLDKD-- 97 E ++ +K+ A+ +I + S + R+ + + Sbjct: 2063 ESHDPDQIFGKKLHAIVQLISEMPPADQGIIFAPNDDLMSVIERVLDHYKIRYATIRQTR 2122 Query: 98 -PCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE-- 149 I+E+ LL + + N + F S + Q + Sbjct: 2123 IAQVIEEFKTNKKPATMKKLLILNLGNPSAAGINLINANHVFFVSPLH--ADDQYKYDSA 2180 Query: 150 -RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + R R+ G + V +Y+++A TID +L+ R K Sbjct: 2181 MAQAIARSRRHGQGKTVHIYHVVALRTIDVDILE-HRHKR 2219 >gi|317126187|ref|YP_004100299.1| helicase [Intrasporangium calvum DSM 43043] gi|315590275|gb|ADU49572.1| helicase domain protein [Intrasporangium calvum DSM 43043] Length = 1068 Score = 45.5 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 52/129 (40%), Gaps = 16/129 (12%) Query: 82 ARLQKAFPQGRTLDKDPCTIQ-EWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFS 136 R + A QG T + + + + +L A ++ G++LQ + LV F Sbjct: 565 YRDRIATIQGSTDAETRELTRARFTADPAQEPVRVLVATDSAG-EGIDLQTHCHRLVNFD 623 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL--IAQNT---IDELVLQRLRTKSTIQ 191 + ++ +Q I RI + G K +++ I++ T D ++R+ K Sbjct: 624 IPFNPSRLEQRIGRID-----RYGQKYTPEIFHFAPISKATTFDADMDFMRRIAEKIGQV 678 Query: 192 DLLLNALKK 200 L ++ + Sbjct: 679 AQDLGSVNQ 687 >gi|219115954|ref|XP_002178772.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409539|gb|EEC49470.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 51 Score = 45.5 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 7/51 (13%), Positives = 19/51 (37%) Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + + R + G + V +Y L+ + ++ + R K ++ Sbjct: 1 DWNPQNDVQAQARCHRIGQTKDVRIYRLVTSRSFEQEMFDRASRKLGLEQA 51 >gi|154149046|ref|YP_001405769.1| Cpp14 [Campylobacter hominis ATCC BAA-381] gi|153805055|gb|ABS52062.1| Cpp14 [Campylobacter hominis ATCC BAA-381] Length = 2117 Score = 45.5 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 3/107 (2%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 G + K Q+ N G+I +L A G G N+Q + F + W + Sbjct: 1688 FIHDTGGSNAKKQELFQKVNSGEIRVLIGSTAKMGAGTNVQERVTAIHHFDVPWRPSDFI 1747 Query: 146 QMIERIGVTRQ---RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q R+ ++ + + + +NT D + Q + TKS Sbjct: 1748 QRNGRVIRQGNVLFQKDPDNFKIKEFRYVTENTYDAVSWQIIETKSN 1794 >gi|76157733|gb|AAX28568.2| SJCHGC04949 protein [Schistosoma japonicum] Length = 193 Score = 45.5 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 30/83 (36%), Gaps = 6/83 (7%) Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + +L +GLNL N ++F Q + RI + G R ++ Sbjct: 50 VWILLMPVQLGANGLNLTS-ANHVLFIDPVLSHAREAQAVARI-----HRIGQTRPGIIH 103 Query: 169 YLIAQNTIDELVLQRLRTKSTIQ 191 + +++I+ + + + Sbjct: 104 RFLVKDSIEAALHASQSRNTDLS 126 >gi|317139207|ref|XP_001817347.2| hypothetical protein AOR_1_462174 [Aspergillus oryzae RIB40] Length = 620 Score = 45.5 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 6/78 (7%) Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 GLNLQ N + W+ +E + R + G ++ V V +N+ Sbjct: 525 LDEGAFGLNLQSV-NRVFIVEPQWNPS-----VESQAIARAIRLGQEQQVLVTRYRVENS 578 Query: 176 IDELVLQRLRTKSTIQDL 193 I+E + + K I + Sbjct: 579 IEEAMCSQQTHKLKISQM 596 >gi|57209106|emb|CAI41121.1| SNF2 histone linker PHD RING helicase [Homo sapiens] Length = 129 Score = 45.5 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 26/75 (34%), Gaps = 6/75 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L + +GL + ++ + + R + G + V+ Sbjct: 1 ILLLPLHTGSNGLTI-IEATHVLLVEPILNPAHEL-----QAIGRVHRIGQTKPTIVHRF 54 Query: 171 IAQNTIDELVLQRLR 185 + + TI+E + L+ Sbjct: 55 LIKATIEERMQAMLK 69 >gi|219883155|ref|YP_002478317.1| helicase domain protein [Cyanothece sp. PCC 7425] gi|219867280|gb|ACL47618.1| helicase domain protein [Cyanothece sp. PCC 7425] Length = 1049 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 9/93 (9%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G D + + +L A + GL+LQ + L+ + + W+ Sbjct: 552 MMLYGGMNSDDREAVKAAFQTHPDLSPVRILLAT-DAASEGLDLQNYCSRLIHYEIPWNP 610 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 +Q R+ QR A V +Y+ + + Sbjct: 611 NRMEQRNGRVDRHGQRAA----EVLIYHFVGKG 639 >gi|294644985|ref|ZP_06722718.1| conserved domain protein [Bacteroides ovatus SD CC 2a] gi|292639676|gb|EFF57961.1| conserved domain protein [Bacteroides ovatus SD CC 2a] Length = 765 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T +E N GK+ +LF G G+N Q + + W + + Sbjct: 392 QFIQCATTERARKKLFEEMNNGKVRVLFGSTTMLGTGVNAQQRAVAVHHLEIPWRPADME 451 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V + + T+D LR K + + Sbjct: 452 QRNGRAVRKGNTVKLWGGNVVDIVIYGTEKTLDAYKFNLLRNKQMFINQI 501 >gi|289619832|emb|CBI54115.1| unnamed protein product [Sordaria macrospora] Length = 623 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 3/70 (4%) Query: 133 VFFSLWWDLE---EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + E +ER R + G + + ++ +++ID + + K Sbjct: 491 AIYDFDDKPEIKVLWNSQLERQAFARVYRIGQLKRTHMVRILTKSSIDLRLDAIQKLKEE 550 Query: 190 IQDLLLNALK 199 I D LN K Sbjct: 551 ICDKALNGDK 560 >gi|41057508|ref|NP_957981.1| transcription termination factor NPH-I [Bovine papular stomatitis virus] gi|41018824|gb|AAR98429.1| transcription termination factor NPH-I [Bovine papular stomatitis virus] Length = 638 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 15/132 (11%) Query: 86 KAFPQGRTLDKDPCTIQEWNEG------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 RT D + +N +I + + L N + + W Sbjct: 410 HVEFSSRTRDTRAKLVDAFNACDNTDGERIKVCVFSLSGTEGLSFL--SINDIFILDMTW 467 Query: 140 DLEEHQQMIERIGVTRQRQAG--FKRAVFVYYLIAQN-----TIDELVLQRLRTKSTIQD 192 + +Q++ R + +R V V++++A+ T+DE +L ++ KS Sbjct: 468 NEASLRQIVGRAVRLNSHEMTPAERRYVNVHFVVARQDSGAATVDEDLLDLIKDKSRQFT 527 Query: 193 LLLNALKKETIH 204 L LK+ ++ Sbjct: 528 QLFRVLKRSSLE 539 >gi|294810382|ref|ZP_06769041.1| conserved domain protein [Bacteroides xylanisolvens SD CC 1b] gi|294442419|gb|EFG11227.1| conserved domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 723 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T +E N GK+ +LF G G+N Q + + W + + Sbjct: 350 QFIQCATTERARKKLFEEMNNGKVRVLFGSTTMLGTGVNAQQRAVAVHHLEIPWRPADME 409 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V + + T+D LR K + + Sbjct: 410 QRNGRAVRKGNTVKLWGGNVVDIVIYGTEKTLDAYKFNLLRNKQMFINQI 459 >gi|253567328|ref|ZP_04844777.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251943897|gb|EES84425.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 830 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + T +E N GK+ +LF G G+N Q + + W + + Sbjct: 457 QFIQCATTERARKKLFEEMNNGKVRVLFGSTTMLGTGVNAQQRAVAVHHLEIPWRPADME 516 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V + + T+D LR K + + Sbjct: 517 QRNGRAVRKGNTVKLWGGNVVDIVIYGTEKTLDAYKFNLLRNKQMFINQI 566 >gi|254297099|ref|ZP_04964552.1| dead/deah box helicase [Burkholderia pseudomallei 406e] gi|157807295|gb|EDO84465.1| dead/deah box helicase [Burkholderia pseudomallei 406e] Length = 755 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 6/98 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 633 RREDWIAEQLDRGIDVLITNPDLVKTGLDLLEFPTIVFMQSGYNVYTLQ------QAARR 686 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G K+ + V YL +T L + K + Sbjct: 687 SWRIGQKQPIKVIYLGYADTSQMHCLTLMAKKIAVSQS 724 >gi|134095189|ref|YP_001100264.1| putative helicase from plasmid origin [Herminiimonas arsenicoxydans] gi|133739092|emb|CAL62140.1| Conserved hypothetical protein, putative helicase [Herminiimonas arsenicoxydans] Length = 759 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K +V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKLSVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|107102061|ref|ZP_01365979.1| hypothetical protein PaerPA_01003109 [Pseudomonas aeruginosa PACS2] Length = 759 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K +V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKLSVRVIYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|328773083|gb|EGF83120.1| hypothetical protein BATDEDRAFT_85764 [Batrachochytrium dendrobatidis JAM81] Length = 1198 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 6/97 (6%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 G + + S GL L ++++ + IE+ +TR Sbjct: 1069 QSVTTFSESGDVVAFMLNAKSHSSGLTLVCAMHVILIEP------LLNRSIEQQAITRVH 1122 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + G + V+ I NTI++ +++ + ++ + + Sbjct: 1123 RIGQQNETHVWRYIVHNTIEKQIVKLADQRMSVSNQI 1159 >gi|302822210|ref|XP_002992764.1| hypothetical protein SELMODRAFT_430932 [Selaginella moellendorffii] gi|300139409|gb|EFJ06150.1| hypothetical protein SELMODRAFT_430932 [Selaginella moellendorffii] Length = 253 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 20/50 (40%) Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 I + + + G + V + I +++++E + Q K + L Sbjct: 186 SNIPAVAPSSESSIGQTKNVSIKRFIVKDSVEERMQQVQARKQRLIAGAL 235 >gi|222623720|gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japonica Group] Length = 952 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 53/190 (27%), Gaps = 49/190 (25%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEE------------------------ 45 + L E + + +L N + Sbjct: 512 KNVKRLISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFPPELFS 571 Query: 46 ----------KHWKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLARLQKAFPQ--- 90 W E+ + ++ + I++ ++ L + + Sbjct: 572 GRSGSWTGGGGMWVELSGKMHVLARLLGHLRLKTDDRIVLVSNYTQTLDLFAQLCRERRY 631 Query: 91 -------GRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 +++K + ++N+ + + G GLNL GGN L+ F W+ Sbjct: 632 PYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGCGLNL-VGGNRLILFDPDWNP 690 Query: 142 EEHQQMIERI 151 +Q+ +R Sbjct: 691 ANDKQVYQRQ 700 >gi|38638515|ref|NP_943101.1| putative RNA polymerase [Pseudomonas sp. ND6] gi|237797144|ref|YP_002887434.1| putative RNA/DNA helicase [Pseudomonas fluorescens] gi|34335303|gb|AAP44201.1| putative RNA polymerase [Pseudomonas sp. ND6] gi|229424281|gb|ACQ63505.1| putative RNA/DNA helicase [Pseudomonas fluorescens] Length = 145 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 9/87 (10%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ G ++ L W+ Q I RI QR+ V + L+ + T+DE + Sbjct: 6 GLNLQTLGTLIN-VDLPWNPTRLGQRIGRIKRFGQRR----ETVDMLNLVFEQTVDEKIY 60 Query: 182 QRLRTKS----TIQDLLLNALKKETIH 204 +RL + + L + +K E I Sbjct: 61 ERLSERMKNRYDLFGSLADTIKDEWID 87 >gi|302838632|ref|XP_002950874.1| SNF2 family Chromodomain-helicase protein [Volvox carteri f. nagariensis] gi|300263991|gb|EFJ48189.1| SNF2 family Chromodomain-helicase protein [Volvox carteri f. nagariensis] Length = 3332 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 6/83 (7%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 ++ A G G NL + ++ F W ++ + R + G + V+ L Sbjct: 1325 IVLATSRILGLGTNLPSVRS-VIIFDSDWHP-----RLDMQALRRAFRLGEPGQLAVFRL 1378 Query: 171 IAQNTIDELVLQRLRTKSTIQDL 193 + T++E +LQ + + ++ Sbjct: 1379 YVRGTVEERLLQLVDRRRGLEQA 1401 >gi|302343997|ref|YP_003808526.1| helicase domain protein [Desulfarculus baarsii DSM 2075] gi|301640610|gb|ADK85932.1| helicase domain protein [Desulfarculus baarsii DSM 2075] Length = 1065 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 40/125 (32%), Gaps = 22/125 (17%) Query: 67 NAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCTIQEWNEGK----I 109 N +I+ + + + D+ + + Sbjct: 524 NGKRVILFTEYRATHSWLHQILTANGYGGDRLMYLHGSMPPDEREPVKAAFQAHPDISPV 583 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G++LQ N L+ + W+ +Q RI Q+ + VF+++ Sbjct: 584 RILLAT-DAASEGIDLQNHCNYLIHVEIPWNPNVMEQRNGRIDRHGQK----EDTVFIWH 638 Query: 170 LIAQN 174 + + Sbjct: 639 PVGKG 643 >gi|126664931|ref|ZP_01735914.1| helicase [Marinobacter sp. ELB17] gi|126630301|gb|EBA00916.1| helicase [Marinobacter sp. ELB17] Length = 186 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 6/101 (5%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + K +L + G G+NLQ+ ++L+ + L W+ ++ +Q I R+ Q Sbjct: 2 KAALVDCFKSDKADILV-STEAGGEGINLQF-CSVLINYDLPWNPQKVEQRIGRVHRYGQ 59 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + +N D+ V Q L K + + + A Sbjct: 60 KNDVVVVNFVNR----KNPADQRVFQLLNEKLKLFEGVFGA 96 >gi|295673276|ref|XP_002797184.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb01] gi|226282556|gb|EEH38122.1| DNA repair protein rad8 [Paracoccidioides brasiliensis Pb01] Length = 2095 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 7/110 (6%) Query: 101 IQEWNEG----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-IGVTR 155 I E+ K +L H N ++FF + ++ + R Sbjct: 1965 ITEFQTETEKVKSKVLILHLGDVSASGLNLQNANHVIFFHPLFAKSQYDYTSGMAQAIGR 2024 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQ--RLRTKSTIQDLLLNALKKETI 203 R+ G ++ V +Y +A TI+ + + R ++ + E + Sbjct: 2025 SRRYGQQKHVHIYQFLALKTIEVNIFEHRRRERLVKRDGQFISLPRTEML 2074 >gi|37676486|ref|NP_936882.1| hypothetical protein VVA0828 [Vibrio vulnificus YJ016] gi|37201028|dbj|BAC96852.1| conserved hypothetical protein [Vibrio vulnificus YJ016] Length = 4392 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 55/204 (26%), Gaps = 29/204 (14%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 + ++ + + + V+ + E+ +K + LE I + NA+ Sbjct: 2566 DSRLEIHEGEMPYSTTLQELVE---------RINTMADTGEIDADKYEKLEETIRELNAS 2616 Query: 70 PIIVAYHF------------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + F T K + +G + +L Sbjct: 2617 TLTADTGFSVYDDLKAALIEKGIPEDQIAFIHDYNTTKKKEALFDQVRDGDVRVLIGSSM 2676 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR--------QAGFKRAVFVYY 169 G G N+Q L W + +Q RI V + Sbjct: 2677 KMGAGTNVQDRLVALHHMDAPWRPSDMEQREGRIVRQGNTFYERAAKAGKPEDFEVELVA 2736 Query: 170 LIAQNTIDELVLQRLRTKSTIQDL 193 Q + D ++ Q L K+ + Sbjct: 2737 YTTQGSSDPVMWQILERKAGAIEQ 2760 >gi|222083249|ref|YP_002542652.1| helicase SNF2 family [Agrobacterium vitis S4] gi|221738629|gb|ACM39467.1| helicase SNF2 family [Agrobacterium vitis S4] Length = 1697 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 58/200 (29%), Gaps = 16/200 (8%) Query: 10 ELYCDLQGENIEAFNSASKTVK----CLQLANGAVYYDEEKHWKEVHDEKIKALEVI-IE 64 +L + E N + ++ Q + + Y + ++ + Sbjct: 1255 DLRLVMPVMEDEPDNKLNLLIRNAYRIWQETSHSTYIRPDGKPYDLPGAAQMIFSDLGTI 1314 Query: 65 KANAAPIIVAYHFNSD----LARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPA 117 + AY + D L + K + + GK+ L Sbjct: 1315 NVEKSRGFSAYRWIRDELIRLGVPASEIAFMQEYKKTEAKQRLFGDVRAGKVRFLIGSSE 1374 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+N Q L + W + +Q RI Q V ++ Q ++D Sbjct: 1375 TMGTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVR----QGNQHNEVDIFAYATQGSLD 1430 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 + Q K+ L+ Sbjct: 1431 ATMWQNNERKARFIAAALSG 1450 >gi|123428290|ref|XP_001307448.1| hypothetical protein [Trichomonas vaginalis G3] gi|121889077|gb|EAX94518.1| hypothetical protein TVAG_219240 [Trichomonas vaginalis G3] Length = 1188 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 59/188 (31%), Gaps = 22/188 (11%) Query: 9 RELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVH-------------DE 54 +E L +A +K + + D H + + + Sbjct: 313 KEFVSKLSENKGDAHEKTCGIIKFLRECGDHPSLVDSSIHSELISMSGKTSILSRLLSSQ 372 Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFA 114 K + I+ ++ I+ F+ + + D + Q +E +L Sbjct: 373 KTDKRKSILVASDENSKIIETMFSDNRVSYVCINTEDSKADVEEKVKQFESEDFSRVLLI 432 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 +P + + + I+ + L W + I + + Y L+ Q+ Sbjct: 433 NPENMNYAVANTKSQTIIS-YDLSWTPVDSGSEII-LWNAKVPNTQQ------YRLVTQD 484 Query: 175 TIDELVLQ 182 TI++++ + Sbjct: 485 TIEQIMFE 492 >gi|320355158|ref|YP_004196497.1| hypothetical protein Despr_3073 [Desulfobulbus propionicus DSM 2032] gi|320123660|gb|ADW19206.1| hypothetical protein Despr_3073 [Desulfobulbus propionicus DSM 2032] Length = 535 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 53/181 (29%), Gaps = 16/181 (8%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA 82 N +K + L++ + K+ + P +V + A Sbjct: 220 INLLAKEKRLLEI----------LTTERKQGRKVAVFLEHTGTRDLVPTLVDKLHHHGFA 269 Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 L + +++ G+ L +P GL+L I+ F + Sbjct: 270 PLVLRGQAVKPENRESWLKDHLETGQYDCLLCNPNLVKTGLDLLDFPTIVFFQCGYSVFT 329 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 R R + G V V+YL T+ + L + K + L + Sbjct: 330 L------RQASRRSWRIGQNLPVRVFYLAYAETMQDKALSLMAQKMETSLAVEGELSGQG 383 Query: 203 I 203 + Sbjct: 384 L 384 >gi|228988765|ref|ZP_04148841.1| hypothetical protein bthur0001_54110 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228770945|gb|EEM19435.1| hypothetical protein bthur0001_54110 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 1116 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 13/113 (11%), Positives = 34/113 (30%), Gaps = 6/113 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 D+ I++ ++ G++L I+ + W + Sbjct: 843 SCKTDRRTEWIEKKVSEGYNVIITSIKLVKVGVDLLITPTIMFYQYCWSMFDMI------ 896 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G + V+Y + T E + + K+ + + + + Sbjct: 897 QAKNRAFRIGQTQECRVFYFAYKGTFQEYMALIIAKKNKASQAIGGEVTSDGL 949 >gi|296811861|ref|XP_002846268.1| conserved hypothetical protein [Arthroderma otae CBS 113480] gi|238841524|gb|EEQ31186.1| conserved hypothetical protein [Arthroderma otae CBS 113480] Length = 1040 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 7/90 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 L + + T + ++E+ +L + G+NLQ + F Sbjct: 854 LNIDSRVYHAALTTKERAELVREFCTSSTSAMVLVCSYSVNSAGMNLQAKCRNIHLFDAA 913 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +Q I R Q + V VY Sbjct: 914 MSEAITRQAIGRCARLGQTRI-----VKVY 938 >gi|163801697|ref|ZP_02195595.1| helicase, putative [Vibrio sp. AND4] gi|159174614|gb|EDP59416.1| helicase, putative [Vibrio sp. AND4] Length = 1149 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 20/186 (10%), Positives = 51/186 (27%), Gaps = 39/186 (20%) Query: 14 DLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH----------DEKIKALEVII 63 L+ E ++ + ++ + D + + K+ +L + Sbjct: 771 QLENEE---SHALTTLMRLRDSSLHPRLSDGGRLDIPKNAKSARVLYGESGKLASLLETL 827 Query: 64 EK--ANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPCTIQ 102 ++ + I+ S + KA + +++ I Sbjct: 828 DRVRSKHEKCIIFAVNKRLQSFLSVTLGQIYNLGPLSVINGDAKAVAKRKSVPTRKSMIA 887 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ + L G N +V W+ + E R + G + Sbjct: 888 DFEAKEGFNLIVMSPVAAGVGLTVVGANHVVHLERHWNPAK-----EAQATDRVYRIGQE 942 Query: 163 RAVFVY 168 + V +Y Sbjct: 943 KEVHIY 948 >gi|322489205|emb|CBZ24460.1| putative SNF2/RAD54 related DNA helicase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 958 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 6/96 (6%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + D + + + + ++ G + +C G++L VF Sbjct: 480 QWTRDHCKRAVRIDGRVPVQQRGDLLHTFHRGDARIAVIGITACAVGISL-APAQCAVFC 538 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L D R R + G + V VYYL+ Sbjct: 539 ELPPDAA-----WMRQAEDRLHRPGQRDEVVVYYLL 569 >gi|114050465|dbj|BAF30951.1| putative RNA polymerase [uncultured bacterium] Length = 145 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 9/87 (10%) Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNLQ G ++ L W+ Q I RI QR+ V + L+ + T+DE + Sbjct: 6 GLNLQTLGTLIN-VDLPWNPTRLGQRIGRIKRFGQRR----ETVDMLNLVFEQTVDEKIY 60 Query: 182 QRLRTKS----TIQDLLLNALKKETIH 204 +RL + + L + +K E I Sbjct: 61 ERLSERMKNRYDLFGSLADTIKDEWID 87 >gi|319764667|ref|YP_004128604.1| dead-like helicase [Alicycliphilus denitrificans BC] gi|317119228|gb|ADV01717.1| DEAD-like helicase [Alicycliphilus denitrificans BC] Length = 759 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL T L+ + K + + + + V Sbjct: 691 SWRIGQKQHVRVIYLGYAATSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|228949844|ref|ZP_04112054.1| hypothetical protein bthur0007_59330 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228809902|gb|EEM56313.1| hypothetical protein bthur0007_59330 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 1116 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 13/113 (11%), Positives = 34/113 (30%), Gaps = 6/113 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 D+ I++ ++ G++L I+ + W + Sbjct: 843 SCKTDRRTEWIEKKVSEGYNVIITSIKLVKVGVDLLITPTIMFYQYCWSMFDMI------ 896 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G + V+Y + T E + + K+ + + + + Sbjct: 897 QAKNRAFRIGQTQECRVFYFAYKGTFQEYMALIIAKKNKASQAIGGEVTSDGL 949 >gi|119383095|ref|YP_914151.1| DNA methylase N-4/N-6 domain-containing protein [Paracoccus denitrificans PD1222] gi|119372862|gb|ABL68455.1| DNA methylase N-4/N-6 domain protein [Paracoccus denitrificans PD1222] Length = 881 Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 12/151 (7%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF------PQGRTLDKDPCTIQEWNEG 107 +I+ L I + AA I+ + ++ A L+K + LD+ I ++ +G Sbjct: 320 GRIEKLMEIRAEDPAAHRIIWHDLEAERAALEKTVPGIATVYGSQDLDQREELIGDFADG 379 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ L A P G G NLQ VF + + Q I R+ Q V + Sbjct: 380 RVQELGAKPVMLGSGTNLQRHCAWHVFLGIGHKFNDFIQAIHRLLRFGQPADS----VRL 435 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + + + + + L K + ++ + Sbjct: 436 DLIYTE--AEREIRRSLERKWRQHNEMVQKM 464 >gi|326774108|ref|ZP_08233390.1| helicase SNF2 family protein [Actinomyces viscosus C505] gi|326636247|gb|EGE37151.1| helicase SNF2 family protein [Actinomyces viscosus C505] Length = 1078 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 16/119 (13%) Query: 91 GRTLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + D+ +N + +L A A+ G++LQ + LV F + ++ +Q Sbjct: 587 STSADEREDIRARFNADPTEEDVRVLVATDAAG-EGIDLQTYCHRLVNFDVPFNPSRLEQ 645 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTID------ELVLQRLRTKSTIQDLLLNALK 199 + RI + G + ++YL + + + L RL K + L A+ Sbjct: 646 RVGRID-----RYGQRETPTIFYLAPVASGEGLYAGHQDFLGRLAEKIATETRDLGAVN 699 >gi|301116782|ref|XP_002906119.1| F-box protein, putative [Phytophthora infestans T30-4] gi|262107468|gb|EEY65520.1| F-box protein, putative [Phytophthora infestans T30-4] Length = 1126 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 7/90 (7%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + + + +L HGL+L + +I + +W + +ER Sbjct: 883 PEIRMKQLTRFRKDPNVNVLLLT-EVGSHGLDLSFVTHIFLMDEIWD------KSLERQV 935 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 ++R + G AV V L + +++ +L+ Sbjct: 936 ISRAHRMGANHAVVVEQLWMRGSVESHMLK 965 >gi|242787021|ref|XP_002480920.1| DNA repair helicase rad5,16, putative [Talaromyces stipitatus ATCC 10500] gi|218721067|gb|EED20486.1| DNA repair helicase rad5,16, putative [Talaromyces stipitatus ATCC 10500] Length = 1135 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 6/119 (5%) Query: 51 VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKI 109 +H+ ++ + II A I + + F + I + N + Sbjct: 926 IHNCLVRKEKQIIWCNFPANQIHVAAVLKECGIDARIFHAKLDYRQRDILIHSFTNTDEC 985 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 +L A GLNL NI+ F+ L + + + R R+ G + V VY Sbjct: 986 QILIMSLAVNALGLNLHPRCNIMHFYDLPI-----TKAVMDQAIGRLRRFGQQLVVIVY 1039 >gi|237809165|ref|YP_002893605.1| helicase domain-containing protein [Tolumonas auensis DSM 9187] gi|237501426|gb|ACQ94019.1| helicase domain protein [Tolumonas auensis DSM 9187] Length = 761 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 35/110 (31%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S W R Sbjct: 639 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGWNIYTLQ------QAARR 692 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL T L + K + + + + V Sbjct: 693 SWRIGQKQHVKVIYLGYAATSQMTCLALMAKKILVSQSTSGDVPESGLDV 742 >gi|116751263|ref|YP_847950.1| helicase domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700327|gb|ABK19515.1| helicase domain protein [Syntrophobacter fumaroxidans MPOB] Length = 1058 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 41/125 (32%), Gaps = 22/125 (17%) Query: 67 NAAPIIVAYHFNSDLAR-------------LQKAFPQGRTLDKDPCTIQEWNEGK----I 109 N +I+ + + + D+ + + Sbjct: 524 NGKRVILFTEYRATHSWLHQILTANGYGGDRLMYLHGSMLPDERESVKAAFQAHPDISPV 583 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G++LQ N L+ + W+ +Q RI Q+ + +VF+++ Sbjct: 584 RILLAT-DAASEGIDLQNHCNYLIHVEIPWNPNVMEQRNGRIDRHGQK----EDSVFIWH 638 Query: 170 LIAQN 174 + + Sbjct: 639 PVGKG 643 >gi|322798230|gb|EFZ20022.1| hypothetical protein SINV_13561 [Solenopsis invicta] Length = 135 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 22/40 (55%) Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 + G K+ +VY +A T++E + R TK ++ +++ Sbjct: 22 RFGQKKPCYVYRFLAAKTMEEKIYNRQVTKLSLSCRVVDE 61 >gi|114631893|ref|XP_001150418.1| PREDICTED: helicase, lymphoid-specific isoform 1 [Pan troglodytes] Length = 718 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 12/134 (8%), Positives = 37/134 (27%), Gaps = 24/134 (17%) Query: 29 TVKCLQLANGAVYYDEEKHWKE----------VHDEKIKALEVIIEKAN--AAPIIVAYH 76 + + N + + K L+ ++ + +++ Sbjct: 564 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 623 Query: 77 FNSDLARLQKAFP----------QGRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNL 125 S L L + + + +N + ++ + + G G+NL Sbjct: 624 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINL 683 Query: 126 QYGGNILVFFSLWW 139 + ++ + W Sbjct: 684 TA-ADTVIIYDSDW 696 >gi|170110062|ref|XP_001886237.1| predicted protein [Laccaria bicolor S238N-H82] gi|164638821|gb|EDR03096.1| predicted protein [Laccaria bicolor S238N-H82] Length = 210 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 31/100 (31%), Gaps = 6/100 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + +I +L H GLN+ + + Sbjct: 7 CLRIDQNSKGQSAAKKFKTDPEILVLLLHGERENAGLNVT-CASRVFLLE-----SVVHH 60 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 E + R + G RA VY A++T++ +L Sbjct: 61 SFEIQAIARIDRMGQTRATEVYCYYAEDTVERNILDLAAR 100 >gi|288940348|ref|YP_003442588.1| DEAD/DEAH box helicase domain-containing protein [Allochromatium vinosum DSM 180] gi|288895720|gb|ADC61556.1| DEAD/DEAH box helicase domain protein [Allochromatium vinosum DSM 180] Length = 683 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 52/188 (27%), Gaps = 31/188 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E + A + Q+ + ++EKI L + Sbjct: 250 AYEHMNHPRLVKIETEQVTAD-------RVRQVC-----------YMTANEEKIPLLLGL 291 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 I IIV + + R+ K ++++ G +P+L Sbjct: 292 IRGWPDGRIIVFVNTKREADRVWGYLQGNGIDTAVLSGDVPQPKRLKLLRDFTNGTLPVL 351 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + +V + L D E++ I R Y Sbjct: 352 VGTDVAARGLHI--PDVTHVVNYDLPEDPEDYVHRIGRTARAGAAGDAVSFVCETYAFCL 409 Query: 173 QNTIDELV 180 + I++ + Sbjct: 410 LD-IEQYI 416 >gi|315222612|ref|ZP_07864501.1| N-6 DNA Methylase [Streptococcus anginosus F0211] gi|315188298|gb|EFU22024.1| N-6 DNA Methylase [Streptococcus anginosus F0211] Length = 2325 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 4/99 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + +G+I +L G G N+Q + + W + +Q Sbjct: 2229 FIHEANTDKQKDELFAKVRKGEIRILIGSTQKMGAGTNVQNKLIAMHDLDVPWRPADLEQ 2288 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 RI Q + V +Y I +NT D + R Sbjct: 2289 RSGRIVR----QGNENKEVNIYRYITENTFDAYLWVRHE 2323 >gi|289183836|ref|YP_003457377.1| NPH-1 [Pseudocowpox virus] gi|288804308|gb|ADC53973.1| NPH-1 [Pseudocowpox virus] Length = 638 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 15/123 (12%) Query: 91 GRTLDKDPCTIQEWNEG------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 RT D + +N +I + + L N + + W+ Sbjct: 415 SRTRDTRAKLVDAFNACDNTDGERIKVCVFSLSGSEGLSFL--SINDIFILDMTWNEASL 472 Query: 145 QQMIERIGVTRQRQA--GFKRAVFVYYLIAQN-----TIDELVLQRLRTKSTIQDLLLNA 197 +Q++ R + +R V V++++A+ T+DE +L +R KS L Sbjct: 473 RQIVGRAVRLNSHEMTPPDRRYVNVHFVVARQDSGAATVDEDLLDLIRDKSRQFTQLFRV 532 Query: 198 LKK 200 LK+ Sbjct: 533 LKR 535 >gi|288804176|gb|ADC53842.1| NPH-1 [Pseudocowpox virus] Length = 638 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 15/123 (12%) Query: 91 GRTLDKDPCTIQEWNEG------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 RT D + +N +I + + L N + + W+ Sbjct: 415 SRTRDTRAKLVDAFNACDNTDGERIKVCVFSLSGSEGLSFL--SINDIFILDMTWNEASL 472 Query: 145 QQMIERIGVTRQRQA--GFKRAVFVYYLIAQN-----TIDELVLQRLRTKSTIQDLLLNA 197 +Q++ R + +R V V++++A+ T+DE +L +R KS L Sbjct: 473 RQIVGRAVRLNSHEMTPPDRRYVNVHFVVARQDSGAATVDEDLLDLIRDKSRQFTQLFRV 532 Query: 198 LKK 200 LK+ Sbjct: 533 LKR 535 >gi|238892834|ref|YP_002917568.1| putative ATP-dependent helicase [Klebsiella pneumoniae NTUH-K2044] gi|238545150|dbj|BAH61501.1| putative ATP-dependent helicase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 1046 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 69/226 (30%), Gaps = 52/226 (23%) Query: 14 DLQGENIEAFNSAS-----KTVKCLQLANGAVYYDEEKHWKEVHDEK--IKALEVIIEKA 66 +++ EA A+ T + Q+ + + + + K + + ++ Sbjct: 457 EIENAQSEAVEEATHYTQPLTNEQKQILDVLRQWAQVAKNQVDSKAKAILDWINTNLKTN 516 Query: 67 NAAPIIVAYHFNSDLARLQKAF----------------PQGRTLDKDPCTIQEWN----E 106 N F Q ++ + Sbjct: 517 NQWNEYRVILFTEYRTTHQWMHEILASHGLAGERLAVLHGSMPQEEREKVKAAFQTSPKA 576 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L A + G++LQ N L+ + ++ +Q RI QRQ + V Sbjct: 577 SAVRILLAT-DAASEGIDLQNYCNYLIHLEIPYNPNVMEQRNGRIDRHGQRQ----KEVV 631 Query: 167 VYYLIAQNTID----------ELVLQRLRTKSTIQDLLLNALKKET 202 +++ + + +D + +L+ LR L +++ + Sbjct: 632 IWHPV--DGVDKVNARIGGHGDDILRALRK--------LESMRADM 667 >gi|148664593|gb|EDK97009.1| mCG1031601 [Mus musculus] Length = 76 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 21/48 (43%) Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + G + V V L N+++E +L+ + K + ++ Sbjct: 1 DLQAQDRAHRIGQQNEVQVLRLCTVNSVEEKILEAAKYKLNVDQKVIQ 48 >gi|315639417|ref|ZP_07894576.1| conserved hypothetical protein [Campylobacter upsaliensis JV21] gi|315480480|gb|EFU71125.1| conserved hypothetical protein [Campylobacter upsaliensis JV21] Length = 2533 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 30/99 (30%), Gaps = 2/99 (2%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T + + N GKI +L G G N+Q L W + +Q R+ Sbjct: 2050 TDKQKQDLFDKVNAGKIRILIGSTMKMGAGTNVQKKNVALHELDCPWRPCDLEQRQGRVI 2109 Query: 153 VTR--QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + + Y + T D + Q K Sbjct: 2110 RQGNEWFEKDKNFCIAHYRYSTEQTYDARMFQVNEQKLK 2148 >gi|120610367|ref|YP_970045.1| DNA methylase N-4/N-6 domain-containing protein [Acidovorax citrulli AAC00-1] gi|120588831|gb|ABM32271.1| DNA methylase N-4/N-6 domain protein [Acidovorax citrulli AAC00-1] Length = 835 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 13/147 (8%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLARLQK------AFPQGRTLDKDPCTIQEWNEG 107 +I + I++ ++ + + LQ + + LD+ I + +G Sbjct: 300 ARIDKVREIVDADPRDSFVIWHDLEDERHALQDAIPEAVSVWGTQDLDEREDRIVGFGDG 359 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 LL P G G N Q + VF + + + + R + G + V + Sbjct: 360 AFRLLSTKPVIAGAGCNFQRHCHREVFAGIGFKFRDFI-----QAIHRVHRFGQTKPVRI 414 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLL 194 + + + VL++++ K D + Sbjct: 415 DIIHTE--AEREVLRKMQEKWRQHDEV 439 >gi|330508278|ref|YP_004384706.1| helicase domain-containing protein [Methanosaeta concilii GP-6] gi|328929086|gb|AEB68888.1| helicase domain protein [Methanosaeta concilii GP-6] Length = 1149 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 15/175 (8%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQK 86 SK + ++ + + K + E LE + + + Sbjct: 475 SKLQRLKEVLKEQGVFADPKMKLLLFTEHKDTLEYLAGDGKDGRPLGK---LREWGLSVT 531 Query: 87 AFPQGRTLDKDPCTIQEWNEGKI-----PLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 G + N +I ++ A A+ G+NLQ+ ++ + + W+ Sbjct: 532 QIHGGMKIGDRDTAGTRINAERIFKEDCQVMAATEAAG-EGINLQF-CWFMINYDIPWNP 589 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q + RI + G ++ + ++ T + VLQ+L + + L+ Sbjct: 590 MRLEQRMGRI-----HRYGQEKDCLILNFVSIKTREGRVLQKLFQRIEQIEKDLD 639 >gi|300725811|ref|ZP_07059279.1| helicase domain protein [Prevotella bryantii B14] gi|299776911|gb|EFI73453.1| helicase domain protein [Prevotella bryantii B14] Length = 948 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 7/87 (8%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + GLNLQ+ ++++ + L W+ + +Q I R + G K V V + Sbjct: 500 IMIATEAAAEGLNLQF-CSLVINYDLPWNPQRIEQRISRC-----HRYGQKYDVVVVNFL 553 Query: 172 -AQNTIDELVLQRLRTKSTIQDLLLNA 197 +N D V Q L TK + + + A Sbjct: 554 NMRNYADVRVFQLLSTKFKLFNDVFGA 580 >gi|311977958|ref|YP_003987078.1| putative ATP-dependent RNA helicase [Acanthamoeba polyphaga mimivirus] gi|82057245|sp|Q7T6X3|YR563_MIMIV RecName: Full=Putative ATP-dependent RNA helicase R563 gi|55664873|gb|AAQ09587.2| helicase conserved C-terminal domain protein [Acanthamoeba polyphaga mimivirus] gi|308204910|gb|ADO18711.1| putative ATP-dependent RNA helicase [Acanthamoeba polyphaga mimivirus] Length = 573 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 62/215 (28%), Gaps = 29/215 (13%) Query: 1 MKQYHKFQRE--LYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKA 58 +K Y+ E ++ + + K + NG V+ + K Sbjct: 349 LKGYNSLTDEDLTIAKIREYSPKFLKILRKIKR----CNGTVFVY--------SNFKEYG 396 Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE------GKIPLL 112 + + Y FN R + + +N KI ++ Sbjct: 397 GIRVFARLLEFHRFKNYEFNGSGPRRFAIWSGDQDPIYKEEVKAVFNNKDNEFGSKIKVI 456 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA----GFKRAVFVY 168 + L + +W+ +Q+I R + V++Y Sbjct: 457 LGSSSIKEGVSFL--RVQEVHIMEPYWNFSRMEQIIGRAIRFCSHKDVELDRQLVKVYIY 514 Query: 169 YLIAQN---TIDELVLQRLRTKSTIQDLLLNALKK 200 + + +IDE +++ K I ALK+ Sbjct: 515 LAVHPDIKMSIDERMMKMALDKKMINSAFEKALKE 549 >gi|319955980|ref|YP_004167243.1| hypothetical protein Nitsa_0222 [Nitratifractor salsuginis DSM 16511] gi|319418384|gb|ADV45494.1| hypothetical protein Nitsa_0222 [Nitratifractor salsuginis DSM 16511] Length = 404 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 50/184 (27%), Gaps = 30/184 (16%) Query: 5 HKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 +R+ L G + A C QL G + + Sbjct: 235 EMLKRDRVLRLPGGVVFAADTPIGLVNGCYQLECGCLKVG------------------LD 276 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 + Y A + + + + G+ Sbjct: 277 YHDTGEREMAEYIKKRWGDSEDVAIMCRWVGQRRI-----FEREFKKAMILSSHAHAEGV 331 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 L + +++V SL + QQ R ++ K + V+ L+++ + E V Q Sbjct: 332 ELSHIEHLIV-ASLDYSTARFQQRNARQASKQR-----KSPINVHILLSRGNVSEAVYQA 385 Query: 184 LRTK 187 + K Sbjct: 386 VALK 389 >gi|154294191|ref|XP_001547538.1| predicted protein [Botryotinia fuckeliana B05.10] gi|150845033|gb|EDN20226.1| predicted protein [Botryotinia fuckeliana B05.10] Length = 1150 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 23/182 (12%), Positives = 53/182 (29%), Gaps = 21/182 (11%) Query: 2 KQYHKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K Y + E + A + +K+ K L +V + K K Sbjct: 941 KFYKSRPKGAEYIPSIANRLQMAQITLAKSEKLRAL------------IVQVDEWKSKGE 988 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK--IPLLFAHPA 117 ++ + L + T + I ++N+ + +L Sbjct: 989 RCLVFVNWPISQWACEQVLTLLEYKVMSLLSSHTSEDRRRIIAQFNDPNHKVDVLLIGFK 1048 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 +GLN ++ ++ Q+ R+ + G K+ + +++ D Sbjct: 1049 LGSYGLNFHGCCCKMIIMEYPSSIDILLQVFGRL-----HRLGQKKEQEIIIFFLEDSFD 1103 Query: 178 EL 179 Sbjct: 1104 GK 1105 >gi|312374467|gb|EFR22018.1| hypothetical protein AND_15887 [Anopheles darlingi] Length = 606 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%) Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 +R + G V V YL+A T D+++ L+ K I + Sbjct: 472 QAESRAHRIGQMDNVTVRYLLAHKTADDIIWAMLQRKQDILTKV 515 >gi|304310353|ref|YP_003809951.1| Superfamily II DNA/RNA helicases, SNF2 family [gamma proteobacterium HdN1] gi|301796086|emb|CBL44290.1| Superfamily II DNA/RNA helicases, SNF2 family [gamma proteobacterium HdN1] Length = 926 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 12/126 (9%) Query: 69 APIIVAYHFNSDLARLQKAFPQ------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I H+ +D R T ++ ++ EG +L A G Sbjct: 480 CRYIATAHYVADHLRKALPKATIESITGEYTPEERRERVEAMEEGDTRILVAT-DCLSEG 538 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-IDELVL 181 +NLQ+ ++ + L W+ H+Q R+ Q V L Q+ +D VL Sbjct: 539 INLQHLFTAVIHYDLAWNPTRHEQREGRVDRFGQ----QAAEVRCTMLYGQDNPVDGFVL 594 Query: 182 QRLRTK 187 + K Sbjct: 595 NVILRK 600 >gi|238596081|ref|XP_002393956.1| hypothetical protein MPER_06230 [Moniliophthora perniciosa FA553] gi|215462197|gb|EEB94886.1| hypothetical protein MPER_06230 [Moniliophthora perniciosa FA553] Length = 277 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 21/188 (11%), Positives = 50/188 (26%), Gaps = 42/188 (22%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR-- 83 A++ + + + V + ++ ++ + ++ LA Sbjct: 36 ATRESRLANPCLHPI-----RISSSVSSKLNYIIDDVLRHSADEKYLIFSESELTLAHVA 90 Query: 84 ---------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + Q ++ C + + GLNL + ++F Sbjct: 91 EGLQLAGVKFLRFTTQVPQQVREQCVLTFETSDLYRVFLMELKHGARGLNL-ITASRVIF 149 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF--------------------VYYLIAQN 174 Q +E + R + G R V V L + Sbjct: 150 CEP-----VWQADVESQAIKRAHRIGQTRPVHGEIIVHLQIWFSGDVHVNPLVKTLAIRG 204 Query: 175 TIDELVLQ 182 T ++ +L+ Sbjct: 205 TAEDKMLE 212 >gi|190344733|gb|EDK36473.2| hypothetical protein PGUG_00571 [Meyerozyma guilliermondii ATCC 6260] Length = 1263 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 6/75 (8%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L HGLN+ + F S W + +E + R + G +AV V LI Sbjct: 1058 LIMDINLAAHGLNITA-ATHVYFTSPVWS-----RSVEAQAIKRAHRIGQTKAVRVETLI 1111 Query: 172 AQNTIDELVLQRLRT 186 +NT++E + ++ Sbjct: 1112 LKNTLEEEIYRKRSQ 1126 >gi|86741418|ref|YP_481818.1| helicase-like protein [Frankia sp. CcI3] gi|86568280|gb|ABD12089.1| helicase-like [Frankia sp. CcI3] Length = 1165 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 54/135 (40%), Gaps = 26/135 (19%) Query: 89 PQGRTLDKDPCTIQEWNEGKI----PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 G ++D+ + +L A + G++LQ + LV + + ++ + Sbjct: 658 HGGLSVDEREQLRLAFQAEPSEHPMRVLLAT-DAASEGIDLQNHCHRLVNYDIPFNPNKL 716 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIA---QNTID---------ELVLQRLRT-KSTI- 190 +Q I RI QR++ + + + ++D V++++ K+ + Sbjct: 717 EQRIGRIDRYGQRRSP-----EIRHFVGSGWSGSVDSFEADLEFLSRVVKKVAQMKADLG 771 Query: 191 -QDLLL-NALKKETI 203 + +L + +++ + Sbjct: 772 SVNAVLSDRVQRRML 786 >gi|325073684|gb|ADY76737.1| PP62 [Orf virus] Length = 638 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 15/123 (12%) Query: 91 GRTLDKDPCTIQEWNEGK------IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 RT D + +N I + + L N + + W+ Sbjct: 415 SRTRDTRAKLVDAFNACDNTDGEKIKVCVFSLSGSEGLSFL--SINDIFILDMTWNEASL 472 Query: 145 QQMIERIGVTRQRQA--GFKRAVFVYYLIAQN-----TIDELVLQRLRTKSTIQDLLLNA 197 +Q++ R + +R V V++++A+ T+DE +L +R KS L Sbjct: 473 RQIVGRAVRLNSHEMTPPDRRYVNVHFVVARQDSGAATVDEDLLALIRDKSRQFTQLFRV 532 Query: 198 LKK 200 LK+ Sbjct: 533 LKR 535 >gi|41057135|ref|NP_957849.1| ORF072 transcription termination factor NPH-I [Orf virus] gi|41018559|gb|AAR98167.1| ORF072 transcription termination factor NPH-I [Orf virus] gi|41018692|gb|AAR98297.1| ORF072 transcription termination factor NPH-I [Orf virus] gi|74230784|gb|ABA00589.1| NPH-1 [Orf virus] Length = 638 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 15/123 (12%) Query: 91 GRTLDKDPCTIQEWNEGK------IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 RT D + +N I + + L N + + W+ Sbjct: 415 SRTRDTRAKLVDAFNACDNTDGEKIKVCVFSLSGSEGLSFL--SINDIFILDMTWNEASL 472 Query: 145 QQMIERIGVTRQRQA--GFKRAVFVYYLIAQN-----TIDELVLQRLRTKSTIQDLLLNA 197 +Q++ R + +R V V++++A+ T+DE +L +R KS L Sbjct: 473 RQIVGRAVRLNSHEMTPPDRRYVNVHFVVARQDSGAATVDEDLLALIRDKSRQFTQLFRV 532 Query: 198 LKK 200 LK+ Sbjct: 533 LKR 535 >gi|14521088|ref|NP_126563.1| putative deah atp-dependent helicase [Pyrococcus abyssi GE5] gi|5458305|emb|CAB49794.1| Putative DEAH ATP-dependent helicase [Pyrococcus abyssi GE5] Length = 973 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 61/197 (30%), Gaps = 16/197 (8%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +++Y +E E ++ K +AN + E + E LE Sbjct: 353 IEEYSAVLQESQVREFRELLDVLKRIKMDTKLNIVANVVKQHVERGEKVIIFTEFKDTLE 412 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 + + + + G K I+++ + L Sbjct: 413 YLRKNLPSLAGLS--------DEDVSILHGGMPSGKVEEEIRKFEKHGK--LLISTDVAS 462 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GLNLQ N+L+ + W + +Q + R+ + KR V Y + +D V Sbjct: 463 EGLNLQ-VANVLINYEAPWTPIKLEQRVGRVW-----RINQKRDVKAYTIFLDTEVDMYV 516 Query: 181 LQRLRTKSTIQDLLLNA 197 L L K + Sbjct: 517 LNNLYRKIMNIKEAIGG 533 >gi|242210463|ref|XP_002471074.1| predicted protein [Postia placenta Mad-698-R] gi|220729864|gb|EED83731.1| predicted protein [Postia placenta Mad-698-R] Length = 833 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 10/89 (11%) Query: 92 RTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K ++++ G LL A G+NL IL+ W ++ QQ+I Sbjct: 344 MPPAKRAAMLKQFARGGRDGARLLILS-AVGLVGVNL-AIACILIIVDTLWSAQQDQQLI 401 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 R+ + + V VY LIA+NT D Sbjct: 402 GRLW-----RDPQAKQVLVYRLIARNTSD 425 >gi|254003169|ref|YP_003052635.1| N-6 DNA methylase [Methylovorus sp. SIP3-4] gi|253987252|gb|ACT52108.1| N-6 DNA methylase [Methylovorus sp. SIP3-4] Length = 1798 Score = 44.4 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 35/131 (26%), Gaps = 12/131 (9%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 + +T + E N G +L A G G N+Q W Sbjct: 1306 HQIRFIHDAKTDLQKSKLFDEMNRGVARILLGSTAKMGAGTNVQKKLVAEHHLDAPWRPS 1365 Query: 143 EHQQMIERIGVTR---QRQAGFKRAVFVYYLIAQNTIDELVLQRLR---------TKSTI 190 + +Q RI + V + + T D + Q + K Sbjct: 1366 DLEQREGRIIRQGNEFYEEDPDGFEVQLLRYATEKTYDGRMWQTIEVKASGIEQFRKGDA 1425 Query: 191 QDLLLNALKKE 201 ++ + E Sbjct: 1426 LQRVIEDISSE 1436 >gi|229021209|ref|ZP_04177848.1| hypothetical protein bcere0030_56290 [Bacillus cereus AH1273] gi|229027226|ref|ZP_04183496.1| hypothetical protein bcere0029_54620 [Bacillus cereus AH1272] gi|228734077|gb|EEL84801.1| hypothetical protein bcere0029_54620 [Bacillus cereus AH1272] gi|228740103|gb|EEL90461.1| hypothetical protein bcere0030_56290 [Bacillus cereus AH1273] Length = 560 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T K ++E + ++ GL+L L+F+ L + L Sbjct: 286 TPPKRSAWLKEQVNSGVNVIICSQELVKVGLDLLAT-PTLIFYQLSFSLFTL-----NQA 339 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + +YL + T E + Q + K+ + + Sbjct: 340 ARRHWRIGQTKQCRTFYLGYRETFQEQMAQLIAQKNKAAEAM 381 >gi|190015064|ref|YP_001966555.1| conserved hypothetical protein [Bacillus cereus] gi|190015330|ref|YP_001966881.1| hypothetical protein pPER272_0010 [Bacillus cereus] gi|218848219|ref|YP_002454899.1| hypothetical protein BCAH820_B0012 [Bacillus cereus AH820] gi|116584740|gb|ABK00855.1| conserved hypothetical protein [Bacillus cereus] gi|116585011|gb|ABK01120.1| conserved hypothetical protein [Bacillus cereus] gi|218540270|gb|ACK92666.1| conserved hypothetical protein [Bacillus cereus AH820] Length = 562 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T K ++E + ++ GL+L L+F+ L + L Sbjct: 286 TPPKRSAWLKEQVNSGVNVIICSQELVKVGLDLLAT-PTLIFYQLSFSLFTL-----NQA 339 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + +YL + T E + Q + K+ + + Sbjct: 340 ARRHWRIGQTKQCRTFYLGYRETFQEQMAQLIAQKNKAAEAM 381 >gi|330468260|ref|YP_004406003.1| helicase SNF2 family protein [Verrucosispora maris AB-18-032] gi|328811231|gb|AEB45403.1| helicase SNF2 family protein [Verrucosispora maris AB-18-032] Length = 939 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 9/121 (7%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 G + +QE+ + L G+NL + L+ + + W L +Q Sbjct: 475 HGGVADSDEQQILQEFELAGSGVRLLFTGDVASEGVNLHQQCHHLIHYDIPWSLIRIEQR 534 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIA---QNTIDEL-VLQRLRTKSTIQDLLLNALKKETI 203 RI QR RA+ L+ ++ D+ V + L + L +++ T Sbjct: 535 NGRIDRYGQRHQPQFRAL----LLTSAREDAKDDRTVSEVLLRREETAHRTLGSVEAATG 590 Query: 204 H 204 H Sbjct: 591 H 591 >gi|206601479|gb|EDZ37964.1| superfamily II DNA/RNA helicase [Leptospirillum sp. Group II '5-way CG'] Length = 957 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 5/102 (4%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 +++ + + + + G+NLQ + ++ + L W+ H+Q R+ Sbjct: 527 PEEREERIMDLGEKSQGSRILVATDCLSEGINLQQYFDAVIHYDLSWNPTRHEQREGRVD 586 Query: 153 VTRQRQAGFKRAVFVY-YLIAQNTIDELVLQRLRTKSTIQDL 193 Q K +V V Y A N +D VL+ + K+ Sbjct: 587 RFGQP----KSSVRVILYYGANNPVDGAVLKVILRKANQIRK 624 >gi|323455802|gb|EGB11670.1| hypothetical protein AURANDRAFT_9232 [Aureococcus anophagefferens] Length = 63 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 6/69 (8%) Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GL L + N V IE R + G +A V LI +T++E Sbjct: 1 GAAGLTLTH-ANTAVILEPSLTPG-----IEAQAAGRISRIGQTKAAKVIRLIVADTVEE 54 Query: 179 LVLQRLRTK 187 +L+ + Sbjct: 55 KILEWQARR 63 >gi|147834946|emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera] Length = 985 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 53/197 (26%), Gaps = 56/197 (28%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE------------------------- 44 + + E ++ + +L N + Sbjct: 459 KNVKKVINEEMKQSKILAYITALKKLCNHPKLIYDTVKSGNPGTSGFEDCMRFFPPEMFS 518 Query: 45 ----------------EKHWKEVHDEKIKALEVI--IEKANAAPIIVAYHFNSDLARLQK 86 E W E+ + ++ + + I++ ++ L + Sbjct: 519 GRLLFLCVRSGAWTGGEGIWVELSGKMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQ 578 Query: 87 AFPQGRTLD----------KDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVF 134 + R K + +N+ + + G GLNL GGN LV Sbjct: 579 LCRERRYPYLRLDGTTSINKRQKLVNRFNDPLKDEFVFLLSSKAGGCGLNL-IGGNRLVL 637 Query: 135 FSLWWDLEEHQQMIERI 151 F W+ +Q+ +R Sbjct: 638 FDPDWNPANDKQVFQRQ 654 >gi|124021752|ref|YP_001016059.1| superfamily II DNA/RNA helicases, SNF2 family protein [Prochlorococcus marinus str. MIT 9303] gi|123962038|gb|ABM76794.1| Superfamily II DNA/RNA helicases, SNF2 family protein [Prochlorococcus marinus str. MIT 9303] Length = 542 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 33/191 (17%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + Q+A K+ A+E ++ A +++ F L Sbjct: 359 LAVLTALRQIAAEF---------------KLPAVETVVAALLAEGQAVVLFSSFVGPLLL 403 Query: 84 LQKAFPQGRTLDK-----DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 LQ+ + + + G LL A A G G L +V Sbjct: 404 LQQRLGGELLTGRQRPGQRQEAVNRFQSGLSSLLLATYAVGGLGYTLHR-ARHVVLLERH 462 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA- 197 W + Q +R ++ D+LV + +K+ ++LL + Sbjct: 463 WTPGDVDQAEDRCHRLGMDGGLTS-----HWFQL-GFADQLVDALIASKAERIEVLLGSR 516 Query: 198 ---LKKETIHV 205 LK++ + V Sbjct: 517 RVGLKRQPLPV 527 >gi|197286326|ref|YP_002152198.1| plasmid ATP-dependent helicase [Proteus mirabilis HI4320] gi|194683813|emb|CAR44896.1| putative plasmid ATP-dependent helicase [Proteus mirabilis HI4320] Length = 987 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 11/100 (11%) Query: 100 TIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++E+ + L L G+NL + + +V F + W L QQ RI + Sbjct: 520 VVEEFGKENSKLRLLVCSDVASEGINLHHLSHKMVHFDVPWSLMVFQQRNGRI-----DR 574 Query: 159 AGFKRAVFVYYLIAQN-----TIDELVLQRLRTKSTIQDL 193 G K + YL+ Q+ + D VL+ L K Sbjct: 575 YGQKHQPEIRYLLTQSDNPRISGDTRVLEVLINKDDQAQK 614 >gi|208702017|ref|YP_002267502.1| hypothetical protein BCH308197_A0251 [Bacillus cereus H3081.97] gi|208657872|gb|ACI30242.1| conserved hypothetical protein [Bacillus cereus H3081.97] Length = 560 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T K ++E + ++ GL+L L+F+ L + L Sbjct: 286 TPPKRSAWLKEQVNSGVNVIICSQELVKVGLDLLAT-PTLIFYQLSFSLFTL-----NQA 339 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + +YL + T E + Q + K+ + + Sbjct: 340 ARRHWRIGQTKQCRTFYLGYRETFQEQMAQLIAQKNKAAEAM 381 >gi|325678768|ref|ZP_08158368.1| hypothetical protein CUS_4284 [Ruminococcus albus 8] gi|324109537|gb|EGC03753.1| hypothetical protein CUS_4284 [Ruminococcus albus 8] Length = 87 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 30/86 (34%), Gaps = 4/86 (4%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L A G G N+Q + + W + +Q RI Q + V ++ + Sbjct: 2 LLGSTAKMGTGTNVQKKLIAVHDLDIPWRPADLEQRAGRIIR----QGNENKQVQIFRYV 57 Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 + T D Q L K ++ + Sbjct: 58 TKGTFDAYSYQTLENKQKFISQIMTS 83 >gi|212528896|ref|XP_002144605.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] gi|210074003|gb|EEA28090.1| SNF2 family helicase, putative [Penicillium marneffei ATCC 18224] Length = 2140 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 1/93 (1%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM-IE 149 G T + I+ + + H + N ++FF+ + ++ Sbjct: 2009 GTTGRRGRNRIKTFAGHDKKVAILHLGTENAAGLNLQNANHVIFFAPFAAKSHYEYQSTI 2068 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 R + G K+ V ++ L+ NT++ +LQ Sbjct: 2069 TQSSGRVIRFGQKKEVHIWNLVTLNTLEVGILQ 2101 >gi|167851521|ref|ZP_02477029.1| SNF2-related:Helicase, C-terminal [Burkholderia pseudomallei B7210] Length = 995 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 20/163 (12%), Positives = 56/163 (34%), Gaps = 38/163 (23%) Query: 65 KANAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCTIQEWN----EG 107 + N +I+ + + + + + ++ + + Sbjct: 469 EWNDRRVILFTEYRTTHQWMHQILASHGFGGERLGLLHGSLSQEEREPIKAAFQASPQDS 528 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +L A + G++LQ N L+ + ++ +Q RI QR ++ V + Sbjct: 529 PVRILLAT-DAASEGIDLQNHCNRLIHLEIPYNPNVMEQRNGRIDRHGQR----EKEVLI 583 Query: 168 YYLI--------AQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 ++ + + E +L+ LR L++++ + Sbjct: 584 WHPVDGGDASGASVGGHGEDILRALRK--------LDSMRADM 618 >gi|325300601|ref|YP_004260518.1| helicase domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324320154|gb|ADY38045.1| helicase domain protein [Bacteroides salanitronis DSM 18170] Length = 1671 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +T + N G I +LF + G G+N Q + + W + + Sbjct: 1296 QFIQTAKTEKARKKIFEGMNNGTIRVLFGSTSMLGTGVNAQQRAVAVHHLEIPWRPADLE 1355 Query: 146 QMIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + V + + T+D LR K + + Sbjct: 1356 QRNGRAVRKGNTVKLWGGNVVDIIIYGTEKTLDAYKFNLLRNKQLFINQI 1405 >gi|70607084|ref|YP_255954.1| XPB/RAD25-related helicase [Sulfolobus acidocaldarius DSM 639] gi|68567732|gb|AAY80661.1| XPB/RAD25-related helicase [Sulfolobus acidocaldarius DSM 639] Length = 467 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 69/209 (33%), Gaps = 29/209 (13%) Query: 2 KQYHKFQR--ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKAL 59 K+Y + ++ EL + + +A + +L N + +KI A+ Sbjct: 281 KKYSRSRKVSELLMLAKKGDSDAIEALKIYNDMRKLVN-------------LAKQKIDAV 327 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQ-----GRTLDKDPCTIQEWNEGKIPLLFA 114 + I+EK I++ + + + + + + + K +L Sbjct: 328 KRIVEKEKGNKILIFTQYVDQAEEIARTINGLLITGKISKSERERILNIFKSMKSGVLVL 387 Query: 115 HPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 L + + + R + G + +Y ++ + Sbjct: 388 TTV---GDEGLDIPDANVGIIVT----GTGSRRQFIQRLGRLLRPGVDKKARLYEIMVRG 440 Query: 175 TIDELVLQRLRTKSTIQDLLLNALKKETI 203 T +E Q L+ K T D+ L++ + + I Sbjct: 441 TAEE--YQALKRKETQMDMFLSSAEDDDI 467 >gi|33862310|ref|NP_893870.1| SNF2/helicase domain-containing protein [Prochlorococcus marinus str. MIT 9313] gi|33640423|emb|CAE20212.1| SWI/SNF family helicase_2 [Prochlorococcus marinus str. MIT 9313] Length = 542 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 33/191 (17%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLAR 83 + Q+A K+ A+E ++ A +++ F L Sbjct: 359 LAVLTALRQIAAEF---------------KLPAVETVVAALLAEGQAVVLFSSFVGPLLL 403 Query: 84 LQKAFPQGRTLDK-----DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 LQ+ + + + G LL A A G G L +V Sbjct: 404 LQQRLGGELLTGRQRPGQRQEAVNRFQSGMSSLLLATYAVGGLGYTLHR-ARHVVLLERH 462 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA- 197 W + Q +R ++ D+LV + +K+ ++LL + Sbjct: 463 WTPGDVDQAEDRCHRLGMDGGLTS-----HWFQL-GFADQLVDSLIASKAERIEVLLGSR 516 Query: 198 ---LKKETIHV 205 LK++ + V Sbjct: 517 RVGLKRQPLPV 527 >gi|297580117|ref|ZP_06942044.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297535763|gb|EFH74597.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 4236 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 8/115 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K G++ +L G G N+Q L W + +Q Sbjct: 2483 FIHDYNTTLKKEALFDRVRRGEVRVLIGSSMKMGAGTNVQNRLVALHHMDAPWRPSDMEQ 2542 Query: 147 MIERIGVTRQ--------RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI V + Q + D ++ Q L K+ + Sbjct: 2543 REGRIVRQGNEFYQRAANAGKPENFEVELIAYTTQGSSDPVMWQILERKAGAIEQ 2597 >gi|126433431|ref|YP_001069122.1| putative helicase [Mycobacterium sp. JLS] gi|126233231|gb|ABN96631.1| putative helicase [Mycobacterium sp. JLS] Length = 565 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +V + L W+ +Q RI + G K ++ ++A++T + V +RL K Q Sbjct: 1 MVNYDLPWNPNRIEQRFGRI-----HRIGQKNVCQLWNMVARDTREGEVFRRLLDKIQEQ 55 Query: 192 DL 193 Sbjct: 56 RA 57 >gi|220936000|ref|YP_002514899.1| DEAD-like helicase [Thioalkalivibrio sp. HL-EbGR7] gi|219997310|gb|ACL73912.1| DEAD-like helicase [Thioalkalivibrio sp. HL-EbGR7] Length = 756 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 635 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 688 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL T L + K T+ + + + V Sbjct: 689 SWRIGQKQPVRVIYLGYAATSQMTCLGLMAKKITVSQSTSGDVPESGLDV 738 >gi|149240015|ref|XP_001525883.1| hypothetical protein LELG_02441 [Lodderomyces elongisporus NRRL YB-4239] gi|146450006|gb|EDK44262.1| hypothetical protein LELG_02441 [Lodderomyces elongisporus NRRL YB-4239] Length = 1729 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 14/113 (12%), Positives = 30/113 (26%), Gaps = 8/113 (7%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFF 135 L R + + ++ + + + GL L + Sbjct: 1557 TKQLKRPRGGQGAMHSASTRTDPVELFKNPANKITCFLLDANAQASGLTLTN-ATHIFLC 1615 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + ++R + G R V+ NT++E V+ K Sbjct: 1616 EPLINTSLEL-----QAISRVHRIGQTRPTTVWMFTIANTVEESVVLTATRKR 1663 >gi|269126774|ref|YP_003300144.1| helicase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268311732|gb|ACY98106.1| helicase domain protein [Thermomonospora curvata DSM 43183] Length = 1038 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 44/121 (36%), Gaps = 18/121 (14%) Query: 92 RTLDKDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 T + E + +L A + G++LQ + LV + + ++ + +Q Sbjct: 549 MTAQDREKLRLAFQKSPAEHPVRILLAT-DAASEGIDLQNHCHRLVNYDIPFNPNKLEQR 607 Query: 148 IERIGVTRQRQAGFKRAVFVYYLI------AQNTIDELV--LQRLRTKSTIQDLLLNALK 199 I RI + G K + + + A ++ + + L R+ K + L + Sbjct: 608 IGRID-----RYGQKHTPEIRHFVGTGWDKAVDSYEADLEFLSRVAKKVAQMEEDLGQVN 662 Query: 200 K 200 Sbjct: 663 A 663 >gi|169609236|ref|XP_001798037.1| hypothetical protein SNOG_07705 [Phaeosphaeria nodorum SN15] gi|111064051|gb|EAT85171.1| hypothetical protein SNOG_07705 [Phaeosphaeria nodorum SN15] Length = 822 Score = 44.4 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 46/131 (35%), Gaps = 9/131 (6%) Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGG 129 + + F + + ++ ++ A P + G+GL L Sbjct: 678 LYRSKWAHKAGVEVLRFDGTTSSQERADRKLQFETKTTFTKIMLATPGAGGYGLEL-STA 736 Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKS 188 ++ WW+ ER +R + G V V+ A N+ ID L L K+ Sbjct: 737 QHVLQLEPWWN-----HNKERQAWSRTHRQGNLNPVTVWRFSASNSLIDSLFLAIAGKKT 791 Query: 189 TIQDLLLNALK 199 + + ++ L+ Sbjct: 792 IVNESVMKYLR 802 >gi|190404406|ref|YP_001961037.1| rcorf62 [Agrobacterium rhizogenes] gi|158322202|gb|ABW33619.1| rcorf62 [Agrobacterium rhizogenes] Length = 1702 Score = 44.4 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 56/200 (28%), Gaps = 16/200 (8%) Query: 10 ELYCDLQGENIEAFNSASKTVK--CL--QLANGAVYYDEEKHWKEVHDEKIKALEVI-IE 64 +L + + E N + V+ Q + Y + ++ + Sbjct: 1254 DLRLVIPANDNEEDNKLNLLVRNAFRIWQETSDDTYVRPDGKPFDLPGAAQMIFSDLGTI 1313 Query: 65 KANAAPIIVAYHFNSD----LARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPA 117 AY + D L + K + + G+I L Sbjct: 1314 NVEKTRGFSAYRWIRDEFVRLGVPPSEIAFMQDYKKTEAKQRLFADVRAGRIRFLIGSSE 1373 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+N Q L + W +Q RI Q V ++ + ++D Sbjct: 1374 TMGTGVNAQARLKALHHLDVPWLPSHIEQREGRIVR----QGNQHDVVDIFAYATEGSLD 1429 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 + Q K+ L+ Sbjct: 1430 ASMWQNNERKARFIAAALSG 1449 >gi|161528452|ref|YP_001582278.1| DEAD/DEAH box helicase domain-containing protein [Nitrosopumilus maritimus SCM1] gi|160339753|gb|ABX12840.1| DEAD/DEAH box helicase domain protein [Nitrosopumilus maritimus SCM1] Length = 502 Score = 44.4 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 26/177 (14%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------- 87 AV+ +E + + KI L+ IIE ++ + + + Sbjct: 318 AVHLAKEAQSRGIEHSKIPKLKDIIESVPG-KALIFTSYRDSVDLIHSKLTELGVSAGIL 376 Query: 88 ----FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 G K +Q++ +G +L A GL++ N ++F+ Sbjct: 377 IGKAGETGLKQKKQIEIVQKFRDGIFDVLIAT-RVGEEGLDI-AEVNQVIFYDNVPS--- 431 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 + I+R + + G K + LIA+NTIDE + K + + + + K Sbjct: 432 SVRFIQR-----RGRTGRKDTGKLVVLIAKNTIDETYYWIGKRKMSASKAMGDKMTK 483 >gi|255725018|ref|XP_002547438.1| predicted protein [Candida tropicalis MYA-3404] gi|240135329|gb|EER34883.1| predicted protein [Candida tropicalis MYA-3404] Length = 1667 Score = 44.4 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 39/148 (26%), Gaps = 11/148 (7%) Query: 46 KHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ--- 102 K + + +I + I+ + + I+ Sbjct: 1444 KQVSFLKSKDPNVQIIIFSQWQDMLFIIGNALKDNRISYMGMNSSVNPDHRRKQLIEDEA 1503 Query: 103 --EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + + GL L + ++ Q I RI + G Sbjct: 1504 SYFKRHNGVTCFLLDAKAQASGLTLTN-ATHIFLCEPLVNISLELQAISRI-----HRIG 1557 Query: 161 FKRAVFVYYLIAQNTIDELVLQRLRTKS 188 K+ V+ +NTI+E ++ K Sbjct: 1558 QKKKTTVWMFAIENTIEESIIITSTDKR 1585 >gi|84516121|ref|ZP_01003481.1| ATP-dependent helicase HepA [Loktanella vestfoldensis SKA53] gi|84509817|gb|EAQ06274.1| ATP-dependent helicase HepA [Loktanella vestfoldensis SKA53] Length = 823 Score = 44.4 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 8/101 (7%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ ++E + +L A G+NLQ + ++ + L W+ HQQ R Sbjct: 391 SIPSEEREIRVEELGGHENRILVAT-DCLSEGINLQGWFDAVIHYDLSWNPTRHQQREGR 449 Query: 151 IGVTRQRQAGFKRAVFVYYLIA--QNTIDELVLQRLRTKST 189 I + G K V L+ N +D VL+ + K+ Sbjct: 450 ID-----RFGQKAPVVRSILMYGENNPVDGAVLEVIIRKAE 485 >gi|229528263|ref|ZP_04417654.1| DNA methylase [Vibrio cholerae 12129(1)] gi|229334625|gb|EEO00111.1| DNA methylase [Vibrio cholerae 12129(1)] Length = 3368 Score = 44.4 bits (103), Expect = 0.011, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 8/115 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K G++ +L G G N+Q L W + +Q Sbjct: 2487 FIHDYNTTLKKEALFDRVRRGEVRVLIGSSMKMGAGTNVQNRLVALHHMDAPWRPSDMEQ 2546 Query: 147 MIERIGVTRQ--------RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI V + Q + D ++ Q L K+ + Sbjct: 2547 REGRIVRQGNEFYQRAANAGKPEDFEVELIAYTTQGSSDPVMWQILERKAGAIEQ 2601 >gi|221635687|ref|YP_002523563.1| helicase, Snf2 family [Thermomicrobium roseum DSM 5159] gi|221157442|gb|ACM06560.1| helicase, Snf2 family [Thermomicrobium roseum DSM 5159] Length = 900 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 6/106 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T + G++ +L + GLNLQ G ++ L W+ +Q RI Sbjct: 736 TRVGRDVLKERVQRGELRILVGT-DAASEGLNLQRLGTLIN-VDLPWNPTRLEQRKGRIQ 793 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q +A VF+ L + ++++ V Q L + + L Sbjct: 794 RIGQPRAV----VFLCNLRYRGSVEDRVHQLLSARFRAIHDMFGQL 835 >gi|116255163|ref|YP_770997.1| putative methylase [Rhizobium leguminosarum bv. viciae 3841] gi|115259811|emb|CAK02905.1| putative methylase [Rhizobium leguminosarum bv. viciae 3841] Length = 1696 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 48/170 (28%), Gaps = 12/170 (7%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVI-IEKANAAPIIVAYHFNSD----LARLQKAFPQ 90 AVY + E+ + AY F D L Sbjct: 1280 TGDAVYRRPDGKDFELPGAAQMIFSDLGTMNVEKTRGFSAYRFIRDELIRLGVPAAEIAF 1339 Query: 91 GRTLDKDPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + K + + GK+ L + G G+N Q L + W + +Q Sbjct: 1340 MQDYKKTEAKQRLFGDVRAGKVRFLIGSSETMGTGVNAQLRLKALHHLDVPWLPSQIEQR 1399 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q V ++ + ++D + Q K+ L+ Sbjct: 1400 EGRIVR----QGNQHDEVDIFAYATEGSLDASMWQNNERKARFIAAALSG 1445 >gi|220930423|ref|YP_002507332.1| helicase [Clostridium cellulolyticum H10] gi|220000751|gb|ACL77352.1| helicase domain protein [Clostridium cellulolyticum H10] Length = 460 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 47/99 (47%), Gaps = 8/99 (8%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 +++G++ L P+ G G+N Q + ++F L E++ V R + G K+ Sbjct: 331 FSKGEVKDLVTKPSIAGFGMNWQT-CSDMIFVGLSDSYEQYY-----QAVRRCYRFGQKK 384 Query: 164 AVFVYYLIA--QNTIDELVLQRLRTKSTIQDLLLNALKK 200 V V+ +I+ + + + + ++ +Q+ ++ K+ Sbjct: 385 PVNVHIVISAKEGCVKDNIERKTSDSLKMQNAMIEYTKE 423 >gi|70732026|ref|YP_261773.1| hypothetical protein PFL_4690 [Pseudomonas fluorescens Pf-5] gi|68346325|gb|AAY93931.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length = 749 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + I +L +P GL+L I+ F +++ Q R Sbjct: 627 RREDWILDQVDRGIDVLITNPELVKTGLDLLDFPTIV-FLQTGYNVYTLQ-----QAARR 680 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K V V +L + LQ + K + L++L ++ V Sbjct: 681 SWRIGQKHPVRVIFLGYAGSSQITCLQLMAKKIAVAQSTSGDVPESGLDSLNQDGDSV 738 >gi|22331785|ref|NP_680129.1| SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein [Arabidopsis thaliana] gi|75181828|sp|Q9M1I1|FB304_ARATH RecName: Full=F-box protein At3g54460 gi|7258349|emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gi|20259494|gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gi|28393845|gb|AAO42330.1| unknown protein [Arabidopsis thaliana] gi|110742559|dbj|BAE99194.1| RING finger -like protein [Arabidopsis thaliana] Length = 1378 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 59/150 (39%), Gaps = 23/150 (15%) Query: 70 PIIVAYHFNSDLARLQK-----------AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 +++ F + +++ + ++ +K N+ L S Sbjct: 1195 KVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADCMALLM-DGS 1253 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 GL+L + ++ + +W + +E ++R + G KR +FV L + TI+E Sbjct: 1254 GALGLDLSFVTHVFLMEPIWD------KSLEEQVISRAHRMGAKRPIFVETLTMRGTIEE 1307 Query: 179 LVLQRLR--TKST--IQDLLLNALKKETIH 204 +++ L KS + + A K+ET Sbjct: 1308 QMMRFLEDAEKSDRLLSGDYIEA-KQETTR 1336 >gi|328541568|ref|YP_004301678.1| Methyltransferase type 11 [Polymorphum gilvum SL003B-26A1] gi|326415710|gb|ADZ72772.1| Methyltransferase type 11 [Polymorphum gilvum SL003B-26A1] Length = 1713 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 47/166 (28%), Gaps = 12/166 (7%) Query: 40 VYYDEEKHWKEVHDEKIKALEVI-IEKANAAPIIVAYHFNSD----LARLQKAFPQGRTL 94 +Y + E+ + AY + D + + Sbjct: 1299 IYLRPDGKPYELPGAAQMIFSDLGTINVEKTRGFSAYRWIRDELIRMGVPATEIAFMQDF 1358 Query: 95 DKDPCTIQEW---NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 K + + GK+ L + G G+N Q L + W + +Q RI Sbjct: 1359 KKTEAKQRLFGDVRAGKVRFLIGSSETMGTGVNAQLRLKALHHLDVPWLPSQIEQREGRI 1418 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q V +Y Q ++D + Q K+ L+ Sbjct: 1419 VR----QGNQHDEVDIYAYATQGSLDATMWQNNERKARFIAAALSG 1460 >gi|242216380|ref|XP_002473998.1| predicted protein [Postia placenta Mad-698-R] gi|220726863|gb|EED80799.1| predicted protein [Postia placenta Mad-698-R] Length = 1043 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 10/89 (11%) Query: 92 RTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 K ++++ G LL A G+NL IL+ W ++ QQ+I Sbjct: 598 MPPAKRAAMLKQFARGGRDGARLLILS-AVGLVGVNL-AIACILIIVDTLWSAQQDQQLI 655 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 R+ + + V VY LIA+NT D Sbjct: 656 GRLW-----RDPQAKQVLVYRLIARNTSD 679 >gi|331213411|ref|XP_003319387.1| DNA repair and recombination protein RAD5C [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309298377|gb|EFP74968.1| DNA repair and recombination protein RAD5C [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 669 Score = 44.0 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 38/133 (28%), Gaps = 19/133 (14%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEV----IIEKANAAPIIV 73 ++ + + V QL N ++EK KI L + N A ++ Sbjct: 499 DSSHFFGELVNLRQLCNHPALIEKEKGTGGYFWNQSSKIVHLLKDLSLFLASGNQARAVI 558 Query: 74 AYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 F L + + + + + +L A + G G Sbjct: 559 FSEFKRFLQIIEIALNERGIQFTTHYGKMDNDTRRKNLEYFRRDVSCKVLLATIKTAGVG 618 Query: 123 LNLQYGGNILVFF 135 ++L + + Sbjct: 619 IDL-RCAHKVYLM 630 >gi|169615006|ref|XP_001800919.1| hypothetical protein SNOG_10656 [Phaeosphaeria nodorum SN15] gi|111060930|gb|EAT82050.1| hypothetical protein SNOG_10656 [Phaeosphaeria nodorum SN15] Length = 682 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 11/155 (7%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI--QEWNEG 107 E D +I++++ +V F + ++ GR + I + G Sbjct: 524 ECRDRDPDCSVIIMDESVYFLDVVQIAFEAMYDPIECLRYDGREFAERRPAIQAEFDKSG 583 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 ++ G GLN+ N+++ WW E + R + G KRAV Sbjct: 584 GHKVMLMSRGVGGLGLNIPS-ANVIIQCCPWWKREWEV-----QAMGRAYREGQKRAVTY 637 Query: 168 YYLIAQNTIDELVL--QRLRTKSTIQDLLLNALKK 200 L A N+ E + + K T ++ AL + Sbjct: 638 IKLTATNSHAE-IYKTKTRDRKHTYNSRVVKALTR 671 >gi|33864575|ref|NP_896134.1| helicase [Synechococcus sp. WH 8102] gi|33632098|emb|CAE06554.1| possible helicase [Synechococcus sp. WH 8102] Length = 539 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 60/200 (30%), Gaps = 33/200 (16%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 F+R L+GE + ++A K+ A E ++ Sbjct: 343 DDFRRRA---LKGEVRSDAEPLAVLTALRRVAAEF---------------KLPAAETLVR 384 Query: 65 K--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----DPCTIQEWNEGKIPLLFAHPA 117 +++ F L LQ+ + + + +G LL A Sbjct: 385 TLLQAGEAVVLFSGFVEPLQLLQQRLGGALLTGRQRPVERQQAVDCFQQGGEDLLLATFG 444 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV-FVYYLIAQNTI 176 + G L +V W + R + G + V ++L Sbjct: 445 TGALGFTLHR-ARHVVLLERPWTPGDV-----AQAEDRCHRLGMEDEVLTCHWLQL-GPA 497 Query: 177 DELVLQRLRTKSTIQDLLLN 196 D+LV + +K+ ++LL Sbjct: 498 DQLVDGLVASKAERIEILLG 517 >gi|169825485|ref|YP_001695660.1| putative helicase [Lysinibacillus sphaericus C3-41] gi|168994762|gb|ACA42301.1| putative helicase [Lysinibacillus sphaericus C3-41] Length = 998 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 57/181 (31%), Gaps = 21/181 (11%) Query: 25 SASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARL 84 + L+ ++E + + K + +I+K + I+ + R Sbjct: 779 IIQQLNSLLKACVNPQEFNEYRSHQMP--SKAVKMLDMIQKWSNDYIVFGCTHIKTVERY 836 Query: 85 QKAFPQGRTL-------------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + ++ I+E + K +L S +N+ + NI Sbjct: 837 EAYIRNAFPDRPLFVITGDKTSLNRRKAIIKELKQSKRGILICTQQSLSSSMNIDFVNNI 896 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + + W+ Q R + V V +N+I+ +LQ + K + Sbjct: 897 V-LLEMLWNFASMHQFFARFIRYTSTEQKEVHFVTV-----ENSIESNMLQLIIAKEKLN 950 Query: 192 D 192 + Sbjct: 951 N 951 >gi|158294994|ref|XP_315948.4| AGAP005917-PA [Anopheles gambiae str. PEST] gi|157015824|gb|EAA11913.5| AGAP005917-PA [Anopheles gambiae str. PEST] Length = 1566 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 38/115 (33%), Gaps = 9/115 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L + + + G + + G++ ++ A A ++ +++ + Sbjct: 1093 LNYVAEPYHAGMPASRRRTIQNAFMSGELRIVVATIAFGMGINK--ADIRAIIHYNMPKN 1150 Query: 141 LEEHQQMIERIGVTRQR-------QAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 E + Q + R G + I N+ID V+++L K Sbjct: 1151 FESYVQEVGRAGRDGLLSHCHLFLDGKGTDRNELRRFIYANSIDRHVIRKLLQKI 1205 >gi|153011948|ref|YP_001373160.1| N-6 DNA methylase [Ochrobactrum anthropi ATCC 49188] gi|151563836|gb|ABS17331.1| N-6 DNA methylase [Ochrobactrum anthropi ATCC 49188] Length = 1702 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 41/141 (29%), Gaps = 11/141 (7%) Query: 64 EKANAAPIIVAYHFNSD----LARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHP 116 AY + D L + K + + G++ L Sbjct: 1313 MNVEKTRGFSAYRWIRDELIRLGVPASEIAYMQDYKKTEAKQRLFGDVRAGRVRFLLGSS 1372 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + G G+N Q L + W + +Q RI Q V ++ + ++ Sbjct: 1373 ETMGTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVR----QGNQHDEVDIFAYATEGSL 1428 Query: 177 DELVLQRLRTKSTIQDLLLNA 197 D + Q K+ L+ Sbjct: 1429 DASMWQNNERKARFIAAALSG 1449 >gi|325297578|ref|YP_004257495.1| helicase domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324317131|gb|ADY35022.1| helicase domain protein [Bacteroides salanitronis DSM 18170] Length = 1657 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 1/110 (0%) Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 + +T + N G++ +LF + G G+N Q + + W + + Sbjct: 1284 QFIQCAQTERARKKLFADMNSGRVRVLFGSTSMLGTGVNAQQRAVAVHHLEVPWRPADLE 1343 Query: 146 QMIERIGVTRQRQAG-FKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R V + + T+D LR K + + Sbjct: 1344 QRNGRAVRKGNTVKLWGGNVVDIVIYGTEKTLDAYKFNLLRNKQMFINQI 1393 >gi|260940072|ref|XP_002614336.1| hypothetical protein CLUG_05822 [Clavispora lusitaniae ATCC 42720] gi|238852230|gb|EEQ41694.1| hypothetical protein CLUG_05822 [Clavispora lusitaniae ATCC 42720] Length = 1704 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 56/188 (29%), Gaps = 15/188 (7%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + Y + E D+Q + + + Q+ + + + + L + Sbjct: 1446 QIYKQVDAETLQDIQRMKLSNSYGSKVDMIVKQVL--HLRGQDPNVQIVIFSQWRDLLVI 1503 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 + + A I S +A KD I+ + + Sbjct: 1504 LASAFDKAKITYVSAKGSHVAASTSKLSDPVEAFKDQNNIK-------TCFLLNAQAQAS 1556 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GL L +I + L E + R + G K+ V+ +NT++E ++ Sbjct: 1557 GLTLINATHIFLCEPLVNTPT------ELQAINRIHRIGQKKVTTVWMFAIENTVEENIV 1610 Query: 182 QRLRTKST 189 K Sbjct: 1611 ALGTRKRQ 1618 >gi|326955269|gb|AEA28964.1| helicase domain protein [Pseudonocardia dioxanivorans CB1190] Length = 2082 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 36/112 (32%), Gaps = 4/112 (3%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + + R + + G++ +L G G N+Q L W + Sbjct: 1639 RVRFIHEARNDREKAELFEACRNGEVAVLIGSTGKMGVGTNVQARAIALHHLDCPWRPAD 1698 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 Q R RQ + +Y + + + D Q + K++ ++ Sbjct: 1699 LAQRDGR----ALRQGNAYAEIGIYRYVTEGSFDAYSWQTVARKASFIAQVM 1746 >gi|116194552|ref|XP_001223088.1| hypothetical protein CHGG_03874 [Chaetomium globosum CBS 148.51] gi|88179787|gb|EAQ87255.1| hypothetical protein CHGG_03874 [Chaetomium globosum CBS 148.51] Length = 143 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 22/65 (33%), Gaps = 5/65 (7%) Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + G N + W+ +E + + G RAV + + + Sbjct: 82 LNHMKHGSKRPALSAANYVHIVEPQWNPS-----VEEQAIAGAVRMGQTRAVTIIRYVVK 136 Query: 174 NTIDE 178 N+++E Sbjct: 137 NSVEE 141 >gi|225465878|ref|XP_002266009.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1397 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 60/179 (33%), Gaps = 9/179 (5%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 ++ Y + +I+ + + Q A+ + + +I + Sbjct: 1181 RKSGYAMDEDSDIKDIDELVSLSE--QNNCNALLQQDYTRLNDETSHISPEKVLIFSQFL 1238 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 ++ + + + +K ++ L S GL+L + Sbjct: 1239 EHIHVIEQQLTVAGIKFSGMYSPMHSSNKMKSLSTFQHDADCMALLM-DGSAALGLDLSF 1297 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++ + +W + +E ++R + G R + V L + TI+E +L+ L+ Sbjct: 1298 VTHVFLMEPIWD------RSMEEQVISRAHRMGATRPIRVETLAMRGTIEEQMLEFLQD 1350 >gi|163846418|ref|YP_001634462.1| helicase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222524187|ref|YP_002568658.1| helicase domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163667707|gb|ABY34073.1| helicase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222448066|gb|ACM52332.1| helicase domain protein [Chloroflexus sp. Y-400-fl] Length = 957 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 37/103 (35%), Gaps = 4/103 (3%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ I + +L A G+NL N + + L W+ +Q R+ Sbjct: 524 EERRAVIAAAPLDRPRVLVAT-DCISEGINLHERYNAAIHYDLPWNPNRLEQREGRVDRY 582 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q+ V V Y N +D +V+ L K+ L A Sbjct: 583 GQQAPTV---VTVRYYGLNNEVDGVVIDVLLRKAREIRRALGA 622 >gi|44004463|ref|NP_982131.1| hypothetical protein BCE_A0124 [Bacillus cereus ATCC 10987] gi|42741529|gb|AAS44974.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] Length = 502 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T K ++E + ++ GL+L L+F+ L + L Sbjct: 228 TPPKRSAWLKEQVNSGVNVIICSQELVKVGLDLLAT-PTLIFYQLSFSLFTL-----NQA 281 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + +YL + T E + Q + K+ + + Sbjct: 282 ARRHWRIGQTKQCRTFYLGYRETFQEQMAQLIAQKNKAAEAM 323 >gi|134291641|ref|YP_001115410.1| helicase domain-containing protein [Burkholderia vietnamiensis G4] gi|134134830|gb|ABO59155.1| helicase domain protein [Burkholderia vietnamiensis G4] Length = 1155 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 36/117 (30%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWW 139 D + ++ +N P + + G++L ++ L W Sbjct: 984 DDDFAVQTLYGAIKPNRRVVLCAAFNSPLAPDILICTSIGSEGIDLHKECAEVIHHDLPW 1043 Query: 140 DLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + + +Q I R+ + V V + + + L ++ +LL Sbjct: 1044 NPAKLEQRIGRVDRVGSLAETSGQWVRVGIPFQEQSYERFQYSVLLARAQRFQVLLG 1100 >gi|83768649|dbj|BAE58786.1| unnamed protein product [Aspergillus oryzae] Length = 889 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 53/152 (34%), Gaps = 20/152 (13%) Query: 51 VHDEKIKALEVIIEKA---NAAPIIVAYHFNSDL----------ARLQKAFPQGRTLDKD 97 K++A+ ++ + +V F ++ + F G T D+ Sbjct: 675 KGSPKMRAMLPVLRDQVIVHGEKAMVWTQFPAEQIYVAAILKEANIDAEVFHAGLTRDER 734 Query: 98 PCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 ++ + + +L G+NLQ + ++ + + + R Sbjct: 735 MNLVERFTQKHDECMVLICAYNVNAAGMNLQNLCRNVHILTMGLS-----KSVVNQAIGR 789 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + G +R FVY +++ DE ++ R K Sbjct: 790 VSRLGQERMTFVYEYRLRSSFDEDLVSRSERK 821 >gi|325068189|ref|ZP_08126862.1| helicase domain protein [Actinomyces oris K20] Length = 798 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 16/119 (13%) Query: 91 GRTLDKDPCTIQEWNEGKI----PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + D+ +N +L A A+ G++LQ + LV F + ++ +Q Sbjct: 307 STSADEREDIRARFNADPAEEDMRVLVATDAAG-EGIDLQTYCHRLVNFDVPFNPSRLEQ 365 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTID------ELVLQRLRTKSTIQDLLLNALK 199 + RI + G + ++YL + + + L RL K + L A+ Sbjct: 366 RVGRID-----RYGQRETPTIFYLAPVASGEGLYAGHQDFLGRLAEKIATETRDLGAVN 419 >gi|57640956|ref|YP_183434.1| Hef nuclease [Thermococcus kodakarensis KOD1] gi|57159280|dbj|BAD85210.1| helicase-associated endonuclease for fork-structured DNA [Thermococcus kodakarensis KOD1] Length = 804 Score = 44.0 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 73/215 (33%), Gaps = 40/215 (18%) Query: 9 RELYCDLQGENIEAFNS-ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 R L+ + + + + ++ +Y + + K++ L+ ++++ Sbjct: 299 RAYLKKLKEDKRTKSSKELMEDPRMRKV----IYLLVQAKESGLDHPKMEKLKELVKEQL 354 Query: 68 AAPI----IVAYHFN------------------SDLARLQKAFPQGRTLDKDPCTIQEWN 105 IV ++ + + + +G + + + ++ Sbjct: 355 GKKPSSKIIVFTNYRDTGKKIVEELRSMGITAERFIGQASRKDDRGMSQREQKEVLDRFS 414 Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+ +L A + GL++ +++VF+ Q R G R + Sbjct: 415 RGEFNVLVAT-SVGEEGLDVPEV-DLVVFYEPVPSAIRSIQRRGRTGRHRPGR------- 465 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V L+A+ T DE R K + +A+KK Sbjct: 466 -VVILMAKGTRDEAYYWASRRKEK---GMFDAIKK 496 >gi|114321219|ref|YP_742902.1| DEAD/DEAH box helicase domain-containing protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227613|gb|ABI57412.1| DEAD/DEAH box helicase domain protein [Alkalilimnicola ehrlichii MLHE-1] Length = 438 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 20/181 (11%), Positives = 45/181 (24%), Gaps = 12/181 (6%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E I A K Q ++ + ++ I Sbjct: 207 AYEHLNDPEVVRIESEQITAD-------KVRQKLYHVSKDEKIPLLLGLIRQEEAMNRSI 259 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 I + K ++ + +G++ L A + Sbjct: 260 IFVNTKRAADRVTGYLLGNDIEAAVISGDIPQKKRESLLKRFQDGELRFLVATDVAARGL 319 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT---IDEL 179 + ++ + L D E++ I R A Y + I++ Sbjct: 320 HI--EDVSHVINYDLPQDPEDYVHRIGRTARAGASGDAISFACEEYVFSLPDIESFIEQR 377 Query: 180 V 180 + Sbjct: 378 I 378 >gi|302817901|ref|XP_002990625.1| hypothetical protein SELMODRAFT_450676 [Selaginella moellendorffii] gi|300141547|gb|EFJ08257.1| hypothetical protein SELMODRAFT_450676 [Selaginella moellendorffii] Length = 1228 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 47/165 (28%), Gaps = 26/165 (15%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS 79 I A K L Y +++K V + + K L II+ + Sbjct: 575 IRASGKLELMHKML----SHFYLNKKKTLIIVQNTRSKQLMNIIDD-----------YLK 619 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWN--EGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 +G ++ +N + L + N + + + Sbjct: 620 QQFGSYGRIERGMDAQVRQASLTRFNSQDSSCFALLLERGAATSIPNQLTAVDAVFIYDS 679 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 W+ + T + V VY L + T++E +L Sbjct: 680 DWNP-----WSD----TTCIRKLGLNNVTVYRLYSGLTVEEKILD 715 >gi|315231610|ref|YP_004072046.1| DNA/RNA helicase [Thermococcus barophilus MP] gi|315184638|gb|ADT84823.1| DNA/RNA helicase [Thermococcus barophilus MP] Length = 952 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 64/192 (33%), Gaps = 22/192 (11%) Query: 5 HKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++ +L + E + K ++ Y+ + + E + LE + Sbjct: 367 RQIEKLRGILELARKAQEKDSKIKNVAKLVK------YHLDRGEKIVIFTEYLDTLEYLK 420 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 I + G+ + + + + G GL Sbjct: 421 NNLPKYLGINETDIVTI---------SGKNKGDVHNIKERFEQENGAKILIATDVAGEGL 471 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NLQ N+L+ + W + +Q + RI + G K+ +VY + N +D VL+ Sbjct: 472 NLQ-VANVLINYEAPWSPIKLEQRMGRIW-----RLGQKKESYVYTVFLSNKMDRDVLEN 525 Query: 184 LRTKSTIQDLLL 195 L K D + Sbjct: 526 LYHKLMNIDKAM 537 >gi|146422514|ref|XP_001487194.1| hypothetical protein PGUG_00571 [Meyerozyma guilliermondii ATCC 6260] Length = 1263 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 6/75 (8%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L HGLN+ + F S + +E + R + G +AV V LI Sbjct: 1058 LIMDINLAAHGLNITA-ATHVYFTSP-----VWLRSVEAQAIKRAHRIGQTKAVRVETLI 1111 Query: 172 AQNTIDELVLQRLRT 186 +NT++E + ++ Sbjct: 1112 LKNTLEEEIYRKRSQ 1126 >gi|327409762|ref|YP_004347182.1| D6/D11-like helicase [Lausannevirus] gi|326784936|gb|AEA07070.1| D6/D11-like helicase [Lausannevirus] Length = 804 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 16/137 (11%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGK------IPLLFAHPASCGHGLNLQYGGNI 131 D F T ++ ++ +N K I ++ + L Sbjct: 406 TKDKKPKYALFTGSETKEERERVVRAFNRPKNVDGSVIQVMIGSKSIAEGVSLL--RVRQ 463 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQ--AGFKRAVFVYYLIAQNT-----IDELVL-QR 183 + +++ Q I R ++ +R V V+ A+ +D+ + + Sbjct: 464 VHIIDPFFNSSTIDQAIGRAVRFCSQKDLPEGERDVEVWLYRARGEHGRKLVDDKIYDEI 523 Query: 184 LRTKSTIQDLLLNALKK 200 + K + + L ALK+ Sbjct: 524 VEPKKVVAEGFLQALKE 540 >gi|322497195|emb|CBZ32268.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 958 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 6/96 (6%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + D + + + + ++ G+ + +C G++L VF Sbjct: 480 QWARDHCKRAVRIDGRVPVQQRGDLLHAFHRGEARIAVIGITACAVGISL-APAQCAVFC 538 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L D R R + G + V VYYL+ Sbjct: 539 ELPPDAA-----WMRQAEDRLHRPGQRDEVVVYYLL 569 >gi|241765453|ref|ZP_04763421.1| helicase domain protein [Acidovorax delafieldii 2AN] gi|241364792|gb|EER59776.1| helicase domain protein [Acidovorax delafieldii 2AN] Length = 384 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 6/115 (5%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 R + EG + LL + GLNLQ G ++ L W+ Sbjct: 209 NRSGFWRDGRFQRCDRNVLKKRVREGDLKLLLGT-DAASEGLNLQRLGTLINI-DLPWNP 266 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 +Q RI Q ++ +++ L ++++++ V Q L + L Sbjct: 267 TRLEQRKGRIQRIGQARS----EIWIANLRYRDSVEDRVHQVLADRLEAIHGLFG 317 >gi|146079608|ref|XP_001463808.1| SNF2/RAD54 related DNA helicase [Leishmania infantum JPCM5] gi|134067896|emb|CAM66177.1| putative SNF2/RAD54 related DNA helicase [Leishmania infantum JPCM5] Length = 958 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 6/96 (6%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + D + + + + ++ G+ + +C G++L VF Sbjct: 480 QWARDHCKRAVRIDGRVPVQQRGDLLHAFHRGEARIAVIGITACAVGISL-APAQCAVFC 538 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L D R R + G + V VYYL+ Sbjct: 539 ELPPDAA-----WMRQAEDRLHRPGQRDEVVVYYLL 569 >gi|87301587|ref|ZP_01084427.1| possible helicase [Synechococcus sp. WH 5701] gi|87283804|gb|EAQ75758.1| possible helicase [Synechococcus sp. WH 5701] Length = 538 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 25/198 (12%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + + +GE S + Q+ +V + ++++ Sbjct: 340 QRVENYRLRAARGEVRRDAESLAMLTALRQI----------GAAYKVPAAQALVTQLLV- 388 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----DPCTIQEWNEGKIPLLFAHPASC 119 A ++V F + RL + + ++ + G++PLL A A Sbjct: 389 --GGAAVVVFTAFVAPAERLAASLGGAVLTGRLKPPERQRQVERFQAGRVPLLVATFAVA 446 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G L + +V W + + R + G + ++L D+L Sbjct: 447 GLGFTLHR-ASHVVLLERPWTPGDTE-----QAEDRAHRIGMAGPLTAHWLQL-GVADQL 499 Query: 180 VLQRLRTKSTIQDLLLNA 197 V + +K+ L L Sbjct: 500 VDGLIASKAERIALALGG 517 >gi|134111228|ref|XP_775756.1| hypothetical protein CNBD4850 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258420|gb|EAL21109.1| hypothetical protein CNBD4850 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1656 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 52/184 (28%), Gaps = 18/184 (9%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQL----ANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 E D E E A+ + + + D + + IK L Sbjct: 1428 EAEEDTTPEEQEQLRRAADLERLRMMDVERRRAVMMMDMMGEYGSKINFLIKHLLYYKST 1487 Query: 66 ANAAPIIVAYHF-------NSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 ++ ++ L +F K + ++ + I + H Sbjct: 1488 EPDTRHVIFSNWSDSLNIVMQALRLNGISFASFDQGKKQKDVVDQFLRDESISVFLLHAE 1547 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 GL L +++ + E + R + G ++ V+ +T++ Sbjct: 1548 RESSGLTLTS-CHVVHLLEP-----VLRHSFELQAIGRVDRLGQEKETSVFCYATMDTVE 1601 Query: 178 ELVL 181 +L Sbjct: 1602 SRIL 1605 >gi|153817056|ref|ZP_01969723.1| helicase conserved C- domain protein [Vibrio cholerae NCTC 8457] gi|126512466|gb|EAZ75060.1| helicase conserved C- domain protein [Vibrio cholerae NCTC 8457] Length = 4732 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 8/115 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K G++ +L G G N+Q L W + +Q Sbjct: 2979 FIHDYNTTLKKEALFDRVRRGEVRVLIGSSMKMGAGTNVQNRLVALHHMDAPWRPSDMEQ 3038 Query: 147 MIERIGVTRQ--------RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI V + Q + D ++ Q L K+ + Sbjct: 3039 REGRIVRQGNEFYQRAANAGKPEDFEVELIAYTTQGSSDPVMWQILERKAGAIEQ 3093 >gi|261212877|ref|ZP_05927161.1| DNA methylase [Vibrio sp. RC341] gi|260837942|gb|EEX64619.1| DNA methylase [Vibrio sp. RC341] Length = 4620 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 8/115 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K G++ +L G G N+Q L W + +Q Sbjct: 2871 FIHDYNTTLKKEALFDRVRRGEVRVLIGSSMKMGAGTNVQNRLVALHHMDAPWRPSDMEQ 2930 Query: 147 MIERIGVTRQ--------RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI V + Q + D ++ Q L K+ + Sbjct: 2931 REGRIVRQGNEFYQRAANAGKPEDFEVELIAYTTQGSSDPVMWQILERKAGAIEQ 2985 >gi|152973179|ref|YP_001338325.1| putative ATP-dependent helicase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150958028|gb|ABR80058.1| putative ATP-dependent helicase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 1046 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 27/226 (11%), Positives = 69/226 (30%), Gaps = 52/226 (23%) Query: 14 DLQGENIEAFNSAS-----KTVKCLQLANGAVYYDEEKHWKEVHDEK--IKALEVIIEKA 66 +++ EA A+ T + Q+ + + + + + + + ++ Sbjct: 457 EIENAQSEAVEEATHYTQPLTNEQKQILDVLRQWAQVAKNQVDSKARAILDWINTNLKTN 516 Query: 67 NAAPIIVAYHFNSDLARLQKAF----------------PQGRTLDKDPCTIQEWN----E 106 N F Q ++ + Sbjct: 517 NQWNEYRVILFTEYRTTHQWMHEILASHGLAGERLAVLHGSMPQEEREKVKAAFQTSPKA 576 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 + +L A + G++LQ N L+ + ++ +Q RI QRQ + V Sbjct: 577 SAVRILLAT-DAASEGIDLQNYCNYLIHLEIPYNPNVMEQRNGRIDRHGQRQ----KEVV 631 Query: 167 VYYLIAQNTID----------ELVLQRLRTKSTIQDLLLNALKKET 202 +++ + + +D + +L+ LR L +++ + Sbjct: 632 IWHPV--DGVDKVNTRIGGHGDDILRALRK--------LESMRADM 667 >gi|153216704|ref|ZP_01950579.1| helicase conserved C- domain protein [Vibrio cholerae 1587] gi|124114154|gb|EAY32974.1| helicase conserved C- domain protein [Vibrio cholerae 1587] Length = 4231 Score = 44.0 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 8/115 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K G++ +L G G N+Q L W + +Q Sbjct: 2979 FIHDYNTTLKKEALFDRVRRGEVRVLIGSSMKMGAGTNVQNRLVALHHMDAPWRPSDMEQ 3038 Query: 147 MIERIGVTRQ--------RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI V + Q + D ++ Q L K+ + Sbjct: 3039 REGRIVRQGNEFYQRAANAGKPEDFEVELIAYTTQGSSDPVMWQILERKAGAIEQ 3093 >gi|330947467|gb|EGH48088.1| SNF2-related:helicase [Pseudomonas syringae pv. pisi str. 1704B] Length = 133 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 26/86 (30%), Gaps = 7/86 (8%) Query: 91 GRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + K I + + ++ G G NL N + F L W Sbjct: 54 SDSPKKRQKAIDAFQQDQDCRIFIGTRSAAGTGYNLTA-ANYVFFLGLPWTPGLQD---- 108 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNT 175 R + G R V V +A +T Sbjct: 109 -QAEDRAYRNGQLRMVVVKIPLADDT 133 >gi|153800504|ref|ZP_01955090.1| helicase conserved C- domain protein [Vibrio cholerae MZO-3] gi|124123948|gb|EAY42691.1| helicase conserved C- domain protein [Vibrio cholerae MZO-3] Length = 4610 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 8/115 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K G++ +L G G N+Q L W + +Q Sbjct: 2857 FIHDYNTTLKKEALFDRVRRGEVRVLIGSSMKMGAGTNVQNRLVALHHMDAPWRPSDMEQ 2916 Query: 147 MIERIGVTRQ--------RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI V + Q + D ++ Q L K+ + Sbjct: 2917 REGRIVRQGNEFYQRAANAGKPEDFEVELIAYTTQGSSDPVMWQILERKAGAIEQ 2971 >gi|67920660|ref|ZP_00514180.1| SNF2-related:Helicase, C-terminal [Crocosphaera watsonii WH 8501] gi|67858144|gb|EAM53383.1| SNF2-related:Helicase, C-terminal [Crocosphaera watsonii WH 8501] Length = 959 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 11/99 (11%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I+E+ + K L L G+NL + + L+ F + W L QQ RI Q Sbjct: 496 EVIEEFGDEKSKLRLLIATDVASEGINLHFLCHRLIHFDIPWSLMALQQRNGRIDRYGQE 555 Query: 158 QAGFKRAVFVYYLIAQNT---IDE--LVLQRLRTKSTIQ 191 Q + YL+ + +DE +++ L K Sbjct: 556 QQPQ-----IRYLLTRCQNAQMDEAERIIRVLIKKDEQA 589 >gi|328708028|ref|XP_003243578.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like [Acyrthosiphon pisum] Length = 706 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 7/79 (8%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 N I + + + L L + F D Q+++ I ++ Sbjct: 602 NFQNSENITTILINYNIGLNNLKL-NFATRVFFMEPIMDKSFENQIVDNI------RSKQ 654 Query: 162 KRAVFVYYLIAQNTIDELV 180 + +V++ I +++I+E + Sbjct: 655 TKPTYVHHFIIKDSIEEKI 673 >gi|50311213|ref|XP_455630.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644766|emb|CAG98338.1| KLLA0F12166p [Kluyveromyces lactis] Length = 1528 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 32/85 (37%), Gaps = 6/85 (7%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + L + S GL L ++++ + E ++R Sbjct: 1389 KAVDTFRKDPNCTCLLLNVHSQSTGLTLVNARHLILLEPIMDSST------EAQAISRIH 1442 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQ 182 + G K +V+ + +NT++E +++ Sbjct: 1443 RIGQKDVTYVWNFMVRNTVEESIMK 1467 >gi|260789510|ref|XP_002589789.1| hypothetical protein BRAFLDRAFT_90470 [Branchiostoma floridae] gi|229274972|gb|EEN45800.1| hypothetical protein BRAFLDRAFT_90470 [Branchiostoma floridae] Length = 987 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 14/134 (10%), Positives = 44/134 (32%), Gaps = 14/134 (10%) Query: 51 VHDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDP 98 + K + L+ ++ + +++ L ++ + + + + Sbjct: 855 LDSGKFRLLDRLLPEMAERGDRVLLFSQLTMMLDIVEPYLKRRKYKYVRLDGQTPVTERL 914 Query: 99 CTIQEWNEG-KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 I ++N I + + G G+NL N ++ + ++ +Q +R Q Sbjct: 915 QLIDQYNNNTDIFIFLLSTRAGGLGINLTS-ANTVILHDIDFNPYNDKQAEDRCHRVGQT 973 Query: 158 QAGFKRAVFVYYLI 171 + + + Sbjct: 974 KYDGCKIALYTVFL 987 >gi|296157098|ref|ZP_06839934.1| DEAD-like helicase [Burkholderia sp. Ch1-1] gi|295892434|gb|EFG72216.1| DEAD-like helicase [Burkholderia sp. Ch1-1] Length = 761 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 639 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 692 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL T L + K + + + + V Sbjct: 693 SWRIGQKQPVKVIYLGYAATSQMTCLTLMAKKIMVSQSTSGDVPESGLDV 742 >gi|111219743|ref|YP_710537.1| hypothetical protein FRAAL0248 [Frankia alni ACN14a] gi|111147275|emb|CAJ58925.1| conserved hypothetical protein; putative ATP dependent helicase domain [Frankia alni ACN14a] Length = 1159 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 45/120 (37%), Gaps = 18/120 (15%) Query: 93 TLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 D+ + + +L A + G++LQ + LV + + ++ + +Q I Sbjct: 643 PTDEREQLRLAFQADPSEHPVRILLAT-DAASEGIDLQNHCHRLVNYDIPFNPNKLEQRI 701 Query: 149 ERIGVTRQRQAGFKRAVFVYYLI------AQNTIDELV--LQRLRTKSTIQDLLLNALKK 200 RI QRQ+ + + + A ++ + + L R+ K L ++ Sbjct: 702 GRIDRYGQRQSP-----EIRHFVGSGWTGAVDSYEADLEFLSRVVKKVAQMKADLGSVNA 756 >gi|58266262|ref|XP_570287.1| hypothetical protein CND01470 [Cryptococcus neoformans var. neoformans JEC21] gi|57226520|gb|AAW42980.1| hypothetical protein CND01470 [Cryptococcus neoformans var. neoformans JEC21] Length = 1586 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 22/184 (11%), Positives = 50/184 (27%), Gaps = 18/184 (9%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--- 66 E D E E A+ + + + KI L + Sbjct: 1358 EAEEDTTPEEQEQLRRAADLERLRMMDVERRRAVMMMDMMGEYGSKINFLIKHLLYYKST 1417 Query: 67 -NAAPIIVAYHF-------NSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 ++ ++ L +F K + ++ + I + H Sbjct: 1418 EPDTRHVIFSNWSDSLNIVMQALRLNGISFASFDQGKKQKDVVDQFLRDESISVFLLHAE 1477 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 GL L +++ + E + R + G ++ V+ +T++ Sbjct: 1478 RESSGLTLTS-CHVVHLLEP-----VLRHSFELQAIGRVDRLGQEKETSVFCYATMDTVE 1531 Query: 178 ELVL 181 +L Sbjct: 1532 SRIL 1535 >gi|262402926|ref|ZP_06079486.1| DNA methylase [Vibrio sp. RC586] gi|262350425|gb|EEY99558.1| DNA methylase [Vibrio sp. RC586] Length = 4236 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 8/115 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K G++ +L G G N+Q L W + +Q Sbjct: 2483 FIHDYNTTLKKEALFDRVRRGEVRVLIGSSMKMGAGTNVQNRLVALHHMDAPWRPSDMEQ 2542 Query: 147 MIERIGVTRQ--------RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI V + Q + D ++ Q L K+ + Sbjct: 2543 REGRIVRQGNEFYQRAANAGKPEDFEVELIAYTTQGSSDPVMWQILERKAGAIEQ 2597 >gi|255577062|ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|223531092|gb|EEF32941.1| mom(plant), putative [Ricinus communis] Length = 1982 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 21/202 (10%), Positives = 50/202 (24%), Gaps = 47/202 (23%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR--------- 83 + + D D K+ + I KA+ ++ R Sbjct: 459 RKCCDHPYLMDPSPEDILTKDAKVVDILDIGIKASGKLQLLQAMLIEIRNRGSRVIVLFQ 518 Query: 84 ----------------------------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 + + + +N K +F Sbjct: 519 VYALHRNSWKDKIGDILDDFVRQRFGQDSYERIDGCVNQKRKQAALNNFNNQKTRFVFLL 578 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + + ++ F W + + +I + + V+ L + T Sbjct: 579 ESCACLPSIKLSSVDTVIIFGSDWIPANDLRNLRKITLD-----SQFEQLKVFRLYSSFT 633 Query: 176 IDELVLQRLRTKSTIQDLLLNA 197 ++E VL + D +L++ Sbjct: 634 VEENVLILAKH-----DKILDS 650 >gi|229526604|ref|ZP_04416008.1| helicase Snf2 family [Vibrio cholerae bv. albensis VL426] gi|229336762|gb|EEO01780.1| helicase Snf2 family [Vibrio cholerae bv. albensis VL426] Length = 1032 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 31/115 (26%), Gaps = 8/115 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T K G++ +L G G N+Q L W + +Q Sbjct: 863 FIHDYNTTLKKEALFDRVRRGEVRVLIGSSMKMGAGTNVQNRLVALHHMDAPWRPSDMEQ 922 Query: 147 MIERIGVTRQ--------RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI V + Q + D ++ Q L K+ + Sbjct: 923 REGRIVRQGNEFYQRAANAGKPEDFEVELIAYTTQGSSDPVMWQILERKAGAIEQ 977 >gi|221064761|ref|ZP_03540866.1| DEAD-like helicase [Comamonas testosteroni KF-1] gi|220709784|gb|EED65152.1| DEAD-like helicase [Comamonas testosteroni KF-1] Length = 759 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K +V V YL + L+ + K + + + + V Sbjct: 691 SWRIGQKLSVRVMYLGYAGSSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|256271747|gb|EEU06784.1| Irc20p [Saccharomyces cerevisiae JAY291] Length = 1556 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 6/102 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L ++ T + + + L + + G GLNL + + Sbjct: 1401 LYHIEHLACLSNTANVGETINNFKRQPSVTCLLLNVKTLGAGLNL-INAKHIFLLDPILN 1459 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + R + G FV+ + +NT++E +L+ Sbjct: 1460 NSDEL-----QAMGRNNRIGQDEETFVWNFMIRNTVEENILR 1496 >gi|118576367|ref|YP_876110.1| ERCC4-like helicase [Cenarchaeum symbiosum A] gi|118194888|gb|ABK77806.1| ERCC4-like helicase [Cenarchaeum symbiosum A] Length = 558 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 10/110 (9%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G K T+ ++ +G +L GL++ N++VF+ + Q R Sbjct: 438 GLKQKKQVETVAKFRDGGYDVLV-STRVGEEGLDI-SEVNLVVFYDNVPSSIRYVQRRGR 495 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G + L+A+ TIDE R K T + + + K Sbjct: 496 TGRKDAGKL--------VVLMAKGTIDEAYYWIGRRKITAARGMGDRMNK 537 >gi|222109151|ref|YP_002551416.1| helicase SNF2 family [Agrobacterium vitis S4] gi|221738425|gb|ACM39290.1| helicase SNF2 family [Agrobacterium vitis S4] Length = 1701 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 55/193 (28%), Gaps = 16/193 (8%) Query: 17 GENIEAFNSASKTV----KCLQLANGAVYYDEEKHWKEVHDEKIKALEVI-IEKANAAPI 71 + E N + V + Q + Y + E+ + + Sbjct: 1259 DNDNEPDNKLNLLVENAFRLWQDTSQNTYLKPDGKPYELPGAAQMIFSDLGTINVEKSRG 1318 Query: 72 IVAYHFNSD----LARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASCGHGLN 124 AY + D + + K + + GK+ L + G G+N Sbjct: 1319 FSAYRWIRDELIRMGVPPAEIAYMQDYKKTEAKQRLFGDVRAGKVRFLIGSSETMGTGVN 1378 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 Q L + W + +Q RI Q V ++ Q ++D + Q Sbjct: 1379 AQLRLKALHHLDVPWLPSQIEQREGRIVR----QGNQHDEVDIFAYATQGSLDASMWQNN 1434 Query: 185 RTKSTIQDLLLNA 197 K+ L+ Sbjct: 1435 ERKARFIAAALSG 1447 >gi|326427519|gb|EGD73089.1| hypothetical protein PTSG_04803 [Salpingoeca sp. ATCC 50818] Length = 1649 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 41/144 (28%), Gaps = 22/144 (15%) Query: 49 KEVHDEKIKALEVIIEKA------NAAPIIVAYHFNSDLARLQK---------AFPQGRT 93 + H K+ + + + + +++ F+ L ++ T Sbjct: 1473 EGGHSSKVCEVLRALRRVFSKPTGHWNKVVIFSQFSDMLRLIRIGARENDIRVFEAYEST 1532 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K + + L S GLN+ + Q V Sbjct: 1533 QFKR-ALDEFKKATEHCALLLDIKSGSQGLNILE-AQHVFLLEPILHPGVEQ-----QAV 1585 Query: 154 TRQRQAGFKRAVFVYYLIAQNTID 177 R + G K V++ I ++I+ Sbjct: 1586 ARVHRIGQKHPTCVHHFIVTDSIE 1609 >gi|190405309|gb|EDV08576.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] Length = 1556 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 6/102 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L ++ T + + + L + + G GLNL + + Sbjct: 1401 LYHIEHLACLSNTANVGETINNFKRQPSVTCLLLNVKTLGAGLNL-INAKHIFLLDPILN 1459 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + R + G FV+ + +NT++E +L+ Sbjct: 1460 NSDEL-----QAMGRNNRIGQDEETFVWNFMIRNTVEENILR 1496 >gi|147863931|emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera] Length = 1208 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 60/179 (33%), Gaps = 9/179 (5%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 ++ Y + +I+ + + Q A+ + + +I + Sbjct: 992 RKSGYAMDEDSDIKDIDELVSLSE--QNNCNALLQQDYTRLNDETSHISPEKVLIFSQFL 1049 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 ++ + + + +K ++ L S GL+L + Sbjct: 1050 EHIHVIEQQLTVAGIKFSGMYSPMHSSNKMKSLSTFQHDADCMALLM-DGSAALGLDLSF 1108 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++ + +W + +E ++R + G R + V L + TI+E +L+ L+ Sbjct: 1109 VTHVFLMEPIWD------RSMEEQVISRAHRMGATRPIRVETLAMRGTIEEQMLEFLQD 1161 >gi|6323276|ref|NP_013348.1| Irc20p [Saccharomyces cerevisiae S288c] gi|74676414|sp|Q06554|IRC20_YEAST RecName: Full=Uncharacterized ATP-dependent helicase IRC20; AltName: Full=Increased recombination centers protein 20 gi|662344|gb|AAB67400.1| Ylr247cp [Saccharomyces cerevisiae] gi|285813665|tpg|DAA09561.1| TPA: Irc20p [Saccharomyces cerevisiae S288c] Length = 1556 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 6/102 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L ++ T + + + L + + G GLNL + + Sbjct: 1401 LYHIEHLACLSNTANVGETINNFKRQPSVTCLLLNVKTLGAGLNL-INAKHIFLLDPILN 1459 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + R + G FV+ + +NT++E +L+ Sbjct: 1460 NSDEL-----QAMGRNNRIGQDEETFVWNFMIRNTVEENILR 1496 >gi|83646526|ref|YP_434961.1| SNF2 family DNA/RNA helicase [Hahella chejuensis KCTC 2396] gi|83634569|gb|ABC30536.1| Superfamily II DNA/RNA helicase, SNF2 family [Hahella chejuensis KCTC 2396] Length = 947 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 17/171 (9%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDL------------ARLQ 85 + KH K +D K++ L+ II+ ++ + + R Sbjct: 450 RLIERAKHLKSGNDPKLQTLKQIIKPVLDEGYNPVIFCRYIATAEYLADELNSAFPQREV 509 Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 T + I++ E L G+NLQ N ++ + L W+ H+ Sbjct: 510 IHVTGDLTPTERLERIEQLKESDKAPLLVATDCLSEGVNLQEQFNAVIHYDLSWNPTRHE 569 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q R+ Q+ K + Y +N +D VLQ + K+ L Sbjct: 570 QREGRVDRFGQKAKNVK---ALMYYGEENPVDGAVLQVILRKAESIRKALG 617 >gi|255025985|ref|ZP_05297971.1| hypothetical protein LmonocytFSL_05850 [Listeria monocytogenes FSL J2-003] Length = 907 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 5/83 (6%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 K Q +L E + + Q+ + E + K+ L I+ Sbjct: 828 EKIQADLEASNGNAGEERIKLLAGLTRLRQICCDPSLFVENYQGE---SGKLLQLFDTIQ 884 Query: 65 --KANAAPIIVAYHFNSDLARLQ 85 + N I++ F L ++ Sbjct: 885 TARENGKRILLFSQFTGMLGIIR 907 >gi|151941083|gb|EDN59463.1| conserved protein [Saccharomyces cerevisiae YJM789] Length = 1556 Score = 43.6 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 6/102 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L ++ T + + + L + + G GLNL + + Sbjct: 1401 LYHIEHLACLSNTANVGETINNFKRQPSVTCLLLNVKTLGAGLNL-INAKHIFLLDPILN 1459 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + R + G FV+ + +NT++E +L+ Sbjct: 1460 NSDEL-----QAMGRNNRIGQDEETFVWNFMIRNTVEENILR 1496 >gi|312115548|ref|YP_004013144.1| DEAD-like helicase [Rhodomicrobium vannielii ATCC 17100] gi|311220677|gb|ADP72045.1| DEAD-like helicase [Rhodomicrobium vannielii ATCC 17100] Length = 1713 Score = 43.6 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 4/108 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + K E ++ +L A G G N+Q + W + +Q Sbjct: 1298 FIHEADNDIKKARLFAAVREAQVRILIGSTAKMGVGTNVQRQLVAMHHLDAPWRPADVEQ 1357 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 RI Q V + + ++D Q L K+ L Sbjct: 1358 RDGRILR----QGNLNSEVEIIRYVTLRSLDAYRWQTLTRKANFIAQL 1401 >gi|259148229|emb|CAY81476.1| Irc20p [Saccharomyces cerevisiae EC1118] Length = 1556 Score = 43.6 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 6/102 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L ++ T + + + L + + G GLNL + + Sbjct: 1401 LYHIEHLACLSNTANVGETINNFKRQPSVTCLLLNVKTLGAGLNL-INAKHIFLLDPILN 1459 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + R + G FV+ + +NT++E +L+ Sbjct: 1460 NSDEL-----QAMGRNNRIGQDEETFVWNFMIRNTVEENILR 1496 >gi|207342903|gb|EDZ70527.1| YLR247Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1556 Score = 43.6 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 6/102 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L ++ T + + + L + + G GLNL + + Sbjct: 1401 LYHIEHLACLSNTANVGETINNFKRQPSVTCLLLNVKTLGAGLNL-INAKHIFLLDPILN 1459 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + + R + G FV+ + +NT++E +L+ Sbjct: 1460 NSDEL-----QAMGRNNRIGQDEETFVWNFMIRNTVEENILR 1496 >gi|254442024|ref|ZP_05055500.1| Helicase conserved C-terminal domain protein [Verrucomicrobiae bacterium DG1235] gi|198256332|gb|EDY80640.1| Helicase conserved C-terminal domain protein [Verrucomicrobiae bacterium DG1235] Length = 959 Score = 43.6 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 53/177 (29%), Gaps = 25/177 (14%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF---------- 77 + K Q ++ ++ + + + N +V + Sbjct: 444 ELRKLRQFERELTDLQGVENDYKLEAAHMVITDWL---ENGYSPVVFCRYIPTANYVGEQ 500 Query: 78 ------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 + + + I+ K +L A G+NL + Sbjct: 501 LKPILEKAFKDITVQVVTSEDPDELRRERIEAMGSSKRRVLIAT-DCLSEGINLHAHFSA 559 Query: 132 LVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTK 187 ++ + L W+ +Q R+ Q + V Y L +++ +D +VL + K Sbjct: 560 VLHYDLPWNPNRLEQREGRVDRFGQTR----DEVKAYLLFSKDNPVDGVVLNVILRK 612 >gi|297849100|ref|XP_002892431.1| hypothetical protein ARALYDRAFT_470861 [Arabidopsis lyrata subsp. lyrata] gi|297338273|gb|EFH68690.1| hypothetical protein ARALYDRAFT_470861 [Arabidopsis lyrata subsp. lyrata] Length = 2034 Score = 43.6 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 55/193 (28%), Gaps = 30/193 (15%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYH------------- 76 QL + + + K++ L+ ++ N +V Y Sbjct: 563 LKQLLTKNLELHKILDVEVKASGKLQLLDEMLTHIKKNGLKAVVFYQAAQTPEGLLLGNI 622 Query: 77 ---FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILV 133 F + G K E + +L +C + L + + Sbjct: 623 LEDFVGHRFGPKSYEH-GIYSSKKNAINNFNKESQCCVLLLETRACSQTIKLLR-AEVFI 680 Query: 134 FFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL--VLQRLRTKSTIQ 191 F + + +E+I + + ++ L + T++E +L R + Sbjct: 681 LFGSSLNPSHDVKHLEKIKIESCSER-----TKIFRLYSVCTVEEKALILARQNKR---H 732 Query: 192 DLLLNALKKETIH 204 + L + H Sbjct: 733 HKAVENLSRSLTH 745 >gi|91784931|ref|YP_560137.1| hypothetical protein Bxe_A0849 [Burkholderia xenovorans LB400] gi|91688885|gb|ABE32085.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 1062 Score = 43.6 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 17/158 (10%), Positives = 40/158 (25%), Gaps = 7/158 (4%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 E L N A ++A Q + + I + Sbjct: 795 QALLDEYAHILFESNGLADHAA-------QDGCETLADAMYEAMSLRSAPLQPDELQIRD 847 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + + R + + + +N P + A + GL+ Sbjct: 848 EQLSIKPFETRVRTHFALRFGNQRGEDGAVARRKVVQAAFNSPFWPFVLASTSVGQEGLD 907 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + +V ++L + + +Q R+ + Sbjct: 908 FHNWCHSVVHWNLPSNPVDMEQREGRVHRYKGYAVRKN 945 >gi|319892532|ref|YP_004149407.1| hypothetical protein SPSINT_1243 [Staphylococcus pseudintermedius HKU10-03] gi|317162228|gb|ADV05771.1| hypothetical protein SPSINT_1243 [Staphylococcus pseudintermedius HKU10-03] Length = 383 Score = 43.6 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 18/190 (9%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH 76 E E +N + ++ +G + + + + + K + I I+ + Sbjct: 201 DETSEKYNVLKE-EFLQKIKDGELLLNTLVNMQYLMFTDEKRCKEIAASLKGQQIVYCCY 259 Query: 77 FNSDLARLQKAFPQGRT--LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + T D ++ + P L G NLQ+ N + F Sbjct: 260 LKEVEQISKHCDCYVITGDTDNRSEVLKRFKGDDKP-LIMTYGVGSFGHNLQF-CNRITF 317 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF----VYYLIAQNTIDELVLQRLRTKSTI 190 S+ +D + +Q + RI Q + R + +Y L + L KS + Sbjct: 318 ASITFDYAKVEQAMYRIKRLGQERIIHYRYIRSDLGIYNL---------MYDNLTKKSNL 368 Query: 191 QDLLLNALKK 200 DL++ L+K Sbjct: 369 HDLIIRDLEK 378 >gi|329765288|ref|ZP_08256868.1| DEAD/DEAH box helicase domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138194|gb|EGG42450.1| DEAD/DEAH box helicase domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 505 Score = 43.6 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 26/177 (14%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA---------------R 83 A++ ++ K + KI L+ IIE ++ + + Sbjct: 321 AIHLAKDAQSKGIEHSKILKLKEIIESVPG-KALIFTSYRDSVDVIFNKLTEMGISAAIL 379 Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + K+ G K T+Q + +G +L A GL++ N ++F+ Sbjct: 380 IGKSGDTGLKQKKQIETVQNFRDGLFRVLVAT-RVGEEGLDI-SEVNQVIFYDNVPSSIR 437 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 Q R+ + G K + LIA+NTIDE + K T + + K Sbjct: 438 FVQ--------RRGRTGRKDTGKLVVLIAKNTIDETYYWIGKRKMTAAKSMGEKMTK 486 >gi|3599385|gb|AAC62691.1| ATP-dependent RNA helicase [Cenarchaeum symbiosum] Length = 503 Score = 43.6 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 10/110 (9%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G K T+ ++ +G +L GL++ N++VF+ + Q R Sbjct: 383 GLKQKKQVETVAKFRDGGYDVLV-STRVGEEGLDI-SEVNLVVFYDNVPSSIRYVQRRGR 440 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G + L+A+ TIDE R K T + + + K Sbjct: 441 TGRKDAGKL--------VVLMAKGTIDEAYYWIGRRKITAARGMGDRMNK 482 >gi|296090335|emb|CBI40154.3| unnamed protein product [Vitis vinifera] Length = 1146 Score = 43.6 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 60/179 (33%), Gaps = 9/179 (5%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 ++ Y + +I+ + + Q A+ + + +I + Sbjct: 939 RKSGYAMDEDSDIKDIDELVSLSE--QNNCNALLQQDYTRLNDETSHISPEKVLIFSQFL 996 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 ++ + + + +K ++ L S GL+L + Sbjct: 997 EHIHVIEQQLTVAGIKFSGMYSPMHSSNKMKSLSTFQHDADCMALLM-DGSAALGLDLSF 1055 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 ++ + +W + +E ++R + G R + V L + TI+E +L+ L+ Sbjct: 1056 VTHVFLMEPIWD------RSMEEQVISRAHRMGATRPIRVETLAMRGTIEEQMLEFLQD 1108 >gi|254500027|ref|ZP_05112180.1| N-6 DNA Methylase family [Labrenzia alexandrii DFL-11] gi|222441494|gb|EEE48171.1| N-6 DNA Methylase family [Labrenzia alexandrii DFL-11] Length = 1702 Score = 43.6 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 57/198 (28%), Gaps = 26/198 (13%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHD----------EKIKALEVIIEKA 66 GE E N +K + N + E + ++ ++ Sbjct: 1262 GEENEPDNKLNKL-----IENSFRIWKETGDNTYLTREGKTFDLPGAAQMIFSDLGTINV 1316 Query: 67 NAAPIIVAYHFNSDLARLQ----KAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASC 119 AY + D + + K + + N GK+ L + Sbjct: 1317 EKTRGFSAYRWIRDELIRRGVPASEIAFMQDYKKTEAKQRLFADVNAGKVRFLIGSSETM 1376 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+N Q L + W + +Q RI Q + ++ + ++D Sbjct: 1377 GTGVNAQLRLKALHHLDVPWLPSQIEQREGRIER----QGNQHDEIDIFAYATEGSMDAQ 1432 Query: 180 VLQRLRTKSTIQDLLLNA 197 + Q K+ L+ Sbjct: 1433 MWQNNERKARFIAAALSG 1450 >gi|10954739|ref|NP_066674.1| hypothetical protein pRi1724_p094 [Agrobacterium rhizogenes] gi|10567403|dbj|BAB16212.1| riorf93 [Agrobacterium rhizogenes] Length = 1693 Score = 43.6 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 41/138 (29%), Gaps = 11/138 (7%) Query: 67 NAAPIIVAYHFNSD----LARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASC 119 AY + D L + K + + G++ L + Sbjct: 1307 EKTRGFSAYRWIRDELVRLGVPPSQIAFMQDYKKTEAKQRLFADVRAGRVRFLIGSSETM 1366 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+N Q L + W +Q RI Q AV ++ + ++D Sbjct: 1367 GTGVNAQARLKALHHLDVPWLPSHIEQREGRIVR----QGNQHDAVDIFAYATEGSLDAS 1422 Query: 180 VLQRLRTKSTIQDLLLNA 197 + Q K+ L+ Sbjct: 1423 MWQNNERKARFIAAALSG 1440 >gi|262191610|ref|ZP_06049789.1| DNA methylase [Vibrio cholerae CT 5369-93] gi|262032498|gb|EEY51057.1| DNA methylase [Vibrio cholerae CT 5369-93] Length = 4238 Score = 43.6 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 33/115 (28%), Gaps = 8/115 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + ++ G++ +L G G N+Q L W + +Q Sbjct: 2485 FIHDANTTKQKEALFEQVRNGEVRVLIGSSMKMGAGTNVQNRLVALHHMDAPWRPSDMEQ 2544 Query: 147 MIERIGVTRQ--------RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 RI V + Q + D ++ Q L K+ + Sbjct: 2545 REGRIVRQGNEFYQRAANAGKPEDFEVELIAYTTQGSSDPVMWQILERKAGAIEQ 2599 >gi|262118169|ref|YP_003275939.1| helicase domain protein [Gordonia bronchialis DSM 43247] gi|262088079|gb|ACY24046.1| helicase domain protein [Gordonia bronchialis DSM 43247] Length = 1956 Score = 43.6 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 4/101 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + R+ + ++ GKI +L + G G+N+Q L + W + +Q Sbjct: 1436 FIHEARSPQQKLALQEDARTGKIAVLIGSTKTMGTGMNVQDRMIALHHMDVPWRPADLEQ 1495 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 RI Q + + + + T D ++ Q++ K Sbjct: 1496 REGRIIR----QGNQNPRIEICGYVTEGTTDTVMWQKVERK 1532 >gi|316932252|ref|YP_004107234.1| helicase domain-containing protein [Rhodopseudomonas palustris DX-1] gi|315599966|gb|ADU42501.1| helicase domain protein [Rhodopseudomonas palustris DX-1] Length = 921 Score = 43.6 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 9/102 (8%) Query: 93 TLDKDPCTIQEW----NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 T D+ + + E + + G+NLQ + +V + L W+ HQQ Sbjct: 496 TPDERRDRVADMAPADEEKPVQRILVATDCLSEGINLQQLFDTVVHYDLSWNPTRHQQRE 555 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKST 189 R+ Q V + + ++ ID VL + K+ Sbjct: 556 GRVDRFGQPAEL----VRSIMMFSPDSAIDGAVLDVILRKAE 593 >gi|156847230|ref|XP_001646500.1| hypothetical protein Kpol_1048p73 [Vanderwaltozyma polyspora DSM 70294] gi|156117177|gb|EDO18642.1| hypothetical protein Kpol_1048p73 [Vanderwaltozyma polyspora DSM 70294] Length = 1549 Score = 43.6 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 33/93 (35%), Gaps = 9/93 (9%) Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + L + + G GLNL + + + +R + Sbjct: 1416 IEKFKEDYSYTCLLLNVKTLGAGLNLLN-ARHIFLLDPIINNNDEL-----QAKSRNNRI 1469 Query: 160 GFKRAVFVYYLIAQNTIDELVLQ---RLRTKST 189 G + FV+ + +N+++E +++ L K Sbjct: 1470 GQTKTTFVWNFMIRNSVEENIMRYKCMLDGKRK 1502 >gi|254565729|ref|XP_002489975.1| hypothetical protein [Pichia pastoris GS115] gi|238029771|emb|CAY67694.1| Hypothetical protein PAS_chr1-1_0318 [Pichia pastoris GS115] gi|328350386|emb|CCA36786.1| hypothetical protein PP7435_Chr1-0638 [Pichia pastoris CBS 7435] Length = 1169 Score = 43.2 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 6/99 (6%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 + +++ ++ L HG L V+F + Sbjct: 945 YFMYASYKKPIERAENLVKFTEIESGAALIMDLKLASHG--LTIIAATRVYF---INP-V 998 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 ++ +E + R + G ++ V V LI + TI+E +LQ Sbjct: 999 WRRDLEAQAIKRAHRIGQQKEVKVETLILRGTIEEEMLQ 1037 >gi|86753176|gb|ABD14718.1| pXO1-8-like hypothetical protein [Bacillus cereus] Length = 995 Score = 43.2 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T K ++E + ++ GL+L L+F+ L + L Sbjct: 824 TPPKRSAWLKEQVNSGVNVIICSQELVKVGLDLLAT-PTLIFYQLSFSLFTL-----NQA 877 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + +YL + T E + Q + K+ + + Sbjct: 878 ARRHWRIGQTKQCRTFYLGYRETFQEQMAQLIAQKNKAAEAM 919 >gi|187940163|gb|ACD39293.1| SNF2 family-related helicase [Pseudomonas aeruginosa] Length = 927 Score = 43.2 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ + + + + +L A G+NLQ+ +V + L W+ H+Q R+ Sbjct: 512 TPEERRERVDDMEDAEQRILVAT-DCLSEGINLQHLFTAVVHYDLAWNPTRHEQREGRVD 570 Query: 153 VTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTK 187 Q V L Q+ +D VL + K Sbjct: 571 RFGQH----AEEVRCTMLYGQDNPVDGFVLNVILKK 602 >gi|308808864|ref|XP_003081742.1| Vacuolar H+-ATPase V1 sector, subunit A (ISS) [Ostreococcus tauri] gi|116060208|emb|CAL56267.1| Vacuolar H+-ATPase V1 sector, subunit A (ISS) [Ostreococcus tauri] Length = 1791 Score = 43.2 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 18/124 (14%) Query: 91 GRTLDKDPCTIQEWNEG---------KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 D+ + ++ EG + + + G GL+ + +VF L D Sbjct: 585 STPSDERKVLVDKFREGAAVGADGVVSVRIALLSVKAAGTGLDF-STASCVVFAELPDDA 643 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQN---TIDELVLQRLRTKSTIQDLLLNAL 198 + R + G V VY+L A+ + DE QRL ++ + ++ Sbjct: 644 SLLE-----QAEARVHRRGNDSGVNVYFLCARGGACSHDEDRWQRLESQLDVCKEAIDGD 698 Query: 199 KKET 202 Sbjct: 699 DARV 702 >gi|317145448|ref|XP_001820788.2| hypothetical protein AOR_1_372144 [Aspergillus oryzae RIB40] Length = 583 Score = 43.2 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%) Query: 80 DLARLQKAFPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + F G T D+ ++ + + +L G+NLQ + ++ Sbjct: 411 EANIDAEVFHAGLTRDERMNLVERFTQKHDECMVLICAYNVNAAGMNLQNLCRNVHILTM 470 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + + R + G +R FVY +++ DE ++ R K Sbjct: 471 GLS-----KSVVNQAIGRVSRLGQERMTFVYEYRLRSSFDEDLVSRSERK 515 >gi|320584136|gb|EFW98347.1| DNA-dependent ATPase of the nucleotide excision repair factor 4 complex [Pichia angusta DL-1] Length = 1082 Score = 43.2 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 7/87 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L HGL + + F + W+ + +E + R + G + V+V L Sbjct: 880 VLVMDVKLASHGLTI-ISATNVFFLNPIWN-----KTVEAQAIKRSHRIGQTKEVYVETL 933 Query: 171 IAQNTIDELVL-QRLRTKSTIQDLLLN 196 I NTI++ + +R +TK L++ Sbjct: 934 ILDNTIEKEMYLKRSQTKVDETKELID 960 >gi|170696668|ref|ZP_02887785.1| helicase domain protein [Burkholderia graminis C4D1M] gi|170138411|gb|EDT06622.1| helicase domain protein [Burkholderia graminis C4D1M] Length = 1081 Score = 43.2 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 11/95 (11%), Positives = 26/95 (27%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 R + L + +N P + A + GL+ Sbjct: 851 DIKPFETRIRTHFALRFGNQQGEDGALARRKVVQAAFNSPFWPFVLASTSVGQEGLDFHN 910 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + +V ++L + + +Q R+ + Sbjct: 911 WCHSVVHWNLPSNPVDMEQREGRVHRYKGYAVRKN 945 >gi|207343185|gb|EDZ70726.1| YLR032Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1126 Score = 43.2 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 48/152 (31%), Gaps = 19/152 (12%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSD 80 + + +K LQL + + + I+EK + + F+ D Sbjct: 992 SKSSKITALLKELQL----LQDSSAGEQVVIFSQ-FSTYLDILEKE------LTHTFSKD 1040 Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 +A++ K + ++ + +L + G GLNL + W Sbjct: 1041 VAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLT-CASHAYMMDPW 1099 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 W +E + R + G +V V Sbjct: 1100 WSPS-----MEDQAIDRLHRIGQTNSVKVMRF 1126 >gi|294789356|ref|ZP_06754594.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453] gi|294482781|gb|EFG30470.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453] Length = 2270 Score = 43.2 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 59/204 (28%), Gaps = 14/204 (6%) Query: 6 KFQRELYCD-----LQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 + Q E D + + + + VK Q Y D K ++I +E Sbjct: 1709 QMQLENMLDAANVHIGNKISPKVAALLENVKKEQA--HIRYKDASGSLKNKFAKQIIFVE 1766 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG---KIPLLFAHPA 117 + IV + D+ + +N ++ Sbjct: 1767 SLAMHTKIKRAIVQNCGIPASKITFISGKFNSDPDEIIDVQERFNSDDEENGYVIVIANK 1826 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G+NLQ G + L W + Q R Q V VY+ A T D Sbjct: 1827 KAEVGINLQKGCQAIHHLELNWTPDSITQRNGRGIR----QGNTAEKVNVYFYEADGTFD 1882 Query: 178 ELVLQRLRTKSTIQDLLLNALKKE 201 + KS + +++ + E Sbjct: 1883 TYRRTTIDRKSNWIESVMSKAENE 1906 >gi|40643146|emb|CAE14681.1| unnamed protein product [Leptospira phage LE1] Length = 1971 Score = 43.2 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 12/112 (10%), Positives = 34/112 (30%), Gaps = 5/112 (4%) Query: 95 DKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++N + G++L + + W+ Q R Sbjct: 1626 KRFTEITNDFNNINGKCKIIIGTDVIKEGVDLNGNTAVAYNSCIDWNPTTEVQKRGRHHR 1685 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + V ++ +++ID + Q+ K + + + + I + Sbjct: 1686 PGNLLS----NVMWVDVLMEDSIDSKLYQKQGEKISRINQVFEKDGSKAIDI 1733 >gi|196010716|ref|XP_002115222.1| hypothetical protein TRIADDRAFT_59182 [Trichoplax adhaerens] gi|190581993|gb|EDV22067.1| hypothetical protein TRIADDRAFT_59182 [Trichoplax adhaerens] Length = 974 Score = 43.2 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 15/172 (8%), Positives = 41/172 (23%), Gaps = 42/172 (24%) Query: 20 IEAFNSASKTVKCLQLANGAVYYDEEK---------------------------HWKEVH 52 + + + ++ ++ + Sbjct: 358 MSSHSPLTELTVLKKICDHPRLLSSHACSELGLEEDDDDEVVEYKDFARSLPAIRVLLEE 417 Query: 53 DEKIKALEVII--EKANAAPIIVAYHFNSDLAR-----------LQKAFPQGRTLDKDPC 99 K++ L ++ + N ++ L + + + Sbjct: 418 AGKLQLLADLLENFEINGHRCLIFSQSRKMLNIIQKVVTERGYKMLRIDGTVTKPGRRME 477 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +QE+ G GLNL + ++ F W+ Q ++R Sbjct: 478 LVQEFQTNSSYLCFLLTTQVGGVGLNLTA-ADRVIIFDPSWNPATDAQAVDR 528 >gi|190015603|ref|YP_001967159.1| hypothetical protein BcAH187_pCER270_0012 [Bacillus cereus] gi|217956928|ref|YP_002336024.1| hypothetical protein BCAH187_C0012 [Bacillus cereus AH187] gi|116584510|gb|ABK00627.1| conserved hypothetical protein [Bacillus cereus] gi|217068442|gb|ACJ82690.1| conserved hypothetical protein [Bacillus cereus AH187] Length = 1098 Score = 43.2 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T K ++E + ++ GL+L L+F+ L + L Sbjct: 824 TPPKRSAWLKEQVNSGVNVIICSQELVKVGLDLLAT-PTLIFYQLSFSLFTL-----NQA 877 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + +YL + T E + Q + K+ + + Sbjct: 878 ARRHWRIGQTKQCRTFYLGYRETFQEQMAQLIAQKNKAAEAM 919 >gi|213972112|ref|ZP_03400204.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|213923150|gb|EEB56753.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 72 Score = 43.2 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%) Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 ++ R + G R V V +A +TID+ + Q L K + L++ +E Sbjct: 5 WTPGLQDQAEDRAYRNGQLRMVVVKIPLADDTIDQQLWQMLMDKRALASDLIDLEAEE 62 >gi|221067005|ref|ZP_03543110.1| SNF2-related protein [Comamonas testosteroni KF-1] gi|220712028|gb|EED67396.1| SNF2-related protein [Comamonas testosteroni KF-1] Length = 797 Score = 43.2 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 K + + E I +L +P GL+L I S + R Sbjct: 674 KREDWVADQVERGIDVLITNPELVKTGLDLLEFPTIAFMQSGFNVYTML------QAARR 727 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V V +L T L+ + K + + + + V Sbjct: 728 SWRIGQKHDVRVIFLGYAGTSQMECLRLMAKKIAVSQSTSGDMPESGLDV 777 >gi|229113041|ref|ZP_04242541.1| hypothetical protein bcere0018_52550 [Bacillus cereus Rock1-15] gi|228670434|gb|EEL25777.1| hypothetical protein bcere0018_52550 [Bacillus cereus Rock1-15] Length = 1098 Score = 43.2 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T K ++E + ++ GL+L L+F+ L + L Sbjct: 824 TPPKRSAWLKEQVNSGVNVIICSQELVKVGLDLLAT-PTLIFYQLSFSLFTL-----NQA 877 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + +YL + T E + Q + K+ + + Sbjct: 878 ARRHWRIGQTKQCRTFYLGYRETFQEQMAQLIAQKNKAAEAM 919 >gi|241662280|ref|YP_002980640.1| DEAD-like helicase [Ralstonia pickettii 12D] gi|240864307|gb|ACS61968.1| DEAD-like helicase [Ralstonia pickettii 12D] Length = 760 Score = 43.2 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 638 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 691 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL + L + K + + + + V Sbjct: 692 SWRIGQKQPVRVIYLGYAASSQMTCLGLMARKIMVSQSTSGDVPESGLDV 741 >gi|296131125|ref|YP_003638375.1| helicase domain protein [Cellulomonas flavigena DSM 20109] gi|296022940|gb|ADG76176.1| helicase domain protein [Cellulomonas flavigena DSM 20109] Length = 946 Score = 43.2 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 3/97 (3%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + I+ + G+NLQ +V + L W+ H+Q R+ Sbjct: 519 PPAERQERIRALTSTDARHVLVATDCLSEGVNLQDAFQAVVHYDLAWNPTRHEQREGRVD 578 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q A RAV +Y N+ID LVL L + Sbjct: 579 RFGQT-APTVRAVTIY--GKDNSIDGLVLDVLIRRHQ 612 >gi|229142277|ref|ZP_04270799.1| hypothetical protein bcere0013_53620 [Bacillus cereus BDRD-ST26] gi|228641215|gb|EEK97524.1| hypothetical protein bcere0013_53620 [Bacillus cereus BDRD-ST26] Length = 1086 Score = 43.2 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T K ++E + ++ GL+L L+F+ L + L Sbjct: 824 TPPKRSAWLKEQVNSGVNVIICSQELVKVGLDLLAT-PTLIFYQLSFSLFTL-----NQA 877 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + +YL + T E + Q + K+ + + Sbjct: 878 ARRHWRIGQTKQCRTFYLGYRETFQEQMAQLIAQKNKAAEAM 919 >gi|168183745|ref|ZP_02618409.1| helicase, Snf2 family [Clostridium botulinum Bf] gi|182673113|gb|EDT85074.1| helicase, Snf2 family [Clostridium botulinum Bf] Length = 900 Score = 43.2 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 5/106 (4%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G + I+ + + + GLNLQ G ++ F L W+ +Q R Sbjct: 733 GIYSKRTKEEIKSMVKRYEIKILLGTDAASEGLNLQTLGTLIN-FDLPWNPTRLEQRKGR 791 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I Q V++Y + ++++++ V L + + Sbjct: 792 IQRIGQVNDV----VYIYNMRYKDSVEDRVHSMLSERLENIHNMFG 833 >gi|8188|emb|CAA44496.1| lodestar protein [Drosophila melanogaster] Length = 974 Score = 43.2 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 7/71 (9%), Positives = 21/71 (29%), Gaps = 6/71 (8%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA-----VYYDEEKHWKEVHDEKIKA 58 Y ++ + +++ + ++ Q+ + EE H Sbjct: 767 YKMHEKFARMAGSKKEVKSHDILVLLLRLRQICCHPGLIDAMLDGEESQTMGDHSSDSDT 826 Query: 59 LE-VIIEKANA 68 E ++ + N Sbjct: 827 PEIDLLAQLNK 837 >gi|241765668|ref|ZP_04763619.1| DEAD-like helicase [Acidovorax delafieldii 2AN] gi|241364481|gb|EER59578.1| DEAD-like helicase [Acidovorax delafieldii 2AN] Length = 759 Score = 43.2 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K +V V YL T L+ + K + + + + V Sbjct: 691 SWRIGQKLSVRVIYLGYAATSQMTCLELMAKKIMVSQSTSGDVPESGLDV 740 >gi|237795505|ref|YP_002863057.1| helicase, Snf2 family [Clostridium botulinum Ba4 str. 657] gi|229260745|gb|ACQ51778.1| helicase, Snf2 family [Clostridium botulinum Ba4 str. 657] Length = 900 Score = 43.2 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 5/106 (4%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G + I+ + + + GLNLQ G ++ F L W+ +Q R Sbjct: 733 GIYSKRTKEEIKSMVKRYEIKILLGTDAASEGLNLQTLGTLIN-FDLPWNPTRLEQRKGR 791 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I Q V++Y + ++++++ V L + + Sbjct: 792 IQRIGQVNDV----VYIYNMRYKDSVEDRVHSMLSERLENIHNMFG 833 >gi|167841314|ref|ZP_02467998.1| helicase domain protein [Burkholderia thailandensis MSMB43] Length = 936 Score = 43.2 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 50/159 (31%), Gaps = 14/159 (8%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 K L + ++ V I + + Sbjct: 456 KLRLLGSHLKQLIDDGFNPVVFCRYIATARYLHNHLTG----------RFRGVTVEVVTG 505 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 ++ + E + LL A G+NLQ + +V + L W+ H+Q R Sbjct: 506 EFPAEERERRVDALGEAERRLLIAT-DCLSEGINLQENLDAVVHYDLSWNPTRHEQREGR 564 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + Q + RA +Y A N +D VLQ + K+ Sbjct: 565 VDRFGQT-SPRVRATLIY--GANNPVDGAVLQVILRKAE 600 >gi|328859650|gb|EGG08758.1| hypothetical protein MELLADRAFT_84282 [Melampsora larici-populina 98AG31] Length = 112 Score = 43.2 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 30/76 (39%), Gaps = 6/76 (7%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + G GLN+ + + W+ + QQ ++R+ + G V Sbjct: 1 MVEAFVVLIEAGGVGLNMT-CADEVYSMDAHWNPQVVQQAVDRL-----YRIGQTMPVRA 54 Query: 168 YYLIAQNTIDELVLQR 183 ++++ +I++ + Sbjct: 55 FHVVTGQSIEQHLYNV 70 >gi|40445356|ref|NP_954816.1| helicase [Gordonia westfalica] gi|40217386|emb|CAE09137.1| putative helicase; putative methylase [Gordonia westfalica] Length = 1630 Score = 43.2 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 4/88 (4%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G+I +L + G G+N+Q L + W + +Q RI Q + Sbjct: 1170 AGRIAVLVGSTSKMGTGMNVQGRLIGLHHMDVPWRPADLEQREGRIIR----QGNQNPRI 1225 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + + T D ++ ++ +K+ + Sbjct: 1226 EILNYVTAGTTDTVMWSKVESKAAFIEQ 1253 >gi|316974660|gb|EFV58143.1| domain protein, SNF2 family [Trichinella spiralis] Length = 737 Score = 43.2 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%) Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 R + G +V + YL+A+ T D+ + ++ K I Sbjct: 629 QAEDRAHRVGQLNSVLIIYLVAKGTADDNIWTMIKKKLEI 668 >gi|147920338|ref|YP_685889.1| Hef nuclease [uncultured methanogenic archaeon RC-I] gi|110621285|emb|CAJ36563.1| putative type III restriction-modification system, restriction subunit [uncultured methanogenic archaeon RC-I] Length = 792 Score = 43.2 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 71/220 (32%), Gaps = 38/220 (17%) Query: 1 MKQY-HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKI-KA 58 +++Y + + E +A + + A+ E EK+ + Sbjct: 308 LRRYFERMKEEAST---KGGSKATRRLFEDARLQ----HAMRVTNETDEVNPKTEKVAEI 360 Query: 59 LEVIIEKANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPC 99 + ++ A+ +IV ++ + + K +G + K Sbjct: 361 VLEQLQANPASKVIVFTNYRDTADVVAKRLAEVEGIKPVRFVGQASKLNDKGLSQKKQVE 420 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + G+ L A + GL++ ++++F+ Q R G + Sbjct: 421 ILDRFRAGEYNTLIAT-SVAEEGLDIPST-DLVLFYEPVPSEIRSIQRRGRTGRNTVGR- 477 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V LI++ T DE + ++K + +K Sbjct: 478 -------VVVLISKGTRDEAAYRSSQSKERKMYKTMQNMK 510 >gi|295701500|ref|YP_003610501.1| helicase [Burkholderia sp. CCGE1002] gi|295441823|gb|ADG20990.1| helicase domain protein [Burkholderia sp. CCGE1002] Length = 1046 Score = 43.2 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 6/132 (4%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + +A +SD + + + + G+ L + AS G N Sbjct: 877 ENPGVLNAIARELSSDGVDTVLFHGEIPISKRVADKDRRFITGRATGLLSTKASGRAGYN 936 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + ++F+ W IE + R + K + V Y +IDE Q + Sbjct: 937 LPN-ADYVLFYDRSWTW-----RIEYQAMRRALRWNRKGMLNVEYFHLPGSIDEYQAQMV 990 Query: 185 RTKSTIQDLLLN 196 K L+ Sbjct: 991 AHKRDSMQAGLD 1002 >gi|169601474|ref|XP_001794159.1| hypothetical protein SNOG_03602 [Phaeosphaeria nodorum SN15] gi|111067687|gb|EAT88807.1| hypothetical protein SNOG_03602 [Phaeosphaeria nodorum SN15] Length = 986 Score = 43.2 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 45/130 (34%), Gaps = 20/130 (15%) Query: 53 DEKIKALEVIIE---KANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPC 99 K++AL I++ + + IV + S L L+ G T + Sbjct: 780 SSKVEALLDILKATSQDPSNKTIVFSQWTSFLDLLEPHLTAGGLTFTRIDGSMTAPQRDT 839 Query: 100 TIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ A A C GLNL N ++ WW IE V R + Sbjct: 840 ALDALESNPNCTIMLASLAVCSVGLNLVA-ANHVIMADSWWAPA-----IEDQAVDRVHR 893 Query: 159 AGFKRAVFVY 168 G KR V+ Sbjct: 894 LGQKRETKVF 903 >gi|255089767|ref|XP_002506805.1| predicted protein [Micromonas sp. RCC299] gi|226522078|gb|ACO68063.1| predicted protein [Micromonas sp. RCC299] Length = 1263 Score = 43.2 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 26/84 (30%), Gaps = 10/84 (11%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFS----------LWWDLEEHQQMIERIGVTRQRQA 159 ++ S GLNL ++++ ER V R + Sbjct: 1176 RVMCLAFGSHASGLNLHRANHVVIVHPFAAKSVCPGAPDLTPLAQAAAYERQAVGRIARY 1235 Query: 160 GFKRAVFVYYLIAQNTIDELVLQR 183 ++ Y + A T++E + Sbjct: 1236 PQRKTCHAYRMFAVGTVEEELYAV 1259 >gi|228969844|ref|ZP_04130581.1| hypothetical protein bthur0004_64810 [Bacillus thuringiensis serovar sotto str. T04001] gi|228789869|gb|EEM37714.1| hypothetical protein bthur0004_64810 [Bacillus thuringiensis serovar sotto str. T04001] Length = 1096 Score = 43.2 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T K ++E + ++ GL+L L+F+ L + L Sbjct: 824 TPPKRSAWLKEQVNSGVNVIICSQELVKVGLDLLAT-PTLIFYQLSFSLFTL-----NQA 877 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + +YL + T E + Q + K+ + + Sbjct: 878 ARRHWRIGQTKQCRTFYLGYRETFQEQMAQLIAQKNKAAEAM 919 >gi|307111221|gb|EFN59456.1| hypothetical protein CHLNCDRAFT_138032 [Chlorella variabilis] Length = 1211 Score = 42.8 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 10/102 (9%) Query: 96 KDPCTIQEWNEGKI-----PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + +Q +N LF G + +F W + Sbjct: 980 ERQQAVQRFNAAAGAGGAQRWLFLQHTRSCGVGTDLPGIDAAIFLDSDWSA-----RKDA 1034 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 ++ + G + VY L + T +E +LQ + Sbjct: 1035 QALSHALRVGSPDRLRVYRLYCRRTCEERLLQLSDRMRGLDA 1076 >gi|229164867|ref|ZP_04292685.1| hypothetical protein bcere0009_55430 [Bacillus cereus R309803] gi|228618588|gb|EEK75596.1| hypothetical protein bcere0009_55430 [Bacillus cereus R309803] Length = 1108 Score = 42.8 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T K ++E + ++ GL+L L+F+ L + L Sbjct: 834 TPPKRSEWLKEQVNSGVNVIICSQELVKVGLDLLAT-PTLIFYQLSFSLFTL-----NQA 887 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R + G + +YL + T E + Q + K+ + + Sbjct: 888 ARRHWRIGQTKQCRTFYLGYRETFQEQMAQLIAQKNKAAEAM 929 >gi|145351304|ref|XP_001420022.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580255|gb|ABO98315.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 1148 Score = 42.8 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 18/124 (14%) Query: 91 GRTLDKDPCTIQEWNEGK---------IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 D+ + ++ EG + + + G GL+ + ++F L D Sbjct: 583 STPSDERKVLVDKFREGAQTREDGVVGVRVALLSVKAAGTGLDF-STASCVIFAELPDDA 641 Query: 142 EEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI---DELVLQRLRTKSTIQDLLLNAL 198 + R + G V VY+L A+ DE RL ++ + L+ Sbjct: 642 SLLE-----QAEDRAHRRGNDSGVNVYFLCARGGACAHDEDRWARLESQLDLCREALDGD 696 Query: 199 KKET 202 + Sbjct: 697 GERV 700 >gi|308051050|ref|YP_003914616.1| SNF2-related protein [Ferrimonas balearica DSM 9799] gi|307633240|gb|ADN77542.1| SNF2-related protein [Ferrimonas balearica DSM 9799] Length = 956 Score = 42.8 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 9/90 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + EG +L G N Q+ + L+ F L + + + Sbjct: 524 FHEGMSILERDKAAAFFAQQEGGAQVLICS-EIGSEGRNFQF-AHHLIMFDLPQNPDLLE 581 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 Q I R+ + G + V ++ + + Sbjct: 582 QRIGRLD-----RIGQTQDVQIHVPYIEGS 606 >gi|28199206|ref|NP_779520.1| hypothetical protein PD1321 [Xylella fastidiosa Temecula1] gi|182681936|ref|YP_001830096.1| hypothetical protein XfasM23_1406 [Xylella fastidiosa M23] gi|28057312|gb|AAO29169.1| phage-related protein [Xylella fastidiosa Temecula1] gi|182632046|gb|ACB92822.1| hypothetical protein XfasM23_1406 [Xylella fastidiosa M23] gi|307578194|gb|ADN62163.1| hypothetical protein XFLM_00705 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 55 Score = 42.8 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 17/38 (44%), Positives = 29/38 (76%) Query: 164 AVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VF+++++A +T+DELV+ R +K +QDLLL A+K+ Sbjct: 4 PVFIHHIVAADTVDELVMVRRESKREVQDLLLEAVKRR 41 >gi|299531101|ref|ZP_07044514.1| helicase domain-containing protein [Comamonas testosteroni S44] gi|298721058|gb|EFI62002.1| helicase domain-containing protein [Comamonas testosteroni S44] Length = 797 Score = 42.8 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 K + + E I +L +P GL+L I S + R Sbjct: 674 KREDWVADQVERGIDVLITNPELVKTGLDLLEFPTIAFMQSGFNVYTML------QAARR 727 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V V +L T L+ + K + + + + V Sbjct: 728 SWRIGQKHDVRVIFLGYAGTSQMECLRLMAKKIAVSQSTSGDMPESGLDV 777 >gi|10954867|ref|NP_053287.1| hypothetical protein pTi-SAKURA_p049 [Agrobacterium tumefaciens] gi|6498220|dbj|BAA87672.1| tiorf47 [Agrobacterium tumefaciens] Length = 1693 Score = 42.8 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 42/138 (30%), Gaps = 11/138 (7%) Query: 67 NAAPIIVAYHFNSD----LARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASC 119 AY + D L + K + + G++ L + Sbjct: 1312 EKTRGFSAYRWIRDELIRLGVPASEIAFMQDFKKSEAKQRLFGDVRAGRVRFLIGSSETM 1371 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+N+Q L + W + +Q RI Q V ++ + ++D Sbjct: 1372 GTGVNVQLRLKALHHLDVPWLPSQIEQREGRIVR----QGNQHDEVDIFAYATEGSLDAT 1427 Query: 180 VLQRLRTKSTIQDLLLNA 197 + Q K+ L+ Sbjct: 1428 MWQNNERKARFIAAALSG 1445 >gi|108763517|ref|YP_632454.1| putative helicase [Myxococcus xanthus DK 1622] gi|108467397|gb|ABF92582.1| putative helicase [Myxococcus xanthus DK 1622] Length = 993 Score = 42.8 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 5/124 (4%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 D R + + +N P++ GL+L + +V L Sbjct: 830 DDAVRAGALVRHTVEGESRERLREAFNTPLYPMVLVANEVMQEGLDLHHHCRRVVHHDLA 889 Query: 139 WDLEEHQQMIERIGVT----RQRQAGFKRAV-FVYYLIAQNTIDELVLQRLRTKSTIQDL 193 W+ + +Q + R+ ++ +A V+ + NTIDE + + +R + + Sbjct: 890 WNPAQLEQRVGRVDRLGSLVQRLRARQPDTTLDVHLPLIANTIDERLERTVRLRERWLEF 949 Query: 194 LLNA 197 LL A Sbjct: 950 LLGA 953 >gi|325853894|ref|ZP_08171410.1| helicase C-terminal domain protein [Prevotella denticola CRIS 18C-A] gi|325484231|gb|EGC87161.1| helicase C-terminal domain protein [Prevotella denticola CRIS 18C-A] Length = 542 Score = 42.8 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 2/100 (2%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I+ N+G++ +LF + G G+N Q + W + Q R Sbjct: 151 KKAVIEAMNDGRVRVLFGSTSMLGTGVNAQQRAVAVHHLDTPWRPSDLAQRDGRAVRKGN 210 Query: 157 --RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + V V + ++D L K T L Sbjct: 211 EIARLYADNKVDVIIYAVEKSLDSYKFNLLHCKQTFISQL 250 >gi|304395575|ref|ZP_07377458.1| helicase domain protein [Pantoea sp. aB] gi|304356869|gb|EFM21233.1| helicase domain protein [Pantoea sp. aB] Length = 954 Score = 42.8 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 13/102 (12%) Query: 99 CTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 T++ + + + PL L G+NL + + +V F + W L QQ RI Sbjct: 491 ETVEAFGKQQSPLRLLICSDVASEGINLHHLSHKMVHFDIPWSLMVFQQRNGRID----- 545 Query: 158 QAGFKRAVFVYYLIAQ------NTIDELVLQRLRTKSTIQDL 193 + G K + YL+ + N D VLQ L K Sbjct: 546 RYGQKHVPQIRYLLTEANEPQING-DMRVLQVLINKDEQAQK 586 >gi|313105927|ref|ZP_07792189.1| DEAD/DEAH box helicase [Pseudomonas aeruginosa 39016] gi|310878691|gb|EFQ37285.1| DEAD/DEAH box helicase [Pseudomonas aeruginosa 39016] Length = 749 Score = 42.8 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + I +L +P GL+L + F +++ Q R Sbjct: 627 RREDWILDQVDRGIDVLITNPELVKTGLDLLDF-PTIAFLQTGYNVYTLQ-----QAARR 680 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K V V + + LQ + K + L++L ++ V Sbjct: 681 SWRIGQKHPVRVVFFGYAGSSQITCLQLMAKKIAVAQSTSGDVPESGLDSLNQDGDSV 738 >gi|186687127|ref|YP_001870270.1| helicase domain-containing protein [Nostoc punctiforme PCC 73102] gi|186469430|gb|ACC85229.1| helicase domain protein [Nostoc punctiforme PCC 73102] Length = 946 Score = 42.8 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 14/138 (10%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGR----------TLDKDPCTIQEWNEGKI 109 + + I ++ +D R + + + D+ ++E Sbjct: 484 KDEMNPIVWCRYIATANYVADALRQKLQKKGSQIRVIAITGELSEDEREIRLEELKSYPQ 543 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A G+NLQ + ++ + L W+ +Q RI Q K + Sbjct: 544 RVLVAT-DCLSEGVNLQTHFSAVIHYDLPWNPNRLEQREGRIDRYGQTATKVKACLLYGR 602 Query: 170 LIAQNTIDELVLQRLRTK 187 N +D VL L K Sbjct: 603 ---DNPVDGAVLDVLIRK 617 >gi|251788102|ref|YP_003002823.1| DEAD-like helicase [Dickeya zeae Ech1591] gi|247536723|gb|ACT05344.1| DEAD-like helicase [Dickeya zeae Ech1591] Length = 759 Score = 42.8 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYTLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G + V V YL T L + K + + + + V Sbjct: 691 SWRIGQTQPVKVIYLGYAATSQMTCLALMAKKILVSQSTSGDVPESGLDV 740 >gi|209886780|ref|YP_002290637.1| N-6 DNA methylase [Oligotropha carboxidovorans OM5] gi|209874976|gb|ACI94772.1| N-6 DNA methylase [Oligotropha carboxidovorans OM5] Length = 1700 Score = 42.8 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 11/135 (8%) Query: 70 PIIVAYHFNSD----LARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASCGHG 122 AY + D + + K + + GK+ L + G G Sbjct: 1319 RGFSAYRWVRDELIRMGVPASEIAFMQEFKKSEAKQRLFGDVRAGKVRFLIGSSETMGTG 1378 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 +N Q L + W + +Q RI Q V ++ + ++D + Q Sbjct: 1379 VNAQLRLKALHHLDVPWLPSQIEQREGRIVR----QGNQHDEVDIFAYATEGSLDAQMWQ 1434 Query: 183 RLRTKSTIQDLLLNA 197 K+ L+ Sbjct: 1435 NNERKARFIAAALSG 1449 >gi|88809325|ref|ZP_01124833.1| possible helicase [Synechococcus sp. WH 7805] gi|88786544|gb|EAR17703.1| possible helicase [Synechococcus sp. WH 7805] Length = 502 Score = 42.8 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 64/160 (40%), Gaps = 18/160 (11%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG-----RTLDKDPCTIQEWNEG 107 K+ A E ++++ A +++ F + LA LQ+ + ++ + + +G Sbjct: 339 KLPAAERLVQQLRAQGESVVLFSSFVAPLALLQQRLGGELLSGRQKPEERQMAVDRFQDG 398 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 LL A + G G L +V W + R + G + Sbjct: 399 STDLLLATFGAGGLGFTLHR-ARQVVLLERPWTPGDVD-----QAEDRCHRLGMDGELMS 452 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN----ALKKETI 203 ++L D+LV + +K++ +LL+ +++++++ Sbjct: 453 HWLQL-GPADQLVDGLVASKASRIELLMGPRRVSVERQSL 491 >gi|332159200|ref|YP_004424479.1| ATP-dependent RNA helicase HepA, putative [Pyrococcus sp. NA2] gi|331034663|gb|AEC52475.1| ATP-dependent RNA helicase HepA, putative [Pyrococcus sp. NA2] Length = 1029 Score = 42.8 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 74/200 (37%), Gaps = 22/200 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + ++ ++ I +K + L++ + + E+ + + E + + Sbjct: 370 ERLKK--LIEMGESIIRRERIDTKAKELLKIVDEHL---EKGNKVIIFTEYLD-TLFYLN 423 Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 + R+ + + +KD + W E +L A A+ L+ Sbjct: 424 EILGEKYGP--------ERVTLIYGSMKPEEKDESVRKLWAEDGASILIATDAAG-ESLD 474 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV-FVYYLIAQNTIDELVLQR 183 LQ N+++ + + W+ + Q I R+ + G K+ V F+Y ++ ++ VL+ Sbjct: 475 LQA-ANVVINYEIPWNPVVYIQRIGRV-----YRYGQKKPVIFIYGILPVFKVERRVLEV 528 Query: 184 LRTKSTIQDLLLNALKKETI 203 + K + E + Sbjct: 529 VLDKINKIKTDFDLGSAEIV 548 >gi|261820937|ref|YP_003259043.1| DEAD/DEAH box helicase [Pectobacterium wasabiae WPP163] gi|261604950|gb|ACX87436.1| DEAD-like helicase [Pectobacterium wasabiae WPP163] Length = 759 Score = 42.8 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 637 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYTLQ------QAARR 690 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K+ V V YL T L + K + + + + V Sbjct: 691 SWRIGQKQPVKVIYLGYTATSQMTCLALMAKKILVSQSTSGDVPESGLDV 740 >gi|328885780|emb|CCA59019.1| helicase [Streptomyces venezuelae ATCC 10712] Length = 1082 Score = 42.8 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 10/90 (11%) Query: 89 PQGRTLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 G ++ + + +L A + G++LQ + LV + + ++ + Sbjct: 583 HGGMNAEERERLRLAFQAEPAENDVRILLAT-DAASEGIDLQRHCHRLVNYDIPFNPNKL 641 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQN 174 +Q I RI Q A + + I Sbjct: 642 EQRIGRIDRYGQTTAPQ-----IVHFIGSG 666 >gi|121594543|ref|YP_986439.1| helicase domain-containing protein [Acidovorax sp. JS42] gi|120606623|gb|ABM42363.1| helicase domain protein [Acidovorax sp. JS42] Length = 1046 Score = 42.8 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 55/161 (34%), Gaps = 38/161 (23%) Query: 67 NAAPIIVAYHFNSDLARLQKAF-------------PQGRTLDKDPCTIQEWN----EGKI 109 N +I+ + + + + G T D+ + + + Sbjct: 520 NDRRVILFTEYRTTHQWMHEILASHGFGGERLGLLHGGLTQDEREPIKAAFQASPKDSPV 579 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + G++LQ N L+ + ++ +Q RI QR ++ V +++ Sbjct: 580 RILLAT-DAASEGIDLQNHCNCLIHLEIPYNPNVMEQRNGRIDRHGQR----EKEVLIWH 634 Query: 170 LI--------AQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + + + +L+ LR L +++ + Sbjct: 635 PVDGGDKSHASVGGHGDDILRALRK--------LESMRADM 667 >gi|148807330|gb|ABR13404.1| putative helicase [Pseudomonas aeruginosa] Length = 749 Score = 42.8 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + I +L +P GL+L + F +++ Q R Sbjct: 627 RREDWILDQVDRGIDVLITNPELVKTGLDLLDF-PTIAFLQTGYNVYTLQ-----QAARR 680 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K V V + + LQ + K + L++L ++ V Sbjct: 681 SWRIGQKHPVRVVFFGYAGSSQITCLQLMAKKIAVAQSTSGDVPESGLDSLNQDGDSV 738 >gi|298251768|ref|ZP_06975571.1| helicase domain protein [Ktedonobacter racemifer DSM 44963] gi|297546360|gb|EFH80228.1| helicase domain protein [Ktedonobacter racemifer DSM 44963] Length = 1065 Score = 42.8 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 33/88 (37%), Gaps = 9/88 (10%) Query: 89 PQGRTLDKDPCTIQEWN----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 G + + + +L A + G++LQ + L+ + + W+ Sbjct: 566 YGGMDTKDREEVKAAFQADPDDASVRILLAT-DAASEGIDLQNHCSRLIHYEIPWNPNRL 624 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIA 172 +Q R+ Q +A V +Y+ ++ Sbjct: 625 EQRNGRVDRHGQ-RAPQ---VDIYHFVS 648 >gi|254238747|ref|ZP_04932070.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126170678|gb|EAZ56189.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 751 Score = 42.8 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + I +L +P GL+L + F +++ Q R Sbjct: 629 RREDWILDQVDRGIDVLITNPELVKTGLDLLDF-PTIAFLQTGYNVYTLQ-----QAARR 682 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K V V + + LQ + K + L++L ++ V Sbjct: 683 SWRIGQKHPVRVVFFGYAGSSQITCLQLMAKKIAVAQSTSGDVPESGLDSLNQDGDSV 740 >gi|297820192|ref|XP_002877979.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297323817|gb|EFH54238.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1370 Score = 42.8 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 60/173 (34%), Gaps = 12/173 (6%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLD 95 +G E +I + ++ + + K + + + Sbjct: 1164 TSGTFLGKESHGQDCGSQMVFVDKVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMHSCN 1223 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 K N+ L S GL+L + ++ + +W + +E ++R Sbjct: 1224 KMKSLAMFQNDADCMALLM-DGSAALGLDLSFVTHVFLMEPIWD------KSLEEQVISR 1276 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLR--TKST--IQDLLLNALKKETIH 204 + G KR +FV L TI+E +++ L KS + + A K+ET Sbjct: 1277 AHRMGAKRPIFVETLTMCGTIEEQMMRFLEDAEKSDRLLSGDYIEA-KQETTR 1328 >gi|116052629|ref|YP_792944.1| hypothetical protein PA14_59540 [Pseudomonas aeruginosa UCBPP-PA14] gi|32481674|gb|AAP84188.1| plasmid related protein [Pseudomonas aeruginosa PA14] gi|115587850|gb|ABJ13865.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 749 Score = 42.8 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + I +L +P GL+L + F +++ Q R Sbjct: 627 RREDWILDQVDRGIDVLITNPELVKTGLDLLDF-PTIAFLQTGYNVYTLQ-----QAARR 680 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K V V + + LQ + K + L++L ++ V Sbjct: 681 SWRIGQKHPVRVVFFGYAGSSQITCLQLMAKKIAVAQSTSGDVPESGLDSLNQDGDSV 738 >gi|152986816|ref|YP_001349842.1| DEAD/DEAH box helicase [Pseudomonas aeruginosa PA7] gi|150961974|gb|ABR83999.1| DEAD/DEAH box helicase [Pseudomonas aeruginosa PA7] Length = 749 Score = 42.8 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + I +L +P GL+L + F +++ Q R Sbjct: 627 RREDWILDQVDRGIDVLITNPELVKTGLDLLDF-PTIAFLQTGYNVYTLQ-----QAARR 680 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K V V + + LQ + K + L++L ++ V Sbjct: 681 SWRIGQKHPVRVVFFGYAGSSQITCLQLMAKKIAVAQSTSGDVPESGLDSLNQDGDSV 738 >gi|47079403|gb|AAT10146.1| ATP-dependent RNA helicase [uncultured marine group II euryarchaeote DeepAnt-JyKC7] Length = 878 Score = 42.8 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 10/122 (8%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + +K+ G T + I+E+ G +L A + GL++ ++++F+ Sbjct: 393 QFIGQSRKSSAGGLTPKQQVARIEEFRSGSANVLIAT-SVGEEGLDIPT-ADLVIFYEPV 450 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 E + R+ + G R V LIA++T DE K + + Sbjct: 451 PS--------EIRTIQRRGRTGRHRDGDVVVLIAEDTRDEGARAAALRKEENMHRAVQRV 502 Query: 199 KK 200 ++ Sbjct: 503 RR 504 >gi|29376809|ref|NP_815963.1| hypothetical protein EF2307 [Enterococcus faecalis V583] gi|29344274|gb|AAO82033.1| conserved hypothetical protein [Enterococcus faecalis V583] Length = 3173 Score = 42.8 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + G++ +L A G G N+Q W + +Q Sbjct: 2770 FIHDANTETQKAELFAKVRRGQVRVLIGSTAKMGAGTNVQNRIVASHDLDCPWRPADLEQ 2829 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R RQ +V ++ + + T D + K ++ + Sbjct: 2830 RAGR----SLRQGNMNASVKMFKYVTKGTFDAYNWGLVENKQKFIGQIMTS 2876 >gi|255544007|ref|XP_002513066.1| conserved hypothetical protein [Ricinus communis] gi|223548077|gb|EEF49569.1| conserved hypothetical protein [Ricinus communis] Length = 1322 Score = 42.8 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 51/153 (33%), Gaps = 7/153 (4%) Query: 34 QLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRT 93 Q+ + +K +I + ++ + + + Sbjct: 1130 QIGESNALLQDCSRQSSESYKKAPEKVLIFSQFLEHIHVIEQQLTFAGIKFAGLYSPMHS 1189 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +K ++ L S GL+L + ++ + +W + +E + Sbjct: 1190 SNKMKSLATFQHDATCLALLM-DGSAALGLDLSFVTHVFLMEPIWD------RSMEEQVI 1242 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +R + G R V V L + TI+E +L+ L+ Sbjct: 1243 SRAHRMGATRPVQVETLAMRGTIEEQMLEFLQD 1275 >gi|171685256|ref|XP_001907569.1| hypothetical protein [Podospora anserina S mat+] gi|170942589|emb|CAP68241.1| unnamed protein product [Podospora anserina S mat+] Length = 255 Score = 42.8 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 19/174 (10%), Positives = 44/174 (25%), Gaps = 41/174 (23%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD- 97 + + V ++ + N +P IV + L + + + L + Sbjct: 86 HLQQTPRDTKRYVGSARLAEVLENQAYIN-SPSIVFSCWTKTLDLVALHLTRMKILHQRI 144 Query: 98 ---PCTIQEWNEGK---------IPLLFAHPASCGHGL---------------------- 123 + + +P+L G Sbjct: 145 DGRQKLAERQHNMSRFVSDEGTSVPVLLTTTGVGAFGYVPSPPTPRYPNLANHPTSRVSR 204 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 N + W+ +E ++R + G K+ V V + T++ Sbjct: 205 LNLTAANHVYILEPQWNPS-----VESQALSRVARRGQKKTVLVTRYLVHGTVE 253 >gi|159472472|ref|XP_001694375.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas reinhardtii] gi|158277038|gb|EDP02808.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas reinhardtii] Length = 837 Score = 42.8 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 26/130 (20%) Query: 68 AAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQEWNE--GKIPLLFAH 115 +I+ F L L++ + + I +N+ Sbjct: 452 GHRLIIFSQFTRTLDLLEEWLNGRGLGYMRIDGTVSGSERQRRIDRFNQQPDAYFAFLLS 511 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER------------IGVTRQRQAGFKR 163 + G G+NL + ++ F W+ Q + R I V Q Sbjct: 512 TRAGGLGINL-ATADTVIIFDSDWNPHNDLQ-VSRKKMMLEHLVLWLIAVHDLDQRDLCV 569 Query: 164 AVFVYYLIAQ 173 +VY ++ + Sbjct: 570 PAWVYRIVCE 579 >gi|254244594|ref|ZP_04937916.1| hypothetical protein PA2G_05460 [Pseudomonas aeruginosa 2192] gi|126197972|gb|EAZ62035.1| hypothetical protein PA2G_05460 [Pseudomonas aeruginosa 2192] Length = 751 Score = 42.8 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + I +L +P GL+L + F +++ Q R Sbjct: 629 RREDWILDQVDRGIDVLITNPELVKTGLDLLDF-PTIAFLQTGYNVYTLQ-----QAARR 682 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K V V + + LQ + K + L++L ++ V Sbjct: 683 SWRIGQKHPVRVVFFGYAGSSQITCLQLMAKKIAVAQSTSGDVPESGLDSLNQDGDSV 740 >gi|310831120|ref|YP_003969763.1| putative superfamily II helicase/VV D11-like transcription factor [Cafeteria roenbergensis virus BV-PW1] gi|309386304|gb|ADO67164.1| putative superfamily II helicase/VV D11-like transcription factor [Cafeteria roenbergensis virus BV-PW1] Length = 570 Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 53/188 (28%), Gaps = 22/188 (11%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF 88 K Q E + K + + + R + Sbjct: 374 LKKLKQ---------SEGPCFVYSNFKTYGGIDCFIRVLKKHGWKDFKKQGEGTRRFAIW 424 Query: 89 PQGRTLDKDPCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 T++ +N G L S G+ L + +W+L Sbjct: 425 SGDETMEYKSLVKSTFNQPNNHNGSKLHLILGSPSIKEGVTL-KRLEQMHILEPYWNLSR 483 Query: 144 HQQMIERIGVTRQRQ--AGFKRAVFVYYLIAQ-----NTIDELVLQRLRTKSTIQDLLLN 196 Q+I R KR V +Y +A+ ++DE + + + K+ + + Sbjct: 484 MLQIIGRGVRYCSHADLPKRKRKVDIYLYLAKTPDNRESVDEYIWKLAKQKAKLINQFEK 543 Query: 197 ALKKETIH 204 +K+ I Sbjct: 544 TMKEHAID 551 >gi|307580244|gb|ADN64213.1| SNF2-related protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 330 Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 24/51 (47%), Positives = 37/51 (72%), Gaps = 1/51 (1%) Query: 2 KQYHKFQRELYCDLQ-GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV 51 + Y +++++ L+ G +EAFN+ASKT+KCLQLANGA+Y D+ + EV Sbjct: 257 RLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEV 307 >gi|170068621|ref|XP_001868938.1| rothmund-thomson syndrome DNA helicase recq4 [Culex quinquefasciatus] gi|167864601|gb|EDS27984.1| rothmund-thomson syndrome DNA helicase recq4 [Culex quinquefasciatus] Length = 1093 Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 51/158 (32%), Gaps = 13/158 (8%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 + Y + E ++ ++ + A A + + + G + Sbjct: 583 IVYCTRRDECERISGFLRTCFQDAQRESEAKEGAASKKRKRVNYTAEPYHAGMPSSRRRT 642 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER--------- 150 + G++ ++ A A ++ +++ + E + Q + R Sbjct: 643 IQNAFMSGELRIVVATIAFGMGINK--SDIRAIIHYNMPRNFESYVQEVGRAGRDGKPSH 700 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 V + G + + I N+ID V+++L K Sbjct: 701 CHVFLDNRGGDRNELR--RHIYANSIDRHVIRKLLQKI 736 >gi|107099832|ref|ZP_01363750.1| hypothetical protein PaerPA_01000852 [Pseudomonas aeruginosa PACS2] gi|37955709|gb|AAP22548.1| putative helicase [Pseudomonas aeruginosa] Length = 751 Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + I +L +P GL+L + F +++ Q R Sbjct: 629 RREDWILDQVDRGIDVLITNPELVKTGLDLLDF-PTIAFLQTGYNVYTLQ-----QAARR 682 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K V V + + LQ + K + L++L ++ V Sbjct: 683 SWRIGQKHPVRVVFFGYAGSSQITCLQLMAKKIAVAQSTSGDVPESGLDSLNQDGDSV 740 >gi|298254935|ref|ZP_06978521.1| Snf2 family protein [Streptococcus pneumoniae str. Canada MDR_19A] Length = 1203 Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats. Identities = 8/90 (8%), Positives = 31/90 (34%), Gaps = 8/90 (8%) Query: 5 HKFQRELYCDLQGEN--IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 + + + + S ++ Q+ + + E+ K+ +L + Sbjct: 813 QQMRDH-LAQVSEQEFQRSRVEILSGLMRLRQICDTPALFMEDYQGA---SGKLDSLRDL 868 Query: 63 IEK--ANAAPIIVAYHFNSDLARLQKAFPQ 90 + + +++ F L ++++A+ Sbjct: 869 LVQVADGGHRVLIFSQFKGMLEKIEQAYTY 898 >gi|331230449|ref|XP_003327889.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306879|gb|EFP83470.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 299 Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 38/137 (27%), Gaps = 19/137 (13%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEVH---DEKIKALEV----IIEKANAAPIIV 73 ++ + + V QL N ++EK KI L + N A ++ Sbjct: 156 DSSHFFGELVNLRQLCNHPALIEKEKGTGGYFWNQSSKIVHLLKDLSLFLASGNQARAVI 215 Query: 74 AYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 F L + + + + + +L A + G G Sbjct: 216 FSEFKRFLQIIEIALNERGIQFTTHYGKMDNDTRRKNLEYFRRDVSCKVLLATIKTAGVG 275 Query: 123 LNLQYGGNILVFFSLWW 139 ++L + + Sbjct: 276 IDL-RCAHKVYLMLEDQ 291 >gi|327409943|ref|YP_004347363.1| putative helicase [Lausannevirus] gi|326785117|gb|AEA07251.1| putative helicase [Lausannevirus] Length = 587 Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 14/124 (11%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-------DPCTIQEWNEG 107 KI+ ++ II+ NA +I + H +S + G I E+ G Sbjct: 470 KIEHIQEIIKDENAHVLIFSSHESSFEGVERILNEMGIKFGMIKGHKSVRERVIAEFMTG 529 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 K+ ++ + G++LQ ++++ + I R + R ++ G V V Sbjct: 530 KLRVVLVNAKFNASGIDLQKANHVVLLH-------AMKDYIRRQAIGRAQRLGRNEPVLV 582 Query: 168 YYLI 171 + + Sbjct: 583 HSFL 586 >gi|168004101|ref|XP_001754750.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] gi|162693854|gb|EDQ80204.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp. patens] Length = 1128 Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 18/128 (14%) Query: 69 APIIVAYHFNSDLA-----------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 IV F + + + +++K + +L Sbjct: 1003 CKAIVFSQFLEHINVIEEQLNGAGIQHVGIYSPMHSMNKMKSLATFRKDPGCTVLVM-DG 1061 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + GL+L + ++ + +W +E V+R + G R V V L + TI+ Sbjct: 1062 TAALGLDLSFVTHVYLMEPIWDG------SVEEQVVSRAHRMGATRPVLVETLAMRGTIE 1115 Query: 178 ELVLQRLR 185 + +L+ L+ Sbjct: 1116 QQMLEYLQ 1123 >gi|118468269|ref|YP_885588.1| SNF2 domain-containing protein [Mycobacterium smegmatis str. MC2 155] gi|118169556|gb|ABK70452.1| SNF2 domain protein [Mycobacterium smegmatis str. MC2 155] Length = 663 Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 50/140 (35%), Gaps = 14/140 (10%) Query: 54 EKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQK------AFPQGRTLDKDPCTIQEWN 105 K+ L +I + N A ++V HF L ++K P ++ + + Sbjct: 501 AKLDRLIELISEAHINGARVVVLSHFPGVLETIRKALPGTVFGPLDESVPDRQAMLDAFA 560 Query: 106 EGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + P L A L + + + Q ER + R ++ Sbjct: 561 TARGPATLLAQLDVGPLDLRRLSMPLVAIVTEP-----QWQPRAERRMIGRTQRLSDLHT 615 Query: 165 VFVYYLIAQNTIDELVLQRL 184 V V+ L+A+ +IDE + + Sbjct: 616 VRVHRLLARGSIDEPIRRLA 635 >gi|296163999|ref|ZP_06846624.1| helicase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900651|gb|EFG80032.1| helicase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 1750 Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 42/100 (42%), Gaps = 8/100 (8%) Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + +L G G+N+Q L + W + +Q RI + + Sbjct: 1329 GDVSVLIGSTEKIGAGVNVQARAAALHHVDVPWRPRDLEQREGRIQRQGNQNLDG---ID 1385 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK-ETIHV 205 ++ + + + D ++ Q+++ K+ L + +++ E + + Sbjct: 1386 IFIYVTEGSYDTVMWQKVQAKT----LFIEQMRRNEVLDI 1421 >gi|256960869|ref|ZP_05565040.1| conserved hypothetical protein [Enterococcus faecalis Merz96] gi|256951365|gb|EEU67997.1| conserved hypothetical protein [Enterococcus faecalis Merz96] Length = 2586 Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + G++ +L A G G N+Q W + +Q Sbjct: 2183 FIHDANTETQKAELFAKVRRGQVRVLIGSTAKMGAGTNVQNRIVASHDLDCPWRPADLEQ 2242 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R RQ +V ++ + + T D + K ++ + Sbjct: 2243 RAGR----SLRQGNMNASVKMFKYVTKGTFDAYNWGLVENKQKFIGQIMTS 2289 >gi|307267227|ref|ZP_07548731.1| helicase domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306917751|gb|EFN48021.1| helicase domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 903 Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 9/120 (7%) Query: 90 QGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 G K I++ + + + GLNLQ G ++ L W+ +Q Sbjct: 734 NGIYERKSKEEIKQMVKRHELRILVGTDAASEGLNLQTLGTLIN-LDLPWNPTRLEQRKG 792 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS----TIQDLLLNALKKETIHV 205 RI Q V++Y + + ++++ V Q L + + + + L+ +HV Sbjct: 793 RIQRIGQV----YDKVYIYNMRYKGSVEDRVHQLLSQRLANIYDMFGQIPDVLEDVWVHV 848 >gi|326204934|ref|ZP_08194787.1| SNF2-related protein [Clostridium papyrosolvens DSM 2782] gi|325984983|gb|EGD45826.1| SNF2-related protein [Clostridium papyrosolvens DSM 2782] Length = 1125 Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 7/134 (5%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 +EV KI E + +FN + + ++ + + Sbjct: 580 QEVIKGKIVVFTKYEETFTKYKEVFEVYFNQECCAFFNKKM---STEELELNVFRFQNDT 636 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 + S G G N Q + ++ L WD +Q I R+ + ++V +Y Sbjct: 637 SCFIMLCDESGGEGRNFQ-CADSVLHIDLPWDANAIEQRIGRLDRIGRDLNRDVKSVVIY 695 Query: 169 YLIAQNTIDELVLQ 182 +TI+E + + Sbjct: 696 ---THDTIEEQLFR 706 >gi|170042657|ref|XP_001849034.1| rothmund-thomson syndrome DNA helicase recq4 [Culex quinquefasciatus] gi|167866161|gb|EDS29544.1| rothmund-thomson syndrome DNA helicase recq4 [Culex quinquefasciatus] Length = 1527 Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 50/161 (31%), Gaps = 19/161 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC 99 + Y + E ++ ++ + A A + + + G + Sbjct: 1055 IVYCTRRDECERISGFLRTCFQDAQRESEAKEGAASKKRKRVNYTAEPYHAGMPSSRRRT 1114 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + G++ ++ A A ++ +++ + E + Q + R + Sbjct: 1115 IQNAFMSGELRIVVATIAFGMGINK--SDIRAIIHYNMPRNFESYVQEVGR-----AGRD 1167 Query: 160 GFKRAVFVY------------YLIAQNTIDELVLQRLRTKS 188 G V+ I N+ID V+++L K Sbjct: 1168 GKPSHCHVFLDNKGGDRNELRRHIYANSIDRHVIRKLLQKI 1208 >gi|237716188|ref|ZP_04546669.1| DNA methylase N-4/N-6 domain-containing protein [Bacteroides sp. D1] gi|262407797|ref|ZP_06084345.1| DNA methylase N-4/N-6 domain-containing protein [Bacteroides sp. 2_1_22] gi|294644813|ref|ZP_06722556.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CC 2a] gi|229443835|gb|EEO49626.1| DNA methylase N-4/N-6 domain-containing protein [Bacteroides sp. D1] gi|262354605|gb|EEZ03697.1| DNA methylase N-4/N-6 domain-containing protein [Bacteroides sp. 2_1_22] gi|292639846|gb|EFF58121.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CC 2a] Length = 839 Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 44/110 (40%), Gaps = 8/110 (7%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++ I ++ G++ L A P G GLN QY + + F +++ Sbjct: 345 YGSQDDEEADKVIADFKNGRLKYLAAKPEMLGEGLNFQYHCHKAIMFI------DYRFND 398 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + + R + K V +Y + A++ + + + K +++ + Sbjct: 399 KFQAIARIYRFMQKHPVDLYLVYAES--EGEIFKSFMQKWAQHREMVSKM 446 >gi|148825511|ref|YP_001290264.1| ATP-dependent helicase HepA [Haemophilus influenzae PittEE] gi|189029417|sp|A5UAT0|RAPA_HAEIE RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|148715671|gb|ABQ97881.1| ATP-dependent helicase HepA [Haemophilus influenzae PittEE] Length = 923 Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 392 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDFL 451 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I V + ++ + + I+ Sbjct: 452 KLHRDEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAAAYFADLENGAQ 511 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V +Y Sbjct: 512 VLLSSSIGSEGRNFQFAANLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQIYMPC 565 Query: 172 AQNT 175 A+++ Sbjct: 566 AKDS 569 >gi|284504412|ref|YP_003407127.1| zinc finger protein [Marseillevirus] gi|282935850|gb|ADB04165.1| zinc finger protein [Marseillevirus] Length = 587 Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 8/130 (6%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI 101 + +H +E+ K I+ ++ D +R+ +G+ K I Sbjct: 465 MTKMEHIEELVKNAEKKGMSILIFSSHEDTFRGLKNLLDTSRINYRMVKGQKSVK-EKII 523 Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + G+I +L + G++LQ ++++ S+ ++ I+R V R ++ G Sbjct: 524 AAYMAGEIRVLLMNATHNASGIDLQRTTDVVLMHSV-------EEHIKRQVVGRAQRLGR 576 Query: 162 KRAVFVYYLI 171 K V V+ + Sbjct: 577 KGRVRVHTFV 586 >gi|328769991|gb|EGF80034.1| hypothetical protein BATDEDRAFT_25649 [Batrachochytrium dendrobatidis JAM81] Length = 1514 Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 41/117 (35%), Gaps = 8/117 (6%) Query: 75 YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 + A+ G+T ++ + G++ ++ A A ++ Sbjct: 1054 AQYLRVRDFDADAYHAGKTPEQREYVQSRFQHGRLRIIVATVAFGLGINK--QNVRSVIH 1111 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQA-----GFKRAVFVYYLIAQNTIDEL-VLQRLR 185 +S+ +E++ Q I R G + + V + + +DE + + L+ Sbjct: 1112 YSMPRSIEDYMQEIGRSGRNGEPAYCNLFLVQEDYVKHRSFVFSDGVDEAGIWRLLK 1168 >gi|301169332|emb|CBW28931.1| RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor) [Haemophilus influenzae 10810] Length = 923 Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 392 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDFL 451 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I V + ++ + + I+ Sbjct: 452 KLHRDEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAAAYFADLENGAQ 511 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V +Y Sbjct: 512 VLLSSSIGSEGRNFQFAANLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQIYMPC 565 Query: 172 AQNT 175 A+++ Sbjct: 566 AKDS 569 >gi|145635745|ref|ZP_01791439.1| ATP-dependent helicase HepA [Haemophilus influenzae PittAA] gi|145267009|gb|EDK07019.1| ATP-dependent helicase HepA [Haemophilus influenzae PittAA] Length = 923 Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 392 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDFL 451 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I V + ++ + + I+ Sbjct: 452 KLHRDEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAAAYFADLENGAQ 511 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V +Y Sbjct: 512 VLLSSSIGSEGRNFQFAANLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQIYMPC 565 Query: 172 AQNT 175 A+++ Sbjct: 566 AKDS 569 >gi|269957121|ref|YP_003326910.1| helicase domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269305802|gb|ACZ31352.1| helicase domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 1041 Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 29/90 (32%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F + A A +D +N P + + G++ + + +V + Sbjct: 839 PFQARFALRYGARFGDNADVRDGQVRAAFNSPFAPFVLVSTSVGQEGIDFHWWCHAVVHW 898 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 +L + + +Q R+ AV Sbjct: 899 NLPRNPVDFEQREGRVNRFAGHAIRRNVAV 928 >gi|330990113|ref|ZP_08314093.1| Modification methylase TaqI [Gluconacetobacter sp. SXCC-1] gi|329762801|gb|EGG79265.1| Modification methylase TaqI [Gluconacetobacter sp. SXCC-1] Length = 1696 Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 4/103 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + N G+ +L A+ G G+N Q L + W + + Q Sbjct: 1327 FMQHYKKSAAKQRLFADLNSGRRRILIGSTATMGTGVNAQQRLKALHHLDVPWLVADIIQ 1386 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 RI Q + +Y + ++D Q L K Sbjct: 1387 REGRIER----QGNQNDEIEIYAYAQKGSVDATNWQMLERKQR 1425 >gi|302892967|ref|XP_003045365.1| hypothetical protein NECHADRAFT_106221 [Nectria haematococca mpVI 77-13-4] gi|256726290|gb|EEU39652.1| hypothetical protein NECHADRAFT_106221 [Nectria haematococca mpVI 77-13-4] Length = 1446 Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 33/103 (32%), Gaps = 7/103 (6%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 + + IQ +N + L G G+NL + + +L Sbjct: 1188 HIRSAHPMAERVKAIQAFNNPNEDVGALITTFQLAGFGINLHGACHHGIIVEYPQNLSTI 1247 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 I R+ + G +V L +N+ D + R+ K Sbjct: 1248 LHAIGRLW-----RLGQTNSVKPDILYQRNSFDAYQISRMAQK 1285 >gi|116753548|ref|YP_842666.1| Hef nuclease [Methanosaeta thermophila PT] gi|116664999|gb|ABK14026.1| DEAD/DEAH box helicase domain protein [Methanosaeta thermophila PT] Length = 749 Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 10/123 (8%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + + + +G + K ++++ G+ +L A + G+++ ++++F+ Sbjct: 393 VRFVGQASRENDEGLSQRKQSEILEKFRAGEYNVLIAT-SVGEEGIDIPST-DMVLFYEP 450 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q R G R + V LIA+ T DE K L Sbjct: 451 VPSEIRSIQRKGRTGRARTGR--------VVVLIAKGTRDEAYYWISDRKERTMRRQLQG 502 Query: 198 LKK 200 + + Sbjct: 503 MAE 505 >gi|296391314|ref|ZP_06880789.1| DEAD/DEAH box helicase [Pseudomonas aeruginosa PAb1] Length = 174 Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + I +L +P GL+L + F +++ Q R Sbjct: 52 RREDWILDQVDRGIDVLITNPELVKTGLDLLDF-PTIAFLQTGYNVYTLQ-----QAARR 105 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K V V + + LQ + K + L++L ++ V Sbjct: 106 SWRIGQKHPVRVVFFGYAGSSQITCLQLMAKKIAVAQSTSGDVPESGLDSLNQDGDSV 163 >gi|255080480|ref|XP_002503820.1| SNF2 super family [Micromonas sp. RCC299] gi|226519087|gb|ACO65078.1| SNF2 super family [Micromonas sp. RCC299] Length = 1445 Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 8/109 (7%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 D F + + N+ + + G G++ G++++F L Sbjct: 701 DDANLPYIRFDGSTPGQERDAGCDRFKNDDNCRVALVSVTAGGVGIDF-SRGSVVIFVEL 759 Query: 138 WWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 L + R + G V VYYL+A+ + +RL + Sbjct: 760 P--LAHLVE----QAEDRVHRQGVADPVTVYYLVARGAGEWHDRKRLES 802 >gi|224008246|ref|XP_002293082.1| Hypothetical protein THAPSDRAFT_263934 [Thalassiosira pseudonana CCMP1335] gi|220971208|gb|EED89543.1| Hypothetical protein THAPSDRAFT_263934 [Thalassiosira pseudonana CCMP1335] Length = 434 Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 10/101 (9%) Query: 91 GRTLDKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++++ I L + G GL L + ++F L W Sbjct: 339 SVPPADRALRVRKFQTNDSIRLAILSMTAAGVGLTLTA-ASSIIFTELHWVPGVL----- 392 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQN---TIDELVLQRLRTK 187 R + G AV + Y I ++ ++D + L K Sbjct: 393 AQAEDRCHRIGQVNAVNIMYAICKDEDVSVDRSLWAMLGRK 433 >gi|115387363|ref|XP_001211187.1| hypothetical protein ATEG_02009 [Aspergillus terreus NIH2624] gi|114195271|gb|EAU36971.1| hypothetical protein ATEG_02009 [Aspergillus terreus NIH2624] Length = 1162 Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 1/67 (1%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 E +L + G GLNL + + WW Q I+R+ Q Sbjct: 1087 RKKASTSQTEPSPQVLLISLRAGGVGLNLTT-ASNVFMMDPWWSFAIEAQAIDRVHRMGQ 1145 Query: 157 RQAGFKR 163 + + Sbjct: 1146 LRDIRSK 1152 >gi|16119916|ref|NP_396621.1| SNF2 family helicase [Agrobacterium tumefaciens str. C58] gi|15163586|gb|AAK91062.1| helicase, SNF2 family [Agrobacterium tumefaciens str. C58] Length = 1693 Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 11/138 (7%) Query: 67 NAAPIIVAYHFNSD----LARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASC 119 AY + D L + K + + G + L + Sbjct: 1312 EKTRGFSAYRWIRDELIRLGVPASQIAFMQDFKKSEAKQRLFGDVRAGSVRFLIGSSETM 1371 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+N Q L + W + +Q RI Q V ++ + ++D Sbjct: 1372 GTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVR----QGNQHDEVDIFAYATEGSLDAT 1427 Query: 180 VLQRLRTKSTIQDLLLNA 197 + Q K+ L+ Sbjct: 1428 MWQNNERKARFIAAALSG 1445 >gi|254173751|ref|ZP_04880423.1| Type III restriction enzyme, res subunit family [Thermococcus sp. AM4] gi|214032443|gb|EEB73273.1| Type III restriction enzyme, res subunit family [Thermococcus sp. AM4] Length = 807 Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 76/218 (34%), Gaps = 35/218 (16%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 R L+ + ++ + + ++ V E ++ + + ++K Sbjct: 313 RSYLKKLREDRSKSGRELMEDPRMRKVTYLLVQAKELGLDHPKMEKLKELIRKQLQKKPD 372 Query: 69 APIIVAYHFN------------------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + IIV ++ + + + +G + + + ++ G+ Sbjct: 373 SKIIVFTNYRDTGKKIVEELQEMGISAERFIGQASRGRDRGMSQREQKEVLDRFSRGEFN 432 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + GL++ +++VF+ + R+ + G R V L Sbjct: 433 VLVAT-SVGEEGLDVPEV-DLVVFYEPVPSAIRS--------IQRRGRTGRHRPGKVVIL 482 Query: 171 IAQNTIDELVLQRLRTKST-IQDLL------LNALKKE 201 +A+ T DE R K + + + L +L++E Sbjct: 483 MAKGTRDEAYYWSSRRKEKGMFEAIRKVARELESLERE 520 >gi|86359839|ref|YP_471730.1| DNA methylase [Rhizobium etli CFN 42] gi|86283941|gb|ABC93003.1| probable DNA methylase [Rhizobium etli CFN 42] Length = 1699 Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 11/138 (7%) Query: 67 NAAPIIVAYHFNSD----LARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASC 119 + AY + D L + K + + GKI L + Sbjct: 1313 EKSRGFSAYRWIRDELVRLGVPASEIAFMQDYKKTEAKQRLFADVRAGKIRFLIGSSDTM 1372 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+N Q L + W + +Q RI Q V ++ Q ++D Sbjct: 1373 GTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVR----QGNQHDEVDIFAYATQGSLDAS 1428 Query: 180 VLQRLRTKSTIQDLLLNA 197 + Q K+ L+ Sbjct: 1429 MWQNNERKARFIAAALSG 1446 >gi|319945388|ref|ZP_08019649.1| helicase domain protein [Lautropia mirabilis ATCC 51599] gi|319741381|gb|EFV93807.1| helicase domain protein [Lautropia mirabilis ATCC 51599] Length = 945 Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 6/98 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ + E + +L G+NLQ+ +V + L W+ H+Q RI Sbjct: 521 TPEERRERVGSLEEAESRILV-TTDCLSEGINLQHLFTAVVHYDLTWNPTRHEQREGRID 579 Query: 153 VTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKST 189 Q V L ++ +D VL + K+ Sbjct: 580 RFGQ----QAEEVRCTMLYGEDNPVDGFVLNVILRKAE 613 >gi|319775342|ref|YP_004137830.1| RNA polymerase-associated helicase protein [Haemophilus influenzae F3047] gi|317449933|emb|CBY86145.1| RNA polymerase-associated helicase protein [Haemophilus influenzae F3047] Length = 923 Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 392 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDFL 451 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I V + ++ + + I+ Sbjct: 452 KLHRDEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAAAYFADLENGAQ 511 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V +Y Sbjct: 512 VLLSSSIGSEGRNFQFAANLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQIYMPC 565 Query: 172 AQNT 175 A+++ Sbjct: 566 AKDS 569 >gi|319897783|ref|YP_004135980.1| RNA polymerase-associated helicase protein [Haemophilus influenzae F3031] gi|317433289|emb|CBY81664.1| RNA polymerase-associated helicase protein [Haemophilus influenzae F3031] Length = 923 Score = 42.4 bits (98), Expect = 0.042, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 392 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDFL 451 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I V + ++ + + I+ Sbjct: 452 KLHRDEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAAAYFADLENGAQ 511 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V +Y Sbjct: 512 VLLSSSIGSEGRNFQFAANLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQIYVPC 565 Query: 172 AQNT 175 A+++ Sbjct: 566 AKDS 569 >gi|170291163|ref|YP_001737979.1| type III restriction protein res subunit [Candidatus Korarchaeum cryptofilum OPF8] gi|170175243|gb|ACB08296.1| type III restriction protein res subunit [Candidatus Korarchaeum cryptofilum OPF8] Length = 492 Score = 42.4 bits (98), Expect = 0.042, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 59/185 (31%), Gaps = 27/185 (14%) Query: 5 HKFQRELYCDLQGEN---IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 + REL+ + IE + K ++ + +EV D K+ Sbjct: 312 REMSRELFLARNDDERKLIEKKYALKAKNKIREV---------LRIMEEVKDRKVLIFTE 362 Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I++A + R + G+T + + G+I ++ Sbjct: 363 YIDQAEEI-------YRELRKRYKVELMIGKTSG-RSEIFERFKRGEINVIVTTRVL--D 412 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 ++ + S + Q + R+ + + VY ++ + TI+E + Sbjct: 413 EGIDVPDADVAIIVSGSGSRRQMAQRVGRV-----VRGAPGKVADVYEIVTRGTIEEKLS 467 Query: 182 QRLRT 186 + R Sbjct: 468 RVRRR 472 >gi|328722411|ref|XP_001942510.2| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like [Acyrthosiphon pisum] Length = 577 Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 6/73 (8%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 I L + GLNL + F + + E + + G + FV Sbjct: 484 NINALLVKLSVGSKGLNLTE-ATRIFFMDPIINKAD-----EHQAIGTIHRLGQTKPTFV 537 Query: 168 YYLIAQNTIDELV 180 + I +++I+E + Sbjct: 538 HNFIIRDSIEENI 550 >gi|309972648|gb|ADO95849.1| ATP-dependent helicase HepA [Haemophilus influenzae R2846] Length = 923 Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 392 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDFL 451 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I V + ++ + + I+ Sbjct: 452 KLHRDEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAAAYFADLENGAQ 511 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V +Y Sbjct: 512 VLLSSSIGSEGRNFQFAANLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQIYVPC 565 Query: 172 AQNT 175 A+++ Sbjct: 566 AKDS 569 >gi|240103224|ref|YP_002959533.1| Hef nuclease [Thermococcus gammatolerans EJ3] gi|239910778|gb|ACS33669.1| Hef, Helicase-associated endonuclease for fork-structured DNA (Hef) [Thermococcus gammatolerans EJ3] Length = 801 Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 77/214 (35%), Gaps = 39/214 (18%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA-- 66 R L+ + ++ + + ++ +Y + + K++ L+ +I+K Sbjct: 299 RNYLKKLREDRSKSSRELMEDPRMRKV----IYLLVQAKELGLDHPKMEKLKDLIKKQLE 354 Query: 67 --NAAPIIVAYHFN------------------SDLARLQKAFPQGRTLDKDPCTIQEWNE 106 + IIV ++ + + + +G + + + ++ Sbjct: 355 RKPDSKIIVFTNYRDTGKKIVEELRNLGVSAERFIGQASRGTDRGMSQKEQKEVLDRFSR 414 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G+ +L A + GL++ +++VF+ + R+ + G R Sbjct: 415 GEFNVLVAT-SVGEEGLDVPEV-DLVVFYEPVPSAIRS--------IQRRGRTGRHRPGK 464 Query: 167 VYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 V L+A+ T DE R K + +A+K+ Sbjct: 465 VVILMAKGTRDEAYYWSSRRKEK---GMFDAIKR 495 >gi|158421530|ref|YP_001527757.1| helicase domain-containing protein [Deinococcus geothermalis DSM 11300] gi|158342773|gb|ABW35059.1| helicase C-domain related protein [Deinococcus geothermalis DSM 11300] Length = 678 Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 4/99 (4%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + G+ ++ + + G G+NLQ+G L+ + W+ QQ + Sbjct: 230 QTCPESEDRLRVSNGLKSGQYQVVIGNTGTMGQGINLQHGVANLLHLDVPWNPAVWQQRV 289 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 R+ + F L + +D+ + LR K Sbjct: 290 GRVVRQGNTEKHINNKTF---LGTRG-LDKDMYDTLRGK 324 >gi|329122661|ref|ZP_08251240.1| RNA polymerase-associated protein RapA [Haemophilus aegyptius ATCC 11116] gi|327472675|gb|EGF18104.1| RNA polymerase-associated protein RapA [Haemophilus aegyptius ATCC 11116] Length = 923 Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 392 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDFL 451 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I V + ++ + + I+ Sbjct: 452 KLHRDEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAAAYFADLENGAQ 511 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V +Y Sbjct: 512 VLLSSSIGSEGRNFQFAANLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQIYVPC 565 Query: 172 AQNT 175 A+++ Sbjct: 566 AKDS 569 >gi|224072879|ref|XP_002303924.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222841356|gb|EEE78903.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1333 Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 53/153 (34%), Gaps = 16/153 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRT 93 ++ V ++ + +A +I+ F + +++ Sbjct: 1140 DKDTQISVSSLVLQQDCFSVNRAAMEKVIIFSQFLEHIHVIEQQLAFAGIKFAGMYSPMP 1199 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ + + S GL+L + ++ + +W + +E + Sbjct: 1200 QINKMKSLATFQHDATCMALLMDGSAALGLDLSFVTHVFLMEPIWD------RSMEEQVI 1253 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 +R + G R + V L + TI+E +L+ L+ Sbjct: 1254 SRAHRMGATRPINVETLAMRGTIEEQMLEFLQD 1286 >gi|66358816|ref|XP_626586.1| DEXDc+HELICc'DEXDc+HELICc' [Cryptosporidium parvum Iowa II] gi|46227709|gb|EAK88629.1| DEXDc+HELICc'DEXDc+HELICc' [Cryptosporidium parvum Iowa II] Length = 1476 Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 53/165 (32%), Gaps = 6/165 (3%) Query: 31 KCLQLANGAVYYDEEKHWKE---VHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K + + D E++ K + + L+ + I + + + + Sbjct: 1219 KLRYIL-HCILKDIEENPKIKIMIVSSLWQQLDFLYYTLTILFNIGTCRYYPHIPKSELQ 1277 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 D IQE N P+L HGL+L + + D Q Sbjct: 1278 RSISNFKKDDSNNIQEINNKF-PVLLLSIDIGSHGLDL-SCVSNIYILDPISDESIENQT 1335 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQD 192 I R R V V Y + Q+T ++++ ++ K I Sbjct: 1336 ISRAYRIRSNNITSSSFVKVKYCLIQDTFEDILYDYIQYKRFIFQ 1380 >gi|319935365|ref|ZP_08009803.1| helicase domain-containing protein [Coprobacillus sp. 29_1] gi|319809773|gb|EFW06174.1| helicase domain-containing protein [Coprobacillus sp. 29_1] Length = 3184 Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +T + + +GK+ ++ + G G N+Q L W + +Q Sbjct: 2814 HIHIAKTEKQKQDLFSKVRQGKVRVINGSTSKMGAGTNIQDRLVALHDLDCPWRPRDLEQ 2873 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q +Y + + T D + Q + K T + + Sbjct: 2874 RHGRIAR----QGNLNSEASIYTYVTEGTFDSYLYQTIEKKQTFISQVFTS 2920 >gi|323526321|ref|YP_004228474.1| SNF2-like protein [Burkholderia sp. CCGE1001] gi|323383323|gb|ADX55414.1| SNF2-related protein [Burkholderia sp. CCGE1001] Length = 769 Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 38/115 (33%), Gaps = 6/115 (5%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + +K + + E ++ +P GL+L + F +++ Q Sbjct: 641 SVSAEKREDWVADQLERGADVIITNPELVKTGLDLLEF-PTIAFLQSGYNVYTLQ----- 694 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R + G V V +L + T L+ + K + + + + + Sbjct: 695 QAARRSWRIGQTLDVTVRFLGYEGTAQMRCLKLMAQKIAVSQSTSGDMPESGLDI 749 >gi|222108974|ref|YP_002551240.1| SNF-2-family methyltransferase [Agrobacterium radiobacter K84] gi|221727896|gb|ACM30946.1| SNF-2-family methyltransferase [Agrobacterium radiobacter K84] Length = 1693 Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 41/138 (29%), Gaps = 11/138 (7%) Query: 67 NAAPIIVAYHFNSD----LARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASC 119 AY + D L + K + + GK+ L + Sbjct: 1312 EKTRGFSAYRWIRDELIRLGVPASEIAFMQDFKKSEAKQRLFGDVRAGKVRFLIGSSETM 1371 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+N Q L + W + +Q RI Q V ++ + ++D Sbjct: 1372 GTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVR----QGNQHDEVDIFAYATEGSLDAT 1427 Query: 180 VLQRLRTKSTIQDLLLNA 197 + Q K+ L+ Sbjct: 1428 MWQNNERKARFIAAALSG 1445 >gi|172055090|ref|YP_001806417.1| hypothetical protein cce_5005 [Cyanothece sp. ATCC 51142] gi|171701371|gb|ACB54351.1| hypothetical protein cce_5005 [Cyanothece sp. ATCC 51142] Length = 961 Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 6/96 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + D+ + E +L A G+NLQ N L ++ +Q RI Sbjct: 547 SEDEREIRLDELKSYSQRVLVAT-DCLSEGINLQEHFNACCHVDLPFNPNRLEQREGRID 605 Query: 153 VTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTK 187 Q V L Q+ +D +LQ L K Sbjct: 606 RYGQANP----DVKCILLYGQDNPVDGAILQVLLRK 637 >gi|16272558|ref|NP_438774.1| ATP-dependent helicase HepA [Haemophilus influenzae Rd KW20] gi|260581430|ref|ZP_05849243.1| RNA polymerase-associated protein rapA [Haemophilus influenzae RdAW] gi|260583227|ref|ZP_05851005.1| RNA polymerase-associated protein rapA [Haemophilus influenzae NT127] gi|1170244|sp|P44781|RAPA_HAEIN RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|1573610|gb|AAC22275.1| ATP-dependent helicase (hepA) [Haemophilus influenzae Rd KW20] gi|260091924|gb|EEW75874.1| RNA polymerase-associated protein rapA [Haemophilus influenzae RdAW] gi|260093729|gb|EEW77639.1| RNA polymerase-associated protein rapA [Haemophilus influenzae NT127] Length = 923 Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 392 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDFL 451 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I V + ++ + + I+ Sbjct: 452 KLHRNEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAAAYFADLENGAQ 511 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V VY Sbjct: 512 VLLSSSIGSEGRNFQFAANLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQVYVPC 565 Query: 172 AQNT 175 A+++ Sbjct: 566 AKDS 569 >gi|254524289|ref|ZP_05136344.1| ATP-dependent helicase HepA [Stenotrophomonas sp. SKA14] gi|219721880|gb|EED40405.1| ATP-dependent helicase HepA [Stenotrophomonas sp. SKA14] Length = 929 Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 7/126 (5%) Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGR-TLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 + VA H + R G T ++ + + + +L A G Sbjct: 482 CRYIGTAHYVAEHLKATFPRATVDAVTGELTPEERRERVDGLEDAEQRILVAT-DCLSEG 540 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-IDELVL 181 +NLQ+ +V + L W+ H+Q R+ Q V L Q+ +D VL Sbjct: 541 INLQHLFTAVVHYDLAWNPTRHEQREGRVDRFGQ----QADEVRCTMLYGQDNPVDGFVL 596 Query: 182 QRLRTK 187 + K Sbjct: 597 NVILKK 602 >gi|330962838|gb|EGH63098.1| SNF2-related:helicase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 70 Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 23/51 (45%) Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 R + G R V V +A +TID+ + Q L K + L++ +E Sbjct: 10 QAEDRAYRNGQLRLVVVKIPLADDTIDQQLWQMLMDKRALASDLIDPEAEE 60 >gi|224122872|ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222857313|gb|EEE94860.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2283 Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats. Identities = 20/202 (9%), Positives = 57/202 (28%), Gaps = 42/202 (20%) Query: 29 TVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI-IEKANAAPIIVAYHF---------- 77 + C + + + D K + I I+ + ++ F Sbjct: 844 LISCRKCCDHPYIMNPSLQISLTKDRKEADILDIGIKASGKLQLLGEMLFSIKERGLRAL 903 Query: 78 -----------------------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGK--IPLL 112 + + + ++ +N + + Sbjct: 904 VLFQSSGGSGKDNIGDILDDFVRQRFGQGSYERVDEHVLPSRKQSALKFFNNHQEGRFVF 963 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 +C + L + ++ F+ W+ + +++I + + ++ L + Sbjct: 964 LLETRACSSSIKL-SSVDTVIIFASDWNPMTDIRSLQKITLH-----SQFDQINIFRLYS 1017 Query: 173 QNTIDELVLQRLRTKSTIQDLL 194 T++E VL R T++ L Sbjct: 1018 SCTVEEKVLIIARQDKTLESSL 1039 >gi|282900077|ref|ZP_06308034.1| hypothetical protein CRC_01468 [Cylindrospermopsis raciborskii CS-505] gi|281194959|gb|EFA69899.1| hypothetical protein CRC_01468 [Cylindrospermopsis raciborskii CS-505] Length = 964 Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 4/105 (3%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ D+ + E +L A G+NLQ + ++ + L W+ +Q RI Sbjct: 533 QSEDEREVRLNELKSYPQRILVAT-DCLSEGINLQSHFSAVIHYDLPWNPNRLEQREGRI 591 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 Q A ++ +Y N +D VL+ L K+ L Sbjct: 592 DRYGQI-ATQVKSCLLY--GQDNPVDGAVLEVLIRKAVQIHKTLG 633 >gi|190344637|gb|EDK36353.2| hypothetical protein PGUG_00451 [Meyerozyma guilliermondii ATCC 6260] Length = 1002 Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 8/92 (8%) Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +++E+ + I + + GL L + + Q I RI Sbjct: 840 DSVEEFKDPSNNITCFLLNAKAQASGLTL-INATHIFLCEPLVNASLELQAISRI----- 893 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + G + V+ +NT++E +L K Sbjct: 894 HRIGQTKVTTVWLFAIENTVEESILLMSTNKR 925 >gi|327309686|ref|XP_003239534.1| hypothetical protein TERG_01519 [Trichophyton rubrum CBS 118892] gi|326459790|gb|EGD85243.1| hypothetical protein TERG_01519 [Trichophyton rubrum CBS 118892] Length = 309 Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 7/86 (8%) Query: 92 RTLDKDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 ++ + +Q + + L GLNLQ +V FS Sbjct: 140 PSVSEREHLVQAFTTDPERVMVLVCSYNVSSTGLNLQKLCRNVVIFSPPTSKASQD---- 195 Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNT 175 + R ++ G V VY + +++ Sbjct: 196 -QAIGRVKRLGQTHVVHVYEIRVRDS 220 >gi|116074313|ref|ZP_01471575.1| hypothetical protein RS9916_37722 [Synechococcus sp. RS9916] gi|116069618|gb|EAU75370.1| hypothetical protein RS9916_37722 [Synechococcus sp. RS9916] Length = 516 Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 45/167 (26%), Gaps = 29/167 (17%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + RE E + + ++ + K+ E ++ Sbjct: 323 YRQRVREGLVRSDAE------AFAVLTALRRI---------------GAEFKLPEAEQLL 361 Query: 64 E--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-----DPCTIQEWNEGKIPLLFAHP 116 + +A +++ F L LQ+ + + + G LLFA Sbjct: 362 QSLRAQQQSVVLFSGFVGPLELLQQRIGGELLTGRLKPGERQAVVDRFQAGDNDLLFATY 421 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + G G L +V W + Q +R Sbjct: 422 GAGGLGFTLHR-ARQVVLLERPWTPGDVDQAEDRCHRLGMDGGLTSH 467 >gi|26351187|dbj|BAC39230.1| unnamed protein product [Mus musculus] gi|26351189|dbj|BAC39231.1| unnamed protein product [Mus musculus] Length = 577 Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats. Identities = 19/199 (9%), Positives = 46/199 (23%), Gaps = 50/199 (25%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVY-------------------- 41 + Y KF ++ +E + ++ +L + Sbjct: 380 EIYRKFV--SLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACRLLNLGTATFSAQD 437 Query: 42 -------------YDEEKHWKEVHDEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQK 86 K+ L ++E + +V L +++ Sbjct: 438 ENEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIER 497 Query: 87 AFPQGRTL------------DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVF 134 +++ + + G GL L +V Sbjct: 498 LLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTA-ATRVVI 556 Query: 135 FSLWWDLEEHQQMIERIGV 153 F W+ Q ++R+ Sbjct: 557 FDPSWNPATDAQAVDRVYR 575 >gi|14600689|ref|NP_147209.1| hypothetical protein APE_0413 [Aeropyrum pernix K1] gi|5104053|dbj|BAA79369.1| conserved hypothetical protein [Aeropyrum pernix K1] Length = 1039 Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 6/90 (6%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I+ W + G GLNLQY N+++ + + W +Q I R+ + Sbjct: 498 EDIKRWLSEDGRRVLVTTDVAGEGLNLQY-ANVIINYEITWSPIRLEQRIGRVW-----R 551 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 G + +V+ L + +++ V + + K Sbjct: 552 YGQDKTTYVFNLFLADGLEKEVAETVFAKL 581 >gi|119384266|ref|YP_915322.1| helicase domain-containing protein [Paracoccus denitrificans PD1222] gi|119374033|gb|ABL69626.1| helicase domain protein [Paracoccus denitrificans PD1222] Length = 923 Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 6/81 (7%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A G+NLQ + ++ + L W+ HQQ R+ Q V Sbjct: 518 RILVAT-DCLSEGINLQQLFDTVIHYDLSWNPTRHQQREGRVDRFGQPAEL----VRSIM 572 Query: 170 LIAQNT-IDELVLQRLRTKST 189 + + ++ ID VL + K+ Sbjct: 573 MFSPDSAIDGAVLDVILRKAE 593 >gi|145628405|ref|ZP_01784206.1| ATP-dependent helicase HepA [Haemophilus influenzae 22.1-21] gi|144980180|gb|EDJ89839.1| ATP-dependent helicase HepA [Haemophilus influenzae 22.1-21] Length = 699 Score = 42.0 bits (97), Expect = 0.054, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 168 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDFL 227 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I V + ++ + + I+ Sbjct: 228 KLHRDEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAAAYFADLENGAQ 287 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V +Y Sbjct: 288 VLLSSSIGSEGRNFQFAANLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQIYMPC 341 Query: 172 AQNT 175 A+++ Sbjct: 342 AKDS 345 >gi|331251718|ref|XP_003338449.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309317439|gb|EFP94030.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 78 Score = 42.0 bits (97), Expect = 0.054, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 19/49 (38%) Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +E + R + G + V V N+I+ + Q R K+ + Sbjct: 4 TWNPAVEEQAIDRLYRIGQQEKVHVVRYCVTNSIEGHIFQIKRRKAELA 52 >gi|92109757|ref|YP_572043.1| N-6 DNA methylase [Nitrobacter hamburgensis X14] gi|91802839|gb|ABE65211.1| N-6 DNA methylase [Nitrobacter hamburgensis X14] Length = 1700 Score = 42.0 bits (97), Expect = 0.054, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 58/200 (29%), Gaps = 16/200 (8%) Query: 10 ELYCDLQGENIEAFNSASKTV----KCLQLANGAVYYDEEKHWKEVHDEKIKALEVI-IE 64 +L E+ E N + + + Q G Y + E+ + Sbjct: 1253 DLRLVDADEDSEPHNKLNNLISNAIRIWQETAGNAYIRSDGKPFELPGAAQMIFSDLGTI 1312 Query: 65 KANAAPIIVAYHFNSD----LARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPA 117 + AY + D + + K + + GK+ L Sbjct: 1313 SVEKSRGFSAYRWIRDELVRMGVPASEIAFMQDYRKSEAKQRLFGDVRAGKVRFLIGSSD 1372 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 + G G+N Q L + W + +Q RI Q V ++ + ++D Sbjct: 1373 TMGTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVR----QGNQHDEVDIFAYATEGSLD 1428 Query: 178 ELVLQRLRTKSTIQDLLLNA 197 + Q K+ L+ Sbjct: 1429 ATMWQNNERKARFITAALSG 1448 >gi|308455330|ref|XP_003090212.1| hypothetical protein CRE_04419 [Caenorhabditis remanei] gi|308265843|gb|EFP09796.1| hypothetical protein CRE_04419 [Caenorhabditis remanei] Length = 1666 Score = 41.7 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 6/89 (6%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +L + C +GLN+ G N ++F Q I RI Sbjct: 1559 KKIVDFEVSEDVKILLCSLSLCANGLNMT-GANHIIFLDPPHLQSVLNQAIGRI-----N 1612 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + G KRA+ V +L+ + ++D + + + Sbjct: 1613 RFGQKRAMRVIHLVVEGSLDSELREIAKN 1641 >gi|321257181|ref|XP_003193498.1| hypothetical protein CGB_D3680W [Cryptococcus gattii WM276] gi|317459968|gb|ADV21711.1| hypothetical protein CNBD4850 [Cryptococcus gattii WM276] Length = 1656 Score = 41.7 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 18/184 (9%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQL----ANGAVYYDEEKHWKEVHDEKIKALEVIIEK 65 E D+ E E A K + + D + + IK L Sbjct: 1428 EAEEDITPEEQEQMRRAEDLEKLRMMDVERRRAVMMMDMMGEYGSKINFLIKHLLYYKST 1487 Query: 66 ANAAPIIVAYHF-------NSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPA 117 ++ ++ L +F K + ++ + I + H Sbjct: 1488 EPDTRHVIFSNWSDSLNIVMQALRLNGISFASFDQGKKQKDVVDQFLKDESISVFLLHAE 1547 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 GL L ++ + E + R + G ++ V+ +T++ Sbjct: 1548 RESSGLTLTS-CRVVHLLEP-----VLRHSFELQAIGRVDRLGQEKETSVFCYATMDTVE 1601 Query: 178 ELVL 181 +L Sbjct: 1602 SRIL 1605 >gi|308469313|ref|XP_003096895.1| hypothetical protein CRE_24695 [Caenorhabditis remanei] gi|308241310|gb|EFO85262.1| hypothetical protein CRE_24695 [Caenorhabditis remanei] Length = 1658 Score = 41.7 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 6/89 (6%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +L + C +GLN+ G N ++F Q I RI Sbjct: 1551 KKIVDFEVSEDVKILLCSLSLCANGLNMT-GANHIIFLDPPHLQSVLNQAIGRI-----N 1604 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + G KRA+ V +L+ + ++D + + + Sbjct: 1605 RFGQKRAMRVIHLVVEGSLDSELREIAKN 1633 >gi|256079746|ref|XP_002576146.1| snf2 histone linker phd ring helicase [Schistosoma mansoni] gi|238661407|emb|CAZ32381.1| snf2 histone linker phd ring helicase, putative [Schistosoma mansoni] Length = 1587 Score = 41.7 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 6/67 (8%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L +GLNL N ++F Q + RI + G R V+ Sbjct: 1446 ILLMPVQLGANGLNLTS-ANHVLFVDPVLSHAREAQAVARI-----HRIGQTRPGVVHRF 1499 Query: 171 IAQNTID 177 + +++I+ Sbjct: 1500 LVKDSIE 1506 >gi|58039939|ref|YP_191903.1| ATP-dependent helicase HepA [Gluconobacter oxydans 621H] gi|58002353|gb|AAW61247.1| ATP-dependent helicase HepA [Gluconobacter oxydans 621H] Length = 926 Score = 41.7 bits (96), Expect = 0.056, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 5/97 (5%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 D+ I + G+NLQ + +V + L W+ HQQ R+ Sbjct: 501 RDRVSDMIAADETQSNQRILVATDCLSEGINLQQLFDTVVHYDLSWNPTRHQQREGRVDR 560 Query: 154 TRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKST 189 Q V + + ++ +D VL + K+ Sbjct: 561 FGQPAEL----VRSIMMFSPDSAVDGAVLDVILRKAE 593 >gi|293602264|ref|ZP_06684712.1| toprim domain protein [Achromobacter piechaudii ATCC 43553] gi|292819343|gb|EFF78376.1| toprim domain protein [Achromobacter piechaudii ATCC 43553] Length = 758 Score = 41.7 bits (96), Expect = 0.057, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 6/111 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +K + E + I L +P GL++ ++F +++ Q Sbjct: 636 EKREDWVMEQVDRGIDALICNPELVKTGLDMLEF-PTILFMQTGYNVYTLQ-----QAAR 689 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R + G R V V +L Q T LQ + K + + + + Sbjct: 690 RSWRIGQTRDVDVDFLGYQGTAQMRCLQLMAQKIAVSQSTSGDMPDSGLDI 740 >gi|254297090|ref|ZP_04964543.1| ATP-dependent helicase HepA [Burkholderia pseudomallei 406e] gi|157807896|gb|EDO85066.1| ATP-dependent helicase HepA [Burkholderia pseudomallei 406e] Length = 931 Score = 41.7 bits (96), Expect = 0.058, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ + + LL A G+NLQ + +V + L W+ H+Q R+ Sbjct: 502 FPAEERERRVDALGTSERRLLIAT-DCLSEGVNLQEHFDSVVHYDLSWNPTRHEQREGRV 560 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 Q RA +Y A N +D VLQ + K+ Sbjct: 561 DRFGQP-CPRVRATLIY--GANNPVDGAVLQVILRKAE 595 >gi|18978387|ref|NP_579744.1| Hef nuclease [Pyrococcus furiosus DSM 3638] gi|18894225|gb|AAL82139.1| ATP-dependent RNA helicase, putative [Pyrococcus furiosus DSM 3638] Length = 764 Score = 41.7 bits (96), Expect = 0.058, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 75/215 (34%), Gaps = 32/215 (14%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 ++LY + + + +A + + + V E D+ + + +++ Sbjct: 303 KKLYEEAKAGSTKASKEIFSDKRMKKAISLLVQAKEIGLDHPKMDKLKEIIREQLQRKQN 362 Query: 69 APIIVAYHFNSD------------------LARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + IIV ++ + + K +G + + + E+ G+ Sbjct: 363 SKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFN 422 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + GL++ +++VF+ + R+ + G V L Sbjct: 423 VLVAT-SVGEEGLDVPEV-DLVVFYEPVPSAIRS--------IQRRGRTGRHMPGRVIIL 472 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLL----NALKKE 201 +A+ T DE R K I + A+KK+ Sbjct: 473 MAKGTRDEAYYWSSRQKEKIMQETIAKVSQAIKKQ 507 >gi|146422266|ref|XP_001487074.1| hypothetical protein PGUG_00451 [Meyerozyma guilliermondii ATCC 6260] Length = 1002 Score = 41.7 bits (96), Expect = 0.059, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 8/92 (8%) Query: 99 CTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +++E+ + I + + GL L + + Q I RI Sbjct: 840 DSVEEFKDPSNNITCFLLNAKAQASGLTL-INATHIFLCEPLVNASLELQAISRI----- 893 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + G + V+ +NT++E +L K Sbjct: 894 HRIGQTKVTTVWLFAIENTVEESILLMSTNKR 925 >gi|157127702|ref|XP_001661140.1| rothmund-thomson syndrome DNA helicase recq4 [Aedes aegypti] gi|108872839|gb|EAT37064.1| rothmund-thomson syndrome DNA helicase recq4 [Aedes aegypti] Length = 1134 Score = 41.7 bits (96), Expect = 0.059, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 39/115 (33%), Gaps = 9/115 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L + + G + + + G++ ++ A A ++ +++ + Sbjct: 696 LNYFAEPYHAGLSSARRRTIQNAFMSGELRIVVATIAFGMGINK--ADIRAIIHYNMPKN 753 Query: 141 LEEHQQMIERIGVTRQR-------QAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 E + Q + R G K + I N+ID V+++L K Sbjct: 754 FESYVQEVGRAGRDGGVSHCHLFLDNRGKDRNELRRHIYANSIDRHVIRKLLQKI 808 >gi|331250653|ref|XP_003337933.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309316923|gb|EFP93514.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 78 Score = 41.7 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 19/49 (38%) Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +E + R + G + V V N+I+ + Q R K+ + Sbjct: 4 TWNPAVEEQAIDRLYRIGQQEKVHVVRYCVTNSIEGHIFQIKRRKAELA 52 >gi|148238375|ref|YP_001223762.1| SNF2 family DNA/RNA helicase [Synechococcus sp. WH 7803] gi|147846914|emb|CAK22465.1| Superfamily II DNA/RNA helicases, SNF2 family [Synechococcus sp. WH 7803] Length = 502 Score = 41.7 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 63/160 (39%), Gaps = 18/160 (11%) Query: 55 KIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQG-----RTLDKDPCTIQEWNEG 107 K+ A E ++++ A +++ F + L LQ+ + ++ + ++ G Sbjct: 339 KLPAAERLVQQLRAQGESVVLFSSFVAPLVLLQQRLGGALLTGRQKPEERQTAVDQFQAG 398 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 LL A + G G L +V W + R + G + Sbjct: 399 STDLLLATYGAGGLGFTLHR-ARQVVLLERPWTPGDVD-----QAEDRCHRLGMDGELVS 452 Query: 168 YYLIAQNTIDELVLQRLRTKSTIQDLLLN----ALKKETI 203 ++L D+LV + +K++ +LL+ +++++++ Sbjct: 453 HWLQL-GPADQLVDGLVASKASRIELLMGPRRVSVERQSL 491 >gi|145640056|ref|ZP_01795652.1| ATP-dependent helicase HepA [Haemophilus influenzae PittII] gi|145270840|gb|EDK10761.1| ATP-dependent helicase HepA [Haemophilus influenzae PittII] gi|309751620|gb|ADO81604.1| ATP-dependent helicase HepA [Haemophilus influenzae R2866] Length = 923 Score = 41.7 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 392 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDFL 451 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I V + ++ + + I+ Sbjct: 452 KLHRNEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAAAYFADLENGAQ 511 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V +Y Sbjct: 512 VLLSSSIGSEGRNFQFAANLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQIYVPC 565 Query: 172 AQNT 175 A+++ Sbjct: 566 AKDS 569 >gi|242765200|ref|XP_002340926.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] gi|218724122|gb|EED23539.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500] Length = 2138 Score = 41.7 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 3/90 (3%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW--WDLEEHQQMIERIG 152 + + + N ++FF+ + + E+Q I Sbjct: 2011 HGRGKMKKFSANHDKKVAILQLGTENAAGLNLQNANHVIFFAPFAAKNHYEYQSTIA-QS 2069 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 R + G K+ V ++ L NT++ +LQ Sbjct: 2070 SGRVIRFGQKKKVHIWNLATLNTLEVGILQ 2099 >gi|24461733|gb|AAN62302.1|AF440524_89 conserved hypothetical plasmid protein [Pseudomonas aeruginosa] Length = 757 Score = 41.7 bits (96), Expect = 0.065, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 35/110 (31%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 635 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 688 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K AV V YL T L + K + + + + V Sbjct: 689 SWRIGQKLAVRVIYLGYAATSQMTCLALMARKIMVSQSTSGDVPESGLDV 738 >gi|257466249|ref|ZP_05630560.1| helicase [Fusobacterium gonidiaformans ATCC 25563] Length = 2324 Score = 41.7 bits (96), Expect = 0.067, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 4/91 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G++ +L G G N+Q + + W + +Q Sbjct: 2228 FIHEANSDKQKDELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIAMHDLDVPWRPADLEQ 2287 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 RI Q + V +Y + +NT D Sbjct: 2288 RSGRIVR----QGNENKEVSIYRYVTENTFD 2314 >gi|315917407|ref|ZP_07913647.1| superfamily II DNA/RNA helicase [Fusobacterium gonidiaformans ATCC 25563] gi|313691282|gb|EFS28117.1| superfamily II DNA/RNA helicase [Fusobacterium gonidiaformans ATCC 25563] Length = 2332 Score = 41.7 bits (96), Expect = 0.069, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 4/91 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G++ +L G G N+Q + + W + +Q Sbjct: 2236 FIHEANSDKQKDELFAKVRKGEVRILMGSTQKMGAGTNVQNKLIAMHDLDVPWRPADLEQ 2295 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 RI Q + V +Y + +NT D Sbjct: 2296 RSGRIVR----QGNENKEVSIYRYVTENTFD 2322 >gi|163855630|ref|YP_001629928.1| hypothetical protein Bpet1323 [Bordetella petrii DSM 12804] gi|163259358|emb|CAP41658.1| conserved plasmid related protein [Bordetella petrii] Length = 757 Score = 41.7 bits (96), Expect = 0.070, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 31/98 (31%), Gaps = 6/98 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S W R Sbjct: 635 RREDWIAEQLDRGIDVLLTNPELVKTGLDLLEFPTIVFMQSGWNVYTLQ------QAARR 688 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G K AV V YL T L + K + Sbjct: 689 SWRIGQKLAVKVIYLGYAATSQMTCLSLMAKKILVSQS 726 >gi|266625815|ref|ZP_06118750.1| superfamily II DNA and RNA helicase [Clostridium hathewayi DSM 13479] gi|288862282|gb|EFC94580.1| superfamily II DNA and RNA helicase [Clostridium hathewayi DSM 13479] Length = 490 Score = 41.3 bits (95), Expect = 0.072, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 28/89 (31%), Gaps = 4/89 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L A G G N+Q L W + Q Sbjct: 406 FIHEANTEVRKKELFSKVRTGQVRVLLGSTAKMGAGTNVQDRLVALHDLDCPWRPGDLAQ 465 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 RI Q V VY + + T Sbjct: 466 RKGRIER----QGNQNPLVHVYRYVTEGT 490 >gi|227500536|ref|ZP_03930590.1| superfamily II DNA and RNA helicase [Anaerococcus tetradius ATCC 35098] gi|227217364|gb|EEI82693.1| superfamily II DNA and RNA helicase [Anaerococcus tetradius ATCC 35098] Length = 2089 Score = 41.3 bits (95), Expect = 0.072, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 4/91 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G+I +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKRKDELFSKVRRGEIRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 RI Q V ++ + +NT D Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFD 2088 >gi|119714090|ref|YP_919232.1| helicase domain-containing protein [Nocardioides sp. JS614] gi|119525999|gb|ABL79369.1| helicase domain protein [Nocardioides sp. JS614] Length = 724 Score = 41.3 bits (95), Expect = 0.072, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 46/157 (29%), Gaps = 19/157 (12%) Query: 19 NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFN 78 A + + + L + E ++ + ++ + Sbjct: 168 ESRADSRLDRLIGFLDAVCRPDGKSWSNERVVIFTEYAHTVDWL------TRVLRQRGYV 221 Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVF 134 D + ++ + +L A + G G++LQ + LV Sbjct: 222 EDR---LAVIQGSTKPEDREYIRSQFTADPAKELVRVLLAT-DAAGEGIDLQTHCHRLVN 277 Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 F + ++ +Q I RI + G V++ + Sbjct: 278 FDIPFNPSRLEQRIGRID-----RYGQTDEPQVFHFV 309 >gi|260801152|ref|XP_002595460.1| hypothetical protein BRAFLDRAFT_69293 [Branchiostoma floridae] gi|229280706|gb|EEN51472.1| hypothetical protein BRAFLDRAFT_69293 [Branchiostoma floridae] Length = 650 Score = 41.3 bits (95), Expect = 0.072, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 15/120 (12%) Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLAR------------LQKAFPQGRTLDKDP 98 K L ++E K +V L ++ + D+D Sbjct: 30 SGKTCVLVELLERLKEEGHQTLVFSQSRKMLDIIQKILKSRGFKVMRIDGTITKLEDRDK 89 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ + G GLNL + +V + W+ Q ++R + + Sbjct: 90 RIRRFQSDPSWSVFLLTTQVGGVGLNLTA-ADRVVIYDPSWNPATDAQAVDRYFSRQDLR 148 >gi|323441317|gb|EGA98982.1| phage helicase [Staphylococcus aureus O46] Length = 301 Score = 41.3 bits (95), Expect = 0.073, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 2 KQYHKFQRELYCD-LQGENIEAFNSASKTVKCLQLANGAVYYDE 44 K Y + ++ + + + A N AS + K LQL+NGAVY D+ Sbjct: 254 KLYDELEKHYILESEEDGTVVAQNGASLSQKLLQLSNGAVYTDD 297 >gi|328774208|gb|EGF84245.1| hypothetical protein BATDEDRAFT_9192 [Batrachochytrium dendrobatidis JAM81] Length = 581 Score = 41.3 bits (95), Expect = 0.074, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 54/158 (34%), Gaps = 11/158 (6%) Query: 46 KHWKEVHDEKIKALEVIIEKAN-AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW 104 K + + ++ I+ K N P + F + +G T + I ++ Sbjct: 408 KSRVMIFSQYRDNVDEIVTKLNQHHPFLRVMSFIGQSSSKSGKKGKGFTQKEQLEVISKF 467 Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 G +L + GL++ I+ + Q + R G RQ + Sbjct: 468 QSGNYNVLV-STSIGEEGLDIGDVDLIVC-YDAQTSPVRMLQRMGRTGRKRQGR------ 519 Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 + ++++ +E+ + +IQ +++ K Sbjct: 520 --IVVILSKGKEEEIHRKAQAQYKSIQRAIMDGQGKRI 555 >gi|110637870|ref|YP_678077.1| SNF2 family helicase [Cytophaga hutchinsonii ATCC 33406] gi|110280551|gb|ABG58737.1| helicase, SNF2 family [Cytophaga hutchinsonii ATCC 33406] Length = 1379 Score = 41.3 bits (95), Expect = 0.074, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 56/139 (40%), Gaps = 7/139 (5%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 ++ +EK +N + + + + + +G + ++ Sbjct: 953 FAFIKEYLEKETGYKK--GVKWNRIALDEVEIITSEMSQARKENIKEAFLDGAVKIIIGT 1010 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 A+ G++LQ G ++ W+ + +Q+ RI + G+ R+V + Q++ Sbjct: 1011 -ATIREGIDLQRKGTVIYNCYPDWNPTDIRQLEGRIWRQG-NEFGYIRSVM---PLVQDS 1065 Query: 176 IDELVLQRLRTKSTIQDLL 194 +D V Q+L K++ + + Sbjct: 1066 MDVFVFQKLEEKTSRINDI 1084 >gi|331234511|ref|XP_003329915.1| Snf2 family protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309308905|gb|EFP85496.1| Snf2 family protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 76 Score = 41.3 bits (95), Expect = 0.075, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 16/48 (33%) Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 E V R + G V VY + ++ + Q + K + Sbjct: 5 WNPAAEIQAVDRLYRLGQVNPVHVYQYYVRGSLKMNIYQVQKRKGKLA 52 >gi|330933137|ref|XP_003304061.1| hypothetical protein PTT_16483 [Pyrenophora teres f. teres 0-1] gi|311319572|gb|EFQ87831.1| hypothetical protein PTT_16483 [Pyrenophora teres f. teres 0-1] Length = 2131 Score = 41.3 bits (95), Expect = 0.076, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 12/129 (9%) Query: 78 NSDLARLQKAFPQGRTLDKD---PCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGG 129 L R+ + ++ I+E+ LL Sbjct: 1935 MRVLERVLDHHEIRYSSTRETGAAQVIEEFKTNKEPATMKKLLILDVGDESAAGINLVNA 1994 Query: 130 NILVFFSLWWDLEEH-QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 N ++F S + +++ + + R R+ G + V++Y+++A TID +L+ R K Sbjct: 1995 NHVIFVSPLYTEKQYKYESSMAQAIARSRRHGQDKRVYIYHVVALRTIDVDILE-QRHKR 2053 Query: 189 TIQDLLLNA 197 + +++A Sbjct: 2054 --CEAMISA 2060 >gi|269839666|ref|YP_003324358.1| helicase [Thermobaculum terrenum ATCC BAA-798] gi|269791396|gb|ACZ43536.1| helicase domain protein [Thermobaculum terrenum ATCC BAA-798] Length = 950 Score = 41.3 bits (95), Expect = 0.076, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 24/154 (15%) Query: 53 DEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQ----------------GRTL 94 D K+ L + + + IV +F L++ + Sbjct: 471 DAKLACLADTLRELLRDGFQPIVFCYFIHTANYLKEHLEPLLRGEFEDLQVEAVTGELSE 530 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ I + + +L A G+NLQ + +V + L W+ +Q R+ Sbjct: 531 DQRKERIAQLAQAPRRVLVAT-DCLSEGINLQDHFDAVVHYDLPWNPNRLEQREGRVDRF 589 Query: 155 RQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTK 187 Q++ V + +N +D V++ L K Sbjct: 590 GQQRD----EVRAVTISGENNPVDLTVMRVLVRK 619 >gi|150866404|ref|XP_001385990.2| hypothetical protein PICST_36839 [Scheffersomyces stipitis CBS 6054] gi|149387660|gb|ABN67961.2| hypothetical protein PICST_36839 [Scheffersomyces stipitis CBS 6054] Length = 1761 Score = 41.3 bits (95), Expect = 0.077, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 39/113 (34%), Gaps = 14/113 (12%) Query: 91 GRTLDKDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G K +++ + + + + + + GL L + + Q I Sbjct: 1573 GGRRIKKYDSVETFKDPRNKITCFLLNAKAQASGLTL-INATHIFLCEPLVNTSLELQAI 1631 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 RI + G + V+ +NT++E ++ K L +K++ Sbjct: 1632 SRI-----HRIGQTKPTTVWMFAIENTVEESIVIMSTGKR------LEYMKQQ 1673 >gi|307947066|ref|ZP_07662401.1| helicase domain-containing protein [Roseibium sp. TrichSKD4] gi|307770730|gb|EFO29956.1| helicase domain-containing protein [Roseibium sp. TrichSKD4] Length = 923 Score = 41.3 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 6/81 (7%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A G+NLQ + ++ + L W+ HQQ R+ Q V Sbjct: 518 RILVAT-DCLSEGINLQQLFDTVIHYDLSWNPTRHQQREGRVNRFGQPAEL----VRSIM 572 Query: 170 LIAQNT-IDELVLQRLRTKST 189 + + ++ ID VL + K+ Sbjct: 573 MFSPDSAIDGAVLDVILRKAK 593 >gi|50285519|ref|XP_445188.1| hypothetical protein [Candida glabrata CBS 138] gi|49524491|emb|CAG58088.1| unnamed protein product [Candida glabrata] Length = 1470 Score = 41.3 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 42/121 (34%), Gaps = 6/121 (4%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I+ + + + L + + + I L + S G Sbjct: 1300 ILMYSQSFDFMKVVSQVLSLHNINNICCLQNNRNVGDMIARFKKTSDITCLLLNIRSLGA 1359 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 GLNL + ++ E ++R + G ++ +V+ + +NT++E ++ Sbjct: 1360 GLNLLN-ARHIFLLDPILNV-----NEEIQAMSRNNRIGQRQETYVWNFMLENTVEESIM 1413 Query: 182 Q 182 + Sbjct: 1414 R 1414 >gi|146304506|ref|YP_001191822.1| DNA repair helicase RAD25 [Metallosphaera sedula DSM 5348] gi|145702756|gb|ABP95898.1| DNA repair helicase RAD25 [Metallosphaera sedula DSM 5348] Length = 531 Score = 41.3 bits (95), Expect = 0.080, Method: Composition-based stats. Identities = 21/185 (11%), Positives = 54/185 (29%), Gaps = 28/185 (15%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 E+ + +++A + + L + K+ + I+EK Sbjct: 355 EIVKRAKEGDVKAMEALKVYSRIRYL-------------IGLTKGKLSKIREIVEKEKGR 401 Query: 70 PIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 +++ + + + ++++ + +L Sbjct: 402 KVVIFTQYVEHAELISKLIGGYILTGQMPKRERELVLEKFKQSNSGVLVLTTV---GDEG 458 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 L + +Q I+R+G + +G + +Y LIA+ T +E Sbjct: 459 LDIPDASVGIVVAGTS--SKRQYIQRLGRLLRNNSG-NKVATLYELIAKGTSEEY----Q 511 Query: 185 RTKST 189 K Sbjct: 512 SKKRR 516 >gi|321449564|gb|EFX61955.1| hypothetical protein DAPPUDRAFT_120717 [Daphnia pulex] Length = 289 Score = 41.3 bits (95), Expect = 0.082, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 4/74 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSL 137 L T++K +N+ + + G G+NL N ++ F Sbjct: 175 LDVDYLRMDGHTTVEKRNSDCNMFNDPMNIRARVFLISTKAGGMGINLTA-ANRVIIFDA 233 Query: 138 WWDLEEHQQMIERI 151 W+ Q I R+ Sbjct: 234 SWNPSHDIQSIFRV 247 >gi|221504276|gb|EEE29951.1| DNA repair protein, putative [Toxoplasma gondii VEG] Length = 1301 Score = 41.3 bits (95), Expect = 0.082, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 29/99 (29%), Gaps = 6/99 (6%) Query: 65 KANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-----TIQEWNEGKIPLLFAHPASC 119 DL + G K ++ ++ + +L + Sbjct: 1203 NHENCGGGPFAGIFQDLRDSKGDRETGLVATKREIGNGCTLRRQRDDEEGRILLCSLKAG 1262 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 GLNL + WW+ + Q ++RI Q + Sbjct: 1263 NVGLNLTR-ASRCYLMDGWWNPQVENQAMKRIWRFGQVR 1300 >gi|260101488|ref|ZP_05751725.1| SNF2/helicase domain protein [Lactobacillus helveticus DSM 20075] gi|260084702|gb|EEW68822.1| SNF2/helicase domain protein [Lactobacillus helveticus DSM 20075] Length = 57 Score = 41.3 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 22/38 (57%) Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G K V +Y ++ +N+I+E ++ K+ + ++L+ Sbjct: 1 MGQKHTVKIYKMVTRNSIEEKIISLQHKKADLAKIILD 38 >gi|325287281|ref|YP_004263071.1| helicase domain-containing protein [Cellulophaga lytica DSM 7489] gi|324322735|gb|ADY30200.1| helicase domain protein [Cellulophaga lytica DSM 7489] Length = 945 Score = 41.3 bits (95), Expect = 0.085, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 8/89 (8%) Query: 87 AFPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 F T + ++++ + +I L A + G+NL Y N + + + W + Sbjct: 473 QFNGSLTDTQQQDILEDFSKEDSEIRLFLAS-DAGSQGVNLHYFCNQMFNYDIPWSIITL 531 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 Q RI + G K+ F+YYLI+ Sbjct: 532 DQRNGRID-----RFGQKQTPFIYYLISD 555 >gi|313897952|ref|ZP_07831492.1| conserved hypothetical protein [Clostridium sp. HGF2] gi|312957224|gb|EFR38852.1| conserved hypothetical protein [Clostridium sp. HGF2] Length = 1747 Score = 41.3 bits (95), Expect = 0.085, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 4/118 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T ++ N+G I +LF A G G N+Q + + W + +Q Sbjct: 1388 FIHDFNTEVAKDRLFKDMNDGNIRVLFGSTAKLGAGTNVQKRIIAIHHVDVPWRASDIEQ 1447 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R Q + ++ + + + + D Q + TKS+ LL I Sbjct: 1448 QNGRAFR----QGNMYKEIYEFRYVTRKSFDAYSWQMVETKSSYMTQLLEGSVMREIE 1501 >gi|219117137|ref|XP_002179363.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409254|gb|EEC49186.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 853 Score = 41.3 bits (95), Expect = 0.085, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 32/94 (34%), Gaps = 6/94 (6%) Query: 95 DKDPCTIQEWNEG-----KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ-MI 148 + +++ + + +L N +F L + Sbjct: 753 HRQIASLRVFQKEIPGPTDPRVLVLKMDDEQSAGLNLTHLNHALFVHPLLALSRAEYDAY 812 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 E + R R+ G + V ++ +A+NT+D + + Sbjct: 813 ETQAIGRIRRFGQTKTVHLHRFLARNTMDMEIWE 846 >gi|13242495|ref|NP_077508.1| EsV-1-23 [Ectocarpus siliculosus virus 1] gi|13177305|gb|AAK14449.1|AF204951_23 EsV-1-23 [Ectocarpus siliculosus virus 1] Length = 612 Score = 41.3 bits (95), Expect = 0.087, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 19/113 (16%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + + +N G++ LL + GL+LQ + + F LWW++ + Q+I R Sbjct: 487 RERMRIKEAFNNGEMDLLIIS-KAGSVGLDLQ-CTSKVFMFDLWWNIPQMNQVIGRAIRF 544 Query: 155 RQRQAGFKR---AVFVYY--LIAQNTIDELVLQRLRT--KSTIQDLLLNALKK 200 + K V+VY + + K +L +A+KK Sbjct: 545 KSHHEPCKHKHVDVYVYQSVFVTK----------QAKGVKVFDAQVLFDAVKK 587 >gi|325284506|ref|YP_004257045.1| type III restriction protein res subunit [Deinococcus proteolyticus MRP] gi|324316680|gb|ADY27791.1| type III restriction protein res subunit [Deinococcus proteolyticus MRP] Length = 471 Score = 41.3 bits (95), Expect = 0.088, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 52/149 (34%), Gaps = 12/149 (8%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-----FNSDLARLQKAFPQGRT 93 + + E K + K++ LE I+ + + I+ + + L + Sbjct: 303 FLAHREAKSIAYGTEGKLRVLEEILAQHPSERTIIFTNDNATVYRISREFLIPSITHQTP 362 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + ++ + G+ LL G+++ +V + E Q++ Sbjct: 363 TKERHTLLERFRAGEYRLLVTS-RVLNEGVDVPEASVAVVLSGTSTEREHIQRL------ 415 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 R + + +Y +I + T +E + Q Sbjct: 416 GRILRRAQGKKAVLYEVITEGTTEERISQ 444 >gi|68059048|ref|XP_671503.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56487742|emb|CAH95874.1| hypothetical protein PB000382.01.0 [Plasmodium berghei] Length = 324 Score = 41.3 bits (95), Expect = 0.090, Method: Composition-based stats. Identities = 12/125 (9%), Positives = 33/125 (26%), Gaps = 18/125 (14%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH-------DE 54 K Y + + + ++ + N +D + + Sbjct: 200 KLYSDILSKNIDVINAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLIETSG 259 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQ---------GRTLDKDPCTIQE 103 K+ L+ ++ K + +++ L + D+ I + Sbjct: 260 KMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKKYEYLRGGSTVGDERQIRINK 319 Query: 104 WNEGK 108 +NE Sbjct: 320 FNEPN 324 >gi|331222921|ref|XP_003324134.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309303124|gb|EFP79715.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 614 Score = 40.9 bits (94), Expect = 0.096, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 37/134 (27%), Gaps = 22/134 (16%) Query: 28 KTVKCLQLANGAVY----YDEEKHWKEVHDEKIKALEVIIEKA-------NAAPIIVAYH 76 + Q N ++ + + W+ K+ L ++ N +V Sbjct: 470 QLTMLRQFCNHPLFARSEIEFQPEWRWQDSAKVVHLVDNLKVFLEGVRGINRTKAVVFSS 529 Query: 77 FNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 F L ++ +D + +L A + G G++L Sbjct: 530 FTGFLGIIERALEENNIKSTWLTGDDTPKKRDENLEEFRTNNTCNVLLASVQAGGVGIDL 589 Query: 126 QYGGNILVFFSLWW 139 + N+ + Sbjct: 590 RCAQNVYMMVGTPQ 603 >gi|294659042|ref|XP_461380.2| DEHA2F23870p [Debaryomyces hansenii CBS767] gi|202953572|emb|CAG89787.2| DEHA2F23870p [Debaryomyces hansenii] Length = 1781 Score = 40.9 bits (94), Expect = 0.096, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 8/92 (8%) Query: 99 CTIQEWNEGK--IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +++E+ + + I + + GL L + + Q I RI Sbjct: 1612 DSVEEFKDPQNEITCFLLNAKAQASGLTLVN-ATHIFLCEPLVNTSLELQAISRI----- 1665 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + G +R V+ +NT++E ++ K Sbjct: 1666 HRIGQRRHTTVWMFAIENTVEESIVLMSTNKR 1697 >gi|326473702|gb|EGD97711.1| hypothetical protein TESG_05112 [Trichophyton tonsurans CBS 112818] Length = 314 Score = 40.9 bits (94), Expect = 0.098, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 7/82 (8%) Query: 96 KDPCTIQEWNEGKIPL--LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 + +Q + + L GLNLQ +V FS + Sbjct: 149 EREHLVQAFTTDPERVMVLVCSYNVSSTGLNLQKLCRNVVIFSPPTSKASQD-----QAI 203 Query: 154 TRQRQAGFKRAVFVYYLIAQNT 175 R ++ G V VY + +++ Sbjct: 204 GRVKRLGQTHVVHVYEIRVRDS 225 >gi|331222825|ref|XP_003324086.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309303076|gb|EFP79667.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 614 Score = 40.9 bits (94), Expect = 0.100, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 37/134 (27%), Gaps = 22/134 (16%) Query: 28 KTVKCLQLANGAVY----YDEEKHWKEVHDEKIKALEVIIEKA-------NAAPIIVAYH 76 + Q N ++ + + W+ K+ L ++ N +V Sbjct: 470 QLTMLRQFCNHPLFARSEIEFQPEWRWQDSAKVVHLVDNLKVFLEGVRGINRTKAVVFSS 529 Query: 77 FNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 F L ++ +D + +L A + G G++L Sbjct: 530 FTGFLGIIERALEENNIKSTWLTGDDTPKKRDENLEEFRTNNTCNVLLASVQAGGVGIDL 589 Query: 126 QYGGNILVFFSLWW 139 + N+ + Sbjct: 590 RCAQNVYMMVGTPQ 603 >gi|302822206|ref|XP_002992762.1| hypothetical protein SELMODRAFT_430930 [Selaginella moellendorffii] gi|300139407|gb|EFJ06148.1| hypothetical protein SELMODRAFT_430930 [Selaginella moellendorffii] Length = 196 Score = 40.9 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 23/60 (38%) Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 I + + + G + V + I +++++E + Q K + L + + + Sbjct: 129 SNIPAVAPSSESSIGQTKNVSIKRFIVKDSVEERMQQVQARKQRLIAGALTDEEVRSARI 188 >gi|123408237|ref|XP_001303158.1| hypothetical protein [Trichomonas vaginalis G3] gi|121884515|gb|EAX90228.1| hypothetical protein TVAG_086010 [Trichomonas vaginalis G3] Length = 1179 Score = 40.9 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 20/188 (10%), Positives = 61/188 (32%), Gaps = 22/188 (11%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y + +E ++ EN + + K L++ + K+ L + Sbjct: 302 MYIELLQESSEKIRSENADIKDLCEFASKLRALSSHPFLATDTPCDIMTASGKVPVLSKL 361 Query: 63 I--EKANAAPIIVAYH---------FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK-IP 110 + ++ + + + + ++ + T ++ I ++N + Sbjct: 362 LSIQRNDGKKVAIFCNSNMVTALHTIMTECKTIYTQIEANSTENEANILIDDFNHQQGHR 421 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDL-EEHQQMIERIGVTRQRQAGFKRAVFVYY 169 ++ L ++ G + F W E+ + +++ + Q +Y Sbjct: 422 VIIVPANYASLCLE-KFNGETVFAFDTDWTPIEDGKLIVKWHARNSKAQ--------IYR 472 Query: 170 LIAQNTID 177 LI ++ + Sbjct: 473 LITSDSFE 480 >gi|330824496|ref|YP_004387799.1| DEAD-like helicase [Alicycliphilus denitrificans K601] gi|329309868|gb|AEB84283.1| DEAD-like helicase [Alicycliphilus denitrificans K601] Length = 760 Score = 40.9 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 638 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 691 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K V V YL + L + K + + + + V Sbjct: 692 SWRIGQKLPVRVIYLGYTASSQMTCLGLMARKIMVSQSTSGDVPESGLDV 741 >gi|312380577|gb|EFR26533.1| hypothetical protein AND_07337 [Anopheles darlingi] Length = 660 Score = 40.9 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 40/120 (33%), Gaps = 13/120 (10%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 L + + + G + + G++ ++ A A +V +++ Sbjct: 152 RRRLNYVAEPYHAGMPASRRRTIQNAFMGGELRIVVATIAFGMGINK--ADIRAIVHYNM 209 Query: 138 WWDLEEHQQMIER---------IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + E + Q + R + + + + I N+ID V+++L K Sbjct: 210 PKNFESYVQEVGRAGRDGKLSHCHLFLDSRGSDRNELR--RFIYANSIDRHVVRKLLQKI 267 >gi|321465194|gb|EFX76197.1| hypothetical protein DAPPUDRAFT_249322 [Daphnia pulex] Length = 292 Score = 40.9 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 7/73 (9%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ +L + G GLNL N L W+ + +E R + G K+ Sbjct: 130 QKKEVHVLLVSLLAGGTGLNLIGPANHLFLSDQNWNPQ-----VEAQAGDRIYRVGQKKE 184 Query: 165 VFV--YYLIAQNT 175 V V L+A T Sbjct: 185 VHVLLVSLLAGGT 197 Score = 40.1 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 5/63 (7%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA 164 + ++ +L + G GLNL N L W+ + +E R + G K+ Sbjct: 181 QKKEVHVLLVSLLAGGTGLNLIGPANHLFLSDQNWNPQ-----VEAQAGDRIYRVGQKKE 235 Query: 165 VFV 167 V V Sbjct: 236 VHV 238 Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 7/68 (10%) Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV-- 167 +L + G GLNL N L W+ + +E R + G K+ V V Sbjct: 84 KVLLVSLLAGGTGLNLIGPANHLFLSDQNWNPQ-----VEAQAGDRIYRVGQKKEVHVLL 138 Query: 168 YYLIAQNT 175 L+A T Sbjct: 139 VSLLAGGT 146 >gi|294807616|ref|ZP_06766409.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|294445052|gb|EFG13726.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] Length = 442 Score = 40.9 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 42/107 (39%), Gaps = 8/107 (7%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++ I ++ G++ L A P G GLN QY + + F +++ Sbjct: 343 YGSQDDEEADKVIADFKNGRLKYLAAKPEMLGEGLNFQYHCHKAIMFI------DYRFND 396 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + + R + K V +Y + A++ + + + K ++ Sbjct: 397 KFQAIARIYRFMQKHPVDLYLVYAES--EGEIFKSFMQKWAQHREMV 441 >gi|78224251|ref|YP_385998.1| helicase-like [Geobacter metallireducens GS-15] gi|78195506|gb|ABB33273.1| Helicase-like protein [Geobacter metallireducens GS-15] Length = 993 Score = 40.9 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 2/80 (2%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G + + +N P + + GL+ + +V + L + + +Q R Sbjct: 809 GEAQLRTEDLQKAFNSPFWPHVLVTTSVGQEGLDFHLWCDTVVHWDLPRNPVDLEQREGR 868 Query: 151 IGVTR--QRQAGFKRAVFVY 168 I + V +Y Sbjct: 869 IQRFGGLCIRQAIASKVDIY 888 >gi|325957866|ref|YP_004289332.1| helicase domain-containing protein [Methanobacterium sp. AL-21] gi|325329298|gb|ADZ08360.1| helicase domain protein [Methanobacterium sp. AL-21] Length = 769 Score = 40.9 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 54/169 (31%), Gaps = 16/169 (9%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K + +Q+ + + + + + + I + I A F + + Sbjct: 362 KLKRLMQI---LKKELKNSNSRIIIFTQFRDSVENIYQHCMETNINAVKF---YGQASRE 415 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 +G T K I+ + G+ +L + G+++ +++V + Q Sbjct: 416 NEKGLTQKKQKEIIKSFKNGEYDVLI-STSVAEEGIDIPSV-DLVVLYEPVPSEIRMIQR 473 Query: 148 IERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 R G + + + LI + T DE K LN Sbjct: 474 RGRTGRKNRGRM--------FILITKGTRDESYYWSSINKEKQMKKQLN 514 >gi|301155358|emb|CBW14824.1| RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor) [Haemophilus parainfluenzae T3T1] Length = 920 Score = 40.9 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 8/145 (5%) Query: 33 LQLANGAVYYDEEKHW--KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ A DE+ HW + + + + VI + A A + + R + Sbjct: 433 HQITIDAAEVDEKIHWLIDFLKSHRNEKILVICKTAQTAIQLEQILREKEAIRSAVFHER 492 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++D + + + G N Q+ +++ F L + + +Q I R Sbjct: 493 MSIIERDRAAAYFADTDNGAQVLLSSSIGSEGRNFQFACHLV-LFDLPENPDLLEQCIGR 551 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNT 175 + + G R V +Y + Sbjct: 552 LD-----RIGQTRDVQIYVPCLSGS 571 >gi|117925306|ref|YP_865923.1| helicase domain-containing protein [Magnetococcus sp. MC-1] gi|117609062|gb|ABK44517.1| helicase domain protein [Magnetococcus sp. MC-1] Length = 948 Score = 40.9 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 6/98 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T ++ + +E LL A G+NLQ N +V + L W+ H+Q R+ Sbjct: 519 TPEEREEKVHGLSEFAKRLLVAT-DCLSEGINLQNLFNAVVHYDLTWNPTRHEQREGRVD 577 Query: 153 VTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKST 189 Q V V +N +D VLQ + K+ Sbjct: 578 RFGQPSPK----VRVLMYYGENNPVDGAVLQVILRKAE 611 >gi|58038295|ref|YP_190264.1| DNA methylase [Gluconobacter oxydans 621H] gi|58000709|gb|AAW59608.1| DNA methylase [Gluconobacter oxydans 621H] Length = 1713 Score = 40.9 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 4/103 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ N G+ +L A+ G G+N Q L + W + + Q Sbjct: 1331 FMQHYKKSAAKQGLFRDLNSGRKRILIGSSATMGTGVNAQQRLIALHHLDVPWLVADIIQ 1390 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 RI Q + +Y + ++D Q L K Sbjct: 1391 REGRIER----QGNQNPVIQIYAYALKGSVDATNWQLLERKQR 1429 >gi|229845571|ref|ZP_04465698.1| ATP-dependent helicase HepA [Haemophilus influenzae 6P18H1] gi|229811506|gb|EEP47208.1| ATP-dependent helicase HepA [Haemophilus influenzae 6P18H1] Length = 923 Score = 40.9 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 392 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDFL 451 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I V + ++ + + I+ Sbjct: 452 KLHRDEKIFVICQTAATTIQLEQILREREAIRAAVFHEKMSIIERDRAAAYFADLENGAQ 511 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V +Y Sbjct: 512 VLLSSSIGSEGRNFQFATNLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQIYVPC 565 Query: 172 AQNT 175 A+++ Sbjct: 566 AKDS 569 >gi|148241073|ref|YP_001220574.1| hypothetical protein BBta_p0264 [Bradyrhizobium sp. BTAi1] gi|146411449|gb|ABQ39902.1| hypothetical protein BBta_p0264 [Bradyrhizobium sp. BTAi1] Length = 1748 Score = 40.9 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 41/138 (29%), Gaps = 11/138 (7%) Query: 67 NAAPIIVAYHFNSD----LARLQKAFPQGRTLDKDPCTIQEW---NEGKIPLLFAHPASC 119 AY + D L + K + + GK+ L + Sbjct: 1364 EKRRGFSAYRWIRDELVRLGVPPGEIAFMQDYKKSEAKQRLFGDVRAGKVRFLIGSSDTM 1423 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 G G+N Q L + W + +Q RI Q + ++ + ++D Sbjct: 1424 GTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVR----QGNQHDEIDIFAYATEGSLDAQ 1479 Query: 180 VLQRLRTKSTIQDLLLNA 197 + Q K+ L+ Sbjct: 1480 MWQNNERKARFIAAALSG 1497 >gi|71993231|ref|NP_001023359.1| hypothetical protein T05A12.4 [Caenorhabditis elegans] gi|54027931|gb|AAV28333.1| Hypothetical protein T05A12.4a [Caenorhabditis elegans] Length = 1622 Score = 40.9 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 6/89 (6%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +L + C +GLN+ G N ++F Q I RI Sbjct: 1481 KKVFDFDVSEDTKVLLCSLSLCANGLNMT-GANHIIFLDPPHLQSVLNQAIGRI-----N 1534 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + G KR + VY+L+ ++D + + + Sbjct: 1535 RFGQKRDMNVYHLLVDGSLDIELRETAKK 1563 >gi|321476508|gb|EFX87468.1| hypothetical protein DAPPUDRAFT_96517 [Daphnia pulex] Length = 325 Score = 40.9 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 4/76 (5%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGK---IPLLFAHPASCGHGLNLQYGGNILVFFSL 137 L T++K +N+ + + G G+NL N ++ F Sbjct: 251 LDVDYLRMDGHTTVEKRNSDCNMFNDPMNIRARVFLISTKAGGMGINLTA-ANRVIIFDA 309 Query: 138 WWDLEEHQQMIERIGV 153 W+ Q I R+ Sbjct: 310 SWNPSHDIQSIFRVYR 325 >gi|154243836|ref|YP_001409409.1| helicase domain-containing protein [Xanthobacter autotrophicus Py2] gi|154162958|gb|ABS70173.1| helicase domain protein [Xanthobacter autotrophicus Py2] Length = 1697 Score = 40.9 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 4/92 (4%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 GK+ L + G G+N Q L + W + +Q RI Q + Sbjct: 1360 AGKVRFLLGSSDTMGTGVNAQLRLKALHHLDVPWLPSQIEQREGRIAR----QGNQHDVI 1415 Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 ++ ++D + Q K+ L+ Sbjct: 1416 DIFAYATLGSLDARMWQNNERKARFIAAALSG 1447 >gi|320593937|gb|EFX06340.1| DNA/RNA helicase [Grosmannia clavigera kw1407] Length = 1000 Score = 40.9 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 6/77 (7%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAV 165 G +L A + GL+L + +W+ ++ ER + R +AG Sbjct: 904 AGVSRVLIATIGTSAEGLDLTR-ASYAFILEPYWNHDQ-----ERQALGRVLRAGQCAQT 957 Query: 166 FVYYLIAQNTIDELVLQ 182 +Y L+ + I E ++Q Sbjct: 958 HLYKLVCPDNIAERLIQ 974 >gi|18071214|ref|NP_542283.1| putative DNA methylase [Sinorhizobium phage PBC5] gi|17940320|gb|AAL49564.1|AF448724_1 putative DNA methylase [Sinorhizobium phage PBC5] Length = 2849 Score = 40.9 bits (94), Expect = 0.12, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 33/111 (29%), Gaps = 3/111 (2%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 T + + G++ LF G G N+Q L W + +Q Sbjct: 1263 FIHDANTQAQKEELFGKVRSGRVRFLFGSTPKMGAGTNVQNRLVALHHIDAPWRPSDLEQ 1322 Query: 147 MIER---IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 R G + + + +NT+D Q + K+ + Sbjct: 1323 RDGRGIRQGNELYAEDPDGFEIEILRYATKNTLDARTWQTIEAKARFIQQV 1373 >gi|7508223|pir||T32703 hypothetical protein T22D1.7 - Caenorhabditis elegans Length = 869 Score = 40.5 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 6/89 (6%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 +L + C +GLN+ G N ++F Q I RI Sbjct: 728 KKVFDFDVSEDTKVLLCSLSLCANGLNMT-GANHIIFLDPPHLQSVLNQAIGRI-----N 781 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + G KR + VY+L+ ++D + + + Sbjct: 782 RFGQKRDMNVYHLLVDGSLDIELRETAKK 810 >gi|145631648|ref|ZP_01787412.1| ATP-dependent helicase HepA [Haemophilus influenzae R3021] gi|144982727|gb|EDJ90259.1| ATP-dependent helicase HepA [Haemophilus influenzae R3021] Length = 923 Score = 40.5 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 58/184 (31%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 392 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDFL 451 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I V + ++ + + I+ Sbjct: 452 KLHRDEKIFVICQTAATTIQLEQILREREAIRTAVFHEKMSIIERDRAAAYFADLENGAQ 511 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V +Y Sbjct: 512 VLLSSSIGSEGRNFQFATNLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQIYVPC 565 Query: 172 AQNT 175 A+++ Sbjct: 566 AKDS 569 >gi|14520497|ref|NP_125972.1| Hef nuclease [Pyrococcus abyssi GE5] gi|5457712|emb|CAB49203.1| Putative ATP-dependent ERCC4-like helicase [Pyrococcus abyssi GE5] Length = 752 Score = 40.5 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 75/223 (33%), Gaps = 35/223 (15%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ Y ++LY + + + A + + + E + + ++ Sbjct: 300 LRVY---LKKLYEEAKTGSTRASKELFLDRRMKKALALLIQAKELGIDHPKMEVLKELVK 356 Query: 61 VIIEKANAAPIIVAYHFNSD------------------LARLQKAFPQGRTLDKDPCTIQ 102 + K + IIV ++ + + K +G + + + Sbjct: 357 EQLSKKENSKIIVFTNYRETARKVVEELTKEGIKAKRFVGQATKENDRGMSQREQKLILD 416 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G+ +L A + GL++ +++VF+ Q R+ + G + Sbjct: 417 SFARGEFNVLVAT-SVGEEGLDVPEV-DLVVFYEPVPSAIRSVQ--------RRGRTGRQ 466 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL----NALKKE 201 + V LIAQ T DE + K + A+K+E Sbjct: 467 KPGRVVILIAQGTRDEAYYWSSKHKERQMRETIRMVSQAIKRE 509 >gi|321472411|gb|EFX83381.1| hypothetical protein DAPPUDRAFT_48010 [Daphnia pulex] Length = 657 Score = 40.5 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 64/199 (32%), Gaps = 19/199 (9%) Query: 10 ELYCDLQGENIEAFNSAS-----KTVKCLQLANGAVYYDEEK---HWKEVHDEKIKALEV 61 E+ DL+ + S K + ++ E++ + + ++ Sbjct: 432 EMMSDLKSKFGNDCQIGSAVSHPKLTRLKEIVLEHFQKAEKEGRPTRVMIFSQYRDSVNE 491 Query: 62 IIEKANAA-PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 I+ P+I A F +G T I++++EG L A Sbjct: 492 IVALLEEYAPLIKAMSFVGHGNSSGGVKTKGFTQADQIRIIKQFSEGDYNTLVAT-CVGE 550 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GL++ ++++ + + Q R G R + + L+ + + Sbjct: 551 EGLDI-GDVDMIICYDVHKSPVRLVQRCGRTGRQRDGR--------IVMLMTEGKEEHTY 601 Query: 181 LQRLRTKSTIQDLLLNALK 199 Q + K + ++ K Sbjct: 602 NQCMSQKKNLLKNIVGNPK 620 >gi|67623509|ref|XP_668037.1| eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3) [Cryptosporidium hominis TU502] gi|54659212|gb|EAL37800.1| eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3) [Cryptosporidium hominis] Length = 395 Score = 40.5 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 37/131 (28%), Gaps = 11/131 (8%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 + + II + + ++E+ EGK +L Sbjct: 259 LTVTQSIIFCNTKNKVEWLSKKMMENHFTVSFVHGDLPQVTREEILREFREGKTRVLITT 318 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 Q N++V + L + E + I R G + LI + Sbjct: 319 DLWGRGIDVQQV--NLVVNYDLPINKELYIHRIGRSGRFGRSGIA-------INLITKE- 368 Query: 176 IDELVLQRLRT 186 DE +L L Sbjct: 369 -DESMLSLLER 378 >gi|66363178|ref|XP_628555.1| eIF4A-1; eukaryotic translation initiation factor 4A-1; RNA SFII helicase [Cryptosporidium parvum Iowa II] gi|46229820|gb|EAK90638.1| eIF4A-1; eukaryotic translation initiation factor 4A-1; RNA SFII helicase [Cryptosporidium parvum Iowa II] Length = 396 Score = 40.5 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 37/131 (28%), Gaps = 11/131 (8%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 + + II + + ++E+ EGK +L Sbjct: 260 LTVTQSIIFCNTKNKVEWLSKKMMENHFTVSFVHGDLPQVTREEILREFREGKTRVLITT 319 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 Q N++V + L + E + I R G + LI + Sbjct: 320 DLWGRGIDVQQV--NLVVNYDLPINKELYIHRIGRSGRFGRSGIA-------INLITKE- 369 Query: 176 IDELVLQRLRT 186 DE +L L Sbjct: 370 -DESMLSLLER 379 >gi|289628782|ref|ZP_06461736.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330870249|gb|EGH04958.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 752 Score = 40.5 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L I + W R Sbjct: 630 RREDWILDQVDRGVDVLITNPELVKTGLDLLDFPTIAFMQTGWNVYTVQ------QAARR 683 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 684 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 741 >gi|262282774|ref|ZP_06060542.1| predicted protein [Streptococcus sp. 2_1_36FAA] gi|262262065|gb|EEY80763.1| predicted protein [Streptococcus sp. 2_1_36FAA] Length = 128 Score = 40.5 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 12/94 (12%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + +P G ++L + ++F ++L Q RI + YYL Sbjct: 6 MILNPQILGKSVSLHREVHDALYFEYNFNLTFILQYRYRIHRLG---LEDNQYTRYYYLQ 62 Query: 172 AQ---------NTIDELVLQRLRTKSTIQDLLLN 196 + IDE + +L+ K I ++ Sbjct: 63 TKSEPADSGDAGYIDEKIYSKLKKKEEIMYNAID 96 >gi|222475988|ref|YP_002564509.1| type III restriction protein res subunit [Halorubrum lacusprofundi ATCC 49239] gi|222454359|gb|ACM58623.1| type III restriction protein res subunit [Halorubrum lacusprofundi ATCC 49239] Length = 466 Score = 40.5 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 49/137 (35%), Gaps = 11/137 (8%) Query: 55 KIKALEVIIEKANAAPIIVAY---HFNSDLARL--QKAFPQGRTLDKDPCTIQEWNEGKI 109 K+ L+ ++++ + I+ F D++R D+ + + G+ Sbjct: 332 KLDTLDNLLKRHHDDRTIIFTANNDFAYDISREFIVPCITHQTKTDERTEILDRFRSGEY 391 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L N+ + S ++ Q + RI + + +Y Sbjct: 392 SMLVTSQVL--DEGIDVPAANVGIILSGSASKRQYAQRLGRILRPTDDR----QPARLYE 445 Query: 170 LIAQNTIDELVLQRLRT 186 +I ++T++ V QR R Sbjct: 446 IITEDTMETYVSQRRRE 462 >gi|89098234|ref|ZP_01171119.1| hypothetical protein B14911_10747 [Bacillus sp. NRRL B-14911] gi|89087091|gb|EAR66207.1| hypothetical protein B14911_10747 [Bacillus sp. NRRL B-14911] Length = 1115 Score = 40.5 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 6/111 (5%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 T + Q+ + + GL+L L+++ W L Sbjct: 829 TNTRSEWLKQKIEDEGYDVCIVSQELVKVGLDLL-CCPTLIYYQFSWSL-----FTINQS 882 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 R + G ++YL +N+ E + Q + K+ + L + + Sbjct: 883 AKRSWRIGQTEECRLFYLAYENSFQEKMAQIIAMKNRATTAINGELSSDGL 933 >gi|66362534|ref|XP_628233.1| protein with DEXDc plus ring plus HELICc; possible SNF2 domain [Cryptosporidium parvum Iowa II] gi|46229715|gb|EAK90533.1| protein with DEXDc plus ring plus HELICc; possible SNF2 domain [Cryptosporidium parvum Iowa II] Length = 2042 Score = 40.5 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 19/138 (13%) Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPC-------TIQEWN------E 106 I N II+ F + L A L K C I+E++ + Sbjct: 1863 IKWILNNNNDKIIIFSDFQPVIDILSSAMHLNEILFKKYCGGKSEYHIIREFSSSENSID 1922 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + + G G+N+ N ++F S + + Q I RI + G + Sbjct: 1923 INYRVLLCNHLNVGKGVNITA-ANHIIFVSPLLNKSDELQAIGRII-----RMGQTKTPH 1976 Query: 167 VYYLIAQNTIDELVLQRL 184 ++ I N+IDEL+ Q L Sbjct: 1977 IWNFIIHNSIDELIFQYL 1994 >gi|260753609|ref|YP_003226502.1| helicase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552972|gb|ACV75918.1| helicase domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 894 Score = 40.5 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 31/115 (26%), Gaps = 13/115 (11%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDL 141 + +N +L A GLNL ++ W+ Sbjct: 731 FARMMSGATAPQTRRMLQSAFNRSSSWPMVLLAQSRVGREGLNLHEACRTVILLHAEWNP 790 Query: 142 EEHQQMIERIGVTRQRQAGFKRA-----------VFVYYLIAQNTIDELVLQRLR 185 +Q I R+ R + V+ ++ T D+ Q L+ Sbjct: 791 GIVEQQIGRVDRKNSLWLREWRKWRDHGDGLPPRIRVHPVVVSGTYDDHNWQVLK 845 >gi|313889321|ref|ZP_07822970.1| helicase C-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313122312|gb|EFR45402.1| helicase C-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 119 Score = 40.5 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 4/99 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + + +G+I +L G G N+Q L + W + +Q Sbjct: 23 FIHEANSDKQKDELFAKVRKGEIRILMGSTQKMGAGTNVQNKLIALHDLDVPWRPADLEQ 82 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 RI Q + V +Y + +NT D + R Sbjct: 83 RAGRIVR----QGNENKEVNIYRYVTENTFDAYLWVRHE 117 >gi|154492435|ref|ZP_02032061.1| hypothetical protein PARMER_02069 [Parabacteroides merdae ATCC 43184] gi|154087660|gb|EDN86705.1| hypothetical protein PARMER_02069 [Parabacteroides merdae ATCC 43184] Length = 835 Score = 40.5 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 44/110 (40%), Gaps = 8/110 (7%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 + ++ I ++ +G++ L A P G GLN QY + + F +++ Sbjct: 342 YGSQDDEEADKVISDFKDGRLKYLAAKPEMLGEGLNFQYHCHKAIMFI------DYRFND 395 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + + R + + V +Y + A++ + + + K ++ + Sbjct: 396 KFQAIARIYRFMQQHPVDLYLVYAES--EGEIFKSFMQKWAQHREMVANM 443 >gi|297723371|ref|NP_001174049.1| Os04g0566100 [Oryza sativa Japonica Group] gi|255675696|dbj|BAH92777.1| Os04g0566100 [Oryza sativa Japonica Group] Length = 914 Score = 40.5 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 16/29 (55%) Query: 169 YLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 +L+ + ++DE + + R K + +L + Sbjct: 782 WLVTKGSVDENIYEIARRKLVLDAAILQS 810 >gi|330885761|gb|EGH19910.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. glycinea str. race 4] Length = 752 Score = 40.5 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L I + W R Sbjct: 630 RREDWILDQVDRGVDVLITNPELVKTGLDLLDFPTIAFMQTGWNVYTVQ------QAARR 683 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 684 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 741 >gi|320326210|gb|EFW82265.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. glycinea str. B076] Length = 752 Score = 40.5 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L I + W R Sbjct: 630 RREDWILDQVDRGVDVLITNPELVKTGLDLLDFPTIAFMQTGWNVYTVQ------QAARR 683 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 684 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 741 >gi|330931683|ref|XP_003303496.1| hypothetical protein PTT_15727 [Pyrenophora teres f. teres 0-1] gi|311320467|gb|EFQ88402.1| hypothetical protein PTT_15727 [Pyrenophora teres f. teres 0-1] Length = 735 Score = 40.5 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 11/149 (7%) Query: 52 HDEKIKALEVIIEKANAAP---IIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 H K+ I + +I A + + Q N Sbjct: 566 HVRKLYPERKICITSQYLKVLDMIKAALHERFGIIALEYNGVTPDSVRLENLSQFKNYSH 625 Query: 109 IPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + L + G G+N+Q +I++ +WW+ + E +R + G V + Sbjct: 626 PSVPLLLSGKAGGEGINIQQ-ASIMIQTEIWWN-----RNAELQVYSRLLRPGQLHKVII 679 Query: 168 YYLIAQN-TIDELVLQRLRTKSTIQDLLL 195 L + +ID+ ++ K T +L+ Sbjct: 680 IRLQGKGCSIDDCIIGVQCRKKTTNTILM 708 >gi|119720665|ref|YP_921160.1| type III restriction enzyme, res subunit [Thermofilum pendens Hrk 5] gi|119525785|gb|ABL79157.1| DNA repair helicase RAD25 [Thermofilum pendens Hrk 5] Length = 451 Score = 40.5 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 58/182 (31%), Gaps = 25/182 (13%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAA 69 E L ++ EA + + ++A A K++ LE ++ + Sbjct: 284 ERLAALSVKDPEAREALLAWYRARRIALHA-------------SSKMEVLEELLARHRGD 330 Query: 70 PIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 +++ + R+ ++ + + +G + + Sbjct: 331 KVLIFAEHGDVVRRISSRFLVPEITYRTPEEERRAVMSAFRKGLVRAIVTSKVLEEGVD- 389 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 N+ V S E Q + R+ R KRAV VY ++ T + + ++ Sbjct: 390 -VPDANVAVILSGTASRREFVQRLGRVLRPR----EGKRAV-VYEVVTSGTKEVEISRKR 443 Query: 185 RT 186 R Sbjct: 444 RK 445 >gi|68468369|ref|XP_721744.1| hypothetical protein CaO19.1667 [Candida albicans SC5314] gi|68468612|ref|XP_721625.1| hypothetical protein CaO19.9236 [Candida albicans SC5314] gi|46443548|gb|EAL02829.1| hypothetical protein CaO19.9236 [Candida albicans SC5314] gi|46443676|gb|EAL02956.1| hypothetical protein CaO19.1667 [Candida albicans SC5314] Length = 1250 Score = 40.5 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 15/136 (11%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + + + I+ +F + + R Q + N G I L + A Sbjct: 1088 YYLIELLEILKIRHIIYANFITPIKRAQNLYDFSNYDVDKEE-----NNGGI-CLVMNIA 1141 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 HGLN+ +I + Q+ IE + R + G + V V L + +D Sbjct: 1142 HSSHGLNIIAATHIYFI-----NP-VKQESIEAQAIKRAHRIGQTKEVTVKTLYLKG-VD 1194 Query: 178 E-LVLQRLRTKSTIQD 192 E +L R K Sbjct: 1195 ELKILSR-NEKLKNAK 1209 >gi|242023841|ref|XP_002432339.1| ATP-dependent DNA helicase Q4, putative [Pediculus humanus corporis] gi|212517762|gb|EEB19601.1| ATP-dependent DNA helicase Q4, putative [Pediculus humanus corporis] Length = 1250 Score = 40.5 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 40/114 (35%), Gaps = 9/114 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L+ +++ G + + + G + ++ A A ++ +++ D Sbjct: 808 LSWTAESYHAGMAGPRRKQVQKAFMNGNVRIVVATVAFGMGINK--KDIRSVIHYNMPRD 865 Query: 141 LEEHQQMIER------IGVTRQRQAGFKRAVF-VYYLIAQNTIDELVLQRLRTK 187 E + Q + R + V + I NTI+ VL++L + Sbjct: 866 FESYVQEVGRAGRDGMFAHCHLFLDPNGKDVNELKRHINSNTIERHVLRKLLER 919 >gi|260796587|ref|XP_002593286.1| hypothetical protein BRAFLDRAFT_59324 [Branchiostoma floridae] gi|229278510|gb|EEN49297.1| hypothetical protein BRAFLDRAFT_59324 [Branchiostoma floridae] Length = 378 Score = 40.5 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 52/161 (32%), Gaps = 20/161 (12%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF----------PQ 90 + E + K++AL ++ N +V + L L + Sbjct: 214 KLKQFYVKVEREEHKLEALCDLLPLLNTTQAVVFCNTPRKLDWLAERMSARGITVSATHH 273 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 + ++ T+QE+ G +L + ++ + L + E I R Sbjct: 274 DMSQEERDLTLQEFRSGSSRVLITTEQLAREIRQSRISCPTIINYDLPSNPEN---YITR 330 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +G + + L+ + +E +L+ + K Q Sbjct: 331 VGGSDVLRRR-----IAVNLMVKG--EERMLRDIEQKYNTQ 364 >gi|171911735|ref|ZP_02927205.1| ATP-dependent helicase HepA [Verrucomicrobium spinosum DSM 4136] Length = 921 Score = 40.5 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 8/115 (6%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCG 120 +I K + +L F +G T+ + + E +L Sbjct: 469 LICKTKHLVEEIHTLLLHELNVNVALFHEGLTMLQRDRNAAYFAEEDGARVLICS-EIGS 527 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G N Q+ + LV F L + E +Q I R+ + G + ++ T Sbjct: 528 EGRNFQF-AHHLVLFDLPENPELLEQRIGRLD-----RIGQTDTIHIHVPYVAGT 576 >gi|119613043|gb|EAW92637.1| RAD26L hypothetical protein, isoform CRA_c [Homo sapiens] Length = 672 Score = 40.5 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 18/133 (13%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 509 KMKVLQQLLNHCRKNRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 553 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N++V F W+ Q Sbjct: 554 LDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPANDLQ 612 Query: 147 MIER-IGVTRQRQ 158 I+R R+ + Sbjct: 613 AIDRTQTHCRRER 625 >gi|110598199|ref|ZP_01386476.1| Helicase-like [Chlorobium ferrooxidans DSM 13031] gi|110340213|gb|EAT58711.1| Helicase-like [Chlorobium ferrooxidans DSM 13031] Length = 943 Score = 40.5 bits (93), Expect = 0.16, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 61/219 (27%), Gaps = 45/219 (20%) Query: 13 CDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPII 72 +L I A + V ++ + K + I Sbjct: 441 AELNSNEISALSLL------------CVKAEQLSGIEHDWKAKQAIEFIKTWLKEGFNPI 488 Query: 73 VAYHFNSDLARLQKAFPQGRT-------------LDKDPCTIQEWNEGKIPLLFAHPASC 119 V + + + G ++ I + ++ A Sbjct: 489 VFCRYIATANYIGALLKNGLPESVDVQVVTSELADEQRREKINLMADSTQRVMVAT-DCL 547 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-IDE 178 G+NLQ ++ + L W+ +Q R+ Q + V L + ID Sbjct: 548 SEGINLQQLFTAVLHYDLPWNPNRIEQREGRVDRFGQ----QAKLVKTLLLWGDDNPIDR 603 Query: 179 LVLQRLRTK-STIQD-------------LLLNALKKETI 203 +VL L K IQ +++A+ ++ + Sbjct: 604 IVLNILIRKVRDIQKTTGVSISLGDDTTSIMDAVIRDVL 642 >gi|120609241|ref|YP_968919.1| DEAD-like helicase [Acidovorax citrulli AAC00-1] gi|120587705|gb|ABM31145.1| DEAD-like helicase [Acidovorax citrulli AAC00-1] Length = 757 Score = 40.1 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 6/98 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 636 RREDWIAEQVDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQ------QAARR 689 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G K+ + V +L + L+ + K + Sbjct: 690 SWRIGQKQDIRVIFLGYAASSQMACLKLMAQKIMVAQS 727 >gi|47225441|emb|CAG11924.1| unnamed protein product [Tetraodon nigroviridis] Length = 908 Score = 40.1 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 36/107 (33%), Gaps = 7/107 (6%) Query: 46 KHWKEVHDEKIKALEVII----EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTI 101 K+ L ++ + + + ++V ++ L LQ + + Sbjct: 564 GELSTADSGKLLVLSELLGAIRQLSPSDRVVVVSNYTKTLDLLQDLLDGHMPTGQRQRLV 623 Query: 102 QEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +N L + G GLNL G + LV + + W+ Q Sbjct: 624 DSFNSPFSQNFLFLLSSKAGGLGLNL-VGASHLVLYDIDWNPANDIQ 669 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 14/28 (50%) Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKK 200 TI+E V QR +K + +++ K Sbjct: 779 AGTIEERVFQRQVSKQGLSGTVVDLGKA 806 >gi|308463688|ref|XP_003094116.1| CRE-CUTL-6 protein [Caenorhabditis remanei] gi|308248528|gb|EFO92480.1| CRE-CUTL-6 protein [Caenorhabditis remanei] Length = 1661 Score = 40.1 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 19/156 (12%), Positives = 43/156 (27%), Gaps = 25/156 (16%) Query: 4 YHKFQRELYCDLQGENIEAFNSAS-KTVKCLQLANGAVYYDEEKHWKE----------VH 52 Y + Y +L + N ++ + N A + H + Sbjct: 674 YKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQYDHIYDDAQARLQQLLKS 733 Query: 53 DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK----------DPCT 100 K+ L+ ++ K +++ L LQ+ R + Sbjct: 734 SGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQA 793 Query: 101 IQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVF 134 + +N + G G+NL ++ + Sbjct: 794 LDHYNAPGSTDFAFLLSTRAGGLGINLATADTLISY 829 >gi|282162816|ref|YP_003355201.1| putative ATP-dependent helicase [Methanocella paludicola SANAE] gi|282155130|dbj|BAI60218.1| putative ATP-dependent helicase [Methanocella paludicola SANAE] Length = 765 Score = 40.1 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 72/220 (32%), Gaps = 38/220 (17%) Query: 1 MKQY-HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIK-A 58 +K+Y + + E +A + + GA+ EK+K Sbjct: 302 LKKYFDRLKEEA---GSKGGSKATKRLMQDARL----AGAIRVAGTADEVNPKTEKVKEI 354 Query: 59 LEVIIEKANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPC 99 + +++ ++ IIV +F + + K +G + K Sbjct: 355 VVEQLKEKPSSRIIVFTNFRDTAEFVSRELAAVEGVKPVRFVGQASKLNDKGLSQKKQVE 414 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 + + G+ L A + GL++ ++++F+ Q R G + Sbjct: 415 ILDAFRAGEFNTLIAT-SVAEEGLDIPST-DLVIFYEPVPSEIRSIQRRGRTGRNAVGR- 471 Query: 160 GFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V LI++ T DE + + K +N +K Sbjct: 472 -------VIVLISKGTRDEGTYRVSQAKEKKMYRTMNDMK 504 >gi|119357113|ref|YP_911757.1| helicase domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354462|gb|ABL65333.1| helicase domain protein [Chlorobium phaeobacteroides DSM 266] Length = 958 Score = 40.1 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 4/91 (4%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E + K LL A G+NLQ ++ + L W+ +Q R+ Q Sbjct: 525 RKQKIDEMGKAKHRLLIAT-DCLSEGINLQQQFTAVLHYDLPWNPNRLEQREGRVDRFGQ 583 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 A + +Y A N ID +VL L K Sbjct: 584 P-APEVKTCLLY--GADNPIDGIVLDVLLRK 611 >gi|289650675|ref|ZP_06482018.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. aesculi str. 2250] Length = 733 Score = 40.1 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 6/98 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L I + W R Sbjct: 630 RREDWILDQVDRGVDVLITNPELVKTGLDLLDFPTIAFMQTGWNVYTVQ------QAARR 683 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G K+ V V + + + LQ + K + Sbjct: 684 SWRIGQKQDVRVIFFGSIGSSQITCLQLMAKKIAVSQS 721 >gi|299472761|emb|CBN80329.1| Helicase [Ectocarpus siliculosus] Length = 609 Score = 40.1 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 19/112 (16%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + Q +N G++ LL + GL+LQ + + F LWW++ + Q+I R + Sbjct: 485 ERMRIKQAFNNGEMDLLIIS-KAGSVGLDLQ-CTSKVFMFDLWWNIPQMNQVIGRAIRFK 542 Query: 156 QRQAGFKR---AVFVYY--LIAQNTIDELVLQRLRT--KSTIQDLLLNALKK 200 K V+VY + + K +LL+A+KK Sbjct: 543 SHHEPCKHKHVDVYVYQSVFVTK----------QDKGVKVFDAQVLLDAVKK 584 >gi|256544993|ref|ZP_05472361.1| SNF2 domain protein [Anaerococcus vaginalis ATCC 51170] gi|256399289|gb|EEU12898.1| SNF2 domain protein [Anaerococcus vaginalis ATCC 51170] Length = 46 Score = 40.1 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 27/43 (62%) Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G K V +++++ ++TIDE V + L K+ Q L++++K+ Sbjct: 1 MQGQKETVVIHHILEKDTIDENVKKALERKNKTQATLIDSVKE 43 >gi|239624279|ref|ZP_04667310.1| superfamily protein DNA and RNA helicase [Clostridiales bacterium 1_7_47_FAA] gi|239520665|gb|EEQ60531.1| superfamily protein DNA and RNA helicase [Clostridiales bacterium 1_7_47FAA] Length = 341 Score = 40.1 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 4/63 (6%) Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 W + Q RI Q V VY + + T D + Q + K + Sbjct: 6 LDCPWRPGDLAQRKGRIER----QGNQNPLVHVYRYVTEGTFDAYLWQTVENKQKFISQI 61 Query: 195 LNA 197 + + Sbjct: 62 MTS 64 >gi|331224893|ref|XP_003325118.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309304108|gb|EFP80699.1| DNA repair protein RAD5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 508 Score = 40.1 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 15/129 (11%), Positives = 35/129 (27%), Gaps = 22/129 (17%) Query: 28 KTVKCLQLANGAVY----YDEEKHWKEVHDEKIKA-------LEVIIEKANAAPIIVAYH 76 + Q N ++ + + W+ K+ + N +V Sbjct: 376 QLTMLRQFCNHPLFARSEIEFQPEWRWQDSAKVVHLVNNLKVFLEGVRGINRTKAVVFSS 435 Query: 77 FNSDLARLQ-----------KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNL 125 F L ++ +D + +L A + G G++L Sbjct: 436 FTGFLGIIERALEENNIKSTWLTGDDTPKKRDENLEEFRTNNTCNVLLASVQAGGVGIDL 495 Query: 126 QYGGNILVF 134 + N+ + Sbjct: 496 RCAQNVYMM 504 >gi|7229681|gb|AAF42939.1|AF233659_1 RECQ4 [Drosophila melanogaster] Length = 1530 Score = 40.1 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 49/168 (29%), Gaps = 13/168 (7%) Query: 32 CLQLANGAVYYDEEKHWK----EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 LQL N + + E+I + P + + Sbjct: 1034 LLQLLNSERFEPCQSIIIYCTRRDECERIAGFIRTCVQDRREPTQDQTKKRKRVNWQAEP 1093 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + G + + + ++ ++ A A ++ +++ + E + Q Sbjct: 1094 YHAGMPASRRRTVQKAFMSNELRIVVATIAFGMGINK--PDIRAVIHYNMPRNFESYVQE 1151 Query: 148 IERIGVTRQR-------QAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 I R G A + + N+ID V+++L K Sbjct: 1152 IGRAGRDGLPSHCHLFLDAKGGDQSELRRHVYSNSIDRHVIRKLLQKI 1199 >gi|221119534|ref|XP_002160965.1| PREDICTED: similar to MGC131155 protein [Hydra magnipapillata] Length = 1013 Score = 40.1 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 6/58 (10%), Positives = 14/58 (24%), Gaps = 6/58 (10%) Query: 3 QYHKFQRELYCDLQGEN------IEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDE 54 Y+ F+ E L+ + ++ QL + + Sbjct: 713 LYNMFKNEGRSILESYVKENSLNENFAHVLVVLMRLRQLCCHPKLCMQIVDFASKFSH 770 Score = 39.0 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 4/30 (13%), Positives = 14/30 (46%) Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I +++++E +L+ K + ++ Sbjct: 965 FIVEDSVEEKMLELQEKKRELMSNAFGKME 994 >gi|47225443|emb|CAG11926.1| unnamed protein product [Tetraodon nigroviridis] Length = 2182 Score = 40.1 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 41/169 (24%), Gaps = 45/169 (26%) Query: 22 AFNSASKTVKCLQLANGAVYYDE----------------------------EKHWKEVHD 53 A + +L N Sbjct: 731 AHTHLACITALKKLCNHPALLYSAVQGRADGGSEEPSFYDGLAELFPESYSSGELSTADS 790 Query: 54 EKIKALEVII----EKANAAPIIVAYHFNSDLARLQ----------KAFPQGRTLDKDPC 99 K+ L ++ + + + ++V ++ L LQ + Sbjct: 791 GKLLVLSELLGAIRQLSPSDRVVVVSNYTKTLDLLQDLCVGLGYTFCRLDGHMPTGQRQR 850 Query: 100 TIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + +N L + G GLNL G + LV + + W+ Q Sbjct: 851 LVDSFNSPFSQNFLFLLSSKAGGLGLNL-VGASHLVLYDIDWNPANDIQ 898 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 14/28 (50%) Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKK 200 TI+E V QR +K + +++ K Sbjct: 1008 AGTIEERVFQRQVSKQGLSGTVVDLGKA 1035 >gi|68249315|ref|YP_248427.1| ATP-dependent helicase HepA [Haemophilus influenzae 86-028NP] gi|81336260|sp|Q4QMI0|RAPA_HAEI8 RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|68057514|gb|AAX87767.1| RNA polymerase associated protein homolog [Haemophilus influenzae 86-028NP] Length = 923 Score = 40.1 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 49/155 (31%), Gaps = 18/155 (11%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-----FNSDLARLQKA 87 Q G + + ++KI L ++ I V + ++ Sbjct: 421 RQGVKGFPHRVYHQITLSEENDKIDWLINFLKLHRDEKIFVICQTAATAIQLEQILRERE 480 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPL-------LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + I+ + + G N Q+ N++ F L + Sbjct: 481 AIRAAVFHEKMSIIERDRAAAYFADLENGAQVLLSSSIGSEGRNFQFAANLV-LFDLPTN 539 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + +Q I R+ + G KR V +Y A+++ Sbjct: 540 PDLLEQCIGRLD-----RIGQKRDVQIYVPCAKDS 569 >gi|194336504|ref|YP_002018298.1| helicase domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194308981|gb|ACF43681.1| helicase domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 958 Score = 40.1 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 4/91 (4%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 I E + K LL A G+NLQ ++ + L W+ +Q R+ Q Sbjct: 525 RKQKIDEMGKAKQRLLIAT-DCLSEGINLQQQFTAVLHYDLPWNPNRLEQREGRVDRFGQ 583 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 A + +Y A N ID +VL L K Sbjct: 584 P-APEVKTCLLY--GADNPIDGIVLDVLLRK 611 >gi|292493687|ref|YP_003529126.1| DEAD/DEAH box helicase [Nitrosococcus halophilus Nc4] gi|291582282|gb|ADE16739.1| DEAD/DEAH box helicase domain protein [Nitrosococcus halophilus Nc4] Length = 423 Score = 40.1 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 3/88 (3%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K ++E+ EG P+L A + + + L D E++ I R Sbjct: 289 PQGKRQRLLKEFQEGSYPILVATDVAARGLHI--PTVTHVFNYDLPQDPEDYVHRIGRTA 346 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELV 180 + A Y + I+E + Sbjct: 347 RAGASGSAVSFACEDYAFSLPD-IEEYI 373 >gi|209881267|ref|XP_002142072.1| helicase [Cryptosporidium muris RN66] gi|209557678|gb|EEA07723.1| helicase conserved C-terminal domain-containing protein [Cryptosporidium muris RN66] Length = 1691 Score = 40.1 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 14/136 (10%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKD--------PCTIQEWNE 106 K + + I II+ F L L A K Sbjct: 1531 KGEYCDGFIRINEDDKIILFSDFMEALDLLCAALSINNVSFKKYNGGKNDYHILRDFIKF 1590 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 +L + + G G+ + N ++F + Q I RI + G + Sbjct: 1591 PNNRVLICNTLNVGKGVTM-SVANHIIFVDPLLHEADELQAIGRI-----VRMGQVKTPH 1644 Query: 167 VYYLIAQNTIDELVLQ 182 ++ I +++I++++++ Sbjct: 1645 IWRFIIKDSIEQVLIE 1660 >gi|9367860|emb|CAB97530.1| RAD26L hypothetical protein, alternatively spliced product; similar to (AF217319) putative repair and recombination helicase RAD26L [Mus musculus] [Homo sapiens] Length = 365 Score = 40.1 bits (92), Expect = 0.21, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 17/134 (12%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A+ + Sbjct: 202 KMKVLQQLLNHCRKNRD-KVLLFSFSTKLLDVLQQYCMASG--------------LDYRR 246 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + A + G GLN G N++V F W+ Q Sbjct: 247 LDGSTKSEERLKIVKEFNSTQDVNICLASTMAGGLGLNF-VGANVVVLFDPTWNPANDLQ 305 Query: 147 MIERIGVTRQRQAG 160 I+R +R+ Sbjct: 306 AIDRTQTHCRRERD 319 >gi|119714078|ref|YP_919220.1| helicase domain-containing protein [Nocardioides sp. JS614] gi|119525987|gb|ABL79357.1| helicase domain protein [Nocardioides sp. JS614] Length = 953 Score = 40.1 bits (92), Expect = 0.21, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 4/102 (3%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + + E E + G+NLQ + +V + L W+ H+Q R+ Sbjct: 524 PPAERERRVGELTELDGEHVLVATDCLSEGVNLQEHFSAVVHYDLCWNPTRHEQREGRVD 583 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK-STIQDL 193 Q + RAV +Y N ID +VL L + I Sbjct: 584 RYLQ-RKEVVRAVTLY--GEDNGIDGIVLDVLIRRHRAIAKA 622 >gi|292655877|ref|YP_003535774.1| DNA repair helicase Rad25 [Haloferax volcanii DS2] gi|291370623|gb|ADE02850.1| DNA repair helicase Rad25 [Haloferax volcanii DS2] Length = 470 Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 53/139 (38%), Gaps = 11/139 (7%) Query: 53 DEKIKALEVIIEKANAAPIIVAY---HFNSDLARL--QKAFPQGRTLDKDPCTIQEWNEG 107 +K+ L+ ++++ + +IV F D++R D+ + + G Sbjct: 330 SKKLDTLDNLLKRHHDDRVIVFTANNDFAYDISREFILPCITHQTDTDERTEILDRFRSG 389 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + A G++ N+ + S ++ Q + RI + + + Sbjct: 390 EYS-MLATSQVLDEGID-VPAANVGIILSGSASKRQYAQRLGRILRPTDDR----QPARL 443 Query: 168 YYLIAQNTIDELVLQRLRT 186 Y +I +T++ V QR R Sbjct: 444 YEIITTDTMETYVSQRRRE 462 >gi|72161129|ref|YP_288786.1| helicase, C-terminal:DEAD/DEAH box helicase, N-terminal [Thermobifida fusca YX] gi|71914861|gb|AAZ54763.1| helicase, C-terminal:DEAD/DEAH box helicase, N-terminal [Thermobifida fusca YX] Length = 949 Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 38/126 (30%), Gaps = 10/126 (7%) Query: 69 APIIVAYHFNSDLARLQKAFPQGR-------TLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I H+ ++ R + + + Sbjct: 487 CRYIPTAHYVAEELRQALPKNCAVEAVTSELPPREREDRVAHLAATDRRRVLVATDCLSE 546 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+NL +V + + W+ H+Q R+ Q +A R V +Y A N ID V Sbjct: 547 GVNLHELFPAVVHYDMAWNPVRHEQREGRVDRFGQ-RAKRVRVVTLY--GADNGIDGPVR 603 Query: 182 QRLRTK 187 L K Sbjct: 604 DVLLRK 609 >gi|145633818|ref|ZP_01789541.1| ATP-dependent helicase HepA [Haemophilus influenzae 3655] gi|144985321|gb|EDJ92156.1| ATP-dependent helicase HepA [Haemophilus influenzae 3655] Length = 923 Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 49/155 (31%), Gaps = 18/155 (11%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-----FNSDLARLQKA 87 Q G + + ++KI L ++ I V + ++ Sbjct: 421 RQGVKGFPHRVYHQIILSEENDKIDWLINFLKLHRDEKIFVICQTAATAIQLEQILRERE 480 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPL-------LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + I+ + + G N Q+ N++ F L + Sbjct: 481 AIRAAVFHEKMSIIERDRAAAYFADLENGAQVLLSSSIGSEGRNFQFAANLV-LFDLPTN 539 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + +Q I R+ + G KR V +Y A+++ Sbjct: 540 PDLLEQCIGRLD-----RIGQKRDVQIYVPCAKDS 569 >gi|330960679|gb|EGH60939.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 614 Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 6/98 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L I + W R Sbjct: 492 RREDWILDQVDRGVDVLITNPELVKTGLDLLDFPTIAFMQTGWKVYTVQ------QAARR 545 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G K+ V V + + LQ + K + Sbjct: 546 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQS 583 >gi|21242978|ref|NP_642560.1| plasmid-related protein [Xanthomonas axonopodis pv. citri str. 306] gi|21108482|gb|AAM37096.1| plasmid-related protein [Xanthomonas axonopodis pv. citri str. 306] Length = 766 Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 6/98 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 645 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQ------QAARR 698 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G + + V YL + L+ + K + Sbjct: 699 SWRIGQTQCIKVIYLGYAASSQMSCLKLMAQKIMVAQS 736 >gi|21358123|ref|NP_652607.1| RecQ4 [Drosophila melanogaster] gi|7295152|gb|AAF50477.1| RecQ4 [Drosophila melanogaster] Length = 1579 Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 49/168 (29%), Gaps = 13/168 (7%) Query: 32 CLQLANGAVYYDEEKHWK----EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 LQL N + + E+I + P + + Sbjct: 1083 LLQLLNSERFEPCQSIIIYCTRRDECERIAGFIRTCVQDRREPTQDQTKKRKRVNWQAEP 1142 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQM 147 + G + + + ++ ++ A A ++ +++ + E + Q Sbjct: 1143 YHAGMPASRRRTVQKAFMSNELRIVVATIAFGMGINK--PDIRAVIHYNMPRNFESYVQE 1200 Query: 148 IERIGVTRQR-------QAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 I R G A + + N+ID V+++L K Sbjct: 1201 IGRAGRDGLPSHCHLFLDAKGGDQSELRRHVYSNSIDRHVIRKLLQKI 1248 >gi|218709638|ref|YP_002417259.1| putative RNA polymerase-associated protein RapA [Vibrio splendidus LGP32] gi|218322657|emb|CAV18833.1| putative RNA polymerase-associated protein rapA (ATP-dependent helicase hepA) [Vibrio splendidus LGP32] Length = 1044 Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 33/89 (37%), Gaps = 9/89 (10%) Query: 91 GRTLDKDPCTIQEWNEGK----IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 G ++ + + +L A + G++LQ N L+ + ++ +Q Sbjct: 553 GMDHEEREDVKAAFQTHPEQSDVRILLAT-DAASEGIDLQNHCNCLIHLEIPYNPNVMEQ 611 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 RI Q+ + + +++ + + Sbjct: 612 RNGRIDRHGQK----AKEILIWHPVDAGS 636 >gi|303280441|ref|XP_003059513.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459349|gb|EEH56645.1| predicted protein [Micromonas pusilla CCMP1545] Length = 939 Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 6/103 (5%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 G T + + + G + +++ + Sbjct: 504 FVNIARMGMTRAQRDAALAAFR-GDPDVAVLLLDRAAAEGLDLSFASVVFVMEPLDNTAL 562 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 QQ++ R + G +RAV V L + T +E +L Sbjct: 563 EQQVVSR-----AHRMGQRRAVKVEVLAMRETAEETLLDVQAE 600 >gi|303233872|ref|ZP_07320523.1| helicase C-terminal domain protein [Finegoldia magna BVS033A4] gi|302495016|gb|EFL54771.1| helicase C-terminal domain protein [Finegoldia magna BVS033A4] Length = 249 Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 4/99 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 153 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 212 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 RI Q V ++ + +NT D + R Sbjct: 213 RSGRIVR----QGNENDKVNIFRYVTENTFDAYLWVRHE 247 >gi|307067514|ref|YP_003876480.1| DNA methylase [Streptococcus pneumoniae AP200] gi|306409051|gb|ADM84478.1| DNA methylase [Streptococcus pneumoniae AP200] Length = 2098 Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 4/99 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 RI Q V ++ + +NT D + R Sbjct: 2062 RSGRIVR----QGNENDKVNIFRYVTENTFDAYLWVRHE 2096 >gi|325186727|emb|CCA21274.1| Fbox protein putative [Albugo laibachii Nc14] gi|325187107|emb|CCA21648.1| Fbox protein putative [Albugo laibachii Nc14] Length = 946 Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 17/128 (13%) Query: 70 PIIVAYHFNSDLARLQKAFPQ----------GRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 +IV F + R++ + Q G + + ++ + + Sbjct: 591 KVIVFSQFKEHIWRIRVSCAQQGIRCAAFITGLSATERQRQLKLFRCDPTVQVLCLTDVG 650 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 HGL+L + + + F E + + ++R + G K AV V L+ +++E Sbjct: 651 AHGLDLSFVSH-IFFAD-----EIWDKSLADQVISRAYRIGAKNAVVVEQLVMCGSLEE- 703 Query: 180 VLQRLRTK 187 +L L K Sbjct: 704 ILHGLHDK 711 >gi|269994446|dbj|BAI50387.1| chromodomain helicase DNA binding protein 2 [Leiolepis reevesii rubritaeniata] Length = 230 Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats. Identities = 19/166 (11%), Positives = 45/166 (27%), Gaps = 28/166 (16%) Query: 2 KQYHK--FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 KQY+K R +G + ++ + N + + + Sbjct: 66 KQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCCLIKPPEENERENSQELLQS 125 Query: 53 ----DEKIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---------- 96 K+ L+ ++ + +++ L L + + Sbjct: 126 LIRSSGKLILLDKLLSRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI 185 Query: 97 DPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + +N + G G+NL + +V F W+ Sbjct: 186 RKQALDHFNAEGSEDFCFLLSTRAGGLGINL-ASADTVVIFDSDWN 230 >gi|324118502|gb|EGC12395.1| DEAH ATP-dependent helicase [Escherichia coli E1167] Length = 907 Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 5/88 (5%) Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 LL + GLNLQ G ++ L W+ +Q + RI Q + + V + L Sbjct: 755 LLVVATDAACEGLNLQTLGTLIN-VDLPWNPSRLEQRLGRIKRFGQTR----KFVDMLNL 809 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNAL 198 + T DE V L + + +L Sbjct: 810 VYSETQDEKVYNVLSERLRDTYDIFGSL 837 >gi|331089479|ref|ZP_08338378.1| hypothetical protein HMPREF1025_01961 [Lachnospiraceae bacterium 3_1_46FAA] gi|330404847|gb|EGG84385.1| hypothetical protein HMPREF1025_01961 [Lachnospiraceae bacterium 3_1_46FAA] Length = 412 Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 17/163 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 + N A + + + AL I+EK I+ Y+F+ +L L++ F Sbjct: 250 ITNAAGLCYIWRKIVNTDESRQLALLEIVEKHP--RAIIFYNFDYELELLKELFIPHADT 307 Query: 95 DKDPCTIQEWNEGKIP--------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I EWN K + + G N + ++F+S + + QQ Sbjct: 308 MYFE--IAEWNGHKHQPIPKSESWVYLVQYNAGAEGWN-CIKTDTIIFYSQNYSYKIMQQ 364 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 RI + ++ Y+L +++ ID + + L+ K Sbjct: 365 SAGRIDRLNTP----FKDLYYYHLKSRSGIDLAISKALKEKKD 403 >gi|317057869|ref|YP_004106336.1| DNA mismatch repair protein MutS domain-containing protein [Ruminococcus albus 7] gi|315450138|gb|ADU23702.1| DNA mismatch repair protein MutS domain protein [Ruminococcus albus 7] Length = 3387 Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 34/112 (30%), Gaps = 1/112 (0%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + ++ ++ I ++ G G N+Q + + W ++ Q Sbjct: 3014 YVHDAKNAEEKEKLFEKVRNRDIRVILGSTEKMGAGTNIQDYLYAIHHLDIPWRPSDYDQ 3073 Query: 147 MIERIGVT-RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 R + + + + T D Q + KS + +L + Sbjct: 3074 RNGRGERQGNKCADIGDGQILEFKYSCKGTFDAYRWQTIEGKSIMIKQVLTS 3125 >gi|291337005|gb|ADD96528.1| hypothetical protein [uncultured organism MedDCM-OCT-S11-C29] Length = 3493 Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 4/113 (3%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G + ++ G++ + + G GLN+Q L W ++ +Q R Sbjct: 2159 GMKSAEKRVFGEKMKNGQVRVAIGMTETLGTGLNIQLRMAALHHLDAPWRPQDIEQRNGR 2218 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL---NALKK 200 I + + + T+D + Q+L K+ + LL + +++ Sbjct: 2219 ILRQG-NMYADLEGIEILTYGMERTLDAAIYQKLLIKAQATESLLRGGDDMRE 2270 >gi|253570892|ref|ZP_04848300.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251839841|gb|EES67924.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 1000 Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 45/120 (37%), Gaps = 7/120 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R K + E++ +L S +N+ ++++ W + Sbjct: 848 RPVFVVKGDVAFKKRQSVVTEFDSTVNGILVCTQQSLSSSVNIPTCNDVILESLQWNIPK 907 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL-LNALKKE 201 Q R + K V+Y+ ++++++ ++ + TK + + + + +K++ Sbjct: 908 MEQFY------FRFIRLDSKEQKDVHYVTYKDSVEQNLMALVLTKERLNEFIKMGEVKEQ 961 >gi|157865532|ref|XP_001681473.1| SNF2/RAD54 related DNA helicase [Leishmania major strain Friedlin] gi|68124770|emb|CAJ02339.1| putative SNF2/RAD54 related DNA helicase [Leishmania major strain Friedlin] Length = 958 Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 6/96 (6%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + + + + ++ G+ + +C G++L VF Sbjct: 480 QWARGHCKRAVCIDGRVPVQQRGDLLHAFHRGEAGIAVIGITACAVGISL-APAQCAVFC 538 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L D R R + G + V VYYL+ Sbjct: 539 ELPPDAA-----WMRQAEDRLHRPGQREEVVVYYLL 569 >gi|88859130|ref|ZP_01133771.1| RNA polymerase associated protein (ATP-dependent helicase HepA) [Pseudoalteromonas tunicata D2] gi|88819356|gb|EAR29170.1| RNA polymerase associated protein (ATP-dependent helicase HepA) [Pseudoalteromonas tunicata D2] Length = 964 Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 9/97 (9%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + + +L G N Q+ + LV F L + + + Sbjct: 530 FHEGMSIIERDRAAAFFASEDNAAQVLLCS-EIGSEGRNFQF-AHTLVLFDLPLNPDLLE 587 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 Q I R+ + G V ++ NT E++ + Sbjct: 588 QRIGRLD-----RIGQTEDVQIHVPYFANTAQEVLYR 619 >gi|321464355|gb|EFX75364.1| hypothetical protein DAPPUDRAFT_107980 [Daphnia pulex] Length = 474 Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 15/30 (50%) Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +I Q T++ +L+ + K + + LL Sbjct: 406 TFIQMITQGTVEVRILRLQQEKLAMANGLL 435 >gi|240277039|gb|EER40549.1| MIZ zinc finger protein [Ajellomyces capsulatus H143] gi|325094977|gb|EGC48287.1| MIZ zinc finger protein [Ajellomyces capsulatus H88] Length = 507 Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%) Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K+ V L+ ++T++ELV Q K+ + ++ +K + Sbjct: 223 LTQKKYFMVINLVRKHTVEELVNQLQARKTLSAEQVIREMKNK 265 >gi|268535802|ref|XP_002633036.1| Hypothetical protein CBG05712 [Caenorhabditis briggsae] gi|187034780|emb|CAP26597.1| hypothetical protein CBG_05712 [Caenorhabditis briggsae AF16] Length = 1659 Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 6/80 (7%) Query: 98 PCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR 157 + + +L + C +GLN+ G N ++F Q I RI Sbjct: 1534 KTIVDFDISDDVKILLCPLSLCANGLNMT-GANHIIFLDPPHLQSVLNQAIGRI-----N 1587 Query: 158 QAGFKRAVFVYYLIAQNTID 177 + G +RA+ VY+L+ + ++D Sbjct: 1588 RFGQRRAMRVYHLVVEGSLD 1607 >gi|60593908|pdb|1WP9|A Chain A, Crystal Structure Of Pyrococcus Furiosus Hef Helicase Domain gi|60593909|pdb|1WP9|B Chain B, Crystal Structure Of Pyrococcus Furiosus Hef Helicase Domain gi|60593910|pdb|1WP9|C Chain C, Crystal Structure Of Pyrococcus Furiosus Hef Helicase Domain gi|60593911|pdb|1WP9|D Chain D, Crystal Structure Of Pyrococcus Furiosus Hef Helicase Domain gi|60593912|pdb|1WP9|E Chain E, Crystal Structure Of Pyrococcus Furiosus Hef Helicase Domain gi|60593913|pdb|1WP9|F Chain F, Crystal Structure Of Pyrococcus Furiosus Hef Helicase Domain Length = 494 Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 69/203 (33%), Gaps = 28/203 (13%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 ++LY + + + +A + + + V E D+ + + +++ Sbjct: 302 KKLYEEAKAGSTKASKEIFSDKRMKKAISLLVQAKEIGLDHPKMDKLKEIIREQLQRKQN 361 Query: 69 APIIVAYHFNSD------------------LARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 + IIV ++ + + K +G + + + E+ G+ Sbjct: 362 SKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFN 421 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L A + GL++ +++VF+ + R+ + G V L Sbjct: 422 VLVAT-SVGEEGLDVPEV-DLVVFYEPVPSAIRS--------IQRRGRTGRHMPGRVIIL 471 Query: 171 IAQNTIDELVLQRLRTKSTIQDL 193 +A+ T DE R K I Sbjct: 472 MAKGTRDEAYYWSSRQKEKIMQE 494 >gi|145642183|ref|ZP_01797751.1| ATP-dependent helicase HepA [Haemophilus influenzae R3021] gi|145273107|gb|EDK12985.1| ATP-dependent helicase HepA [Haemophilus influenzae 22.4-21] Length = 634 Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 49/155 (31%), Gaps = 18/155 (11%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-----FNSDLARLQKA 87 Q G + + ++KI L ++ I V + ++ Sbjct: 421 RQGVKGFPHRVYHQITLSEENDKIDWLINFLKLHRDEKIFVICQTAATAIQLEQILRERE 480 Query: 88 FPQGRTLDKDPCTIQEWNEGKIPL-------LFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + + I+ + + G N Q+ N++ F L + Sbjct: 481 AIRAAVFHEKMSIIERDRAAAYFADLENGAQVLLSSSIGSEGRNFQFAANLV-LFDLPTN 539 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 + +Q I R+ + G KR V +Y A+++ Sbjct: 540 PDLLEQCIGRLD-----RIGQKRDVQIYVPCAKDS 569 >gi|124028136|ref|YP_001013456.1| superfamily II DNA/RNA helicase [Hyperthermus butylicus DSM 5456] gi|123978830|gb|ABM81111.1| DNA or RNA helicases of superfamily II [Hyperthermus butylicus DSM 5456] Length = 540 Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 65/212 (30%), Gaps = 37/212 (17%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-----KTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 K+Y K + E G +E A+ + K LQL + + + K+ Sbjct: 350 KKYEKLKNEYKVLSAGRKVEELVKAASAGDERAKKALQL------LSQMRLLVALSRAKL 403 Query: 57 KALEVIIEKA--NAAPIIVAYHFNSDLARLQKA-----FPQGRTLDKDPCTIQEWNEGKI 109 + I++ + I+V + R+ K + + + G+ Sbjct: 404 AEAKRIVDSELAKGSKILVFTQYIEQAERVGKILGAPVITSKTDKARRALAFELFKRGRY 463 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV-- 167 +L G + L R + R + + V Sbjct: 464 RVLVLT----------TVGDEGIDVPDANVGLILSGTSSRRQFIQRLGRLLRPQPGKVSK 513 Query: 168 -YYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 YY+ + T ++ +L+ I + +L ++ Sbjct: 514 LYYIAVRGTAEQAILK------KIAEEVLASM 539 >gi|74197309|dbj|BAC34178.2| unnamed protein product [Mus musculus] gi|74217148|dbj|BAC39257.2| unnamed protein product [Mus musculus] Length = 1393 Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 53/164 (32%), Gaps = 18/164 (10%) Query: 44 EEKHWKEVHDEKIKALEVI-IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 + + ++E I P+I F +G T + ++ Sbjct: 459 CHESRVMIFSSFRDSVEEIAEMLLQHRPVIRVMTFV---GHASGKNTKGFTQKEQLQVVR 515 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ +G L GL++ ++++ F Q + R G RQ + Sbjct: 516 QFRDGGYNTLV-STCVGEEGLDI-GEVDLIICFDAQKSPIRLIQRMGRTGRKRQGR---- 569 Query: 163 RAVFVYYLIAQNTIDELVL-QRLRTKSTIQDLLLNALKKETIHV 205 + ++A+ +E Q K I + + ++ + + Sbjct: 570 ----IVVILAEG-REERTYNQSQSNKKNIYKAI--SGNRQVLRL 606 >gi|330994947|ref|ZP_08318868.1| DNA methylase/helicase SNF2 [Gluconacetobacter sp. SXCC-1] gi|329757931|gb|EGG74454.1| DNA methylase/helicase SNF2 [Gluconacetobacter sp. SXCC-1] Length = 1699 Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 37/113 (32%), Gaps = 4/113 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 R + N G+ +L A+ G G+N Q L + W + + Q Sbjct: 1326 FMQHYRKSAAKQKLFGDLNAGRKRILIGSTATMGTGVNAQQRLKALHHLDVPWLVSDIIQ 1385 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 RI Q + +Y Q ++D Q L K L ++ + Sbjct: 1386 REGRIER----QGNQHAEIELYAYAQQGSVDATNWQLLERKQRFIGLAMSGDR 1434 >gi|154276906|ref|XP_001539298.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150414371|gb|EDN09736.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 476 Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%) Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K+ V L+ ++T++ELV Q K+ + ++ +K + Sbjct: 223 LTQKKYFMVINLVRKHTVEELVNQLQARKTLSAEQVIREMKNK 265 >gi|317131921|ref|YP_004091235.1| hypothetical protein Ethha_0948 [Ethanoligenens harbinense YUAN-3] gi|315469900|gb|ADU26504.1| hypothetical protein Ethha_0948 [Ethanoligenens harbinense YUAN-3] Length = 404 Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 13/109 (11%), Positives = 35/109 (32%), Gaps = 4/109 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + + + +G++ +L + G G N+Q ++ W + Q Sbjct: 8 FIHDANSETQKAELFAKVRKGQVRILLGSTSKMGAGTNVQERLAVIHHADCPWRPRDLTQ 67 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + RQ + ++ + + T D + +K ++ Sbjct: 68 R----DGSGIRQGNLFETIKIFRYVTKGTFDAYNWSLVESKQKFISQVV 112 >gi|170516811|gb|ACB15213.1| ATP-dependent RNA helicase EIF-4A family [uncultured marine group II euryarchaeote DeepAnt-15E7] Length = 596 Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 48/126 (38%), Gaps = 10/126 (7%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + + G T + + ++ G +L A + GL++ ++++F+ Sbjct: 394 QFVGQSSREGRDGLTPKQQIERLDKFRSGSANILVAT-SVGEEGLDIPS-ADLVIFYEPV 451 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 E + R+ + G R V LIA++T DE + ++ + Sbjct: 452 SS--------EIRTIQRRGRTGRHREGEVVVLIAEDTRDEGARASAERREEFMQRAVHRV 503 Query: 199 KKETIH 204 +++ + Sbjct: 504 RRKLLR 509 >gi|291037268|ref|ZP_06568232.1| DNA methylase/helicase SNF2 [Gluconacetobacter xylinus NBRC 3288] Length = 1699 Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 37/113 (32%), Gaps = 4/113 (3%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 R + N G+ +L A+ G G+N Q L + W + + Q Sbjct: 1326 FMQHYRKSAAKQKLFGDLNAGRKRILIGSTATMGTGVNAQQRLKALHHLDVPWLVSDIIQ 1385 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 RI Q + +Y Q ++D Q L K L ++ + Sbjct: 1386 REGRIER----QGNQHAEIELYAYAQQGSVDATNWQLLERKQRFIGLAMSGDR 1434 >gi|238880607|gb|EEQ44245.1| conserved hypothetical protein [Candida albicans WO-1] Length = 1250 Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 18/148 (12%) Query: 58 ALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + + + I+ +F + + R Q + N G I L + A Sbjct: 1088 YYLIELLEILKIRHIIYANFITPIKRAQNLYDFSNYDVDKEE-----NNGGI-CLVMNIA 1141 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 HGLN+ +I + Q+ IE + R + G + V V L + +D Sbjct: 1142 HSSHGLNIIAATHIYFI-----NP-VKQESIEAQAIKRAHRIGQTKEVTVKTLYLKG-VD 1194 Query: 178 E-LVLQRLRTKS---TIQDLLLNALKKE 201 E +L R K +A +KE Sbjct: 1195 ELKILSR-NEKLKNVKNDKESFDAKEKE 1221 >gi|302797108|ref|XP_002980315.1| hypothetical protein SELMODRAFT_444519 [Selaginella moellendorffii] gi|300151931|gb|EFJ18575.1| hypothetical protein SELMODRAFT_444519 [Selaginella moellendorffii] Length = 2030 Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 34/109 (31%), Gaps = 13/109 (11%) Query: 70 PIIVAYHFNSDLARLQK----AFPQGRTLDKDPCT---IQEWNEGKIPLLFAHPASCGHG 122 I+V + L L+ L + I E+ + + ++ +G Sbjct: 1112 KILVFSTWQEVLDLLEHALKSNKLSWVRLKQRRQMGSSILEFKKENVQVMLLPIQHGANG 1171 Query: 123 LNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 LNL ++ + +E + R + G + V+ I Sbjct: 1172 LNL-IEAQHVILVEPLLNPA-----VEAQAINRVHRIGQRLKTLVHRFI 1214 >gi|330508988|ref|YP_004385416.1| DEAD/DEAH box helicase domain-containing protein [Methanosaeta concilii GP-6] gi|328929796|gb|AEB69598.1| DEAD/DEAH box helicase domain protein [Methanosaeta concilii GP-6] Length = 762 Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 13/132 (9%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 +I P I A F + +A +G + K +Q + G+ +L A + Sbjct: 381 LIRFLKEDPKIKAVRFV---GQSSRADDEGLSQKKQAEILQRFRAGEYNVLIAT-SVGEE 436 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 G+++ ++++F+ Q R G R + V L+A+ T DE Sbjct: 437 GIDIPAT-DMVLFYEPVPSEIRSIQRKGRTGRARSGR--------VVVLMARGTRDEAYY 487 Query: 182 QRLRTKSTIQDL 193 K + Sbjct: 488 WISDRKEKTMNK 499 >gi|301114117|ref|XP_002998828.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262110922|gb|EEY68974.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 1702 Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats. Identities = 20/204 (9%), Positives = 55/204 (26%), Gaps = 36/204 (17%) Query: 26 ASKTVKCLQLAN-----------GAVYYDEEKHWKEVHDEKIKALE---VIIEKANAAPI 71 ++ ++ N G K++ LE + + Sbjct: 660 LQLLLRLREICNCVDLVNDMDKLGHADMRLLTSC----SAKLQVLEPLLRRLLLQEGKKV 715 Query: 72 IVAYHFNSDLARLQKA---------FPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHG 122 ++ FN+ L+ G + + + + A Sbjct: 716 VIYCQFNAMFPVLEFFLSLLDINYVRVTGSVAMQRRALCHFADRAVVRVALASTRLSMSN 775 Query: 123 LN---LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 +G ++ W+ ++ + G + VY L +NTI+ Sbjct: 776 GRRAVSVFGSEAIIVVDGDWNATCDAKLR---ASWAKMAVGGADTLPVYRLHCENTIEAS 832 Query: 180 VLQRLRTKSTIQDLLLNALKKETI 203 +L+ + + + + + + + Sbjct: 833 LLRVGAS---LTEKVFGEMSPQEL 853 >gi|153815156|ref|ZP_01967824.1| hypothetical protein RUMTOR_01381 [Ruminococcus torques ATCC 27756] gi|145847724|gb|EDK24642.1| hypothetical protein RUMTOR_01381 [Ruminococcus torques ATCC 27756] Length = 412 Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 17/163 (10%) Query: 35 LANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTL 94 + N A + + + AL I+EK I+ Y+F+ +L L++ F Sbjct: 250 ITNAAGLCYIWRKIVNTDESRQLALLEIVEKHP--RAIIFYNFDYELKLLKELFIPYADT 307 Query: 95 DKDPCTIQEWNEGKIP--------LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 I EWN K + + G N + ++F+S + + QQ Sbjct: 308 MYFE--IAEWNGHKHQPIPESKNWVYLVQYNAGAEGWN-CIKTDTIIFYSQNYSYKIMQQ 364 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 RI + ++ Y+L +++ ID + + L+ K Sbjct: 365 SAGRIDRLNTP----FKDLYYYHLKSRSGIDLAISKALKEKKD 403 >gi|154494255|ref|ZP_02033575.1| hypothetical protein PARMER_03605 [Parabacteroides merdae ATCC 43184] gi|154086117|gb|EDN85162.1| hypothetical protein PARMER_03605 [Parabacteroides merdae ATCC 43184] Length = 949 Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 7/103 (6%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ + + + S G+NLQ+ ++LV + + W+ + +Q I R Sbjct: 485 DRKQALVDHFRTDA--EIMIATESGAEGINLQF-CSLLVNYDMPWNPQRIEQRIGRCHRY 541 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 Q+ A D V + L K + + + + Sbjct: 542 GQKFDVVVVNFVNQLNYA----DCRVYELLNEKFNLFEGVFGS 580 >gi|260893204|ref|YP_003239301.1| helicase domain protein [Ammonifex degensii KC4] gi|260865345|gb|ACX52451.1| helicase domain protein [Ammonifex degensii KC4] Length = 953 Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 56/178 (31%), Gaps = 25/178 (14%) Query: 27 SKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS------- 79 ++ + Q A A + +V E++ +V + + Sbjct: 446 AQRQRLRQFARQAQALCGSEEDTKVVRCAQVVSELL---REGYQPVVWCRYVATAEYVAG 502 Query: 80 DLARLQKAFPQ---------GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGN 130 +L R R + + + +L A G+NLQ Sbjct: 503 ELRRRLAPAFPDLAVEAVTGARPEEDRRGAVLALSRHPRRVLVAT-DCLSEGVNLQDYFT 561 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY-YLIAQNTIDELVLQRLRTK 187 +V + L W+ +Q R+ Q +A +AV +Y N +D VL L K Sbjct: 562 AVVHYDLPWNPNRLEQREGRVDRFGQ-RAKKVKAVLLYGR---DNPVDGAVLDVLLRK 615 >gi|229847516|ref|ZP_04467611.1| ATP-dependent helicase HepA [Haemophilus influenzae 7P49H1] gi|229809579|gb|EEP45307.1| ATP-dependent helicase HepA [Haemophilus influenzae 7P49H1] Length = 923 Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 59/184 (32%), Gaps = 19/184 (10%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + Q+ +L I+ + + Q G + + ++KI L + Sbjct: 392 DEEQQRARQELIQALIDRHGTGRMLFRNTRQGGEGFPHRVYHQITLSEENDKIDWLIDFL 451 Query: 64 EKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPL------- 111 + I+V + ++ + + I+ Sbjct: 452 KLHRDEKILVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAAAYFADLENGAQ 511 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 + + G N Q+ N++ F L + + +Q I R+ + G KR V +Y Sbjct: 512 VLLSSSIGSEGRNFQFATNLV-LFDLPTNPDLLEQCIGRLD-----RIGQKRDVQIYVPC 565 Query: 172 AQNT 175 A+++ Sbjct: 566 AKDS 569 >gi|78190759|gb|ABB29701.1| SNF2 family DNA-dependent ATPase domain-containing protein [Aphrocallistes vastus] Length = 430 Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 20/202 (9%), Positives = 50/202 (24%), Gaps = 63/202 (31%) Query: 3 QYHKFQR-----ELYCDLQGEN------------IEAFNSASKTVKCLQLANGAVYYDEE 45 Y +F R ++ ++ + + + ++ N Sbjct: 229 VYEEFSRTEGNNQILALIKDKEPKKENPEKQFDQSKKSHIFQALQYPRKICNHPSLVIGN 288 Query: 46 KHWKEV----------------HDEKIKALEVIIEKANA----------------APIIV 73 + H K+ AL+ ++ +++ Sbjct: 289 YPTQFDVRKWLKDQNTSLEDVSHSCKLVALKQLLIDCCNSIHSHNNETLIPSLSQHRVLI 348 Query: 74 AYHFNSDLARLQKAFPQ------------GRTLDKDPCTIQEWN-EGKIPLLFAHPASCG 120 L +Q + + + +N + I +L G Sbjct: 349 FCQLKHMLDLIQAMIGRDLPQLSYLRLDGSVPVQNRMNIVNTFNSDPSIDILLLTTHVGG 408 Query: 121 HGLNLQYGGNILVFFSLWWDLE 142 GL L G ++++F W+ Sbjct: 409 LGLTLT-GADVVIFVDHDWNPM 429 >gi|261403402|ref|YP_003247626.1| helicase domain protein [Methanocaldococcus vulcanius M7] gi|261370395|gb|ACX73144.1| helicase domain protein [Methanocaldococcus vulcanius M7] Length = 994 Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 7/98 (7%) Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 I + E +L A GLNLQ ++L+ + W + +Q I R+ + Sbjct: 450 ENINKKFEDCGKILLAT-DVASEGLNLQ-IASVLINYDSPWSPIKLEQRIGRVW-----R 502 Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 G ++ V VY + N +D +L L K L+ Sbjct: 503 LGQEKDVSVYNIFLSNRMDLELLNNLYKKIMNIKNALD 540 >gi|76802558|ref|YP_327566.1| helicase-like protein [Natronomonas pharaonis DSM 2160] gi|76558423|emb|CAI50014.1| helicase homolog [Natronomonas pharaonis DSM 2160] Length = 469 Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 51/139 (36%), Gaps = 11/139 (7%) Query: 53 DEKIKALEVIIEKANAAPIIVAY---HFNSDLARL--QKAFPQGRTLDKDPCTIQEWNEG 107 +K+ L+ ++++ I+ F D+++ D+ ++ + G Sbjct: 329 TKKLDTLDNLLKRHYDDRAIIFTANNDFAYDISQEFVVPCITHQTETDERTAILERFRTG 388 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + +L N+ + S ++ Q + RI + + + Sbjct: 389 EYSMLVTSQVL--DEGIDVPAANVGIILSGSASKRQYAQRLGRILRPTDGR----QPARL 442 Query: 168 YYLIAQNTIDELVLQRLRT 186 Y +IA++T++ V +R R Sbjct: 443 YEIIAEDTVETYVSERRRQ 461 >gi|194098611|ref|YP_002001673.1| Yea [Neisseria gonorrhoeae NCCP11945] gi|193933901|gb|ACF29725.1| Yea [Neisseria gonorrhoeae NCCP11945] Length = 827 Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 21/181 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA-------------RL 84 +++ E + +E K + +++ + +V + Sbjct: 632 LFHTEPQFDEEKISPKEADMLEVVKDSLAKGRKCLVYTVYTDTRDTTGRLKEIFKRHGIK 691 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 D+ +++ + ++ +P GL+L + F +++ Sbjct: 692 AAVMKATVKADQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTL 750 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G K V VY+ +T ++ L+ + K + + + Sbjct: 751 M-----QAARRSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLD 805 Query: 205 V 205 + Sbjct: 806 I 806 >gi|300113246|ref|YP_003759821.1| DEAD/DEAH box helicase domain-containing protein [Nitrosococcus watsonii C-113] gi|299539183|gb|ADJ27500.1| DEAD/DEAH box helicase domain protein [Nitrosococcus watsonii C-113] Length = 431 Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 3/88 (3%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + + +G P+L A + + + L D E++ I R Sbjct: 289 PQGKRQRLLTAFQDGIYPILVATDVAARGLH--VSTVTHVFNYDLPQDPEDYVHRIGRTA 346 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELV 180 + A Y + I+E + Sbjct: 347 RAGASGSAVSFACEDYAFSLPD-IEEYI 373 >gi|331227997|ref|XP_003326666.1| chromodomain helicase hrp1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309305656|gb|EFP82247.1| chromodomain helicase hrp1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 78 Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 19/49 (38%) Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +E + R + G + + V N+I+ + Q R K+ + Sbjct: 4 TWNPAVEEQAIDRLYRIGQQEQIQVVRYCVTNSIEGHIFQIKRRKAELA 52 >gi|312078996|ref|XP_003141983.1| hypothetical protein LOAG_06399 [Loa loa] gi|307762856|gb|EFO22090.1| hypothetical protein LOAG_06399 [Loa loa] Length = 387 Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 6/74 (8%) Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + LL +S GLNL N ++F D+ + Q I RI + G K+A+ V Sbjct: 287 DLKLLVMPMSSGARGLNLTA-ANNIIFVEPQMDISQIAQAIGRID-----RIGQKKAMMV 340 Query: 168 YYLIAQNTIDELVL 181 ++ + +I+E + Sbjct: 341 HHFVVYGSIEEQIY 354 >gi|115531782|ref|YP_784308.1| NPH-1 [Crocodilepox virus] gi|115521135|gb|ABJ09009.1| NPH-1 [Crocodilepox virus] Length = 626 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 79/223 (35%), Gaps = 29/223 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIE 64 + R+ + + A + + LA+ E + + K VII+ Sbjct: 316 DQLGRDFRTEFEDRRFSAG-GLALLTRGEPLAD--AGDLELYNSLYAYSCKFVRACVIIK 372 Query: 65 KANAAPIIVAYHFNSD-----------LARLQKAFPQGRTLDKDPCTIQEWNEGK----- 108 ++ +V F L + RT + + E+N + Sbjct: 373 RSAG-KCLVFEPFVKFSGISVLLEYFRLFEISHVEFSSRTRETRTQLVAEFNAPENTNGE 431 Query: 109 -IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR--QAGFKRAV 165 I AS G++ N ++ + W+ +Q+I R +R + Sbjct: 432 LIKACVFS-ASGNEGISFMSI-NDILILDMTWNESSLKQIIGRALRLNSHVNNVSDRRYL 489 Query: 166 FVYYLIA--QN--TIDELVLQRLRTKSTIQDLLLNALKKETIH 204 V++++A + ++D+ +L ++ KS + L + LK+ +I Sbjct: 490 NVHFIVATLADGLSVDQELLDIIQQKSREFNQLYSVLKRASIE 532 >gi|91079778|ref|XP_967578.1| PREDICTED: similar to rothmund-thomson syndrome DNA helicase recq4 [Tribolium castaneum] Length = 1368 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 9/117 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L+ +A+ G + + + G++ ++ A A ++ +++ + Sbjct: 789 LSYQAEAYHAGLAASRRRTVQKAFMSGELRIVVATVAFGMGINK--SDIRAVIHYNMPKN 846 Query: 141 LEEHQQMIERIGVTRQR-------QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 E + Q I R G A + I N+ID V+++L K + Sbjct: 847 FESYVQEIGRAGRDGLTAHCHLFLDAKGNDENELRRHIFANSIDRHVIRKLLQKIFL 903 >gi|298675601|ref|YP_003727351.1| ERCC4 domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298288589|gb|ADI74555.1| ERCC4 domain protein [Methanohalobium evestigatum Z-7303] Length = 759 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 67/213 (31%), Gaps = 36/213 (16%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEV 61 K Y + RE + A ++ Q+ + ++ + + Sbjct: 307 KYYDRLDREAGLKSGSK---ASKRLAEDPYMQQI--SHRLKECSSEHPKLEMTREIVSKQ 361 Query: 62 IIEKANAAPIIVAYHFN-------------------SDLARLQKAFPQGRTLDKDPCTIQ 102 +E+ + IV ++ + + K +G T + I Sbjct: 362 -LEENPDSRAIVFTNYRDTAEMLANLLSEMDGVYPIRFVGQSSKYNDKGLTQKQQVEIID 420 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ G+ ++ + GL++ ++++F+ Q R ++ + Sbjct: 421 KFKTGEYNVIV-STSVAEEGLDIPST-DLVLFYEPVPSEIRSIQRKGRTARKQEGR---- 474 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTK-STIQDLL 194 V L+ + T DE +K +QD + Sbjct: 475 ----VVVLVTKETRDEAYYWSSVSKERKMQDNM 503 >gi|327401630|ref|YP_004342469.1| helicase domain-containing protein [Archaeoglobus veneficus SNP6] gi|327317138|gb|AEA47754.1| helicase domain protein [Archaeoglobus veneficus SNP6] Length = 746 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 48/131 (36%), Gaps = 13/131 (9%) Query: 61 VIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCG 120 +I + I F + ++ +G + + T++ + G+I +L A + Sbjct: 377 EVIVEELKKEGIPVSRFV---GQAKRFEKKGMSQKEQVETLERFRSGEIKVLVAT-SVGE 432 Query: 121 HGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 GL++ +++VF+ E + R+ + G R + LI + T DE Sbjct: 433 EGLDIPST-DLVVFYEAVPS--------EIRAIQRKGRTGRAREGRIVVLITKGTRDEAY 483 Query: 181 LQRLRTKSTIQ 191 K Sbjct: 484 YWASMRKEKAM 494 >gi|240142783|ref|YP_002967296.1| Helicase domain protein [Methylobacterium extorquens AM1] gi|240012730|gb|ACS43955.1| Helicase domain protein [Methylobacterium extorquens AM1] Length = 919 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 6/98 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ E LL A G+NLQ + +V + L W+ HQQ R+ Sbjct: 496 VPDDRRDRVEGMAEEPQRLLVAT-DCLSEGINLQMLFDAVVHYDLSWNPTRHQQREGRVD 554 Query: 153 VTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKST 189 Q K + L ++ ID VL + K+ Sbjct: 555 RFGQPAPLVKSML----LFGSDSLIDSAVLSVILRKAE 588 >gi|163849725|ref|YP_001637768.1| helicase domain-containing protein [Methylobacterium extorquens PA1] gi|163661330|gb|ABY28697.1| helicase domain protein [Methylobacterium extorquens PA1] Length = 919 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 6/98 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 D ++ E LL A G+NLQ + +V + L W+ HQQ R+ Sbjct: 496 VPDDRRDRVEGMAEEPQRLLVAT-DCLSEGINLQMLFDAVVHYDLSWNPTRHQQREGRVD 554 Query: 153 VTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKST 189 Q K + L ++ ID VL + K+ Sbjct: 555 RFGQPAPLVKSML----LFGSDSLIDSAVLSVILRKAE 588 >gi|311977733|ref|YP_003986853.1| putative transcription termination factor [Acanthamoeba polyphaga mimivirus] gi|82000285|sp|Q5UQU2|YR350_MIMIV RecName: Full=Putative ATP-dependent RNA helicase R350 gi|55416969|gb|AAV50619.1| putative transcription termination factor, VV D6R helicase [Acanthamoeba polyphaga mimivirus] gi|308204776|gb|ADO18577.1| putative transcription termination factor [Acanthamoeba polyphaga mimivirus] Length = 817 Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 23/153 (15%) Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE-WNEGK------IPLLFAHPASCGH 121 +I F + GR KD I+ +N+ ++ P++ Sbjct: 527 FRLIGFNDFTIAREYMGYCEYHGRIDPKDRVRIKNMFNDKNNVYGNKCKVIMLSPSATEG 586 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ--AGFKRAVFVYYLIA------- 172 L +W QQ+I R + +R V +Y Sbjct: 587 IQLL--DIRQEHIMEPYWTEVRIQQVIGRGVRQCSHRDLPMSERIVDIYRYKVIKPENLD 644 Query: 173 -QNTI----DELVLQRLRTKSTIQDLLLNALKK 200 +T+ DE V + ++K+ + + L A+K+ Sbjct: 645 PDDTVRQSTDEYVEDQAKSKANLIESFLGAMKE 677 >gi|270004900|gb|EFA01348.1| RecQ4 [Tribolium castaneum] Length = 1373 Score = 39.3 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 9/117 (7%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 L+ +A+ G + + + G++ ++ A A ++ +++ + Sbjct: 794 LSYQAEAYHAGLAASRRRTVQKAFMSGELRIVVATVAFGMGINK--SDIRAVIHYNMPKN 851 Query: 141 LEEHQQMIERIGVTRQR-------QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 E + Q I R G A + I N+ID V+++L K + Sbjct: 852 FESYVQEIGRAGRDGLTAHCHLFLDAKGNDENELRRHIFANSIDRHVIRKLLQKIFL 908 >gi|224008282|ref|XP_002293100.1| chromodomain-helicase [Thalassiosira pseudonana CCMP1335] gi|220971226|gb|EED89561.1| chromodomain-helicase [Thalassiosira pseudonana CCMP1335] Length = 698 Score = 39.3 bits (90), Expect = 0.35, Method: Composition-based stats. Identities = 16/172 (9%), Positives = 37/172 (21%), Gaps = 38/172 (22%) Query: 4 YHKFQRELYCDL--QGENIEAFNSASKTVKCLQLANGAVYYDE----------------- 44 Y L + A + + ++ + N Sbjct: 524 YKAIYERNTSFLYKGSKPSNAPSLMNIMMELRKCCNHPFLIRGAEDRIIGNDETAYRPID 583 Query: 45 ----EKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLDK-- 96 K L ++ K +++ L LQ+ + Sbjct: 584 YAKLTGEQLVKSSGKFVLLSKLLPKLYDGGHKVLIFSQMVRVLDLLQELLQLKHYRYERL 643 Query: 97 --------DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + ++ + G GLNL + ++ F Sbjct: 644 DGSTSASSRNAAVDRFKRESFKRFVMLLSTRAGGLGLNLTA-ADTVIIFDRS 694 >gi|237801927|ref|ZP_04590388.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024785|gb|EGI04841.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 752 Score = 39.0 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L + F +++ Q R Sbjct: 630 RREDWILDQVDRGVDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 683 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 684 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 741 >gi|406004|gb|AAD10571.1| unknown [Mycoplasma genitalium] Length = 101 Score = 39.0 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 6/88 (6%) Query: 2 KQYHKFQRELYCDLQGENI-EAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 K Y K + + +++ + A N S +K + + + + K A Sbjct: 12 KLYDKQKTDGLKEIKESDAKNALNILSLILKLRHICS---LVKDNDVNDFEDNSKANAAL 68 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK 86 II + N +I+ F ++ ++ Sbjct: 69 NIIYEALENKRKVILFTQFLDVISCFKQ 96 >gi|33359440|ref|NP_877878.1| ERCC4-like helicase/ERCC4-type nuclease [Pyrococcus horikoshii OT3] gi|3258336|dbj|BAA31019.1| 650aa long hypothetical ATP-dependent RNA helicase [Pyrococcus horikoshii OT3] Length = 650 Score = 39.0 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 68/213 (31%), Gaps = 31/213 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ Y + LY + + + A + + + E + + Sbjct: 300 LRVY---LKRLYEEAKAGSTRASKELFLDKRMKKALALLIQAKELGIDHPKMEVLKGLIR 356 Query: 61 VIIEKANAAPIIVAYHFNSD------------------LARLQKAFPQGRTLDKDPCTIQ 102 +++ + IIV ++ + + + +G + + + Sbjct: 357 EQLKRKENSKIIVFTNYRETAKKVVEELMKDGIKARRFVGQASRENDRGMSQKEQKLILD 416 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + +L A + GL++ ++++F+ Q R+ + G + Sbjct: 417 AFARSEFNVLVAT-SVGEEGLDVPEV-DLVIFYEPVPSAIRSVQ--------RRGRTGRQ 466 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V L+AQ T DE R K I + Sbjct: 467 KPGRVVILMAQGTRDEAYYWSSRQKEKIMRETI 499 >gi|225554691|gb|EEH02987.1| MIZ zinc finger protein [Ajellomyces capsulatus G186AR] Length = 515 Score = 39.0 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 22/43 (51%) Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 K+ V L+ ++T++ELV Q KS + ++ +K + Sbjct: 247 LTQKKYFMVINLVRKHTVEELVNQLQARKSLSAEQVIREMKNK 289 >gi|225435359|ref|XP_002282476.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 2356 Score = 39.0 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 15/168 (8%), Positives = 44/168 (26%), Gaps = 17/168 (10%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVI-IEKANAAPIIVAYHFNSDLARLQKAFPQ- 90 + + D + I + D R + Sbjct: 818 RKCCDHPYIVDLSLQSFLTKGLPEIEYLDVGINSIGGSGRDSIGDILDDFLRQRFGQDSY 877 Query: 91 -----GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 G + + ++N + + +C + L + ++ F W+ Sbjct: 878 ERVDGGGVPSRKQAALNKFNNKESGRFVFLLEIRACLSSIKL-SSVDTIIIFDSDWNPVN 936 Query: 144 HQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 + + +I + + ++ L + T++E + K + Sbjct: 937 DLRALNKITID-----SQFEKIKLFRLYSPFTVEEK--SLILAKHDMA 977 >gi|331235570|ref|XP_003330445.1| DNA repair protein rad-5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309309435|gb|EFP86026.1| DNA repair protein rad-5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1289 Score = 39.0 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 16/119 (13%) Query: 46 KHWKEVHDEKIKALEVIIEK----ANAAPIIVAYHFNSDLARLQKAFPQGR--------- 92 K V K++AL + K +V F L +++ + R Sbjct: 1172 KRNDFVSSTKLEALIDHLIKARQTDPGFSAVVFSQFTGFLDLIEQVLKRDRFRFVRLDGT 1231 Query: 93 -TLDKDPCTIQEWNEGKIP-LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIE 149 + K ++ +N+ + P +L G GLNL N + WW+ Q IE Sbjct: 1232 LSTRKRKKALETFNDPRKPCILVCSLKVAGVGLNL-IKANRVYMMDTWWNEAIENQAIE 1289 >gi|193083970|gb|ACF09645.1| ATP dependent RNA helicase [uncultured marine crenarchaeote AD1000-56-E4] Length = 497 Score = 39.0 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 10/112 (8%) Query: 89 PQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G +K T+Q + +G L A GL++ N+++F+ Q Sbjct: 383 QTGLKQEKQIETVQRFRDGVTKALVAT-RVGEEGLDI-SEVNLVIFYDNVPSSIRFIQRK 440 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 R G + LIA++TIDE + K + + + K Sbjct: 441 GRTGRKDTGRL--------VVLIAKDTIDEAYYWIGKRKVKSASNMADKITK 484 >gi|66044710|ref|YP_234551.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. syringae B728a] gi|63255417|gb|AAY36513.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. syringae B728a] Length = 752 Score = 39.0 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L + F +++ Q R Sbjct: 630 RREDWILDQVDRGVDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 683 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 684 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 741 >gi|223934433|ref|ZP_03626354.1| helicase domain protein [bacterium Ellin514] gi|223896896|gb|EEF63336.1| helicase domain protein [bacterium Ellin514] Length = 952 Score = 39.0 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 56/179 (31%), Gaps = 24/179 (13%) Query: 33 LQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHF-----------NS 79 QLAN A + + HD K++A + + +V + S Sbjct: 443 RQLANFARQLESLSGAQ--HDGKLEAAAKTLAEWLRDGFQPVVFCRYLATARYVGEQLRS 500 Query: 80 DLARLQKAFPQGRTLDKDPCTIQEWNEGKI----PLLFAHPASCGHGLNLQYGGNILVFF 135 L K +DP ++ + L G+NLQ ++ + Sbjct: 501 LLKAKFKDLRVEVVTSEDPDDVRRQRVNDLGKVPRRLLVATDCLSEGINLQESFTAVLHY 560 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT-IDELVLQRLRTKSTIQDL 193 L W+ +Q R+ Q V Y L ++ +D LVL + K Sbjct: 561 DLPWNPNRLEQREGRVDRFGQT----AEYVKAYLLFGRDNPVDGLVLGVILEKIRQIRR 615 >gi|256821200|ref|YP_003142399.1| helicase domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256799180|gb|ACV29834.1| helicase domain protein [Anaerococcus prevotii DSM 20548] Length = 2098 Score = 39.0 bits (89), Expect = 0.38, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 4/91 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + T + + G++ +L G G N+Q L + W + +Q Sbjct: 2002 FIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNVQNKLIALHDLDVPWRPSDLEQ 2061 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 RI Q V ++ + +NT D Sbjct: 2062 RSGRIVR----QGNENDRVNIFRYVTENTFD 2088 >gi|242229275|ref|XP_002477702.1| predicted protein [Postia placenta Mad-698-R] gi|220722338|gb|EED77099.1| predicted protein [Postia placenta Mad-698-R] Length = 592 Score = 39.0 bits (89), Expect = 0.38, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 5/74 (6%) Query: 127 YGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 NIL+ W ++ Q+I R+ R + V VY LIA+NT D + Sbjct: 191 ACANILIIIDTLWSAQDDSQLIGRLWRQR-----QLKLVHVYRLIARNTSDVFLNNISFD 245 Query: 187 KSTIQDLLLNALKK 200 KS + + + + + Sbjct: 246 KSIMHNAFMGSSRA 259 >gi|148704700|gb|EDL36647.1| mCG118968 [Mus musculus] Length = 1370 Score = 39.0 bits (89), Expect = 0.38, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 53/164 (32%), Gaps = 18/164 (10%) Query: 44 EEKHWKEVHDEKIKALEVI-IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 + + ++E I P+I F +G T + ++ Sbjct: 427 CHESRVMIFSSFRDSVEEIAEMLLQHRPVIRVMTFV---GHASGKNTKGFTQKEQLQVVR 483 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ +G L GL++ ++++ F Q + R G RQ + Sbjct: 484 QFRDGGYNTLV-STCVGEEGLDI-GEVDLIICFDAQKSPIRLIQRMGRTGRKRQGR---- 537 Query: 163 RAVFVYYLIAQNTIDELVL-QRLRTKSTIQDLLLNALKKETIHV 205 + ++A+ +E Q K I + + ++ + + Sbjct: 538 ----IVVILAEG-REERTYNQSQSNKKNIYKAI--SGNRQVLRL 574 >gi|288928141|ref|ZP_06421988.1| DEAD/DEAH box helicase:Helicase [Prevotella sp. oral taxon 317 str. F0108] gi|288330975|gb|EFC69559.1| DEAD/DEAH box helicase:Helicase [Prevotella sp. oral taxon 317 str. F0108] Length = 1082 Score = 39.0 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 1/108 (0%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE-WNEGKIPLLF 113 K+ + +K N I + A + +K I+E +N P + Sbjct: 851 KVDDAQSFGKKENKENNIRYSMRSHFAAPFGVNAESSQGSEKRATDIREAFNSPFKPFVL 910 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 A + GL+ + ++ ++L + + +Q R+ R Sbjct: 911 ATTSIGQEGLDFHWYCRKVMHWNLPNNPIDFEQREGRVNRYRGMVVRQ 958 >gi|71735168|ref|YP_273040.1| DNA topoisomerase III [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555721|gb|AAZ34932.1| DNA topoisomerase III [Pseudomonas syringae pv. phaseolicola 1448A] Length = 483 Score = 39.0 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L + F +++ Q R Sbjct: 361 RREDWILDQVDRGVDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 414 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 415 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 472 >gi|207347495|gb|EDZ73647.1| YBR245Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 595 Score = 39.0 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 13/157 (8%), Positives = 38/157 (24%), Gaps = 25/157 (15%) Query: 2 KQYHKFQRELYCDLQGENIEAFNS---ASKTVKCLQLANGAVYYD----------EEKHW 48 K Y K + + G N + + ++ + N +D +E Sbjct: 439 KWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLV 498 Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYH----------FNSDLARLQKAFPQGRTLDKDP 98 ++ + K + +++ + + Sbjct: 499 YNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRI 558 Query: 99 CTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILV 133 I ++N + +NL +++ Sbjct: 559 QAIDDYNAPDSKKFCFLINDTCSRVSINLTSADVVVL 595 >gi|16082461|ref|NP_394951.1| RNA helicase (RIG-I) related protein [Thermoplasma acidophilum DSM 1728] gi|10640841|emb|CAC12619.1| RNA helicase (RIG-I) related protein [Thermoplasma acidophilum] Length = 508 Score = 39.0 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 59/186 (31%), Gaps = 20/186 (10%) Query: 26 ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF-------- 77 A+ K + A+G EK + I+ + + Sbjct: 314 ATLRTKLMLAADGYTNPKMEKTLSIMESNVHGNARAIVFTHYRITSDLLMDYIQKNGTSL 373 Query: 78 --NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + + +G + D+ I+++ +L A + + ++F+ Sbjct: 374 KPVRFIGQADRGSDEGLSQDQQKKIIEDFKNNVYNVLIATSIAEEGLDI--PDTDFVIFY 431 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + I+R G T + + G VY L+ +N+ D K + + Sbjct: 432 EAVPS---EIRYIQRKGRTGRSRNGQ-----VYILVFENSRDMAYYYSSIRKVSRMTQTI 483 Query: 196 NALKKE 201 L++E Sbjct: 484 EDLRQE 489 >gi|110668437|ref|YP_658248.1| DNA repair helicase [Haloquadratum walsbyi DSM 16790] gi|109626184|emb|CAJ52640.1| DNA repair helicase [Haloquadratum walsbyi DSM 16790] Length = 692 Score = 39.0 bits (89), Expect = 0.41, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 40/139 (28%), Gaps = 15/139 (10%) Query: 54 EKIKALEVIIEKANAAPIIVAYHFNSDLA-----RLQKAFPQGRTLDKDPCTIQEWNEGK 108 +KI + ++ + A +V + + + + + + Sbjct: 544 QKITTTKKLLGMHSDASALVFVEWLDHGEALADALDAPFVSGEMPHYRRDQVFESFRDDE 603 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ-AGFKRAVFV 167 I +L G++L +V L R G R + + V Sbjct: 604 ISVLVIS-RVGDEGIDLPNAELAVVASGLGGS--------RRQGAQRAGRTMRPTGSAQV 654 Query: 168 YYLIAQNTIDELVLQRLRT 186 Y L + T +E QR Sbjct: 655 YVLATRGTTEEEFAQRQLR 673 >gi|320335744|ref|YP_004172455.1| type III restriction protein res subunit [Deinococcus maricopensis DSM 21211] gi|319757033|gb|ADV68790.1| type III restriction protein res subunit [Deinococcus maricopensis DSM 21211] Length = 471 Score = 39.0 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 12/135 (8%) Query: 53 DEKIKALEVIIEKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDPCTIQEWNEG 107 D K++ LE I+ ++ + L A + + +Q++ G Sbjct: 316 DGKLRVLEEILANHPKDRTLIFTDDNATVYRISREFLIPAITHQTPVKERHALLQKFRSG 375 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + ++ ++ V S ++ I+R+G + QA KRAV + Sbjct: 376 EYRVIVTSRVLNEGVD--VPEASVAVVLSGT---ATEREHIQRLGRILR-QAKDKRAV-L 428 Query: 168 YYLIAQNTIDELVLQ 182 Y ++ + T +E V Q Sbjct: 429 YEVVTEGTSEERVSQ 443 >gi|154305675|ref|XP_001553239.1| predicted protein [Botryotinia fuckeliana B05.10] gi|150853171|gb|EDN28363.1| predicted protein [Botryotinia fuckeliana B05.10] Length = 253 Score = 39.0 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 11/108 (10%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 +++ G + + + +N G ++ +GLN+Q+ + Sbjct: 108 CPCESYNSGLSEVERQELLARFNSGKEDPFVMIMSTKLSAYGLNIQHNCS-----DEIMS 162 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 E + R + G R Y L+ QNT +Q K Sbjct: 163 GTSFSDPQEGQELARIYRIGQTRISRAYKLVVQNTF----MQVRMNKR 206 >gi|157963516|ref|YP_001503550.1| ATP-dependent helicase HepA [Shewanella pealeana ATCC 700345] gi|189029433|sp|A8H8X8|RAPA_SHEPA RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|157848516|gb|ABV89015.1| SNF2-related protein [Shewanella pealeana ATCC 700345] Length = 968 Score = 39.0 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 6/133 (4%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + + + K + +I +A A + + + +++D E Sbjct: 498 FLKNNRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMSIIERDKAGAYFAQESGG 557 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 G N Q+ N++ F L + + +Q I R+ + G K V ++ Sbjct: 558 AQALICSEIGSEGRNFQFASNLV-LFDLPLNPDLLEQRIGRLD-----RIGQKNDVEIHL 611 Query: 170 LIAQNTIDELVLQ 182 NT E ++Q Sbjct: 612 PFLANTAQERLMQ 624 >gi|20088995|ref|NP_615070.1| Hef nuclease [Methanosarcina acetivorans C2A] gi|19913848|gb|AAM03550.1| helicase [Methanosarcina acetivorans C2A] Length = 821 Score = 39.0 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 35/113 (30%), Gaps = 10/113 (8%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 +G T + + ++ G+ +L A L +V F E Sbjct: 401 NKNKGLTQKQQAEILDKFRAGEYNVLVAT---SVAEEGLDIPATDMVLF-----YEPIPS 452 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 I I + K V V L+ + T DE + K ++ L+ Sbjct: 453 EIRSIQRKGRTGRQQKGRVIV--LVTKGTRDEAYYWSSKNKEKRMLKSMHGLE 503 >gi|213972020|ref|ZP_03400116.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. tomato T1] gi|213923236|gb|EEB56835.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. tomato T1] Length = 752 Score = 39.0 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L + F +++ Q R Sbjct: 630 RREDWILDQVDRGVDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 683 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 684 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 741 >gi|253567590|ref|ZP_04845001.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251841663|gb|EES69743.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 1000 Score = 39.0 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 63/197 (31%), Gaps = 18/197 (9%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 +A + +K L A + + + + K + +E +I K + Sbjct: 771 GDAKKDAGLRLMRQIKLLIKACSVPHLIDGYFGDGIPN-KTRYIEKLIRKIPGKVAVGCT 829 Query: 76 HF-----------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 R T K + E++ +L S +N Sbjct: 830 SIAAFDLYENHLRECFPNRPVFVVKGDVTFKKRQSIVTEFDSTVNGILVCTQQSLSSSVN 889 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 + ++++ W + Q R + K V+Y+ ++++++ ++ + Sbjct: 890 IPTCNDVILESLQWNIPKMEQFY------FRFIRLDSKELKDVHYVTYKDSVEQNLMALV 943 Query: 185 RTKSTIQDLLLNALKKE 201 TK + + + + KE Sbjct: 944 LTKERLNEFIKSGEVKE 960 >gi|189466897|ref|ZP_03015682.1| hypothetical protein BACINT_03279 [Bacteroides intestinalis DSM 17393] gi|189435161|gb|EDV04146.1| hypothetical protein BACINT_03279 [Bacteroides intestinalis DSM 17393] Length = 1000 Score = 39.0 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 22/203 (10%), Positives = 64/203 (31%), Gaps = 23/203 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK----CLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +F R ++ + ++ ++ + ++ + + K + +E Sbjct: 757 EEFCRICELYYNSTGDTKKDAGLRLMRQIKLLIKACSVPHLIS--GYYGDDYPSKTRYIE 814 Query: 61 VIIEKANAAPIIV-----------AYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 +I K I +Y R K + E++ Sbjct: 815 SLIRKIPGKVAIGCTTLAAFDLYESYIRERFPDRPIYVVKGDVAFKKRQSIVTEFDSTIN 874 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L S +N+ ++++ W + Q R + K V+Y Sbjct: 875 GILICTQQSLSSSVNIPTCNDVILESLQWNIPKMEQFY------FRFIRLDSKEMKDVHY 928 Query: 170 LIAQNTIDELVLQRLRTKSTIQD 192 + ++++++ ++ + TK + + Sbjct: 929 VTYEDSVEQNLMALVLTKERLNE 951 >gi|17566484|ref|NP_507903.1| hypothetical protein Y113G7B.14 [Caenorhabditis elegans] gi|5824699|emb|CAB54333.1| C. elegans protein Y113G7B.14, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 540 Score = 39.0 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 13/114 (11%), Positives = 36/114 (31%), Gaps = 8/114 (7%) Query: 76 HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFF 135 F +T++ + + + + ++F + +G ++ Sbjct: 416 QFPEIFDIKHPNARITKTINIIQEVLMKKEKVTVSVVFLSERAGAIN---LHGATHVILL 472 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + W+L Q+ + K V ++ + T ++ V + KS Sbjct: 473 GMHWNLALEQE-----ACSCVCNIAQKNIVTIHRIKVAGTNEDDVEKAQDDKSD 521 >gi|15921551|ref|NP_377220.1| hypothetical protein ST1287 [Sulfolobus tokodaii str. 7] gi|15622337|dbj|BAB66329.1| 543aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 543 Score = 39.0 bits (89), Expect = 0.44, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 50/152 (32%), Gaps = 14/152 (9%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQG-----RTLD 95 Y+E K + + K+KAL+ II+K N I++ + + K + + Sbjct: 384 IYNEMKKIVNLAENKLKALDDIIQKENGNKILIFTQYVDQAEEIAKKYNAYLITGKTNKN 443 Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + ++ + K +L L + + + R Sbjct: 444 EREKILRIFKTLKSGILVLTTV---GDEGLDIPDANVGIIVT----GTGSRRQFIQRLGR 496 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + + +Y ++ + T +E Q + K Sbjct: 497 LLRPSNGKVARLYEIVTRGTAEE--YQASKRK 526 >gi|284165293|ref|YP_003403572.1| type III restriction protein res subunit [Haloterrigena turkmenica DSM 5511] gi|284014948|gb|ADB60899.1| type III restriction protein res subunit [Haloterrigena turkmenica DSM 5511] Length = 488 Score = 39.0 bits (89), Expect = 0.46, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 58/189 (30%), Gaps = 31/189 (16%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + + G + EA + + ++ K++AL+ I+ Sbjct: 325 YQELVKRS-----GSDPEAREALLARQRAREI-------------MFGSAAKLEALDEIL 366 Query: 64 EKANAAPIIVAYHF------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPA 117 + IV S+ + Q ++ + + ++ Sbjct: 367 DDHRGERTIVFTAHNDLAYDVSERFLIPTITHQTGAAERREILERFREGTYTRIATSNVL 426 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTID 177 G + ++ V S E Q + RI + +Y ++A++T + Sbjct: 427 DEGVDV---PDASVAVVLSGSGSEREFTQRLGRILRPKTDGGRA----LLYEVVAEDTGE 479 Query: 178 ELVLQRLRT 186 E + +R R Sbjct: 480 ERIARRRRD 488 >gi|315230780|ref|YP_004071216.1| ATP-dependent RNA helicase [Thermococcus barophilus MP] gi|315183808|gb|ADT83993.1| ATP-dependent RNA helicase [Thermococcus barophilus MP] Length = 770 Score = 39.0 bits (89), Expect = 0.46, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 68/209 (32%), Gaps = 29/209 (13%) Query: 9 RELYCDLQGENIEAFNS-ASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 R L E N + + + + + D+ + ++ +EK Sbjct: 298 RAYLKRLYEERQTKSNKELMSDPRMKKAVSLLIQARDLGLDHPKMDKLKELIKEQLEKKP 357 Query: 68 AAPIIVAYHFN------------------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + IIV ++ + + + +G + K + +++G Sbjct: 358 NSKIIVFTNYRDTAKKIVKELVDMGIKVSRFVGQASRENDRGMSQKKQKEILDLFSQGIF 417 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L A + GL++ +++VF+ + R+ + G + V Sbjct: 418 NVLVAT-SVGEEGLDVPEV-DLVVFYEPVPSAIRS--------IQRRGRTGRHKPGRVVI 467 Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 L+A+ T DE R K +L + Sbjct: 468 LMAKGTRDEAYYWSSRHKEKQMIAVLKKV 496 >gi|253566979|ref|ZP_04844431.1| helicase domain-containing protein [Bacteroides sp. 3_2_5] gi|251944542|gb|EES85031.1| helicase domain-containing protein [Bacteroides sp. 3_2_5] Length = 974 Score = 39.0 bits (89), Expect = 0.46, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 4/95 (4%) Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 ++ I + K +L A G+NLQ N ++ + L W+ +Q R+ Sbjct: 540 DEQRRDLIDSIHPDKPRILVAT-DCLSEGINLQELFNAVLHYDLPWNPNRIEQRDGRVDR 598 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 Q K L N +D++V L K Sbjct: 599 FGQESPRIK---TFILLGENNDVDKIVWDVLIKKI 630 >gi|18976936|ref|NP_578293.1| ATP-dependent RNA helicase hepa, putative [Pyrococcus furiosus DSM 3638] gi|18892556|gb|AAL80688.1| ATP-dependent RNA helicase hepa, putative [Pyrococcus furiosus DSM 3638] Length = 940 Score = 38.6 bits (88), Expect = 0.46, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 54/190 (28%), Gaps = 33/190 (17%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII--EKANAAPIIVAYHFNSDLA--- 82 + + ++ E D K++ + I+ N +I+ F L Sbjct: 356 QLERLRRV-------LELGKKIGSKDSKLEVISDIVAYHIRNGEKVIIFTEFRDTLEYVL 408 Query: 83 --------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPL-LFAHPASCGHGLNLQY 127 + + K +E N+ L GLNL Sbjct: 409 ERLPDILRRKHGIVLEKDDIAKLHGGMKSEEIEREINKFHERANLLVSTDVASEGLNLH- 467 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 ++++ + W + +Q + RI Q + +A T D VL L K Sbjct: 468 VASVVINYEAPWSPIKLEQRVGRIWRLNQTRETKA----YTIFLATET-DLDVLNNLYRK 522 Query: 188 STIQDLLLNA 197 + + Sbjct: 523 IMNIKEAVGS 532 >gi|242091650|ref|XP_002436315.1| hypothetical protein SORBIDRAFT_10g000300 [Sorghum bicolor] gi|241914538|gb|EER87682.1| hypothetical protein SORBIDRAFT_10g000300 [Sorghum bicolor] Length = 414 Score = 38.6 bits (88), Expect = 0.47, Method: Composition-based stats. Identities = 21/200 (10%), Positives = 54/200 (27%), Gaps = 41/200 (20%) Query: 32 CLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR-------- 83 Q + D+ D I + I ++ +++ + Sbjct: 1 MQQCCDHPYLVDQSLQSTLTKDHPITDILDIGVRSCGKLLLLDRMLQQIRIQGLRVLILS 60 Query: 84 -------------------------LQKAFPQGRTLDKDPCTIQEWNEGKI--PLLFAHP 116 + +G L K + +N+ + Sbjct: 61 QSGGGSGNPMGDILDDFVRQRFGYESYERVERGLLLQKKQTAMNMFNDKTKGRFIFLIDS 120 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 +CG + L + ++ + W+ M + + + V ++ L + T+ Sbjct: 121 RACGSSIKL-SSVDAIIIYGSDWNP-----MNDLRALQKVSMESQSEPVPIFRLYSSCTV 174 Query: 177 DELVLQRLRTKSTIQDLLLN 196 +E L + + +LN Sbjct: 175 EEKALILAKHDHILDSNILN 194 >gi|114330135|ref|YP_746357.1| helicase domain-containing protein [Nitrosomonas eutropha C91] gi|114307149|gb|ABI58392.1| helicase domain protein [Nitrosomonas eutropha C91] Length = 758 Score = 38.6 bits (88), Expect = 0.48, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 35/110 (31%), Gaps = 6/110 (5%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I E + I +L +P GL+L I+ S + R Sbjct: 636 RREDWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYTLQ------QAARR 689 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + G K AV V YL T L + K + + + + V Sbjct: 690 SWRIGQKLAVRVIYLGYAATSQMTCLTLMAKKILVSQSTSGDVPESGLDV 739 >gi|213971934|ref|ZP_03400033.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. tomato T1] gi|213923305|gb|EEB56901.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. tomato T1] Length = 752 Score = 38.6 bits (88), Expect = 0.48, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L + F +++ Q R Sbjct: 630 RREDWILDQVDRGVDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 683 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 684 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 741 >gi|14591755|ref|NP_143722.1| Hef nuclease [Pyrococcus horikoshii OT3] Length = 748 Score = 38.6 bits (88), Expect = 0.48, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 68/213 (31%), Gaps = 31/213 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ Y + LY + + + A + + + E + + Sbjct: 300 LRVY---LKRLYEEAKAGSTRASKELFLDKRMKKALALLIQAKELGIDHPKMEVLKGLIR 356 Query: 61 VIIEKANAAPIIVAYHFNSD------------------LARLQKAFPQGRTLDKDPCTIQ 102 +++ + IIV ++ + + + +G + + + Sbjct: 357 EQLKRKENSKIIVFTNYRETAKKVVEELMKDGIKARRFVGQASRENDRGMSQKEQKLILD 416 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + +L A + GL++ ++++F+ Q R+ + G + Sbjct: 417 AFARSEFNVLVAT-SVGEEGLDVPEV-DLVIFYEPVPSAIRSVQ--------RRGRTGRQ 466 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 + V L+AQ T DE R K I + Sbjct: 467 KPGRVVILMAQGTRDEAYYWSSRQKEKIMRETI 499 >gi|149200190|ref|ZP_01877213.1| ATP-dependent helicase HepA [Lentisphaera araneosa HTCC2155] gi|149136727|gb|EDM25157.1| ATP-dependent helicase HepA [Lentisphaera araneosa HTCC2155] Length = 943 Score = 38.6 bits (88), Expect = 0.49, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 6/125 (4%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 EK+ ++I + + + F +G +L++ +++ L Sbjct: 470 KEKVDEKFLLICSSREKVEAIEQGIRQHMELKMAVFHEGLSLNQRDRNAVFFSQDTGARL 529 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 G N Q+ L+ F L + +Q I R+ + G + ++Y Sbjct: 530 LICSEIGSEGRNFQF-CQNLILFDLPMNPGLLEQRIGRLD-----RIGQTADIQIFYPYR 583 Query: 173 QNTID 177 +++++ Sbjct: 584 KSSVE 588 >gi|255263853|ref|ZP_05343195.1| helicase domain protein, putative [Thalassiobium sp. R2A62] gi|255106188|gb|EET48862.1| helicase domain protein, putative [Thalassiobium sp. R2A62] Length = 927 Score = 38.6 bits (88), Expect = 0.49, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 6/78 (7%) Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ---RQAGFKRAVF--- 166 GLNL +VFF+L W Q+I R+ R + R+V Sbjct: 424 LIMEEFVEAGLNLHNFAADMVFFNLPWQAARIDQLIGRLDRLRSGGLKSYLDDRSVGTIG 483 Query: 167 VYYLIAQNTIDELVLQRL 184 ++ ++ + DE VL+ L Sbjct: 484 IWRMVVVGSADERVLEAL 501 >gi|212692341|ref|ZP_03300469.1| hypothetical protein BACDOR_01837 [Bacteroides dorei DSM 17855] gi|212665218|gb|EEB25790.1| hypothetical protein BACDOR_01837 [Bacteroides dorei DSM 17855] Length = 1000 Score = 38.6 bits (88), Expect = 0.50, Method: Composition-based stats. Identities = 22/203 (10%), Positives = 63/203 (31%), Gaps = 23/203 (11%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK----CLQLANGAVYYDEEKHWKEVHDEKIKALE 60 +F R ++ + ++ ++ + ++ + + K + +E Sbjct: 757 EEFCRICELYYNSTGDTKKDAGLRLMRQIKLLIKACSVPHLIS--GYYGDDYPSKTRYIE 814 Query: 61 VIIEKANAAPIIVA-----------YHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 +I K I Y R K + E++ Sbjct: 815 SLIRKIPGKVAIGCTTLAAFDLYEKYISERFPDRPIYVVKGDVAFKKRQSIVTEFDSTIN 874 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L S +N+ ++++ W + Q R + K V+Y Sbjct: 875 GILICTQQSLSSSVNIPTCNDVILESLQWNIPKMEQFY------FRFIRLDSKEMKDVHY 928 Query: 170 LIAQNTIDELVLQRLRTKSTIQD 192 + ++++++ ++ + TK + + Sbjct: 929 VTYEDSVEQNLMALVLTKERLNE 951 >gi|58428518|gb|AAW77555.1| ATP-dependent RNA helicase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 647 Score = 38.6 bits (88), Expect = 0.50, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 61/192 (31%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E I A + Q + + DEK L + Sbjct: 283 AYEHMNEPEKLVVETETITAA-------RVRQ-----------RIYFPSDDEKQTLLLGL 324 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + + + R+ + + K + + +G++ +L Sbjct: 325 LSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 384 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 385 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSL 442 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 443 PD-IEAYIEQKI 453 >gi|84625712|ref|YP_453084.1| ATP-dependent RNA helicase RhlB [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|161898959|ref|YP_202940.2| ATP-dependent RNA helicase RhlB [Xanthomonas oryzae pv. oryzae KACC10331] gi|188574752|ref|YP_001911681.1| ATP-dependent RNA helicase RhlB [Xanthomonas oryzae pv. oryzae PXO99A] gi|67461243|sp|Q5GUR8|RHLB_XANOR RecName: Full=ATP-dependent RNA helicase rhlB gi|84369652|dbj|BAE70810.1| ATP-dependent RNA helicase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519204|gb|ACD57149.1| ATP-dependent RNA helicase RhlB [Xanthomonas oryzae pv. oryzae PXO99A] Length = 574 Score = 38.6 bits (88), Expect = 0.50, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 61/192 (31%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E I A + Q + + DEK L + Sbjct: 210 AYEHMNEPEKLVVETETITAA-------RVRQ-----------RIYFPSDDEKQTLLLGL 251 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + + + R+ + + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|321475032|gb|EFX85996.1| DNA helicase RecQ4 [Daphnia pulex] Length = 1253 Score = 38.6 bits (88), Expect = 0.50, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 42/118 (35%), Gaps = 9/118 (7%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 ++ +A+ G T + +++ GK+ ++ A A ++ ++ Sbjct: 820 RRGISWSAEAYHAGLTAARRSSVQKQFMTGKMKIVVATVAFGMGINK--SDIRAIIHYNA 877 Query: 138 WWDLEEHQQMIERIGVTRQR-------QAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 + E + Q I R G + + + I N+ D VL++L K Sbjct: 878 PKNFENYVQEIGRAGRDGLPAHCHVFLNSEGRDLQELKRFIYANSTDRHVLRKLMRKI 935 >gi|296118323|ref|ZP_06836904.1| putative ATP-dependent DNA helicase [Corynebacterium ammoniagenes DSM 20306] gi|295968881|gb|EFG82125.1| putative ATP-dependent DNA helicase [Corynebacterium ammoniagenes DSM 20306] Length = 543 Score = 38.6 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 42/130 (32%), Gaps = 10/130 (7%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDL-----ARLQKAFPQGRTLDKDPCTIQEWNEG 107 D K +A+ II+K +++ + L + + + G Sbjct: 393 DAKFEAVREIIDKHAQQQMLIIGGYVEQLEDIAARLDAPLIHGRTSNAEREKLFDAFRNG 452 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +I +L ++L + + +E Q + R+ + Sbjct: 453 EIQVLVVS-KVANFSIDLPEAAVAIQLSGTFGSRQEEAQRLGRLLRPKADGGEATF---- 507 Query: 168 YYLIAQNTID 177 Y L+ +++ID Sbjct: 508 YTLVTRDSID 517 >gi|328724641|ref|XP_003248208.1| PREDICTED: e3 ubiquitin-protein ligase SHPRH-like [Acyrthosiphon pisum] Length = 88 Score = 38.6 bits (88), Expect = 0.52, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 6/67 (8%) Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 + GLNL + F + + E + + G + FV+ I + Sbjct: 1 MKLSVGSKGLNLTE-ATRIFFMEPIINKAD-----EHQAIGTIYRLGQTKPTFVHNFIIR 54 Query: 174 NTIDELV 180 ++I+E + Sbjct: 55 DSIEENI 61 >gi|302306298|ref|NP_982512.2| AAL030Cp [Ashbya gossypii ATCC 10895] gi|299788451|gb|AAS50336.2| AAL030Cp [Ashbya gossypii ATCC 10895] Length = 1539 Score = 38.6 bits (88), Expect = 0.52, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 7/86 (8%) Query: 98 PCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + + +I L GL L + + E + R Sbjct: 1395 AKVVETFKADPEITCLLLDTKRQASGLTL-INATHVFLLEPIVNNST-----EFQAINRI 1448 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQ 182 + G +V++ + NT++ +L+ Sbjct: 1449 HRIGQTSETYVWHFMLLNTVEHSILR 1474 >gi|311258239|ref|XP_003127500.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 1-like [Sus scrofa] Length = 880 Score = 38.6 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 60/202 (29%), Gaps = 25/202 (12%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKAN 67 +++ + DL ++I ++ L + +W + +E I + Sbjct: 145 KKDDFVDLLLQHIGTSAIMDLLLRLLTCVERPQLRQDVVNWLNEEKIVQRLIEQIHPSKD 204 Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQY 127 + A D+ RL IQ + + L A L Sbjct: 205 DSQHSNASQSLCDIIRL-----------SREQVIQVQDSPEPDQLLATLEKQETIEQLLS 253 Query: 128 GGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 + I+ + + + +V V ++ ++D L+ L Sbjct: 254 -----NMLEGEQNPSVIVSGIQVLLTLLEPRRPRSESVSVNNFLS--SVDGQ-LELLAQ- 304 Query: 188 STIQDLL-----LNALKKETIH 204 +T+ + L+AL+ H Sbjct: 305 ATLDSAVCSVGALHALRPRLSH 326 >gi|268596846|ref|ZP_06131013.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268550634|gb|EEZ45653.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] Length = 785 Score = 38.6 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 21/181 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA-------------RL 84 +++ E + +E K + +++ + +V + Sbjct: 590 LFHTEPQFDEEEISPKEADMLEVVKDSLAKGRKCLVYTVYTDTRDTTGRLKEIFKRHGIK 649 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 D+ +++ + ++ +P GL+L + F +++ Sbjct: 650 AAVMKATVKADQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTL 708 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G K V VY+ +T ++ L+ + K + + + Sbjct: 709 M-----QAARRSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLD 763 Query: 205 V 205 + Sbjct: 764 I 764 >gi|301381880|ref|ZP_07230298.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. tomato Max13] Length = 159 Score = 38.6 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + I +L +P GL+L + F +++ Q R Sbjct: 37 RREDWILDQVDRGIDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 90 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 91 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 148 >gi|301061062|ref|ZP_07201859.1| conserved domain protein [delta proteobacterium NaphS2] gi|300444856|gb|EFK08824.1| conserved domain protein [delta proteobacterium NaphS2] Length = 207 Score = 38.6 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 17/39 (43%) Query: 150 RIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKS 188 R R + K+ V VY+L T+ +++ + K Sbjct: 22 RQASRRSWRIPQKKPVKVYFLAYSGTMQTRLMRLMADKL 60 >gi|218189907|gb|EEC72334.1| hypothetical protein OsI_05543 [Oryza sativa Indica Group] Length = 2670 Score = 38.6 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 21/207 (10%), Positives = 56/207 (27%), Gaps = 46/207 (22%) Query: 18 ENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEVH--------------DEKIKALE 60 +E + + + + + +E + K+ L+ Sbjct: 790 SEMETDSVGALHDIYLSLKKCCDHPYIVNEFLRSSLSNNSNVTENIDTVVHASGKLLVLD 849 Query: 61 VIIEKANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKD----------PCTI 101 ++ + + V F SD + G + I Sbjct: 850 KMLNEIKKKSLRVILLFQSDRAGGNKMGNILEDLMHHRFGPESYERVEYRAVLSRKQAAI 909 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++N + +C + L + ++ + + + +++I + Sbjct: 910 DKFNNKTNGRFVFLIENRACLPSIKLSSI-DAIIIYGSDNNPLNDLKALQKIKIE----- 963 Query: 160 GFKRAVFVYYLIAQNTIDEL--VLQRL 184 V ++ L T++E VL R Sbjct: 964 SQFERVSIFRLYTPFTVEEKSLVLARQ 990 >gi|257486911|ref|ZP_05640952.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 665 Score = 38.6 bits (88), Expect = 0.55, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L + F +++ Q R Sbjct: 543 RREDWILDQVDRGVDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 596 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 597 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 654 >gi|325577154|ref|ZP_08147638.1| RNA polymerase-associated protein RapA [Haemophilus parainfluenzae ATCC 33392] gi|325160736|gb|EGC72857.1| RNA polymerase-associated protein RapA [Haemophilus parainfluenzae ATCC 33392] Length = 920 Score = 38.6 bits (88), Expect = 0.55, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 8/145 (5%) Query: 33 LQLANGAVYYDEEKHW--KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 Q+ A DE+ HW + + + + VI + A A + + R + Sbjct: 433 HQVTIDAAEVDEKIHWLIDFLKSHRNEKILVICKTAQTAIQLEQILREKEAIRSAVFHER 492 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 +++D + + + G N Q+ +++ F L + + +Q I R Sbjct: 493 MSIIERDRAAAYFADTDNGAQVLLSSSIGSEGRNFQFACHLV-LFDLPENPDLLEQCIGR 551 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNT 175 + + G R V +Y + Sbjct: 552 LD-----RIGQMRDVQIYVPCLSGS 571 >gi|313217669|emb|CBY38714.1| unnamed protein product [Oikopleura dioica] Length = 882 Score = 38.6 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 11/166 (6%), Positives = 34/166 (20%), Gaps = 32/166 (19%) Query: 2 KQYHKFQRELYCDLQGE--NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------- 52 K Y + L + + ++ + N + Sbjct: 681 KYYRAILERNFDFLSKGASTGNVPSLMNTMMELRKCCNHPFLIKGAEDKIIDEYRAKGEV 740 Query: 53 ----------DEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDK---- 96 K+ + ++ K +++ L L+ Q + Sbjct: 741 ADPLTSIVQASGKMVLIHKLLPKLKAGGHKVLIFSQMIRVLDILEDYLYQMSMGFERLDG 800 Query: 97 ------DPCTIQEWNEGKI-PLLFAHPASCGHGLNLQYGGNILVFF 135 I + + + + + + N + Sbjct: 801 RIRGNDRQAAIDRFCKTRFGQIRVSSLHTRWRTRNKPHCCRHCYHL 846 >gi|282897538|ref|ZP_06305539.1| hypothetical protein CRD_00704 [Raphidiopsis brookii D9] gi|281197633|gb|EFA72528.1| hypothetical protein CRD_00704 [Raphidiopsis brookii D9] Length = 594 Score = 38.6 bits (88), Expect = 0.58, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 4/95 (4%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 + ++ + E +L A G+NLQ + + + L W+ +Q RI Sbjct: 170 SEEEREIRLTELKNYSRRVLVAT-DCLSEGINLQTHFSAAIHYDLPWNPNRLEQREGRID 228 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTK 187 Q K + N +D VL L K Sbjct: 229 RYGQTAPIVKSCLLYGR---DNPVDGAVLDVLIRK 260 >gi|298707958|emb|CBJ30329.1| conserved unknown protein [Ectocarpus siliculosus] Length = 397 Score = 38.6 bits (88), Expect = 0.60, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 7/84 (8%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 ++ + + + +L HGL+L + + + WD Q++ R Sbjct: 78 NRAKELERFRTDPECFVLLL-GKRGAHGLDLSFVTH-MFLMDQIWDRSLETQVVAR---- 131 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDE 178 + G K +V V LI ++T+++ Sbjct: 132 -ANRMGAKGSVSVVQLIMKDTMEQ 154 >gi|260944400|ref|XP_002616498.1| hypothetical protein CLUG_03739 [Clavispora lusitaniae ATCC 42720] gi|238850147|gb|EEQ39611.1| hypothetical protein CLUG_03739 [Clavispora lusitaniae ATCC 42720] Length = 448 Score = 38.2 bits (87), Expect = 0.61, Method: Composition-based stats. Identities = 14/149 (9%), Positives = 38/149 (25%), Gaps = 24/149 (16%) Query: 2 KQYHKFQR---ELYCDLQGENIEAFNSASKTVKCLQLANGAVYY--------DEEKHWKE 50 K Y K + G+ + ++ + N + Sbjct: 300 KWYQKILEKDLDAVNGANGKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLV 359 Query: 51 VHDEKIKALEVII--EKANAAPIIVAYHFNSDLARLQKAFPQGRT----------LDKDP 98 + +K+ L+ ++ + + +++ + L L+ Sbjct: 360 YNSQKMIILDKLLKKFQKEGSRVLIFSQMSRVLDILEDYCMFRSYEYCRIDGQTDHADRI 419 Query: 99 CTIQEWNEGKI-PLLFAHPASCGHGLNLQ 126 I E+N+ +I + L Sbjct: 420 QAIDEYNKPRIFKICVLVNNESWRVWVLT 448 >gi|193084204|gb|ACF09868.1| ATP-dependent RNA helicase EIF-4A family [uncultured marine group II euryarchaeote KM3-136-D10] Length = 928 Score = 38.2 bits (87), Expect = 0.62, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 10/112 (8%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T +Q + EGK +L A + GL+ +++VF+ + I+R Sbjct: 409 GMTQKAQLEGLQRFREGKCNVLVAT-SVGEEGLD-VPRADLVVFYEPVGS---EIRTIQR 463 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G T + +AG V+ LIA++T DE + ++ +++ Sbjct: 464 RGRTGRHRAG-----TVHILIARDTRDEGARASALFREKKMKQAIDRVRRNM 510 >gi|241952779|ref|XP_002419111.1| ATP-dependent helicase Rad16, putative; DNA repair protein Rad16 homologue, putative [Candida dubliniensis CD36] gi|223642451|emb|CAX42696.1| ATP-dependent helicase Rad16, putative [Candida dubliniensis CD36] Length = 1247 Score = 38.2 bits (87), Expect = 0.63, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 17/123 (13%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--------LLFAHPASCGHGLNLQYGGN 130 L + T K + +++ + L + A HGLN+ + Sbjct: 1092 EILKIRHIIYANFITPVKRAQNLYDFSNYDVDKEENQGGICLIMNIAHSSHGLNIIAATH 1151 Query: 131 ILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE-LVLQRLRTKST 189 I + Q+ IE + R + G K+ V V L + +DE +L + K Sbjct: 1152 IYFI-----NP-VKQESIEAQAIKRAHRIGQKKEVTVKTLYLKG-VDELKILSK-NEKLK 1203 Query: 190 IQD 192 Sbjct: 1204 NSK 1206 >gi|224136300|ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Populus trichocarpa] gi|222835142|gb|EEE73577.1| hypothetical protein POPTRDRAFT_781297 [Populus trichocarpa] Length = 485 Score = 38.2 bits (87), Expect = 0.64, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 33/108 (30%), Gaps = 12/108 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASK---TVKCLQLANGAVYY-------DEEKHWKEV 51 K Y R+ L + A N S ++ + + + EE Sbjct: 308 KVYTSILRKELPKLLALSSSASNHQSLQNMVIQLRKACSHPYLFPGIEPEPYEEGEHLVK 367 Query: 52 HDEKIKALEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLDKD 97 K+ L+ ++EK + +++ L LQ + + Sbjct: 368 ASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYER 415 >gi|240080725|ref|ZP_04725268.1| Yea [Neisseria gonorrhoeae FA19] gi|240112907|ref|ZP_04727397.1| Yea [Neisseria gonorrhoeae MS11] gi|58891411|gb|AAW83099.1| Yea [Neisseria gonorrhoeae] Length = 827 Score = 38.2 bits (87), Expect = 0.64, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 21/181 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA-------------RL 84 +++ E + +E K + +++ + +V + Sbjct: 632 LFHTEPQFDEEEISPKEADMLEVVKDSLAKGRKCLVYTVYTDTRDTTGRLKEIFKRHGIK 691 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 D+ +++ + ++ +P GL+L + F +++ Sbjct: 692 AAVMKATVKADQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTL 750 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G K V VY+ +T ++ L+ + K + + + Sbjct: 751 M-----QAARRSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLD 805 Query: 205 V 205 + Sbjct: 806 I 806 >gi|154174339|ref|YP_001408188.1| putative DNA methylase [Campylobacter curvus 525.92] gi|112802351|gb|EAT99695.1| putative DNA methylase [Campylobacter curvus 525.92] Length = 766 Score = 38.2 bits (87), Expect = 0.64, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 2/92 (2%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR--QAGFK 162 N G++ ++F G G+N+Q + L + W +Q R+ + Sbjct: 227 NSGEVRIVFGSTQKIGTGVNIQERVSALHNIDVPWTPAALEQRQGRVERQGNKLLDEKQN 286 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 V VY + +D + +++ K T + Sbjct: 287 FKVKVYDYATKKMLDAMNWEKIEQKRTFIAQI 318 >gi|237717755|ref|ZP_04548236.1| predicted protein [Bacteroides sp. 2_2_4] gi|229452984|gb|EEO58775.1| predicted protein [Bacteroides sp. 2_2_4] Length = 1000 Score = 38.2 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 40/112 (35%), Gaps = 6/112 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R K + E++ +L S +N+ ++++ W + Sbjct: 848 RPVFVVKGDVAFKKRQSVVTEFDSTVNGILVCTQQSLSSSVNIPTCNDVILESLQWNIPK 907 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 Q R + K V+Y+ ++++++ ++ + TK + + + Sbjct: 908 MEQFY------FRFIRLDSKEQKDVHYVTYKDSVEQNLMALVLTKERLNEFI 953 >gi|198425852|ref|XP_002130131.1| PREDICTED: similar to p68 RNA helicase isoform 1 [Ciona intestinalis] gi|198425854|ref|XP_002130146.1| PREDICTED: similar to p68 RNA helicase isoform 2 [Ciona intestinalis] Length = 585 Score = 38.2 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 47/171 (27%), Gaps = 16/171 (9%) Query: 36 ANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLA----------RLQ 85 AN + + ++ EK+ L I I+ Sbjct: 329 ANHNILQIVDVCTEDEKSEKLMRLMEEIMGEAENKTIIFTETKRKCDILTRNMRRDGWPA 388 Query: 86 KAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 ++ + + E+ GK P+L A + ++ F E++ Sbjct: 389 MCIHGDKSQPERDWVLNEFRTGKSPILVATDVASRGLD--VSDIKFVINFDFPNQCEDYI 446 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 I R Q + ++ I+ +L+ K I L+ Sbjct: 447 HRIGRTARANQTGTAYTFFTQANAKQCKDLIE--ILK--EAKQQINPRLME 493 >gi|268682142|ref|ZP_06149004.1| DEAD/DEAH box helicase [Neisseria gonorrhoeae PID332] gi|268622426|gb|EEZ54826.1| DEAD/DEAH box helicase [Neisseria gonorrhoeae PID332] Length = 772 Score = 38.2 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 21/181 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA-------------RL 84 +++ E + +E K + +++ + +V + Sbjct: 577 LFHTEPQFDEEEISPKEADMLEVVKDSLAKGRKCLVYTVYTDTRDTTGRLKEIFKRHGIK 636 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 D+ +++ + ++ +P GL+L + F +++ Sbjct: 637 AAVMKATVKADQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTL 695 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G K V VY+ +T ++ L+ + K + + + Sbjct: 696 M-----QAARRSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLD 750 Query: 205 V 205 + Sbjct: 751 I 751 >gi|260440525|ref|ZP_05794341.1| Yea [Neisseria gonorrhoeae DGI2] gi|291043828|ref|ZP_06569544.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291012291|gb|EFE04280.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 827 Score = 38.2 bits (87), Expect = 0.66, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 21/181 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA-------------RL 84 +++ E + +E K + +++ + +V + Sbjct: 632 LFHTEPQFDEEEISPKEADMLEVVKDSLAKGRKCLVYTVYTDTRDTTGRLKEIFKRHGIK 691 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 D+ +++ + ++ +P GL+L + F +++ Sbjct: 692 AAVMKATVKADQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTL 750 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G K V VY+ +T ++ L+ + K + + + Sbjct: 751 M-----QAARRSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLD 805 Query: 205 V 205 + Sbjct: 806 I 806 >gi|268598988|ref|ZP_06133155.1| DEAD/DEAH box helicase [Neisseria gonorrhoeae MS11] gi|268583119|gb|EEZ47795.1| DEAD/DEAH box helicase [Neisseria gonorrhoeae MS11] Length = 803 Score = 38.2 bits (87), Expect = 0.66, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 21/181 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA-------------RL 84 +++ E + +E K + +++ + +V + Sbjct: 608 LFHTEPQFDEEEISPKEADMLEVVKDSLAKGRKCLVYTVYTDTRDTTGRLKEIFKRHGIK 667 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 D+ +++ + ++ +P GL+L + F +++ Sbjct: 668 AAVMKATVKADQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTL 726 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G K V VY+ +T ++ L+ + K + + + Sbjct: 727 M-----QAARRSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLD 781 Query: 205 V 205 + Sbjct: 782 I 782 >gi|327400905|ref|YP_004341744.1| DEAD/DEAH box helicase domain-containing protein [Archaeoglobus veneficus SNP6] gi|327316413|gb|AEA47029.1| DEAD/DEAH box helicase domain protein [Archaeoglobus veneficus SNP6] Length = 389 Score = 38.2 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 12/120 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS----------DLARLQKAFPQGRT 93 + ++ EK L ++ K N +V + G T Sbjct: 214 NQYYYDVDDSEKFSMLVHLLRKENPKKALVFTNMRKTSDIVAKNLFMHGFKASVLHGGLT 273 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K ++ + +G+I +L A + G + + + E++ I R Sbjct: 274 QSKRDRMMERFRKGEIRVLVATDVASRGLD--VKGVTHVFNYDVPSKAEDYIHRIGRTAR 331 >gi|290559606|gb|EFD92934.1| DEAD/DEAH box helicase domain protein [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 508 Score = 38.2 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 66/213 (30%), Gaps = 31/213 (14%) Query: 10 ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA--N 67 ++ + K LQ+ E+ K + K++ L +++ Sbjct: 300 NFLVKIEKGKAKTDKELVSDPKFLQI----KEKTEDLLKKGIEHPKLEQLVQLLKNNFSE 355 Query: 68 AAPIIVAYHFNSDLA---------------RLQKAFPQGRTLDKDPCTIQEWNEGKIPLL 112 I+ + + R G + + I ++ G +L Sbjct: 356 DKKAIIFAQYRDTVDAIYSRISSMENIRPVRFIGQGKGGLSQKEQVNIISDFESGVYNVL 415 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 + G+++ G +I VF+ + Q R+G + V+ LI Sbjct: 416 V-STSVSEEGMSI-RGVDIAVFYETIPSAIRNIQRRGRVGRFAAGK--------VFILIT 465 Query: 173 QNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 + T DE + + ++ +++ ++ Sbjct: 466 KGTNDESYYWLSKRREKSMKKIIKNIQENPENI 498 >gi|268686611|ref|ZP_06153473.1| DEAD/DEAH box helicase [Neisseria gonorrhoeae SK-93-1035] gi|268626895|gb|EEZ59295.1| DEAD/DEAH box helicase [Neisseria gonorrhoeae SK-93-1035] Length = 763 Score = 38.2 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 21/181 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA-------------RL 84 +++ E + +E K + +++ + +V + Sbjct: 568 LFHTEPQFDEEEISPKEADMLEVVKDSLAKGRKCLVYTVYTDTRDTTGRLKEIFKRHGIK 627 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 D+ +++ + ++ +P GL+L + F +++ Sbjct: 628 AAVMKATVKADQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTL 686 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G K V VY+ +T ++ L+ + K + + + Sbjct: 687 M-----QAARRSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLD 741 Query: 205 V 205 + Sbjct: 742 I 742 >gi|227486086|ref|ZP_03916402.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] gi|227235933|gb|EEI85948.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] Length = 252 Score = 38.2 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 4/63 (6%) Query: 135 FSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL 194 + W + Q RI Q + V ++ + +NT D + Q L K + Sbjct: 17 LDIPWRPADLSQRAGRIVR----QGNENKEVHIFRYVTENTFDAYLFQTLENKQKYISQI 72 Query: 195 LNA 197 + + Sbjct: 73 MTS 75 >gi|117926698|ref|YP_867315.1| DEAD/DEAH box helicase [Magnetococcus sp. MC-1] gi|117610454|gb|ABK45909.1| DEAD/DEAH box helicase domain protein [Magnetococcus sp. MC-1] Length = 572 Score = 38.2 bits (87), Expect = 0.67, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 2/61 (3%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K ++ + +G+ P+L A + G ++ + L + E++ I R Sbjct: 355 PQMKRLKVLKRFQDGEYPVLIATDVAGRGLHI--DGVTHVINYDLPDNAEDYVHRIGRTA 412 Query: 153 V 153 Sbjct: 413 R 413 >gi|240128214|ref|ZP_04740875.1| Yea [Neisseria gonorrhoeae SK-93-1035] Length = 827 Score = 38.2 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 21/181 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA-------------RL 84 +++ E + +E K + +++ + +V + Sbjct: 632 LFHTEPQFDEEEISPKEADMLEVVKDSLAKGRKCLVYTVYTDTRDTTGRLKEIFKRHGIK 691 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 D+ +++ + ++ +P GL+L + F +++ Sbjct: 692 AAVMKATVKADQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTL 750 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G K V VY+ +T ++ L+ + K + + + Sbjct: 751 M-----QAARRSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLD 805 Query: 205 V 205 + Sbjct: 806 I 806 >gi|55824588|gb|AAV66414.1| chromodomain helicase DNA-binding protein 4 [Macaca fascicularis] Length = 467 Score = 38.2 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 6/31 (19%), Positives = 17/31 (54%) Query: 165 VFVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 V +Y + + +++E + Q + K + L++ Sbjct: 1 VMIYRFVTRASVEERITQVAKKKMMLTHLVV 31 >gi|170731293|ref|YP_001776726.1| ATP-dependent RNA helicase RhlB [Xylella fastidiosa M12] gi|167966086|gb|ACA13096.1| ATP-dependent RNA helicase [Xylella fastidiosa M12] Length = 544 Score = 38.2 bits (87), Expect = 0.69, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 13/141 (9%) Query: 54 EKIKALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQ-------GRTLDKDPCTIQE 103 EKI L ++ ++ IV + F +AR K + Sbjct: 244 EKIPLLLGLLSRSEGMRTIVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNR 303 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +G++ +L A + G N + + L +D E++ I R Sbjct: 304 FQKGQLEILVATDVAARGLHI--DGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISF 361 Query: 164 AVFVYYLIAQNTIDELVLQRL 184 A Y + + I+ + Q++ Sbjct: 362 ACERYAMSLPD-IEAYIEQKI 381 >gi|91791900|ref|YP_561551.1| ATP-dependent helicase HepA [Shewanella denitrificans OS217] gi|122968987|sp|Q12RU8|RAPA_SHEDO RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|91713902|gb|ABE53828.1| SNF2-related [Shewanella denitrificans OS217] Length = 968 Score = 38.2 bits (87), Expect = 0.70, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 6/133 (4%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + + K + +I +A A + + +++D E Sbjct: 498 FLKSHRSKKVLIIASQAETALSLEEALRTREGILATVFHEGMSIIERDKAGAYFAQEDAG 557 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 G N Q+ + LV F L + + +Q I R+ + G K + ++ Sbjct: 558 AQALICSEIGSEGRNFQF-ASHLVLFDLPLNPDLLEQRIGRLD-----RIGQKNDIQIHL 611 Query: 170 LIAQNTIDELVLQ 182 + T E ++Q Sbjct: 612 PYLEGTAQERLMQ 624 >gi|167521073|ref|XP_001744875.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776489|gb|EDQ90108.1| predicted protein [Monosiga brevicollis MX1] Length = 616 Score = 38.2 bits (87), Expect = 0.71, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 6/70 (8%) Query: 102 QEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGF 161 + +P L + GL L N ++ +E + R + G Sbjct: 545 EFKTAEDMPFLLLSTKANNAGLTLT-VANHIIMLDAILSPG-----VEAQLINRVHRIGQ 598 Query: 162 KRAVFVYYLI 171 R V ++ + Sbjct: 599 SRPVTIHKYV 608 >gi|82539300|ref|XP_724048.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23478561|gb|EAA15613.1| SNF2 family N-terminal domain, putative [Plasmodium yoelii yoelii] Length = 986 Score = 38.2 bits (87), Expect = 0.71, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 2/79 (2%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEW-NEGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + + I+E+ + + + G GLNL N ++ Sbjct: 900 KRFQNNVYVRLDGSTNTIERQQIIKEFSENDNVFIFLLSTKAGGVGLNL-IAANHVILMD 958 Query: 137 LWWDLEEHQQMIERIGVTR 155 W+ +Q +R+ Sbjct: 959 QDWNPHNDRQAEDRVHRLG 977 >gi|268603668|ref|ZP_06137835.1| DEAD/DEAH box helicase [Neisseria gonorrhoeae PID1] gi|268587799|gb|EEZ52475.1| DEAD/DEAH box helicase [Neisseria gonorrhoeae PID1] Length = 772 Score = 38.2 bits (87), Expect = 0.72, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 21/181 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA-------------RL 84 +++ E + +E K + +++ + +V + Sbjct: 577 LFHTEPQFDEEEISPKEADMLEVVKDSLAKGRKCLVYTVYTDTRDTTGRLKEIFKRHGIK 636 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 D+ +++ + ++ +P GL+L + F +++ Sbjct: 637 AAVMKATVKADQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTL 695 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G K V VY+ +T ++ L+ + K + + + Sbjct: 696 M-----QAARRSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLD 750 Query: 205 V 205 + Sbjct: 751 I 751 >gi|222622030|gb|EEE56162.1| hypothetical protein OsJ_05065 [Oryza sativa Japonica Group] Length = 2645 Score = 38.2 bits (87), Expect = 0.72, Method: Composition-based stats. Identities = 21/207 (10%), Positives = 56/207 (27%), Gaps = 46/207 (22%) Query: 18 ENIEAFNSASK---TVKCLQLANGAVYYDEEKHWKEVH--------------DEKIKALE 60 +E + + + + + +E + K+ L+ Sbjct: 773 SEMETDSVGALHDIYLSLKKCCDHPYIVNEFLRSSLSNNSNVTENIDTVVHASGKLLVLD 832 Query: 61 VIIEKANAAPIIVAYHFNSD---------LARLQKAFPQGRTLDKD----------PCTI 101 ++ + + V F SD + G + I Sbjct: 833 KMLNEIKKKSLRVILLFQSDRAGGNKMGNILEDLMHHRFGPESYERVEYRAVLSRKQAAI 892 Query: 102 QEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++N + +C + L + ++ + + + +++I + Sbjct: 893 DKFNNKTNGRFVFLIENRACLPSIKLSSI-DAIIIYGSDNNPLNDLKALQKIKIE----- 946 Query: 160 GFKRAVFVYYLIAQNTIDEL--VLQRL 184 V ++ L T++E VL R Sbjct: 947 SQFERVSIFRLYTPFTVEEKSLVLARQ 973 >gi|6707723|sp|O91729|NTP1_CFEPV RecName: Full=Nucleoside triphosphatase I; AltName: Full=Nucleoside triphosphate phosphohydrolase I; Short=NPH I gi|3721992|gb|AAC63435.1| nucleotide triphosphate phosphohydrolase I [Choristoneura fumiferana entomopoxvirus 'L'] Length = 647 Score = 38.2 bits (87), Expect = 0.72, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 130 NILVFFSLWWDLEEHQQMIERIGVTRQRQA--GFKRAVFVYYLIA----QNTIDELVLQR 183 N ++ + W+ E +Q+I R + R V V+++I+ + ++D+ +L Sbjct: 466 NDIIILDMPWNESELKQIIGRSIRLNSHEYLPINYRYVNVHFIISYSNNRKSVDKEILDI 525 Query: 184 LRTKSTIQDLLLNALKKETIHV 205 ++ K +++ + LK I + Sbjct: 526 IKNKQGKINVVFDLLKASPIEI 547 >gi|240123514|ref|ZP_04736470.1| Yea [Neisseria gonorrhoeae PID332] Length = 827 Score = 38.2 bits (87), Expect = 0.73, Method: Composition-based stats. Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 21/181 (11%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKA--NAAPIIVAYHFNSDLA-------------RL 84 +++ E + +E K + +++ + +V + Sbjct: 632 LFHTEPQFDEEEISPKEADMLEVVKDSLAKGRKCLVYTVYTDTRDTTGRLKEIFKRHGIK 691 Query: 85 QKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEH 144 D+ +++ + ++ +P GL+L + F +++ Sbjct: 692 AAVMKATVKADQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTL 750 Query: 145 QQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIH 204 R + G K V VY+ +T ++ L+ + K + + + Sbjct: 751 M-----QAARRSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLD 805 Query: 205 V 205 + Sbjct: 806 I 806 >gi|312377808|gb|EFR24548.1| hypothetical protein AND_10783 [Anopheles darlingi] Length = 1101 Score = 38.2 bits (87), Expect = 0.73, Method: Composition-based stats. Identities = 4/44 (9%), Positives = 14/44 (31%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH 52 + ++ Q ++ F ++ Q+ + E + Sbjct: 895 KRMHNKGQEAEVQQFQILVLLLRLRQICCHPGLIHKMLSDDEGN 938 >gi|330966945|gb|EGH67205.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 378 Score = 38.2 bits (87), Expect = 0.74, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L + F +++ Q R Sbjct: 256 RREDWILDQVDRGVDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 309 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 310 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 367 >gi|262194053|ref|YP_003265262.1| helicase [Haliangium ochraceum DSM 14365] gi|262077400|gb|ACY13369.1| helicase domain protein [Haliangium ochraceum DSM 14365] Length = 1094 Score = 38.2 bits (87), Expect = 0.75, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 6/97 (6%) Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + E L+ + GL+L + L+ L ++ +Q RI Sbjct: 570 RTLAVRRFQEED-NLILVSTDATAEGLDLHLRCHHLLHLELPYNPNRLEQRNGRID---- 624 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G + A V YL T +E +L RL K Q Sbjct: 625 -RFGQRFAPQVRYLYLAGTFEERLLLRLVAKYERQRA 660 >gi|54112418|ref|NP_849243.2| Fanconi anemia group M protein homolog [Mus musculus] gi|78099255|sp|Q8BGE5|FANCM_MOUSE RecName: Full=Fanconi anemia group M protein homolog; Short=Protein FACM; AltName: Full=ATP-dependent RNA helicase FANCM Length = 2021 Score = 38.2 bits (87), Expect = 0.75, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 53/164 (32%), Gaps = 18/164 (10%) Query: 44 EEKHWKEVHDEKIKALEVI-IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 + + ++E I P+I F +G T + ++ Sbjct: 459 CHESRVMIFSSFRDSVEEIAEMLLQHRPVIRVMTFV---GHASGKNTKGFTQKEQLQVVR 515 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ +G L GL++ ++++ F Q + R G RQ + Sbjct: 516 QFRDGGYNTLV-STCVGEEGLDI-GEVDLIICFDAQKSPIRLIQRMGRTGRKRQGR---- 569 Query: 163 RAVFVYYLIAQNTIDELVL-QRLRTKSTIQDLLLNALKKETIHV 205 + ++A+ +E Q K I + + ++ + + Sbjct: 570 ----IVVILAEG-REERTYNQSQSNKKNIYKAI--SGNRQVLRL 606 >gi|77361539|ref|YP_341114.1| ATP-dependent helicase HepA [Pseudoalteromonas haloplanktis TAC125] gi|76876450|emb|CAI87672.1| RNA polymerase associated protein (ATP-dependent helicase HepA) [Pseudoalteromonas haloplanktis TAC125] Length = 964 Score = 38.2 bits (87), Expect = 0.75, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 9/97 (9%) Query: 88 FPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + + +L G N Q+ + LV F L + + + Sbjct: 530 FHEGMSIIERDRAAAFFADEYDNAQILLCS-EIGSEGRNFQF-SHHLVLFDLPLNPDLLE 587 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 Q I R+ + G + V ++ +NT E++L+ Sbjct: 588 QRIGRLD-----RIGQTQDVNIHVPYFENTAQEVLLR 619 >gi|325924306|ref|ZP_08185850.1| DNA/RNA helicase, superfamily II [Xanthomonas gardneri ATCC 19865] gi|325545171|gb|EGD16481.1| DNA/RNA helicase, superfamily II [Xanthomonas gardneri ATCC 19865] Length = 523 Score = 38.2 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 61/192 (31%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E I A + Q + + +EK L + Sbjct: 155 AYEHMNEPEKLVVETETITAA-------RVRQ-----------RIYFPSDEEKQTLLLGL 196 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + + + R+ + + K + + +G++ +L Sbjct: 197 LSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 256 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 257 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSL 314 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 315 PD-IEAYIAQKI 325 >gi|171316721|ref|ZP_02905934.1| helicase domain protein [Burkholderia ambifaria MEX-5] gi|171098172|gb|EDT42983.1| helicase domain protein [Burkholderia ambifaria MEX-5] Length = 725 Score = 38.2 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 7/110 (6%) Query: 88 FPQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 F G + K + G L + S G NL + ++F+ W Sbjct: 578 FHGGIPIAKRVKVKDQRFLTGLATGLLSTKESGRAGYNLPN-ADYVLFYDRSWTWRAEY- 635 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 + R + K + V Y +ID Q + K L+ Sbjct: 636 ----QAMRRALRWNRKGRLSVEYFHLPGSIDVYQDQMVAHKRDAMQAGLD 681 >gi|11499927|ref|NP_071172.1| ATP-dependent RNA helicase HepA, putative [Archaeoglobus fulgidus DSM 4304] gi|2650747|gb|AAB91314.1| ATP-dependent RNA helicase HepA, putative [Archaeoglobus fulgidus DSM 4304] Length = 943 Score = 38.2 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 60/173 (34%), Gaps = 21/173 (12%) Query: 31 KCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQ 90 + +Q+ N E+ + + + + L+ + F Sbjct: 386 RLVQVVNEH---MEKGNKVIIFTQFLATLDHLER-----------TFKEIYGENSVVTVH 431 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G ++ +L A + G LNLQ N+++ + + W+ + Q + R Sbjct: 432 GGLTHEEKKNRIAKLWDSAKILIAT-DAAGESLNLQA-ANVVIHYEIPWNPVVYIQRVGR 489 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETI 203 + + G ++ +++ ++ I+ VL+ + K + + E I Sbjct: 490 V-----YRYGQEKDIYIQSMLPVFKIERRVLEVILQKVETIEKDFDIGSVEII 537 >gi|301769905|ref|XP_002920371.1| PREDICTED: putative DNA repair and recombination protein RAD26-like, partial [Ailuropoda melanoleuca] Length = 802 Score = 38.2 bits (87), Expect = 0.77, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 17/123 (13%) Query: 28 KTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA 87 K QL N + K K+ + A + Sbjct: 696 KMKVLQQLLNHCRKNKD-KILLFSFSTKLLDVLQQYCMAAG--------------LDYRR 740 Query: 88 FPQGRTLDKDPCTIQEWNEGK-IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 ++ ++E+N + + + + G GLN G N++V F W+ Q Sbjct: 741 LDGSTKSEERIKIVKEFNSTQDVNICLVSTMAGGLGLNF-VGANVVVLFDPTWNPANDLQ 799 Query: 147 MIE 149 I+ Sbjct: 800 AID 802 >gi|254674197|emb|CBA09981.1| hypothetical protein, (pXO1-08) [Neisseria meningitidis alpha275] Length = 827 Score = 38.2 bits (87), Expect = 0.77, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 39/111 (35%), Gaps = 6/111 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ +++ + ++ +P GL+L + F +++ Sbjct: 702 DQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTLM-----QAAR 755 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R + G K V VY+ +T ++ L+ + K + + + + Sbjct: 756 RSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLDI 806 >gi|187957728|gb|AAI50786.1| Fanconi anemia, complementation group M [Mus musculus] Length = 2021 Score = 38.2 bits (87), Expect = 0.77, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 53/164 (32%), Gaps = 18/164 (10%) Query: 44 EEKHWKEVHDEKIKALEVI-IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 + + ++E I P+I F +G T + ++ Sbjct: 459 CHESRVMIFSSFRDSVEEIAEMLLQHRPVIRVMTFV---GHASGKNTKGFTQKEQLQVVR 515 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ +G L GL++ ++++ F Q + R G RQ + Sbjct: 516 QFRDGGYNTLV-STCVGEEGLDI-GEVDLIICFDAQKSPIRLIQRMGRTGRKRQGR---- 569 Query: 163 RAVFVYYLIAQNTIDELVL-QRLRTKSTIQDLLLNALKKETIHV 205 + ++A+ +E Q K I + + ++ + + Sbjct: 570 ----IVVILAEG-REERTYNQSQSNKKNIYKAI--SGNRQVLRL 606 >gi|240117956|ref|ZP_04732018.1| Yea [Neisseria gonorrhoeae PID1] Length = 827 Score = 38.2 bits (87), Expect = 0.78, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 39/111 (35%), Gaps = 6/111 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ +++ + ++ +P GL+L + F +++ Sbjct: 702 DQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTLM-----QAAR 755 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R + G K V VY+ +T ++ L+ + K + + + + Sbjct: 756 RSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLDI 806 >gi|332036098|gb|EGI72574.1| RNA polymerase associated protein RapA [Pseudoalteromonas haloplanktis ANT/505] Length = 964 Score = 37.8 bits (86), Expect = 0.81, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 9/97 (9%) Query: 88 FPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + + +L G N Q+ + LV F L + + + Sbjct: 530 FHEGMSIIERDRAAAFFADEYDNAQILLCS-EIGSEGRNFQF-SHHLVLFDLPLNPDLLE 587 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 Q I R+ + G + V ++ +NT E++L+ Sbjct: 588 QRIGRLD-----RIGQTQDVNIHVPYFENTAQEVLLR 619 >gi|310831272|ref|YP_003969915.1| putative superfamily II helicase/VV D11-like transcription factor [Cafeteria roenbergensis virus BV-PW1] gi|309386456|gb|ADO67316.1| putative superfamily II helicase/VV D11-like transcription factor [Cafeteria roenbergensis virus BV-PW1] Length = 777 Score = 37.8 bits (86), Expect = 0.81, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 84 LQKAFPQGRTLDKDPCTIQEWNEG------KIPLLFAHPASCGHGLNLQYGGNILVFFSL 137 + G + + +N+ KI ++ PA G+NL + Sbjct: 515 RYMEYHGGIDAEIREKYKKIFNDPSNKYAEKIKIILISPA-GSEGINL-KNTRQVHLMEP 572 Query: 138 WWDLEEHQQMIERIGVTRQR----QAGFKRAVFVYYLIAQN---TIDELVLQRLRTKSTI 190 +W+ +Q+I R K V+ Y +I +N T D+ + R K+ + Sbjct: 573 YWNEVRIEQIIGRAIRQCSHADLPMNERKVDVYRYKMIRKNGKQTTDQEMESISRKKNNL 632 Query: 191 QDLLLNALKK 200 L A+++ Sbjct: 633 IQSFLEAVRE 642 >gi|212633452|ref|YP_002309977.1| ATP-dependent helicase HepA [Shewanella piezotolerans WP3] gi|254789696|sp|B8CIB4|RAPA_SHEPW RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|212554936|gb|ACJ27390.1| SNF2-like:Helicase [Shewanella piezotolerans WP3] Length = 968 Score = 37.8 bits (86), Expect = 0.82, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 6/133 (4%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + + K + +I +A A + + + +++D E Sbjct: 498 FLKTNRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMSIIERDKAGAYFAQETGG 557 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 G N Q+ + LV F L + + +Q I R+ + G K V ++ Sbjct: 558 AQALICSEIGSEGRNFQF-ASHLVLFDLPLNPDLLEQRIGRLD-----RIGQKNDVEIHL 611 Query: 170 LIAQNTIDELVLQ 182 T E ++Q Sbjct: 612 PYLAGTAQERLMQ 624 >gi|59710877|ref|YP_203653.1| ATP-dependent helicase HepA [Vibrio fischeri ES114] gi|75354721|sp|Q5E881|RAPA_VIBF1 RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|59478978|gb|AAW84765.1| RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor) [Vibrio fischeri ES114] Length = 952 Score = 37.8 bits (86), Expect = 0.82, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 20/137 (14%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYH-----------FNSDLARLQKAFPQGRTLDKDPCT 100 D ++ L ++++ +++ F +G ++ + Sbjct: 489 FDPRVNWLLELLKENRNEKVLIIASRASTALQLEQALREREGIRGTVFHEGMSIIERDKA 548 Query: 101 IQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + EG +L G N Q+ N LV F L ++ + +Q I R+ + Sbjct: 549 AAYFAQEEGGAQVLICS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLEQRIGRLD-----R 601 Query: 159 AGFKRAVFVYYLIAQNT 175 G KR + ++ Q T Sbjct: 602 IGQKRDIEIHVPYLQGT 618 >gi|254788394|ref|YP_003075823.1| ATP-dependent helicase HepA [Teredinibacter turnerae T7901] gi|237685662|gb|ACR12926.1| RNA polymerase-associated protein RapA [Teredinibacter turnerae T7901] Length = 879 Score = 37.8 bits (86), Expect = 0.83, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 34/114 (29%), Gaps = 6/114 (5%) Query: 62 IIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGH 121 I + Y + + +++D + L Sbjct: 422 ICRQLAQVKDCENYLWQKHGIDAALFHEEQNLIERDKAAAYFADSEHGSQLLVCSEIGSE 481 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 G N Q+ +++ L + +Q I R+ + G R V V+ A ++ Sbjct: 482 GRNFQFSCHLVC-LDLPEHPDLLEQRIGRLD-----RIGQTRDVHVHVPFAAHS 529 >gi|254525036|ref|ZP_05137091.1| putative ATP-dependent RNA helicase [Stenotrophomonas sp. SKA14] gi|219722627|gb|EED41152.1| putative ATP-dependent RNA helicase [Stenotrophomonas sp. SKA14] Length = 565 Score = 37.8 bits (86), Expect = 0.83, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E I A + Q + + DEKI L + Sbjct: 202 AYEHMNEPQKLVVEAETITAA-------RVRQ-----------RIYFPADDEKIPLLLGL 243 Query: 63 IEKANAAPIIVAYH---FNSDLARLQKAFPQ-------GRTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + F +AR + K + + +G++ +L Sbjct: 244 LSRSEGARTMVFVNTKVFVERVARSLEKAGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 303 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 304 VATDVAARGLHI--DGIKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMGL 361 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 362 PD-IEAYIEQKI 372 >gi|194367446|ref|YP_002030056.1| ATP-dependent RNA helicase RhlB [Stenotrophomonas maltophilia R551-3] gi|194350250|gb|ACF53373.1| DEAD/DEAH box helicase domain protein [Stenotrophomonas maltophilia R551-3] Length = 574 Score = 37.8 bits (86), Expect = 0.83, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E I A + Q + + DEKI L + Sbjct: 210 AYEHMNEPQKLVVEAETITAA-------RVRQ-----------RIYFPADDEKIPLLLGL 251 Query: 63 IEKANAAPIIVAYH---FNSDLARLQKAFPQ-------GRTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + F +AR + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKVFVERVARSLEKAGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGIKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMGL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|190576089|ref|YP_001973934.1| ATP-dependent RNA helicase RhlB [Stenotrophomonas maltophilia K279a] gi|190014011|emb|CAQ47651.1| putative ATP-dependent RNA helicase [Stenotrophomonas maltophilia K279a] Length = 574 Score = 37.8 bits (86), Expect = 0.83, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E I A + Q + + DEKI L + Sbjct: 210 AYEHMNEPQKLVVEAETITAA-------RVRQ-----------RIYFPADDEKIPLLLGL 251 Query: 63 IEKANAAPIIVAYH---FNSDLARLQKAFPQ-------GRTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + F +AR + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKVFVERVARSLEKAGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGIKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMGL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|182682666|ref|YP_001830826.1| ATP-dependent RNA helicase RhlB [Xylella fastidiosa M23] gi|182632776|gb|ACB93552.1| DEAD/DEAH box helicase domain protein [Xylella fastidiosa M23] gi|307578947|gb|ADN62916.1| ATP-dependent RNA helicase RhlB [Xylella fastidiosa subsp. fastidiosa GB514] Length = 544 Score = 37.8 bits (86), Expect = 0.84, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 13/141 (9%) Query: 54 EKIKALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQ-------GRTLDKDPCTIQE 103 EKI L ++ + +V + F +AR K + Sbjct: 244 EKIPLLLGLLSRNEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNR 303 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +G++ +L A + G N + + L +D E++ I R Sbjct: 304 FQKGQLEILVATDVAARGLHI--DGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISF 361 Query: 164 AVFVYYLIAQNTIDELVLQRL 184 A Y + + I+ + Q++ Sbjct: 362 ACERYAMSLPD-IEAYIEQKI 381 >gi|28199914|ref|NP_780228.1| ATP-dependent RNA helicase RhlB [Xylella fastidiosa Temecula1] gi|32363278|sp|Q879Y6|RHLB_XYLFT RecName: Full=ATP-dependent RNA helicase rhlB gi|28058045|gb|AAO29877.1| ATP-dependent RNA helicase [Xylella fastidiosa Temecula1] Length = 543 Score = 37.8 bits (86), Expect = 0.84, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 13/141 (9%) Query: 54 EKIKALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQ-------GRTLDKDPCTIQE 103 EKI L ++ + +V + F +AR K + Sbjct: 243 EKIPLLLGLLSRNEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNR 302 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +G++ +L A + G N + + L +D E++ I R Sbjct: 303 FQKGQLEILVATDVAARGLHI--DGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISF 360 Query: 164 AVFVYYLIAQNTIDELVLQRL 184 A Y + + I+ + Q++ Sbjct: 361 ACERYAMSLPD-IEAYIEQKI 380 >gi|330891815|gb|EGH24476.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. mori str. 301020] Length = 178 Score = 37.8 bits (86), Expect = 0.85, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L + F +++ Q R Sbjct: 56 RREDWILDQVDRGVDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 109 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 110 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 167 >gi|330878697|gb|EGH12846.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 217 Score = 37.8 bits (86), Expect = 0.85, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + I +L +P GL+L + F +++ Q R Sbjct: 95 RREDWILDQVDRGIDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 148 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 149 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 206 >gi|321464203|gb|EFX75212.1| hypothetical protein DAPPUDRAFT_323398 [Daphnia pulex] Length = 238 Score = 37.8 bits (86), Expect = 0.85, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 15/30 (50%) Query: 166 FVYYLIAQNTIDELVLQRLRTKSTIQDLLL 195 +I Q T++ +L+ + K + + LL Sbjct: 170 TFIQMITQGTVEVRILRLQQEKLAMANGLL 199 >gi|160877020|ref|YP_001556336.1| ATP-dependent helicase HepA [Shewanella baltica OS195] gi|217974883|ref|YP_002359634.1| ATP-dependent helicase HepA [Shewanella baltica OS223] gi|189029430|sp|A9L3Y2|RAPA_SHEB9 RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|254789695|sp|B8ECC6|RAPA_SHEB2 RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|160862542|gb|ABX51076.1| SNF2-related protein [Shewanella baltica OS195] gi|217500018|gb|ACK48211.1| SNF2-related protein [Shewanella baltica OS223] gi|315269223|gb|ADT96076.1| SNF2-related protein [Shewanella baltica OS678] Length = 968 Score = 37.8 bits (86), Expect = 0.85, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 6/134 (4%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + + + K + +I +A A + + + +++D E Sbjct: 497 EFLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMSIIERDKAGAYFAQEEG 556 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 G N Q+ + LV F L + + +Q I R+ + G K + ++ Sbjct: 557 GAQALICSEIGSEGRNFQF-ASHLVLFDLPLNPDLLEQRIGRLD-----RIGQKNDIQIH 610 Query: 169 YLIAQNTIDELVLQ 182 ++T E ++Q Sbjct: 611 LPYLEDTAQERLMQ 624 >gi|15898471|ref|NP_343076.1| hypothetical protein SSO1653 [Sulfolobus solfataricus P2] gi|13814900|gb|AAK41866.1| Helicase of the snf2/rad54 family (amino end fragment), hypothetical [Sulfolobus solfataricus P2] Length = 802 Score = 37.8 bits (86), Expect = 0.85, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 22/88 (25%), Gaps = 5/88 (5%) Query: 3 QYHKFQRELYCDLQG--ENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 Y L+ ++ S +K Q+ + K+ Sbjct: 679 MYKAEVENLFNNIDSVTGIKRKGMILSTLLKLKQIVDHPALLK-GGEQSVRRSGKMIRTM 737 Query: 61 VIIEK--ANAAPIIVAYHFNSDLARLQK 86 IIE+ I + F ++ Sbjct: 738 EIIEEALDEGDKIAIFTQFVDMGKIIRN 765 >gi|304410892|ref|ZP_07392509.1| SNF2-related protein [Shewanella baltica OS183] gi|307304937|ref|ZP_07584687.1| SNF2-related protein [Shewanella baltica BA175] gi|304350789|gb|EFM15190.1| SNF2-related protein [Shewanella baltica OS183] gi|306912339|gb|EFN42763.1| SNF2-related protein [Shewanella baltica BA175] Length = 968 Score = 37.8 bits (86), Expect = 0.86, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 6/134 (4%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + + + K + +I +A A + + + +++D E Sbjct: 497 EFLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMSIIERDKAGAYFAQEEG 556 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 G N Q+ + LV F L + + +Q I R+ + G K + ++ Sbjct: 557 GAQALICSEIGSEGRNFQF-ASHLVLFDLPLNPDLLEQRIGRLD-----RIGQKNDIQIH 610 Query: 169 YLIAQNTIDELVLQ 182 ++T E ++Q Sbjct: 611 LPYLEDTAQERLMQ 624 >gi|126172784|ref|YP_001048933.1| ATP-dependent helicase HepA [Shewanella baltica OS155] gi|189029428|sp|A3D001|RAPA_SHEB5 RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|125995989|gb|ABN60064.1| SNF2-related protein [Shewanella baltica OS155] Length = 968 Score = 37.8 bits (86), Expect = 0.86, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 6/134 (4%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + + + K + +I +A A + + + +++D E Sbjct: 497 EFLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMSIIERDKAGAYFAQEEG 556 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 G N Q+ + LV F L + + +Q I R+ + G K + ++ Sbjct: 557 GAQALICSEIGSEGRNFQF-ASHLVLFDLPLNPDLLEQRIGRLD-----RIGQKNDIQIH 610 Query: 169 YLIAQNTIDELVLQ 182 ++T E ++Q Sbjct: 611 LPYLEDTAQERLMQ 624 >gi|240115662|ref|ZP_04729724.1| Yea [Neisseria gonorrhoeae PID18] gi|268601341|ref|ZP_06135508.1| DEAD/DEAH box helicase [Neisseria gonorrhoeae PID18] gi|268585472|gb|EEZ50148.1| DEAD/DEAH box helicase [Neisseria gonorrhoeae PID18] Length = 548 Score = 37.8 bits (86), Expect = 0.87, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 39/111 (35%), Gaps = 6/111 (5%) Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 D+ +++ + ++ +P GL+L + F +++ Sbjct: 423 DQREDWVEDQLASGVQVVICNPELVKTGLDLLAF-PTIYFLQTGYNVYTLM-----QAAR 476 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 R + G K V VY+ +T ++ L+ + K + + + + Sbjct: 477 RSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGDMPDSGLDI 527 >gi|71997889|ref|NP_498690.2| hypothetical protein ZK686.2 [Caenorhabditis elegans] gi|37999937|sp|P34668|YO12_CAEEL RecName: Full=Putative ATP-dependent RNA helicase ZK686.2 gi|31746612|gb|AAP68928.1| Hypothetical protein ZK686.2 [Caenorhabditis elegans] Length = 593 Score = 37.8 bits (86), Expect = 0.87, Method: Composition-based stats. Identities = 18/177 (10%), Positives = 57/177 (32%), Gaps = 24/177 (13%) Query: 41 YYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP-C 99 + ++++ K + + + +++ + + + + + K Sbjct: 381 KFHPLAVYQQITRNKFNRTLIFVNEVSSSNRLAHVLKELCKDQFEVDYFTAQLFGKRRYK 440 Query: 100 TIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQA 159 ++++N+ + +L G +L ++ + + + + R R +A Sbjct: 441 MLEKFNKNENRVLICSDVLAR-GTDLNKVDCVINY----NLPADDKLFVHR--AGRTGRA 493 Query: 160 GFKRAVFVY------YLIAQ---------NTIDELVLQRLRTK-STIQDLLLNALKK 200 G V L + +T++E + + + K L +LK Sbjct: 494 GQDGYVISVGDKESKRLFVKMLKVTNLWGDTVEEQMEEYIFEKDMDRYSKALESLKA 550 >gi|238918645|ref|YP_002932159.1| ATP-dependent helicase HepA [Edwardsiella ictaluri 93-146] gi|238868213|gb|ACR67924.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 950 Score = 37.8 bits (86), Expect = 0.91, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 9/90 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F QG +L + + E +L G N Q+ N LV F L ++ + + Sbjct: 516 FHQGMSLIERDRAAAYFASQEEGAQVLLCS-EIGSEGRNFQF-ANHLVMFDLPFNPDLLE 573 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 Q I R+ + G R + +Y + T Sbjct: 574 QRIGRLD-----RIGQARDIQIYVPCLEGT 598 >gi|330989611|gb|EGH87714.1| SNF2-related:helicase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 604 Score = 37.8 bits (86), Expect = 0.92, Method: Composition-based stats. Identities = 17/152 (11%), Positives = 41/152 (26%), Gaps = 7/152 (4%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKA 66 + + + ++ QL + + ++ E +VI+ Sbjct: 455 LSQAERDEYNQIMRSDTHRFARLGALRQL----LERVKVLIVADLMAELDVDDKVILFCE 510 Query: 67 NAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNL 125 ++ + + + K I + + ++ G G NL Sbjct: 511 YQESVVTLREYCLKMGIGCVTLVGSDSPKKRQKAIDAFQQDQDCRVFIGTRSAAGTGYNL 570 Query: 126 QYGGNILVFFSLWWDLEEHQQMI-ERIGVTRQ 156 N + F L W ++ RI + Sbjct: 571 TA-ANYVFFPGLPWTPGLRTKLKTGRIAMGNC 601 >gi|326428746|gb|EGD74316.1| hypothetical protein PTSG_12430 [Salpingoeca sp. ATCC 50818] Length = 1116 Score = 37.8 bits (86), Expect = 0.92, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 7/77 (9%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + L H L + + W R V+ + A Sbjct: 998 FTQDPRFFCLLLST---AHLPRLPAFVPVCAVIEVDW----ISDHRHRSRVSDRFGAKRT 1050 Query: 163 RAVFVYYLIAQNTIDEL 179 V +Y L ++TI+E Sbjct: 1051 PPVTLYRLYTKDTIEER 1067 >gi|156358317|ref|XP_001624467.1| predicted protein [Nematostella vectensis] gi|156211250|gb|EDO32367.1| predicted protein [Nematostella vectensis] Length = 642 Score = 37.8 bits (86), Expect = 0.92, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 12/106 (11%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G + + + + G L GL++ I+ F Q + R Sbjct: 510 GLSQKEQLEVVHRFRMGGYNTLV-STCVGEEGLDIGDVDLIVC-FDAHASPIRLVQRMGR 567 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR-LRTKSTIQDLLL 195 G R + + L+A+ +E V +R K +I ++ Sbjct: 568 TGRKRDGR--------IVVLVAEGK-EEQVYKRSQSNKKSIHKAIV 604 >gi|77166040|ref|YP_344565.1| DEAD/DEAH box helicase-like [Nitrosococcus oceani ATCC 19707] gi|254436366|ref|ZP_05049872.1| DEAD/DEAH box helicase domain protein [Nitrosococcus oceani AFC27] gi|76884354|gb|ABA59035.1| DEAD/DEAH box helicase-like protein [Nitrosococcus oceani ATCC 19707] gi|207088056|gb|EDZ65329.1| DEAD/DEAH box helicase domain protein [Nitrosococcus oceani AFC27] Length = 431 Score = 37.8 bits (86), Expect = 0.92, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 25/88 (28%), Gaps = 3/88 (3%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K + + + P+L A + + + L D E++ I R Sbjct: 289 PQGKRQRLLAAFQDRIYPILVATDVAARGLHI--STVTHVFNYDLPQDPEDYVHRIGRTA 346 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELV 180 A Y + I+E + Sbjct: 347 RAGASGLAVSFACEDYAFSLPD-IEEYI 373 >gi|297278613|ref|XP_002801591.1| PREDICTED: DNA repair and recombination protein RAD54-like [Macaca mulatta] Length = 511 Score = 37.8 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 12/26 (46%) Query: 172 AQNTIDELVLQRLRTKSTIQDLLLNA 197 TI+E + QR K + +++ Sbjct: 387 IAGTIEEKIFQRQSHKKALSSCVVDE 412 >gi|197333950|ref|YP_002155029.1| RNA polymerase-associated protein RapA (ATP-dependenthelicase hepA) [Vibrio fischeri MJ11] gi|254789700|sp|B5FGE9|RAPA_VIBFM RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|197315440|gb|ACH64887.1| RNA polymerase-associated protein RapA (ATP-dependenthelicase hepA) [Vibrio fischeri MJ11] Length = 969 Score = 37.8 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 20/137 (14%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYH-----------FNSDLARLQKAFPQGRTLDKDPCT 100 D ++ L ++++ +++ F +G ++ + Sbjct: 489 FDPRVNWLLELLKENRNEKVLIIASRASTALQLEQALREREGIRGTVFHEGMSIIERDKA 548 Query: 101 IQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + EG +L G N Q+ N LV F L ++ + +Q I R+ + Sbjct: 549 AAYFAQEEGGAQVLICS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLEQRIGRLD-----R 601 Query: 159 AGFKRAVFVYYLIAQNT 175 G KR + ++ Q T Sbjct: 602 IGQKRDIEIHVPYLQGT 618 >gi|158520071|ref|YP_001527941.1| DEAD/DEAH box helicase domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158508897|gb|ABW65864.1| DEAD/DEAH box helicase domain protein [Desulfococcus oleovorans Hxd3] Length = 464 Score = 37.8 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 12/123 (9%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLAR----------LQKAFPQGRT 93 ++ + D K+ L II + N + ++V + ++R + Sbjct: 278 DQVVYIVTSDRKLALLYNIIVQQNLSRVLVFCNRKDAVSRLADRLTRYGIKCEILTGDVP 337 Query: 94 LDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 K ++++ GKI +L A + +V F L D E++ I R G Sbjct: 338 QQKRSRRLEDFKSGKIRVLVATDVMARGIH--VEDMDHVVNFDLPHDPEDYVHRIGRTGR 395 Query: 154 TRQ 156 Sbjct: 396 AGA 398 >gi|13542321|ref|NP_112009.1| RNA helicase (ERCC4-like) [Thermoplasma volcanium GSS1] gi|14325756|dbj|BAB60659.1| translation initiation factor eIF4A [Thermoplasma volcanium GSS1] Length = 513 Score = 37.8 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 59/197 (29%), Gaps = 22/197 (11%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSAS-----KTVKCLQLANGAVYYDEEKHWKEVHDEKI 56 + Y + D + N K +K L++ V E Sbjct: 304 RAYSMMK--SLDDFRKAIENMKNVLPGYRNPKMMKVLEICQEKVIAGERAIVFTHFRATS 361 Query: 57 KALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHP 116 L ++ ++ + + + G + ++ I+++ G +L A Sbjct: 362 DMLLAYLKNSSDKIKP-----VRFIGQADRGTDVGLSQEEQRQIIEQFRNGTYNVLIATS 416 Query: 117 ASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTI 176 + +++VF+ Q R G +R VY L+ +N+ Sbjct: 417 IAEEGLDI--PDTDVVVFYEAVPSEIRFIQRKGRTGRSRSG--------EVYILVYENSR 466 Query: 177 DELVLQRLRTKSTIQDL 193 D R K ++ + Sbjct: 467 DMAYYYRSLKKVSMMNR 483 >gi|294632183|ref|ZP_06710743.1| SNF2/RAD54 family helicase [Streptomyces sp. e14] gi|292835516|gb|EFF93865.1| SNF2/RAD54 family helicase [Streptomyces sp. e14] Length = 284 Score = 37.8 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 10/42 (23%), Gaps = 2/42 (4%) Query: 3 QYHKFQRELYCDLQGENIEAFN--SASKTVKCLQLANGAVYY 42 Y RE ++ A Q+ + Y Sbjct: 204 LYEAVVRESMHVIETAEGMARRGLVLKLLTSLKQICDHPALY 245 >gi|169237324|ref|YP_001690529.1| RAD25-type DNA repair helicase [Halobacterium salinarum R1] gi|167728840|emb|CAP15732.1| RAD25-type DNA repair helicase [Halobacterium salinarum R1] Length = 469 Score = 37.8 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 49/137 (35%), Gaps = 11/137 (8%) Query: 55 KIKALEVIIEKANAAPIIVAY---HFNSDLARL--QKAFPQGRTLDKDPCTIQEWNEGKI 109 K+ L+ ++++ I+ F D+++ D+ ++ + G+ Sbjct: 331 KLDTLDNLLKRHYDDRTIIFTANNDFAYDISQEFIVPCITHQTQTDERTEILERFRTGEY 390 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L N+ + S ++ Q + RI + + +Y Sbjct: 391 SMLVTSQVL--DEGIDVPAANVGIILSGSASKRQYAQRLGRILRPTEDR----EPARLYE 444 Query: 170 LIAQNTIDELVLQRLRT 186 LI +T+++ V +R R Sbjct: 445 LITDDTMEQYVSKRRRQ 461 >gi|119470571|ref|ZP_01613274.1| ATP-dependent helicase HepA [Alteromonadales bacterium TW-7] gi|119446272|gb|EAW27549.1| ATP-dependent helicase HepA [Alteromonadales bacterium TW-7] Length = 964 Score = 37.8 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 9/97 (9%) Query: 88 FPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + + +L G N Q+ + LV F L + + + Sbjct: 530 FHEGMSIIERDRAAAFFADEYDNAQILLCS-EIGSEGRNFQF-SHHLVLFDLPLNPDLLE 587 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 Q I R+ + G + V ++ +NT E++L+ Sbjct: 588 QRIGRLD-----RIGQTQDVNIHVPYFENTAQEVLLR 619 >gi|15839285|ref|NP_299973.1| ATP-dependent RNA helicase RhlB [Xylella fastidiosa 9a5c] gi|9107937|gb|AAF85493.1|AE004075_8 ATP-dependent RNA helicase [Xylella fastidiosa 9a5c] Length = 544 Score = 37.8 bits (86), Expect = 0.94, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 13/141 (9%) Query: 54 EKIKALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQ-------GRTLDKDPCTIQE 103 EKI L ++ ++ +V + F +AR K + Sbjct: 244 EKIPLLLGLLSRSEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNR 303 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +G++ +L A + G N + + L +D E++ I R Sbjct: 304 FQKGQLEILVATDVAARGLHI--DGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISF 361 Query: 164 AVFVYYLIAQNTIDELVLQRL 184 A Y + + I+ + Q++ Sbjct: 362 ACERYAMSLPD-IEAYIEQKI 381 >gi|32363421|sp|Q9PA24|RHLB_XYLFA RecName: Full=ATP-dependent RNA helicase rhlB Length = 543 Score = 37.8 bits (86), Expect = 0.94, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 13/141 (9%) Query: 54 EKIKALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQ-------GRTLDKDPCTIQE 103 EKI L ++ ++ +V + F +AR K + Sbjct: 243 EKIPLLLGLLSRSEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNR 302 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +G++ +L A + G N + + L +D E++ I R Sbjct: 303 FQKGQLEILVATDVAARGLHI--DGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISF 360 Query: 164 AVFVYYLIAQNTIDELVLQRL 184 A Y + + I+ + Q++ Sbjct: 361 ACERYAMSLPD-IEAYIEQKI 380 >gi|71901632|ref|ZP_00683711.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal [Xylella fastidiosa Ann-1] gi|71728608|gb|EAO30760.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal [Xylella fastidiosa Ann-1] Length = 544 Score = 37.8 bits (86), Expect = 0.94, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 13/141 (9%) Query: 54 EKIKALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQ-------GRTLDKDPCTIQE 103 EKI L ++ ++ +V + F +AR K + Sbjct: 244 EKIPLLLGLLSRSEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNR 303 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +G++ +L A + G N + + L +D E++ I R Sbjct: 304 FQKGQLEILVATDVAARGLHI--DGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISF 361 Query: 164 AVFVYYLIAQNTIDELVLQRL 184 A Y + + I+ + Q++ Sbjct: 362 ACERYAMSLPD-IEAYIEQKI 381 >gi|71275290|ref|ZP_00651577.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal [Xylella fastidiosa Dixon] gi|71902030|ref|ZP_00684074.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal [Xylella fastidiosa Ann-1] gi|71164099|gb|EAO13814.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal [Xylella fastidiosa Dixon] gi|71728209|gb|EAO30396.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal [Xylella fastidiosa Ann-1] Length = 544 Score = 37.8 bits (86), Expect = 0.94, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 13/141 (9%) Query: 54 EKIKALEVIIEKANAAPIIVAYH---FNSDLARLQKAFPQ-------GRTLDKDPCTIQE 103 EKI L ++ ++ +V + F +AR K + Sbjct: 244 EKIPLLLGLLSRSEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNR 303 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + +G++ +L A + G N + + L +D E++ I R Sbjct: 304 FQKGQLEILVATDVAARGLHI--DGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISF 361 Query: 164 AVFVYYLIAQNTIDELVLQRL 184 A Y + + I+ + Q++ Sbjct: 362 ACERYAMSLPD-IEAYIEQKI 381 >gi|195569077|ref|XP_002102538.1| GD19449 [Drosophila simulans] gi|194198465|gb|EDX12041.1| GD19449 [Drosophila simulans] Length = 793 Score = 37.8 bits (86), Expect = 0.97, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 11/41 (26%), Gaps = 1/41 (2%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY 42 + Y +F + GE I ++ Q Sbjct: 638 EIYERFLK-SLGYNPGEKILGIYILVLLLRLRQFCCHPGLM 677 >gi|186475006|ref|YP_001856476.1| SNF2-like protein [Burkholderia phymatum STM815] gi|184191465|gb|ACC69430.1| SNF2-related protein [Burkholderia phymatum STM815] Length = 990 Score = 37.8 bits (86), Expect = 0.97, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 10/102 (9%) Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQR---QAGFKRAVFVY 168 L GLNLQ+ L+FFS+ W +Q I R+ +R + ++ Sbjct: 447 LLIAADLAQVGLNLQH-ARKLIFFSIPWSPIAVEQWIGRLDRLGSAALEHQPGERNIDIF 505 Query: 169 YLIAQNTIDELVLQRL------RTKSTIQDLLLNALKKETIH 204 + + +DE V+ L + +N + + + Sbjct: 506 TICQRGQVDERVVSILDDFGIFERSIRLDGDEINIVSQHIVE 547 >gi|311269517|ref|XP_003132525.1| PREDICTED: helicase-like transcription factor-like [Sus scrofa] Length = 459 Score = 37.8 bits (86), Expect = 0.97, Method: Composition-based stats. Identities = 4/43 (9%), Positives = 11/43 (25%), Gaps = 6/43 (13%) Query: 2 KQYHKFQRELYC----DLQGENIEA--FNSASKTVKCLQLANG 38 K Y + + + A + ++ Q+ Sbjct: 339 KIYQSVKNDGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCH 381 >gi|261881069|ref|ZP_06007496.1| DNA methylase N-4/N-6 [Prevotella bergensis DSM 17361] gi|270332187|gb|EFA42973.1| DNA methylase N-4/N-6 [Prevotella bergensis DSM 17361] Length = 736 Score = 37.8 bits (86), Expect = 0.97, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 10/105 (9%) Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + K +L GLN Q + +F SL + E G+ R + G Sbjct: 343 FADKKFRVLITKLKIAQFGLNYQN-CHNQIFASLDFSFESTY-----QGIRRSYRFGQTD 396 Query: 164 AVFVYYLIAQNT---IDELVLQRLRTKSTIQDLLLNALKKETIHV 205 V +Y LI +T + +L++ ++ +Q + A + + Sbjct: 397 DVNIY-LIITDTMQNVRSSILEKQKSFVDMQHKMSEATSRNIKQI 440 >gi|260946988|ref|XP_002617791.1| hypothetical protein CLUG_01250 [Clavispora lusitaniae ATCC 42720] gi|238847663|gb|EEQ37127.1| hypothetical protein CLUG_01250 [Clavispora lusitaniae ATCC 42720] Length = 544 Score = 37.8 bits (86), Expect = 0.97, Method: Composition-based stats. Identities = 14/140 (10%), Positives = 41/140 (29%), Gaps = 31/140 (22%) Query: 6 KFQRELYCDLQGENIEAFNS-----------ASKTVKCLQLANGAVYYDEEK-------- 46 + Q E Y L ++I+A N + ++ + N +D + Sbjct: 389 EMQIEWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPFTTD 448 Query: 47 HWKEVHDEKIKALEVIIEKAN--AAPIIVAYH----------FNSDLARLQKAFPQGRTL 94 + K+ L+ +++K + +++ + + Sbjct: 449 EHLIYNSGKMIILDKMLKKFKAAGSRVLIFSQMSRLLDILEDYCYFREYEYCRIDGSTSH 508 Query: 95 DKDPCTIQEWNEGKIPLLFA 114 + I ++N ++ Sbjct: 509 EDRIEAIDDYNAPDSKKIYL 528 >gi|120597470|ref|YP_962044.1| ATP-dependent helicase HepA [Shewanella sp. W3-18-1] gi|189039399|sp|A1RFP5|RAPA_SHESW RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|120557563|gb|ABM23490.1| SNF2-related protein [Shewanella sp. W3-18-1] Length = 968 Score = 37.8 bits (86), Expect = 0.97, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 6/133 (4%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + + K + +I +A A + + + +++D E Sbjct: 498 FLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMSIIERDKAGAYFAQEEGG 557 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 G N Q+ + LV F L + + +Q I R+ + G K + ++ Sbjct: 558 AQALICSEIGSEGRNFQF-ASHLVLFDLPLNPDLLEQRIGRLD-----RIGQKNDIQIHL 611 Query: 170 LIAQNTIDELVLQ 182 ++T E ++Q Sbjct: 612 PYLEDTAQERLMQ 624 >gi|313242328|emb|CBY34484.1| unnamed protein product [Oikopleura dioica] Length = 763 Score = 37.8 bits (86), Expect = 0.98, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 4/79 (5%) Query: 82 ARLQKAFPQGRTLDKDPCTIQEWNE---GKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 T K I+ +N+ + L + G G NL G N ++ F Sbjct: 686 NIDYFRIDGSVTASKRTAFIESFNDLEDPRARLFLVSTKAGGIGTNL-VGANRVIIFDSS 744 Query: 139 WDLEEHQQMIERIGVTRQR 157 W+ Q + R+ Q Sbjct: 745 WNPAHDVQSLFRVYRFGQN 763 >gi|14590756|ref|NP_142826.1| putative helicase [Pyrococcus horikoshii OT3] gi|3257311|dbj|BAA29994.1| 902aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 902 Score = 37.8 bits (86), Expect = 0.98, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 58/194 (29%), Gaps = 17/194 (8%) Query: 5 HKFQR-ELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 + ++ + +L + + + Y+ + + E LE I+ Sbjct: 317 RQLEKLKRVLELGKKIGNKDSKLEVISDII------AYHIRKGEKVIIFTEFRDTLEYIL 370 Query: 64 EKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGL 123 K + + I++++E L GL Sbjct: 371 GKLPGILRERHGILLESDDIAKLHGGMKSEEIERE--IKKFHERSD--LLVSTDVASEGL 426 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL ++++ + W + +Q + RI QR+ V +A T D VL Sbjct: 427 NLH-VASVVINYEAPWSPIKLEQRVGRIWRLNQRKETNAYTV----FLATET-DLDVLNN 480 Query: 184 LRTKSTIQDLLLNA 197 L K + + Sbjct: 481 LYKKIMNIKEAIGS 494 >gi|146294389|ref|YP_001184813.1| ATP-dependent helicase HepA [Shewanella putrefaciens CN-32] gi|189029434|sp|A4YAN1|RAPA_SHEPC RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|145566079|gb|ABP77014.1| SNF2-related protein [Shewanella putrefaciens CN-32] Length = 968 Score = 37.8 bits (86), Expect = 0.99, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 6/133 (4%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + + K + +I +A A + + + +++D E Sbjct: 498 FLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMSIIERDKAGAYFAQEEGG 557 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 G N Q+ + LV F L + + +Q I R+ + G K + ++ Sbjct: 558 AQALICSEIGSEGRNFQF-ASHLVLFDLPLNPDLLEQRIGRLD-----RIGQKNDIQIHL 611 Query: 170 LIAQNTIDELVLQ 182 ++T E ++Q Sbjct: 612 PYLEDTAQERLMQ 624 >gi|223935786|ref|ZP_03627701.1| SNF2-related protein [bacterium Ellin514] gi|223895387|gb|EEF61833.1| SNF2-related protein [bacterium Ellin514] Length = 943 Score = 37.8 bits (86), Expect = 1.00, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 17/128 (13%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYH-----------FNSDLARLQKAFPQGRTLDKDPCT 100 D +I L +++K + +++ ++ F +G TL + Sbjct: 456 KDPRILWLVDLLQKLDPQKVLLICRTIEKVEAIDAALRRHVSIKTGIFHEGLTLVQRDRN 515 Query: 101 IQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAG 160 + E L G N Q+ + LV F L + E +Q I R+ + G Sbjct: 516 AAWFAEADGARLLLCSEIGSEGRNFQF-AHHLVLFDLPLNPELLEQRIGRLD-----RIG 569 Query: 161 FKRAVFVY 168 + + ++ Sbjct: 570 QTKDIHIH 577 >gi|319427743|gb|ADV55817.1| SNF2-related protein [Shewanella putrefaciens 200] Length = 968 Score = 37.8 bits (86), Expect = 1.00, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 6/133 (4%) Query: 50 EVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 + + K + +I +A A + + + +++D E Sbjct: 498 FLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMSIIERDKAGAYFAQEEGG 557 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 G N Q+ + LV F L + + +Q I R+ + G K + ++ Sbjct: 558 AQALICSEIGSEGRNFQF-ASHLVLFDLPLNPDLLEQRIGRLD-----RIGQKNDIQIHL 611 Query: 170 LIAQNTIDELVLQ 182 ++T E ++Q Sbjct: 612 PYLEDTAQERLMQ 624 >gi|68637903|emb|CAI36108.1| superfamily II DNA/RNA helicase [Pseudomonas syringae pv. phaseolicola] Length = 752 Score = 37.8 bits (86), Expect = 1.00, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L + F +++ Q R Sbjct: 630 RREDWILDQVDRGVDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 683 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 684 SWRIGQKQDVRVIFFGFIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 741 >gi|21233204|ref|NP_639121.1| ATP-dependent RNA helicase RhlB [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770146|ref|YP_244908.1| ATP-dependent RNA helicase RhlB [Xanthomonas campestris pv. campestris str. 8004] gi|188993353|ref|YP_001905363.1| ATP-dependent RNA helicase RhlB [Xanthomonas campestris pv. campestris str. B100] gi|32363344|sp|Q8P4D4|RHLB_XANCP RecName: Full=ATP-dependent RNA helicase rhlB gi|81303902|sp|Q4UPY5|RHLB_XANC8 RecName: Full=ATP-dependent RNA helicase rhlB gi|226739237|sp|B0RWT6|RHLB_XANCB RecName: Full=ATP-dependent RNA helicase rhlB gi|21115552|gb|AAM43476.1| ATP-dependent RNA helicase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575478|gb|AAY50888.1| ATP-dependent RNA helicase [Xanthomonas campestris pv. campestris str. 8004] gi|167735113|emb|CAP53325.1| ATP-dependent RNA helicase [Xanthomonas campestris pv. campestris] Length = 573 Score = 37.8 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 61/192 (31%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E I A + Q + + +EK L + Sbjct: 210 AYEHMNEPEKLVVETETITAA-------RVRQ-----------RIYFPSDEEKQTLLLGL 251 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + + + R+ + + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|153002296|ref|YP_001367977.1| ATP-dependent helicase HepA [Shewanella baltica OS185] gi|189029429|sp|A6WSX5|RAPA_SHEB8 RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|151366914|gb|ABS09914.1| SNF2-related protein [Shewanella baltica OS185] Length = 968 Score = 37.8 bits (86), Expect = 1.0, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 47/134 (35%), Gaps = 6/134 (4%) Query: 49 KEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGK 108 + + + K + +I +A A + + + +++D E Sbjct: 497 EFLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMSIIERDKAGAYFAQEEG 556 Query: 109 IPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 G N Q+ + LV F L + + +Q I R+ + G K + ++ Sbjct: 557 GAQALICSEIGSEGRNFQF-ASHLVLFDLPLNPDLLEQRIGRLD-----RIGQKNDIQIH 610 Query: 169 YLIAQNTIDELVLQ 182 ++T E +++ Sbjct: 611 LPYLEDTAQERLMK 624 >gi|212224218|ref|YP_002307454.1| Hef nuclease [Thermococcus onnurineus NA1] gi|212009175|gb|ACJ16557.1| helicase-associated endonuclease for fork-structured DNA [Thermococcus onnurineus NA1] Length = 789 Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 75/209 (35%), Gaps = 36/209 (17%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI----IEKANAAPI 71 + + ++ + + ++ +Y + + K++ L+ + +EK + I Sbjct: 306 EDKRTKSSRELMEDPRMRKV----IYLLVQAKELGIDHPKMEKLKELVKAQLEKKPNSKI 361 Query: 72 IVAYHFN------------------SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLF 113 IV ++ + + ++ +G + + T++ ++ G+ +L Sbjct: 362 IVFTNYRDTGKKIVEELRAMSVSAERFIGQASRSNDRGMSQKQQKETLERFSRGEFSVLV 421 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 A + GL++ ++++F+ Q R G R + V L+A+ Sbjct: 422 AT-SVGEEGLDVPEV-DLVIFYEPVPSAIRSIQRRGRTGRHRPGR--------VVILMAK 471 Query: 174 NTIDELVLQRLRTKSTIQDLLLNALKKET 202 T DE R K + + +E Sbjct: 472 GTRDEAYYWSSRRKERGMFEAIRKIAREL 500 >gi|315127723|ref|YP_004069726.1| ATP-dependent helicase HepA [Pseudoalteromonas sp. SM9913] gi|315016237|gb|ADT69575.1| ATP-dependent helicase HepA [Pseudoalteromonas sp. SM9913] Length = 964 Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 40/97 (41%), Gaps = 9/97 (9%) Query: 88 FPQGRTLDKDPCTIQEWNE--GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + + +L G N Q+ + LV F L + + + Sbjct: 530 FHEGMSIIERDRAAAFFADEYDNAQILLCS-EIGSEGRNFQF-SHHLVLFDLPLNPDLLE 587 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 Q I R+ + G + V ++ +NT E++L+ Sbjct: 588 QRIGRLD-----RIGQTQDVNIHVPYFENTAQEVLLR 619 >gi|70607390|ref|YP_256260.1| hypothetical protein Saci_1657 [Sulfolobus acidocaldarius DSM 639] gi|68568038|gb|AAY80967.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639] Length = 443 Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 34/211 (16%) Query: 1 MKQYHKF---QRELYCDLQGENIE-------AFNSASKTVKCLQLANG-------AVYYD 43 +K+Y + ++E Y +L+G+ E NS + K ++LA+ + + Sbjct: 242 IKEYVEMTSEEKERYKELRGKLKEFLSSRGMRLNSLNDFYKLIRLASKDKKAREALLAWH 301 Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDKDP 98 E KI+ L ++ + + IIV ++ L + D+ Sbjct: 302 ESLRLAVNSRAKIEKLRELLREFHDRKIIVFTRDTELAYDISKEFLIPVVTYKTSKDERF 361 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + ++ EG ++ A + + +R + R + Sbjct: 362 EILSKFKEGNYRVIVAS----------TVFDEGVDIPDAEIAIIMGGYGTKRQFIQRLGR 411 Query: 159 AGFKR--AVFVYYLIAQNTIDELVLQRLRTK 187 R + ++ + T D + +R K Sbjct: 412 ILRGRGKKALLIEIVTKGTADYRLSKRREYK 442 >gi|330900195|gb|EGH31614.1| DEAD/DEAH box helicase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 311 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L + F +++ Q R Sbjct: 189 RREDWILDQVDRGVDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 242 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 243 SWRIGQKQDVRVIFFGFIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 300 >gi|117617895|ref|YP_855406.1| ATP-dependent helicase HepA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|189029408|sp|A0KGL5|RAPA_AERHH RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|117559302|gb|ABK36250.1| RNA polymerase associated protein RapA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 955 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 8/124 (6%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE-WNEGKIPL 111 + + + VI +A A + + R L++D + EG + Sbjct: 488 SARQQKVLVICSEAATAIALEEALRTREGIRGAVFHEGMSILERDKASAYFAQQEGGAQV 547 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G N Q+ + LV F L + + +Q I R+ + G + V ++ Sbjct: 548 LLCS-EIGSEGRNFQF-ASHLVLFDLPLNPDLLEQRIGRLD-----RIGQQNTVEIHVPY 600 Query: 172 AQNT 175 + T Sbjct: 601 LEGT 604 >gi|331250618|ref|XP_003337916.1| DNA repair protein rad5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309316906|gb|EFP93497.1| DNA repair protein rad5 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 607 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 18/167 (10%), Positives = 42/167 (25%), Gaps = 40/167 (23%) Query: 2 KQYHKFQRELYCDLQGENI-----EAFNSASKTVKCLQLANGAVYYDEEKHWKEV---HD 53 + Y K + + + + V QL + ++ Sbjct: 465 QIYEKNHETFVVQFGKNRVGGQGWNSSDFFGELVDLRQLCDHPALIEKGPGINNYGWNES 524 Query: 54 EKIKA----LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKI 109 KI ++ + +++ F L Sbjct: 525 SKIVHLVGDVKDFLCSGAVNRVVIFSEFKRFLEM-------------------------- 558 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 +L A + G G++L + W+ +Q ++R+ Q Sbjct: 559 -ILLATIKTAGVGIDL-RCAQKVYIMEPTWNPAVEEQAVDRLYRIGQ 603 >gi|209693956|ref|YP_002261884.1| ATP-dependent helicase HepA [Aliivibrio salmonicida LFI1238] gi|254789672|sp|B6EPV7|RAPA_ALISL RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|208007907|emb|CAQ78037.1| RNA polymerase-associated protein RapA (ATP-dependent helicase hepA) [Aliivibrio salmonicida LFI1238] Length = 969 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 20/137 (14%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYH-----------FNSDLARLQKAFPQGRTLDKDPCT 100 D ++ L ++++ +++ F +G ++ + Sbjct: 489 FDPRVNWLLELLKENRNEKVLIIASRASTALQLEQALREREGIRGTVFHEGMSIIERDKA 548 Query: 101 IQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + EG +L G N Q+ N LV F L ++ + +Q I R+ + Sbjct: 549 AAYFAQEEGGAQVLICS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLEQRIGRLD-----R 601 Query: 159 AGFKRAVFVYYLIAQNT 175 G KR + ++ Q T Sbjct: 602 IGQKRDIDIHVPYLQGT 618 >gi|73668740|ref|YP_304755.1| Hef nuclease [Methanosarcina barkeri str. Fusaro] gi|72395902|gb|AAZ70175.1| ATP-dependent RNA helicase, EIF-4A family [Methanosarcina barkeri str. Fusaro] Length = 938 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 46/120 (38%), Gaps = 13/120 (10%) Query: 79 SDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLW 138 + + + +G T + + ++ G+ +L A + GL++ ++++F+ Sbjct: 405 RFVGQASRRKDKGLTQKQQVEVLDKFRAGEYNVLVAT-SVAEEGLDIPST-DLVLFYEPI 462 Query: 139 WDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNAL 198 Q R G + + V L+ + T DE ++K +LN++ Sbjct: 463 PSEIRSIQRKGRTGRQHKGR--------VIILVTKGTRDEAYYWSSKSKEK---RMLNSM 511 >gi|224371108|ref|YP_002605272.1| RapA [Desulfobacterium autotrophicum HRM2] gi|223693825|gb|ACN17108.1| RapA [Desulfobacterium autotrophicum HRM2] Length = 905 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 6/95 (6%) Query: 81 LARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWD 140 + F Q TL + + + E L G N Q+ + LV F L + Sbjct: 465 ITMKIARFTQDMTLVQRDRSAAWFAEPLGAELMICSEIGSEGRNFQF-AHHLVMFDLPDN 523 Query: 141 LEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 E +Q I R+ + G + ++ A ++ Sbjct: 524 PELVEQRIGRLD-----RIGQHHPIVIHVPYAHDS 553 >gi|227824325|ref|ZP_03989157.1| DEAD-box ATP-dependent RNA helicase ydbR [Acidaminococcus sp. D21] gi|226904824|gb|EEH90742.1| DEAD-box ATP-dependent RNA helicase ydbR [Acidaminococcus sp. D21] Length = 444 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 41/142 (28%), Gaps = 10/142 (7%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPI 71 D+ + A Q+ +E+ + + D L ++ + Sbjct: 233 LIDIDPKEATASTI-------HQVCIKVSEDHKEEALQTIIDRCNPFLM-LVFCKSKERA 284 Query: 72 IVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNI 131 I Y + + K ++ + + K +L A + G Sbjct: 285 IEVYDWLYGKGFNADVLHGDMSQQKRRQAMERFRKAKTQILVASDIAARGLD--VEGVTQ 342 Query: 132 LVFFSLWWDLEEHQQMIERIGV 153 +V F + D + + I R G Sbjct: 343 VVNFDIPHDPDWYVHRIGRTGR 364 >gi|78190817|gb|ABB29730.1| SNF2 family DNA-dependent ATPase domain-containing protein [Monosiga brevicollis] Length = 171 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 10/85 (11%) Query: 59 LEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWN-EGKIPLLFAHPA 117 I+++ + + G + + E+N + I +L + Sbjct: 95 FLDIVQEELLDKHLPEVTYRR--------LDGGVPAQQRHDIVVEFNEDPSIDVLLLTTS 146 Query: 118 SCGHGLNLQYGGNILVFFSLWWDLE 142 G GL L G + ++F W+ Sbjct: 147 VGGLGLTLT-GADTVIFLEHDWNPM 170 >gi|330977482|gb|EGH77428.1| DNA topoisomerase III [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 145 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L + F +++ Q R Sbjct: 23 RREDWILDQVDRGVDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 76 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLL--------LNALKKETIHV 205 + G K+ V V + + LQ + K + L++L ++ V Sbjct: 77 SWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQSTSGDVPESGLDSLNQDGDSV 134 >gi|257454149|ref|ZP_05619422.1| RNA polymerase-associated protein RapA [Enhydrobacter aerosaccus SK60] gi|257448477|gb|EEV23447.1| RNA polymerase-associated protein RapA [Enhydrobacter aerosaccus SK60] Length = 949 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 34/91 (37%), Gaps = 6/91 (6%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 TL + + + + + G N Q+ + LV F L + + +Q I R+ Sbjct: 515 MTLLERDQAAAYFADIEGAQVLLASEIGSEGRNFQF-ASDLVLFDLPANPDTLEQRIGRL 573 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 + G + + ++ + T E + + Sbjct: 574 D-----RIGQQNEITIHVPFVEGTATERMYR 599 >gi|315050314|ref|XP_003174531.1| hypothetical protein MGYG_02060 [Arthroderma gypseum CBS 118893] gi|311339846|gb|EFQ99048.1| hypothetical protein MGYG_02060 [Arthroderma gypseum CBS 118893] Length = 566 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 8/122 (6%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLF 113 ++ +++I A ++ L ++ G ++ +++ +L Sbjct: 367 LRKEKLLIFATMPAQVLWLESVLQHLDLDAHSYRAGLKVEDRQILTDTFHKSPNKCYILI 426 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 C GLNLQ LVF+ +E+ + R ++ G + + ++ L + Sbjct: 427 TSFWVCCTGLNLQGHCRNLVFWDSAPI------SVEQQALGRLKRVGATKTIRLFRLYVE 480 Query: 174 NT 175 NT Sbjct: 481 NT 482 >gi|330952513|gb|EGH52773.1| DEAD/DEAH box helicase [Pseudomonas syringae Cit 7] Length = 752 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 6/98 (6%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + + + +L +P GL+L + F +++ Q R Sbjct: 630 RREDWILDQVDRGVDVLITNPELVKTGLDLLDF-PTIAFMQTGYNVYTVQ-----QAARR 683 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDL 193 + G K+ V V + + LQ + K + Sbjct: 684 SWRIGQKQNVRVIFFGYIGSSQITCLQLMAKKIAVSQS 721 >gi|293370317|ref|ZP_06616874.1| N-6 DNA Methylase [Bacteroides ovatus SD CMC 3f] gi|292634612|gb|EFF53144.1| N-6 DNA Methylase [Bacteroides ovatus SD CMC 3f] Length = 1000 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 22/188 (11%), Positives = 57/188 (30%), Gaps = 18/188 (9%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 +A + +K L A + E + K + +E ++ K + Sbjct: 771 GDAKKDAGLRLMRQIKLLIKACSVPHLIEGYSGDGIPS-KTRYIERLVRKIPGKVAVGCT 829 Query: 76 HF-----------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 R K + E++ +L S +N Sbjct: 830 SIAAFDLYEKRLRECFPDRPVFTVKGDVAFKKRQSIVTEFDSTVNGILVCTQQSLSSSVN 889 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 + ++++ W + Q R + K V+Y+ ++++++ ++ + Sbjct: 890 IPTCNDVILESLQWNIPKMEQFY------FRFIRLDSKELKDVHYVTYKDSVEQNLMALV 943 Query: 185 RTKSTIQD 192 TK + + Sbjct: 944 LTKERLNE 951 >gi|152012467|gb|AAI50169.1| Si:ch211-278b8.3 protein [Danio rerio] Length = 579 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 16/187 (8%), Positives = 44/187 (23%), Gaps = 49/187 (26%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEV----------- 51 Y+KF ++ + ++ +L + + + Sbjct: 394 IYNKFI--SLDQIKELLTTTRSPLAELTVLKKLCDHPRLLSQRAVIQLGLERGSDSELVH 451 Query: 52 ---------------------HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAF 88 K++ + ++E ++ L +++ Sbjct: 452 SDESESAVSQIDNISDHTLIEESGKLQFVVSLMECLREEGHRTLIFSQSRKMLDIMERVL 511 Query: 89 PQGRTL-----------DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFS 136 + I + + + + G G+ L G N +V F Sbjct: 512 RNRNFRLLRLDGTVTQLAEREKRISLFQTDKRYTIFLLTTQVGGVGITLT-GANRVVIFD 570 Query: 137 LWWDLEE 143 W+ Sbjct: 571 PSWNPAT 577 >gi|121998794|ref|YP_001003581.1| DEAD/DEAH box helicase domain-containing protein [Halorhodospira halophila SL1] gi|121590199|gb|ABM62779.1| DEAD/DEAH box helicase domain protein [Halorhodospira halophila SL1] Length = 430 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 4/62 (6%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGG-NILVFFSLWWDLEEHQQMIERI 151 +K ++++ G++P+L + L + ++ F L D E++ I R Sbjct: 289 PQNKREQLLEQFRTGELPVLVGTDVAAR---GLHIDAVSHVINFDLPHDPEDYVHRIGRT 345 Query: 152 GV 153 Sbjct: 346 AR 347 >gi|295658214|ref|XP_002789669.1| MIZ zinc finger protein [Paracoccidioides brasiliensis Pb01] gi|226283154|gb|EEH38720.1| MIZ zinc finger protein [Paracoccidioides brasiliensis Pb01] Length = 507 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%) Query: 159 AGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 KR V L+ +++++ELV Q K + ++ +K Sbjct: 223 LTQKRHFVVINLVRKHSVEELVKQLQNRKIISSEQVIREMKNR 265 >gi|85711786|ref|ZP_01042842.1| Probable ATP-dependent RNA helicase HepA [Idiomarina baltica OS145] gi|85694401|gb|EAQ32343.1| Probable ATP-dependent RNA helicase HepA [Idiomarina baltica OS145] Length = 884 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 10/96 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G +L + + + ++ P+L G N Q+ + LV F L + + + Sbjct: 454 FHEGMSLLERDRAAEFFADDDNGSPILLCS-EIGSEGRNFQFV-HQLVLFDLPENPDLLE 511 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVL 181 Q I R+ + G + +Y +++ DE +L Sbjct: 512 QRIGRLD-----RIGQTHDIAIYLPYTEDS-DEGIL 541 >gi|294055537|ref|YP_003549195.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] gi|293614870|gb|ADE55025.1| SNF2-related protein [Coraliomargarita akajimensis DSM 45221] Length = 945 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 17/125 (13%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNS-----------DLARLQKAFPQGRTLDKDPCTIQE 103 +IK L ++ + N + +++ ++ F + TL + Sbjct: 465 RIKWLAELLRELNNSKVLLICRSKEKVEAIYSALLEEINVKAAVFHEELTLLQRDRNAAW 524 Query: 104 WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKR 163 + + + + G N Q+ + LV F L + E +Q I R+ + G Sbjct: 525 FADPEGARILLCSEIGSEGRNFQF-AHHLVLFDLPMNPELLEQRIGRLD-----RIGQTE 578 Query: 164 AVFVY 168 + V+ Sbjct: 579 TIRVH 583 >gi|297746282|emb|CBI16338.3| unnamed protein product [Vitis vinifera] Length = 1452 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 11/103 (10%), Positives = 35/103 (33%), Gaps = 10/103 (9%) Query: 91 GRTLDKDPCTIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMI 148 G + + ++N + + +C + L + ++ F W+ + + Sbjct: 1036 GGVPSRKQAALNKFNNKESGRFVFLLEIRACLSSIKL-SSVDTIIIFDSDWNPVNDLRAL 1094 Query: 149 ERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQ 191 +I + + ++ L + T++E + K + Sbjct: 1095 NKITID-----SQFEKIKLFRLYSPFTVEEK--SLILAKHDMA 1130 >gi|83954759|ref|ZP_00963470.1| hypothetical protein NAS141_16098 [Sulfitobacter sp. NAS-14.1] gi|83841043|gb|EAP80214.1| hypothetical protein NAS141_16098 [Sulfitobacter sp. NAS-14.1] Length = 853 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 13/102 (12%) Query: 97 DPCTIQEWNEGKIP--LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 +N +L A GLNL +V W+ +Q I R+ Sbjct: 701 RRLLQSAFNRASSWPMVLLAQSRVGREGLNLHEACRTVVILHAEWNPGIVEQQIGRVDRK 760 Query: 155 RQR----------QAGFKRA-VFVYYLIAQNTIDELVLQRLR 185 +A + ++ ++ T D+ Q L+ Sbjct: 761 GSCWLKDLDYWHERAEGDPPRIRIHPVVVSGTYDDHNWQVLK 802 >gi|330432060|gb|AEC17119.1| ATP-dependent helicase HepA [Gallibacterium anatis UMN179] Length = 972 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 22/181 (12%), Positives = 55/181 (30%), Gaps = 24/181 (13%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVK-CLQLANGA---VYYDEEKHWKEVHDEKIKALE 60 + ++ +L + A + K Q + + + D +I+ L Sbjct: 439 KRILHQVKLELPKQYANAIKVVNLLNKTVQQNSLYPEVLFHQLNPEAAWWDFDPRIEWLL 498 Query: 61 VIIEKANAAPIIVAYHFNSDLARLQ-------------KAFPQGRTLDKDPCTIQEWNEG 107 ++ + +++ + +L+ E Sbjct: 499 TFLKNHSQEKVLIICQQTETVLQLEKILREKEGIRSAVFHEKMSIVERDRAAAYFAQQED 558 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 +L + + G N Q+ ++ F+L + + +Q I R+ + G R V + Sbjct: 559 GAKVLLSS-SIGAEGRNFQFACRLV-LFNLPVNPDVLEQSIGRLD-----RIGQTRDVQI 611 Query: 168 Y 168 Y Sbjct: 612 Y 612 >gi|170070638|ref|XP_001869656.1| transcription termination factor 2 [Culex quinquefasciatus] gi|167866546|gb|EDS29929.1| transcription termination factor 2 [Culex quinquefasciatus] Length = 991 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 3/60 (5%), Positives = 17/60 (28%), Gaps = 6/60 (10%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKALEVIIEKANAAP 70 ++++ ++ Q+ + E + + + ++ + N Sbjct: 803 KDDVKQHEILVLLLRLRQICCHPGLIHKMLDDDEGNFHDVSGNNEEAPELDLLAQLNNLK 862 >gi|289664841|ref|ZP_06486422.1| ATP-dependent RNA helicase RhlB [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 493 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 62/192 (32%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E I A + Q + + +EK L + Sbjct: 210 AYEHMNEPEKLVVETETITAA-------RVRQ-----------RIYFPSDEEKQTLLLGL 251 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + + + R+ +A + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKAFVERVARALERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|302759218|ref|XP_002963032.1| hypothetical protein SELMODRAFT_404554 [Selaginella moellendorffii] gi|300169893|gb|EFJ36495.1| hypothetical protein SELMODRAFT_404554 [Selaginella moellendorffii] Length = 1398 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 40/127 (31%), Gaps = 23/127 (18%) Query: 70 PIIVAYHFN----SDLARLQKAFPQGRTLDKDPC--TIQEWNEGKIPLLFAHPASCGHGL 123 I+V + + A R + +I E+ + I + +GL Sbjct: 571 KILVFSTWQVLDLLEHALKSNKLSWVRLKHRRQMGSSILEFKKKNIQAMLLP-----NGL 625 Query: 124 NLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 NL ++ + +E + R + G + V+ I E + + Sbjct: 626 NLTE-AQHVILVEPLLNPA-----VEAQAINRVHRIGQRPKTLVHRFI------ENIYKM 673 Query: 184 LRTKSTI 190 + K+ + Sbjct: 674 SQQKTNL 680 >gi|289671093|ref|ZP_06492168.1| ATP-dependent RNA helicase RhlB [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 446 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 62/192 (32%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E I A + Q + + +EK L + Sbjct: 210 AYEHMNEPEKLVVETETITAA-------RVRQ-----------RIYFPSDEEKQTLLLGL 251 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + + + R+ +A + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKAFVERVARALERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAISL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|166366739|ref|YP_001659012.1| helicase protein [Microcystis aeruginosa NIES-843] gi|166089112|dbj|BAG03820.1| probable helicase protein [Microcystis aeruginosa NIES-843] Length = 500 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 52/143 (36%), Gaps = 10/143 (6%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDK 96 + E K K++ L +I + + PI++ + + + L A + + Sbjct: 309 HRESKEISSGTQGKLRVLAELICEHHPEPILIFTNDNATVYRISESFLIPAITHQTPVKE 368 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + +G+ +L I + S ++ I+R+G + Sbjct: 369 RHEILTRFRQGEYKILVTSHVLNEGVD--VPEARIAIILSGTGS---TREYIQRLGRVLR 423 Query: 157 RQAGFKRAVFVYYLIAQNTIDEL 179 + + +Y +IA+NT +E Sbjct: 424 KGQQEDKRAILYEVIAENTTEEK 446 >gi|120554239|ref|YP_958590.1| helicase domain-containing protein [Marinobacter aquaeolei VT8] gi|120324088|gb|ABM18403.1| helicase domain protein [Marinobacter aquaeolei VT8] Length = 982 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 6/77 (7%) Query: 98 PCTIQEWNEGKIPL-LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 ++ + G P+ L G+NL + + ++ + L W + Q RI Sbjct: 489 AAAVEAFGTGNSPVRLMLATDVASEGVNLHHQCHNIIHYDLPWSIITLIQRNGRID---- 544 Query: 157 RQAGFKRAVFVYYLIAQ 173 + G K + YL+ + Sbjct: 545 -RFGQKYPPIIRYLMVE 560 >gi|88811449|ref|ZP_01126704.1| ATP-dependent RNA helicase [Nitrococcus mobilis Nb-231] gi|88791338|gb|EAR22450.1| ATP-dependent RNA helicase [Nitrococcus mobilis Nb-231] Length = 437 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 3/92 (3%) Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIG 152 K +Q + EGK+P+L A + + +V + L + E++ I R Sbjct: 289 PQKKREQLLQRFQEGKLPMLVATDVAARGLHI--PDVSRIVNYDLPQNAEDYVHRIGRTA 346 Query: 153 VTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 A Y I+ + Q++ Sbjct: 347 RAGASGDAISFACEAYVYSLPE-IEAYIHQKI 377 >gi|170290318|ref|YP_001737134.1| helicase domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170174398|gb|ACB07451.1| helicase domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 975 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 7/86 (8%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + + +L A GLNLQ +IL+ + + W L + +Q I R+ + G + Sbjct: 462 FERDPRARVLIAT-DVAAEGLNLQ-VAHILINYEVPWSLIKLEQRIGRVW-----RLGQR 514 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKS 188 R V +Y L N D L+ + K Sbjct: 515 REVEIYTLFMANKADSTALRSIYEKL 540 >gi|126659499|ref|ZP_01730632.1| Type III restriction enzyme, res subunit [Cyanothece sp. CCY0110] gi|126619233|gb|EAZ89969.1| Type III restriction enzyme, res subunit [Cyanothece sp. CCY0110] Length = 493 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 51/150 (34%), Gaps = 10/150 (6%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDK 96 + E K + K++ L ++ + + +++ + + L A + + Sbjct: 310 HREAKEIAAGTEGKLRVLAELVCEHHQDSLLIFTNDNATVYRISQEFLIPAITHQTPVKE 369 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + EG L + + ++R+G + Sbjct: 370 RHDILTRFREGIYKSLVTSHVLNEGV---DVPEVKVAIIISGTSSAR--EYVQRLGRILR 424 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + G + +Y ++A++T +E + QR + Sbjct: 425 KGKGKNKLATLYEIVAEDTSEERISQRRKE 454 >gi|10803640|ref|NP_046038.1| hypothetical protein VNG7093 [Halobacterium sp. NRC-1] gi|16120082|ref|NP_395670.1| DNA repair protein [Halobacterium sp. NRC-1] gi|169237281|ref|YP_001690487.1| RAD25-type DNA repair helicase [Halobacterium salinarum R1] gi|2822371|gb|AAC82877.1| unknown [Halobacterium sp. NRC-1] gi|10584184|gb|AAG20805.1| DNA repair protein [Halobacterium sp. NRC-1] gi|167728347|emb|CAP15151.1| RAD25-type DNA repair helicase [Halobacterium salinarum R1] Length = 469 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 49/137 (35%), Gaps = 11/137 (8%) Query: 55 KIKALEVIIEKANAAPIIVAY---HFNSDLARL--QKAFPQGRTLDKDPCTIQEWNEGKI 109 K+ L+ ++++ I+ F D+++ D+ ++ + G+ Sbjct: 331 KLDTLDNLLKRHYNDRTIIFTANNDFAYDISQEFIVPCITHQTQTDERTEILERFRTGEY 390 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L N+ + S ++ Q + RI + + +Y Sbjct: 391 SMLVTSQVL--DEGIDVPAANVGIILSGSASKRQYAQRLGRILRPTEDR----EPARLYE 444 Query: 170 LIAQNTIDELVLQRLRT 186 LI +T+++ V +R R Sbjct: 445 LITDDTMEQYVSKRRRQ 461 >gi|15791152|ref|NP_280976.1| Hef nuclease [Halobacterium sp. NRC-1] gi|169236908|ref|YP_001690108.1| Hef nuclease [Halobacterium salinarum R1] gi|10581766|gb|AAG20456.1| ATP-dependent RNA helicase homolog eIF-4A [Halobacterium sp. NRC-1] gi|167727974|emb|CAP14762.1| nuclease domain protein / probable ATP-dependent helicase [Halobacterium salinarum R1] Length = 784 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 10/111 (9%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T + T+ E+ G +L + GL++ ++++FF Q R Sbjct: 410 GMTQTEQRETLAEFRNGDFEVLV-STSVAEEGLDVPEV-DLVLFFEPVPTAIRSVQRKGR 467 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 G + V L+A++T DE R + L +LK Sbjct: 468 TGRQTAGR--------VVVLLAEDTRDEAYFWISRRREQEMTEELQSLKGR 510 >gi|109287965|ref|YP_654659.1| hypothetical protein MIV087L [Invertebrate iridescent virus 3] gi|123878654|sp|Q196X3|VF022_IIV3 RecName: Full=Putative helicase 087L gi|106073588|gb|ABF82117.1| hypothetical protein MIV087L [Aedes taeniorhynchus iridescent virus] Length = 980 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 41/150 (27%), Gaps = 23/150 (15%) Query: 70 PIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEG------KIPLLFAH--PASCGH 121 + +F R + T + I +N I + Sbjct: 417 KATPSSNFAKPQKRYAIFTNETSTDAQTKQLISAFNNPKNLKGEYISTILGSRVIMEGFS 476 Query: 122 GLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRA----VFVYYLIA----- 172 N+Q S W+ E Q+I R K V +Y+ ++ Sbjct: 477 FKNIQSE----YILSPHWNYSETSQIIARGLRLGSHNDLKKNNIKFEVRIYHYVSLANKN 532 Query: 173 --QNTIDELVLQRLRTKSTIQDLLLNALKK 200 +ID + + K +L +K+ Sbjct: 533 YPAESIDLHMYEIAEEKDLEIQKILRYIKE 562 >gi|258546120|ref|ZP_05706354.1| ATP-dependent RNA helicase RhlB [Cardiobacterium hominis ATCC 15826] gi|258518545|gb|EEV87404.1| ATP-dependent RNA helicase RhlB [Cardiobacterium hominis ATCC 15826] Length = 444 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 40/154 (25%), Gaps = 16/154 (10%) Query: 44 EEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHF---NSDLAR----------LQKAFPQ 90 + H K + ++I N + F DL R A Sbjct: 228 DNITQILYHTAKHEKTPLLIGLLNRDKPARSMIFLNTKRDLERLSVVLEANGYPNAALSG 287 Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 K I+++ G + ++ A + + + L E++ I R Sbjct: 288 DIPQKKREKIIKDFQSGAVNIVVATDVAARGLHI--PDVTHVFNYDLPQVAEDYVHRIGR 345 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 A Y I+ + +L Sbjct: 346 TARAGASGTAISFACEEYVYSLPE-IEHYIHNKL 378 >gi|6707720|sp|O37319|NTP1_HAEPV RecName: Full=Nucleoside triphosphatase I; AltName: Full=Nucleoside triphosphate phosphohydrolase I; Short=NPH I gi|2460172|gb|AAB96624.1| nucleoside triphosphatase I [Heliothis armigera entomopoxvirus 'L'] Length = 646 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 105 NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ--AGFK 162 N + + G N ++ + W+ E +Q++ R Sbjct: 440 NNDGKNIKVCIFSYAGSEGISFKCVNDIIILDMPWNESELKQIMGRSIRLNSHNDLPLEN 499 Query: 163 RAVFVYYLIA----QNTIDELVLQRLRTKSTIQDLLLNALKK---ETIH 204 R V V+++I+ + ++D+ +L ++ K + +++ + LK E+IH Sbjct: 500 RYVNVHFIISYTNNRKSVDKEILDIIKDKQSKINVVFDLLKSISIESIH 548 >gi|227504269|ref|ZP_03934318.1| ATP-dependent DNA helicase [Corynebacterium striatum ATCC 6940] gi|227199156|gb|EEI79204.1| ATP-dependent DNA helicase [Corynebacterium striatum ATCC 6940] Length = 543 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 11/140 (7%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDL-----ARLQKAFPQGRTLDKDPCTIQEWNE 106 K +A++ I+ + ++ + L + K Q++ E Sbjct: 392 SSTKHRAVDKILAQHAGQQALIIGGYVDQLEELGKHLDAPVIDGKTSNAKREKLFQQFRE 451 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G + +L ++L + + Q+ +R+G + +A K A F Sbjct: 452 GALQILVVS-KVANFSIDLPEAALAIQVSGTFGS---RQEEAQRLGRLLRPKADGKEATF 507 Query: 167 VYYLIAQNTID-ELVLQRLR 185 Y L+ +++ID E L R R Sbjct: 508 -YTLVTRDSIDAEYALHRQR 526 >gi|118377404|ref|XP_001021881.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila] gi|89303648|gb|EAS01636.1| Helicase conserved C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 987 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 27/76 (35%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ +L G+NL +++ ++ E + + R + G Sbjct: 901 FKKVPEVRILIMSIEQAASGINLIEANHVIFMHPIFGVSYEKSRSTYAQCIGRALRVGQS 960 Query: 163 RAVFVYYLIAQNTIDE 178 + V +N+I++ Sbjct: 961 KPVHATLYCTKNSIEQ 976 >gi|113952800|ref|YP_729277.1| helicase [Synechococcus sp. CC9311] gi|113880151|gb|ABI45109.1| possible helicase [Synechococcus sp. CC9311] Length = 461 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 61/198 (30%), Gaps = 31/198 (15%) Query: 4 YHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVII 63 Y + E E+ + Q+A ++ + Sbjct: 268 YRQRVAEGLVRSDAES------LAVLTALRQIAAEFKLPAAQQLIQR------------- 308 Query: 64 EKANAAPIIVAYHFNSDLARLQKAF-----PQGRTLDKDPCTIQEWNEGKIPLLFAHPAS 118 + PI+V F L L + + D+ + + G+ LL A A+ Sbjct: 309 LRQQHKPIVVFSSFVDPLLLLHERLGGVLLTGRQKPDQRQFAVDCFQAGETDLLLATFAA 368 Query: 119 CGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDE 178 G G L + +V W + R + G + + ++L D+ Sbjct: 369 GGLGFTLHRSQD-VVLLERPWTPGDID-----QAEDRCHRIGMEGGLTSHWLQL-GLADQ 421 Query: 179 LVLQRLRTKSTIQDLLLN 196 LV + +K+ +LLL Sbjct: 422 LVDGLVASKAERIELLLG 439 >gi|331000034|ref|ZP_08323730.1| protein, SNF2 family [Parasutterella excrementihominis YIT 11859] gi|329573182|gb|EGG54799.1| protein, SNF2 family [Parasutterella excrementihominis YIT 11859] Length = 1183 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 11/39 (28%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGA 39 + Y + LQ E I + K Q A Sbjct: 1143 LAIYENIRTRTLSGLQSEKINPIEALMALTKLRQAACSP 1181 >gi|156539035|ref|XP_001599281.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1, partial [Nasonia vitripennis] Length = 224 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 43/143 (30%), Gaps = 2/143 (1%) Query: 9 RELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANA 68 +E+ + ++ A K LQ + + E+ V D + +I + Sbjct: 83 KEMEAASKEMQKKSLTGAQKHGALLQYYSESSKAKEKAVCNYVTDLIENQQKFLIFAHHK 142 Query: 69 APIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ-EWNEGKIPLLFAHPASCGHGLNLQY 127 + + + L ++ + + + + G+ L Sbjct: 143 NMMDAISNLLTSKKVLFIRIDGKTHPEQRKQFVDTFQQNENVLVAVLSITAANAGITLTA 202 Query: 128 GGNILVFFSLWWDLEEHQQMIER 150 ++VF L W+ Q +R Sbjct: 203 -AQLVVFAELSWNPGILCQAEDR 224 >gi|269137964|ref|YP_003294664.1| ATP-dependent helicase HepA [Edwardsiella tarda EIB202] gi|267983624|gb|ACY83453.1| ATP-dependent helicase HepA [Edwardsiella tarda EIB202] gi|304558012|gb|ADM40676.1| RNA polymerase associated protein RapA [Edwardsiella tarda FL6-60] Length = 968 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 9/90 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G +L + + E +L G N Q+ N LV F L ++ + + Sbjct: 534 FHEGMSLIERDRAAAYFASQEEGAQVLLCS-EIGSEGRNFQF-ANRLVMFDLPFNPDLLE 591 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 Q I R+ + G R + +Y + T Sbjct: 592 QRIGRLD-----RIGQARDIQIYVPCLEGT 616 >gi|256842520|ref|ZP_05548022.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298374900|ref|ZP_06984857.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] gi|301308009|ref|ZP_07213963.1| conserved hypothetical protein [Bacteroides sp. 20_3] gi|256735876|gb|EEU49208.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298267400|gb|EFI09056.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] gi|300833479|gb|EFK64095.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 1000 Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 59/190 (31%), Gaps = 18/190 (9%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 +A + +K L A + E + + K + +E ++ K + Sbjct: 771 GDAKKDAGLRLMRQIKLLIKACSVPHLIEGYSGDGIPN-KTRYIERLVRKIPGKVAVGCT 829 Query: 76 HF-----------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 R K + E++ +L S +N Sbjct: 830 SIAAFDLYESRLRECFPDRPVFVVKGDVAFKKRQSIVTEFDSTINGILVCTQQSLSSSVN 889 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 + ++++ W + Q R + K V+Y+ ++++++ ++ + Sbjct: 890 IPTCNDVILESLQWNIPKMEQFY------FRFIRLDSKELKDVHYVTYKDSVEQNLMALV 943 Query: 185 RTKSTIQDLL 194 TK + + + Sbjct: 944 LTKERLNEFI 953 >gi|255015071|ref|ZP_05287197.1| putative helicase [Bacteroides sp. 2_1_7] Length = 1000 Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 59/190 (31%), Gaps = 18/190 (9%) Query: 16 QGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY 75 +A + +K L A + E + + K + +E ++ K + Sbjct: 771 GDAKKDAGLRLMRQIKLLIKACSVPHLIEGYSGDGIPN-KTRYIERLVRKIPGKVAVGCT 829 Query: 76 HF-----------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLN 124 R K + E++ +L S +N Sbjct: 830 SIAAFDLYESRLRECFPDRPVFVVKGDVAFKKRQSIVTEFDSTINGILVCTQQSLSSSVN 889 Query: 125 LQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRL 184 + ++++ W + Q R + K V+Y+ ++++++ ++ + Sbjct: 890 IPTCNDVILESLQWNIPKMEQFY------FRFIRLDSKELKDVHYVTYKDSVEQNLMALV 943 Query: 185 RTKSTIQDLL 194 TK + + + Sbjct: 944 LTKERLNEFI 953 >gi|330831287|ref|YP_004394239.1| RNA polymerase-associated protein rapA [Aeromonas veronii B565] gi|328806423|gb|AEB51622.1| RNA polymerase-associated protein rapA [Aeromonas veronii B565] Length = 927 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 8/124 (6%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE-WNEGKIPL 111 + + + VI +A A + + R L++D + EG + Sbjct: 460 SARQQKVLVICSEAATAIALEEALRTREGIRGAVFHEGMSILERDKASAYFAQQEGGAQV 519 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G N Q+ + LV F L + + +Q I R+ + G + V ++ Sbjct: 520 LLCS-EIGSEGRNFQF-ASHLVLFDLPLNPDLLEQRIGRLD-----RIGQQNTVEIHVPY 572 Query: 172 AQNT 175 + T Sbjct: 573 LEGT 576 >gi|257456998|ref|ZP_05622179.1| ATP-dependent rRNA helicase RRP3 [Treponema vincentii ATCC 35580] gi|257445707|gb|EEV20769.1| ATP-dependent rRNA helicase RRP3 [Treponema vincentii ATCC 35580] Length = 434 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 29/95 (30%), Gaps = 11/95 (11%) Query: 96 KDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTR 155 + I + GK +L +L G + ++ + I Sbjct: 332 ERKQIIARFRSGKTRILITS--------DLSARGLDIADIDYIVQMQLSKDADAFIHRAG 383 Query: 156 QRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + K+ V + + + + +LQ L K I Sbjct: 384 RTGRAGKKGVNI---VIGDEYELRILQALEKKLGI 415 >gi|172039355|ref|YP_001805856.1| DNA repair helicase [Cyanothece sp. ATCC 51142] gi|171700809|gb|ACB53790.1| probable DNA repair helicase [Cyanothece sp. ATCC 51142] Length = 493 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 51/150 (34%), Gaps = 10/150 (6%) Query: 42 YDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYH-----FNSDLARLQKAFPQGRTLDK 96 + E K + K++ L ++ + + +++ + + L A + + Sbjct: 310 HREAKEIAAGTEGKLRVLAELVCEHHQDSLLIFTNDNATVYRISQEFLIPAITHQTPVKE 369 Query: 97 DPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQ 156 + + EG L + + ++R+G + Sbjct: 370 RHDILTRFREGIYKSLVTSHVLNEGV---DVPEVKVAIIISGTSSAR--EYVQRLGRILR 424 Query: 157 RQAGFKRAVFVYYLIAQNTIDELVLQRLRT 186 + G + +Y ++A++T +E + QR + Sbjct: 425 KGKGKNKLATLYEIVAEDTSEERISQRRKE 454 >gi|253682914|ref|ZP_04863701.1| putative helicase [Clostridium phage D-1873] gi|253560840|gb|EES90302.1| putative helicase [Clostridium phage D-1873] Length = 879 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 21/178 (11%), Positives = 49/178 (27%), Gaps = 16/178 (8%) Query: 23 FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAY------- 75 + L + Y E H + + K + I Sbjct: 658 MEIIQQITLLLNICQHPQTYREYNHLETPNKYKKVIELLNKWNDEQVSIGCRSLKEINCY 717 Query: 76 ---HFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNIL 132 + R ++++ I+E K +L S ++ N + Sbjct: 718 TLLIKKNFPNRKLFIITGSISMERRREIIKELKNYKNGILLCTQQSLSSSIS-IDYINKI 776 Query: 133 VFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTI 190 + +L W+ Q R Q ++++ N+++ +L + K + Sbjct: 777 IITALSWNFSSLSQFFFRFIRYTSTQHK-----EIHFITYANSLESNLLGLIMAKENL 829 >gi|17553716|ref|NP_498514.1| hypothetical protein F57B9.3 [Caenorhabditis elegans] gi|532817|gb|AAA21169.1| Hypothetical protein F57B9.3 [Caenorhabditis elegans] Length = 363 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 7/119 (5%), Positives = 35/119 (29%), Gaps = 13/119 (10%) Query: 43 DEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNS----------DLARLQKAFPQGR 92 + + + K L +++ + ++ + + F Sbjct: 202 RQFYINVQKDEWKFNCLCDLLKTSRETQALIFCNTRRRVTQLTEQLMSIPIKVSCFHGNM 261 Query: 93 TLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 ++ ++++N +L + ++++ + + ++E + R Sbjct: 262 EHNEREDMVKDFNSRNTRVLVTTDLMAR---GMNIRKSLIINYDVSGNMENYMLRNGRQ 317 >gi|170039498|ref|XP_001847570.1| transcription termination factor 2 [Culex quinquefasciatus] gi|167863047|gb|EDS26430.1| transcription termination factor 2 [Culex quinquefasciatus] Length = 989 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 3/60 (5%), Positives = 17/60 (28%), Gaps = 6/60 (10%) Query: 17 GENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH------DEKIKALEVIIEKANAAP 70 ++++ ++ Q+ + E + + + ++ + N Sbjct: 801 KDDVKQHEILVLLLRLRQICCHPGLIHKMLDDDEGNFHDVSGNNEEAPELDLLAQLNNLK 860 >gi|327310558|ref|YP_004337455.1| type III restriction enzyme, res subunit [Thermoproteus uzoniensis 768-20] gi|326947037|gb|AEA12143.1| type III restriction enzyme, res subunit [Thermoproteus uzoniensis 768-20] Length = 651 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 53/159 (33%), Gaps = 20/159 (12%) Query: 53 DEKIKALEVIIEKAN--AAPIIVAYHF------NSDLARLQKAFPQGRTLDKDPCTIQE- 103 KI I+++ ++V F D R + + T ++ + Sbjct: 482 SSKIPIAVEIVKREVALGHKVLVFTQFLEQAKAVYDKLREESIRSELITSEERDRSSAFS 541 Query: 104 -WNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G ++ ++ V S + Q + R+ +A K Sbjct: 542 RFLSGAAKVVVTTTVL--DEGVDVPDADVAVIVSGSGSKRQMLQRVGRVVR----RAPGK 595 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 VY LIA+ TI+E L + D++ ++ ++ Sbjct: 596 SVARVYELIARGTIEE----ALSESRHVDDVIEESVCRK 630 >gi|149190305|ref|ZP_01868579.1| ATP-dependent helicase HepA [Vibrio shilonii AK1] gi|148835912|gb|EDL52875.1| ATP-dependent helicase HepA [Vibrio shilonii AK1] Length = 969 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 9/90 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + EG +L G N Q+ N LV F L ++ + + Sbjct: 536 FHEGMSILERDKAAAYFAQEEGGAQVLICS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLE 593 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 Q I R+ + G KR + V+ +NT Sbjct: 594 QRIGRLD-----RIGQKRDIDVHVPYLENT 618 >gi|325913813|ref|ZP_08176172.1| DNA/RNA helicase, superfamily II [Xanthomonas vesicatoria ATCC 35937] gi|325539888|gb|EGD11525.1| DNA/RNA helicase, superfamily II [Xanthomonas vesicatoria ATCC 35937] Length = 570 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 61/192 (31%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E I A + Q + + +EK L + Sbjct: 210 AYEHMNEPEKLVVETETITAA-------RVRQ-----------RIYFPSDEEKQTLLLGL 251 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + + + R+ + + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKAFVERVARTLERNGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|294634981|ref|ZP_06713498.1| RNA polymerase-associated protein RapA [Edwardsiella tarda ATCC 23685] gi|291091580|gb|EFE24141.1| RNA polymerase-associated protein RapA [Edwardsiella tarda ATCC 23685] Length = 968 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G +L + + E +L G N Q+ N LV F L ++ + + Sbjct: 534 FHEGMSLIERDRAAAYFASQEEGAQVLLCS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLE 591 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 Q I R+ + G R + +Y +NT Sbjct: 592 QRIGRLD-----RIGQARDIQIYVPCLENT 616 >gi|225389883|ref|ZP_03759607.1| hypothetical protein CLOSTASPAR_03632 [Clostridium asparagiforme DSM 15981] gi|225044076|gb|EEG54322.1| hypothetical protein CLOSTASPAR_03632 [Clostridium asparagiforme DSM 15981] Length = 1081 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 10/36 (27%) Query: 12 YCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKH 47 + +G E F + + Q+ E Sbjct: 841 RSEGEGLGEERFQVLADLTRLRQICCDPRLCYENYK 876 >gi|325297384|ref|YP_004257301.1| DEAD/DEAH box helicase domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324316937|gb|ADY34828.1| DEAD/DEAH box helicase domain protein [Bacteroides salanitronis DSM 18170] Length = 439 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 52/173 (30%), Gaps = 17/173 (9%) Query: 8 QRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVH--DEKIKALEVIIEK 65 +R L E I F + K L V +K V +K+ L ++ Sbjct: 166 RRFLLSATDAEEIPRFTGLRRVRKLDFLRPEHVLSSRLHLYKVVSPVKDKLDTLFRLLCC 225 Query: 66 ANAAPIIVAYHFNSDLAR----------LQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAH 115 +V + + R + F G D+ + ++ G P+L Sbjct: 226 IGNESTLVFCNHRESVERVGEYLRRMKMYCEVFHGGMGQDERERALYKFRNGSCPVLV-S 284 Query: 116 PASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVY 168 GL++ N++ + I R G T + + V Y Sbjct: 285 TDLAARGLDIPEIKNVVHY----HLPVSEDSFIHRNGRTARWENEGNAYVLAY 333 >gi|145300304|ref|YP_001143145.1| ATP-dependent helicase HepA [Aeromonas salmonicida subsp. salmonicida A449] gi|189029409|sp|A4SR75|RAPA_AERS4 RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|142853076|gb|ABO91397.1| RNA polymerase associated protein RapA [Aeromonas salmonicida subsp. salmonicida A449] Length = 955 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 8/124 (6%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQE-WNEGKIPL 111 + + + VI +A A + + R L++D + +G + Sbjct: 488 SARQQKVLVICSEAATAIALEEALRTREGIRGTVFHEGMSILERDKASAYFAQEDGGAQV 547 Query: 112 LFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLI 171 L G N Q+ + LV F L + + +Q I R+ + G + V ++ Sbjct: 548 LLCS-EIGSEGRNFQF-ASHLVLFDLPLNPDLLEQRIGRLD-----RIGQQNTVEIHVPY 600 Query: 172 AQNT 175 + T Sbjct: 601 LEGT 604 >gi|90580792|ref|ZP_01236595.1| ATP-dependent helicase HepA [Vibrio angustum S14] gi|90438060|gb|EAS63248.1| ATP-dependent helicase HepA [Vibrio angustum S14] Length = 972 Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 20/137 (14%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYH-----------FNSDLARLQKAFPQGRTLDKDPCT 100 D ++ L +++ ++V F +G ++ + Sbjct: 490 FDPRVNWLLDMLKANRNEKVLVICSRAQTALTLEQALREREGIRATVFHEGMSIIERDKA 549 Query: 101 IQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + +L G N Q+ N LV F L + + +Q I R+ + Sbjct: 550 AAYFAQEDDGAQVLLCS-EIGSEGRNFQF-ANQLVMFDLPSNPDLLEQRIGRLD-----R 602 Query: 159 AGFKRAVFVYYLIAQNT 175 G KR + ++ + T Sbjct: 603 IGQKREIEIHVPYLEGT 619 >gi|166710445|ref|ZP_02241652.1| ATP-dependent RNA helicase RhlB [Xanthomonas oryzae pv. oryzicola BLS256] Length = 574 Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 61/192 (31%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E I A + Q + + +EK L + Sbjct: 210 AYEHMNEPEKLVVETETITAA-------RVRQ-----------RIYFPSDEEKQTLLLGL 251 Query: 63 IEKANAAPIIVAYH---FNSDLARLQKAFPQ-------GRTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + F +AR+ + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKVFVERVARILERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|307106391|gb|EFN54637.1| hypothetical protein CHLNCDRAFT_9749 [Chlorella variabilis] Length = 370 Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 16/145 (11%), Positives = 38/145 (26%), Gaps = 23/145 (15%) Query: 7 FQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDE--------EKHWKEVHDEKIKA 58 + + +E + + N + K+ Sbjct: 226 MKDGAALAHMEKEVEG-KLMMLVQQLRKCCNHPYLFPGSEPDFDGRTGEDIVHASGKMDV 284 Query: 59 LEVIIEKAN--AAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPCTIQEWNE 106 L+ +++K +++ FN L L+ + I+ +N Sbjct: 285 LDRLLKKLKRRGHRVVLFSQFNMQLDILEDFMNMRGYKYSRLDGTTNRVQRMIDIKLFNR 344 Query: 107 GKIP--LLFAHPASCGHGLNLQYGG 129 + + + G G+NLQ Sbjct: 345 PGSDTFVYLLNTRAGGLGVNLQTAD 369 >gi|302557430|ref|ZP_07309772.1| SNF2/helicase domain-containing protein [Streptomyces griseoflavus Tu4000] gi|302475048|gb|EFL38141.1| SNF2/helicase domain-containing protein [Streptomyces griseoflavus Tu4000] Length = 363 Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 8/42 (19%), Gaps = 2/42 (4%) Query: 3 QYHKFQRELYCDLQ--GENIEAFNSASKTVKCLQLANGAVYY 42 Y RE + Q+ + Y Sbjct: 264 LYEAVVRESMAAIGTARGMGRRGLVLKLLTSLKQICDHPALY 305 >gi|302885039|ref|XP_003041413.1| hypothetical protein NECHADRAFT_87952 [Nectria haematococca mpVI 77-13-4] gi|256722314|gb|EEU35700.1| hypothetical protein NECHADRAFT_87952 [Nectria haematococca mpVI 77-13-4] Length = 1138 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 31/95 (32%), Gaps = 7/95 (7%) Query: 78 NSDLARLQKAFPQGRTLDKDPCTIQEWNEG--KIPLLFAHPASCGHGLNLQYGGNILVFF 135 + + A+ Q I++W++ + A+ G+N+ + F Sbjct: 798 KRIMFYVDTAWIQQDKASHRNRVIRDWSDPSTDCEIFIANINITATGVNMHGACSTGAFL 857 Query: 136 SLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 + + Q + R + G + V + L Sbjct: 858 CWHLNFQVMQ-----QAMARLNRIGQREPVDWWLL 887 >gi|320155233|ref|YP_004187612.1| RNA polymerase associated protein RapA [Vibrio vulnificus MO6-24/O] gi|319930545|gb|ADV85409.1| RNA polymerase associated protein RapA [Vibrio vulnificus MO6-24/O] Length = 969 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 10/98 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + EG +L G N Q+ N LV F L ++ + + Sbjct: 536 FHEGMSILERDKAAAYFAQEEGGAQVLICS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLE 593 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 Q I R+ + G KR + ++ Q T E VL R Sbjct: 594 QRIGRLD-----RIGQKRDIDIHVPYLQGTAQE-VLAR 625 >gi|27364844|ref|NP_760372.1| ATP-dependent helicase HepA [Vibrio vulnificus CMCP6] gi|41017731|sp|Q8DCG1|RAPA_VIBVU RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|27360989|gb|AAO09899.1| RNA polymerase associated protein rapA [Vibrio vulnificus CMCP6] Length = 969 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 10/98 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + EG +L G N Q+ N LV F L ++ + + Sbjct: 536 FHEGMSILERDKAAAYFAQEEGGAQVLICS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLE 593 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 Q I R+ + G KR + ++ Q T E VL R Sbjct: 594 QRIGRLD-----RIGQKRDIDIHVPYLQGTAQE-VLAR 625 >gi|89075566|ref|ZP_01161971.1| ATP-dependent helicase HepA [Photobacterium sp. SKA34] gi|89048706|gb|EAR54278.1| ATP-dependent helicase HepA [Photobacterium sp. SKA34] Length = 972 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 20/137 (14%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYH-----------FNSDLARLQKAFPQGRTLDKDPCT 100 D ++ L +++ ++V F +G ++ + Sbjct: 490 FDPRVNWLLDMLKANRNEKVLVICSRAQTALTLEQALREREGIRATVFHEGMSIIERDKA 549 Query: 101 IQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + +L G N Q+ N LV F L + + +Q I R+ + Sbjct: 550 AAYFAQEDDGAQVLLCS-EIGSEGRNFQF-ANQLVMFDLPSNPDLLEQRIGRLD-----R 602 Query: 159 AGFKRAVFVYYLIAQNT 175 G KR + ++ + T Sbjct: 603 IGQKREIEIHVPYLEGT 619 >gi|326471360|gb|EGD95369.1| hypothetical protein TESG_02855 [Trichophyton tonsurans CBS 112818] Length = 1144 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 8/122 (6%) Query: 56 IKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNE--GKIPLLF 113 ++ +++I A ++ L ++ G + ++ K +L Sbjct: 940 LRKEKLLIFVTMPAQVLWLESVLQLLDLDAHSYRAGLNVQDRQILADTFHRSPDKCYILI 999 Query: 114 AHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQ 173 C GLNLQ LVF+ +E+ + R ++ G + + ++ L + Sbjct: 1000 TSFWVCCTGLNLQGHCRNLVFWDSAPI------SVEQQALGRLKRVGATKTIRLFRLYVE 1053 Query: 174 NT 175 NT Sbjct: 1054 NT 1055 >gi|325928804|ref|ZP_08189971.1| DNA/RNA helicase, superfamily II [Xanthomonas perforans 91-118] gi|325540777|gb|EGD12352.1| DNA/RNA helicase, superfamily II [Xanthomonas perforans 91-118] Length = 571 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 62/192 (32%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E+I A + Q + + +EK L + Sbjct: 210 AYEHMNEPEKLVVETESITAA-------RVRQ-----------RIYFPSDEEKQTLLLGL 251 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + + + R+ + + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|294665093|ref|ZP_06730397.1| ATP-dependent RNA helicase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605135|gb|EFF48482.1| ATP-dependent RNA helicase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 570 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 62/192 (32%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E+I A + Q + + +EK L + Sbjct: 210 AYEHMNEPEKLVVETESITAA-------RVRQ-----------RIYFPSDEEKQTLLLGL 251 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + + + R+ + + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|294626526|ref|ZP_06705125.1| ATP-dependent RNA helicase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599216|gb|EFF43354.1| ATP-dependent RNA helicase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 570 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 62/192 (32%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E+I A + Q + + +EK L + Sbjct: 210 AYEHMNEPEKLVVETESITAA-------RVRQ-----------RIYFPSDEEKQTLLLGL 251 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + + + R+ + + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|292653988|ref|YP_003533886.1| DNA repair helicase Rad25 [Haloferax volcanii DS2] gi|291369858|gb|ADE02086.1| DNA repair helicase Rad25 [Haloferax volcanii DS2] Length = 466 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 54/139 (38%), Gaps = 11/139 (7%) Query: 53 DEKIKALEVIIEKANAAPIIVAY---HFNSDLARL--QKAFPQGRTLDKDPCTIQEWNEG 107 +K+ L+ +I++ + I+ F ++++ D+ ++ + G Sbjct: 330 TKKLDTLDNLIKRHHDDRAIIFTANNDFAYEISQEFIVPCITHQTKTDERTEILERFRTG 389 Query: 108 KIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFV 167 + + A G++ N+ + S ++ Q + RI + + + Sbjct: 390 EYS-MLATSQVLDEGID-VPAANVGIILSGSASKRQYAQRLGRILRPTDDR----QPARL 443 Query: 168 YYLIAQNTIDELVLQRLRT 186 Y +I ++T++ V QR R Sbjct: 444 YEIITEDTMETYVSQRRRE 462 >gi|78049510|ref|YP_365685.1| ATP-dependent RNA helicase RhlB [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123584009|sp|Q3BNH8|RHLB_XANC5 RecName: Full=ATP-dependent RNA helicase rhlB gi|78037940|emb|CAJ25685.1| ATP-dependent RNA helicase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 573 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 62/192 (32%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E+I A + Q + + +EK L + Sbjct: 210 AYEHMNEPEKLVVETESITAA-------RVRQ-----------RIYFPSDEEKQTLLLGL 251 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + + + R+ + + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|21244553|ref|NP_644135.1| ATP-dependent RNA helicase RhlB [Xanthomonas axonopodis pv. citri str. 306] gi|32363346|sp|Q8PFZ3|RHLB_XANAC RecName: Full=ATP-dependent RNA helicase rhlB gi|21110227|gb|AAM38671.1| ATP-dependent RNA helicase [Xanthomonas axonopodis pv. citri str. 306] Length = 571 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 62/192 (32%), Gaps = 31/192 (16%) Query: 3 QYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALEVI 62 Y ++ E+I A + Q + + +EK L + Sbjct: 210 AYEHMNEPEKLVVETESITAA-------RVRQ-----------RIYFPSDEEKQTLLLGL 251 Query: 63 IEKANAAPIIVAYHFNSDLARLQKAFPQG----------RTLDKDPCTIQEWNEGKIPLL 112 + ++ A +V + + + R+ + + K + + +G++ +L Sbjct: 252 LSRSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEIL 311 Query: 113 FAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIA 172 A + G + + L +D E++ I R + A Y + Sbjct: 312 VATDVAARGLHI--DGVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISFACERYAMSL 369 Query: 173 QNTIDELVLQRL 184 + I+ + Q++ Sbjct: 370 PD-IEAYIEQKI 380 >gi|330834348|ref|YP_004409076.1| DNA repair helicase RAD25 [Metallosphaera cuprina Ar-4] gi|329566487|gb|AEB94592.1| DNA repair helicase RAD25 [Metallosphaera cuprina Ar-4] Length = 538 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 51/144 (35%), Gaps = 11/144 (7%) Query: 40 VYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAF-----PQGRTL 94 Y+ K + K+ ++ I+E+ II+ + + + + Sbjct: 379 RVYNAMNMIKGLTKGKLVKIKEIVERERDKKIIIFTQYVEHANEIARLTGAKLLTGQMSK 438 Query: 95 DKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVT 154 + T+ E+ K +L L + +Q ++R+G Sbjct: 439 KERDLTLDEFKNQKSGVLVLTTV---GDEGLDIPDASVGILVAGTS--SRRQYVQRLGRL 493 Query: 155 RQRQAGFKRAVFVYYLIAQNTIDE 178 + +G K AV +Y LIA+ T +E Sbjct: 494 LRNNSGGKVAV-LYELIAKGTSEE 516 >gi|123296350|emb|CAM28175.1| transcription termination factor, RNA polymerase II [Mus musculus] Length = 956 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 4/68 (5%), Positives = 12/68 (17%), Gaps = 11/68 (16%) Query: 21 EAFNSASKTVKCLQLANGAVYYDEEKHWKEV-----------HDEKIKALEVIIEKANAA 69 + S+ ++ Q + V K ++ Sbjct: 889 STVHVLSQLLRLRQCCCHLSLLKSVRDAPSVVISTVGCSRDPASGKRLVCSSLLWDGEET 948 Query: 70 PIIVAYHF 77 + Sbjct: 949 HFFCFTLY 956 >gi|37681109|ref|NP_935718.1| ATP-dependent helicase HepA [Vibrio vulnificus YJ016] gi|41017628|sp|Q7MHE6|RAPA_VIBVY RecName: Full=RNA polymerase-associated protein rapA; AltName: Full=ATP-dependent helicase hepA gi|37199859|dbj|BAC95689.1| RNA polymerase-associated protein HepA [Vibrio vulnificus YJ016] Length = 969 Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 10/98 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + EG +L G N Q+ N LV F L ++ + + Sbjct: 536 FHEGMSILERDKAAAYFAQEEGGAQVLICS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLE 593 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQR 183 Q I R+ + G KR + ++ Q T E VL R Sbjct: 594 QRIGRLD-----RIGQKRDIDIHVPYLQGTAQE-VLAR 625 >gi|154493718|ref|ZP_02033038.1| hypothetical protein PARMER_03059 [Parabacteroides merdae ATCC 43184] gi|154086928|gb|EDN85973.1| hypothetical protein PARMER_03059 [Parabacteroides merdae ATCC 43184] Length = 436 Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 42/138 (30%), Gaps = 18/138 (13%) Query: 53 DEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKA----------FPQGRTLDKDPCTIQ 102 +K++ L ++ + ++ ++ + R+ F G + + Sbjct: 214 KDKLETLYKLLGELKGGSALIFCNYRETVERVSNYLTEMGVDNEYFHGGMEQPERERALS 273 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 + G + GL++ N ++ + L E + R Sbjct: 274 HFRNGSATVFI-STDLASRGLDIPEVKN-VIHYHLPVSEEAYVHRNGRTARMNA------ 325 Query: 163 RAVFVYYLIAQNTIDELV 180 V L A+ TI E + Sbjct: 326 EGVAYLILNAEETIPEYI 343 >gi|302822220|ref|XP_002992769.1| hypothetical protein SELMODRAFT_448890 [Selaginella moellendorffii] gi|300139414|gb|EFJ06155.1| hypothetical protein SELMODRAFT_448890 [Selaginella moellendorffii] Length = 592 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 14/36 (38%) Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKST 189 + G + V + I ++++ E + Q K Sbjct: 17 CGRSSIGQTKNVSIKRFIVKDSVGERMQQVQARKQR 52 >gi|26343661|dbj|BAC35487.1| unnamed protein product [Mus musculus] Length = 651 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 53/164 (32%), Gaps = 18/164 (10%) Query: 44 EEKHWKEVHDEKIKALEVI-IEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQ 102 + + ++E I P+I F +G T + ++ Sbjct: 459 CHESRVMIFSSFRDSVEEIAEMLLQHRPVIRVMTFV---GHASGKNTKGFTQKEQLQVVR 515 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 ++ +G L GL++ ++++ F Q + R G RQ + Sbjct: 516 QFRDGGYNTLV-STCVGEEGLDI-GEVDLIICFDAQKSPIRLIQRMGRTGRKRQGR---- 569 Query: 163 RAVFVYYLIAQNTIDELVL-QRLRTKSTIQDLLLNALKKETIHV 205 + ++A+ +E Q K I + + ++ + + Sbjct: 570 ----IVVILAEG-REERTYNQSQSNKKNIYKAI--SGNRQVLRL 606 >gi|238801686|ref|YP_002922742.1| gp70 [Burkholderia phage BcepIL02] gi|237688061|gb|ACR15063.1| gp70 [Burkholderia phage BcepIL02] Length = 4667 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 31/111 (27%), Gaps = 5/111 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + K + EGK +L G+N+Q W +Q Sbjct: 2929 FMRDNKEHAKKERLFADMREGKKRVLIG-GKDMETGVNVQKRLYTEEHLDAPWFPASVEQ 2987 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V + + + D + K+ + LN Sbjct: 2988 REGRIIR----QGNQNKQVRIRAWATKGSYDSTMWGMNARKARFIEQALNG 3034 >gi|224499222|ref|ZP_03667571.1| SNF2 family helicase [Listeria monocytogenes Finland 1988] Length = 54 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 14/27 (51%) Query: 170 LIAQNTIDELVLQRLRTKSTIQDLLLN 196 +I + TI+E + + K + D L+ Sbjct: 1 MITKGTIEERIFDLQKKKQALVDELIQ 27 >gi|119571323|gb|EAW50938.1| chromodomain helicase DNA binding protein 1-like, isoform CRA_c [Homo sapiens] Length = 445 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 12/154 (7%), Positives = 34/154 (22%), Gaps = 35/154 (22%) Query: 2 KQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYY-------DEEKHWKEVHDE 54 K Y + + E + + + + + + E Sbjct: 288 KYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASG 347 Query: 55 KIKALEVIIE--KANAAPIIVAYHFNSDLARLQKAFPQGRTLDK---------------- 96 K+ L+ ++ + +++ L LQ L + Sbjct: 348 KLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRDYLKRVKISVFLPLCKGYSYE 407 Query: 97 ----------DPCTIQEWNEGKIPLLFAHPASCG 120 I+ + + I + + Sbjct: 408 RVDGSVRGEERHLAIKNFGQQPIFVFLLSTRAGR 441 >gi|328949357|ref|YP_004366694.1| helicase [Treponema succinifaciens DSM 2489] gi|328449681|gb|AEB15397.1| helicase domain protein [Treponema succinifaciens DSM 2489] Length = 595 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 12/129 (9%) Query: 55 KIKALEVIIEKANAAPIIVAYHFNSDLARL-----QKAFPQGRTLDKDPCTIQEWNEGKI 109 K K ++ ++EK I++ F + L + + ++ GKI Sbjct: 432 KNKIVQELVEKFKDDKILIIGQFLTHLEIIAKLLNVPIITGKTKNSERDIIYDDFRSGKI 491 Query: 110 PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYY 169 +L ++L + + +E Q + RI +R + Sbjct: 492 RVLVVS-KVANFAIDLPDASVAIQVSGTFGSRQEEAQRLGRILR------PKERTSRFFT 544 Query: 170 LIAQNTIDE 178 LI + T++E Sbjct: 545 LITRGTVEE 553 >gi|10719930|sp|P57092|C18CA_PAEPP RecName: Full=Parasporal crystal protein cry18Ca; AltName: Full=78 kDa crystal protein; AltName: Full=Crystaline parasporal protoxin; AltName: Full=Parasporal delta-endotoxin CryXVIIIC(a) gi|9622200|gb|AAF89668.1|AF169251_1 parasporal crystal protein Cry18Ca1 [Paenibacillus popilliae] Length = 695 Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 31/99 (31%), Gaps = 9/99 (9%) Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER-----IGVTRQR 157 ++ +L + L+L + +I++ W E +R + Sbjct: 207 QFQVSDDQVLLLPLFAQAVTLHLTFVRDIIINADEWNIPEAQLNTYKRYLKQYVAQYSNY 266 Query: 158 QAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLN 196 F +NT++ L K+ + +L+ Sbjct: 267 ALSTYEEAFRARFYPRNTVE----NMLEFKTFMTLNVLD 301 >gi|305663150|ref|YP_003859438.1| helicase domain protein [Ignisphaera aggregans DSM 17230] gi|304377719|gb|ADM27558.1| helicase domain protein [Ignisphaera aggregans DSM 17230] Length = 1004 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 7/117 (5%) Query: 83 RLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLE 142 R++ + R + +G+I + GLNLQ NI++ + W Sbjct: 467 RIEIPGWRERRNPDIEDLKKYLGQGRIKV-VISTDVASEGLNLQ-VANIIINYEPTWSPI 524 Query: 143 EHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 + +Q + R+ + G +R V Y + D+ VL L K L K Sbjct: 525 KIEQRLGRVW-----RLGQERDVTSYTIFLDIRSDKDVLDILYKKLLALGRSLQESK 576 >gi|242398676|ref|YP_002994100.1| ATP-dependent RNA helicase, putative [Thermococcus sibiricus MM 739] gi|242265069|gb|ACS89751.1| ATP-dependent RNA helicase, putative [Thermococcus sibiricus MM 739] Length = 772 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 77/217 (35%), Gaps = 31/217 (14%) Query: 1 MKQYHKFQRELYCDLQGENIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEKIKALE 60 ++ Y ++LY + + ++ + + + V E D+ + + Sbjct: 297 LRAY---LKKLYEESKKGRAKSTKELIQDPRMKKAVALLVQAKELGLDHPKLDKLKELIR 353 Query: 61 VIIEKANAAPIIVAYHFNSD------------------LARLQKAFPQGRTLDKDPCTIQ 102 ++K ++ IIV ++ + + K +G + K + Sbjct: 354 SQLKKKPSSKIIVFTNYRETAKKIVKELLEDHIKAVRFVGQASKENDKGLSQKKQKQVLN 413 Query: 103 EWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK 162 +++G+ +L A + GL++ ++++F+ Q R G + + Sbjct: 414 LFSQGEFNVLVAT-SVGEEGLDVPEV-DLVIFYEPVPSAIRSIQRKGRTGRHKPGR---- 467 Query: 163 RAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 V L+A+ T DE+ R K +L ++ Sbjct: 468 ----VVILMAKGTRDEIYYWSSRHKEKQMISILEKVE 500 >gi|212693469|ref|ZP_03301597.1| hypothetical protein BACDOR_02986 [Bacteroides dorei DSM 17855] gi|212663982|gb|EEB24556.1| hypothetical protein BACDOR_02986 [Bacteroides dorei DSM 17855] Length = 1000 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 71/215 (33%), Gaps = 21/215 (9%) Query: 5 HKFQRELYCDLQGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVHDEKIKALEV 61 +F R ++ + ++ ++L A + E + + K + +E Sbjct: 757 EEFCRICELYYNSTGDTRKDAGLRLMRQIKLLIKACSVPHLIEGYRGDGIPN-KTRYIER 815 Query: 62 IIEKANAAPIIVAYHF-----------NSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP 110 +I + + R K + E++ Sbjct: 816 LIRRIPGKVAVGCTSIASFDLYESHLRERFPERPLFVVKGDVAFKKRQGIVTEFDSTVNG 875 Query: 111 LLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYL 170 +L S +N+ N ++ SL W++ + +Q R + V+Y+ Sbjct: 876 ILVCTQQSLSSSVNIPT-CNDVILESLQWNIPKMEQFYFRFIRLDSKDLKD-----VHYV 929 Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKETIHV 205 ++++++ ++ + TK + + + + KE + Sbjct: 930 TYKDSVEQNLMALVLTKERLNEFIKSGEVKEQSEI 964 >gi|38640380|ref|NP_944303.1| Bcep22gp75 [Burkholderia phage Bcep22] gi|33860447|gb|AAQ55007.1| Bcep22gp75 [Burkholderia phage Bcep22] Length = 4602 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 31/111 (27%), Gaps = 5/111 (4%) Query: 87 AFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQ 146 + K + EGK +L G+N+Q W +Q Sbjct: 2829 FMRDNKEHAKKERLFADMREGKKRVLIG-GKDMETGVNVQKRLYSEEHLDAPWFPASVEQ 2887 Query: 147 MIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNA 197 RI Q + V + + + D + K+ + LN Sbjct: 2888 REGRIIR----QGNQNKQVRIRAWATKGSYDSTMWGMNARKARFIEQALNG 2934 >gi|52842509|ref|YP_096308.1| ATP-dependent helicase HepA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629620|gb|AAU28361.1| ATP-dependent RNA helicase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 958 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G T+ + + E +L G N Q+ + LV F L + + + Sbjct: 522 FHEGLTIIERDRAAAYFAEQENGAQVLVCS-EIGSEGRNFQF-SHHLVLFDLPLNPDLLE 579 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 Q I R+ + G + ++ T E + + Sbjct: 580 QRIGRLD-----RIGQNHPIEIHVPYLAGTAQEKLFR 611 >gi|323446767|gb|EGB02816.1| hypothetical protein AURANDRAFT_4085 [Aureococcus anophagefferens] Length = 308 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 12/109 (11%), Positives = 35/109 (32%), Gaps = 22/109 (20%) Query: 1 MKQY---HKFQRELYCDLQGENIEAFNSA---------SKTVKCLQLANGAVYY------ 42 +K Y + QR Y + ++ N+ + ++ ++ N + Sbjct: 200 VKLYIGMTEMQRLWYTKILSKDAHTLNALGGPDRVQLLNILMQLRKVCNHPYLFEGAEPG 259 Query: 43 --DEEKHWKEVHDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKA 87 + + K+ + ++ K A + +++ L L+ Sbjct: 260 PPFMDGPHLWENTGKLVLMSKLLPKLMAQDSRVLIFSQMTRMLDILEDY 308 >gi|255560782|ref|XP_002521404.1| DNA repair helicase rad5,16, putative [Ricinus communis] gi|223539303|gb|EEF40894.1| DNA repair helicase rad5,16, putative [Ricinus communis] Length = 1109 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 3/58 (5%), Positives = 11/58 (18%), Gaps = 6/58 (10%) Query: 4 YHKFQRELYCDLQGE------NIEAFNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 Y + + + + N ++ Q + + Sbjct: 996 YTQLENDSRAQFREYAAAGTVKQNYVNILLMLLRLRQACDHPLLVRGIDSNLFGRSSM 1053 >gi|148359836|ref|YP_001251043.1| ATP-dependent RNA helicase [Legionella pneumophila str. Corby] gi|148281609|gb|ABQ55697.1| ATP-dependent RNA helicase [Legionella pneumophila str. Corby] Length = 958 Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G T+ + + E +L G N Q+ + L+ F L + + + Sbjct: 522 FHEGLTIIERDRAAAYFAEQENGAQVLVCS-EIGSEGRNFQF-SHHLILFDLPLNPDLLE 579 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 Q I R+ + G + ++ T E + + Sbjct: 580 QRIGRLD-----RIGQNHPIEIHVPYLAGTAQEKLFR 611 >gi|55379328|ref|YP_137178.1| Hef nuclease [Haloarcula marismortui ATCC 43049] gi|55232053|gb|AAV47472.1| ATP-dependent RNA helicase homolog eIF-4A [Haloarcula marismortui ATCC 43049] Length = 852 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 10/109 (9%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T + T+ + G+ +L + GL++ ++++F+ Q R Sbjct: 412 GMTQTQQQETLDRFRNGEFEVLV-STSVAEEGLDVPEV-DLVLFYEPVPTAIRAIQRKGR 469 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALK 199 G + + V L+A++T DE + R LN LK Sbjct: 470 TGRQAEGR--------VVVLLAEDTRDEAYFWKARNDQKRMKRELNELK 510 >gi|54295138|ref|YP_127553.1| ATP-dependent helicase HepA [Legionella pneumophila str. Lens] gi|53754970|emb|CAH16458.1| RNA polymerase-associated protein HepA [Legionella pneumophila str. Lens] Length = 958 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G T+ + + E +L G N Q+ + LV F L + + + Sbjct: 522 FHEGLTIIERDRAAAYFAEQENGAQVLVCS-EIGSEGRNFQF-SHHLVLFDLPLNPDLLE 579 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 Q I R+ + G + ++ T E + + Sbjct: 580 QRIGRLD-----RIGQNHPIEIHVPYLAGTAQEKLFR 611 >gi|296107886|ref|YP_003619587.1| ATP-dependent helicase HepA [Legionella pneumophila 2300/99 Alcoy] gi|295649788|gb|ADG25635.1| ATP-dependent helicase HepA [Legionella pneumophila 2300/99 Alcoy] Length = 958 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G T+ + + E +L G N Q+ + LV F L + + + Sbjct: 522 FHEGLTIIERDRAAAYFAEQENGAQVLVCS-EIGSEGRNFQF-SHHLVLFDLPLNPDLLE 579 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 Q I R+ + G + ++ T E + + Sbjct: 580 QRIGRLD-----RIGQNHPIEIHVPYLAGTAQEKLFR 611 >gi|269961316|ref|ZP_06175682.1| RNA polymerase-associated protein rapA [Vibrio harveyi 1DA3] gi|269833982|gb|EEZ88075.1| RNA polymerase-associated protein rapA [Vibrio harveyi 1DA3] Length = 969 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 9/90 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + EG +L G N Q+ N LV F L ++ + + Sbjct: 536 FHEGMSILERDKAAAYFAQEEGGAQVLICS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLE 593 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 Q I R+ + G KR + ++ + T Sbjct: 594 QRIGRLD-----RIGQKRDIDIHVPYLKGT 618 >gi|153835571|ref|ZP_01988238.1| RNA polymerase-associated protein RapA [Vibrio harveyi HY01] gi|148867846|gb|EDL67075.1| RNA polymerase-associated protein RapA [Vibrio harveyi HY01] Length = 969 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 9/90 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + EG +L G N Q+ N LV F L ++ + + Sbjct: 536 FHEGMSILERDKAAAYFAQEEGGAQVLICS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLE 593 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 Q I R+ + G KR + ++ + T Sbjct: 594 QRIGRLD-----RIGQKRDIDIHVPYLKGT 618 >gi|307611138|emb|CBX00782.1| RNA polymerase-associated protein HepA [Legionella pneumophila 130b] Length = 958 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G T+ + + E +L G N Q+ + LV F L + + + Sbjct: 522 FHEGLTIIERDRAAAYFAEQENGAQVLVCS-EIGSEGRNFQF-SHHLVLFDLPLNPDLLE 579 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 Q I R+ + G + ++ T E + + Sbjct: 580 QRIGRLD-----RIGQNHPIEIHVPYLAGTAQEKLFR 611 >gi|260904266|ref|ZP_05912588.1| type III restriction protein res subunit [Brevibacterium linens BL2] Length = 544 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 45/141 (31%), Gaps = 11/141 (7%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYHFNSDLA-----RLQKAFPQGRTLDKDPCTIQEWNE 106 D K+ + ++ A I+V + L + +++ Sbjct: 396 SDAKLPIVRELVADHPKAQILVIGQYLDQLEEVGRELDAPVLTGQTPESQRQELFRDFRS 455 Query: 107 GKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVF 166 G IP+L ++L + + +E Q + RI ++ Sbjct: 456 GAIPVLVVS-KVANFSVDLPAASVAIQVSGAFGSRQEEAQRLGRILRPKEDSGSATF--- 511 Query: 167 VYYLIAQNTIDELVLQRLRTK 187 Y ++A +T+DE R + Sbjct: 512 -YTVVAADTVDEH-FAAQRRR 530 >gi|170739571|ref|YP_001768226.1| type III restriction protein res subunit [Methylobacterium sp. 4-46] gi|168193845|gb|ACA15792.1| type III restriction protein res subunit [Methylobacterium sp. 4-46] Length = 476 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 33/104 (31%), Gaps = 12/104 (11%) Query: 82 ARLQKAFPQGRTLDKDPCTIQ-EWNEGKIP--LLFAHPASCGHGLNLQ--YGGNILVFFS 136 R + G + + ++ G + + + H L LV Sbjct: 342 QRWRVGEINGERPAEANEATRLDFQRGLLDALVFTVTESISLHRHELPGGERPRALVVHD 401 Query: 137 LWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELV 180 + + QQ+ R Q +YY A++T++E + Sbjct: 402 MRHSAIQLQQIEGRCHRDGQHA-------VIYYAYAEDTVEERI 438 >gi|54298189|ref|YP_124558.1| ATP-dependent helicase HepA [Legionella pneumophila str. Paris] gi|53751974|emb|CAH13400.1| RNA polymerase-associated protein HepA [Legionella pneumophila str. Paris] Length = 958 Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G T+ + + E +L G N Q+ + LV F L + + + Sbjct: 522 FHEGLTIIERDRAAAYFAEQENGAQVLVCS-EIGSEGRNFQF-SHHLVLFDLPLNPDLLE 579 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQ 182 Q I R+ + G + ++ T E + + Sbjct: 580 QRIGRLD-----RIGQNHPIEIHVPYLAGTAQEKLFR 611 >gi|149238864|ref|XP_001525308.1| hypothetical protein LELG_03236 [Lodderomyces elongisporus NRRL YB-4239] gi|152013494|sp|A5E0U9|DBP8_LODEL RecName: Full=ATP-dependent RNA helicase DBP8 gi|146450801|gb|EDK45057.1| hypothetical protein LELG_03236 [Lodderomyces elongisporus NRRL YB-4239] Length = 444 Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 17/158 (10%), Positives = 45/158 (28%), Gaps = 11/158 (6%) Query: 39 AVYYDEEKHWKEVHDEKIKALEVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDP 98 Y E + K + ++ V L + + Sbjct: 237 PSYVKEAYLTSILKLPKYEESTAVVFVNRTMTAEVLRRMLRKLEFKVASLHSEMPQTERT 296 Query: 99 CTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 ++ + G +L A + ++V F + D ++ + R ++ Sbjct: 297 NSLHRFKAGAARILIATDVASRGLDI--PTVELVVNFDIPADPDDFIHRVGRTARAGRKG 354 Query: 159 AGFKRAVFVYYLIAQNTID--ELVLQRLRTKSTIQDLL 194 +I + I+ E + +R+ K + + + Sbjct: 355 DA-------ISIIGEKDIERIESIEERINKKMELLEGV 385 >gi|302843304|ref|XP_002953194.1| hypothetical protein VOLCADRAFT_93875 [Volvox carteri f. nagariensis] gi|300261581|gb|EFJ45793.1| hypothetical protein VOLCADRAFT_93875 [Volvox carteri f. nagariensis] Length = 1876 Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 8/85 (9%) Query: 95 DKDPCTIQEWN-EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGV 153 +K + + + +L GL+L + ++ D+ QQ++ R Sbjct: 1509 EKREEALSRFQHDPHCGVLVM-DQLGAVGLDL-SFVSYVLLMEPLEDVSLEQQVVSR--- 1563 Query: 154 TRQRQAGFKRAVFVYYLIAQNTIDE 178 + G +RAV V L+ + + +E Sbjct: 1564 --AHRMGARRAVEVETLVMRGSAEE 1586 >gi|160932541|ref|ZP_02079931.1| hypothetical protein CLOLEP_01379 [Clostridium leptum DSM 753] gi|156868500|gb|EDO61872.1| hypothetical protein CLOLEP_01379 [Clostridium leptum DSM 753] Length = 412 Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 7/124 (5%) Query: 68 AAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIP--LLFAHPASCGHGLNL 125 +IV Y+F+ +L L+ + + + + + G N Sbjct: 279 HPKMIVFYNFDYELDILKNLYYGENVEIAEWNGHKHQPIPTCDSWVYLVQYTAGAEGWNC 338 Query: 126 QYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLR 185 I+ F+S + + +Q R + ++ Y+L +++ ID + + L Sbjct: 339 ISTDTIV-FYSQNYSYKIMKQSAGRTDRLNTP----FKDLYYYHLKSRSGIDLAISRALS 393 Query: 186 TKST 189 K Sbjct: 394 EKRN 397 >gi|90411937|ref|ZP_01219945.1| ATP-dependent helicase HepA [Photobacterium profundum 3TCK] gi|90327195|gb|EAS43567.1| ATP-dependent helicase HepA [Photobacterium profundum 3TCK] Length = 972 Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 20/137 (14%) Query: 52 HDEKIKALEVIIEKANAAPIIVAYH-----------FNSDLARLQKAFPQGRTLDKDPCT 100 D ++ L +++ ++V F +G ++ + Sbjct: 490 FDPRVNWLLDMLKANRNEKVLVICSRAQTALTLEQALREREGIRATVFHEGMSIIERDKA 549 Query: 101 IQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQ 158 + + +L G N Q+ N LV F L + + +Q I R+ + Sbjct: 550 AAYFAQEDDGAQVLLCS-EIGSEGRNFQF-ANQLVMFDLPNNPDLLEQRIGRLD-----R 602 Query: 159 AGFKRAVFVYYLIAQNT 175 G +R + ++ + T Sbjct: 603 IGQQRDIEIHVPHLEGT 619 >gi|153843859|ref|ZP_01993600.1| RNA polymerase-associated protein RapA [Vibrio parahaemolyticus AQ3810] gi|149745283|gb|EDM56534.1| RNA polymerase-associated protein RapA [Vibrio parahaemolyticus AQ3810] Length = 260 Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + EG +L G N Q+ N LV F L ++ + + Sbjct: 70 FHEGMSILERDKAAAYFAQEEGGAQVLICS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLE 127 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 Q I R+ + G R + ++ + T Sbjct: 128 QRIGRLD-----RIGQNRDIDIHVPYLKGT 152 >gi|153840670|ref|ZP_01993337.1| RNA polymerase-associated protein RapA [Vibrio parahaemolyticus AQ3810] gi|149745658|gb|EDM56797.1| RNA polymerase-associated protein RapA [Vibrio parahaemolyticus AQ3810] Length = 416 Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + EG +L G N Q+ N LV F L ++ + + Sbjct: 206 FHEGMSILERDKAAAYFAQEEGGAQVLICS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLE 263 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 Q I R+ + G R + ++ + T Sbjct: 264 QRIGRLD-----RIGQNRDIDIHVPYLKGT 288 >gi|67763822|ref|NP_659208.2| helicase-like transcription factor isoform 2 [Mus musculus] gi|148702944|gb|EDL34891.1| mCG123397, isoform CRA_b [Mus musculus] Length = 841 Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 18/80 (22%), Gaps = 7/80 (8%) Query: 2 KQYHKFQRELYCDLQ----GENIEA--FNSASKTVKCLQLANGAVYYDEEKHWKEVHDEK 55 K Y + E + + A + ++ Q+ Sbjct: 670 KIYQSVKNEGKAAIGRYFTEGTVLAHYADVLGLLLRLRQICCHTHLLT-NGMSSSGPSRS 728 Query: 56 IKALEVIIEKANAAPIIVAY 75 E+ II++ Sbjct: 729 DTPEELRKMLIEKMKIILSS 748 >gi|313125011|ref|YP_004035275.1| ercc4-like helicase [Halogeometricum borinquense DSM 11551] gi|312291376|gb|ADQ65836.1| ERCC4-like helicase [Halogeometricum borinquense DSM 11551] Length = 843 Score = 36.3 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 10/110 (9%) Query: 91 GRTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIER 150 G T + T+ E+ G+ +L + GL++ ++++FF Q R Sbjct: 411 GMTQKEQQETLDEFRNGEFEVLV-STSVAEEGLDVPEV-DLVLFFEPVPTAIRSIQRKGR 468 Query: 151 IGVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKK 200 G + + V L+A+NT DE R + L LK Sbjct: 469 TGRQAEGR--------VIVLMAENTRDEAYFWISRRREKEMKSELRDLKG 510 >gi|47180147|emb|CAG13957.1| unnamed protein product [Tetraodon nigroviridis] Length = 110 Score = 36.3 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 15/106 (14%) Query: 52 HDEKIKALEVIIEK--ANAAPIIVAYHFNSDLARLQKAFPQGRTLD----------KDPC 99 K + L+ I+ K A +++ S + ++ F Sbjct: 5 SSGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGL 64 Query: 100 TIQEWNEGKI--PLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEE 143 ++ +N+ + + G GLNL + +V F W+ + Sbjct: 65 LLKTFNDPASEYFVFLLSTRAGGLGLNLHS-ADTVVIFDSDWNPHQ 109 >gi|254229273|ref|ZP_04922691.1| type III restriction enzyme, res subunit family [Vibrio sp. Ex25] gi|262393165|ref|YP_003285019.1| RNA polymerase associated protein RapA [Vibrio sp. Ex25] gi|151938197|gb|EDN57037.1| type III restriction enzyme, res subunit family [Vibrio sp. Ex25] gi|262336759|gb|ACY50554.1| RNA polymerase associated protein RapA [Vibrio sp. Ex25] Length = 969 Score = 36.3 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Query: 88 FPQGRTLDKDPCTIQEW--NEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQ 145 F +G ++ + + EG +L G N Q+ N LV F L ++ + + Sbjct: 536 FHEGMSILERDKAAAYFAQEEGGAQVLICS-EIGSEGRNFQF-ANQLVMFDLPFNPDLLE 593 Query: 146 QMIERIGVTRQRQAGFKRAVFVYYLIAQNT 175 Q I R+ + G R + ++ + T Sbjct: 594 QRIGRLD-----RIGQNRDIDIHIPYLKGT 618 >gi|170730594|ref|YP_001776027.1| hypothetical protein Xfasm12_1481 [Xylella fastidiosa M12] gi|167965387|gb|ACA12397.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 45 Score = 36.3 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 15/31 (48%), Positives = 22/31 (70%) Query: 171 IAQNTIDELVLQRLRTKSTIQDLLLNALKKE 201 +A T+DELV+ R +K +QDLLL A+K+ Sbjct: 1 MAAGTVDELVMARRESKREVQDLLLEAVKRR 31 >gi|154310415|ref|XP_001554539.1| hypothetical protein BC1G_07127 [Botryotinia fuckeliana B05.10] gi|150851459|gb|EDN26652.1| hypothetical protein BC1G_07127 [Botryotinia fuckeliana B05.10] Length = 2323 Score = 36.3 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 30/77 (38%), Gaps = 2/77 (2%) Query: 106 EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFK--R 163 + +LF A + ++F + ++ ++ + R + G Sbjct: 2214 DPTARILFLDIADESAAGSNLTVAQHIIFLTPYFAEKQKYNSSMTQAMGRAIRQGQAPGS 2273 Query: 164 AVFVYYLIAQNTIDELV 180 V V++L+ Q++++ + Sbjct: 2274 TVTVHHLLVQDSVETDI 2290 >gi|41615176|ref|NP_963674.1| Hef nuclease [Nanoarchaeum equitans Kin4-M] gi|40068900|gb|AAR39235.1| NEQ387 [Nanoarchaeum equitans Kin4-M] Length = 667 Score = 36.3 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 10/111 (9%) Query: 92 RTLDKDPCTIQEWNEGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 T K T+ ++ +L A + GL++ ++++F+ Q R Sbjct: 352 MTQKKQIETLDKFRANIYNVLVAS-SVAEEGLDIPKV-DLVIFYEPIPSAIRAIQRKGRT 409 Query: 152 GVTRQRQAGFKRAVFVYYLIAQNTIDELVLQRLRTKSTIQDLLLNALKKET 202 G V L ++NT+DE L K +L L KE Sbjct: 410 GRLNYG--------EVIILYSKNTLDEKALWASIRKEKKMYEILEKLSKEV 452 >gi|324571333|gb|ADY49918.1| Transcription activator BRG1 [Ascaris suum] Length = 71 Score = 36.3 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 6/65 (9%) Query: 97 DPCTIQEWN-----EGKIPLLFAHPASCGHGLNLQYGGNILVFFSLWWDLEEHQQMIERI 151 + W + + + G GLNLQ + ++ F W+ + Q +R Sbjct: 6 RTNVVNFWRCTMRLNSEYFIFILSTRAGGLGLNLQT-ADTVIIFDSDWNPHQDMQAQDRA 64 Query: 152 GVTRQ 156 Q Sbjct: 65 HRIGQ 69 >gi|290977144|ref|XP_002671298.1| predicted protein [Naegleria gruberi] gi|284084866|gb|EFC38554.1| predicted protein [Naegleria gruberi] Length = 1033 Score = 36.3 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 49/191 (25%), Gaps = 27/191 (14%) Query: 15 LQGENIEAFNSASKTVKCLQL---ANGAVYYDEEKHWKEVH------------DEKIKAL 59 +N N QL N + + H K+ L Sbjct: 433 FDEKNYSKENKDRLIRAYQQLSNACNHPYLNIASEDEPQRHDPVAYFNTYLQASPKLLVL 492 Query: 60 EVIIEKANAAPIIVAYHFNSDLARLQKAFPQGRTLDKDPCTIQEWNEGKIPLLFAHPASC 119 E ++EK + +I+ F + + + ++ N + Sbjct: 493 ERLLEKFSQQNVIIFSSFPCIIEEMLIQQKKNYSIITSENV----NNVTTEKIVLIYHKT 548 Query: 120 GHGLNLQYGGNILVFFSLWWDLEEHQQMIERIGVTRQRQAGFKRAVFVYYLIAQNTIDEL 179 + ++ F W+