HHsearch alignment for GI: 254780132 and conserved domain: PRK09183
>PRK09183 transposase/IS protein; Provisional.
Probab=96.43 E-value=0.0019 Score=41.70 Aligned_cols=35 Identities=37% Similarity=0.425 Sum_probs=23.1
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 19999879999989999999851898179986027
Q gi|254780132|r 3 HIFVLIGASGVGKTTIAKQVVLNSEYLVMPVGVTT 37 (186)
Q Consensus 3 kiivi~GpsGsGK~tl~~~L~~~~~~~~~~v~~TT 37 (186)
T Consensus 102 ~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~ 136 (258)
T PRK09183 102 ENIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTT 136 (258)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 86799899998689999999999998799399978