HHsearch alignment for GI: 254780132 and conserved domain: COG0466

>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].
Probab=96.91  E-value=0.0013  Score=42.69  Aligned_cols=84  Identities=24%  Similarity=0.408  Sum_probs=44.9

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCC--EEEEEEECCCCCC-CCCCCCCCHHHC---CHHHHHHHHCCC----EEE--E
Q ss_conf             719999879999989999999851898--1799860278889-883346420100---145542210278----187--6
Q gi|254780132|r    2 AHIFVLIGASGVGKTTIAKQVVLNSEY--LVMPVGVTTRRPR-VDEKQYIDYRFI---SQSQFKGWKHTG----LFI--E   69 (186)
Q Consensus         2 ~kiivi~GpsGsGK~tl~~~L~~~~~~--~~~~v~~TTR~~R-~~E~~g~dY~Fv---s~~~F~~~i~~~----~Fi--E   69 (186)
T Consensus       350 GpILcLVGPPGVGKTSLgkSIA~al~RkfvR~sLG----GvrDEAEIRGHRRTYIGaMPGrIiQ~mkka~~~NPv~LLDE  425 (782)
T COG0466         350 GPILCLVGPPGVGKTSLGKSIAKALGRKFVRISLG----GVRDEAEIRGHRRTYIGAMPGKIIQGMKKAGVKNPVFLLDE  425 (782)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECC----CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC
T ss_conf             85799978998870118999999958977999547----65427775355312335687289999998677687478640


Q ss_pred             EEEECCCEEEEECCCHHHHH
Q ss_conf             66612870454422002334
Q gi|254780132|r   70 TTKVRDEYYGYLKEDINNPM   89 (186)
Q Consensus        70 ~~~~~g~~YGts~~~i~~~~   89 (186)
T Consensus       426 IDKm~ss~rGDPaSALLEVL  445 (782)
T COG0466         426 IDKMGSSFRGDPASALLEVL  445 (782)
T ss_pred             HHHCCCCCCCCHHHHHHHHC
T ss_conf             33316777788688888626