HHsearch alignment for GI: 254780132 and conserved domain: KOG3220
>KOG3220 consensus.
Probab=96.83 E-value=0.0039 Score=39.84 Aligned_cols=162 Identities=19% Similarity=0.185 Sum_probs=80.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCEEEE-EEECCCCCC-C-------------CCC---CCC-------CHHHCCHHHH
Q ss_conf 99998799999899999998518981799-860278889-8-------------833---464-------2010014554
Q gi|254780132|r 4 IFVLIGASGVGKTTIAKQVVLNSEYLVMP-VGVTTRRPR-V-------------DEK---QYI-------DYRFISQSQF 58 (186)
Q Consensus 4 iivi~GpsGsGK~tl~~~L~~~~~~~~~~-v~~TTR~~R-~-------------~E~---~g~-------dY~Fvs~~~F 58 (186)
T Consensus 3 iVGLTGgiatGKStVs~~f~-~~-G~~vIDaD~vaR~vv~PG~p~~~~ive~FG~eiLl~~G~inR~~LG~~vF-~~~~~ 79 (225)
T KOG3220 3 IVGLTGGIATGKSTVSQVFK-AL-GIPVIDADVVAREVVEPGTPAYRRIVEAFGTEILLEDGEINRKVLGKRVF-SDPKK 79 (225)
T ss_pred EEEEECCCCCCHHHHHHHHH-HC-CCCEECHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCCCHHHHHHHHH-CCHHH
T ss_conf 99940565667379999999-74-99576278999998559980789999984840005688416899867870-89889
Q ss_pred HHHHCCCEEEEEEEECCCEEEEECCCHHHHHHHCC-CCCCCCCCCHHH-HHHHCCCCCEEEEHCCCCCHHHHHHHHHHCC
Q ss_conf 22102781876666128704544220023343102-420025420002-4442054320000002321899998762014
Q gi|254780132|r 59 KGWKHTGLFIETTKVRDEYYGYLKEDINNPMEHGY-DILLILTHQGLA-PLKKLYEDQVTSIFIAPPSEAELIQRRIKRR 136 (186)
Q Consensus 59 ~~~i~~~~FiE~~~~~g~~YGts~~~i~~~~~~g~-~~il~id~~G~~-~lk~~~~~~~~~IfI~pps~~~L~~RL~~R~ 136 (186)
T Consensus 80 r~~Ln~---IthP~I---r~em~-ke~~~~~l~G~r~ivlDiPLL-FE~~~~~~~-~~tvvV~c--d-~~~Ql~Rl~~Rd 147 (225)
T KOG3220 80 RQALNK---ITHPAI---RKEMF-KEILKLLLRGYRVIVLDIPLL-FEAKLLKIC-HKTVVVTC--D-EELQLERLVERD 147 (225)
T ss_pred HHHHHH---CCCHHH---HHHHH-HHHHHHHHCCCEEEEEECHHH-HHHHHHHHE-EEEEEEEE--C-CHHHHHHHHHHC
T ss_conf 999873---133899---99999-999999966882899922688-887677453-25899998--9-089999998744
Q ss_pred CCCHHHHHHHHHH------HHHCCCEEEECC-CHHHHHHHHHHHHHHHHHC
Q ss_conf 5448999999998------653598899939-7899999999999999730
Q gi|254780132|r 137 EDIPFNLDPDLFG------KNHSYSFTIVNN-HLPTACRQVGLIREFVKRG 180 (186)
Q Consensus 137 ~e~~~~i~~r~~~------~~~~fD~iIiNd-dle~a~~~l~~Iie~l~~~ 180 (186)
T Consensus 148 ~lse~dAe~Rl~sQmp~~~k~~~a~~Vi~Nng~~~~l~~qv~~v~~~~~~s 198 (225)
T KOG3220 148 ELSEEDAENRLQSQMPLEKKCELADVVIDNNGSLEDLYEQVEKVLALLQKS 198 (225)
T ss_pred CCCHHHHHHHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCH
T ss_conf 646999998987329878999863164217998689999999999985331