HHsearch alignment for GI: 254780132 and conserved domain: COG0466
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].
Probab=96.91 E-value=0.0013 Score=42.69 Aligned_cols=84 Identities=24% Similarity=0.408 Sum_probs=44.9
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCC--EEEEEEECCCCCC-CCCCCCCCHHHC---CHHHHHHHHCCC----EEE--E
Q ss_conf 719999879999989999999851898--1799860278889-883346420100---145542210278----187--6
Q gi|254780132|r 2 AHIFVLIGASGVGKTTIAKQVVLNSEY--LVMPVGVTTRRPR-VDEKQYIDYRFI---SQSQFKGWKHTG----LFI--E 69 (186)
Q Consensus 2 ~kiivi~GpsGsGK~tl~~~L~~~~~~--~~~~v~~TTR~~R-~~E~~g~dY~Fv---s~~~F~~~i~~~----~Fi--E 69 (186)
T Consensus 350 GpILcLVGPPGVGKTSLgkSIA~al~RkfvR~sLG----GvrDEAEIRGHRRTYIGaMPGrIiQ~mkka~~~NPv~LLDE 425 (782)
T COG0466 350 GPILCLVGPPGVGKTSLGKSIAKALGRKFVRISLG----GVRDEAEIRGHRRTYIGAMPGKIIQGMKKAGVKNPVFLLDE 425 (782)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECC----CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC
T ss_conf 85799978998870118999999958977999547----65427775355312335687289999998677687478640
Q ss_pred EEEECCCEEEEECCCHHHHH
Q ss_conf 66612870454422002334
Q gi|254780132|r 70 TTKVRDEYYGYLKEDINNPM 89 (186)
Q Consensus 70 ~~~~~g~~YGts~~~i~~~~ 89 (186)
T Consensus 426 IDKm~ss~rGDPaSALLEVL 445 (782)
T COG0466 426 IDKMGSSFRGDPASALLEVL 445 (782)
T ss_pred HHHCCCCCCCCHHHHHHHHC
T ss_conf 33316777788688888626